tcga_participant_barcode CLI_years_to_birth CLI_vital_status CLI_days_to_death CLI_days_to_last_followup CLI_tumor_tissue_site CLI_pathologic_stage CLI_pathology_T_stage CLI_pathology_N_stage CLI_pathology_M_stage CLI_gender CLI_date_of_initial_pathologic_diagnosis CLI_days_to_last_known_alive CLI_radiation_therapy CLI_histological_type CLI_number_of_lymph_nodes CLI_race CLI_ethnicity CLUS_mRNA_cNMF CLUS_mRNA_cHierarchical CLUS_CN_cNMF CLUS_Methlyation_cNMF CLUS_RPPA_cNMF CLUS_RPPA_cHierarchical CLUS_mRNAseq_cNMF CLUS_mRNAseq_cHierarchical CLUS_miRseq_cNMF CLUS_miRseq_cHierarchical CLUS_miRseq_Mature_cNMF CLUS_miRseq_Mature_cHierarchical SMG_mutsig2.0_ACTL6B SMG_mutsig2.0_APC_cosmic SMG_mutsig2.0_AQP12A SMG_mutsig2.0_ASXL2 SMG_mutsig2.0_CASP8 SMG_mutsig2.0_CBFB SMG_mutsig2.0_CDH1 SMG_mutsig2.0_CDKN1B SMG_mutsig2.0_CTCF SMG_mutsig2.0_ERBB2 SMG_mutsig2.0_FAM20C SMG_mutsig2.0_FAM86B1 SMG_mutsig2.0_FBXW7 SMG_mutsig2.0_FGFR2_cosmic SMG_mutsig2.0_FOXA1 SMG_mutsig2.0_GATA3 SMG_mutsig2.0_GPRIN2 SMG_mutsig2.0_GPS2 SMG_mutsig2.0_HIST1H2BC SMG_mutsig2.0_HIST1H3B SMG_mutsig2.0_HLA-DRB5 SMG_mutsig2.0_KRAS SMG_mutsig2.0_MAP2K4 SMG_mutsig2.0_MAP3K1 SMG_mutsig2.0_MYB SMG_mutsig2.0_NCOR1 SMG_mutsig2.0_PIK3CA SMG_mutsig2.0_PIK3R1 SMG_mutsig2.0_PIWIL1 SMG_mutsig2.0_PTEN SMG_mutsig2.0_PTGER2 SMG_mutsig2.0_PTPN22_cosmic SMG_mutsig2.0_RAB42 SMG_mutsig2.0_RB1 SMG_mutsig2.0_RUNX1 SMG_mutsig2.0_SF3B1 SMG_mutsig2.0_SMAD2_cosmic SMG_mutsig2.0_SMAD4_cosmic SMG_mutsig2.0_TAF1L_cosmic SMG_mutsig2.0_TBL1XR1 SMG_mutsig2.0_TBX3 SMG_mutsig2.0_TCP10 SMG_mutsig2.0_TNFSF8 SMG_mutsig2.0_TP53 SMG_mutsig2.0_VCPIP1_cosmic SMG_mutsig2.0_WSCD2 SMG_mutsig2.0_ZFP36L1 SMG_mutsig2.0_ZFP36L2 SMG_mutsig2.0_ZP4 SMG_mutsig.CV_ANKRD12 SMG_mutsig.CV_APC_cosmic SMG_mutsig.CV_AQP12A SMG_mutsig.CV_ARID1A SMG_mutsig.CV_CASP8 SMG_mutsig.CV_CBFB SMG_mutsig.CV_CDH1 SMG_mutsig.CV_CDKN1B SMG_mutsig.CV_COL6A5 SMG_mutsig.CV_CTCF SMG_mutsig.CV_DNAH12 SMG_mutsig.CV_ERBB2_cosmic SMG_mutsig.CV_FAM86B1 SMG_mutsig.CV_FBXW7 SMG_mutsig.CV_FGFR2_cosmic SMG_mutsig.CV_FOXA1 SMG_mutsig.CV_GATA3 SMG_mutsig.CV_GPRIN2 SMG_mutsig.CV_GPS2 SMG_mutsig.CV_GRHL2 SMG_mutsig.CV_HIST1H3B SMG_mutsig.CV_HMGB3 SMG_mutsig.CV_HRNR SMG_mutsig.CV_ICOSLG SMG_mutsig.CV_KRAS_cosmic SMG_mutsig.CV_MAP2K4 SMG_mutsig.CV_MAP3K1 SMG_mutsig.CV_MYB SMG_mutsig.CV_MYH9 SMG_mutsig.CV_NCOR1 SMG_mutsig.CV_NF1 SMG_mutsig.CV_OR2T35 SMG_mutsig.CV_PIK3CA SMG_mutsig.CV_PIK3R1 SMG_mutsig.CV_PTEN SMG_mutsig.CV_PTPN22_cosmic SMG_mutsig.CV_RB1 SMG_mutsig.CV_RUNX1 SMG_mutsig.CV_SHISA4 SMG_mutsig.CV_SMAD2_cosmic SMG_mutsig.CV_SMAD4_cosmic SMG_mutsig.CV_TAF1L_cosmic SMG_mutsig.CV_TBL1XR1 SMG_mutsig.CV_TBX3 SMG_mutsig.CV_TMEM151B SMG_mutsig.CV_TP53 SMG_mutsig.CV_VCPIP1_cosmic SMG_mutsig.CV_ZFP36L1 SMG_mutsig.CV_ZFP36L2 SMG_mutsig.2CV_ACTL6B SMG_mutsig.2CV_APC_cosmic SMG_mutsig.2CV_AQP12A SMG_mutsig.2CV_ARID1A SMG_mutsig.2CV_C17orf95 SMG_mutsig.2CV_CASZ1 SMG_mutsig.2CV_CBFB SMG_mutsig.2CV_CDC42EP1 SMG_mutsig.2CV_CDH1 SMG_mutsig.2CV_CDKN1B SMG_mutsig.2CV_CTCF SMG_mutsig.2CV_ERBB2 SMG_mutsig.2CV_EYS SMG_mutsig.2CV_FBXW7 SMG_mutsig.2CV_FGFR2 SMG_mutsig.2CV_FOXA1 SMG_mutsig.2CV_FRMPD2 SMG_mutsig.2CV_GATA3 SMG_mutsig.2CV_GPRIN2 SMG_mutsig.2CV_GPS2 SMG_mutsig.2CV_HRNR SMG_mutsig.2CV_ICOSLG SMG_mutsig.2CV_IL1RAP SMG_mutsig.2CV_IRS4 SMG_mutsig.2CV_KCNN3 SMG_mutsig.2CV_KDM6A SMG_mutsig.2CV_KRAS SMG_mutsig.2CV_MAP2K4 SMG_mutsig.2CV_MAP3K1 SMG_mutsig.2CV_MED23 SMG_mutsig.2CV_MLL3 SMG_mutsig.2CV_MUC6 SMG_mutsig.2CV_MYB SMG_mutsig.2CV_MYH9 SMG_mutsig.2CV_NBPF9 SMG_mutsig.2CV_NCDN SMG_mutsig.2CV_NCOR1 SMG_mutsig.2CV_NF1 SMG_mutsig.2CV_NLGN3 SMG_mutsig.2CV_PAX2 SMG_mutsig.2CV_PIK3CA SMG_mutsig.2CV_PIK3R1_cosmic SMG_mutsig.2CV_PTEN SMG_mutsig.2CV_PTPN22_cosmic SMG_mutsig.2CV_RAB42 SMG_mutsig.2CV_RB1 SMG_mutsig.2CV_RBMX SMG_mutsig.2CV_RUFY1 SMG_mutsig.2CV_RUNX1 SMG_mutsig.2CV_SF3B1 SMG_mutsig.2CV_SMAD2_cosmic SMG_mutsig.2CV_SMAD4_cosmic SMG_mutsig.2CV_SP3 SMG_mutsig.2CV_SPEN SMG_mutsig.2CV_TAF1L_cosmic SMG_mutsig.2CV_TBL1XR1 SMG_mutsig.2CV_TBX3 SMG_mutsig.2CV_TCP11 SMG_mutsig.2CV_TFE3 SMG_mutsig.2CV_TGS1 SMG_mutsig.2CV_TP53 SMG_mutsig.2CV_TPP2 SMG_mutsig.2CV_USP36 SMG_mutsig.2CV_VCPIP1_cosmic SMG_mutsig.2CV_ZBTB7C SMG_mutsig.2CV_ZFP36L1 SMG_mutsig.2CV_ZFP36L2 SMG_mutsig.2CV_ZMYM3 SMG_mutsig.2CV_ZNF362 rate_non rate_sil MutsigCateg_*CpG->T MutsigCateg_Tp*Cp(A/C/T)->mut MutsigCateg_*CpG->(G/A) MutsigCateg_(A/C/G)p*Cp(A/C/T)->mut MutsigCateg_A->mut SMG_ANKRD12_mRNA SMG_APC_mRNA SMG_ARID1A_mRNA SMG_ASXL2_mRNA SMG_C17orf95_mRNA SMG_CASP8_mRNA SMG_CASZ1_mRNA SMG_CBFB_mRNA SMG_CDC42EP1_mRNA SMG_CDH1_mRNA SMG_CDKN1B_mRNA SMG_CTCF_mRNA SMG_DNAH12_mRNA SMG_ERBB2_mRNA SMG_EYS_mRNA SMG_FAM20C_mRNA SMG_FAM86B1_mRNA SMG_FBXW7_mRNA SMG_FGFR2_mRNA SMG_FOXA1_mRNA SMG_FRMPD2_mRNA SMG_GATA3_mRNA SMG_GPRIN2_mRNA SMG_GPS2_mRNA SMG_GRHL2_mRNA SMG_HIST1H2BC_mRNA SMG_HIST1H3B_mRNA SMG_HLA-DRB5_mRNA SMG_HMGB3_mRNA SMG_HRNR_mRNA SMG_ICOSLG_mRNA SMG_IL1RAP_mRNA SMG_IRS4_mRNA SMG_KCNN3_mRNA SMG_KDM6A_mRNA SMG_KRAS_mRNA SMG_MAP2K4_mRNA SMG_MAP3K1_mRNA SMG_MED23_mRNA SMG_MLL3_mRNA SMG_MUC6_mRNA SMG_MYB_mRNA SMG_MYH9_mRNA SMG_NBPF9_mRNA SMG_NCDN_mRNA SMG_NCOR1_mRNA SMG_NF1_mRNA SMG_NLGN3_mRNA SMG_PAX2_mRNA SMG_PIK3CA_mRNA SMG_PIK3R1_mRNA SMG_PIWIL1_mRNA SMG_PTEN_mRNA SMG_PTGER2_mRNA SMG_PTPN22_mRNA SMG_RAB42_mRNA SMG_RB1_mRNA SMG_RBMX_mRNA SMG_RUFY1_mRNA SMG_RUNX1_mRNA SMG_SF3B1_mRNA SMG_SHISA4_mRNA SMG_SMAD2_mRNA SMG_SMAD4_mRNA SMG_SP3_mRNA SMG_SPEN_mRNA SMG_TAF1L_mRNA SMG_TBL1XR1_mRNA SMG_TBX3_mRNA SMG_TCP11_mRNA SMG_TFE3_mRNA SMG_TGS1_mRNA SMG_TMEM151B_mRNA SMG_TNFSF8_mRNA SMG_TP53_mRNA SMG_TPP2_mRNA SMG_USP36_mRNA SMG_VCPIP1_mRNA SMG_WSCD2_mRNA SMG_ZBTB7C_mRNA SMG_ZFP36L1_mRNA SMG_ZFP36L2_mRNA SMG_ZMYM3_mRNA SMG_ZNF362_mRNA Amp_1q21.3 Amp_1q44 Amp_3p25.1 Amp_3q26.32 Amp_4q13.3 Amp_5p15.33 Amp_6p23 Amp_6q21 Amp_8p11.23 Amp_8p11.21 Amp_8q24.21 Amp_10p15.1 Amp_10q22.3 Amp_11p13 Amp_11q13.3 Amp_11q14.1 Amp_12p13.33 Amp_12q15 Amp_13q34 Amp_14q21.1 Amp_15q26.3 Amp_17p11.2 Amp_17q12 Amp_17q23.1 Amp_19p13.12 Amp_19q12 Amp_19q13.42 Amp_20q13.2 Del_1p36.13 Del_1p21.2 Del_2q37.3 Del_3p21.31 Del_4p16.3 Del_4q35.2 Del_5q11.2 Del_5q21.3 Del_6p25.3 Del_6q15 Del_6q27 Del_7p22.3 Del_7q36.1 Del_8p23.2 Del_9p23 Del_9p21.3 Del_9q21.11 Del_9q34.2 Del_10q23.31 Del_10q26.3 Del_11p15.5 Del_11q13.1 Del_11q23.3 Del_11q25 Del_12p13.1 Del_12q23.1 Del_12q24.31 Del_13q14.2 Del_14q24.1 Del_14q32.12 Del_15q13.1 Del_16q24.3 Del_17p12 Del_17q21.31 Del_18q23 Del_19p13.3 Del_19q13.32 Del_20p13 Del_21q11.2 Del_22q11.1 Del_22q13.32 CN_10p_Amp CN_10q_Amp CN_11p_Amp CN_11q_Amp CN_12p_Amp CN_12q_Amp CN_13q_Amp CN_14q_Amp CN_15q_Amp CN_16p_Amp CN_16q_Amp CN_17p_Amp CN_17q_Amp CN_18p_Amp CN_18q_Amp CN_19p_Amp CN_19q_Amp CN_1p_Amp CN_1q_Amp CN_20p_Amp CN_20q_Amp CN_21q_Amp CN_22q_Amp CN_2p_Amp CN_2q_Amp CN_3p_Amp CN_3q_Amp CN_4p_Amp CN_4q_Amp CN_5p_Amp CN_5q_Amp CN_6p_Amp CN_6q_Amp CN_7p_Amp CN_7q_Amp CN_8p_Amp CN_8q_Amp CN_9p_Amp CN_9q_Amp CN_Xp_Amp CN_Xq_Amp CN_10p_Del CN_10q_Del CN_11p_Del CN_11q_Del CN_12p_Del CN_12q_Del CN_13q_Del CN_14q_Del CN_15q_Del CN_16p_Del CN_16q_Del CN_17p_Del CN_17q_Del CN_18p_Del CN_18q_Del CN_19p_Del CN_19q_Del CN_1p_Del CN_1q_Del CN_20p_Del CN_20q_Del CN_21q_Del CN_22q_Del CN_2p_Del CN_2q_Del CN_3p_Del CN_3q_Del CN_4p_Del CN_4q_Del CN_5p_Del CN_5q_Del CN_6p_Del CN_6q_Del CN_7p_Del CN_7q_Del CN_8p_Del CN_8q_Del CN_9p_Del CN_9q_Del CN_Xp_Del CN_Xq_Del mRNA_CNMF_MTHFS_0.18_1 mRNA_CNMF_NKX2-2_-1.48_1 mRNA_CNMF_RBPMS2_-0.39_1 mRNA_CNMF_LZTS2_-0.21_1 mRNA_CNMF_SMARCD2_0.23_1 mRNA_CNMF_MYL5_0.31_1 mRNA_CNMF_ZBTB7B_-0.22_1 mRNA_CNMF_AKAP2_-0.4_1 mRNA_CNMF_RAB4B_0.23_1 mRNA_CNMF_CMA1_-0.87_2 mRNA_CNMF_SAT1_0.34_2 mRNA_CNMF_CTSA_0.23_2 mRNA_CNMF_GRIN2C_-0.65_2 mRNA_CNMF_DEFB132_-0.86_2 mRNA_CNMF_UBE2Q2P1_-0.47_2 mRNA_CNMF_ZNF286A_-0.27_2 mRNA_CNMF_PIPOX_0.53_2 mRNA_CNMF_APOL1_0.4_2 mRNA_CNMF_ZDHHC5_0.17_2 mRNA_CNMF_PIP5K1A_-0.18_3 mRNA_CNMF_APTX_-0.14_3 mRNA_CNMF_SP5_0.86_3 mRNA_CNMF_UPF3B_-0.18_3 mRNA_CNMF_HPS1_0.17_3 mRNA_CNMF_P2RY8_0.41_3 mRNA_CNMF_AKR1C2_0.74_3 mRNA_CNMF_GPR115_-0.88_3 mRNA_CNMF_SLC30A10_-0.73_3 mRNA_CNMF_SWAP70_0.19_4 mRNA_CNMF_MYRIP_0.57_4 mRNA_CNMF_UST_-0.44_4 mRNA_CNMF_CLPB_-0.19_4 mRNA_CNMF_CPAMD8_-0.61_4 mRNA_CNMF_TNK2_0.26_4 mRNA_CNMF_GATAD2B_0.18_4 mRNA_CNMF_P2RY12_0.59_4 mRNA_CNMF_POLD1_-0.25_4 mRNA_CNMF_SEC14L4_-1.03_4 mRNA_CNMF_CDC14B_0.35_5 mRNA_CNMF_EIF3L_0.21_5 mRNA_CNMF_AHSA2_-0.32_5 mRNA_CNMF_NDUFA4L2_0.64_5 mRNA_CNMF_RNASE3_0.49_5 mRNA_CNMF_CECR2_-0.88_5 mRNA_CNMF_TATDN3_-0.21_5 mRNA_CNMF_LDHC_0.84_5 mRNA_CNMF_FAM43B_-0.55_5 mRNA_CNMF_HSD3B2_-0.8_5 mRNA_CNMF_SH2D1A_1.23_6 mRNA_CNMF_POLN_0.73_6 mRNA_CNMF_GPR55_0.91_6 mRNA_CNMF_SHMT2_-0.33_6 mRNA_CNMF_KRT83_-1.4_6 mRNA_CNMF_MET_0.65_6 mRNA_CNMF_TRIM27_-0.19_6 mRNA_CNMF_PWP1_-0.2_6 mRNA_CNMF_TOX2_0.76_6 mRNA_CNMF_SEPT6_1.42_7 mRNA_CNMF_STAT1_1.74_7 mRNA_CNMF_CPVL_1.19_7 mRNA_CNMF_KCNJ10_2.99_7 mRNA_CNMF_RAB33A_1.73_7 mRNA_CNMF_ELP2_-0.78_7 mRNA_CNMF_MARCH4_-1.46_7 mRNA_CNMF_PRSS33_-2.05_7 mRNA_CNMF_PLA2G4D_-1.84_7 mRNA_CNMF_FZD9_-1.67_7 Amp_CCND1_11q13.3_mRNA Amp_CCNE1_19q12_mRNA Amp_COX18_4q13.3_mRNA Amp_ERBB2_17q12_mRNA Amp_ERCC5_13q34_mRNA Amp_FH_1q44_mRNA Amp_FOXA1_14q21.1_mRNA Amp_IGF1R_15q26.3_mRNA Amp_INTS4_11q14.1_mRNA Amp_KDM5A_12p13.33_mRNA Amp_MCL1_1q21.3_mRNA Amp_MYC_8q24.21_mRNA Amp_PIK3CA_3q26.32_mRNA Amp_SMYD3_1q44_mRNA Amp_TERT_5p15.33_mRNA Amp_TUBD1_17q23.1_mRNA Amp_ZNF217_20q13.2_mRNA Del_ABL1_9q34.2_mRNA Del_AKT1_14q32.12_mRNA Del_ANKS1B_12q23.1_mRNA Del_ATP1A1_1p21.2_mRNA Del_BCL10_1p21.2_mRNA Del_BCL11B_14q32.12_mRNA Del_BCL7A_12q24.31_mRNA Del_BRCA1_17q21.31_mRNA Del_BRD3_9q34.2_mRNA Del_CARD11_7p22.3_mRNA Del_CBFA2T3_16q24.3_mRNA Del_CDKN1B_12p13.1_mRNA Del_CDKN2A_9p21.3_mRNA Del_CSMD1_8p23.2_mRNA Del_DICER1_14q32.12_mRNA Del_ETV4_17q21.31_mRNA Del_FANCA_16q24.3_mRNA Del_FAT1_4q35.2_mRNA Del_FNBP1_9q34.2_mRNA Del_GOLGA5_14q32.12_mRNA Del_GPHN_14q24.1_mRNA Del_HRAS_11p15.5_mRNA Del_IL6ST_5q11.2_mRNA Del_IRF4_6p25.3_mRNA Del_MALAT1_11q13.1_mRNA Del_MAP2K4_17p12_mRNA Del_MAX_14q24.1_mRNA Del_MEN1_11q13.1_mRNA Del_MLLT4_6q27_mRNA Del_NOTCH1_9q34.2_mRNA Del_NRAS_1p21.2_mRNA Del_NUP214_9q34.2_mRNA Del_PAFAH1B2_11q23.3_mRNA Del_PAX7_1p36.13_mRNA Del_PCSK7_11q23.3_mRNA Del_PDE4D_5q11.2_mRNA Del_PIK3R1_5q11.2_mRNA Del_POU2AF1_11q23.3_mRNA Del_PTEN_10q23.31_mRNA Del_PTPRD_9p23_mRNA Del_RALGDS_9q34.2_mRNA Del_RB1_13q14.2_mRNA Del_RBM15_1p21.2_mRNA Del_RPL5_1p21.2_mRNA Del_SDHB_1p36.13_mRNA Del_SDHD_11q23.3_mRNA Del_STAT3_17q21.31_mRNA Del_TCF3_19p13.3_mRNA Del_TCL1A_14q32.12_mRNA Del_TCL6_14q32.12_mRNA Del_TRIM33_1p21.2_mRNA Del_TRIP11_14q32.12_mRNA Del_TSC1_9q34.2_mRNA TCGA-3C-AAAU 55 0 NA 4047 breast stage x tx nx mx female 2004 NA no infiltrating lobular carcinoma 4 white not hispanic or latino NA NA 1 1 NA NA 1 1 1 1 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.6120352 9.9809103 12.3933314 9.3573006 8.2961307 9.0482035 11.4286644 10.3906484 9.8366499 14.1289931 11.6439271 11.0437350 1.2705887 12.7963263 3.4174340 9.9565960 7.8119693 7.8895058 6.5559986 12.4116081 2.5507037 13.8075021 5.1911599 9.8088567 11.3283942 9.3328348 1.4632562 9.9288072 10.4039215 2.4632301 7.4490826 7.6505930 NA 3.8895027 10.3301334 10.2604970 10.2417287 11.7361622 9.1169817 12.0044585 2.5507037 10.6063052 14.4565110 9.4083336 10.9640579 11.4911469 11.4949421 4.9389726 8.2897893 8.9277866 11.3022478 NA 10.7518186 3.4174340 6.8512581 4.1636839 8.9550939 12.0930528 10.1545481 12.9157395 12.2393654 7.9267651 10.9814022 10.8425515 10.7001519 11.9327555 6.2114328 11.7287094 12.2938551 -0.5367961 10.3821041 9.2544037 3.8320089 3.5507037 10.4362207 9.9520853 11.1960442 9.7164975 7.3024443 8.7182695 10.6440824 11.3287808 11.1431607 9.5021599 3.656900 0.187370 -0.457580 0.258620 3.656900 0.165860 0.146970 -1.088300 0.197620 0.197620 0.221760 -0.482710 -0.467590 0.184340 2.096500 2.603700 0.186160 3.656900 -0.453400 -0.427890 0.118440 -0.567340 0.078294 0.078294 0.000000 0.000000 0.000000 1.823800 0.068952 0.215910 -0.399080 -0.465890 -0.471730 -0.379990 0.247580 0.287490 0.146970 -1.088300 -1.119000 0.226690 0.208700 0.182920 -0.457680 -0.488030 -0.488030 -0.488030 -0.467590 -0.467590 0.105410 -0.599930 -0.465250 -0.465250 0.186160 -0.469820 -0.469820 -1.080300 -0.490890 -0.490890 0.149500 0.122700 -0.567340 0.078294 0.215300 0.000000 0.000000 0.725650 0.906940 -0.596140 -0.596140 -0.468 -0.468 0.105 -0.360 0.178 0.000 -0.388 -0.491 0.149 0.000 0.000 -0.567 0.000 0.202 0.202 0.000 0.000 0.000 0.000 0.726 0.578 0.816 -0.596 -0.421 -0.421 -0.410 -0.151 -0.472 -0.472 0.248 0.248 -0.942 -1.088 0.227 0.227 0.198 0.198 -0.488 -0.488 -0.121 -0.395 -0.468 -0.468 0.105 -0.360 0.178 0.000 -0.388 -0.491 0.149 0.000 0.000 -0.567 0.000 0.202 0.202 0.000 0.000 0.000 0.000 0.726 0.578 0.816 -0.596 -0.421 -0.421 -0.410 -0.151 -0.472 -0.472 0.248 0.248 -0.942 -1.088 0.227 0.227 0.198 0.198 -0.488 -0.488 -0.121 -0.395 8.6811987 0.4632039 4.5293275 10.9968140 11.5578134 7.8864617 13.4480598 7.7195675 9.1840921 -0.5367961 10.4945974 11.8949186 10.7930372 4.5507037 5.7851686 8.3880535 3.4632432 9.3336055 11.8917319 10.4642971 9.0677941 -1.5365868 8.3181094 9.6256321 5.5717648 3.6331638 4.7851686 NA 10.2004882 6.1636799 4.6129894 8.9994882 4.6920589 11.0458580 10.1714626 2.1636919 9.4217937 2.9868114 6.1070978 11.7522511 9.6059861 7.4086847 -0.5367961 2.2705887 8.2576566 5.5293306 4.5507037 -0.5367961 1.6331522 1.5301706 1.0482362 10.2084949 2.0482013 4.9868023 11.1990084 9.3016569 4.1356662 8.8008627 10.9588461 7.0668674 2.1636919 2.7851739 12.9979693 7.3850815 NA 6.3939790 4.1636839 15.553951 7.351984 10.802813 12.796326 9.682409 10.409782 12.411608 14.194905 9.950041 10.644393 13.890128 11.118772 8.927787 7.660457 2.986811 7.662913 11.713539 11.012063 12.146674 7.857704 13.330083 9.436938 3.633164 9.215622 9.699255 9.965854 6.277021 8.602792 11.643927 7.696860 1.633152 10.425775 7.480049 8.704127 8.885306 9.518523 10.286608 9.034993 9.632540 10.716497 5.561274 11.394542 10.241729 9.850720 10.223961 9.882674 9.548713 10.081167 10.422156 9.135666 4.191160 9.099883 6.857875 11.302248 6.211433 10.751819 10.262927 10.971746 8.955094 8.128701 13.481963 10.615209 9.553353 12.940746 10.658921 2.370136 -1.536587 10.591557 9.957596 9.672694 TCGA-3C-AALI 50 0 NA 4005 breast stage iib t2 n1a m0 female 2003 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 1 1 1 1 2 2 2 2 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1831247 8.9883572 11.4134001 8.4202866 9.4519953 9.4564688 9.9821654 10.2111910 10.7251684 13.7629045 10.4944875 10.4868541 4.2085407 17.5703360 3.9284367 9.5325895 3.9284367 8.7540738 6.1654718 12.5625962 -0.8788519 12.8606482 2.9284272 10.2064447 11.3241206 9.9146819 4.4786289 9.3462859 11.3728568 0.7060221 7.2348203 5.8215189 -0.8788519 5.0037237 9.7917348 9.8023170 9.1069204 10.3158354 9.1586256 11.3396418 1.7060221 8.8370406 14.7315267 7.9065311 9.6861806 10.4231462 10.1274046 5.7357875 4.4430098 8.3305320 10.6470886 NA 10.1118916 4.5133960 6.3498978 5.0518158 9.5629851 11.1922056 9.9171181 11.1733069 12.4408917 7.1817744 9.6679730 9.1792055 10.6568399 10.6866567 3.8215163 11.4578640 8.9821654 -0.8788519 11.1551897 8.8759662 4.5158007 4.9284319 8.6947256 8.9775040 10.4435701 9.3749260 1.9284272 8.1210786 11.8355387 11.0698108 9.6890346 9.3808219 0.38733000 0.38584000 0.44376000 0.47650000 -0.43648000 0.02258500 -0.00871460 -0.49010000 0.44732000 0.44732000 0.46502000 -0.47420000 -0.46078000 0.00722170 0.00722170 0.00722170 -0.00664320 -0.00027724 -0.42630000 0.50030000 -0.01615400 -0.53053000 3.65690000 2.30880000 -0.15432000 0.09638000 0.09638000 0.78331000 -0.51775000 -0.44782000 0.00000000 -0.47649000 -0.43648000 0.05622800 0.48199000 -0.44070000 -0.49515000 -0.43518000 -0.45293000 0.44935000 0.45412000 0.44732000 -0.44372000 -0.46173000 0.00513590 0.38452000 -0.46078000 -0.46208000 -0.02395500 0.00722170 -0.02648200 -0.96265000 -0.00664320 -0.00027724 -0.00027724 -0.41223000 -0.01450300 -0.01450300 -0.46217000 0.03157700 -0.52522000 -0.53449000 -0.93873000 -0.15432000 0.09638000 0.83019000 -0.43246000 -0.07280800 -0.49057000 -0.461 -0.461 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 -0.525 0.000 -0.454 -0.927 0.000 0.000 -0.518 0.387 0.830 0.830 -0.432 -0.533 0.410 0.410 -0.476 0.000 -0.436 0.000 0.459 -0.421 0.000 -0.426 0.454 0.454 0.447 0.447 -0.444 0.000 0.353 -0.469 -0.461 -0.461 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 -0.525 0.000 -0.454 -0.927 0.000 0.000 -0.518 0.387 0.830 0.830 -0.432 -0.533 0.410 0.410 -0.476 0.000 -0.436 0.000 0.459 -0.421 0.000 -0.426 0.454 0.454 0.447 0.447 -0.444 0.000 0.353 -0.469 8.6718252 5.3305333 4.8759668 10.6674907 14.4441333 7.4708687 10.7770564 9.0431722 9.5268476 NA 12.4403273 11.9411617 9.4260001 NA 4.7935058 7.4786305 7.5176836 11.9985544 11.4359450 10.6323370 8.6544083 5.0983564 7.2085416 9.7908494 7.5598703 3.8759668 0.7060221 NA 10.9372622 5.0518158 5.9914425 8.2910035 10.7752670 11.8882905 10.3238145 3.5805073 9.6650770 -0.8788519 7.1210786 11.5031621 9.4030086 7.7935038 0.7060221 5.9412566 8.0781807 0.7060221 3.2085485 1.1210817 6.5968114 6.0552412 3.7649300 10.4316913 -0.8788519 8.8675929 10.4311232 9.6298637 5.8075790 10.2878692 12.7286400 7.9187398 5.8489984 4.5133960 8.5198222 3.5133897 0.1210154 0.1210154 -0.8788519 11.875329 7.831885 8.024960 17.570336 9.419141 10.324427 12.562596 10.040687 9.292468 9.879302 13.183799 7.465375 8.330532 8.709793 4.406482 8.536820 10.824117 11.3549977 12.9974036 5.3878657 13.6089782 7.9412578 7.0158967 8.4830225 8.6069078 10.6144487 7.7899633 8.3402471 10.4944875 7.2708260 1.1210817 10.8776348 8.4316915 9.2433630 10.0082992 11.2008966 10.5794851 6.5047824 10.9344589 8.5743491 6.8692718 12.0456183 9.1069204 10.2439066 10.9231909 10.9598885 9.7403815 9.2413163 11.0525547 7.4830225 3.3690058 8.8769509 8.1682023 10.6470886 7.8421775 10.1118916 6.8826296 11.8472967 9.5629851 7.3546981 12.6226669 10.0075372 10.1371903 12.0681675 11.2577493 3.9284367 0.7060221 9.2720951 9.2720951 10.4082137 TCGA-3C-AALJ 62 0 NA 1474 breast stage iib t2 n1a m0 female 2011 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 1 2 NA NA 1 1 2 1 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1939575 8.9618551 11.5987696 8.1485859 8.6819345 9.2117141 10.1416555 10.1984172 9.8543344 13.1024850 9.7212047 10.2401101 1.4435536 13.4344609 3.1804980 9.3403667 6.3663624 8.4472820 9.5274522 12.1737168 -0.1414619 13.3237510 NA 9.7212047 11.3378422 7.5167787 -0.1414619 11.5247912 9.6000342 2.4435271 7.1984175 6.3821294 NA 5.3821277 9.0557840 9.3918970 8.6432021 10.1804953 9.9233100 10.3373368 -0.1414619 9.4566197 14.6147586 10.4944939 10.0861832 10.0545545 9.9273455 5.7412108 6.5024229 7.7594342 9.9697029 NA 10.5301083 5.8358483 6.3504195 5.0680215 9.6529831 11.8465417 10.2336066 12.5873381 12.3554210 8.4695922 10.6651168 10.0655815 10.0032254 10.4528918 4.0284896 11.3190231 11.6550124 0.8585381 10.3977261 8.1759796 3.4435271 5.6399267 10.3322729 9.9260016 10.8308291 10.5398056 1.4435536 3.7654605 11.2621119 11.1300303 10.4668220 9.5380473 0.0833420 0.4121200 0.0000000 -0.1447700 -0.3166900 0.0126550 1.1985000 0.0375000 3.6569000 -0.7089000 1.1520000 0.0342540 0.0587950 0.0146090 -0.3206500 -0.3206500 0.0228650 0.3785800 -0.3161100 1.6240000 -0.3273900 -0.6557500 1.0898000 1.4188000 -0.3210000 0.0052749 0.0052749 3.6569000 -0.3235600 0.0833420 -0.3907300 0.0000000 -0.3264600 -0.3308700 0.0249690 0.0249690 -0.1379400 -1.0618000 0.0314360 0.2113100 -0.0027707 -0.7601700 0.0336900 0.0277780 0.3851800 0.4294000 0.0096623 0.8211800 0.0146090 -0.3206500 -0.3206500 0.0478360 0.0248290 0.3733100 0.3706800 0.0238470 -0.6981000 -0.3366400 -0.3273900 0.0084743 -0.6944100 -0.6702100 0.1713600 -0.3151700 0.0052749 0.0199230 -0.3308700 -0.6946800 -0.6923400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.689 -0.327 0.000 0.000 -0.656 -0.656 0.105 0.105 -0.321 0.000 0.098 0.421 0.000 0.000 -0.331 -0.695 0.010 -0.364 -0.136 -0.136 -0.331 -0.331 0.000 0.000 -0.346 -0.346 0.000 0.000 -0.702 -0.105 0.000 0.402 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.689 -0.327 0.000 0.000 -0.656 -0.656 0.105 0.105 -0.321 0.000 0.098 0.421 0.000 0.000 -0.331 -0.695 0.010 -0.364 -0.136 -0.136 -0.331 -0.331 0.000 0.000 -0.346 -0.346 0.000 0.000 -0.702 -0.105 0.000 0.402 0.000 0.000 7.8127633 NA 6.0873865 10.2303439 11.8666456 8.2852094 11.4861011 9.2618989 9.3660448 -0.1414619 11.6092742 11.3567532 5.6399267 2.6659157 4.4435271 7.5590069 4.1804980 11.3962709 11.3609018 10.7204296 9.2161192 3.8585679 7.7103160 10.0594659 7.4806190 7.7412101 4.8585679 NA 10.3169739 4.5024261 6.3015108 7.2336063 6.1439688 11.4903945 9.9043269 1.8585778 9.5813748 NA 7.0777354 11.4979079 10.6922479 8.7804082 -0.1414619 5.2161211 8.3302424 3.1804980 5.7893041 NA 6.1064949 5.5883908 2.4435271 11.0465378 NA 6.8010823 10.5598737 10.1404972 6.4435304 9.8697945 11.8196551 8.0873859 3.9460290 4.9460290 10.9968390 4.3821277 NA NA 2.8585580 13.214481 7.480619 8.620118 13.434461 9.950003 10.239028 12.173717 12.180495 8.678746 9.795205 12.481534 10.246584 7.759434 7.940716 3.028498 7.606760 11.540245 11.6155404 12.6466737 6.0483910 13.2487335 8.4359961 7.1346912 9.3860442 7.6464694 10.5576537 7.5520542 9.6961952 9.7212047 7.8185694 NA 9.9801007 9.2050809 9.1475486 10.1124147 10.7149928 10.7435008 7.8697943 10.7343166 8.2764199 6.4284222 10.9852200 8.6432021 9.9029613 9.9749111 10.3574164 9.6250962 10.3801676 11.1537622 7.9981188 -0.1414619 9.6847662 7.3504203 9.9697029 7.2422719 10.5301083 7.9192632 12.1546230 9.6529831 7.3982691 13.8556585 10.1183105 9.7579241 11.6533892 11.0728863 3.0284984 -0.1414619 9.8809350 8.8415609 10.3220916 TCGA-3C-AALK 52 0 NA 1448 breast stage ia t1c n0 (i+) m0 female 2011 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 2 2 2 3 3 3 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6336731 9.2937880 11.7590005 8.3832075 9.3588690 8.6867845 10.8244855 9.8790673 11.1951520 13.2535263 11.4943463 10.1153380 3.9362327 15.1366209 2.6336637 9.8515501 6.6692975 8.2365577 8.5675603 12.8439386 2.5341363 13.0969931 2.6336637 9.8219619 10.8202001 5.9841701 -1.2733431 8.9423154 9.8155708 0.7267440 8.4202693 7.4444592 -0.2731688 5.2503439 9.2226375 10.0288502 8.5195730 11.6189458 9.6567806 10.8002547 6.0931038 11.5103947 15.1972825 9.2675402 10.7044202 10.2875930 10.1034506 5.1018223 7.2105983 8.3488344 11.3180711 -0.2731688 10.8743055 6.7211361 5.3849926 4.5596754 9.9657843 11.8688896 10.2971126 12.8847610 12.6568730 7.8967078 10.7918620 10.2678792 10.9838757 10.9066916 4.0487070 12.4143769 12.3042114 NA 10.6002266 8.5533309 4.1865402 4.4547023 10.4699339 10.2828095 11.1761892 8.9239992 3.6336753 9.9711463 14.0978445 11.9350169 9.7962322 10.0848842 0.5887300 0.6171600 -0.0161540 -0.0576540 -0.0325530 0.0231450 0.0133530 0.0133530 0.0263730 0.0263730 0.0263730 0.0141900 0.0141900 0.0178610 0.0232860 0.0232860 -0.0021521 0.0000000 -0.0195890 -0.0153290 0.0252780 -0.6439600 2.9314000 1.6935000 -0.0311510 0.0083351 -0.0143660 0.0315770 -0.0232920 -0.0232920 -0.0069195 -0.0576540 -0.0246610 -0.0286280 0.0191260 0.0188030 0.0133530 0.0133530 0.0133530 0.0114000 0.0141900 0.0263730 -0.0221950 -0.0221950 -0.0221950 -0.0221950 0.0141900 0.0141900 0.0178610 0.0232860 -0.1721500 -0.1721500 -0.0021521 0.0000000 0.0000000 -0.0195890 -0.0153290 -0.0153290 0.0252780 -0.6359000 -0.6439600 -0.6405700 -0.0121070 -0.0168410 -0.0314280 0.0315770 -0.0526660 0.0195030 0.0195030 0.000 0.000 0.000 -0.172 0.000 0.000 0.000 0.000 0.000 0.000 -0.608 -0.642 -0.642 0.000 0.000 0.000 0.000 0.000 0.587 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.172 0.000 0.000 0.000 0.000 0.000 0.000 -0.608 -0.642 -0.642 0.000 0.000 0.000 0.000 0.000 0.587 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6722263 4.9362375 5.4682510 11.7975744 12.2935501 7.5152070 11.8322000 9.0971649 9.4457519 3.1191071 11.6193253 11.3746816 4.8353077 1.8966981 4.2813718 7.4749754 3.7267876 10.3424122 11.4680388 10.6325456 9.4080210 5.6216006 8.0974702 10.2070679 7.2620582 8.2620577 4.1530433 NA 10.3814186 7.1404106 7.6426619 7.6124786 6.0931038 11.2582858 10.1023650 3.7711778 8.9735232 NA 7.5816510 12.7904304 9.4263549 8.4444588 NA 2.0487244 8.0887262 NA 4.2503477 7.5081426 4.9747083 6.7687150 4.0843364 10.5052704 -1.2733431 9.1831369 10.5179454 9.6009954 4.8353077 9.6178067 11.9727808 7.6604730 2.9747128 3.3117501 11.2040349 3.2503401 NA -0.2731688 0.7267440 14.305186 5.468251 8.258164 15.136621 10.101654 10.396996 12.843939 12.010450 8.918496 10.001161 13.075856 10.457253 8.348834 9.559672 0.726744 7.660473 10.845075 11.390563 12.598880 6.384994 13.521092 8.551741 6.250344 8.984170 7.210598 10.206229 6.993569 6.771176 11.494346 8.453001 4.974708 10.168171 8.496621 7.105597 11.855260 10.411531 10.419398 7.923631 9.764329 10.629158 6.615525 11.957912 8.519573 10.415033 10.440599 10.586317 10.019104 10.245436 10.489580 8.559673 NA 9.861055 7.760921 11.318071 7.182109 10.874305 8.171797 11.016225 9.965784 7.182109 13.901474 10.147795 9.938671 12.073158 11.697787 3.311750 NA 9.583208 9.632922 9.394781 TCGA-4H-AAAK 50 0 NA 348 breast stage iiia t2 n2a m0 female 2013 NA no infiltrating lobular carcinoma 4 white not hispanic or latino NA NA 3 1 1 2 3 4 4 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.9822655 9.4388804 11.6777946 8.7446193 8.6936354 7.9792274 10.7403190 9.5462378 10.9648631 9.3228869 10.9294158 10.3546480 1.3523066 13.5789146 2.4677751 10.4630026 7.3409868 8.2390147 9.7848437 12.7312288 2.0892608 13.7801820 5.0152656 9.4406659 10.6453901 3.5746949 NA 10.0399166 9.3848066 2.9372691 8.7813597 6.9816586 NA 3.3523066 9.7917864 9.7510454 9.0469499 10.7120513 9.8421496 10.9484915 3.2267705 10.9907376 15.1329099 8.5451205 10.2982332 10.7715597 11.0985361 5.3966972 0.3523066 8.6802287 11.0841864 0.7673158 10.7645188 7.1596564 5.8226205 5.0711191 9.9062510 11.8859560 10.3718925 12.6074287 12.7028726 8.2102827 10.9837820 10.4534020 10.6373186 10.9256334 4.3820516 12.6223050 12.3700381 -1.2327690 10.3113377 8.8048861 3.6283070 5.1767297 10.5355235 10.1628734 10.7043451 9.1618020 2.7673370 9.6682060 13.4409244 12.7295123 10.0960142 9.9170863 0.0000000 0.0000000 0.0045800 -0.0027707 -0.0038779 0.0338310 -0.0193140 -0.0102320 0.0171240 0.0171240 0.9727500 0.0085429 0.0207410 0.0018030 0.0018030 0.0120970 -0.3437700 -0.0149160 0.0232860 0.0356650 0.1049700 0.2889700 0.2889700 0.2889700 1.1270000 0.2951700 0.2951700 0.0287630 0.0000000 0.0000000 0.0428740 0.0088920 0.0160060 -0.0056757 -0.6381200 0.0211830 -0.0193140 -0.0150250 -0.0102320 -0.0036011 -0.0036011 -0.6626300 0.3251100 0.3251100 0.3251100 0.3259200 0.0207410 0.0372170 0.0137720 0.0018030 -0.6520200 -0.6520200 -0.3437700 -0.0149160 -0.0149160 0.0048448 0.0356650 0.0356650 0.0072217 -0.6683600 -0.6687300 0.2889700 0.0133530 -0.7005500 0.2951700 0.0303100 -0.0135400 -0.0277600 0.0127950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.649 -0.380 0.289 0.000 0.000 1.127 1.127 0.000 0.000 0.000 0.000 0.000 0.000 -0.303 -0.303 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.663 0.000 0.325 0.325 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.649 -0.380 0.289 0.000 0.000 1.127 1.127 0.000 0.000 0.000 0.000 0.000 0.000 -0.303 -0.303 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.663 0.000 0.325 0.325 0.000 0.000 7.6315256 NA 5.3371937 11.1380266 11.4014696 8.5392085 10.8424841 8.4711045 8.5611214 -1.2327690 12.1168969 11.1418489 1.0892947 0.7673158 4.6002281 7.8388018 3.4677751 10.1325681 11.4315643 10.3103710 9.3746696 5.8226205 8.3045576 10.3848067 6.1851926 5.1936022 NA -1.2327690 10.4969600 6.6438562 7.0619598 7.9840852 7.8171877 10.7540168 9.9397668 4.1596534 9.6697144 NA 7.9792274 12.7243506 8.3123035 7.5938878 NA -0.2325994 7.3371946 4.3219281 5.3219281 -1.2327690 4.5746949 6.5583717 3.0152656 10.3219281 0.3523066 7.6862022 10.3324413 9.7453347 4.4397627 9.4192880 12.7086620 7.7069187 1.5746828 4.2591896 10.3333933 3.2908962 NA NA 1.9372691 13.1975539 5.8226205 8.2410450 13.5789146 10.3705019 10.0773839 12.7312288 11.7606315 8.9596319 10.1920304 12.9052910 12.0145250 8.6802287 9.5544256 0.7673158 7.3560540 10.6940058 11.491213 12.026052 6.721535 13.417603 8.566621 6.234944 9.162873 8.553609 10.881296 7.286975 5.275134 10.929416 8.352302 6.865371 10.228819 8.821265 7.195825 11.419288 10.571470 10.671597 8.628426 9.304558 10.332441 5.124891 11.247880 9.046950 10.432675 10.376518 11.046369 10.206651 10.075678 10.657984 8.308436 NA 9.307816 6.878892 11.084186 6.080223 10.764519 8.159656 11.071120 9.906251 6.744619 14.117830 10.132021 9.645390 12.899759 11.077668 3.015266 NA 9.881081 9.714246 9.645390 TCGA-5L-AAT0 42 0 NA 1477 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating lobular carcinoma 0 white hispanic or latino NA NA 3 1 NA NA 3 4 3 4 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.528502 9.193336 11.517575 7.998624 8.675455 9.367431 10.594574 9.491359 10.655656 12.369671 10.617919 10.357144 2.930889 13.200276 1.552377 9.920438 6.944685 8.390311 9.350678 12.616841 NA 14.011185 5.785027 9.156217 10.551240 5.380186 0.230449 12.514249 8.603305 1.230449 8.932613 6.785029 0.230449 3.317897 9.568062 9.593479 9.331102 11.808105 9.528502 10.765229 0.230449 11.561917 14.964938 8.439284 10.664025 10.379552 10.529075 5.587992 2.930889 8.449608 11.406925 -0.769551 10.640891 5.088421 6.037795 5.184637 9.895776 12.044622 10.723795 12.196224 12.545165 9.317903 10.688846 10.514824 10.743180 10.867064 4.037795 11.969165 12.175884 1.552377 10.455647 8.475992 4.088922 5.656705 10.524486 10.053807 10.129041 9.029721 3.137323 9.677523 13.147719 12.374620 9.920438 9.991991 0.5546000 0.5458800 0.0087528 -0.0018014 -0.0154660 -0.0078863 -0.0047079 -0.0047079 -0.0018014 -0.0018014 -0.0018014 0.0048579 0.0048579 0.0000000 0.0000000 0.0000000 -0.5566700 0.0011093 -0.0067813 0.0037465 0.0165650 -0.5483400 0.0195030 0.0195030 0.0308730 0.0308730 0.0408920 0.0220240 0.0061090 0.0061090 0.0013868 -0.5376400 0.0122370 -0.0154660 -0.0078863 -0.0078863 -0.0047079 -0.0047079 -0.0047079 0.0012481 -0.0030475 -0.0018014 0.0037465 0.0037465 0.0037465 0.0176840 0.0048579 0.0144700 0.0000000 0.0000000 0.0079175 0.0079175 -0.5566700 0.0011093 0.0011093 -0.0067813 0.0037465 0.0143300 0.0165650 -0.5509600 -0.5483400 0.0195030 0.0030522 0.0308730 -0.4951700 0.0220240 -0.0092666 0.0294660 0.0245480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.540 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.540 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6076503 8.6334519 5.6227576 11.1958634 10.6114420 7.8648516 12.1322495 8.5496830 9.0457911 0.8154115 11.6983001 11.3097746 2.6898806 1.2304490 3.4783635 8.1933356 4.4398957 11.0763219 11.3454835 10.6878207 9.6087346 3.6227547 8.6270446 10.7147592 7.4831055 5.4003637 1.5523771 -0.7695510 10.3808217 5.5523678 7.3699907 7.5658302 7.6525044 11.0100443 10.2782454 4.9028647 9.1773460 -0.7695510 7.5568693 13.1482780 9.9143117 8.0052271 NA 0.8154115 8.0248554 1.2304490 5.1130837 2.9308887 6.5791681 5.6087767 4.0377951 10.4319511 0.8154115 8.2105793 10.6873075 9.6619375 5.2748356 10.3552074 12.1578474 8.4995665 5.0117997 5.3179010 9.9878299 2.2304490 NA -0.7695510 1.8154115 12.960444 5.656705 8.221962 13.200276 10.282328 10.186090 12.616841 12.366309 9.049022 9.640891 12.832211 10.631319 8.449608 8.592383 0.230449 7.601127 10.700590 11.237818 12.205571 6.468844 13.171026 8.848825 7.380187 8.777334 7.627130 10.437771 8.296529 6.985327 10.617919 7.501902 4.552371 10.156736 8.665068 6.533124 10.284366 10.331102 10.355853 7.155252 9.045823 9.863435 7.082188 11.738767 9.331102 10.646710 10.343531 10.760846 9.726295 9.474804 10.346784 8.338964 -0.769551 9.827067 6.579168 11.406925 7.161177 10.640891 7.125257 10.867581 9.895776 7.070462 14.307960 10.417173 10.250725 12.412524 11.388734 3.037786 4.037795 9.535362 9.737243 9.916940 TCGA-5L-AAT1 63 0 NA 1471 breast stage iv t2 n0 m1 female 2010 NA no infiltrating lobular carcinoma 0 white hispanic or latino NA NA 3 3 1 2 4 4 4 5 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.049161 8.696387 11.079904 7.363076 8.599683 9.345110 10.137407 9.553488 10.986215 10.775657 11.017180 9.989110 6.716092 13.687056 1.704872 10.004073 7.439574 9.341489 9.791001 12.745668 1.704872 12.714518 4.792330 10.279666 10.260413 7.180598 NA 11.907852 10.134272 1.289834 8.419110 6.599682 -0.295128 4.228426 9.515436 9.476354 9.437880 8.889740 9.906989 10.143657 10.432785 10.193709 14.533100 7.512413 10.697803 10.407903 9.330574 4.459753 5.196717 8.556614 10.643709 -0.295128 10.424254 5.164296 6.446332 6.228426 9.731388 11.592466 10.841215 11.374636 12.477592 8.151948 10.496028 10.176540 10.407903 10.439574 3.704861 11.565952 12.046662 -0.295128 10.477179 8.757433 4.939443 5.587509 10.913099 9.364861 10.042487 9.066808 2.289834 10.174507 12.885396 12.648295 9.487863 9.677845 0.39894000 0.39894000 0.00013863 0.00013863 -0.00110870 0.00458000 -0.00027724 -0.00027724 0.00000000 0.00000000 0.00000000 0.00263570 0.00263570 -0.00166290 -0.00166290 -0.00166290 -0.00263220 -0.00263220 -0.00193990 0.00152550 0.00499690 0.00513590 0.00513590 0.00513590 0.00000000 0.00000000 -0.00360110 0.00485790 -0.00041585 -0.00152430 -0.00087929 0.00013863 -0.00110870 -0.00110870 -0.61958000 -0.00124730 -0.00027724 -0.00027724 0.00086819 -0.37628000 -0.00290910 0.00000000 0.00097064 0.00097064 0.00097064 0.00097064 0.00263570 0.00263570 -0.00166290 -0.00166290 0.00346870 0.00346870 -0.00263220 -0.00277070 -0.00277070 -0.00429290 -0.00567240 0.00152550 0.00499690 -0.41300000 0.00513590 0.00513590 0.00343940 0.00000000 0.00000000 0.00485790 -0.41366000 0.01153900 0.01153900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.399 0.000 0.000 -0.414 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.399 0.000 0.000 -0.414 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.849523 2.289834 5.348721 10.966960 11.407037 8.196237 11.465169 7.678591 9.632643 0.704872 12.732252 11.916875 2.874797 2.512227 2.026800 8.323250 4.914316 12.300588 11.377732 10.571371 9.650309 3.289834 8.653232 10.874790 8.017748 4.874792 1.704872 -0.295128 10.539336 6.044715 7.348721 7.924033 6.348721 10.441097 10.071187 4.562847 8.661967 1.289834 7.919184 13.014483 8.270919 8.156076 -0.295128 0.704872 8.278512 0.704872 3.704861 -0.295128 7.044714 5.894689 5.228426 10.570598 NA 7.743784 10.629677 9.700632 6.459753 10.186664 14.021429 10.456409 6.212659 6.044715 10.530619 1.289834 NA NA 1.289834 10.980978 5.026791 8.341489 13.687056 10.389613 10.947443 12.745668 10.654691 8.884774 9.857150 12.985491 10.157106 8.556614 8.911879 NA 7.274720 10.261371 11.123771 12.251036 6.131128 13.633104 8.966960 7.823806 8.724456 6.980990 10.126688 8.629677 7.721673 11.017180 7.556614 0.704872 10.680713 5.659060 7.150045 11.270443 10.730004 10.377290 7.787972 9.278512 8.151948 7.693550 11.158094 9.437880 11.017748 10.072279 10.412224 9.641503 9.525044 10.410497 7.802897 -0.295128 10.390498 5.813389 10.643709 7.605731 10.424254 7.156076 11.028483 9.731388 7.122717 14.184077 10.558174 10.750624 12.904537 10.858417 3.952790 0.704872 9.487863 9.424254 9.611755 TCGA-5T-A9QA 52 0 NA 303 breast stage iia t2 nx mx female 2013 NA yes other, specify NA black or african american not hispanic or latino NA NA 1 2 1 2 1 1 3 6 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.9291036 8.6079494 9.9429684 7.6423463 8.8674338 8.0450568 9.6252504 9.7222360 11.9663501 14.1664008 10.5279309 10.6199859 -0.9351171 13.5499291 3.1523781 10.6745579 8.0393320 7.5567704 9.9406668 12.9998983 -0.9351171 13.7191059 3.7087721 10.2655403 11.4216445 9.8528200 NA 7.7618849 10.0886718 2.3868385 8.1470665 6.1093125 NA 1.8722772 8.9926954 9.7531678 9.4453785 9.7877250 9.0550215 9.7514180 NA 10.3503197 15.3383124 7.9036174 9.9830353 11.0810293 10.5304839 3.7653544 5.0421978 7.8978073 7.2645899 NA 11.0910951 5.5243490 3.9229019 3.8722772 9.6108473 11.2673475 9.1786596 10.4922304 12.1558569 8.9025455 10.7588400 10.8372816 9.1825605 9.9360526 3.3868523 11.5225549 11.9555618 NA 9.5037093 9.0761449 5.0202755 4.1523781 11.2326492 9.5776579 10.9706806 9.0307019 1.3868661 6.5078612 11.2553595 12.0624498 9.4475416 8.4464605 1.2389000 1.4936000 0.0000000 0.0220180 0.0306730 0.0185510 0.5257200 -0.5617700 3.6569000 2.4540000 0.5634700 0.5157600 0.5323800 0.4818200 3.6569000 3.6158000 -0.0037456 -0.0037456 0.0041571 -0.0179470 -0.0533470 0.2780600 0.2780600 0.3336600 -0.1221300 -0.1221300 -0.1221300 0.4555900 -0.6465000 -0.5632600 0.4894000 0.0000000 0.0306730 0.0432920 0.0185510 0.0185510 0.5257200 -0.5617700 -0.5730900 -0.4587200 -0.4731100 -0.6024500 -0.0143720 -0.0143720 -0.0143720 -0.0551000 0.5323800 -0.6409300 0.4652100 -0.6302700 -0.5806800 -0.5806800 -0.0037456 -0.0037456 -0.0037456 0.0041571 -0.0179470 -0.0179470 -0.0400790 -0.0491600 0.2965900 0.2780600 -0.0276770 -0.1221300 -0.1221300 -0.6713200 0.0315710 0.8758200 0.9061100 -0.044 -0.560 0.465 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.309 0.309 0.000 0.000 -0.122 -0.122 -0.647 0.466 -0.449 0.006 0.000 0.906 0.000 0.000 0.000 0.000 0.000 0.000 -1.168 -1.168 0.526 -0.036 -0.459 -0.459 1.852 2.454 0.000 0.000 0.000 0.000 -0.044 -0.560 0.465 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.309 0.309 0.000 0.000 -0.122 -0.122 -0.647 0.466 -0.449 0.006 0.000 0.906 0.000 0.000 0.000 0.000 0.000 0.000 -1.168 -1.168 0.526 -0.036 -0.459 -0.459 1.852 2.454 0.000 0.000 0.000 0.000 8.68330310 NA 4.35032044 10.78430628 11.96992835 7.47532650 11.63903789 NA 9.24798209 NA 12.87839807 11.89471751 2.23483850 0.06488285 2.23483850 8.38458951 3.92290189 10.66622400 10.61518324 11.01437943 10.26887717 2.87227718 7.85281974 10.77227663 4.15237815 7.40476776 1.64989133 NA 10.24544824 4.67962647 3.06491733 8.77744437 7.18385865 11.10838227 10.52332407 0.06488285 9.18515543 NA 7.45293472 12.71742637 8.59824720 8.05075961 0.06488285 5.06491733 9.35723902 NA 1.64989133 NA -0.93511715 0.64984535 0.64984535 11.09074912 3.23483850 6.83970392 11.30182859 10.06491747 4.64987983 9.06209688 11.39359242 5.81980611 2.23483850 2.06491733 11.84914332 2.97181023 NA 0.06488285 1.38686612 14.779641 7.076144 8.452935 13.549929 10.106577 11.494586 12.999898 10.904515 10.915030 9.926004 12.206546 10.655505 7.897807 8.186451 1.386866 8.155030 11.160974 10.6395110 12.1402295 5.2146649 12.6442264 7.8164615 6.7373434 7.7514182 8.9166665 9.4954431 4.7928397 9.3234836 10.5279309 5.3686985 NA 11.2547420 7.2298244 8.6335765 10.0256434 7.2645899 11.2184695 6.7451714 10.0429128 8.6685439 NA 10.9004153 9.4453785 10.3234836 9.9221210 8.6869693 9.3514753 10.3110643 10.4008660 7.2197358 5.1093104 8.8312642 4.3128467 7.2645899 -0.9351171 11.0910951 5.1310050 10.4405000 9.6108473 7.7962363 12.9346077 9.9657843 9.7696856 12.7662239 10.6089159 NA -0.3597493 9.8063845 9.7042581 9.9875019 TCGA-A1-A0SB 70 0 NA 259 breast stage i t1c n0 m0 female 2008 NA NA other, specify 0 white not hispanic or latino NA NA 3 4 NA NA 5 5 5 7 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 1.040392e-07 33.3333333333333 8.33333333333333 0 25 33.3333333333333 11.4308034 11.0829229 12.2326320 10.1326911 8.0044211 9.0418957 10.2349260 10.5042388 10.8243759 14.5225253 9.9724307 10.8407703 3.0975265 12.7124338 3.7075800 8.3770799 7.2246423 9.5885394 12.9979205 9.0651358 0.8495990 9.2322269 8.9568199 9.3405640 10.8421871 1.6569539 -1.1504010 9.5544402 9.8524178 6.9788855 8.3534287 10.3449582 NA 1.8495990 9.9607384 9.6895939 9.9542015 11.5398191 10.3682560 12.0874103 0.4345615 9.5325973 15.3655798 8.7181630 9.7832934 11.7166884 11.8900638 5.3573972 NA 9.0639219 13.9541606 NA 11.3044161 8.2863143 3.3731610 2.7564896 10.4984098 12.6031330 10.3449582 12.0302890 13.0017292 6.7013522 11.3344257 11.4878486 11.0440518 12.7050553 5.2419202 11.5347896 11.2085287 -0.1504010 9.9344112 9.5299622 4.8054266 3.1715271 12.1136055 10.4204072 10.4766806 9.5343513 8.2049540 10.9317518 13.5870614 11.9397152 10.6379133 10.4970612 0.00208050 0.00208050 0.00000000 0.00000000 -0.00069303 -0.00857230 -0.00041585 -0.00041585 0.00208050 0.00208050 0.00208050 -0.00138580 -0.00138580 0.00083195 0.00083195 0.00083195 -0.00152430 -0.00152430 -0.00553750 -0.00013862 0.00180300 -0.00180140 -0.00180140 -0.00013862 0.00541390 0.00541390 0.00541390 -0.00207840 0.00208050 0.00208050 -0.00101900 0.00000000 -0.00069303 -0.00069303 0.00083195 0.00083195 -0.00041585 -0.00041585 -0.01161100 0.00555290 0.00305220 0.00208050 -0.00767590 -0.00767590 0.00180300 -0.00016353 -0.00138580 -0.00484610 0.00083195 0.00083195 -0.00124730 -0.00124730 -0.00152430 0.00013863 0.00013863 0.00013863 -0.00013862 -0.00013862 -0.00512270 0.00194180 -0.00180140 0.00152550 -0.00055444 0.00541390 0.00541390 -0.00207840 0.00055459 0.01628600 0.01628600 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.5569620 NA 5.2758675 10.6517152 11.7402471 6.8719705 10.6375054 10.6169472 7.9609733 0.4345615 11.7242000 9.8522420 9.0963433 -0.1504010 5.0784220 10.2653445 3.2419164 6.2758675 11.1602156 10.6305526 8.6982258 -1.1504010 7.8411246 10.6432061 3.6569539 5.6824918 NA -1.1504010 10.7877121 3.8939931 7.8524178 8.3984248 10.7818175 9.8000421 10.9859531 5.6309616 9.0975302 NA 9.3702214 14.5644386 8.3829326 5.0975307 -1.1504010 1.6569539 7.6919528 3.0195240 1.4345615 0.8495990 0.4345615 4.7803416 3.2419164 10.5504759 4.3090379 11.5498258 10.8496028 10.0443597 2.9370619 8.4916543 11.2621726 7.1715311 0.8495990 0.4345615 11.0182749 -1.1504010 5.8153859 -1.1504010 5.6950918 13.581344 5.838289 8.390699 12.712434 10.478048 10.337443 9.065136 11.898260 9.334013 11.389731 13.995694 12.920395 9.063922 7.125728 2.550039 7.973724 11.061491 11.637505 11.734727 7.329383 14.473312 9.114046 2.937062 9.874742 8.543090 10.846126 5.207155 5.019528 9.972431 5.926419 5.493458 11.290472 7.869193 7.767064 15.244836 10.556099 10.367764 8.663384 8.357398 10.331402 1.171527 10.643848 9.954202 10.089798 10.088605 12.013724 11.810329 10.655750 11.265081 9.633420 -1.150401 8.819133 9.660721 13.954161 5.078422 11.304416 10.565994 11.042512 10.498410 8.239772 15.565766 9.744421 10.341957 12.733487 11.088605 -0.150401 -1.150401 10.796509 10.706417 10.052339 TCGA-A1-A0SD 59 0 NA 437 breast stage iia t2 n0 m0 female 2005 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 NA NA NA 3 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 31.8181818181818 13.6363636363636 0 22.7272727272727 31.8181818181818 10.26600069 10.12993067 11.52096959 9.72211624 8.59396286 7.97589095 9.81617888 9.66211540 9.87733675 13.67880768 11.99589442 10.59427169 -0.01086099 13.66472714 4.01884779 10.09151406 6.59889516 8.94717023 9.26367319 12.98698596 2.21147951 13.66432281 5.27450395 9.11153190 10.85173819 7.55642328 -0.01086099 9.38713202 10.04483519 1.40414017 8.34958201 8.16402646 0.72604646 5.07656337 10.16444250 10.24255440 9.81087476 10.48128784 10.34298279 11.74579615 5.61359059 9.56085345 14.74527489 8.87596585 9.87377506 11.23207640 11.68055358 4.79645759 3.65206194 9.40835883 11.23445545 -0.01086099 10.87327138 5.80501896 5.73505637 4.28678506 10.29706058 11.66902070 10.35687954 12.06246141 12.87002354 8.24805944 10.66887417 10.25688246 11.37765634 11.02367057 5.09063752 11.49689546 12.21962171 0.72604646 10.44545525 8.69990728 3.61397948 5.00405188 10.32560734 9.55197928 10.13035652 9.88088461 5.01884779 7.82620334 12.94244855 11.67209544 9.95632707 9.46348289 1.2241000 0.1048200 -0.0018014 -0.0114730 -0.0065050 0.0000000 0.0255310 0.0255310 -0.0047079 -0.0047079 0.4166400 0.1030700 0.5245000 0.0086135 0.6068400 0.5140300 0.0000000 0.0000000 -0.5320500 0.0130740 0.5252000 -0.5152700 0.0255050 0.0255050 -0.4947500 0.0384890 0.0384890 0.5517700 -0.5208200 -0.4333300 -0.0096806 -0.0018014 -0.0065050 -0.0065050 0.0000000 0.0000000 0.0255310 0.0255310 0.0255310 0.0000000 0.0000000 0.0160060 -0.5564700 1.3893000 0.0088920 0.0088920 -0.0058140 0.0115390 0.0086135 -0.5210200 -0.5415700 -0.5426300 0.0000000 0.0000000 0.0000000 -0.5320500 0.0130740 0.0130740 0.0056919 -0.5628500 -0.5152700 0.0255050 -0.5195500 -0.4947500 0.0384890 0.5305900 0.0132130 -0.5176400 -0.5176400 0.000 0.000 0.000 -0.526 0.000 0.000 -0.532 0.000 0.000 0.000 -0.543 -0.515 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 0.552 0.552 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.526 0.000 0.000 -0.532 0.000 0.000 0.000 -0.543 -0.515 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 0.552 0.552 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.417 0.000 0.000 0.000 0.000 8.3185234 NA 5.7704617 10.7277561 10.7948447 7.0965096 11.3508619 9.5568478 8.4304680 2.9891027 12.1606947 11.8799313 2.9277069 3.4485310 4.3110308 7.8387665 3.9587313 10.9616021 11.1642345 11.3614218 10.0394030 2.9277069 7.4403119 10.0007940 7.1789257 7.0479942 2.9277069 NA 10.7556298 7.6401524 8.0316720 8.4306616 6.2050386 10.0284448 10.8206720 4.7964576 7.9355199 -1.5959689 7.9257390 11.8508340 8.1218148 8.1422306 NA 4.8959908 8.2867814 1.9891027 4.7964576 -0.5959689 5.2621212 4.8359291 2.9277069 9.8914760 1.2115107 9.7124773 10.2038247 9.9701923 5.9891004 9.4648343 13.1546883 8.3244911 3.6520619 3.1590317 12.9415994 3.1045715 NA 0.9890663 2.4915966 14.2534946 5.1183846 8.1904079 13.6647271 9.7495437 10.1269459 12.9869860 13.1980464 9.5507070 10.9647100 14.2135799 11.1104185 9.4083588 8.6160268 0.9890663 7.5100465 12.2293953 11.298956 12.087572 6.757285 14.176452 9.086255 5.805019 9.311029 8.094136 10.702401 6.364140 8.132059 11.995894 7.155682 1.726046 12.211292 6.346652 6.817935 12.035656 10.328209 11.017007 9.023441 8.995661 12.200482 6.298957 11.961001 9.810875 10.526643 9.321510 11.600894 10.097625 10.192449 10.750652 9.004051 2.863562 8.875560 8.966190 11.234455 6.464835 10.873271 7.118384 10.692047 10.297061 6.883919 13.084992 9.731691 9.960165 13.182678 9.764437 2.211480 1.211511 10.091514 10.618457 9.834068 TCGA-A1-A0SE 56 0 NA 1321 breast stage i t1c n0 (i-) m0 female 2005 NA NA mixed histology (please specify) 0 white not hispanic or latino 2 2 2 1 NA NA 3 3 6 5 NA NA 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 17.3913043478261 26.0869565217391 0 13.0434782608696 43.4782608695652 10.3759472 10.1925616 12.0953352 9.8011315 8.3434283 9.1489026 10.1597344 9.4666430 10.0658500 13.3515816 11.1793155 10.7074188 2.3965157 13.1847305 3.2545033 9.4140264 8.3019091 8.4892792 9.5187029 12.9276598 2.7184603 13.6396216 7.0511578 9.2456535 11.0757822 8.2451448 -0.6034021 8.6023151 9.9968995 3.3965157 8.3738017 7.8415367 1.3965431 4.3507165 9.9987570 10.3426973 9.8898772 11.3746962 9.5212895 11.3982821 4.7184493 10.7416500 15.0980722 8.5540838 9.9824235 11.2376932 11.4161127 5.3852067 3.3965157 9.2095014 12.0945755 NA 10.8482483 8.4653003 5.2420117 4.3034155 10.2046818 11.9391912 10.4206228 12.6831520 12.8177979 8.8903774 11.1958037 10.8607537 11.6876927 11.3745174 5.0830218 12.3161302 12.1662566 -1.6034021 10.3919359 9.4679843 3.5262191 4.4839834 10.4793364 9.9982928 10.2447537 10.1223142 3.8559498 9.8539029 12.5734743 11.6727918 10.5770528 9.7612038 0.87249000 0.87249000 0.00812580 0.01153900 -0.00995650 0.00833510 0.00249690 -0.47628000 0.30262000 0.30262000 0.30362000 0.81298000 -0.06630800 0.00344320 1.52200000 0.02651400 0.00555290 0.00555290 -0.25721000 -0.00069303 -0.00705760 -0.50038000 -0.00802440 -0.00802440 -0.01216200 -0.01216200 -0.01216200 -0.02056600 -0.06007600 -0.04698900 0.00332990 0.01153900 -0.00995650 -0.00995650 0.00833510 0.00833510 0.00249690 -0.47628000 -0.49434000 0.00000000 0.00291330 0.30262000 0.00069327 0.00069327 0.00069327 0.00069327 -0.06630800 -0.06630800 0.01544700 -0.39897000 -0.48134000 -0.48134000 0.00555290 0.00402430 -0.49193000 -0.25467000 -0.00069303 -0.00069303 -0.00705760 -0.52716000 -0.50038000 -0.00802440 -0.01326400 -0.01216200 -0.01216200 -0.00152430 -0.00235530 -0.05684600 -0.05684600 0.813 0.000 0.000 -0.481 0.000 0.000 -0.255 0.000 0.000 -0.036 -0.497 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.476 0.000 0.000 0.304 0.304 0.000 0.000 0.000 0.000 0.813 0.000 0.000 -0.481 0.000 0.000 -0.255 0.000 0.000 -0.036 -0.497 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.476 0.000 0.000 0.304 0.304 0.000 0.000 0.000 0.000 8.2913397 -1.6034021 6.2668858 10.4659718 11.4429640 6.8461247 11.4798351 8.8956004 8.2708120 3.3507235 11.3541682 10.8078688 3.6059802 4.4839834 3.9200836 8.2022659 3.3034155 9.1819744 11.0417301 11.0605248 9.4585682 4.0112362 7.7071348 9.7764418 6.9472687 3.9511122 -1.6034021 NA 10.8709884 7.7995342 6.7048609 7.6749711 8.1745992 10.2919042 10.9796048 4.1244439 8.8196379 NA 7.8143748 13.4205795 7.0865195 7.6491872 -1.6034021 -0.0185857 8.4892792 0.9814874 4.6819215 -1.6034021 4.6253406 5.0150559 3.4839834 10.6277432 0.7184383 9.5949670 10.4796689 9.4429640 3.7888423 9.7693871 11.6047564 7.9852368 2.4839834 2.9200836 11.3470779 0.3964883 -1.6034021 0.7184383 1.7184383 13.707647 5.177882 8.427189 13.184731 10.006163 10.932040 12.927660 12.768435 9.261482 10.930338 12.949551 11.069831 9.209501 9.237300 -1.603402 7.181157 11.179520 11.4617698 11.7586028 7.0475733 14.3382109 8.6738094 6.1974212 8.5764311 8.8883752 10.5593287 6.0112317 6.8143748 11.1793155 6.6205234 7.2451448 10.9892126 6.8269742 6.6538153 11.6012460 10.1269922 10.8106787 9.0547335 8.4653003 12.5303867 5.4409157 10.0283357 9.8898772 10.2431877 9.4753399 10.8958696 9.8399837 9.9894462 10.8983592 8.9880444 NA 8.8530201 6.9964351 12.0945755 6.4244283 10.8482483 7.3908757 10.4521434 10.2046818 7.4216618 14.4119153 10.1782915 9.8615781 12.8749757 10.7391524 0.7184383 -1.6034021 10.5548161 10.5373518 9.6120550 TCGA-A1-A0SF 54 0 NA 1463 breast stage iia t2 n0 m0 female 2006 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 2 2 2 3 4 4 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 2.080784e-07 27.2727272727273 57.5757575757576 0 9.09090909090909 6.06060606060606 9.531930 9.135694 11.832664 8.346898 8.674888 9.211671 10.669585 9.692175 10.763240 13.982072 10.541499 10.607558 4.268898 12.961608 2.864513 8.725410 6.765727 8.143365 9.756468 12.696371 3.024976 13.575970 4.946969 9.612374 10.583189 4.024967 -1.222970 9.344048 10.466167 3.362007 9.792457 7.173647 -1.222970 4.754321 9.277884 9.899223 9.067061 11.182450 10.037962 11.261865 10.208540 11.138164 14.932137 6.503465 11.350214 10.662739 10.714048 5.635023 4.731238 8.895984 12.320195 NA 11.157504 5.331630 5.659685 3.169364 10.123556 12.112014 10.286818 12.106559 12.459379 7.832325 10.958816 10.268430 10.940692 10.793851 3.864503 11.881641 12.167614 1.946955 10.378349 9.184310 4.173479 6.719557 10.760392 9.962537 10.214794 9.758610 3.420900 10.028525 12.439377 13.159802 9.880986 10.116336 0.6863400 1.0212000 -0.3705300 -0.0040672 0.0203430 -0.0074720 -0.0049844 -0.0049844 0.3209300 -0.7329300 0.3520200 0.3473000 0.3473000 -0.0074720 -0.0074720 -0.0074720 0.3955300 0.3941300 0.0228650 0.0573680 0.3764400 -0.3851500 -0.0175290 -0.0175290 0.3048900 0.3048900 0.3048900 0.3340900 -0.0154660 -0.3619300 -0.0027707 -0.3705300 0.0203430 0.0203430 -0.0074720 -0.0074720 -0.0049844 -0.0049844 -0.0124380 0.3513700 0.3513700 -0.0032424 -0.0020784 -0.3620400 -0.0047079 -0.0085766 0.3473000 0.3473000 -0.0074720 -0.0074720 -0.0074720 -0.0074720 0.3955300 -0.3755000 -0.3755000 0.0228650 0.0573680 0.0573680 -0.3758300 -0.3706500 -0.3851500 -0.0175290 0.0000000 0.3048900 0.3048900 0.3494100 0.0013868 -0.0186280 -0.0186280 0.347 0.347 0.000 0.000 0.047 -0.349 0.000 0.000 0.385 0.391 -0.371 -0.368 0.000 0.000 0.000 0.305 0.305 0.322 0.686 0.349 0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.351 0.351 0.000 0.347 0.000 0.000 0.000 0.000 0.347 0.347 0.000 0.000 0.047 -0.349 0.000 0.000 0.385 0.391 -0.371 -0.368 0.000 0.000 0.000 0.305 0.305 0.322 0.686 0.349 0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.351 0.351 0.000 0.347 0.000 0.000 0.000 0.000 8.8268910 6.7018554 4.3316336 11.0470457 11.4102648 8.1525379 11.5950254 8.8928794 9.0234386 4.3006070 11.8556936 11.3528039 2.6839434 5.2848361 3.0989753 8.0531667 3.8645031 10.1725766 11.5140785 10.3195907 9.2638774 5.1864332 7.8881782 10.5489445 7.6319111 5.8104662 0.7770304 NA 10.8651681 8.9101846 6.3468984 7.6319111 8.4861263 10.6228304 10.5489445 3.3006070 8.8565273 -1.2229696 6.9962113 13.1904060 7.2116703 6.9419490 NA 4.5843973 8.5763241 -1.2229696 4.8645031 NA 7.1991069 6.7829471 4.5843973 10.7507398 2.7770514 9.1345945 10.6291818 9.3383304 6.4423779 11.2251587 12.1148037 8.5730821 3.4209000 4.9469694 10.8299501 -1.2229696 0.3619929 -1.2229696 1.3619929 11.891909 6.015446 8.240567 12.961608 10.231856 10.683181 12.696371 12.457292 8.960678 10.374164 12.847750 10.795590 8.895984 8.922975 1.584385 6.991362 10.674132 11.1768544 12.2770129 6.7370445 13.1367213 8.7685645 7.4423787 8.6272293 8.0808234 10.6142564 7.2158339 6.3917523 10.5414994 7.0297080 2.4774701 10.2090623 6.8049480 7.0339119 10.3059849 10.2194677 10.7682100 8.3162014 8.2728975 10.7625286 6.0249690 10.6494595 9.0670613 10.8011432 10.1482746 10.8193858 9.0344303 9.8822962 10.7107331 9.0332512 8.5369306 9.2199342 8.3064732 12.3201951 7.8907847 11.1575035 5.9668665 10.6423891 10.1235561 6.9469671 14.2548640 10.3652886 10.5256546 12.2484636 11.4598177 0.7770304 -1.2229696 9.3834477 9.7326923 8.9852767 TCGA-A1-A0SG 61 0 NA 434 breast stage iib t2 n1a m0 female 2006 NA NA other, specify 1 white not hispanic or latino NA NA 3 1 NA NA 4 1 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 26.9230769230769 11.5384615384615 11.5384615384615 26.9230769230769 23.0769230769231 9.871489 9.580688 11.843920 9.528898 8.604234 8.890218 10.880608 9.094039 10.204243 13.508943 10.458667 10.649881 4.080675 13.380075 2.696016 10.364105 4.883635 8.005864 10.689104 12.530567 4.080675 13.653594 6.033879 10.113725 11.127390 6.065243 -1.473931 11.088326 10.494750 NA 8.670742 6.670741 -1.473931 4.655369 9.391816 9.646321 9.641777 10.270917 8.270917 11.439534 11.861334 11.359171 14.921952 7.794836 10.095464 11.787591 11.074424 4.570475 3.526081 8.685955 11.854337 NA 10.712507 6.896771 5.857001 4.675833 10.374315 11.341667 10.254854 12.370887 12.702101 7.584075 10.825005 10.344406 10.901123 10.877851 4.829865 12.030033 10.390656 NA 10.378223 9.540104 2.128953 6.526083 10.661151 9.918401 10.173991 10.757904 4.226524 8.950249 12.925428 12.073942 10.107755 9.690362 0.00750000 0.00750000 -0.00733390 -0.00733390 -0.01216200 0.00027728 -0.00553750 -0.00304750 1.23660000 1.23660000 1.22770000 0.00000000 0.00000000 -0.00926660 -0.00926660 -0.00926660 0.01167900 0.01167900 -0.00249380 0.00041593 0.00430210 0.02314500 0.02314500 0.02314500 0.00152550 0.00152550 0.00471900 0.18344000 0.00750000 0.00750000 -0.00221680 -0.00733390 -0.01216200 -0.01216200 -0.59970000 0.01070300 -0.58215000 -0.60119000 -0.01257600 0.00388540 0.00388540 -0.61355000 -0.00048984 -0.00048984 -0.00048984 -0.00048984 0.00000000 0.00000000 -0.00926660 -0.00926660 -0.00926660 -0.00926660 0.01167900 0.01167900 0.01167900 -0.00249380 0.00041593 0.00319100 0.00430210 -0.60680000 0.02314500 0.02314500 -0.00761010 0.00152550 0.00152550 0.18344000 0.01167900 -0.23178000 -0.23178000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.205 0.622 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.183 0.183 0.000 -0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 1.237 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.205 0.622 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.183 0.183 0.000 -0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 1.237 0.000 0.000 0.000 0.000 8.3933621 NA 6.6859542 11.0494002 11.6548831 7.6846680 11.1176056 9.2166137 8.7620973 4.3589729 11.2926122 11.2430355 3.7740069 -1.4739312 3.8836306 7.8298641 3.4802780 9.5813657 11.7524954 10.0129182 9.2064427 7.9997892 6.8659337 10.3660743 6.9855152 4.5704751 0.5260688 NA 10.8539165 5.5921730 6.8252908 8.0768300 11.3717693 10.7181263 10.0535602 4.5033615 8.5881292 NA 7.0613582 12.0641509 8.0633018 7.0691146 -0.4739312 6.7306549 7.5786512 5.3334380 5.3204991 NA 4.4087254 6.1807904 2.6135552 10.7211478 1.3334237 7.5004977 10.3797826 9.7330975 4.7159098 10.1798240 12.2903328 7.7644881 2.3334524 4.1407950 10.9381237 1.3334237 NA -1.4739312 1.6959938 13.5403906 4.2540044 8.7146721 13.3800750 10.1949682 10.3012819 12.5305671 11.7916983 9.0864160 10.7635920 12.6294530 8.7656819 8.6859545 8.3964481 0.5260688 6.8207036 12.2750098 11.142632 12.596456 6.125996 13.300972 8.563630 5.754901 9.788765 8.339864 10.875254 7.663074 8.962795 10.458667 6.725756 2.918405 10.546716 4.634605 6.086646 11.356202 10.581027 10.466764 9.615428 9.113861 11.329609 6.103512 10.350183 9.641777 10.468598 10.259522 12.004474 11.108225 10.387558 10.644375 9.419385 NA 9.625339 6.352631 11.854337 7.950250 10.712507 7.559506 10.355410 10.374315 6.901123 13.376270 10.288465 10.317246 12.525907 11.228472 6.205563 1.985500 10.543588 10.209955 9.347060 TCGA-A1-A0SH 39 0 NA 1437 breast stage iia t2 n0 (i-) m0 female 2006 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 1 1 3 2 3 3 5 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.184823e-06 6.242351e-07 3.65853658536585 63.4146341463415 4.8780487804878 20.7317073170732 7.31707317073171 10.0799839 10.2813875 11.2822246 9.7043576 8.6273956 8.5873181 9.1951278 9.8367422 11.0700817 13.2455163 10.5025833 10.4805073 2.7005951 14.1349731 2.8526181 10.4603089 6.9694729 8.5264476 7.8593553 12.4638179 0.8526381 12.8931038 5.4614172 9.2136224 10.5011460 3.9229970 NA 9.2380397 9.9111416 5.0384757 9.1305935 8.0364923 0.1156992 5.4848761 9.6734259 10.6088313 9.4133235 11.2466425 10.3859384 11.4612331 -0.4693299 9.9068060 15.6609092 8.4172306 10.2079597 11.2037688 11.9528767 5.5306794 2.3380250 9.7516634 11.5377078 0.5306701 11.4239821 6.0384757 6.0463797 5.0384757 10.2371766 11.3504604 10.2755144 13.0527103 12.4685141 8.7081000 11.3863277 11.0094451 11.2086203 10.7634013 4.9057215 12.3991173 11.7542298 -0.4693299 10.4989873 8.9411318 3.1751094 5.7594994 10.2624239 9.9294243 10.3536496 9.9143848 4.2586018 8.6651067 12.7998803 13.2699865 9.7285115 10.0028637 -0.00401620 0.49286000 0.00805670 0.88666000 -0.01354000 0.02342600 -0.01519100 -0.01519100 -0.01147300 -0.01147300 0.45632000 0.00172050 0.00172050 0.00752270 0.02132300 0.01071400 0.41714000 -0.00129070 -0.00733390 -0.00069303 0.00249690 0.00610900 0.46468000 0.46468000 0.02356600 0.02356600 0.01642500 0.02679500 -0.41234000 -0.00401620 -0.45800000 -0.46812000 0.02848100 -0.01271300 -0.01770900 -0.01770900 -0.01519100 -0.01519100 -0.47860000 0.04911400 0.04911400 -0.01147300 -0.01247600 -0.01247600 0.00861480 0.03101400 0.01307400 0.04131700 0.00752270 0.02132300 -0.45811000 -0.45811000 -0.00129070 -0.00129070 -0.00129070 -0.02835500 -0.00069303 0.01628600 0.00249690 -0.45790000 -0.45319000 0.46468000 0.00583090 0.02356600 0.01642500 0.02679500 -0.02246900 0.05607600 0.07369000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 -0.453 0.459 0.000 0.000 0.000 0.000 0.000 0.476 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 -0.453 0.459 0.000 0.000 0.000 0.000 0.000 0.476 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 7.8344616 NA 5.1156451 10.4091147 11.5020445 6.2129720 10.8915276 9.5622094 8.3737222 1.1156326 13.1752692 11.6225886 2.4375740 2.2311252 4.1745343 8.0986364 4.2855650 10.1333793 11.7628016 9.9977766 9.3307715 1.9901199 7.5805292 10.3149064 6.3824304 4.2031072 2.4375740 NA 10.9749189 6.1745363 8.0717771 7.9336924 5.7594994 10.5034952 10.0493337 6.2380397 8.3071134 NA 8.1654914 12.7789788 7.1380106 7.2449261 -1.4691302 0.5306701 8.1906766 0.8526381 3.8526082 -0.4693299 3.7401288 5.1329716 3.5750702 10.2237318 1.3380535 9.1128226 10.2792928 9.7786081 3.7006062 10.0852694 11.6959016 8.2293851 0.5306701 3.3380393 10.5405092 2.8526181 NA -1.4691302 1.8525982 12.376367 4.870532 8.944309 14.134973 10.104328 10.638878 12.463818 11.371655 8.889332 11.239980 12.842642 9.379303 9.751663 9.936886 NA 7.347664 10.592389 11.7860042 12.2202418 6.0384757 14.1575571 8.8367422 6.1527330 8.6509185 7.7278973 10.2113565 6.9653087 4.8344635 10.5025833 8.2500696 8.6980986 10.8134794 6.4254979 6.0282133 13.2023874 10.4614179 11.0220326 8.2872368 8.1654914 11.8429963 6.0144959 9.7365349 9.4133235 10.1955723 10.0013394 10.2967953 9.7136955 11.0107133 10.7018574 9.1736347 -1.4691302 9.6110851 7.7249694 11.5377078 5.7006062 11.4239821 10.4761243 10.4041246 10.2371766 6.8390198 13.7625017 9.2603012 9.9024571 13.2051487 10.6349517 -0.4693299 -1.4691302 10.0114708 10.4669504 9.4746605 TCGA-A1-A0SI 52 0 NA 635 breast stage iib t2 n1a m0 female 2007 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 1 NA NA 2 2 5 4 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 4 0 0 0 0 0 0 7 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 4 0 0 0 7 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 0 2 0 0 0 0 0 0 0 4 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.612404e-06 1.664627e-06 5.91397849462366 77.4193548387097 2.1505376344086 9.67741935483871 4.83870967741935 9.6932080 9.8065928 11.8912920 9.7115541 8.4139790 9.4956456 10.7819675 9.9598280 10.9740397 13.3155488 10.5532920 10.6417849 2.4832354 12.1302266 2.8202811 10.1719521 7.6865250 8.0426690 8.5515956 12.3557950 -0.1796781 12.4394267 6.3645969 9.1935552 11.0508976 5.9006495 0.2353594 9.6276316 10.3549038 3.1895083 8.4867964 8.6244076 NA 5.1422051 10.4411073 9.8249653 8.9691770 11.2066781 10.2384807 11.5865295 0.5572875 10.4472025 15.4384901 8.6580097 9.8319698 11.0041188 10.6117109 4.8791715 NA 9.4532719 13.2679626 -0.1796781 11.5025398 4.9767806 7.3307108 5.9767806 9.2858431 11.6307144 9.6393914 12.3323587 12.8660932 8.3951854 10.6332561 10.1051278 11.6582987 11.4071164 5.2797090 12.1618881 10.1210105 1.2352982 10.3310409 8.7937350 3.2353135 5.4832418 10.7418697 9.6772209 9.7855800 9.4820547 2.5572385 10.0466889 13.1314100 12.3768625 10.3523079 10.0905720 0.82451000 0.82451000 -0.00166290 0.61770000 -0.32461000 0.00416320 -0.00021657 0.00305220 -0.42855000 0.00069327 0.00069327 0.00221930 0.00221930 0.12712000 0.12712000 0.12712000 -0.46993000 -0.00221680 -0.32554000 0.00263570 -0.32762000 -0.47184000 -0.47184000 -0.01945200 -0.02903800 -0.02903800 -0.02767100 0.42217000 -0.00041585 -0.00041585 0.00000000 -0.00166290 -0.32461000 -0.32461000 0.00416320 0.00416320 -0.00563560 -0.00021657 0.00305220 0.13184000 0.13184000 -0.14361000 0.00388540 0.00388540 0.00388540 0.00388540 0.00221930 0.00221930 0.12712000 0.12712000 0.12712000 0.12712000 -0.46993000 -0.00221680 -0.00221680 -0.33517000 0.00263570 0.00263570 -0.32762000 -0.32913000 -0.47184000 -0.47184000 -0.35863000 -0.02903800 -0.02767100 0.42217000 0.43395000 -0.00346270 -0.00719580 0.000 0.000 0.127 0.127 -0.468 0.000 -0.326 0.000 -0.328 0.554 0.224 -0.452 0.000 -0.326 -0.326 0.000 0.000 0.000 0.825 0.422 0.422 0.434 0.000 0.000 0.000 0.000 0.618 -0.325 -0.325 0.000 0.000 0.000 0.000 0.132 0.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.127 0.127 -0.468 0.000 -0.326 0.000 -0.328 0.554 0.224 -0.452 0.000 -0.326 -0.326 0.000 0.000 0.000 0.825 0.422 0.422 0.434 0.000 0.000 0.000 0.000 0.618 -0.325 -0.325 0.000 0.000 0.000 0.000 0.132 0.132 0.000 0.000 0.000 0.000 0.000 0.000 7.7802786 3.1422010 5.9006495 10.8202766 11.5435110 6.9720205 11.6934644 9.2977515 9.0082143 2.1422174 11.5662310 11.7724682 1.5572385 -1.7646406 3.3227790 7.9649352 4.0932982 11.9654658 11.8107352 10.9474112 9.2611457 3.0426618 8.0839372 9.7994636 7.4544827 3.4052436 4.1422010 NA 11.3000569 7.3174633 7.5928659 8.6049116 5.4152246 9.9743605 10.7153470 3.0932897 9.5120202 NA 7.4784881 12.0834480 7.6168568 7.0964010 -0.7646406 0.5572875 7.6510560 6.5114380 3.4447731 -1.7646406 6.5299349 3.0636410 3.6947465 10.7502747 3.1895083 9.7406294 10.4285314 9.8458776 5.0808026 10.0697853 13.7783460 8.1316466 4.5751671 4.8500243 9.6547477 2.9357615 0.2353594 2.6947465 4.0166746 10.593067 7.276973 7.932281 12.130227 9.712567 11.359920 12.355795 10.778829 9.357495 10.207217 13.519488 8.710034 9.453272 9.101048 -1.764641 7.575164 11.697177 11.586529 12.603343 7.694746 14.382677 8.976781 6.661579 9.005152 8.673472 10.417693 7.504441 5.963234 10.553292 9.691669 4.661579 10.436213 4.879172 8.055078 10.963872 10.686010 10.496821 7.831504 9.716609 11.005772 6.816515 10.474650 8.969177 10.358142 10.207217 10.647355 10.237074 10.574050 10.923346 9.409616 NA 9.797127 7.521410 13.267963 6.935754 11.502540 9.094072 10.474614 9.285843 7.866491 12.876576 10.218308 10.584042 12.395973 11.186599 1.935761 -0.973979 10.283801 10.489162 9.370382 TCGA-A1-A0SJ 39 0 NA 416 breast stage iiia t3 n1a m0 female 2006 NA NA infiltrating ductal carcinoma 3 black or african american not hispanic or latino 2 1 1 2 4 3 1 4 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.387189e-07 20 28 4 32 16 9.463504 10.074150 11.923071 9.479856 8.500403 8.086337 9.619240 11.101307 9.400868 15.884343 11.513279 11.040721 1.356482 13.185177 4.072680 10.052448 5.797047 8.351635 8.705202 12.638569 NA 13.330581 2.008559 9.213086 10.583918 4.797044 1.549127 10.139238 10.216230 -1.450873 8.278739 8.233867 3.834519 4.503317 10.055922 10.449986 7.554743 12.339773 10.478007 11.089731 NA 10.177564 14.762906 7.542057 9.279589 10.731203 11.963540 4.134081 5.040971 9.606434 11.484468 -1.450873 10.948397 7.582542 5.056913 4.503317 10.851758 11.980877 9.985830 13.289268 12.826842 8.366102 11.060377 10.499463 11.070228 11.376064 4.698869 12.001231 12.528633 2.549127 10.583574 9.137833 1.356482 5.431763 10.087793 10.493099 10.428702 10.661558 4.758570 6.214455 12.105625 12.324935 9.651094 9.378049 0.414120 0.891660 -0.015741 -0.028560 0.389820 0.410270 -0.067467 0.277100 0.443420 0.443420 1.052700 0.456830 -0.505570 -0.043737 0.887060 3.656900 1.370400 3.656900 0.289290 0.052383 -0.063166 -0.540580 0.307610 0.422840 -0.440910 0.410410 0.416640 2.128200 -0.021784 -0.021784 -0.057654 -0.015741 0.404270 0.389820 0.410270 0.400770 -0.134450 0.277100 0.277100 0.422840 -0.050641 0.443420 -0.531010 -0.511770 -0.508050 -0.499550 -0.505290 0.453770 -0.043737 -0.470560 -0.528000 -0.553270 1.318700 -0.501420 -0.503600 -0.199620 0.052383 0.052383 -0.052531 0.435810 -1.292900 -0.411570 0.425190 -0.440910 0.416640 0.384360 0.440200 -0.505150 -0.504740 -0.034 -0.454 -0.501 -0.501 -0.480 -0.480 -0.147 0.000 0.000 0.436 0.436 0.450 0.450 -0.502 0.000 -0.441 0.417 0.000 0.000 0.384 0.384 0.440 -0.505 0.000 0.000 0.000 0.000 0.397 0.397 0.410 0.410 0.000 0.277 0.423 0.000 1.029 1.029 -0.512 -0.512 0.112 0.112 -0.034 -0.454 -0.501 -0.501 -0.480 -0.480 -0.147 0.000 0.000 0.436 0.436 0.450 0.450 -0.502 0.000 -0.441 0.417 0.000 0.000 0.384 0.384 0.440 -0.505 0.000 0.000 0.000 0.000 0.397 0.397 0.410 0.410 0.000 0.277 0.423 0.000 1.029 1.029 -0.512 -0.512 0.112 0.112 8.1839296 0.1340895 6.0960130 9.8699192 14.2766935 7.3214988 10.2447820 9.5538798 9.0175392 3.3039999 10.9330929 12.0861878 3.6783987 4.2215446 2.8710551 7.3661027 3.5935091 10.1916217 10.8822740 10.2723530 8.4055444 0.5491270 7.3596907 9.2582025 6.6732398 8.8298895 4.2495591 NA 10.7961561 7.2321129 8.5448860 6.7240445 8.1246580 10.7495483 9.9590400 4.3040072 8.4664909 1.3564819 8.0529446 11.8843695 6.9241581 7.8182453 NA 5.7290279 8.1017877 0.1340895 5.2905866 -1.4508730 4.8159033 3.1993111 1.3564819 9.9050203 NA 10.6478088 10.7074128 9.6497811 6.1929753 9.6252663 12.1184996 7.4560094 2.4560176 5.4317633 12.4512111 1.5491270 NA 0.8710551 5.1490317 14.611202 6.532113 9.053938 13.185177 10.073283 11.000587 12.638569 12.068263 11.117350 11.581853 13.133905 10.613525 9.606434 8.941436 2.941444 7.563139 13.765258 10.619240 12.210563 5.906672 13.382997 8.726538 5.843740 8.400868 8.240862 9.852420 5.657643 7.506221 11.513279 7.115173 3.503311 10.263364 7.185744 8.268627 11.977086 9.597605 10.739252 8.895633 9.293953 13.036770 5.604401 10.434861 7.554743 9.965388 9.546298 11.827278 9.979048 10.730892 10.261646 9.223311 -0.450873 8.406991 7.228247 11.484468 7.004446 10.948397 5.491632 9.794671 10.851758 6.975384 13.396029 10.376858 10.081962 12.391076 9.816491 2.249567 2.134089 10.530329 9.787523 8.791102 TCGA-A1-A0SK 54 1 967 NA breast stage iia t2 n0 (i-) m0 female 2007 NA NA other, specify 0 asian not hispanic or latino 3 2 4 4 1 1 5 2 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.115464e-06 1.075072e-06 21.2765957446809 12.7659574468085 4.25531914893617 31.9148936170213 29.7872340425532 10.41463693 9.64930199 12.16901852 9.64816917 7.61027706 6.94886245 10.36033003 10.71353086 10.37341429 11.46504474 12.78065428 10.93383293 -0.08085064 8.24554463 3.65608444 9.27593382 5.19213497 8.33837316 8.71677660 10.97304087 2.03460311 2.24104694 9.71623609 9.79476188 11.59360154 4.54360724 2.24104694 5.81796854 11.30065794 1.14149819 8.88201112 6.68288085 4.28835118 6.06886210 10.26193048 12.54391044 9.02240277 9.04323622 9.88970031 11.25357452 9.05610606 12.85385015 13.79860251 8.12510346 8.71893626 11.63992924 11.28598357 5.17964242 4.97800796 8.56297122 10.23690442 0.91914936 10.07139988 2.42161380 2.50408643 4.35651712 6.47370413 13.22915965 9.07055436 10.89949258 13.20413180 6.21679629 11.83511881 11.80882175 11.94252283 11.92345251 5.37854630 11.56507356 8.13989613 NA 9.65720732 11.05396911 7.60196908 6.55815434 12.59323368 11.48135743 10.42954954 10.39180584 4.33415348 8.21373561 11.30425839 9.88393707 11.10357711 9.69938141 0.29079000 -0.28644000 -0.77419000 -0.06813600 -0.30898000 0.16925000 0.18736000 0.10661000 2.91530000 2.12240000 1.65780000 -0.23693000 0.04159000 0.10564000 0.11637000 0.11637000 2.98260000 0.06941100 0.93527000 -0.33272000 0.06207000 -0.27363000 -0.27363000 -0.27866000 0.18206000 0.18206000 0.18206000 0.19237000 0.01320400 -0.05887500 -0.82122000 -0.76536000 -0.30898000 -0.93490000 -0.80402000 -0.80402000 -0.28811000 0.11784000 0.14711000 -0.29958000 0.00000000 -1.25560000 0.14161000 0.14161000 0.14161000 0.15815000 0.00054528 -0.44664000 0.10564000 0.11637000 0.17090000 0.17497000 2.98260000 0.06941100 0.65718000 -1.29290000 -0.33272000 -0.40704000 -0.77889000 -0.75720000 -0.26469000 -0.27363000 0.15452000 -0.81170000 0.18206000 -0.81516000 0.09855100 0.21145000 -0.82016000 -0.430 -0.430 0.106 0.106 0.000 0.000 0.935 -0.333 0.000 -0.738 -0.738 -0.274 -0.274 0.162 0.162 0.182 0.182 0.000 0.000 -0.256 -0.256 0.000 0.211 0.000 0.000 -0.765 -0.765 -0.309 -0.309 -0.804 -0.804 0.111 0.111 -0.285 0.000 0.125 1.658 0.142 0.142 -0.125 -0.125 -0.430 -0.430 0.106 0.106 0.000 0.000 0.935 -0.333 0.000 -0.738 -0.738 -0.274 -0.274 0.162 0.162 0.182 0.182 0.000 0.000 -0.256 -0.256 0.000 0.211 0.000 0.000 -0.765 -0.765 -0.309 -0.309 -0.804 -0.804 0.111 0.111 -0.285 0.000 0.125 1.658 0.142 0.142 -0.125 -0.125 8.21066940 -1.66566056 4.63793478 9.95116070 10.96873669 5.18939366 9.92005386 8.02357418 7.68166290 -1.66566056 11.39619862 9.35667975 8.14793347 NA 4.24103931 9.99637575 7.88874142 6.93777869 11.29451651 11.19155038 9.28105882 1.14149819 10.28178946 10.02327684 4.99236511 -0.08085064 -0.66588943 2.14149819 10.72646989 5.96350880 8.89448524 9.03545896 6.45309281 10.13371738 11.27134239 -0.66588943 10.77476211 6.10894048 8.18120991 13.48235098 6.73075678 11.58519100 -1.66566056 8.12042193 7.44267732 6.80175750 7.13828307 -1.66566056 2.58207422 1.93821050 3.03458550 12.79774071 0.91914936 8.48389960 10.37888807 9.94379301 7.48897044 10.73209448 11.62229759 7.93592348 1.65608444 6.87718473 10.57911083 9.78947969 3.85771233 6.82600563 4.44267815 8.125364 9.108116 8.210669 8.245545 11.077725 10.053969 10.973041 12.259985 10.057779 13.038705 12.341618 12.317948 8.562971 8.312863 8.803794 8.004809 8.895440 11.5468009 11.6146333 7.3056961 16.6169955 8.4826289 8.9789100 11.3687795 10.1281622 11.5921045 2.5040864 9.7498942 12.7806543 9.7551653 0.9191494 10.1571215 10.2645202 9.7708900 11.3504385 10.5242858 9.7461930 9.1725685 11.0930003 7.6560809 4.3565171 9.7451444 9.0224028 9.9529967 10.0039233 12.3410045 12.6739329 7.1122299 11.2914360 9.9345301 NA 9.5762428 6.3785463 10.2369044 6.1479335 10.0713999 8.1575197 11.9187627 6.4737041 7.7499157 14.5173032 10.3217718 10.6518477 11.7375640 10.8889811 NA 8.1967900 11.1338389 8.8897002 9.7183966 TCGA-A1-A0SM 77 0 NA 242 breast stage iia t2 n0 (i-) m0 male 2007 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 1 5 NA NA 2 2 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.733986e-07 35 10 0 25 30 10.2866190 9.9986509 11.0702904 8.8162080 9.2949805 8.6481760 9.6436284 10.1951858 10.4944061 12.5091677 11.7418351 10.2425667 NA 17.4936734 3.4238874 10.2767413 5.9802836 8.3984739 8.5434421 13.5080736 -1.6633738 13.4146619 6.1373273 10.3930383 10.5038458 3.6583600 -1.6633738 11.5557475 11.5739364 1.7958500 7.5385514 7.9511372 NA 3.4238874 8.8402533 10.8162079 10.4442986 10.1202445 9.8648818 10.8302831 1.3364548 9.5961709 15.1898347 8.1738350 10.0736750 11.2451956 10.5425263 4.5652438 2.5063480 8.8890969 10.8789759 0.6583715 11.4470741 6.1629753 5.3587971 4.1944102 10.7718375 11.4237248 9.8565552 12.4707738 12.5577882 8.7605939 11.2888049 10.5990569 11.2446326 10.0694429 4.0553345 12.1747452 12.9265468 0.3363977 10.3290120 8.8481804 1.3364548 6.3022112 10.0858782 9.9941928 10.7160767 9.5379390 1.7958500 10.3480044 12.9545264 13.6511879 9.5843552 9.9807347 2.3188000 1.0779000 -0.0028450 -0.0028450 0.0075644 0.0120190 -0.0089268 -0.0089268 0.0202670 0.0202670 0.0281250 -0.0060264 -0.0060264 0.5744200 2.4511000 3.6569000 0.0070079 0.0048226 -0.0052197 0.0033941 0.0095292 -0.0101680 3.6569000 1.0355000 -0.0162280 -0.0162280 -0.0162280 0.1003700 -0.5945400 0.4927600 -0.0137510 -0.0028450 0.0075644 0.0075644 0.0120190 0.0000000 -0.0089268 -0.0089268 0.0035330 0.0146740 0.0146740 0.0202670 0.0360120 0.0360120 -0.5563000 -0.5462800 -0.0060264 -0.0060264 0.0159310 -0.0692700 -0.5840700 -0.5792600 0.0070079 0.0048226 0.0048226 -0.0052197 0.0033941 0.0033941 0.0313600 -0.5727400 -0.0014602 -0.5837800 -0.0013217 -0.0162280 -0.0162280 0.1003700 -0.0074081 0.0164900 0.0164900 0.000 0.000 0.558 -0.549 0.000 0.000 0.000 0.000 0.000 0.000 -0.573 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.493 0.100 0.100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.546 0.000 0.000 0.000 0.000 0.558 -0.549 0.000 0.000 0.000 0.000 0.000 0.000 -0.573 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.493 0.100 0.100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.546 0.000 0.000 8.5470989 3.3808264 6.0913148 11.3979676 11.9090095 6.3025000 11.6785023 8.9889860 8.2703103 -0.6636023 12.3366918 11.8963950 3.5063480 0.9213602 4.2671687 8.2448205 4.1944102 10.0896445 11.3949268 11.6512941 8.9372696 NA 7.2582683 9.9058086 6.1308444 3.2433187 4.4861737 -0.6636023 10.9249081 6.6218292 6.7244443 7.8910163 7.2818716 10.4720697 11.3500993 4.8755884 8.9288846 -1.6633738 7.4734184 12.5655469 6.9910637 7.4527717 -1.6633738 5.4657101 8.3392425 3.2906308 3.3364262 0.3363977 3.1437852 6.2838607 1.5063480 10.6549704 3.9213887 6.7710563 10.4669982 9.9977604 5.3476550 9.3581017 11.7152644 8.4436448 2.4239008 2.8599894 10.4602258 3.5458819 NA -1.6633738 2.1437852 15.3876375 6.7373068 8.0455112 17.4936734 9.8362735 10.8599897 13.5080736 11.7267310 11.7565682 10.3429150 14.5481449 8.8121609 8.8890969 10.3560184 0.3363977 7.6171986 12.1648617 10.8119078 12.5333371 7.1502093 14.4726166 9.3889956 4.6939775 8.6264464 7.3998231 9.1283151 7.4159124 4.7114674 11.7418351 6.7710563 3.1437852 10.3190648 8.0745199 6.4153784 11.7256557 9.7141804 11.4170787 7.9138564 9.1685265 11.5099487 4.2906235 11.5115390 10.4442986 9.9293518 9.7705346 10.9400540 9.7674029 11.0504585 9.6862617 8.5113534 NA 9.1941210 7.1971420 10.8789759 4.5458819 11.4470741 9.2523071 9.9363405 10.7718375 6.8794595 14.2399801 9.4624867 9.5932260 12.0979789 11.1322644 1.1437852 0.3363977 10.3991484 10.0394661 8.6367801 TCGA-A1-A0SN 50 0 NA 1196 breast stage iia t1c n1 mx female 2007 NA NA infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 1 2 NA NA 2 2 5 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.24847e-06 3.81477e-07 21.2765957446809 29.7872340425532 2.12765957446809 27.6595744680851 19.1489361702128 9.9887357 10.6421779 11.8470935 9.8198350 7.8612160 9.1225915 10.2374300 10.1358121 9.9754684 13.4663100 11.3493057 10.8637016 4.5492009 17.2223191 3.4886564 9.0983159 6.6813073 8.5343048 9.6132266 12.9639902 1.1667154 13.2356562 2.5292962 9.3074324 10.6821522 6.1209304 1.1667154 10.0162507 10.5255421 3.6813031 8.3193808 7.5809663 -1.6407037 4.9887347 10.6473800 11.2854897 9.6273362 10.9306577 9.3614909 11.0830400 -0.6407037 10.0847453 14.7848573 9.5996219 9.0701596 11.9293533 11.0436894 3.9443431 5.6073066 9.0658752 11.7406516 -0.6407037 10.8763102 5.0736232 7.0282641 5.6447821 10.3269656 12.0412763 10.6258728 11.8496032 12.4067586 7.9120480 11.0108793 10.1459958 10.8033586 11.0864486 4.1142671 11.6230884 9.3373744 -0.6407037 9.7246080 8.9072377 2.6284237 6.3423734 10.9478595 9.5510553 9.6643008 9.4931636 2.3593806 9.3824403 12.4914771 11.8309273 9.7533057 9.3258844 0.6721500 0.6658600 0.0055529 0.0055529 -0.3738100 0.6886800 0.0018030 -0.3707600 -0.2396400 -0.2396400 0.6428600 -0.3686100 -0.2845300 0.0252500 1.0587000 0.3312400 0.3278500 0.3278500 -0.3721100 0.4163000 0.1698600 0.1622000 3.6569000 3.6569000 -0.0523960 -0.0523960 -0.0523960 3.6569000 -0.3778800 -0.3729300 -0.3276200 0.0055529 -0.3738100 -0.3662400 0.6832800 0.6832800 -0.0056757 -0.3707600 -0.3787600 0.2579300 -0.4109100 -0.2396400 -0.0114730 0.0266540 0.0266540 0.0406090 -0.2845300 -0.2845300 0.0252500 0.0252500 -0.3721100 -0.3721100 0.3278500 0.3278500 0.3278500 -0.3763900 -0.0109490 -0.0041546 0.1146200 -0.2378900 -0.4078000 -0.3887300 0.0000000 -0.0523960 -0.0523960 0.2826300 -0.3825700 -0.3919600 -0.3863600 -0.285 -0.285 -0.372 -0.372 0.328 0.328 -0.376 0.000 0.115 -0.238 -0.238 -0.392 -0.392 0.000 0.000 0.000 0.000 -0.378 0.666 0.283 0.000 -0.383 -0.392 0.000 0.000 0.000 0.000 -0.374 -0.374 0.683 0.683 0.000 -0.302 0.258 0.258 -0.240 0.403 0.000 0.000 0.000 0.000 -0.285 -0.285 -0.372 -0.372 0.328 0.328 -0.376 0.000 0.115 -0.238 -0.238 -0.392 -0.392 0.000 0.000 0.000 0.000 -0.378 0.666 0.283 0.000 -0.383 -0.392 0.000 0.000 0.000 0.000 -0.374 -0.374 0.683 0.683 0.000 -0.302 0.258 0.258 -0.240 0.403 0.000 0.000 0.000 0.000 8.4428585 7.0388586 7.0032357 9.7543776 15.3653873 5.6468136 11.6444923 9.7015149 8.1913514 2.2662768 11.1296300 11.4322905 3.7169360 NA 1.8188097 8.6722620 4.7856447 10.5797574 12.2447895 11.2845626 8.9750088 4.4254660 7.5541360 9.7447022 7.5663935 2.7516994 3.1142671 NA 10.8095593 7.6835596 6.8105896 9.1250797 6.3650031 10.0677991 10.6832783 3.1142671 8.4105879 1.1667154 8.2204659 12.3933182 6.8671737 7.1075718 -1.6407037 6.2235654 8.1292171 5.4989306 3.8188097 NA 6.4783199 5.0235792 3.5688347 11.1987797 0.3594087 7.9349180 10.6360850 10.2231782 5.5192494 10.0117760 12.6772863 8.9574315 5.3593806 4.2901147 11.9146872 1.6813143 NA NA 3.0032424 14.457576 6.974089 7.951836 17.222319 9.640150 11.420581 12.963990 12.585716 9.411098 11.189102 13.304960 10.178361 9.065875 8.702565 7.260246 10.724334 12.327326 11.3175693 12.5784719 5.8907604 13.8978706 8.4534567 7.1731604 9.1316937 8.8472190 11.0064079 7.6767914 10.3695574 11.3493057 7.1075718 3.1667315 10.9384592 7.0974717 7.7813387 11.0090843 10.4088873 10.8797522 8.9583622 9.5736981 12.0368785 5.9518372 11.0840017 9.6273362 10.4146615 10.2756318 10.6894556 10.3294850 10.2557115 10.9523032 9.3402327 6.1472823 9.3752958 9.1075971 11.7406516 4.7516940 10.8763102 8.2827067 10.4868382 10.3269656 7.5467309 13.5372657 10.0269342 10.0436894 12.0126720 10.9382234 1.9443337 -0.6407037 10.0348951 10.2886375 9.2737641 TCGA-A1-A0SO 67 0 NA 852 breast stage iib t2 n1 m0 female 2007 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 3 3 4 4 1 1 5 5 2 7 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6207130 10.1508084 11.6995236 10.1456529 9.2878439 8.2122663 7.2266607 10.1262410 9.9250957 12.0328989 11.0328989 10.9366836 0.4348817 13.2111972 2.5723561 6.4966221 7.6713394 8.3761875 14.4171092 11.6653473 NA 5.1129169 6.4393472 8.9173560 10.7884343 4.0198086 0.4348817 9.4052400 12.5216461 4.5558591 8.0122753 8.2473446 NA 4.1790094 10.5702992 11.3255667 9.5754207 9.4671678 10.3513231 8.8228636 -0.3020483 8.3971642 13.8727545 7.9415148 9.1803528 11.2767252 11.8644624 6.7639705 -1.8868329 10.1545775 11.0996492 -1.8868329 10.2749949 2.9202742 4.3797041 3.1129169 7.5328787 12.0369885 8.5795045 8.7585767 13.0782066 3.0671224 10.6825366 10.8928325 11.6547410 11.1174899 5.1682008 11.8402007 8.0122753 9.4263683 10.0425467 10.6025154 3.1178612 3.8678075 11.9976612 10.2598052 10.3931091 10.1366727 0.1129003 3.2003788 12.7208265 10.0587279 10.9564469 10.8701000 0.905120 0.391810 1.736500 0.534670 0.216370 0.112130 1.309500 0.607190 -0.527290 0.766570 -0.734330 1.267300 -0.676740 0.671780 -0.133160 2.454900 2.135000 -0.588720 1.250400 0.767340 0.072827 -0.544720 0.168500 0.744110 -0.491830 -0.491830 1.060100 0.132880 -0.538850 0.843760 -0.545420 -0.580380 -1.059200 -1.015100 -0.820970 -0.747860 1.619300 1.045800 -1.279700 -0.946930 -1.292900 -1.292900 -0.813510 -0.990250 -0.753010 -0.616910 -0.676740 0.302820 -1.102100 -0.334510 -0.593510 -1.215800 0.230090 0.265610 0.175430 -0.459610 -0.645740 -1.061400 -0.671870 -0.650520 -0.610660 0.168500 -1.070300 0.094754 -0.438860 -0.588920 0.117850 -0.474160 -0.157330 0.954 0.954 0.000 0.000 0.200 0.200 -0.405 0.000 -0.203 0.247 -0.430 -0.611 -0.442 -0.417 -0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.118 -0.382 0.115 0.115 0.000 0.000 -0.266 -0.266 -0.748 -0.748 0.751 0.000 -0.116 -0.399 -0.550 -0.550 -0.753 -0.753 1.384 0.157 0.954 0.954 0.000 0.000 0.200 0.200 -0.405 0.000 -0.203 0.247 -0.430 -0.611 -0.442 -0.417 -0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.118 -0.382 0.115 0.115 0.000 0.000 -0.266 -0.266 -0.748 -0.748 0.751 0.000 -0.116 -0.399 -0.550 -0.550 -0.753 -0.753 1.384 0.157 7.8893512 NA 4.9073330 11.0100074 12.8886829 3.4049576 9.6813495 7.0220615 8.1271344 0.6978628 11.2531091 9.9046023 6.5223100 NA 4.5052367 10.3420375 1.9202552 8.0317817 10.8402007 11.1514944 8.1129185 NA 8.1199454 11.1129183 5.4704718 5.0077382 NA 3.5391836 11.2150581 3.9202742 6.2214421 8.7267079 8.5254883 9.4212460 11.1781662 0.9202933 10.4635813 NA 9.1157332 12.4995218 7.5947180 5.6286191 NA 3.2003788 7.8577521 4.6675061 1.6978628 -0.3020483 3.3608418 2.6650516 0.4348817 10.7248653 1.1129003 6.8543847 11.3990429 10.7840171 6.0729204 8.4280678 12.7887100 6.3843814 3.3608418 1.1129003 10.7800299 -0.3020483 -0.3020483 5.7128324 8.3369198 7.013785 8.173614 9.095912 13.211197 9.992502 11.152694 11.665347 7.072920 10.557121 12.494529 12.404521 11.737257 10.154578 8.491213 5.636480 8.494461 11.316266 11.2931383 13.0556161 6.4660659 14.6511981 8.6256588 7.1380577 10.3008889 10.3951380 10.5291326 4.2421985 2.5052304 11.0328989 9.9970889 3.1573186 11.0964464 9.6221985 8.7490897 13.1203837 9.6261524 9.7459136 9.2447753 7.6403953 8.7985431 4.8678075 8.9058226 9.5754207 9.7049081 10.5708121 9.8627878 9.1924030 12.4328021 10.8127077 8.7331381 NA 9.1992471 8.2702654 11.0996492 6.0959118 10.2749949 7.3101347 10.2017065 7.5328787 8.2332338 13.3663596 9.8323071 10.0671146 12.2960885 11.8157403 1.5723561 -0.8870997 11.3132040 9.0765369 9.5475466 TCGA-A1-A0SP 40 0 NA 584 breast stage iia t2 n0 (i-) m0 female 2007 NA NA infiltrating ductal carcinoma 0 NA not hispanic or latino 3 3 4 4 NA NA 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 7.629541e-07 2.774378e-07 13.3333333333333 26.6666666666667 6.66666666666667 36.6666666666667 16.6666666666667 9.4929345 9.1246135 12.0691046 9.6525148 9.1027613 9.2876071 10.3919634 11.4936649 11.5910573 13.6827692 12.2081885 10.4980389 -0.4546246 11.6043040 3.0688599 9.9333149 8.3364606 8.0169732 9.0016520 9.7045383 -0.8224011 7.8214220 8.3299326 9.4231109 10.7048537 4.1302637 1.5452765 10.5473849 11.0808161 0.5452765 8.6194391 7.9225083 0.1302720 5.4878111 8.4892776 12.3295235 8.5424771 8.9257589 10.0021654 10.6350791 2.9376080 11.9170743 15.5320730 8.6862936 9.8570460 11.0243200 10.5143244 3.5453012 2.4522000 9.0757040 10.0950823 -1.4548224 8.6577372 4.6745793 6.5053003 6.4581868 8.5254374 12.0229295 9.9562790 11.7360483 12.5774295 6.9203374 11.2907619 10.9668366 11.3035209 11.3612813 4.1891525 11.9689389 8.8694782 0.1302720 10.0461396 10.3327922 5.5110821 6.1600065 8.5197121 9.9472437 10.8790121 9.7233399 2.0047171 7.8190933 12.5223092 11.4357520 9.9573382 9.9322379 0.2566800 0.2700100 -0.4500700 0.1447400 0.0043021 0.9160200 -0.1086700 0.6211500 -0.1214800 -0.5684300 1.1046000 -0.4507200 -0.4507200 0.0913000 0.0413010 1.5588000 3.3206000 -0.1725900 -0.4167700 -0.4412400 -0.3776300 -0.3925200 -0.3925200 -0.3925200 0.0854010 0.0886920 0.0840650 0.2632600 0.2566800 0.2566800 0.0020805 0.9542700 0.0066653 -0.0067813 -0.4462000 -0.4617400 -0.1195800 0.6211500 0.6601400 -0.0671900 0.0905750 -0.6541700 0.0950580 0.0786370 0.0786370 -0.0376270 -0.4507200 -0.5218700 -0.0024938 0.0413010 -0.4437200 -0.4507200 3.6569000 -0.1725900 -0.1597500 -0.3958600 -0.3586300 -0.3586300 -0.4350800 0.1551600 -0.3925200 -0.3925200 0.1545700 0.0897060 0.0840650 0.2569900 0.0133530 0.1265300 0.1265300 -0.451 -0.451 0.000 0.000 2.524 -0.173 -0.410 -0.359 -0.435 0.000 0.000 -0.393 -0.393 0.162 0.162 0.000 0.000 0.257 0.257 0.257 0.257 0.000 0.127 0.000 0.000 -0.442 -0.297 0.000 0.000 0.880 -0.462 -0.121 0.500 0.000 0.000 -0.121 0.301 0.000 0.000 0.000 0.000 -0.451 -0.451 0.000 0.000 2.524 -0.173 -0.410 -0.359 -0.435 0.000 0.000 -0.393 -0.393 0.162 0.162 0.000 0.000 0.257 0.257 0.257 0.257 0.000 0.127 0.000 0.000 -0.442 -0.297 0.000 0.000 0.880 -0.462 -0.121 0.500 0.000 0.000 -0.121 0.301 0.000 0.000 0.000 0.000 7.9419027 -0.4546246 4.1891525 10.3409315 11.0739960 6.5424206 10.7692993 9.3986073 8.6511802 2.4522000 11.9447091 11.8463194 5.4279413 -0.4546246 2.2457390 9.4416302 6.0530918 9.9360040 11.6469451 10.5172004 9.9429723 3.0047351 10.3935294 10.1075401 6.6797236 5.0998885 3.0047351 0.8672639 10.6144117 2.4522000 7.6274471 8.4001660 3.4521869 9.7973362 10.3845014 3.5453012 10.6337547 0.5452765 7.6380550 13.4095806 6.6327611 8.9536276 NA 2.0047171 8.1264985 4.3266596 2.7152125 2.8672244 5.1452087 1.5560615 4.1600085 12.0013954 7.2282925 10.4071600 10.3686649 10.1032399 6.4401150 9.3892187 12.1063469 8.6127321 3.3001823 3.7547486 10.8150088 2.2457390 6.4994935 5.1600085 5.9461764 14.635038 8.884034 7.975750 11.604304 9.307680 11.006521 9.704538 10.637064 9.439790 12.503941 13.188083 12.260831 9.075704 8.262974 6.160007 7.424881 10.416818 10.952300 12.109685 5.115154 14.948806 8.855910 7.355869 9.389219 9.518277 10.487028 6.867226 8.426412 12.208189 11.532029 5.839919 10.131199 7.697583 9.609225 13.676069 10.705799 9.824908 8.172832 10.288449 8.412577 7.203510 9.797845 8.542477 9.891257 10.238785 12.233876 11.837332 11.718194 10.693774 9.165518 NA 9.014227 6.145211 10.095082 7.905047 8.657737 6.812084 10.604980 8.525437 7.759617 14.937481 11.139856 10.596847 11.972741 12.708318 5.499495 1.130272 10.944576 9.240526 9.320085 TCGA-A1-A0SQ 45 0 NA 554 breast stage iib t2 n1 mx female 2007 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 1 2 2 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 42.8571428571429 33.3333333333333 0 19.047619047619 4.76190476190476 10.1503311 9.9571737 11.8447307 9.8653129 8.4701065 9.0145679 10.9679652 9.7463475 8.0523311 14.9173450 11.7346106 10.9930262 -1.3097170 12.4473604 2.8603073 7.8578056 5.8802129 8.0168166 8.2564413 13.7532344 -0.3095382 14.4094016 3.1498121 9.4153017 10.7598370 4.7127553 NA 8.9987264 8.4217064 2.4977401 8.5232773 6.9143887 -1.3097170 5.5232765 10.0827046 9.4937112 9.7340980 9.8203141 9.9699979 11.7395551 5.4046341 9.7811613 14.4539627 8.2837598 11.0794807 10.7804997 11.1579928 4.8998427 -1.3097170 9.2564413 10.7595012 NA 11.2607173 4.7347801 5.7127553 3.4452765 10.1877402 11.5539928 10.0391154 12.8509678 12.4321702 6.4046324 10.5622924 10.3572637 11.5770364 11.4813466 4.9383140 11.6135290 13.6929386 NA 9.7611790 9.0369011 2.3388522 5.7564763 9.1018982 9.0762496 10.6318017 9.7824836 2.5972690 5.3628135 11.0114697 11.3382953 9.7340980 8.9964489 0.6535100 0.6535100 0.0000000 0.0077783 0.0188030 0.0127950 0.0029133 0.0029133 0.0091705 0.0091705 0.0091705 -0.0132640 -0.0067813 -0.0108410 3.6569000 3.6569000 -0.0066432 -0.0066432 -0.7065700 -0.0074720 -0.0263040 -0.7347700 -0.0592690 -0.0592690 -0.1243400 -0.0313590 1.2761000 3.3004000 -0.0265770 -0.0265770 0.0030522 0.0000000 0.0188030 0.0188030 0.0127950 0.0127950 0.0029133 0.0029133 0.0102850 0.0098669 0.0098669 0.0091705 -0.0088526 -0.0088526 -0.0088526 -0.0088526 -0.0067813 -0.0067813 -0.0752110 -0.0108410 -0.7074700 -0.7074700 -0.0066432 -0.0066432 -0.0066432 -0.7065700 -0.0074720 -0.0074720 -0.0263040 -0.0306770 -0.7347700 -0.0592690 0.0043021 -0.1243400 -0.7444700 -0.0123000 0.0300290 -0.0671900 -0.0671900 0.000 0.000 0.000 -0.697 0.000 0.000 -0.707 0.000 0.000 0.000 0.000 -0.676 0.000 0.000 0.000 -0.124 -0.124 0.000 0.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.697 0.000 0.000 -0.707 0.000 0.000 0.000 0.000 -0.676 0.000 0.000 0.000 -0.124 -0.124 0.000 0.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5483680 NA 4.6445831 10.8839126 10.9852951 6.4319889 11.7992383 9.6354140 10.8624959 1.4977401 10.8628147 11.4636975 4.2139460 NA 2.1498121 7.3233827 3.2139538 10.0274516 11.3601581 10.5370530 9.0280091 1.0122826 7.6590540 10.3689873 6.8949584 4.8802104 1.6903724 NA 10.3977464 9.7265608 5.3628135 9.8047802 6.1902336 9.6758237 10.8961805 3.6903836 9.0578020 NA 6.0391165 12.3328902 6.7071948 8.3873548 NA 0.6903724 8.6590540 6.2217688 2.7778510 3.6903836 4.1166559 2.7304008 2.6903947 9.9630170 1.0122826 7.5821706 10.5256481 10.2668716 4.5483688 8.7712049 11.6660561 8.7976041 2.6903947 3.2139538 11.4696962 2.5972690 NA 1.6903724 4.4977401 16.370755 4.994168 8.241134 12.447360 9.535877 10.198182 13.753234 12.595022 13.023371 10.712408 12.874178 9.965348 9.256441 8.870296 1.012283 7.615200 13.110545 10.9524821 12.5637352 6.3414397 13.9215311 8.7949860 4.5232797 8.8876039 9.0585227 9.8011837 5.9095547 10.1045438 11.7346106 7.1082401 0.2753647 10.4831775 4.5730291 7.9286966 12.9799019 9.4343801 11.0877945 9.2198178 9.7551299 11.1731952 4.3628135 10.1448048 9.7340980 9.9400933 10.1108738 10.7193293 9.4635264 10.6255522 10.7517584 8.8802116 NA 9.0986956 6.8446480 10.7595012 5.6445831 11.2607173 5.6676679 10.9855650 10.1877402 7.4519389 12.8432266 10.4381606 9.7009153 13.4257317 10.0352379 0.6903724 -0.3095382 10.1897349 10.3803852 9.2149289 TCGA-A2-A04N 66 0 NA 4354 breast stage ia t1c n0 (i-) m0 female 2002 NA yes infiltrating ductal carcinoma 0 white hispanic or latino 1 2 3 NA 4 3 4 1 3 8 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 3.121176e-07 19.4444444444444 19.4444444444444 0 33.3333333333333 27.7777777777778 10.4440074 9.5920660 11.6181208 8.6685085 8.7974304 9.1460875 10.2812963 9.4692258 10.0338855 12.7566323 10.5723053 10.3139934 4.9122139 12.5585374 2.9122091 10.1093030 6.5160372 8.5861290 8.5113455 13.4439049 2.8342056 13.5802608 6.7987141 10.2778336 11.4896444 4.0905571 -1.3356992 9.6970226 9.2217517 3.6184853 8.8127645 6.8979084 0.2492633 3.6642894 9.4099624 10.0683653 9.9640685 12.3135443 9.9068669 11.2143134 4.5711792 12.3513356 14.5689462 7.6117788 9.9912792 11.3979390 10.7310500 4.6415691 4.5469315 8.8713025 11.0504200 1.2492633 10.9459284 5.5591063 5.6415691 4.6184853 10.3750945 11.7575406 10.5307943 12.5962259 12.7344929 7.9122157 11.0720870 10.5656000 11.2518312 10.6611147 4.0905571 11.8113340 11.8697759 NA 10.3446477 9.9092464 4.0915560 4.6866574 11.3070167 10.5307943 10.0251351 10.8251049 2.9862107 9.1829413 13.6090916 12.7313863 9.6221157 10.0218402 0.00000000 0.00000000 -0.00178380 -0.00178380 -0.01544900 0.03258100 -0.00593470 -0.00593470 0.91645000 0.98062000 2.23100000 0.00974530 0.00974530 -0.00510520 0.00479690 0.00479690 0.00265330 0.00265330 -0.00579650 0.00988460 0.02246200 0.09668900 0.09668900 0.09668900 0.04020300 0.04020300 0.04020300 0.01826100 0.03483600 0.00000000 -0.00192230 -0.00178380 -0.00095264 -0.00980110 -0.00524350 -0.00524350 -0.00593470 -0.00593470 -0.00593470 0.01281200 -0.00289160 -0.73695000 -0.00101210 -0.00101210 -0.00101210 0.02190100 0.00974530 0.00974530 0.00871500 0.00479690 0.01221400 0.01221400 0.00265330 0.00265330 0.00265330 -0.00579650 0.00988460 0.00988460 0.02246200 -0.70969000 0.09668900 0.09668900 0.00960600 0.04020300 0.04020300 0.01826100 0.01211500 -0.24215000 -0.24387000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.620 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.179 2.167 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.620 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.179 2.167 0.000 0.000 0.000 0.000 8.9680689 NA 5.5346531 10.6016619 11.4401041 6.8858757 10.9181356 8.6912264 8.3726305 2.3647405 11.7812818 10.9808101 2.2492633 2.9122091 4.4191748 8.5300212 3.9862198 9.8342131 11.3309559 10.2097353 9.5801675 4.9862152 7.9169537 10.3220531 6.4057559 4.5950262 1.6643008 NA 10.8783036 7.1681135 7.6614674 7.7195702 9.1591438 10.8896342 10.1262791 4.1878469 8.3647278 -0.3356992 7.7961448 12.3421178 9.3135443 7.3819642 -1.3356992 5.1561417 7.9003023 5.2642024 4.6415691 -0.3356992 4.8737394 6.0485109 3.1878469 10.2743902 0.9862289 7.4124809 10.4415434 9.6023975 4.5469315 9.4868589 11.4097524 7.9612043 2.3647405 3.7517529 10.7705238 1.9862289 -1.3356992 NA 0.9862289 12.917885 4.664289 8.962351 12.558537 10.515647 10.278538 13.443905 12.325955 9.212147 10.543488 12.668421 10.519546 8.871302 9.494011 1.471656 7.568170 11.495199 11.0102477 12.1440684 7.0523050 13.3349416 9.2586127 5.2936464 9.5292480 7.9929633 10.6195893 6.7832288 7.9098409 10.5723053 7.1799877 4.9496890 10.5265380 4.5222692 5.7732315 11.3160125 10.5093861 10.4852648 9.1749237 8.8761765 10.8009589 5.6529740 12.3103405 9.9640685 10.6458554 10.1283233 11.5123241 9.8448189 10.4204273 10.2776172 8.6977109 -1.3356992 9.0288934 7.1471367 11.0504200 6.9634961 10.9459284 8.0306103 10.5715543 10.3750945 6.8241594 14.0481948 10.2674508 10.7004617 12.7399344 10.9600570 -0.3356992 -0.3356992 10.5835239 9.8749594 9.7590256 TCGA-A2-A04P 36 1 548 NA breast stage iiic t2 n3c m0 female 2003 NA yes infiltrating ductal carcinoma 18 black or african american NA 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.809058e-06 6.935946e-07 7.76699029126214 14.5631067961165 2.9126213592233 43.6893203883495 31.0679611650485 9.3429138 8.7808153 10.4241271 6.8342549 9.7420194 8.9201736 10.3020084 10.3680446 10.7502970 11.1108867 10.1129152 10.3249414 1.3748447 11.5357029 2.3748169 10.7052918 5.9836321 9.4864805 10.0648210 7.8730737 NA 10.4718017 7.6189493 10.2841162 11.1054630 6.8342549 2.9597887 11.7385198 11.1779855 1.6378421 8.1692391 6.9416381 NA 5.0972905 8.3725669 10.4953201 8.9747358 10.0842515 9.5427429 10.7799645 0.6378421 7.5567206 14.6572744 7.1331792 9.6160912 9.7679990 9.6094009 4.0528940 0.6378421 14.7720698 12.0740484 NA 11.0588703 4.8602477 6.9108765 3.4452102 8.7892969 12.3266906 10.3457917 11.2482671 12.6035215 6.6528077 10.1659859 9.3635077 10.4973922 10.1718361 2.9597887 11.3070378 9.3860502 NA 10.5666225 8.8144463 5.0365737 4.3008193 8.8968161 9.3149899 11.0190399 9.2720636 2.7533264 7.5123265 13.1875619 13.0467179 9.4548411 10.6836171 0.123140 0.310010 -0.476070 3.656900 0.571300 0.674050 0.602680 -0.330870 -0.315760 -0.315760 0.653140 0.424690 -0.086139 0.968220 0.611000 -0.477180 -0.354640 -0.487310 -0.494920 -0.484700 0.112130 -0.492870 -0.492870 -0.492870 1.399000 0.526600 0.526600 -0.471310 -0.363520 0.013906 0.015028 -0.461630 0.012934 -0.933270 -0.496420 -0.476170 0.604130 -0.062092 0.121520 0.309210 -0.006505 -0.938280 0.771950 -0.465360 0.626060 -0.506500 -0.086139 -0.946860 -0.509390 -0.094856 -0.438440 -0.223180 -0.357150 0.283580 -0.508920 0.193300 -0.613260 0.244820 -0.537440 0.823330 -0.514940 -0.492870 -0.630350 -0.569220 0.526600 0.286280 1.306900 -0.104080 -0.130810 -0.123 -0.230 -0.438 -0.438 0.284 0.284 -0.478 -0.485 -0.537 0.285 0.285 -0.493 -0.493 -0.315 -0.455 -0.163 0.364 0.000 0.000 0.282 0.282 0.360 -0.111 0.000 0.000 0.291 0.291 -0.459 -0.459 -0.496 -0.496 0.000 0.000 0.000 0.000 -0.920 0.000 -0.465 -0.465 0.000 0.000 -0.123 -0.230 -0.438 -0.438 0.284 0.284 -0.478 -0.485 -0.537 0.285 0.285 -0.493 -0.493 -0.315 -0.455 -0.163 0.364 0.000 0.000 0.282 0.282 0.360 -0.111 0.000 0.000 0.291 0.291 -0.459 -0.459 -0.496 -0.496 0.000 0.000 0.000 0.000 -0.920 0.000 -0.465 -0.465 0.000 0.000 8.8424286 0.0528332 6.6895200 11.3784815 12.0406919 7.6126164 11.0602727 7.9514963 9.7426483 NA 13.8045959 11.3408959 5.2026410 NA 3.7533371 8.4126444 3.8602477 10.7292928 11.8626631 10.5467504 10.1034238 3.5764617 9.4268476 10.5351988 7.6786037 8.7481234 -0.9470277 -0.9470277 10.2439542 4.8342561 9.5316645 9.7679990 9.5030752 10.1045525 9.9340090 3.9108765 9.7093198 -0.9470277 8.5225368 12.4359242 9.2278207 9.5725312 -0.9470277 3.3008266 8.2936864 4.9355399 4.3748239 0.0528332 6.5920533 6.0419197 3.6967506 10.5774367 2.5123280 8.5041059 11.0212017 9.3894016 6.1924467 10.3446412 12.4147017 7.6858904 4.5123280 5.3382960 9.2912996 3.0529027 5.0752631 -0.9470277 7.6858904 8.4836401 8.6151374 9.3348250 11.5357029 10.1088552 11.4718017 7.8730737 8.4452123 8.1914230 9.7332545 13.4550410 9.7358895 14.7720698 7.8473111 -0.9470277 6.7739937 9.7173423 10.826858 13.108093 5.607484 13.978214 9.205154 7.622750 8.333666 4.725321 8.915455 7.516419 6.108177 10.112915 10.942399 3.445210 10.870678 4.097291 10.134957 10.377075 10.334825 10.681341 7.667605 10.036601 6.410446 7.725321 12.718672 8.974736 10.426848 10.478635 10.349238 9.109533 9.932478 9.889734 6.487523 NA 9.564173 8.465147 12.074048 8.814446 11.058870 5.462285 10.386050 8.789297 8.083562 14.649754 10.225947 10.226572 12.142842 10.921332 7.182178 1.637842 10.036601 9.920946 9.279307 TCGA-A2-A04Q 48 0 NA 2385 breast stage ia t1 n0 (i-) m0 female 2004 NA no infiltrating ductal carcinoma 0 white NA 2 3 3 NA 5 3 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 1.733986e-07 44.4444444444444 11.1111111111111 0 33.3333333333333 11.1111111111111 9.6874240 8.7713099 11.5726495 8.0069207 9.0273238 9.5095484 8.2638138 10.2719365 11.3871368 13.3025469 10.7011911 10.6288957 2.3258181 11.7016924 1.2103265 10.9199985 5.3118773 9.1132179 10.0495441 8.4880152 0.6253640 10.1102007 6.3188645 9.7896562 11.1167299 5.8445463 0.2103889 11.2728070 9.8968408 1.6253640 8.4708679 7.2028066 NA 7.5997924 9.6765867 9.9096236 9.3344617 10.1187330 9.1081857 10.4026331 8.1528547 7.2103402 14.7360854 7.5175867 9.2871560 10.6491321 9.6588008 4.0516418 NA 8.5080209 13.1548693 -1.3744489 9.8613920 6.1091934 8.3617798 4.6914672 9.9096236 11.8130392 9.9834795 12.2145608 12.5465679 6.7234098 10.6140625 9.9131132 11.0804481 10.6588008 3.4327323 11.7535333 9.3473315 1.4327457 10.7684421 10.2506300 3.4838545 5.9741071 9.7207749 9.5730147 10.2982451 10.3297137 3.1489341 8.6211449 13.1717900 13.3383346 9.6880985 9.9263022 0.4556400 0.3234700 -0.0431780 0.0122700 0.0329860 0.0207630 0.0249690 -0.0689310 -0.1365200 -0.1365200 0.6178800 0.1277100 0.1277100 -0.0365380 -0.0365380 -0.0365380 -0.0040162 -0.0040162 -0.1803000 -0.0666540 -0.1161300 0.0301690 0.0301690 0.0301690 0.1004500 0.1004500 0.1004500 0.0284810 -0.0402090 -0.0414470 0.0000000 0.0122700 -0.0702690 0.0329860 0.0207630 -0.1401300 0.0249690 -0.0689310 -0.0402090 0.0293250 -0.0016629 -0.1365200 0.7373900 -0.2196000 -0.0563070 -0.0563070 0.1277100 0.2502700 -0.0976300 -0.0365380 -0.0365380 -0.0365380 -0.0040162 -0.0040162 -0.0040162 -0.1803000 -0.0779140 -0.0779140 -0.1161300 -0.0231550 0.0301690 0.0301690 -0.1136900 0.1004500 0.1004500 0.0241270 -0.0034627 -0.1071000 -0.1071000 0.128 0.128 0.000 0.000 0.000 0.000 -0.180 0.000 -0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.100 0.100 0.000 0.323 0.000 0.000 0.000 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.140 0.000 0.000 0.000 0.000 -0.137 0.481 0.000 0.000 0.000 0.000 0.128 0.128 0.000 0.000 0.000 0.000 -0.180 0.000 -0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.100 0.100 0.000 0.323 0.000 0.000 0.000 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.140 0.000 0.000 0.000 0.000 -0.137 0.481 0.000 0.000 0.000 0.000 8.7088570 NA 5.8348300 10.3617798 11.8851210 6.4707418 10.7187954 9.1623050 9.4035945 -1.3744489 12.6864114 11.7759565 2.4327457 NA 4.3802654 8.6887727 5.2835885 12.3715772 11.5601744 10.6951632 10.7905989 8.4132805 8.4582680 10.1167299 8.9906066 3.5322671 0.2103889 3.5322671 10.5598058 3.0176903 7.9562948 8.1391052 6.4197934 9.6676390 10.7514369 4.9291566 9.5904405 -1.3744489 7.8804064 12.4385577 8.1876203 7.8827659 -1.3744489 0.6253640 8.7008569 5.4327323 4.5080229 1.6253640 8.5186795 2.5341861 6.1172317 10.8173623 2.0848126 9.0025883 10.9231539 9.9245858 7.6697716 10.9419422 14.2757284 9.6697720 7.6281925 5.8250504 10.0532144 0.2103889 0.6253640 -1.3744489 5.7021921 11.918816 8.456685 9.298687 11.701692 9.826889 10.698180 8.488015 9.105158 9.331010 10.955174 13.880628 11.242616 8.508021 8.172272 1.210327 7.780196 10.949840 11.1306931 11.4147076 4.8348325 13.4536125 8.6874240 8.8090131 9.1990249 8.4083760 9.9787066 9.0315827 7.5382673 10.7011911 8.4630056 1.7953098 9.9222941 6.9873220 8.2519084 12.7862734 11.6826927 10.3088111 7.9156733 9.1942838 8.7417218 9.8421237 11.7868672 9.3344617 10.6965049 10.1985516 10.9354225 9.3651584 9.4794670 10.5601744 7.8945043 -1.3744489 9.5440995 8.1450140 13.1548693 11.0299872 9.8613920 6.8250504 11.2259876 9.9096236 7.5969210 14.0386421 10.3404818 10.5553759 12.9837543 10.8077721 6.6083716 0.5664742 9.7996794 9.6407928 9.1818837 TCGA-A2-A04R 36 0 NA 3709 breast stage ia t1 n0 (i-) m0 female 2004 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 1 1 1 1 NA NA 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.011424e-06 5.201959e-07 13.1578947368421 18.4210526315789 7.89473684210526 35.5263157894737 25 10.0565402 9.8404316 11.5635365 8.9197235 9.4627178 8.3960267 9.9716513 9.8602452 9.7296965 14.1937370 9.3702007 10.6818266 0.1199537 12.8039203 3.0585070 7.7993827 7.1161401 8.8836679 9.9742512 13.1805419 0.1199537 14.1285351 3.4418287 9.4183468 11.1638409 8.4160535 0.8568662 6.5007240 9.6667967 1.3422703 8.7649601 6.5847882 NA 3.6224033 9.6551776 10.3812137 10.5915775 10.9585809 9.0337889 11.3575106 NA 11.6605147 14.0266363 7.2034351 9.4083839 11.3485205 11.1236544 4.2073619 0.5349580 8.9121501 12.3546199 -1.4651415 11.0876088 4.7443926 3.3929219 4.1199039 9.8574313 11.8795131 9.8540474 11.9955236 12.7711035 8.0347858 11.4416425 11.0424867 11.8432788 10.5214929 4.8924930 11.4369379 11.3862984 NA 10.3248809 8.9001685 3.1793677 3.4418287 9.8613692 10.1156694 11.0602158 9.7036119 5.9272565 10.1542427 12.3526230 10.9887248 10.0672957 9.0076306 0.8020800 0.0485460 0.0119580 0.0149020 -0.8793800 -0.0050301 0.0026357 -0.8824000 0.0055529 0.0055529 0.8354900 0.0242680 0.0242680 0.0045800 0.0045800 0.0230050 -0.0022168 1.5905000 -0.0252830 0.0093845 0.0137720 -0.0023553 -0.0023553 1.5615000 -0.0221950 -0.0221950 -0.0221950 0.7769500 -0.8516300 -0.8586600 -0.0049844 0.0119580 0.0102850 0.0227250 0.0000000 0.0000000 0.0026357 -0.8824000 -0.8923000 -0.0153290 -0.0023553 0.0055529 -0.0101600 -0.0101600 -0.0078863 -0.8714300 0.0242680 0.0197830 -0.0089906 0.0045800 -0.8750600 -0.8750600 -0.0022168 -0.0230020 -0.0155930 -0.8654700 0.0093845 0.0057346 0.0144700 -0.8647300 -0.8637300 -0.0042929 -0.0033243 -0.0221950 -0.0221950 -0.0073339 0.0030522 0.0140510 -0.8711100 0.000 0.000 0.000 -0.862 0.000 0.000 0.000 0.000 0.000 0.000 -0.864 -0.861 0.316 0.000 0.000 0.000 0.000 -0.859 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.870 -0.870 0.000 0.000 0.818 0.818 0.000 0.000 -0.131 -0.131 0.000 0.000 0.000 -0.862 0.000 0.000 0.000 0.000 0.000 0.000 -0.864 -0.861 0.316 0.000 0.000 0.000 0.000 -0.859 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.870 -0.870 0.000 0.000 0.818 0.818 0.000 0.000 -0.131 -0.131 8.8847737 NA 7.4862244 10.7622549 12.2505801 7.2134698 10.5545304 8.5136933 8.8667637 1.1198873 10.3281366 11.2126087 4.4418287 3.2353748 4.6642211 7.7468280 1.9943625 8.4129906 11.5602524 10.7884918 9.3709901 2.7048720 7.9943715 9.4781872 5.6224033 5.2214402 2.8568662 NA 10.3499226 6.9612043 6.1931508 7.9379517 4.6642211 10.2584002 10.7911485 -0.4651415 8.9643464 NA 6.3228421 11.5661240 8.9110651 7.2073648 NA 4.2898271 8.3422947 -1.4651415 5.1047937 NA 0.1199537 4.0267912 0.5349580 10.6703284 -1.4651415 6.7589414 10.3737498 10.0267929 2.7048720 8.7185750 11.8854646 6.0025450 0.1199537 2.7828698 14.0744621 4.2628616 NA -1.4651415 0.1199537 13.715544 5.622403 7.671931 12.803920 9.942234 10.207807 13.180542 12.419301 9.142270 10.905900 12.974900 11.793506 8.912150 8.872562 1.119887 8.079904 11.644934 10.494942 11.677047 7.042734 12.338968 8.032792 2.782870 9.566985 9.407615 9.351619 3.782870 4.119904 9.370201 4.534939 1.534958 10.082798 5.734612 6.824590 10.092403 9.350323 10.633301 9.973212 9.622403 12.561031 3.289834 12.234674 10.591578 10.661322 9.984088 10.311784 9.231907 10.048174 9.792917 8.487681 -1.465142 8.209255 6.517934 12.354620 4.316298 11.087609 6.834147 9.432029 9.857431 6.448427 12.818462 9.619084 9.206481 11.748348 10.671290 -1.465142 0.534958 10.103846 9.670008 8.481846 TCGA-A2-A04T 62 0 NA 2246 breast stage iia t2 n0 (i-) m0 female 2004 NA yes infiltrating ductal carcinoma 0 white NA 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.080784e-06 5.548757e-07 5.19480519480519 19.4805194805195 6.49350649350649 38.961038961039 29.8701298701299 9.43388939 9.17823434 11.72280232 9.02006015 8.32155159 7.47606165 9.73168051 11.33034574 11.06898587 14.39599579 11.32527133 10.92778803 0.47601870 12.28311472 3.47605760 8.95280792 6.37087917 8.68307602 10.96766433 3.56352425 0.79800903 8.85544005 8.10359573 9.42515882 11.22404486 6.73815713 1.47607056 10.06486534 11.65285823 1.93549746 9.55887603 6.75218660 0.06101577 5.25742179 9.22089557 10.39566994 8.88757279 10.45262591 9.86891575 11.54231914 0.79800903 8.35411271 15.14087009 7.28251487 9.82312932 10.83773144 10.40901462 3.38295770 1.47607056 9.62008252 9.61048802 -0.52387758 9.98137705 4.33404619 7.01522101 6.52591070 8.11630653 12.21563140 11.03496069 9.77812938 12.47244695 6.49842960 11.49252184 11.33091453 12.12486868 11.65767993 4.58458374 13.10274041 8.69280762 -1.52408503 10.39156765 9.67143403 3.64718785 5.24424775 12.02957104 11.10814818 10.85598152 8.96088466 7.24093345 8.90337455 11.63829571 11.32096359 10.44292764 10.32155182 1.4673000 1.6128000 1.4002000 1.0740000 0.9913600 0.1955800 0.5475300 -0.3366400 0.4174700 0.4233500 1.9076000 0.4101100 -0.2835800 -0.3940800 0.2900800 0.2900800 1.8448000 0.2937400 2.0410000 -0.3847000 0.2739500 -0.4104700 -0.3814900 -0.3669100 -0.3488200 0.5248500 0.1532300 0.4307500 0.0866660 0.4287300 -0.9424700 -0.4072500 -0.4525400 -0.0186280 -0.4195300 -0.4195300 1.3508000 1.6033000 -0.3544600 -0.4738500 0.4064400 -0.4516800 1.3503000 -0.4449600 -0.1948700 0.1716600 -0.2835800 -0.9529000 -0.2801300 0.2706600 -0.4274300 -0.5048400 0.7920000 -0.3091200 -0.3368700 -0.2448400 -0.3847000 -0.4226400 0.0190830 0.3996100 -0.4104700 -0.3814900 0.3432300 -0.3588600 0.1532300 -0.4139900 -0.4405600 -0.0049844 0.0696690 -0.419 -0.419 -0.427 -0.427 0.243 -0.309 0.549 -0.385 -0.375 -0.366 -0.052 -0.389 -0.389 0.352 0.352 -0.349 0.000 0.429 0.429 -0.448 0.000 -0.418 0.000 0.000 0.000 -0.077 -0.077 0.000 0.000 -0.303 -0.420 0.180 -0.334 -0.423 0.000 -0.061 0.390 0.623 0.623 -0.474 0.411 -0.419 -0.419 -0.427 -0.427 0.243 -0.309 0.549 -0.385 -0.375 -0.366 -0.052 -0.389 -0.389 0.352 0.352 -0.349 0.000 0.429 0.429 -0.448 0.000 -0.418 0.000 0.000 0.000 -0.077 -0.077 0.000 0.000 -0.303 -0.420 0.180 -0.334 -0.423 0.000 -0.061 0.390 0.623 0.623 -0.474 0.411 8.3073689 -1.5240850 6.9878143 10.3394737 11.7107295 5.8679508 11.1300264 9.3046981 7.8813948 NA 10.9895426 10.8565580 3.1199205 NA 3.0610158 10.0263276 2.6459783 10.2990309 11.7591501 11.5836058 9.1651861 1.7980090 9.6769604 9.7054814 6.8939143 3.0610158 -1.5240850 -0.5238776 11.0023165 5.5950023 5.7144653 9.0833921 8.6830760 10.4753289 11.5211388 3.4302585 9.7603075 -1.5240850 8.8822667 13.1656776 7.7072832 7.2737229 0.4760187 3.9679156 7.8047364 0.4760187 4.6258082 0.4760187 6.8597658 2.2864968 7.9086034 12.6254913 4.4984296 9.2508489 10.8798727 9.6541041 5.4760608 9.4367877 12.1758511 8.5635246 6.3587039 4.5635243 11.2578313 1.0610158 7.8705244 2.8683707 6.3648053 9.459055 9.671434 9.548194 12.283115 11.273521 12.225722 3.563524 9.001582 9.434904 12.136838 12.973602 11.464924 9.620083 9.251672 3.761466 7.376928 11.083392 10.853543 12.113366 4.030654 14.607938 9.021026 7.581970 9.687950 4.815914 10.811466 7.011337 5.991762 11.325271 9.253317 3.283418 9.990283 9.786674 9.687244 13.864113 12.139731 9.835262 8.372394 9.288239 8.676960 7.137840 10.818325 8.887573 10.217107 9.850014 11.728432 11.642696 11.350275 11.151798 8.828105 -1.524085 9.283634 8.572777 9.610488 7.544840 9.981377 9.765504 10.690077 8.116307 7.766219 15.059336 10.766369 10.430985 12.036872 11.165841 3.723984 -2.284897 11.008174 8.981873 9.512922 TCGA-A2-A04U 47 0 NA 2654 breast stage iia t2 n0 (i+) m0 female 2004 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.28315e-06 2.774378e-07 19.5652173913043 10.8695652173913 6.52173913043478 21.7391304347826 41.304347826087 9.5651040 7.8464921 10.3038496 6.9561961 8.6515185 9.5601479 8.9440722 11.2202359 11.9168036 11.2556146 11.0496824 10.3828815 1.6402970 11.0200308 2.3772626 9.2961203 6.6700387 8.6865061 15.8888738 5.7832497 0.0553345 5.0553302 9.1494067 9.3602506 9.9448328 6.7695747 3.1427892 10.0247154 10.7202206 NA 9.2327485 8.2550012 NA 3.9133107 7.4604706 9.7798428 9.5581607 7.7592324 8.3244556 9.4710708 NA 11.1401373 13.8782980 6.6926783 9.0383226 9.7678559 10.2574528 4.6099204 1.0553345 7.0721369 10.1160248 NA 11.1058578 3.1427892 5.2841476 4.2252518 7.2937337 12.3858257 10.6017411 11.5047355 12.2453079 6.7135405 11.3349395 7.9262177 10.3430413 11.3159545 2.1697006 10.8646951 8.6002935 0.6402507 10.6237602 11.6584916 5.9978434 2.8626894 7.9831070 8.7626880 10.7475085 8.2889486 2.2252441 7.1267912 11.1038158 11.2568402 9.2841476 9.7259851 0.8051900 2.2850000 0.4847500 -0.0659840 -0.0639720 -0.0070576 -0.0036011 -0.7696200 -0.0373540 -0.7317000 2.0457000 1.0772000 -0.1160000 2.2522000 0.4816500 0.6057500 -0.0859880 0.4515600 -0.7740500 -0.7131000 0.7952900 -0.1260300 -0.1806800 0.1480100 1.4697000 1.3003000 0.2172900 -0.0659840 -0.0997360 -0.0793430 -0.1855900 -0.7513200 -0.7483800 0.6388300 -0.7128300 -0.7036100 -0.0705360 -0.7150600 -0.7176400 -0.8517000 -0.1329000 -0.7472500 0.1659500 2.9692000 -0.0550950 -0.1187400 0.5297600 0.4356400 -0.8290300 0.4527500 -0.0268510 -0.7232300 1.5920000 -0.2504300 -0.2633600 -0.0678600 -0.7551300 -0.7885000 -0.7457500 -0.8167100 0.2584000 1.1095000 -0.7632100 -0.8935000 -0.2110700 0.4621200 0.1495000 -0.1007900 -0.0257560 0.596 0.596 0.677 0.000 0.420 0.420 -0.695 -0.713 -0.738 -0.754 -0.754 -0.181 -0.181 0.298 0.298 -0.156 -0.156 0.530 0.530 0.000 0.000 0.107 0.520 0.000 0.000 -0.704 0.497 0.000 0.000 -0.696 -0.696 -0.660 -0.660 0.000 0.000 -0.732 0.000 0.452 0.452 -0.262 -0.262 0.596 0.596 0.677 0.000 0.420 0.420 -0.695 -0.713 -0.738 -0.754 -0.754 -0.181 -0.181 0.298 0.298 -0.156 -0.156 0.530 0.530 0.000 0.000 0.107 0.520 0.000 0.000 -0.704 0.497 0.000 0.000 -0.696 -0.696 -0.660 -0.660 0.000 0.000 -0.732 0.000 0.452 0.452 -0.262 -0.262 8.3591095 NA 5.9978434 10.9797703 11.5075702 5.6444937 9.7126474 5.6547964 9.9291652 NA 12.3317442 12.8026723 3.6402970 NA 0.6402507 8.4773936 3.6402970 8.5531808 11.9121435 11.0425930 10.2641729 4.8626845 10.4673695 10.6218587 5.7557689 9.4117809 NA 2.0553345 9.1910382 3.0553345 5.0997244 6.8882184 8.1999873 9.9498738 9.9644720 0.0553345 9.5983607 4.6099204 8.6608085 13.6782959 8.0440137 9.1910382 NA 2.0553345 8.5511841 6.7418296 3.8626795 NA 1.0553345 1.6402970 3.8626795 12.7491426 4.1846136 6.6175718 10.3800720 10.8197859 6.9256933 9.8185413 11.3747188 8.8546107 3.6402970 3.9133107 9.5310623 3.7557635 3.4476453 NA 6.8432314 11.037955 9.478445 8.477394 11.020031 8.831762 11.195839 5.783250 10.866704 9.276916 10.066556 12.599810 11.559651 7.072137 8.939500 2.862689 8.347651 9.372741 10.5024122 12.0007728 2.8626894 14.6485701 8.8675061 4.4476453 9.2202359 10.3407312 10.3755992 3.3772626 4.6991851 11.0496824 12.7191094 0.6402507 8.6289762 10.6089583 7.9253545 12.2614275 9.1106115 9.8077096 7.5749651 9.2402044 4.5471845 4.6700415 10.5232859 9.5581607 9.6051135 11.2126758 9.4095783 10.8667036 10.4904783 10.2233742 6.3314526 NA 7.0027025 5.7135391 10.1160248 4.9622205 11.1058578 6.1106117 11.3636679 7.2937337 8.1794503 15.3034974 11.0918460 10.3772571 13.4936660 11.0272317 0.0553345 0.6402507 9.8301160 7.7832491 9.0997231 TCGA-A2-A04V 39 1 1920 NA breast stage iia t2 n0 (i-) m0 female 2005 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 NA 2 2 1 1 2 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 2.427581e-07 20.8333333333333 25 0 33.3333333333333 20.8333333333333 10.3211196 9.3063415 11.7798829 7.6587670 8.4859307 8.8299843 10.0321234 9.8751219 9.3663489 12.7784613 12.3165178 10.4097712 1.2895394 13.3311355 2.6114557 9.2476026 5.7379950 8.5764760 7.6500149 13.7452458 0.2894804 15.4012396 1.5119234 8.2676528 10.6430478 5.3769953 -1.2954821 9.3220383 9.0287515 1.8744822 8.5547577 6.0532982 NA 3.7489657 9.1423228 9.6839960 10.0516386 11.0180208 8.8209148 10.5741647 8.5578803 11.4955302 14.7730972 7.1550813 11.9909842 10.6649349 10.9830203 4.7269402 -1.2954821 8.3681288 10.1113073 -1.2954821 10.9158508 9.4859305 5.5500603 5.0796085 10.2805827 12.8083504 10.9048565 11.6780889 13.0022036 7.5594390 11.2009253 10.7963434 11.0979613 10.7523764 3.9525013 11.8962470 12.7738528 1.0265168 10.3434592 8.8707340 3.3489972 4.6587656 10.7683029 10.3627823 10.0382853 9.2668132 1.5119234 6.4050104 12.3527037 10.4380099 10.1742126 10.2490524 -0.00102400 -0.00069303 -0.00719580 -0.00719580 -0.02320300 0.00106060 0.00750000 1.50860000 2.78060000 0.81552000 0.77195000 0.01656500 0.01656500 0.01516800 2.48810000 0.02777800 0.00471900 0.00471900 -0.01006500 0.00930980 0.03538300 -0.81170000 0.03990200 0.03990200 0.05138700 0.05138700 0.05138700 0.04160000 0.05494500 -0.00102400 -0.00622860 -0.00719580 0.00263570 -0.02320300 0.00106060 -0.01794100 0.01349200 -0.00912860 0.00499690 -0.00235530 0.00000000 0.00208050 0.00597000 0.00597000 0.00597000 0.04384900 0.01656500 0.05110300 0.02707600 -0.10368000 -0.83041000 -0.83041000 0.00471900 0.00471900 0.00471900 -0.01006500 0.02862200 0.02075400 0.02902300 -0.83260000 -0.81170000 0.03990200 0.01447000 0.05138700 0.05138700 0.04160000 0.01796300 -0.81260000 -0.81260000 0.000 0.000 0.000 -0.782 0.000 0.000 0.000 0.000 0.000 0.060 -0.792 -0.812 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.813 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.782 0.000 0.000 0.000 0.000 0.000 0.060 -0.792 -0.812 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.813 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 0.000 0.000 0.000 0.000 0.000 9.0014870 NA 5.5749341 10.6645728 11.3183603 7.1930542 10.0850319 8.6651955 8.8818781 2.9525013 11.6832813 11.1786545 2.4050121 2.7920432 3.5119234 7.8389971 4.8338515 10.0377262 11.4354655 10.5135350 9.7220752 3.4050121 8.6616730 10.5050663 5.8844807 6.8286925 NA NA 10.1350234 7.5563198 6.9237399 7.2514654 5.7920328 10.8694118 10.6634860 1.7045622 8.4875692 NA 7.1350238 12.3897576 8.6456184 7.7652669 -1.2954821 -0.2954821 8.2379007 4.2895320 4.3192783 1.7045622 3.7045732 5.7598536 2.7045622 10.5492766 -1.2954821 6.6932556 10.5845370 9.8782479 4.5625538 9.3805279 11.4567424 7.7840557 2.9525013 3.2895394 10.7635772 3.9525013 0.2894804 0.7046064 0.2894804 15.9199103 5.4859291 8.6189559 13.3311355 10.5425929 9.9876592 13.7452458 13.0264285 9.0037102 10.3174393 12.6317932 10.7726773 8.3681288 7.8286919 0.2894804 7.4222473 10.4969544 11.148291 12.430257 6.971357 13.900824 9.024243 4.511923 10.385809 8.304484 10.808203 5.823512 4.405012 12.316518 5.844122 NA 11.506279 7.224207 6.295607 11.612588 10.238387 10.691479 9.340289 9.389319 10.109180 4.485929 14.109789 10.051639 11.003206 10.032685 11.510718 8.670355 10.570691 10.279164 7.781387 NA 8.534531 6.737994 10.111307 2.164014 10.915851 7.836428 10.996029 10.280583 6.676115 15.208412 10.459041 10.046090 12.399364 11.131622 2.164014 1.874482 9.806547 9.479358 9.748965 TCGA-A2-A04W 50 0 NA 3102 breast stage iib t2 n1mi m0 female 2005 NA no other, specify 1 white not hispanic or latino 3 2 3 NA 5 1 2 2 5 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.705019e-06 7.976338e-07 12.7450980392157 65.6862745098039 2.94117647058824 14.7058823529412 3.92156862745098 8.2641747 8.6393671 11.1397959 8.3017148 8.4672412 8.6236427 10.7334840 10.1887055 12.2031601 13.9748179 10.2418170 10.2360113 2.1118993 16.5829856 0.6968841 11.4259067 6.1779796 7.4517403 10.0389271 12.9270731 NA 10.0463181 7.7485149 9.5043576 9.9111716 6.9760760 0.6968841 8.5548336 11.3493987 2.5713128 6.6354526 6.0187810 NA 4.5042072 9.6077449 10.4738338 9.5926802 9.0514692 11.7920297 11.1147050 NA 7.6393668 15.3782007 7.9798482 10.0884541 10.0285158 10.1453129 4.6037450 6.6275893 8.4782122 12.4483965 0.6968841 10.7334840 5.3407082 4.6664782 5.1993543 9.8372563 10.9601216 9.4836667 12.6314034 12.3676562 7.9192447 10.8218354 9.8617594 10.6374108 10.9280737 2.6968618 11.5122358 10.4400039 -0.8881674 10.6583022 8.8226964 2.8123339 3.0187766 10.5355311 9.5936893 10.1189172 8.9095514 1.1118993 10.2824410 13.6930906 11.8480805 9.0891700 9.3763325 0.2635000 0.2638200 0.0039660 -0.0120820 3.6569000 0.2390100 -0.2326900 3.6569000 -0.0570370 -0.0570370 -0.0570370 0.0029939 0.9252500 0.1978000 0.0000000 0.0000000 0.0624480 0.0624480 0.0384290 1.4621000 -0.2370900 -0.2478100 3.6569000 -0.0916070 0.0577360 0.0577360 0.9468200 0.2232300 -0.2248100 0.2635000 0.1615400 -0.0078454 -0.0092950 -0.2466000 -0.2367200 -0.2367200 -0.2326900 -0.2326900 -0.2301800 0.2275500 0.2324100 -0.0570370 0.1371100 0.1371100 -0.2379500 0.1387400 -0.1938000 0.0018836 0.1978000 0.0000000 0.0000000 0.0061897 0.0624480 0.0624480 0.0142710 0.0120390 -0.2333000 -0.2333000 -0.2370900 -0.0060102 -0.2478100 -0.4895700 -0.0151110 0.0577360 0.0577360 0.0163670 -0.0167620 0.2172300 0.2079200 0.000 0.000 0.198 0.000 0.000 0.000 0.000 -0.233 -0.237 0.000 0.000 -0.248 0.000 -0.469 -0.469 0.000 0.000 0.264 0.264 0.000 0.223 0.000 0.208 0.000 0.123 0.000 0.000 0.000 -0.237 0.002 -0.237 -0.233 -0.233 0.228 0.228 0.000 0.000 0.137 -0.101 0.000 0.000 0.000 0.000 0.198 0.000 0.000 0.000 0.000 -0.233 -0.237 0.000 0.000 -0.248 0.000 -0.469 -0.469 0.000 0.000 0.264 0.264 0.000 0.223 0.000 0.208 0.000 0.123 0.000 0.000 0.000 -0.237 0.002 -0.237 -0.233 -0.233 0.228 0.228 0.000 0.000 0.137 -0.101 0.000 0.000 8.0426274 3.4338141 5.9063062 10.2405288 10.8588241 5.7652377 11.4937033 8.4747106 8.9558112 -0.8881674 15.8448258 11.6327468 3.6354526 NA 3.5042136 7.8997925 2.8123339 10.2164887 11.7127321 10.6092428 8.9447800 5.3017157 7.4955944 10.4405649 6.6587842 2.6968618 3.3598163 NA 10.8858534 4.4694432 7.9884069 8.3017148 7.1833525 9.6892338 9.6491083 1.4338141 9.0247793 NA 7.4650366 12.7297018 6.4156708 9.1019940 1.1118993 6.5548329 7.1342579 4.4694432 4.8932506 1.9192638 3.1118827 5.1874233 0.6968841 12.1885386 3.9192447 9.8817278 10.1034119 10.0112468 4.4694432 8.9095514 12.0662681 6.9447800 2.4338141 4.1562833 9.9087407 3.1993583 NA 1.4338141 4.6968507 12.339930 8.826136 11.709244 16.582986 10.023282 11.360707 12.927073 9.338302 8.490207 10.485843 13.119706 9.750326 8.478212 9.149437 NA 6.619684 10.598222 11.7173695 13.3064930 3.9192447 15.3108897 9.1411773 5.3407082 9.3786766 6.6117360 10.3132911 4.9192447 5.4156708 10.2418170 9.6864835 3.5713249 9.9550259 7.2308313 6.9619520 13.0259013 10.4705411 10.7516829 7.7412465 9.5579394 8.9431973 4.4694432 10.4612210 9.5926802 10.2039864 10.1698817 9.8726099 9.7674208 8.1090695 10.5386789 8.8634340 7.1286986 9.8305941 9.2311295 12.4483965 5.9945322 10.7334840 7.8295661 10.9772366 9.8372563 6.8192492 14.1485358 10.1576496 10.4847550 11.4483966 11.0055707 1.1118993 0.1118326 10.1280018 9.3358916 9.0631748 TCGA-A2-A04X 34 0 NA 1686 breast stage iia t2 n0 (i-) m0 female 2006 NA no infiltrating ductal carcinoma 0 white NA 3 2 1 NA NA NA 2 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 3.121176e-07 12 60 8 16 4 9.6259344 9.4879041 11.6455453 7.5668212 9.0524439 9.7591234 9.1499541 9.9056551 8.9739516 14.0971941 10.0252550 10.8210864 2.1128669 16.0396085 3.2283416 8.4615928 5.0670621 8.5763891 5.2827882 13.3180470 0.7879339 13.3804317 5.4227208 10.8149392 10.1896803 8.9852830 0.5278711 9.9520371 11.8215175 NA 7.7226593 6.1932375 NA 6.0277490 9.1380042 10.0519542 9.8749698 10.6409932 8.7251188 9.9975441 1.9873209 8.9383534 14.6421326 8.3568639 9.3528609 10.8710879 9.6040498 3.6571827 1.1128336 8.5763891 10.0031290 NA 11.4519724 5.6571855 6.7663063 5.2003278 9.7452541 11.8232407 9.7698853 11.5051821 12.5886825 5.8498292 10.0617186 9.4872377 10.9279811 10.6763788 3.5278961 11.6229695 11.6759020 NA 10.1481220 7.8543317 3.6982296 5.7373569 10.6367533 9.0930042 10.1356948 8.8339640 2.6978183 5.4820996 12.0557457 11.6072203 9.1100442 8.7312501 3.6569e+00 5.3169e-01 1.6783e-02 3.2422e-02 3.2760e-02 2.9466e-02 5.2923e-01 -5.4421e-01 -5.9522e-03 -5.9522e-03 2.3286e-02 -2.1610e-03 -2.1610e-03 1.2331e-01 -1.0646e-02 -1.0646e-02 4.5838e-05 2.0343e-02 -5.3764e-01 -5.1227e-03 -6.9195e-03 -7.6678e-02 3.6569e+00 1.1223e+00 -1.0880e-01 -1.0880e-01 -1.0880e-01 4.7306e-01 -1.0145e-01 1.7124e-02 1.8523e-02 1.6783e-02 3.2760e-02 5.1956e-02 2.7887e-02 2.3145e-02 5.3731e-01 -5.4421e-01 -5.4421e-01 -5.9266e-02 -5.5557e-01 -5.5307e-01 1.0842e-02 1.0842e-02 1.0842e-02 -8.6120e-02 -3.1859e-03 -3.1859e-03 2.2638e-01 1.2331e-01 -5.6575e-01 -5.6575e-01 4.5838e-05 2.0343e-02 -4.3466e-02 -5.3764e-01 -5.1227e-03 -5.1227e-03 -1.5329e-02 -3.5312e-02 -7.6678e-02 -6.1873e-01 -5.3896e-01 -1.0880e-01 -1.0880e-01 4.2755e-01 3.3127e-02 -8.3200e-02 -8.3200e-02 0.000 0.000 0.123 0.000 0.000 0.000 -0.538 0.000 0.000 0.000 0.000 0.000 0.000 -0.550 -0.550 -0.109 -0.109 0.000 0.000 0.473 0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.545 0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.123 0.000 0.000 0.000 -0.538 0.000 0.000 0.000 0.000 0.000 0.000 -0.550 -0.550 -0.109 -0.109 0.000 0.000 0.473 0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.545 0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2944312 NA 7.0036360 10.6770142 10.6953203 7.0246366 12.0107102 8.0819153 9.0135203 -1.4719288 12.3256650 12.1946965 1.5279211 0.8498392 -0.4721289 8.0416296 4.2283416 12.9487177 11.3186579 9.4452742 9.7355267 3.6978294 8.7373555 9.9425874 7.9852830 1.3352546 1.1128336 NA 11.5365059 6.9072801 4.6978294 8.7805677 5.3982683 9.8535505 10.8515200 3.2283416 8.5377309 NA 7.0553790 12.6730383 8.7078112 8.2794462 0.5278711 2.6978183 7.7519042 6.9625305 2.7758302 NA 6.9955083 5.8410573 4.5279023 11.0064191 1.8498392 6.2003278 11.3308224 9.9990693 6.0277490 10.1649798 14.3489537 8.4733461 5.7946888 4.2003239 9.9919373 3.6153692 -1.4719288 0.5278711 3.6571827 13.2543737 7.0592839 8.6584729 16.0396085 9.9105263 9.9980526 13.3180470 10.9832294 8.8832533 10.2034182 15.7490928 9.3360620 8.5763891 9.5229626 0.5278711 8.5250819 10.8627341 10.8279687 12.4048028 5.8225237 13.6891502 8.3749595 7.4791869 6.0197553 8.1466181 9.5324317 7.7078112 8.1166169 10.0252550 5.2421490 NA 11.1252565 2.6153692 8.1856139 9.6706474 10.8596589 11.1782808 8.1147418 10.0262529 8.6712856 7.2927735 11.7355450 9.8749698 11.1354637 10.4748085 9.7015794 8.7494894 10.2417183 10.6439212 6.9287813 -1.4719288 8.8521952 9.5942875 10.0031290 9.1825381 11.4519724 5.7470705 10.8353877 9.7452541 7.8699769 14.2310206 10.4051864 9.7615218 11.5349295 9.8898460 5.5722955 -0.1502409 9.8616166 10.5215482 9.0622051 TCGA-A2-A04Y 53 0 NA 1099 breast stage iib t2 n1mi m0 female 2008 NA yes infiltrating ductal carcinoma 1 white NA 3 2 3 NA 2 2 1 2 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.040392e-07 7.69230769230769 23.0769230769231 3.84615384615385 34.6153846153846 30.7692307692308 10.540898982 9.641924210 11.468653670 8.064193062 9.022107827 9.874122235 10.452382826 10.901632018 9.555405125 14.406379106 11.468483381 10.882839343 1.227679474 12.860297804 3.629787907 9.427364390 5.658742754 9.126832993 10.838716796 13.302884635 4.742264967 13.148204399 3.777893084 9.651864324 11.047643012 5.829727808 0.005328121 10.227949686 11.596821962 0.420293749 8.127696211 6.859128476 NA 4.005301170 9.483057962 9.908177176 9.113823934 10.706894841 9.767958472 11.340317690 9.217187813 10.750973898 13.958738251 8.664379726 9.062388889 10.187693899 10.886668492 3.705734668 7.661128204 8.556046542 10.858609161 NA 10.678903170 4.687122293 7.178560286 4.397618165 10.730381824 12.131251146 10.561486338 11.555084261 12.990252038 7.673002305 11.151443955 10.053818252 11.608616837 10.930854034 3.629787907 12.299537425 9.050604269 NA 10.050149034 8.904152890 4.944211899 6.459256189 10.632225403 9.965301478 11.164750522 9.829197562 1.742264967 6.085673214 11.946836331 12.179913256 9.891504249 9.366512375 0.40194000 0.91016000 0.00000000 -0.05428600 -0.00678130 -0.00774820 0.00972760 0.00972760 -0.56595000 -0.55236000 3.65690000 0.01070300 0.01070300 -0.02205800 -0.02205800 -0.02205800 0.00291330 0.00291330 -0.00954260 0.01117500 0.01488800 -0.54239000 0.01670500 0.54806000 0.03665300 0.03665300 0.03425400 3.65690000 -0.09432800 -0.13897000 -0.56863000 0.00930980 0.02398700 -0.01244700 -0.00774820 -0.00774820 0.06923900 0.00972760 0.00341260 -0.00097017 -0.00097017 0.00166420 -0.00725800 -0.00725800 -0.49590000 -0.01106000 0.01070300 0.01070300 -0.02205800 -0.02205800 -0.02205800 -0.02205800 0.00291330 0.00291330 0.00291330 -0.00954260 0.00833510 0.00833510 0.01488800 0.03059100 -0.54239000 0.01670500 0.00944910 0.03665300 0.03665300 0.01195800 -0.00138580 -0.52420000 -0.54421000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.542 0.000 0.000 0.000 0.000 0.000 0.402 0.402 0.000 0.000 0.000 -0.542 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.076 0.476 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.542 0.000 0.000 0.000 0.000 0.000 0.402 0.402 0.000 0.000 0.000 -0.542 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.076 0.476 0.000 0.000 0.000 0.000 8.8909959 1.8797842 6.2468850 10.8350223 12.1887282 7.4692869 10.3358431 8.2765292 9.3602763 3.4203342 12.0215275 11.6754277 4.4647336 4.2016966 5.4090209 7.8756646 4.2276949 10.4671201 11.5866571 11.2579650 9.5971335 5.5496199 9.0909934 10.4206892 7.3861212 7.0460457 4.0350432 NA 10.5993131 5.5802088 7.8233494 8.0641931 9.9517186 10.1999826 10.6935499 3.0641931 7.8736078 0.4202937 6.6824314 11.6089260 9.5038164 7.7218333 NA 6.8339653 8.6918000 0.7422650 3.6297879 NA 6.7557275 5.8299814 2.0052922 10.9362833 3.0641931 7.6847795 10.8810489 9.9335712 4.8632794 10.1177391 12.9102478 9.0909934 2.9439026 3.4647336 11.9473253 2.2276795 -1.5794906 0.7422650 -0.5797063 13.391782767 7.188521593 9.054240444 12.860297804 10.693278815 11.689025309 13.302884635 11.791160690 8.515734131 10.222449581 12.803771412 10.246885573 8.556046542 8.925156216 0.005328121 7.513094329 14.393810266 10.771828480 12.416987113 5.351073503 12.162012635 8.530167917 7.020249937 9.787751917 8.671819495 10.168794197 7.250059607 9.602110534 11.468483381 7.201696586 0.742264967 10.833171565 5.064193062 9.030706858 9.450314507 11.158218164 10.967472620 8.916192078 10.494478615 9.573889131 5.959496611 13.749634174 9.113823934 10.495816261 10.068694723 11.984605691 9.129420839 10.218403883 10.550585868 8.027667186 NA 9.176451436 7.116887664 10.858609161 6.600245962 10.678903170 5.035047596 11.437735378 10.730381824 7.351074386 14.127804084 10.696170608 10.606451297 11.443051694 10.404043278 0.005328121 2.301997279 10.802150394 10.204153803 10.425961610 TCGA-A2-A0CK 60 0 NA 4159 breast stage iiia t3 n2a m0 female 2001 NA yes infiltrating lobular carcinoma 4 white not hispanic or latino NA NA 3 1 2 2 6 4 4 4 6 2 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 3.467973e-07 45 25 5 15 10 9.7142455 8.7640339 11.6936277 6.7906039 8.7024002 8.3843149 10.3838788 9.6336190 11.0418527 9.5964533 12.4139911 10.3026735 3.2161289 13.3644995 3.1520049 9.9889141 7.5994621 8.5047487 8.8910166 13.0196328 0.2775087 14.5032435 6.2924836 9.5586140 10.1035527 4.8423202 NA 10.0583471 9.5835956 NA 9.2249273 6.4607557 -1.3075728 3.4474602 9.1156875 10.1225012 9.9843178 10.7693870 9.4549536 10.7024001 11.6173840 10.8916303 14.6543829 6.7973801 10.6485845 9.8302030 10.4950878 5.9779736 1.0144981 7.7314908 10.5404118 -1.3075728 10.6155275 4.8624960 5.3219281 4.6925723 9.9831663 12.0691039 10.5250660 11.7813597 12.2360867 8.7024002 10.8098899 10.9871922 10.7002996 10.7529297 3.4474602 11.8868666 12.3069362 -0.3073943 10.4950878 8.9273889 3.9043589 4.4474602 10.5896606 9.7177110 10.4281275 9.1611956 5.5873890 7.4441154 12.9294079 12.1498241 10.2180923 10.3680876 0.68347000 0.69914000 -0.00332430 -0.00332430 -0.00512270 0.01140000 -0.00539920 -0.00539920 0.00471900 0.00471900 0.00471900 0.00499690 0.00499690 0.08449800 3.65690000 -0.68997000 -0.00124730 -0.00124730 0.00000000 0.00000000 0.00930980 -0.68970000 0.08045600 0.08045600 0.00485790 0.00485790 0.00485790 0.01572700 0.00235810 0.00235810 0.00041593 -0.00332430 -0.00512270 -0.00512270 -0.00705760 -0.00705760 -0.00539920 -0.00539920 -0.34607000 -0.00387790 -0.00664320 0.00471900 0.00458000 0.00458000 0.00458000 0.00958830 0.00499690 0.00499690 0.08449800 0.06565600 -0.69626000 -0.69626000 -0.00124730 -0.00124730 -0.00124730 0.00000000 0.00000000 0.00000000 0.00930980 -0.72491000 -0.69557000 0.08045600 0.01880300 0.00485790 0.00485790 0.01572700 0.00541390 0.01586600 0.01586600 0.000 0.000 0.000 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 -0.725 -0.690 -0.690 0.000 0.000 0.000 0.000 0.000 0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 -0.725 -0.690 -0.690 0.000 0.000 0.000 0.000 0.000 0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6158988 NA 6.9871924 11.6721753 11.4827163 8.3363012 11.6890450 7.8241969 9.3709251 2.3930043 12.2070390 11.3000590 5.3649961 3.0144981 2.9405051 7.6496737 3.8625010 10.8464401 10.5329561 10.6358189 9.3191932 5.2003670 8.3219281 10.7810285 7.5380616 8.0368676 NA -1.3075728 10.3328164 6.9593575 6.6981962 8.1437827 6.9963526 10.8539994 10.7997886 4.9779759 9.2423562 NA 7.7396956 13.3365967 8.9393121 8.4999264 -0.3073943 -0.3073943 8.5349219 1.8625109 4.9963526 NA 6.1601780 4.6240190 2.9405051 10.3672052 2.0144981 8.2122079 10.5851143 9.4541226 6.2548132 9.6372835 11.1629762 8.8192760 4.2775310 4.5994606 10.3431745 -1.3075728 0.6926057 1.0144981 2.8624911 15.3443899 5.1355143 8.4441154 13.3644995 10.4967025 10.2845612 13.0196328 12.4681817 8.5660156 10.1375863 13.1874271 11.6264465 7.7314908 8.2180924 0.6926057 8.1924176 11.0808579 11.2290615 12.1291529 6.6641144 12.9481135 9.0730327 6.8823961 9.7072894 7.9117401 10.4818280 7.0676108 7.4739314 12.4139911 6.9686956 NA 10.2185816 10.8671851 6.9069387 9.3091202 10.2008615 10.2190707 7.8749660 10.1550737 8.5873894 4.9779759 12.1166065 9.9843178 10.8995858 10.5043476 10.3169101 9.7806972 10.0864981 10.4958954 6.9020253 NA 9.1574745 6.4127815 10.5404118 5.9020253 10.6155275 5.2161328 11.5871998 9.9831663 6.6869249 14.8149142 10.2868960 9.8385037 12.5378655 11.3357513 0.6926057 -0.3073943 10.0026162 8.7600060 9.7620212 TCGA-A2-A0CL 37 0 NA 3015 breast stage iiia t3 n2a m0 female 2006 NA yes infiltrating ductal carcinoma 9 black or african american not hispanic or latino 2 2 4 NA 4 3 7 4 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.387189e-07 27.7777777777778 38.8888888888889 5.55555555555556 5.55555555555556 22.2222222222222 10.4104600 10.1540111 11.6764707 9.8815596 8.6422510 9.9539720 9.2173657 10.6294808 10.4311343 13.6411633 11.3523355 10.6111370 2.5681051 11.5282926 3.2685542 9.4423225 5.6555722 9.3371210 12.1836243 11.2947536 -1.4320652 12.5814323 4.0275433 9.6675824 10.4888347 4.4507560 0.5681294 11.5679106 10.1638333 3.9943715 9.0151928 7.6315045 1.3754565 5.8627316 10.7582430 10.5977420 9.7286114 10.3604932 9.4869730 11.3609000 2.3754565 7.9943744 15.1238821 8.6834786 9.4009838 11.5994663 11.2939019 4.4260903 5.4507527 9.5482491 12.0233084 NA 10.6938460 6.9168373 8.7417868 5.5106234 10.6818518 11.7303436 9.6844536 11.9090724 12.8190002 7.7102168 11.0224089 10.2367376 11.3360871 11.3590690 5.1974644 11.2860002 11.1166908 1.1530919 10.4955173 9.2119659 3.6190491 8.0639645 11.0982721 9.9393418 10.8222525 10.2088064 3.2685542 6.5849174 12.6754902 12.6109660 10.2973055 9.5765382 0.0662290 0.0662290 -0.1712000 0.0363700 0.4168600 -0.1206900 0.0000000 0.0000000 -0.2225600 -0.2225600 0.1971000 0.0716780 0.1801100 -0.0572500 0.7368200 1.1227000 0.0533890 0.0833420 -0.1229100 -0.0698670 -0.1218700 -0.0086494 -0.0086494 0.0670880 0.0091705 0.0091705 -0.0421100 0.5253800 -0.0302300 -0.0302300 0.0488300 -0.1712000 -0.2419200 -0.1506700 -0.0773920 -0.0773920 0.0000000 0.0000000 0.0199230 -0.0807960 0.0549450 -0.2225600 -0.1913600 -0.0355850 -0.1046200 -0.1046200 -0.1184800 0.2024400 -0.0572500 -0.1261600 -0.1353600 -0.1353600 0.0774300 -0.2818000 0.0700990 -0.0312230 -0.0698670 -0.0698670 -0.1222100 0.0712480 -0.0086494 0.0670880 0.0642250 0.0091705 0.0091705 0.4614400 0.0081959 0.1306600 -0.1478500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.525 0.525 0.000 0.131 0.000 0.000 -0.108 0.000 -0.195 -0.195 0.000 0.000 0.000 0.000 0.000 0.000 -0.080 0.143 0.000 0.000 0.190 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.525 0.525 0.000 0.131 0.000 0.000 -0.108 0.000 -0.195 -0.195 0.000 0.000 0.000 0.000 0.000 0.000 -0.080 0.143 0.000 0.000 0.190 0.000 7.8764488 7.1417567 5.4507527 10.0778847 11.0970521 5.6674040 10.0182899 10.4617146 8.8621904 4.0275433 12.1668601 11.4675893 4.0916744 4.4988444 4.8718880 8.6015327 4.6341983 12.2554853 11.0208657 10.4712384 8.8089011 3.9943715 8.0719353 10.1408098 9.9458624 6.2047335 4.9943761 NA 10.9090724 4.6973902 6.9474885 8.0151931 9.0295890 10.6386667 10.2361082 6.1303523 9.0120893 NA 7.7775631 12.3932672 8.6070288 7.4899507 0.8900186 2.3754565 7.9344316 NA 5.7380355 -1.4320652 8.9625724 4.2119623 5.8442350 10.6375594 2.4750070 8.9593532 10.1441215 10.0053416 7.2754690 11.6930387 14.7451982 10.0336760 6.2823545 6.1226976 10.2737420 1.7380328 -1.4320652 -1.4320652 1.3754565 12.673178 7.261597 9.545390 11.528293 10.312103 10.168487 11.294754 10.182359 9.893415 11.050918 13.600586 10.796928 9.548249 8.201105 1.153092 7.548249 11.412031 10.9705888 11.6470943 4.3229953 13.7901487 8.8809925 9.4651988 8.3028194 9.5081368 9.9955115 9.6805492 8.1680227 11.3523355 6.9817374 0.8900186 10.8237284 5.9256624 8.9719099 10.6730360 11.5430619 10.1111414 7.7102168 8.0234367 10.6944914 9.6542459 11.6619547 9.7286114 10.4701078 9.4221989 11.1670926 10.2209546 11.4581839 10.2497873 8.9034999 7.6475944 9.6300749 9.9159747 12.0233084 9.8655992 10.6938460 5.1828194 10.8804254 10.6818518 7.9604700 13.3439694 10.2637729 10.2209546 12.6183835 11.0265162 8.3296609 3.9604283 10.6720530 9.7260880 9.2874984 TCGA-A2-A0CM 40 1 754 NA breast stage iia t2 n0 (i-) m0 female 2003 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.040392e-06 3.467973e-07 10 55 5 25 5 10.4581145 9.3510536 11.8122453 9.1605917 8.2896086 9.4467097 9.7724494 11.1535940 12.4039807 13.0995452 10.6221371 10.5969943 0.8844807 11.1474430 2.2063932 10.2030101 7.6191767 8.6543052 9.8588819 5.7913583 NA 7.7362166 5.9612830 9.4245953 10.8089087 6.8674604 1.2063932 12.5094912 11.6650071 -0.1155974 9.6038561 8.1180871 -1.1155974 5.2420194 9.1132861 10.5005566 9.1721797 9.9897210 10.0131061 8.8152046 1.2063932 8.8717312 15.2517285 8.9582073 8.9982093 10.7792851 10.3263740 4.5283213 NA 9.6707370 10.2120199 NA 11.4440834 6.1418558 7.5568923 8.0865911 9.1252587 12.2770530 9.9545882 11.8218411 12.8201848 6.0137503 10.8170512 10.4902107 11.4107220 11.5722803 5.3107327 12.2609997 9.8900919 NA 10.3403082 10.0437080 3.6020055 6.4001673 11.7171596 9.5019347 11.0118169 10.4996371 1.6918021 6.6055669 12.1101266 11.6059938 9.7126039 9.7006509 1.1290000 -0.0705360 0.3184400 0.5521300 -0.0224690 -0.2580500 0.2460300 0.5387200 0.4241900 0.4241900 1.3394000 1.2114000 0.3241400 0.1256400 -0.3353700 -0.3353700 -0.0521260 0.3699400 -0.2338600 -0.0963080 -0.1042100 -0.2714000 -0.2714000 -0.2714000 -0.2920100 3.6569000 0.0161460 0.5390700 0.1425100 0.1739200 -0.0063668 -0.2383800 -0.2523700 -0.5482400 -0.3021600 -0.3143600 0.2460300 -0.1227800 0.5128100 -0.1115500 -0.1104800 0.2788400 0.5065400 0.5065400 0.1610000 -0.0799450 0.3241400 0.2668300 0.1571100 -0.3353700 -0.3638900 -0.3638900 0.0202030 0.1664000 0.3247900 -0.6777300 -0.1046000 -0.0762780 -0.1266800 0.3157900 -0.7402000 -0.2714000 -0.2362900 -0.2920100 0.0161460 -0.4583200 0.2858000 -0.3113900 -0.3048700 0.324 0.324 0.109 -0.227 0.000 0.000 -0.678 0.000 -0.127 0.282 0.282 -0.306 -0.306 0.278 0.121 -0.292 -0.292 0.506 0.506 0.520 0.520 0.255 -0.305 0.000 0.000 0.477 0.477 -0.162 0.000 -0.302 -0.302 0.246 0.246 0.000 0.000 0.622 0.622 0.507 0.000 -0.027 0.275 0.324 0.324 0.109 -0.227 0.000 0.000 -0.678 0.000 -0.127 0.282 0.282 -0.306 -0.306 0.278 0.121 -0.292 -0.292 0.506 0.506 0.520 0.520 0.255 -0.305 0.000 0.000 0.477 0.477 -0.162 0.000 -0.302 -0.302 0.246 0.246 0.000 0.000 0.622 0.622 0.507 0.000 -0.027 0.275 8.1228720 -0.1155974 4.0939235 10.7467172 11.4131656 6.4974830 11.0172883 9.3369247 7.8904005 NA 12.7002508 11.9224637 2.4694172 NA 4.2420156 9.9798643 3.9288630 11.8203690 11.6428987 11.0487458 9.5092627 0.8844807 9.9805235 10.5520224 7.1882476 4.0939235 3.0543970 -1.1155974 10.8317390 0.8844807 7.4390563 8.2507897 6.6658276 9.7163920 11.0966597 2.4694172 9.4797247 NA 6.4313622 12.0378610 7.8731519 7.3962203 NA 2.3438910 8.0718195 4.9288630 2.2063932 0.4694693 7.4731821 2.2135961 7.9772244 10.9831574 4.8386644 8.9096069 10.8266152 10.9612829 5.0543927 9.9417821 13.6097803 8.6723698 4.4991762 4.6123879 9.9632852 1.4694172 2.0543970 NA 5.5283244 12.491682 10.719728 8.041814 11.147443 9.307583 10.506977 5.791358 10.566584 8.427499 10.594843 14.179483 12.973173 9.670737 6.343898 -1.115597 7.356143 11.569873 10.7655812 11.7975437 5.3274107 13.5798582 9.3783228 8.0367522 8.6225596 8.8745714 10.2935983 8.1442106 5.0543927 10.6221371 10.7054440 0.4694693 11.0718194 8.5692157 10.0608151 13.0975715 11.2156642 10.3922619 8.1882481 9.6191769 8.8872822 8.0841398 11.0471041 9.1721797 10.4153613 9.6788832 12.6524448 11.6950389 11.4818215 10.5948433 8.9343160 NA 9.4324028 7.4694302 10.2120199 8.0914814 11.4440834 7.6918224 11.2546097 9.1252587 8.5265188 13.7422539 10.8592404 10.1629167 12.8026783 10.9959290 4.1698689 -1.1155974 10.4773915 10.1658177 9.4371364 TCGA-A2-A0CO 85 1 3492 NA breast stage iib t3 n0 m0 female 2002 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 6 3 4 3 6 2 4 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 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6.6294703 10.0916666 9.1659433 11.3818761 9.1939981 3.8700096 9.6788369 13.4363908 13.1088247 9.7400229 9.9100262 0.5324600 0.5789800 0.0011093 -0.0085047 0.0241950 0.0953630 -0.0849260 -0.0849260 -0.5959400 0.0987060 0.0987060 -0.0867840 -0.0867840 -0.2712900 -0.2712900 -0.2712900 -0.0154660 -0.0124380 -0.4506100 0.0315770 0.0000000 -0.5007900 0.0662290 0.0662290 0.0582240 0.0582240 0.0582240 0.0957980 0.0862330 -0.4881700 -0.0623610 0.0011093 0.0241950 0.0509610 0.0953630 0.0953630 -0.0849260 -0.0849260 -0.0849260 0.0421660 0.0214520 -0.5959400 0.0889820 0.0889820 0.0889820 0.0889820 -0.0867840 -0.0867840 -0.2712900 -0.2712900 -0.2712900 -0.2712900 -0.0154660 -0.0124380 -0.4909900 -0.4571500 0.0315770 0.0315770 0.0000000 -0.4960000 -0.5007900 0.0662290 -0.0563070 0.0582240 0.0582240 0.0966700 0.0946370 0.0736900 0.0901410 0.000 0.000 -0.271 -0.271 0.000 0.000 -0.451 0.000 0.000 0.556 -0.496 -0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.423 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.596 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.271 -0.271 0.000 0.000 -0.451 0.000 0.000 0.556 -0.496 -0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.423 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.596 0.000 0.000 0.000 0.000 0.000 8.3609471 3.1330374 6.5672762 11.3429624 11.1114149 7.8254028 11.7822156 10.4211090 9.4912671 5.4131540 12.1442722 11.5417043 4.1330456 4.2325840 4.0261272 7.2642896 3.4411647 11.5979310 11.2810978 10.8381013 8.8281904 4.4956120 7.3809727 10.6423487 9.5593098 8.5593098 -1.2591156 0.3257318 11.2303246 7.8281904 6.9206363 7.8334847 7.0168517 11.4941219 10.0010591 4.3845817 8.9081458 0.3257318 8.1330451 12.6196406 9.3664363 9.7372010 -1.2591156 4.4686485 8.1919386 NA 4.6476196 -1.2591156 7.3517520 5.7685231 4.8068190 9.9446872 2.0626398 9.8295158 10.2642895 9.3627793 7.5220871 10.9190811 12.7309201 9.2355830 4.7851216 4.8281898 11.3041621 -0.2592883 1.5480913 2.5480913 3.0626571 12.439669 4.468648 8.624898 13.399051 9.874512 9.798719 12.271012 12.523930 8.653183 10.336451 13.753701 12.420867 8.587785 8.277946 1.325674 7.264290 11.059270 11.670171 12.272718 6.875153 13.296753 8.528630 8.262328 8.069403 7.272109 10.263461 8.993393 8.802774 11.461613 7.423722 5.560908 11.054461 7.809506 6.538259 10.922190 10.954136 10.402951 7.900599 9.002822 11.228568 7.900599 12.432595 9.584649 10.483879 9.968945 10.884111 11.427666 9.724434 10.564095 8.686171 -1.259116 9.859552 8.397331 11.792616 8.461827 10.527814 5.859669 11.825536 9.728702 7.635545 13.457493 9.961106 10.488501 13.076537 10.866141 6.849252 1.548091 9.370084 9.886023 9.917524 TCGA-A2-A0CP 60 0 NA 2813 breast stage ia t1c n0 (i-) m0 female 2003 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 3 NA 4 3 3 3 6 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 17.8571428571429 25 0 39.2857142857143 17.8571428571429 9.772587 9.077389 11.284615 8.052109 8.374037 8.694215 9.841659 9.546874 10.933517 12.422576 10.616278 10.022665 4.280734 12.713203 3.422758 10.775899 5.651571 8.644339 8.296197 11.964333 3.670682 13.719884 6.930547 10.387815 10.840605 4.670682 NA 9.537796 9.978300 3.592672 7.712771 7.274501 NA 4.376950 8.817215 9.695382 10.072009 11.437470 9.347565 10.635249 4.744683 10.555252 15.380557 7.189149 10.629156 11.049830 10.502904 5.400032 2.230111 8.341616 11.705841 NA 11.238136 6.242932 5.037461 3.815073 9.955108 11.807266 10.932527 12.693486 12.439038 8.595180 10.809693 10.389258 10.500903 10.888829 3.882183 11.750586 10.626712 1.007698 10.672458 9.226883 4.517408 4.230111 11.464754 9.872933 10.263530 9.615045 2.592684 10.038382 13.347936 12.423281 10.003011 10.197539 -4.2472e-04 3.4598e-03 9.6176e-04 -7.4808e-03 -1.4099e-02 -7.7570e-03 1.5166e-03 -1.3523e-02 8.5125e-01 8.5125e-01 8.4146e-01 7.7694e-03 7.7694e-03 5.6462e-05 5.6462e-05 5.6462e-05 -4.7167e-03 -4.7167e-03 -8.4474e-03 0.0000e+00 2.5943e-02 2.1594e-02 2.1594e-02 2.1594e-02 3.5232e-02 3.5232e-02 3.5232e-02 1.3902e-02 1.2925e-02 -4.2472e-04 3.3210e-03 -5.6846e-03 2.2576e-02 1.3779e-03 -7.7570e-03 -7.7570e-03 1.1809e-02 -1.3523e-02 -7.2046e-03 -4.7167e-03 3.7376e-03 -4.6473e-01 7.4911e-03 7.4911e-03 7.4911e-03 7.4911e-03 7.7694e-03 7.7694e-03 1.1252e-02 5.6462e-05 2.6268e-03 2.6268e-03 -4.7167e-03 -4.7167e-03 1.6702e-02 -8.4474e-03 0.0000e+00 1.7256e-02 1.4181e-02 -4.3984e-01 2.1594e-02 2.1594e-02 -3.4724e-03 3.5232e-02 3.5232e-02 1.3902e-02 1.2976e-04 -4.3258e-01 -4.3258e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.388 -0.440 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.433 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.388 -0.440 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.433 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 0.382 0.000 0.000 0.000 0.000 9.199185 NA 6.052109 11.183057 11.792895 7.769177 10.775348 8.835682 9.153392 5.280734 12.367830 11.495458 4.066606 1.744678 4.007716 8.329643 4.177639 10.033777 11.061641 9.975422 9.549457 8.496894 7.562303 10.430481 5.992608 6.268242 2.744678 NA 10.659365 6.572500 7.143852 7.775899 8.684847 10.512805 10.193416 4.815068 8.365267 NA 7.411437 12.852421 8.823632 8.559743 NA 1.744678 7.670680 4.123194 5.815071 2.422744 4.007716 5.066610 2.007698 10.784148 1.007698 9.238136 10.514188 9.765938 5.230107 10.139572 11.386371 7.934505 1.744678 4.510215 10.480067 2.007698 NA NA 3.007716 12.7668320 4.0077158 8.6871951 12.7132034 10.2373350 10.5247281 11.9643331 12.3256928 9.2155427 10.0995911 12.9348756 10.7339331 8.3416158 9.0484613 -0.5773364 7.1506734 10.3393784 11.469194 12.344965 5.612577 13.611724 9.044804 5.977342 9.439561 6.478035 10.352292 6.150673 7.461672 10.616278 8.143852 4.007716 10.444426 7.557179 4.928645 11.611032 10.277621 10.296965 9.223652 9.892394 9.833204 5.007716 11.618534 10.072009 10.849541 10.483448 10.641316 9.720815 10.154072 10.630377 8.592678 NA 9.664378 7.341616 11.705841 6.984995 11.238136 7.762603 10.871901 9.955108 6.744680 14.809625 10.290031 10.518149 12.856468 10.905560 1.007698 1.422771 9.994505 9.329643 9.629767 TCGA-A2-A0CQ 62 0 NA 2695 breast stage ia t1 n0 (i-) m0 female 2003 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 1 1 2 NA 2 2 4 1 3 6 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 3.467973e-07 20.6896551724138 13.7931034482759 10.3448275862069 31.0344827586207 24.1379310344828 10.0135679 8.6713005 11.2723990 7.2191211 8.7368044 9.9032346 9.7148898 8.8639456 10.1689581 12.9122235 10.7583914 10.1955769 3.3732027 12.7114353 1.8371359 9.0964179 8.6040057 8.0426941 9.2043418 13.3351968 1.9746394 14.1301285 9.0803195 10.6325325 10.8959490 9.5116908 0.1001703 12.4119405 8.3047510 1.5152078 8.1169880 6.4982110 NA 1.1001703 8.4939279 9.9139611 10.7743721 10.1473038 8.5555071 10.5042570 2.4220984 10.1823289 14.6809488 8.9693315 10.1427513 10.8617311 10.7261930 4.2431359 8.8348894 7.6976119 11.6315613 -1.4847922 11.0063189 4.3731958 5.2156553 4.8189988 10.1193073 12.0514646 10.9547885 12.0000403 12.6445809 8.8382720 10.8771612 10.2780270 10.7355957 10.9219539 3.3732027 11.4885560 9.9777197 NA 10.7919234 8.4838843 3.6026825 4.9746486 11.1552363 9.4939279 9.9435775 8.7099743 2.2156475 8.4910654 13.5020371 11.0630759 9.9240778 10.0338705 1.01040000 1.01030000 0.01028500 0.01028500 0.01293400 0.01070300 -0.68624000 -0.68624000 0.00208050 0.00208050 0.00208050 -0.00798760 0.00000000 -0.00567570 -0.00567570 -0.00567570 0.00402430 0.00402430 0.01000600 -0.00152430 -0.01147300 -0.02000100 -0.02000100 -0.02000100 -0.02808100 -0.02808100 -0.02808100 -0.02041200 -0.00830050 -0.00830050 -0.00318590 0.01028500 0.01293400 0.01153900 0.01070300 0.01070300 -0.68624000 -0.68624000 -0.68624000 0.01126100 0.01126100 0.00208050 -0.00512270 -0.00512270 -0.00512270 -0.00512270 0.00000000 0.00000000 -0.00567570 -0.00567570 -0.00567570 -0.00567570 0.00402430 0.00402430 0.00402430 0.00795320 -0.00152430 -0.00152430 -0.00719580 -0.67324000 -0.02000100 -0.02000100 0.00180300 -0.02808100 -0.02808100 -0.02041200 0.00083195 -0.16536000 -0.16536000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.514 -0.673 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.010 0.000 0.000 0.000 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.686 -0.686 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.514 -0.673 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.010 0.000 0.000 0.000 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.686 -0.686 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.5306324 NA 5.3096346 10.8782570 11.5309809 8.6257658 11.3039357 8.6025474 9.6927553 NA 11.7783398 11.1241167 4.9746486 1.6851328 1.9746394 8.1769954 4.1299259 11.1898511 11.4513032 11.4962494 9.2439882 1.1001703 8.3353962 10.4899904 5.0070699 3.4694172 NA -1.4847922 10.7416295 3.5596142 5.0230113 8.5389719 6.0698053 10.7716413 11.2602614 6.9288452 8.1716422 -1.4847922 7.0543764 12.2877381 10.2320369 7.9807839 -0.4847922 -0.4847922 9.3473162 6.0850719 4.1001787 -0.4847922 3.4694172 6.1086457 2.2156475 10.5836598 NA 6.0230113 9.6217803 9.7234517 4.6237440 9.8063880 11.2659244 7.6237418 1.8371359 2.9075252 12.7149664 0.1001703 NA 1.5152078 -0.4847922 13.5174241 4.6237440 8.9612668 12.7114353 10.5870149 11.3632534 13.3351968 11.8347484 9.0850730 9.7761369 13.5377586 8.7452377 7.6976119 9.4378018 0.1001703 8.0831735 10.8722195 10.593702 12.271357 7.077460 14.020778 9.063076 4.537588 9.176105 8.040738 10.144651 7.303120 6.151843 10.758391 5.581306 1.515208 11.277807 8.426609 6.122695 8.801775 10.210881 10.844733 7.483884 9.662422 9.070765 2.215648 13.259353 10.774372 11.004564 10.284229 10.849211 9.120697 9.175213 10.572871 7.191175 1.100170 9.587089 8.008492 11.631561 2.515208 11.006319 8.501059 11.011322 10.119307 7.428106 14.411668 10.186758 10.870844 12.621453 10.015063 -1.484792 NA 9.888082 9.530632 10.090757 TCGA-A2-A0CR 54 0 NA 3283 breast stage iib t3 n0 m0 female 2004 NA no infiltrating lobular carcinoma 0 asian not hispanic or latino NA NA 3 3 4 3 3 3 4 3 6 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 2.878418e-06 5.895554e-07 3.88349514563107 73.7864077669903 2.9126213592233 11.6504854368932 7.76699029126214 9.2704014 7.8487519 10.6620739 4.2270479 9.0932971 9.0575261 9.3883605 9.2724833 11.5594582 11.0420506 11.1339392 10.0713434 0.8347112 12.2205936 0.8347112 11.1538388 6.3582925 8.5351708 8.3002976 11.4776854 2.2941649 12.8401803 7.8234156 10.5148709 9.3835531 5.2609967 -1.1652079 12.2781293 9.2054187 -0.1652079 9.7573157 5.5761986 NA 5.6420864 8.9221940 9.2651837 8.9857477 10.2162742 7.9717223 9.9665882 5.4196939 10.1009321 14.3319281 4.2977637 10.5005112 9.4595267 8.9182106 5.4929427 4.7654711 7.0921186 10.8258987 -1.1652079 10.5728235 5.4785868 6.9484735 4.3582908 9.2195149 11.7171832 10.8048371 11.9345721 11.6309736 8.3969738 10.1928329 10.3048816 9.9851131 10.0927083 1.1566555 11.2557441 10.6695972 1.1566555 10.4003093 8.1453437 3.2160202 5.0245546 10.9549691 8.9627254 9.7860159 8.4604399 7.0490502 9.9115467 12.7978982 12.6675223 9.9863821 9.9517249 0.00471900 0.00471900 0.00180300 0.00263570 -0.00553750 -0.00539920 0.00152550 -0.18257000 0.00000000 0.00000000 0.00000000 -0.00041585 -0.00041585 0.00305220 0.00305220 0.00305220 -0.00705760 -0.00705760 -0.08413000 0.00034405 0.00736090 -0.21082000 -0.21082000 -0.21082000 0.01334000 0.01334000 0.01334000 0.00833510 0.00471900 0.00471900 0.00025098 0.00180300 0.00346870 -0.00553750 -0.00180140 -0.00381520 0.00152550 -0.18257000 -0.18257000 -0.00069303 -0.00249380 0.00000000 0.00597000 0.00597000 0.00597000 0.00597000 -0.00041585 -0.00041585 0.00305220 0.00305220 -0.10196000 -0.00152430 -0.00705760 -0.00705760 -0.00705760 -0.05644200 0.00034405 0.00034405 0.00736090 -0.15144000 -0.21082000 -0.21082000 0.00875280 0.03594700 0.01334000 0.00833510 0.00332990 -0.21886000 -0.21886000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.151 -0.151 -0.211 -0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.183 -0.183 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.151 -0.151 -0.211 -0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.183 -0.183 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0441845 2.6420777 6.0731368 11.6529139 11.4659083 8.5875803 11.1481811 5.0941938 10.3912564 4.7654711 12.8009663 11.9427149 3.1566555 NA 1.1566555 7.2356103 4.3265877 12.5852288 10.8389517 9.2162742 9.1966749 5.2270479 7.9301282 11.1589118 9.8715916 8.0897598 0.8347112 -0.1652079 10.2249002 6.8515392 7.2735233 7.7565723 8.0490502 11.6893113 9.6934892 3.2941649 10.1385119 NA 7.1108560 13.0450981 8.8927228 9.6668301 NA -1.1652079 8.1339390 NA 5.4494425 5.5761986 8.7506105 4.6676197 5.6029141 11.2103137 2.1566555 8.8162986 10.9594987 9.7173743 8.1521439 11.0888740 12.8178139 9.9964930 5.2776761 7.3345772 10.4499010 -1.1652079 1.1566555 NA 3.0826515 12.524963 5.548976 8.322571 12.220594 10.446678 10.167887 11.477685 11.331585 9.068674 9.887978 12.956346 10.640878 7.092119 8.492943 1.834711 6.492943 9.355350 10.696594 12.558392 4.326588 13.250866 9.024531 9.129352 8.903510 6.895427 9.302785 10.008408 9.371950 11.133939 8.366113 3.741618 9.500067 8.524729 7.817810 8.926167 11.347472 9.805556 7.654910 10.523856 3.589620 9.075522 11.509808 8.985748 11.286457 10.073136 9.171238 10.249416 9.879808 10.247830 5.024555 6.192283 10.369929 7.024556 10.825899 9.902838 10.572823 4.964015 11.242265 9.219515 7.244122 15.008155 10.477685 10.073136 12.072240 11.336071 9.573668 3.922198 9.204329 8.705096 8.831911 TCGA-A2-A0CS 73 1 2348 NA breast stage iv t4b n3a m1 female 2004 NA yes infiltrating ductal carcinoma 12 white not hispanic or latino 1 1 2 NA 2 2 4 1 5 5 4 3 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.427581e-07 25.9259259259259 11.1111111111111 0 37.037037037037 25.9259259259259 10.1238993 9.1857969 10.9902094 7.6156201 8.7821464 9.3701301 9.6795288 9.5899333 10.9166910 13.6939685 10.5540717 10.4570011 5.3600341 13.1181452 2.4692608 9.9490436 7.7203510 7.4579480 10.9483699 13.4188469 -1.1155974 14.5548741 3.6391858 10.7460856 10.5113787 5.5707999 -1.1155974 12.4446397 11.2429520 0.4692608 7.9875886 6.5847401 NA 3.2766158 9.4215193 10.0416478 10.5659785 11.6562029 9.1971838 10.4522569 6.7791192 11.2555330 14.3176255 7.2962775 8.6754638 11.4783921 11.0058343 3.5847461 5.1880804 8.2374476 11.5166145 NA 9.8906270 4.1322313 5.0937545 4.2062290 10.0410160 11.4173872 10.4565273 11.9035441 12.1829363 8.6672989 11.0713436 10.4393692 10.4384100 9.9677802 3.8843049 12.0174431 10.5747354 3.8384980 10.5380416 8.5899331 3.3437347 4.3105655 11.4448725 9.6557903 9.8165156 9.2051014 1.8842853 9.7258652 14.2101684 11.1569306 10.1783471 9.3701301 0.4478200 0.4621200 0.1386500 0.1386500 -0.6457400 0.0294820 -0.3178600 -0.3178600 0.0314360 0.0314360 0.0251100 -0.2180000 -0.2180500 0.0000000 0.0000000 0.0000000 0.1266800 0.1266800 -0.3090900 0.0239870 -0.3337600 -0.0314960 -0.0314960 -0.0314960 -0.0544200 -0.0544200 -0.0544200 0.3058500 -0.5575300 -0.5450200 -0.3027500 0.1386500 -0.6746500 -0.6457400 0.0294820 0.0416000 -0.3178600 -0.3178600 -0.3178600 0.0279190 0.0279190 0.0314360 0.1146200 0.1146200 0.1146200 0.0574490 -0.2180500 -0.2180500 0.0000000 0.0000000 0.0000000 0.0000000 0.1266800 0.1078900 0.1078900 -0.3090900 0.0239870 0.0056084 -0.3337600 -0.6978000 -0.0314960 -0.0314960 0.0327040 -0.0544200 -0.0544200 0.3058500 0.0394780 -0.3679300 -0.3679300 -0.218 -0.218 0.000 0.000 0.127 0.127 -0.309 0.000 -0.334 0.298 -0.366 0.000 0.000 0.000 0.000 0.000 0.000 -0.097 0.448 0.306 0.306 0.000 -0.368 -0.303 -0.303 0.139 0.139 -0.646 -0.646 0.000 0.000 -0.318 -0.318 0.000 0.000 0.000 0.000 0.115 0.115 -0.135 -0.135 -0.218 -0.218 0.000 0.000 0.127 0.127 -0.309 0.000 -0.334 0.298 -0.366 0.000 0.000 0.000 0.000 0.000 0.000 -0.097 0.448 0.306 0.306 0.000 -0.368 -0.303 -0.303 0.139 0.139 -0.646 -0.646 0.000 0.000 -0.318 -0.318 0.000 0.000 0.000 0.000 0.115 0.115 -0.135 -0.135 8.6391884 NA 6.9177241 10.2920997 11.8565627 6.6594836 10.9931520 7.3296878 9.8232703 NA 11.4605490 11.7175329 3.4078694 6.0135829 0.8843244 8.2352402 3.6391858 11.1016528 11.6364724 10.5646603 9.9684449 2.4692608 7.3841465 10.4451113 5.3600341 2.3437205 2.8843049 -0.1157538 10.8439406 4.8384980 5.8729863 8.1203151 4.5847401 10.1070957 10.3666046 3.0542233 8.5245456 NA 8.1534274 12.1326732 6.9928251 6.8843012 NA -1.1155974 8.4860715 2.2062369 2.3437205 NA 2.4692608 5.0350652 1.4692608 10.6316546 0.4692608 5.4692641 9.9823329 10.0998338 4.7171884 9.8128192 12.1650716 7.9503903 1.2062056 4.0542233 11.2862470 -0.1157538 NA 1.2062056 1.6916682 12.791943 4.791189 7.920474 13.118145 9.910133 11.328280 13.418847 11.724095 9.248435 10.554072 13.093526 8.372141 8.237448 9.749261 NA 7.347825 11.241028 10.921161 11.946684 6.484214 13.287377 8.506353 4.639186 9.347825 8.312661 10.955830 5.570800 8.139329 10.554072 6.506353 NA 9.664020 5.113121 4.982332 10.087037 10.471610 10.913933 8.946347 8.529959 11.494634 4.407863 9.618257 10.565978 10.984635 10.488854 10.427333 9.123899 9.749261 10.726258 8.556726 NA 9.616790 6.392096 11.516614 2.054223 9.890627 5.513658 10.600130 10.041016 6.044171 13.078981 9.964452 10.475356 13.071885 10.376655 NA NA 9.499011 9.547859 8.754665 TCGA-A2-A0CT 71 0 NA 2289 breast stage iia t2 n0 (i-) m0 female 2005 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 2 2 2 1 4 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.699307e-06 6.935946e-07 27.536231884058 42.0289855072464 5.79710144927536 14.4927536231884 10.1449275362319 9.8819734 10.1064644 11.1192643 9.1585802 9.5770436 8.0432789 8.9487971 8.8940674 9.5124466 14.4148708 11.9278969 10.2371380 2.3267387 13.8380860 4.7641497 8.0225531 8.1680473 8.5683312 9.4798748 12.9987284 -0.2582526 14.1982333 2.7417905 9.0547223 11.1141036 10.1442618 NA 9.2424951 9.0905108 2.5491270 10.2648545 7.0816326 3.4422269 3.6959827 9.2934910 10.4146499 9.4916521 9.7950297 9.4008865 10.2707250 NA 9.5958717 14.1000904 5.3055511 11.1519689 10.7696886 11.6383042 3.9897112 6.6959785 9.1211610 9.2124414 -1.2580801 10.6228966 10.0871878 4.3267459 4.4697037 10.3201553 11.7703794 9.8800544 10.0943778 12.5253948 8.5491374 11.1012577 10.7757493 11.0294950 10.2235821 4.6486725 11.4876670 12.0114937 -0.2582526 9.7254888 9.9359239 1.7417905 4.5231416 9.7800157 9.0849683 10.0190700 11.1143756 2.4422269 8.7710698 11.1598988 9.9693986 9.1764108 8.8305710 0.6665200 0.7162200 0.3536500 -0.2617900 0.4643400 0.0389130 0.8297500 -0.8544800 1.6892000 1.6892000 1.6892000 -0.3861500 -0.3787600 0.8026700 2.2032000 -0.8541600 0.0203430 0.0203430 -0.8571000 0.0492560 -0.8560700 -0.8679800 0.7923900 0.7923900 0.1870700 0.1870700 0.2165300 2.1121000 -0.4121200 -0.3949700 -0.3788700 -0.8628000 0.4643400 0.4643400 0.0389130 0.0389130 -0.8730700 -0.8544800 -0.8633400 -0.9365100 -0.8968000 1.6892000 -0.4098100 -0.4098100 -0.4098100 -0.4098100 -0.3787600 -0.3787600 0.7837000 0.7145300 -0.8541600 -0.8555900 0.0203430 0.0203430 0.0203430 -0.8519400 0.0492560 0.0492560 -0.8560700 -0.8750600 -0.8760300 0.7923900 0.0583670 0.1300600 0.1870700 0.8213800 0.0080567 0.0000000 0.0000000 -0.386 -0.386 0.784 -0.070 0.000 0.000 -0.852 0.000 -0.856 -0.480 -0.859 -0.868 -0.117 0.000 0.000 0.187 0.187 0.272 0.667 0.821 0.821 0.000 0.000 -0.379 -0.379 -0.262 -0.262 0.464 0.464 0.000 0.000 -0.854 -0.854 -0.092 -0.897 1.689 1.689 -0.410 -0.410 -0.126 -0.126 -0.386 -0.386 0.784 -0.070 0.000 0.000 -0.852 0.000 -0.856 -0.480 -0.859 -0.868 -0.117 0.000 0.000 0.187 0.187 0.272 0.667 0.821 0.821 0.000 0.000 -0.379 -0.379 -0.262 -0.262 0.464 0.464 0.000 0.000 -0.854 -0.854 -0.092 -0.897 1.689 1.689 -0.410 -0.410 -0.126 -0.126 8.2673036 NA 4.4142100 9.5459136 11.3300288 7.0408530 10.3820276 8.0729681 8.8424449 1.0637100 11.5641543 13.0532663 2.4422269 4.5746707 1.3267674 7.7779562 3.4966669 8.5000057 11.8187652 10.8045033 9.3192115 -0.2582526 7.3040254 9.7382561 6.1426626 10.1842078 3.2653469 NA 10.0743787 9.5016708 5.9512357 7.0591952 5.6486725 8.6842679 9.5215019 4.9117060 8.2495771 NA 5.9801876 12.4833549 6.4832499 8.1447949 NA 6.3192115 9.1490505 5.9414538 4.3564889 NA 2.2012261 4.5535080 0.7417474 10.5020867 NA 7.5904059 10.5260084 10.3092634 3.2653469 9.1960820 11.6597141 8.9079458 1.5491270 3.2653469 11.4962526 2.9117108 NA 2.8292407 0.7417474 14.508260 6.125488 9.097134 13.838086 8.837180 10.258960 12.998728 9.843758 8.195362 10.695979 12.743191 12.189512 9.121161 8.495000 2.549127 7.736136 11.563756 10.344018 11.580986 7.545914 15.035146 8.654672 4.549139 8.807872 9.604420 10.013462 5.116822 6.701785 11.927897 6.980188 2.989702 10.277058 4.624428 6.987336 12.646982 8.103726 10.816927 8.784810 9.774517 12.601026 2.911711 11.201330 9.491652 10.682096 10.474798 10.643781 8.127645 11.245608 10.337506 8.795709 -1.258080 7.537595 6.549138 9.212441 4.265347 10.622897 5.428283 9.607516 10.320155 7.418022 13.572347 9.862020 10.334707 11.966086 9.924177 NA 2.442227 10.614458 10.803154 9.045563 TCGA-A2-A0CU 73 1 158 NA breast stage iia t2 n0 (i+) m0 female 2005 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 NA 2 2 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5.548757e-07 2.080784e-07 22.7272727272727 9.09090909090909 4.54545454545455 45.4545454545455 18.1818181818182 9.2127546 9.8876899 10.3612723 9.4422912 8.0288365 8.0806257 10.4828892 10.1394380 9.8553479 15.6149520 11.7569161 10.2201627 -0.3889221 13.6812307 3.0032964 9.4094556 7.6388898 8.6540112 9.0559987 12.5637252 0.1959775 13.9674359 2.4183519 8.8683719 11.3824734 7.4086456 NA 8.4705186 10.0585838 1.6109835 8.3079517 7.8253029 -1.3891110 4.3658745 10.1172915 10.7067106 6.8541578 11.1110789 9.5133591 11.1720332 4.0372504 10.6229100 14.4296410 7.9854583 10.8458014 10.7921362 12.0348877 6.1266838 6.5298475 8.9295268 11.1421217 NA 10.2842931 9.1404144 3.4183384 4.2256914 10.5031473 11.6335252 10.0922788 12.8008857 12.4766206 8.7632688 10.8562395 10.3248000 11.1486877 11.1686870 5.4311616 11.9740236 12.7071226 -1.3891110 10.6222112 9.5476218 3.1389291 3.9329116 9.8398026 9.7136157 10.7594606 10.9652333 4.1345495 7.2256933 12.6837865 10.2081053 11.0014216 9.4875008 0.11477000 0.24249000 0.00666530 -0.06913500 0.42469000 0.00000000 -0.46119000 -0.45500000 2.08600000 0.84793000 1.09900000 -0.44285000 -0.43518000 -0.04197400 -0.04197400 -0.04197400 0.46195000 0.00015865 -0.24385000 -0.43908000 0.01335300 -0.63803000 0.65590000 0.25246000 0.01112100 0.01112100 0.01112100 0.44833000 0.02665400 0.11477000 -0.33084000 0.00666530 0.47152000 0.42284000 0.00000000 0.00000000 -0.46119000 -0.45500000 -0.45442000 0.00097064 -0.00143970 -0.45663000 -0.43789000 -0.00138580 0.01740400 -0.45608000 -0.43518000 -0.44523000 -0.04197400 -0.04197400 0.01739700 0.01739700 0.43564000 0.00015865 0.00015865 -0.23948000 -0.43908000 -0.43908000 0.01335300 -0.45254000 -1.26970000 0.65590000 -0.43637000 0.01112100 0.01112100 0.44833000 0.45241000 -0.44210000 -0.44210000 -0.435 -0.435 0.000 0.000 0.435 0.000 -0.239 -0.439 0.000 0.000 0.000 -0.350 0.252 -0.432 -0.432 0.000 0.000 0.000 0.000 0.448 0.448 0.452 -0.442 0.000 0.000 0.000 0.000 0.425 0.425 0.000 0.000 -0.455 -0.455 0.000 0.000 -0.457 -0.457 0.000 0.000 0.000 0.000 -0.435 -0.435 0.000 0.000 0.435 0.000 -0.239 -0.439 0.000 0.000 0.000 -0.350 0.252 -0.432 -0.432 0.000 0.000 0.000 0.000 0.448 0.448 0.452 -0.442 0.000 0.000 0.000 0.000 0.425 0.425 0.000 0.000 -0.455 -0.455 0.000 0.000 -0.457 -0.457 0.000 0.000 0.000 0.000 8.0785896 NA 7.4720710 9.9773061 11.7012618 6.7222242 10.3537144 9.0988540 8.5333749 2.9329116 11.1499003 12.1610489 4.9860240 4.6553805 3.1959460 7.4247651 2.9329116 8.9751186 11.8648314 10.3646186 9.4422912 0.1959775 8.5103409 10.0760401 6.1959460 7.0075891 4.1345495 NA 10.1108299 8.3708722 5.6770741 8.0539275 9.1511120 11.7253103 10.1851044 4.4183384 8.3574983 -0.3889221 7.9838492 11.9888723 8.8859443 7.7479748 NA 7.2403401 8.3907034 2.4183519 3.9329116 -1.3891110 4.4183384 7.2300666 2.6109835 10.5103409 NA 8.2620356 9.8446036 9.8198280 4.5882649 9.0877301 10.4596069 7.8636492 2.6984408 2.9329116 11.0147948 1.4183519 0.6109835 4.0704151 2.6984408 15.1115680 6.7142716 9.0435258 13.6812307 9.5939776 10.1996986 12.5637252 13.6739576 8.9809193 10.8475961 12.4496955 10.2842931 8.9295268 8.9351645 0.1959775 7.2869412 12.8418300 10.6253531 11.6350847 6.1192545 13.3720650 8.6305747 4.5651828 9.1187786 9.5201270 9.5614743 5.5996689 8.6081635 11.7569161 5.8777712 3.1345495 9.7024193 11.0862107 7.9394123 9.7292763 10.1311115 10.0314706 8.9773063 9.5035268 12.1265606 4.3114232 12.4481398 6.8541578 10.2926616 9.4805778 11.7302493 9.5666339 10.4855811 10.4143079 9.7721158 0.9328927 9.0082415 6.7392365 11.1421217 4.7607319 10.2842931 5.2403410 9.9090466 10.5031473 7.2330358 13.3207678 10.5220014 9.1827365 12.4957268 9.6898018 1.6109835 4.5417193 10.5320810 9.6298795 9.2366928 TCGA-A2-A0CV 41 0 NA 3011 breast stage iib t2 n1a m0 female 2005 NA yes infiltrating ductal carcinoma 4 asian not hispanic or latino 2 2 2 NA 2 2 3 4 4 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.040392e-07 40 5 0 35 20 10.2100677 9.2533828 11.3483959 8.3528283 8.7242222 8.8522757 10.1330149 9.8718199 10.8066163 12.8608590 11.1889753 10.6002897 5.4159141 12.3764209 3.6885944 10.5393754 7.2411394 8.3452216 11.3588216 12.2709702 1.8972017 13.7179774 7.3840973 9.7071729 10.8585231 8.3791392 0.7817374 9.6729293 10.1520317 -1.8033930 8.8261016 7.6561767 -0.8031412 4.2628315 9.9768747 9.7656513 9.4517737 10.9325126 9.7222659 11.2931308 1.0041058 11.5870484 14.4987235 7.0602809 9.5933498 10.6500157 10.4725785 5.6643520 2.1036319 8.9748221 11.5571807 NA 11.2301681 4.4635309 6.3616526 5.1854305 9.6955942 11.6458937 10.5706977 12.9254096 12.3263501 8.2232686 11.0308210 10.5993228 10.5540221 10.8529464 4.0793866 12.0220020 10.5287816 -1.8033930 10.7845225 9.0032947 4.4061965 5.4351485 10.6321549 9.6381330 9.8522757 9.1385263 3.3260339 7.9246653 13.1926447 13.0977533 9.9785146 9.9495438 0.67474000 0.70532000 0.36084000 0.37336000 -0.33491000 -0.00013862 -0.37865000 -0.35270000 0.36510000 0.36510000 0.36510000 -0.00443120 -0.00443120 0.00041593 0.00041593 0.00041593 0.00920700 0.00920700 -0.30451000 0.00597000 0.33157000 -0.37741000 -0.37741000 -0.37741000 -0.00553750 -0.02794500 -0.02794500 0.31900000 -0.01003700 0.00569190 -0.33029000 0.36084000 -0.36409000 -0.33491000 0.01600600 0.01600600 -0.37865000 -0.35270000 -0.35270000 0.35630000 0.36559000 0.36510000 0.34486000 0.34486000 0.34486000 0.34486000 -0.00443120 -0.00443120 -0.00823120 0.00041593 0.00041593 0.00041593 0.00920700 0.01251600 -0.01392800 -0.30451000 0.00402430 0.00402430 0.34128000 -0.38795000 -0.37741000 -0.37741000 -0.00041585 -0.00553750 -0.02794500 0.31900000 0.01223700 -0.38973000 -0.38973000 0.000 0.000 0.000 0.000 0.000 0.000 -0.305 0.000 0.341 -0.071 -0.388 -0.377 -0.377 0.000 0.000 0.000 0.000 0.000 0.705 0.319 0.319 0.000 -0.390 -0.330 -0.330 0.361 0.361 -0.335 -0.335 0.000 0.000 -0.353 -0.353 0.366 0.366 0.365 0.365 0.345 0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.305 0.000 0.341 -0.071 -0.388 -0.377 -0.377 0.000 0.000 0.000 0.000 0.000 0.705 0.319 0.319 0.000 -0.390 -0.330 -0.330 0.361 0.361 -0.335 -0.335 0.000 0.000 -0.353 -0.353 0.366 0.366 0.365 0.365 0.345 0.345 0.000 0.000 8.6633315 0.5186358 5.3156858 10.4623601 11.0439982 7.5519643 11.2858644 9.1905467 8.6877162 3.2842032 13.7389608 11.2281326 2.0041058 -1.8033930 2.9516251 7.4821473 4.2411385 10.5578664 11.2700498 10.9312430 9.9066904 7.9616164 7.6845852 10.4882036 7.4517732 3.9516344 -0.8031412 NA 11.7570779 5.9516321 7.3540924 7.7339637 7.3865696 10.6887534 10.3186023 5.1740268 8.2506708 1.5186862 8.9935960 13.0027911 7.2329188 7.6209111 NA 1.1967329 8.3778972 2.0041058 4.7203058 -0.2182626 6.1333827 3.1084408 3.4061965 10.2675369 0.5186358 9.4327592 10.0406662 10.1491223 5.5096293 9.3234496 11.7272733 9.3840971 1.6561760 4.2628315 12.2535521 1.3666439 -1.8033930 1.5186862 2.1967329 11.9446999 3.4821513 8.2397723 12.3764209 10.0979890 10.8689494 12.2709702 12.3589790 8.8923561 10.6543825 14.1635434 11.0101255 8.9748221 9.1319102 -0.8031412 7.2246510 12.0091229 11.3740089 12.1025081 6.7551653 13.9828324 9.4000930 6.0976129 8.9558010 6.5231746 10.3436382 6.9382117 7.1304357 11.1889753 7.5254198 4.8549581 10.6587360 9.3311713 6.2610023 11.4985270 10.6443449 11.1101955 8.8530001 8.5399308 10.8126045 5.7281273 10.7559955 9.4517737 10.6502729 9.7863962 10.7845225 10.0272602 10.3997871 10.7812378 8.4458587 -0.2182626 9.4660881 8.4134426 11.5571807 7.1825870 11.2301681 6.5141570 11.0790825 9.6955942 6.8226001 14.7164120 10.3588216 10.5512699 12.7821184 10.2861956 2.7817164 1.0041058 9.7694453 10.0674950 9.4780955 TCGA-A2-A0CW 67 0 NA 3283 breast stage iib t2 n1a m0 female 2006 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 3 2 4 NA 2 2 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.491228e-06 2.427581e-07 26 34 6 18 16 9.5880602 9.1207283 11.0747564 8.9791971 8.5912890 9.7241919 10.1113879 10.3200611 9.0814688 15.5505395 10.1982994 11.1809024 1.7860945 13.0433230 0.2011320 8.1406994 7.5431950 8.0324271 11.8185874 13.1221241 1.2011320 13.0838586 7.1926420 9.4017429 10.9995918 6.6969745 -1.7988680 11.6891660 9.8606700 -0.2139055 9.1876732 6.7049453 NA 3.0084690 9.8726610 9.3457782 9.5026162 10.9591350 9.8876205 11.1591289 9.5020445 11.5951807 14.1085975 8.1601513 9.5570215 10.8675659 10.6902153 1.6605636 6.8664555 9.0583235 10.1285276 3.1553121 10.6401717 4.7860840 5.4007907 5.5761593 9.4032439 11.5931691 10.4160462 11.4577710 13.3240289 8.1494870 10.7412480 9.7388237 11.4740413 10.4245184 3.1080058 11.2446600 9.8637884 -1.7988680 10.1091372 9.2819374 3.8173060 4.4679055 8.0868161 10.3606760 10.5578471 9.3915620 0.7860945 8.5060417 11.4552628 11.2822705 9.7509046 9.3050633 -0.04061600 0.35055000 2.49370000 0.01084200 -0.34687000 0.00791750 0.00000000 0.00000000 0.07930300 0.07930300 0.99011000 -0.32077000 0.04599100 0.00402430 0.19497000 0.19497000 0.00069327 -0.00026469 -0.35202000 1.74040000 -0.32240000 -0.66049000 -0.30850000 0.02370600 -0.61844000 1.82880000 -0.03340500 3.65690000 -0.66022000 -0.69151000 -0.69396000 -0.68797000 -0.34687000 -0.35282000 0.00791750 0.00791750 0.00000000 0.00000000 -0.01188700 -0.68305000 0.25074000 -0.71720000 0.00847430 0.00847430 0.00847430 0.00847430 0.04599100 -0.66836000 0.00402430 0.19497000 -0.34159000 -0.34159000 -0.67949000 -0.00026469 -0.00026469 -0.66883000 -0.67830000 -0.68161000 -0.32240000 0.04060900 -0.66049000 -0.64996000 -0.33641000 -0.61844000 -0.62950000 0.03976100 -0.70001000 -0.66114000 -0.65316000 -0.328 -0.328 0.000 0.000 0.000 0.000 -0.659 -0.674 -0.322 0.000 0.000 -0.660 0.000 -0.322 -0.322 -0.618 0.000 -0.349 -0.022 0.000 0.000 -0.741 -0.661 0.000 0.000 -0.676 -0.676 -0.360 -0.360 0.000 0.000 0.000 0.000 0.251 0.251 -0.717 0.000 0.000 0.000 -0.117 -0.117 -0.328 -0.328 0.000 0.000 0.000 0.000 -0.659 -0.674 -0.322 0.000 0.000 -0.660 0.000 -0.322 -0.322 -0.618 0.000 -0.349 -0.022 0.000 0.000 -0.741 -0.661 0.000 0.000 -0.676 -0.676 -0.360 -0.360 0.000 0.000 0.000 0.000 0.251 0.251 -0.717 0.000 0.000 0.000 -0.117 -0.117 8.8158300 NA 6.4585083 11.5454159 12.1725737 6.9246439 10.9160095 8.2303380 9.6425444 NA 10.8288818 13.0483413 7.1783999 NA 2.0084869 8.1274161 2.6605408 11.7464465 11.6160694 10.8017299 9.4997554 3.4865213 7.2123475 9.7509046 6.7402786 2.3710570 2.5934255 NA 11.1687065 5.5848242 7.6929732 8.7168198 10.0883407 10.8460082 10.0391421 2.6605408 8.3419497 -1.7988680 6.7747673 11.2909015 8.1303785 7.2067448 NA 7.8028905 7.8998246 5.8735450 3.6929739 NA 5.0466089 3.0136230 2.4490595 11.2065691 0.5230601 9.3964922 10.7290856 10.3326555 4.5409696 10.0587122 13.7836148 8.1288981 4.3508649 3.1553121 12.7457223 2.1080226 NA 2.1080226 2.8449681 11.893309 9.433541 8.216535 13.043323 10.173741 11.112886 13.122124 11.637701 9.303096 10.879280 11.934135 9.474916 9.058324 10.142901 4.830478 8.131857 13.845314 11.074372 12.014200 7.125932 12.752587 8.549848 5.256403 9.615277 8.954337 10.871528 6.293876 10.747291 10.198299 6.385995 NA 9.795445 5.034009 9.869819 8.825915 11.010888 10.229717 8.037170 9.739794 10.382583 5.059100 10.949055 9.502616 9.548188 10.556196 11.603866 9.551507 10.205340 11.283602 9.237294 5.390946 9.828148 5.495740 10.128528 4.108014 10.640172 4.755710 10.712873 9.403244 7.694976 13.003485 10.136285 10.091764 11.544167 10.722966 3.410572 4.807267 10.648978 9.918368 9.485366 TCGA-A2-A0CX 52 0 NA 1728 breast stage iia t2 n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 4 NA 6 1 2 2 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.959201e-06 1.560588e-06 11.6402116402116 71.9576719576719 2.11640211640212 11.6402116402116 2.64550264550265 9.5159280 9.4205902 11.2992242 9.0341552 8.7243924 9.5766657 9.3844563 9.8157370 11.6150396 14.2177437 9.4983243 10.4636963 -1.3090019 16.6767001 2.3914103 9.0811383 5.1828234 8.4902508 7.8906419 12.6721799 NA 12.2468766 -0.3090019 9.2513023 10.4047854 7.2066696 0.6909981 12.9437087 11.5580550 2.6909757 8.8073134 7.0263597 -1.3090019 4.8608933 9.8992037 10.0529132 9.3121056 10.2796840 9.7374113 10.7820742 3.3348257 10.8508407 15.1454775 7.4944548 9.8521012 10.7893305 12.2284305 7.4324367 4.3633954 8.8608942 10.2056834 0.6909981 10.8397637 7.6711086 6.1172337 5.1828234 10.0207657 11.6782334 9.6560320 11.2240557 12.4588435 8.5427185 10.8838786 10.0149023 10.6440746 10.6990478 4.9763728 11.8459456 9.2899522 NA 10.3157648 9.7223260 2.6007455 5.6682496 10.8137974 9.7909746 10.0567450 10.0881091 4.9197882 7.9197882 13.0265691 12.7267994 10.0179606 9.4566698 1.3708000 1.3708000 1.4534000 0.3795700 -0.0077482 1.4514000 3.6084000 0.0133530 -0.0052610 0.8870000 1.6736000 -0.0080244 0.0048430 -0.2306700 -0.2306700 -0.2306700 0.3580600 0.3541500 -0.1827000 -0.0231550 -0.3621500 -0.4551100 3.6569000 1.6969000 -0.0047079 -0.0047079 -0.0047079 0.3181900 -0.3556700 -0.3812300 0.0416000 -0.3729000 0.0000000 -0.0078258 -0.3765100 -0.3765100 -0.0239790 0.7470800 -0.7596000 0.0225850 0.0225850 -0.0052610 -0.0016629 -0.0016629 -0.0016629 -0.0016629 0.0048430 0.0048430 -0.2306700 -0.2306700 -0.2306700 -0.2306700 0.3580600 0.3541500 0.3541500 -0.1827000 -0.0231550 -0.0231550 -0.3747100 -0.3624900 -0.3648800 -0.3442300 -0.0299940 -0.0047079 -0.0047079 0.3181900 -0.0469890 0.3673900 0.3673900 0.000 0.000 -0.231 -0.231 0.358 0.358 -0.183 0.000 -0.362 1.009 1.009 0.361 0.361 0.000 0.000 0.000 0.000 1.371 1.371 0.318 0.318 0.000 0.367 0.318 0.318 -0.373 -0.373 0.000 0.000 1.377 1.000 0.000 0.000 0.000 0.000 0.366 0.887 0.000 0.000 0.107 0.107 0.000 0.000 -0.231 -0.231 0.358 0.358 -0.183 0.000 -0.362 1.009 1.009 0.361 0.361 0.000 0.000 0.000 0.000 1.371 1.371 0.318 0.318 0.000 0.367 0.318 0.318 -0.373 -0.373 0.000 0.000 1.377 1.000 0.000 0.000 0.000 0.000 0.366 0.887 0.000 0.000 0.107 0.107 7.7994940 6.5613338 6.1339128 10.1952919 12.2582125 6.1486779 11.4071458 8.8490488 8.6128103 NA 12.6628721 11.9269507 2.5978648 5.8708776 1.4983019 8.2683984 4.9197882 11.8076382 11.4366437 11.2429179 9.8552479 -1.3090019 8.6881489 9.8330764 6.7298885 3.4458591 3.1503972 NA 10.8047115 3.5978648 7.3093545 8.5751399 7.6157819 10.8324507 10.1888212 2.2759308 8.1088219 -0.3090019 6.9670937 12.6248444 6.8906412 9.6202277 NA 8.9878856 8.6596363 5.4723285 4.1503972 6.7408183 5.0128994 5.4347283 2.1503972 11.9167793 1.2759606 7.5047507 10.2880908 10.0457698 4.7133384 10.0100770 13.1766729 8.5766657 3.1503972 2.9388880 10.6124384 2.6909757 NA 0.2759606 1.8608834 11.1900055 7.7021969 8.1585749 16.6767001 9.9845905 11.2120790 12.6721799 8.8646464 8.7916318 10.5139385 13.2265485 11.6079684 8.8608942 11.0509934 -0.3090019 9.0627461 11.7295455 11.435173 12.361183 7.778432 13.424301 8.354528 5.880793 9.520692 8.316678 10.957861 6.548950 5.214533 9.498324 6.696593 6.905288 9.966512 9.849579 7.341698 10.863709 10.543499 10.953651 8.133913 9.111982 9.439162 4.757061 9.883916 9.312106 10.464521 10.073593 9.720257 9.457498 8.728516 10.704990 8.757059 3.820250 8.737971 6.820253 10.205683 5.985589 10.839764 8.418890 10.630916 10.020766 7.342021 13.311647 9.793601 10.331214 12.058930 10.711949 NA NA 9.850841 10.062201 9.126640 TCGA-A2-A0CY 63 0 NA 1673 breast stage iib t2 n1 m0 female 2006 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 3 2 NA NA 1 2 5 2 2 9 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1273206 8.3861259 11.8045510 6.9470653 9.0592257 8.0641979 9.6524653 10.7559573 12.2423714 13.6967594 10.6380881 11.1336414 NA 12.1965029 2.6179332 9.1415036 6.7389569 10.2882437 6.7138662 13.1626162 1.2960168 11.7603039 6.3621034 10.0239338 10.6151210 6.5151826 -0.7039244 6.1161921 12.8648008 7.4558845 7.5391875 6.6447417 NA 4.3404056 8.9488584 10.5598694 8.7513405 7.9929808 9.8380780 10.2443806 1.2960168 10.4802689 14.3874901 8.4224597 9.9380651 10.4207809 11.6880624 3.6179449 2.8809793 8.7656551 9.9955858 0.2959581 11.3914104 2.9964611 3.6179449 2.2960168 10.0475575 12.3016379 9.2297040 12.4525705 12.7728862 8.7180780 11.2729354 10.5157869 10.0525697 10.6408641 3.6179449 12.4251354 9.3431373 5.3834762 10.3533283 8.9999169 3.4715387 2.9964611 11.4684409 10.7863629 10.2567394 9.6224428 3.8809793 9.8342024 13.5570799 10.5575207 10.3641199 12.2366940 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.7513405 NA 3.5439412 11.2704280 12.0788069 6.6545329 10.9362583 6.6800627 8.2628649 NA 13.0182873 12.5937995 9.6088963 NA 3.2960168 9.4201348 7.6088965 8.7636191 11.5317285 12.0513183 9.9622374 0.8809597 7.8467603 9.7327249 4.9107231 8.3781626 3.2029035 3.9964520 9.7737717 3.8809793 5.6179420 7.4508318 10.1422873 9.7666316 10.8758007 0.2959581 8.6535652 6.7138662 6.5906335 13.6906101 8.0442061 8.4907703 0.2959581 6.8809757 8.2089025 5.7878660 3.6179449 0.8809597 -0.7039244 1.6179567 0.2959581 12.8002117 5.6883314 10.3794927 11.1889356 11.2589094 9.0790116 8.9754935 10.6386437 9.5176005 4.9964520 2.9964611 10.6213188 2.4659484 NA 3.1033634 4.7554431 12.840869 7.470939 8.907038 12.196503 10.246569 10.834687 13.162616 12.026908 9.332187 9.941672 13.833778 12.476700 8.765655 9.743097 7.539188 7.345862 12.772380 10.397333 11.549565 6.505467 12.543787 9.316993 5.996452 9.991242 7.037480 9.672410 5.273292 6.141504 10.638088 5.077371 NA 9.651364 10.883791 9.353937 10.060056 9.840012 9.283277 7.166378 9.153994 5.755446 3.296017 11.973378 8.751341 9.822513 10.897784 10.870134 9.509118 7.356709 10.282567 7.771747 7.622443 9.430838 7.017112 9.995586 4.050902 11.391410 6.553402 10.591782 10.047557 7.662336 15.454663 10.011975 9.885664 11.886133 11.499973 NA 5.023934 9.460920 8.407149 9.460920 TCGA-A2-A0CZ 46 0 NA 1616 breast stage iia t2 n0 (i-) m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 NA NA 5 3 3 3 4 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 2.427581e-07 6.935946e-08 22.2222222222222 0 11.1111111111111 22.2222222222222 44.4444444444444 10.0818955 9.3982347 11.4825199 9.0368278 8.4033163 8.7043979 10.0150831 9.7513847 10.9811595 12.4507203 10.6090908 10.3684026 1.5145515 12.7036770 3.6300559 10.4726425 6.2333915 8.5534922 10.3772105 12.0780872 -0.6590390 13.7815061 6.0588944 10.4327606 10.0137546 7.5662352 -1.0703605 11.8634857 8.9903065 4.7369674 9.0498485 7.6161114 2.5145768 5.4053457 9.3133150 9.5770691 9.5461594 10.5364785 9.1975679 10.7660556 11.7597297 9.4994662 15.3915377 7.1486820 12.0757020 10.9253778 10.8447431 5.2515373 7.3766941 8.7922479 11.4920916 NA 11.1234440 7.6438562 6.8365011 5.5734654 10.0875891 11.7509861 10.7945706 12.7020283 12.4058506 8.4937602 10.7043977 10.5580061 10.7644767 11.1160345 4.7875892 11.6029198 10.4985169 0.9296395 10.5239353 8.5070394 4.2875166 5.4053457 11.2560402 9.8395038 11.6035822 10.1511978 4.0995393 8.3068214 13.1958885 12.2929241 10.0276427 10.1864091 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.8499636 NA 6.1963966 10.9129606 11.5732414 7.4314876 10.6681252 9.8354188 8.9052868 5.0793568 11.6389099 11.6523094 4.7109717 6.1680162 3.9296111 8.5842466 3.7369620 10.7774510 11.6813639 10.1311221 9.1020382 2.3890436 8.0537321 10.2010738 7.4726421 8.2080602 0.5146020 NA 10.6600808 7.0276429 8.0381349 7.8721251 8.7043979 10.1786174 10.3084473 5.1584299 8.4413631 0.9296395 8.4880313 13.1496866 7.6541247 8.0614679 NA 4.1775351 7.8867129 2.7369728 5.3725552 1.5145515 6.1292830 4.3236439 4.2871620 10.2577246 0.9296395 9.0844287 10.4813189 9.5689514 5.5878210 10.1421071 12.2351025 8.7625006 2.9296017 4.8122518 10.3941564 1.9296017 NA 0.9296395 4.0995393 12.661848 4.287162 8.587822 12.703677 10.598939 9.811489 12.078087 13.000654 9.119435 10.287163 13.051792 11.213567 8.792248 8.610849 NA 8.466829 10.636107 11.561924 12.111074 6.429457 13.755512 8.764082 7.129283 9.076816 6.768814 10.274495 7.584247 8.417451 10.609091 6.895395 3.630056 10.532773 7.623098 5.137504 12.222795 10.691577 10.958207 8.728892 8.848474 10.343239 7.330490 10.904438 9.546159 10.516450 10.165625 10.778234 10.431945 10.471191 10.653698 8.360063 NA 9.402251 7.787343 11.492092 8.217323 11.123444 8.682827 10.795730 10.087589 6.974005 14.906846 10.224231 10.303563 12.567028 10.665167 3.099531 -1.070360 9.720774 9.654125 9.467800 TCGA-A2-A0D0 60 0 NA 2048 breast stage iia t2 n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.421869e-06 5.548757e-07 13.3333333333333 23.3333333333333 6.66666666666667 26.6666666666667 30 7.4917208 7.5178930 10.7666735 8.0466613 7.7202313 8.6494901 9.1652464 11.3786662 10.6645776 11.7284851 9.6561333 10.7223433 NA 11.2993118 2.1796703 9.5507468 6.3855674 8.2300065 7.1168367 5.5015920 NA 9.1285612 7.3349418 10.0217278 10.3966295 5.1296210 2.8901548 13.1568130 12.7010852 NA 7.7453711 9.1908904 NA 1.3052118 8.4171989 10.4867605 9.1443980 7.8976513 8.3089460 10.9469448 -1.2796340 5.2280260 14.3349127 6.4583918 9.9478476 10.1719579 10.6531845 2.9681645 -0.2798091 8.9986810 12.1417705 NA 10.6383494 6.9345507 5.3201453 4.3926540 9.4900695 12.3595723 10.3604765 11.0639725 12.5841274 7.2976601 10.5475743 9.4958418 10.6737006 10.7138777 3.6271165 11.8259764 8.8103441 NA 10.7819403 10.0427231 3.0421540 3.5275833 8.3220025 10.2757794 10.3833449 9.1221778 0.3052118 6.8951572 9.2593904 13.7582503 10.4490024 10.2235605 1.508400 1.860800 -0.303340 1.753900 -0.014916 3.375900 1.088300 1.021800 0.250740 0.250740 2.824200 0.240930 -0.270090 -0.274640 -0.312130 0.880260 1.475500 0.359040 0.313060 -0.224040 0.260280 -0.302980 -0.302980 -0.288340 0.083198 0.083198 0.171510 3.030100 -0.291300 0.380390 -0.443010 -0.269570 -0.181250 -0.925850 -0.903050 -0.889740 -0.556770 0.000000 1.469400 -0.952540 0.997960 -0.445450 0.308730 -0.234470 -0.253940 0.181070 -0.270090 -0.351050 -0.274640 0.484750 0.385660 0.389490 0.356590 0.289450 0.961030 -0.235450 -1.292900 0.995510 -0.325650 -0.323040 -0.302980 -0.302980 -0.322750 -0.155030 0.181770 -0.286320 -0.248000 -0.299220 -0.390700 -0.029 -0.270 0.115 0.389 0.351 0.351 -0.285 -0.267 0.276 -0.311 -0.311 -0.303 -0.303 -0.265 -0.265 0.168 0.168 0.332 0.332 0.991 0.991 -0.248 -0.284 0.678 0.000 -0.260 0.878 -0.181 -0.181 -0.025 -0.159 0.000 0.000 0.359 0.359 0.251 0.251 -0.234 -0.234 -0.279 -0.279 -0.029 -0.270 0.115 0.389 0.351 0.351 -0.285 -0.267 0.276 -0.311 -0.311 -0.303 -0.303 -0.265 -0.265 0.168 0.168 0.332 0.332 0.991 0.991 -0.248 -0.284 0.678 0.000 -0.260 0.878 -0.181 -0.181 -0.025 -0.159 0.000 0.000 0.359 0.359 0.251 0.251 -0.234 -0.234 -0.279 -0.279 8.7103357 NA 7.4884162 10.8254854 11.8377124 6.1022067 10.2000119 10.3441770 8.5625348 NA 13.9836475 12.0510197 2.1796703 NA 0.3052118 8.1485920 2.8901548 11.0114023 11.5676805 11.3284864 8.8901566 0.3052118 8.4684245 10.0131283 5.5275865 -1.2796340 -1.2796340 NA 9.1600625 NA 8.0533867 9.0996100 7.2437938 10.5451784 10.4494275 2.4206710 9.5170823 2.7202347 8.1673148 12.5426032 7.9562460 6.4067322 2.4206710 1.8901743 6.9586362 -1.2796340 1.8901743 -1.2796340 5.9296845 3.0443242 4.0777813 11.6822238 0.3052118 10.1412444 10.0200119 11.1995066 8.7970470 10.0706184 13.5800575 9.3631858 1.0421540 4.0056335 9.7039378 2.5275959 4.0777813 -1.2796340 6.4950187 11.639099 9.696080 7.902626 11.299312 10.012553 12.400811 5.501592 10.697154 8.972897 10.085460 13.428992 11.746236 8.998681 9.082175 2.305183 7.055622 11.522950 11.149115 12.479079 4.627122 14.024689 8.079981 6.521131 9.957441 8.914988 10.259899 5.919905 5.406731 9.656133 10.543599 NA 9.643559 10.553122 8.680711 10.608975 10.102315 11.092553 7.683127 9.747446 5.228026 5.060082 9.455195 9.144398 9.922968 10.547971 12.160322 10.184267 10.924497 11.284143 8.504866 NA 9.293727 5.731458 12.141770 3.890155 10.638349 3.807695 11.020584 9.490069 7.431382 15.240942 10.765650 11.129092 11.881363 11.623172 3.807695 -1.279634 10.255507 9.552330 9.142296 TCGA-A2-A0D1 76 0 NA 1051 breast stage iia t2 n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 4 NA 5 1 2 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 9.710324e-07 5.895554e-07 22.2222222222222 40 0 17.7777777777778 20 8.49081478 10.58934310 12.18543258 8.51515695 7.99819437 9.68817319 10.56309128 10.44281663 9.95709696 14.32085300 6.94129180 10.84744546 2.08331550 16.38862075 2.49835300 8.01667404 5.54274403 8.99153687 4.84412449 13.14002402 -0.08666057 13.54291344 5.27093628 9.50864356 11.71630624 5.66827233 0.49835300 7.20340478 10.53498010 3.72073813 10.44037421 5.43694802 NA 4.33965051 9.49834861 9.78066476 8.69638442 8.90632453 8.47180688 11.37920750 15.67089326 8.88780062 15.22584362 6.09756655 10.60948424 9.76981157 9.80896128 6.64809581 1.72076001 7.42908615 11.55498626 0.49835300 11.17077390 3.66827800 3.49835300 4.16131533 9.17077384 11.97391311 9.58757839 10.75219605 12.60654628 6.39720228 11.18368140 10.01141820 11.12405738 11.29870923 3.91338731 11.84116403 12.25643292 NA 10.23136388 10.51608490 4.27199332 2.08331550 9.10567886 8.64809581 10.06186258 9.88061237 1.23529817 6.26211364 12.75377061 10.21545376 10.02712820 9.66073987 0.00715190 0.00798690 0.02742700 0.01817300 0.00756930 -0.00076256 0.04946900 0.04946900 2.21480000 2.98900000 2.00130000 0.00000000 0.00000000 -0.81298000 0.01272500 0.01272500 0.01063300 -0.78879000 -0.80530000 0.01635500 -0.00187090 -0.80571000 3.65690000 -0.76051000 0.74946000 -0.79323000 0.02855100 -0.00297860 0.02041200 0.00464920 -0.00698880 -0.80935000 0.02027200 -0.00767940 -0.38711000 -0.38711000 0.04946900 0.04946900 0.04946900 -0.82972000 0.03178800 -0.82444000 -0.03238200 -0.03238200 -0.03238200 -0.81026000 0.00000000 0.00395460 -0.81298000 0.01272500 0.01272500 0.01272500 0.01063300 -0.79999000 -0.83539000 -0.80530000 0.01635500 0.01635500 -0.00187090 -1.27210000 -0.80571000 -0.77509000 0.02911400 0.74946000 -0.79478000 -0.00297860 0.01887300 0.01342200 0.01342200 0.000 0.000 -0.813 0.000 -0.759 -0.759 -0.805 0.000 0.000 0.000 -0.399 -0.775 -0.775 -0.820 0.000 0.704 -0.768 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 -0.806 0.000 0.000 0.000 -0.384 0.000 0.000 0.000 0.000 -0.799 0.859 0.000 0.000 -0.162 -0.162 0.000 0.000 -0.813 0.000 -0.759 -0.759 -0.805 0.000 0.000 0.000 -0.399 -0.775 -0.775 -0.820 0.000 0.704 -0.768 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 -0.806 0.000 0.000 0.000 -0.384 0.000 0.000 0.000 0.000 -0.799 0.859 0.000 0.000 -0.162 -0.162 8.021911 10.041380 4.720744 11.204557 12.230092 6.570883 11.328335 7.857278 8.070506 NA 10.601636 11.200631 4.305701 -1.086507 4.979477 9.143406 11.997862 9.155369 11.485849 10.068204 9.367685 9.637047 8.163684 10.078293 5.935754 0.498353 5.681570 0.913416 10.957097 4.557245 9.147006 9.346972 5.042671 9.125238 10.615126 NA 8.147006 -1.086507 4.935752 13.728169 7.811231 7.746276 NA 0.498353 8.442817 6.654854 3.235313 0.913416 3.668278 6.075575 1.498353 10.443792 0.913416 4.083307 10.534522 8.866127 3.436948 10.799464 11.746474 7.582271 2.372813 2.235329 10.343839 2.613815 NA NA 0.498353 12.175499 6.083311 9.284073 16.388621 8.864671 10.518402 13.140024 7.360470 9.479440 10.348014 11.987695 7.078293 7.429086 6.032328 0.913416 6.984848 11.152686 10.98014801 13.40241863 8.05549286 13.55379821 8.40323406 10.04138044 11.05293737 8.09080581 10.15104420 4.64130903 6.54274248 6.94129180 4.66827233 -1.08650737 10.49128693 9.86976224 7.40608082 12.50046032 9.27642571 10.61295850 6.73993449 9.75809177 6.61382629 5.04267060 11.38964113 8.69638442 10.24037718 10.85773208 11.28025466 9.43302223 10.62505300 10.00151178 8.70780188 11.33912647 9.22629176 8.14460726 11.55498626 6.21716672 11.17077390 6.17077434 11.34043692 9.17077384 7.41323187 14.99455738 10.27642571 9.99885850 11.06249804 12.55498626 -0.08666057 1.23529817 10.21030228 10.08268476 8.50771061 TCGA-A2-A0D2 45 0 NA 1027 breast stage iia t2 n0 (i+) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 5 1 5 5 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.907385e-06 5.895554e-07 6.84931506849315 21.9178082191781 4.10958904109589 46.5753424657534 20.5479452054795 9.3985759 8.9488884 10.9372418 8.0798048 7.6595015 7.9777327 8.5110110 11.1856988 11.9711069 12.8660296 9.8126253 10.8992159 1.7340484 11.7373134 1.1490642 10.2641109 6.3256562 8.6301939 10.2457824 6.4033086 NA 10.3122976 7.8402291 9.5857441 9.9887960 4.7340321 0.1491293 10.2245420 11.8223763 1.3714473 8.8927796 8.2988145 NA 4.3969952 9.4520870 9.4329273 9.2007294 9.4313835 9.1481278 10.8355678 1.5640855 8.7377821 15.6267412 8.4355328 9.3914475 10.4863175 10.4944725 2.7340267 NA 8.9872208 11.1382252 NA 8.9072906 5.3454638 6.2079612 4.5413847 9.0539528 12.4608156 9.7144868 10.7594769 12.3026193 6.2079612 11.5683252 10.9163938 10.4501823 10.5172099 4.3454673 12.0082137 7.0915814 3.9564191 10.8480612 9.8506626 3.5196929 5.5641037 9.3511910 10.7343428 10.6885492 9.3577081 -1.4359633 4.9903695 12.6128471 12.1595954 9.9342473 9.4390862 0.581480 1.094100 -0.011060 0.601600 -0.033132 0.535030 0.564360 0.615520 0.450030 0.450030 0.581120 1.122100 -0.061555 2.777300 0.592420 -0.025809 0.532220 -0.016864 1.130500 -0.041567 0.568450 -0.077745 -0.077745 0.121670 0.525900 0.525900 0.772720 0.692230 -0.085457 0.613530 -0.054420 -0.027671 -0.089567 -0.036401 -0.031496 -0.018908 0.564360 0.615520 -0.072007 -0.063435 0.975230 -0.072541 -0.049289 -0.041024 -0.041024 -0.080674 -0.020824 -0.135490 -0.060211 0.564180 0.575050 -0.091155 -0.029857 -0.035857 -0.039529 -0.041838 -0.049154 -0.049154 0.506370 1.418600 -0.077745 0.121670 1.156900 -0.057654 0.567920 0.361490 0.587930 0.571370 0.466390 0.556 0.000 0.000 0.000 0.000 0.000 0.000 0.571 0.568 0.531 0.531 0.000 0.122 1.129 1.129 0.526 0.526 0.584 0.584 0.442 0.442 0.000 0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.564 0.564 0.000 0.979 0.581 0.581 0.000 0.000 0.212 0.212 0.556 0.000 0.000 0.000 0.000 0.000 0.000 0.571 0.568 0.531 0.531 0.000 0.122 1.129 1.129 0.526 0.526 0.584 0.584 0.442 0.442 0.000 0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.564 0.564 0.000 0.979 0.581 0.581 0.000 0.000 0.212 0.212 8.8849053 NA 5.3322890 10.0266070 11.4992698 4.5713006 9.7662286 10.2208246 8.0960905 -1.4359633 11.6822347 11.2785134 3.9216553 NA 2.6515684 8.6830458 3.7735533 10.4754967 11.6616431 10.4459834 8.6528930 -1.4359633 8.7138518 9.9200064 6.8678853 9.2809243 -0.4359633 NA 10.7036561 2.9564284 5.8587245 9.3097792 8.6843426 10.2923484 10.3152303 2.4710053 10.5212068 NA 9.2945748 13.3031470 7.0398381 7.7514570 -0.4359633 -1.4359633 8.0214858 2.2645364 4.5641037 NA 6.1565625 1.7594541 3.6933866 11.9124180 5.3842847 11.4302246 10.9851176 9.8238481 5.3585193 9.2453431 11.6701769 7.5697296 4.3189892 4.3969952 11.5413847 0.5641342 2.0235392 -1.4359633 7.2151563 11.431190 8.813218 7.572533 11.737313 10.206608 11.631707 6.403309 10.854124 8.519755 10.880103 12.809732 11.365005 8.987221 8.458922 1.564085 7.923855 10.734969 10.834984 12.133723 6.352008 13.685516 8.702377 7.355267 9.187072 6.318993 9.376090 7.071900 5.458923 9.812625 9.718290 -1.435963 9.744014 9.493363 11.427176 12.032474 10.126824 9.942942 7.990369 9.043885 7.928239 7.122526 10.433864 9.200729 9.652230 10.422863 10.646587 10.334769 10.873297 10.535648 9.300507 -1.435963 9.959842 6.843715 11.138225 8.093535 8.907291 6.031711 10.264111 9.053953 8.078030 14.818266 10.280496 10.037810 12.595289 11.034764 5.753928 1.734048 10.050437 8.689518 8.654217 TCGA-A2-A0D3 42 0 NA 1873 breast stage ia t1c n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 NA 2 2 4 4 5 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 36.3636363636364 9.09090909090909 9.09090909090909 22.7272727272727 22.7272727272727 11.0088598 9.6996299 12.2858971 9.6449025 8.5382107 9.8573834 10.4528383 8.3642135 9.6501223 13.2112002 10.9805932 10.3603261 2.5369481 13.3740611 5.4438486 8.7817190 8.0234589 8.0018450 11.0650874 13.1896047 2.0674666 14.4549317 3.6149571 9.7792226 11.2675233 5.7333571 -1.6330764 10.3208665 9.7129934 2.2739336 9.0438724 6.9780583 -0.6330764 3.3670355 9.5970544 10.9973010 10.6297160 11.7896243 10.7614965 11.2162435 -1.6330764 12.1502368 15.0934383 8.1766733 9.6267771 11.6871292 11.3197751 5.1219230 4.3670355 8.7366313 11.0576867 NA 10.8901057 4.8588861 5.8905950 3.4963217 10.3099149 11.9995747 10.8810082 13.5149145 13.0104955 7.0429912 11.1782078 10.9441913 11.3654480 11.3371398 5.1872135 12.2164390 10.5309979 NA 9.9701965 9.9425732 4.0414357 5.8264646 11.8067349 10.6084213 10.1553443 10.6527251 1.1744064 10.7593513 13.6289084 11.5498938 10.3624478 9.8538689 1.65410000 1.65410000 0.00110930 0.00110930 -0.03558500 -0.00235530 -0.00526100 -0.00526100 0.62087000 0.60106000 0.60106000 0.00208050 0.00208050 -0.00290910 -0.00290910 -0.00290910 -0.00235530 -0.00235530 0.00291330 0.00166420 0.00055459 -0.00415460 -0.00415460 -0.00415460 -0.00443120 -0.00443120 -0.00443120 0.00138680 0.00000000 -0.00622860 -0.00193990 0.00110930 -0.03558500 -0.04140200 -0.00235530 -0.00235530 -0.00526100 -0.00526100 -0.06037500 0.02034300 0.01796300 0.64030000 0.00152550 -0.00069303 -0.00413920 0.00249690 0.00208050 0.00208050 -0.00290910 -0.00290910 -0.00290910 -0.00290910 -0.00235530 -0.00235530 -0.00235530 -0.00140080 0.00166420 0.00166420 0.00055459 -0.68469000 -0.00415460 -0.00415460 0.00958830 -0.00443120 -0.00443120 0.00138680 0.00268440 0.00722170 0.00722170 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.503 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.601 0.601 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.503 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.654 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.601 0.601 0.000 0.000 0.000 0.000 8.0812794 0.3670355 3.8905926 10.8251841 12.1352182 7.2267551 11.8314520 8.3344762 8.2258230 -1.6330764 11.5132843 10.6257295 6.5218517 -1.6330764 3.6889636 8.6878344 3.4544918 9.9931992 11.3900951 11.5772486 9.6232426 -1.6330764 7.5394613 10.2234594 6.9061931 2.5369481 -0.6330764 NA 11.1204596 4.0949539 5.4859742 7.9945678 6.1614504 9.6523320 11.3675621 4.0108872 8.1017436 0.6889412 8.2814191 12.9912582 8.4505131 6.4059532 -1.6330764 1.9519980 9.2466171 -1.6330764 3.9519980 0.6889412 6.1614504 5.4479031 2.5369481 10.2466171 NA 6.7289776 10.5922413 9.8458035 6.8866696 8.6742346 12.4722876 7.6889622 3.7245848 3.8588861 12.8404225 1.8264773 -1.6330764 2.5369481 -1.6330764 11.523100 3.411426 9.231220 13.374061 10.619995 11.743295 13.189605 12.350651 9.750738 10.766846 13.747799 10.653592 8.736631 8.786994 -1.633076 7.218783 11.903524 11.260146 12.143775 7.000029 13.547988 9.646064 6.449183 8.963224 7.619699 10.342079 6.405953 7.979902 10.980593 4.633821 1.826477 12.003545 5.249677 4.887457 11.605289 10.714655 10.959725 9.255655 7.691214 12.292032 5.989087 10.092911 10.629716 10.542895 9.968340 11.034145 9.279923 10.466382 11.101320 9.591638 1.174406 9.573346 6.094002 11.057687 6.818245 10.890106 5.586203 10.493254 10.309915 7.818245 14.227806 9.954811 10.509460 13.327081 11.035254 2.826457 NA 10.645193 10.630010 10.088987 TCGA-A2-A0D4 37 0 NA 767 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino 1 1 1 NA 2 2 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.733986e-07 17.3913043478261 21.7391304347826 0 34.7826086956522 26.0869565217391 9.15355836 9.76679457 12.09224570 8.97348069 8.56555757 9.54924406 10.62902642 9.01639185 8.62026822 14.23889695 10.83356802 10.68422860 4.06812045 13.29146796 3.17830033 8.87465436 5.37623828 8.43291224 8.50657933 13.03810917 2.26074833 13.46933558 0.67581593 9.56806461 11.46940332 5.87874005 1.67581593 6.95811651 10.70462699 1.41278153 8.36812489 5.45716087 NA 3.58268846 9.45223300 9.86191428 9.71105725 10.12219410 9.45113588 10.42427244 5.69074951 10.47508164 14.26825704 8.29463821 10.68679429 10.90401745 10.67603481 4.50022843 6.93946050 8.77207600 11.00148026 -0.32427438 9.93436611 12.39689920 2.94882508 3.84572086 7.60653698 12.22357821 10.09189378 11.39104705 12.89355580 8.35410654 11.09206978 10.44430419 11.95589411 10.96601091 4.72019637 11.18475022 9.88687704 0.09085343 10.16765310 9.77031767 2.41348577 2.55026042 10.17763717 9.77383203 10.25700060 11.04029952 0.89816965 8.13796147 10.16698502 10.35058078 10.35116904 9.26263986 0.417700 0.417700 -0.798920 0.058128 0.032186 0.089754 -0.340750 -0.390480 0.714780 1.831000 2.980200 -0.267890 -0.718770 0.069933 1.072300 -0.803620 -0.760690 0.071725 -0.807460 0.882120 0.101690 -0.738510 0.148950 1.010100 -0.711910 0.099045 0.175030 0.137810 -0.314970 -0.314970 0.086245 -0.776400 0.073881 0.051719 0.000000 0.000000 -0.340750 -0.390480 -0.346950 -0.329550 -0.340400 -0.822670 0.039638 0.039638 0.081369 0.173970 -0.718770 -0.718770 0.971170 -0.737190 -0.803620 -0.779060 -0.760690 0.071725 0.148650 -0.809530 -0.763440 -0.761810 -0.778210 -0.748830 -0.737020 0.148950 0.076614 -0.701960 0.175030 0.137810 0.088306 -0.338330 -0.338330 -0.719 -0.719 0.000 -0.779 0.000 0.000 -0.391 0.000 0.000 -0.660 -0.764 -0.505 0.212 -0.784 0.000 -0.537 0.175 -0.293 0.125 0.138 0.138 0.000 -0.338 0.000 0.000 -0.799 -0.799 0.000 0.000 0.000 0.000 -0.390 -0.390 -0.356 -0.356 -0.777 2.997 0.000 0.000 -0.149 -0.149 -0.719 -0.719 0.000 -0.779 0.000 0.000 -0.391 0.000 0.000 -0.660 -0.764 -0.505 0.212 -0.784 0.000 -0.537 0.175 -0.293 0.125 0.138 0.138 0.000 -0.338 0.000 0.000 -0.799 -0.799 0.000 0.000 0.000 0.000 -0.390 -0.390 -0.356 -0.356 -0.777 2.997 0.000 0.000 -0.149 -0.149 9.7878050 NA 5.4658765 9.8619143 12.2733871 7.1949902 10.8517654 8.7934430 9.9223941 3.7632628 11.1256364 11.3757845 5.3576224 1.6758159 1.4127815 7.6222188 3.0908365 11.2105892 11.8199271 10.7674558 9.3802801 -1.9094175 8.8836278 9.0014803 6.6720377 7.0936521 1.5502604 NA 9.9398516 6.6377320 4.6454250 7.5806852 5.2507077 10.7277159 10.1020648 2.7912723 9.0421223 NA 5.7346934 11.9623578 8.6435067 8.6511705 NA 7.3785498 8.4351335 -1.9094175 5.8852522 0.6758159 2.1783003 6.8679286 -0.3242744 10.5804346 -1.9094175 7.5523171 10.1786319 10.1832643 3.4831580 8.7808353 11.8340941 6.6644843 2.0908534 1.6758159 12.4639066 3.6758046 -0.9091466 3.8721984 0.8981696 14.94607258 5.64542499 8.71197355 13.29146796 9.96735452 10.50789888 13.03810917 13.37858595 8.59962279 9.64877981 12.17738842 10.49651088 8.77207600 10.40230201 0.09085343 8.22654658 11.52285734 11.000543 11.740431 6.156926 13.286662 8.502349 3.135239 5.566572 9.906621 10.763870 3.517099 5.483155 10.833568 7.677677 3.948816 9.556914 6.862327 7.482597 9.408815 9.973481 10.034451 7.487442 10.846768 12.086340 2.338767 13.652704 9.711057 9.934759 9.475082 11.737284 8.779088 10.454425 10.928860 8.783453 2.178300 8.661907 5.227622 11.001480 3.135239 9.934366 3.997726 11.301661 7.606537 7.759722 13.004335 10.597641 9.696317 12.059324 9.231028 -1.909418 NA 10.521813 9.084484 9.944537 TCGA-A2-A0EM 73 0 NA 3094 breast stage ia t1 n0 (i-) m0 female 2002 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 NA NA NA 4 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 0 10.5263157894737 10.5263157894737 5.26315789473684 52.6315789473684 21.0526315789474 10.6249693 9.8572918 11.8704873 9.7109238 8.0647735 9.0599820 10.0323628 9.4857778 9.6875050 13.2945102 10.8018346 10.4964567 2.2067995 12.7960834 3.9982045 8.9982057 6.1210631 7.6304739 10.3651107 13.3639936 3.3137102 13.8133044 6.9616800 9.2860721 10.3344892 4.6148747 NA 8.6875048 10.2528670 2.7542889 8.3828695 7.9962006 NA 3.5507529 9.7853828 10.5741231 11.7162629 11.8094199 10.1897860 11.1048705 7.1465972 11.5519417 14.9014516 6.5111343 9.6076719 11.6465434 11.7644770 4.3392443 -1.4937027 8.5245527 10.8658277 -0.4937027 11.2840190 4.4605460 4.6961775 4.1502103 10.6142236 11.7262774 10.3836368 12.6825258 12.8183847 8.8550809 11.7052581 11.3586325 11.6419016 11.1627775 5.1645651 12.1931814 11.0611813 1.9657658 10.0503511 8.8975962 2.7633691 4.5724410 11.0352951 10.1067302 10.1823097 10.0401690 2.0913275 8.4750196 12.0145188 11.6340246 10.3581017 9.6446244 1.19450000 1.19450000 0.00194180 0.00097064 0.00903120 0.00346870 0.00013863 0.00013863 0.00000000 0.00000000 0.00000000 0.00138680 0.00138680 -0.00318020 -0.00318020 -0.00193990 -0.00456950 -0.00456950 0.00305220 -0.00221680 -0.01271300 -0.01711600 -0.01711600 -0.01711600 -0.02109800 -0.02109800 -0.02109800 -0.01551000 -0.00995650 -0.00995650 -0.00360110 0.00194180 0.01042400 -0.68177000 0.00346870 0.00346870 0.00013863 0.00013863 0.00013863 0.00108600 0.00513590 0.00000000 -0.00360110 -0.00360110 -0.00360110 -0.00360110 0.00138680 0.00138680 -0.00318020 -0.00318020 -0.00193990 -0.00193990 -0.00456950 -0.00456950 -0.00597760 0.00305220 -0.00221680 -0.00221680 -0.01271300 -0.69242000 -0.01711600 -0.01711600 0.61788000 -0.02109800 -0.02109800 -0.00954260 -0.00802440 -0.01519100 -0.01519100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.611 -0.692 0.000 0.000 0.618 0.618 0.000 0.000 0.000 1.195 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.611 -0.692 0.000 0.000 0.618 0.618 0.000 0.000 0.000 1.195 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8606022 NA 7.3920495 9.9841109 11.3084651 7.3176948 11.4435425 8.4609272 9.2264857 2.8986727 11.0908455 11.1602815 3.2067995 3.9326187 1.0913275 8.4488671 3.4605460 9.6529213 11.4552674 10.9982057 9.4400434 0.5063988 6.8462024 10.1840723 5.6252939 5.3007680 -1.4937027 NA 11.0404123 6.1062646 5.6459034 7.6611710 4.6961775 9.9230710 10.9977047 5.1062646 7.7279395 NA 8.4836324 13.1394046 7.6687439 7.6433439 -1.4937027 0.8283066 8.6096405 5.1928530 3.3643343 NA 3.7542782 5.3889954 1.0913275 10.2745370 -0.4937027 8.1716887 10.1761235 9.7859632 3.8639087 9.8622542 11.7929104 7.4192422 1.3137102 3.5507529 12.6485395 2.8282863 -0.4937027 2.3137102 1.3137102 13.198916 5.121061 8.203320 12.796083 9.780294 11.202233 13.363994 13.153811 9.492195 10.848149 13.536502 9.815829 8.524553 9.950850 -1.493703 7.139348 11.409670 10.89167588 11.90656501 8.05902154 13.80534419 9.16098874 4.23427138 9.30158056 8.18922463 10.23391154 6.17168922 6.60438421 10.80183460 6.23427329 3.46054600 10.82743520 10.31652264 5.44640182 11.86884447 10.23001359 10.20939110 7.51197714 8.52316085 13.82182069 4.02991221 10.34138850 11.71626289 10.36860260 9.68065419 11.41455761 9.14297726 10.57378700 10.53356753 9.50353220 NA 9.38914860 6.17807122 10.86582775 2.96578428 11.28401897 7.87485904 9.97539919 10.61422359 7.31711681 14.10957331 10.31048373 10.48470560 12.66866531 9.94410470 0.09125977 -0.49370273 10.64877891 10.23257083 9.63370220 TCGA-A2-A0EN 70 0 NA 4088 breast stage iia t2 n0 (i+) m0 female 2003 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 3 3 NA NA 4 4 4 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 1.733986e-07 32.1428571428571 10.7142857142857 7.14285714285714 32.1428571428571 17.8571428571429 9.9790278 10.1434873 11.2472851 9.5570499 8.2423772 9.3463112 9.4750713 10.0495072 10.4033591 8.8712409 10.2692639 10.2773484 5.4568817 12.7554351 3.4890676 9.8199788 5.5815079 9.0810791 8.6973679 12.5454606 -1.5985880 13.0351620 5.8773320 9.2880272 10.0797590 4.4890612 NA 10.1216852 9.0345943 4.1295221 8.3673833 8.1175610 NA 5.4996323 9.9460806 10.1489529 9.4589139 11.8160200 10.2914833 11.5597353 1.7235149 10.8737822 15.0184637 8.1421556 9.4582233 10.6988020 10.9968565 5.1020408 3.9251639 9.3881523 11.9696739 -1.5985880 10.9860918 5.6962192 7.8994512 5.0163091 10.4436003 11.5701145 10.4163170 12.4097650 12.7163239 8.4253536 10.6289142 10.1459241 11.0499566 10.8658895 4.3084919 11.1962180 10.3349208 -0.5983695 10.6256007 8.9761926 3.5050906 6.6823696 10.6349191 10.1184185 10.1697834 9.9499393 2.5715312 7.7414488 13.0325487 12.1813184 9.6286132 9.0472575 0.4361400 0.4361400 -0.0031859 -0.0031859 -0.0252780 0.4178100 0.0000000 0.0000000 0.0041632 0.0041632 0.0041632 0.0196430 0.0163520 0.0157270 0.0157270 0.0157270 0.0369350 0.0055529 -0.0020784 0.0147490 -0.4010900 0.0605080 0.0605080 0.0605080 0.0665150 0.0665150 0.0665150 0.0464170 -0.3522500 -0.3983100 -0.0110600 -0.0031859 0.0367940 -0.0337420 0.4178100 0.4178100 0.0000000 0.0000000 0.0000000 0.0132130 0.0196430 0.0041632 0.0322810 0.0322810 0.0322810 0.0322810 0.0163520 0.0163520 0.0175440 0.0157270 -0.0101710 0.0283410 -0.4127800 0.0143300 0.0143300 -0.0126840 0.0147490 0.0147490 -0.3832500 -0.3852600 -0.3757200 0.0605080 -0.4103600 0.0665150 0.0665150 0.0464170 0.0260920 -0.3506500 -0.3506500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.383 0.000 -0.385 -0.360 -0.360 -0.410 -0.410 0.000 0.000 -0.352 0.416 0.000 0.000 0.000 -0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.418 0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.383 0.000 -0.385 -0.360 -0.360 -0.410 -0.410 0.000 0.000 -0.352 0.416 0.000 0.000 0.000 -0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.418 0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3308573 5.7591505 7.0810797 10.3899287 10.7497739 6.8513255 10.6271078 10.3077531 9.0268512 3.6110543 12.3008616 11.3893463 2.8610224 4.5101264 3.2595738 8.5576820 4.5715251 11.2568569 11.5622584 10.6280113 9.0793186 4.6110543 8.0436507 10.2796499 8.3514256 9.2000707 2.4016032 NA 11.4136998 6.7547459 7.6846876 7.5765244 8.6683854 10.4512231 11.0598105 5.8528104 8.2595799 NA 8.1514687 12.4294187 8.8330966 8.5827513 -0.5983695 6.2964170 8.1631505 -1.5985880 5.0163091 0.9865930 7.7613484 6.1578885 4.9251592 10.2229744 NA 8.9024408 10.7002345 9.8466140 6.7458948 10.8929511 13.1912855 9.2742740 4.3323356 5.1829584 10.0047618 1.7235149 -1.5985880 NA 1.9865566 11.9490973 4.7766409 8.4267386 12.7554351 10.4666785 10.8775858 12.5454606 11.1802922 8.9837410 10.6560372 13.4934889 9.8466140 9.3881523 8.3888633 0.7235149 7.3024662 10.8806214 11.287105 11.836879 5.909394 14.096282 8.894454 8.387441 8.410028 7.615918 10.066797 8.538590 7.838311 10.269264 7.881380 5.115845 11.331042 5.658988 6.721497 10.948494 11.245520 10.675977 7.875305 8.636417 12.305481 7.376013 11.614165 9.458914 10.861543 9.644178 11.132069 10.664575 10.575276 10.840911 8.766828 NA 9.956835 7.983308 11.969674 7.483748 10.986092 7.299444 10.964795 10.443600 7.049058 13.684289 9.823664 10.707376 13.401071 10.486407 4.759151 4.234486 10.556734 10.014468 9.847648 TCGA-A2-A0EO 54 0 NA 2442 breast stage ia t1 n0 (i-) m0 female 2003 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 1 NA 6 2 3 3 6 6 NA NA 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.427581e-07 20.8333333333333 8.33333333333333 4.16666666666667 41.6666666666667 25 10.3457281 9.7006785 11.5962486 8.8990644 8.4171019 8.3536594 9.6029185 10.1587527 10.6032512 13.6256957 11.8343611 10.6711514 0.5207491 13.6135266 3.1057284 10.1178908 7.8199772 8.4807712 10.6178139 12.2693816 1.8426973 13.0461679 5.3281256 8.5610592 10.8373338 6.8426973 NA 9.7000566 8.9863358 2.7686925 8.2706387 8.4485475 2.4276598 4.7686978 9.6736880 10.3058131 9.0384389 11.5440040 9.4314121 11.1331772 1.1057451 11.3186336 15.4438648 7.5057862 9.3433403 10.8205498 11.3391519 4.1057284 -1.4791503 9.0482465 11.9915554 0.1056781 11.3530661 8.6679744 6.3086721 5.6082326 10.5504017 11.8757075 10.3453305 13.6902639 12.4400983 7.6654276 11.2452833 11.1796503 11.3949824 10.9157680 4.7302215 12.1443080 12.1286776 -1.4791503 10.4171019 8.9883751 2.6947019 5.4632824 10.9216489 10.1108886 10.1192873 10.1887680 4.5431370 8.4735105 14.0268290 12.9544853 9.6660647 9.6351625 0.5234100 0.5203800 -0.3012900 -0.2977500 0.0054380 0.5701300 -0.6210800 -0.6210800 0.3653300 0.3653300 0.3653300 0.0026923 0.0040810 0.2118300 0.2118300 0.2118300 0.0000000 0.0000000 -0.1598300 0.0779210 -0.2958600 -0.6235100 0.0135490 0.0096452 -0.2033100 -0.2033100 -0.2033100 0.0555730 -0.2892400 -0.2892400 -0.2847200 -0.3012900 0.0184400 0.0054380 0.0047757 0.0047757 -0.6210800 -0.6210800 -0.6210800 0.0093666 0.0129910 0.3629300 -0.3072700 -0.3072700 -0.3072700 -0.2930300 0.0040810 0.0040810 0.2118300 0.2118300 0.2118300 0.2118300 0.0000000 0.0000000 0.0044978 -0.1598300 0.0779210 0.0779210 -0.3029400 -0.6482200 -0.6235100 0.8829400 -0.0034063 -0.2033100 -0.2033100 0.0555730 -0.0097622 -0.1521600 -0.1521600 0.000 0.000 0.212 0.212 0.000 0.000 -0.160 0.000 -0.303 0.239 -0.388 -0.607 0.000 0.000 0.000 -0.203 -0.203 -0.289 0.231 0.000 0.000 0.000 -0.152 -0.285 -0.285 -0.301 -0.301 0.000 0.000 0.559 0.000 -0.621 -0.621 0.000 0.000 0.365 0.365 -0.307 -0.307 -0.103 -0.103 0.000 0.000 0.212 0.212 0.000 0.000 -0.160 0.000 -0.303 0.239 -0.388 -0.607 0.000 0.000 0.000 -0.203 -0.203 -0.289 0.231 0.000 0.000 0.000 -0.152 -0.285 -0.285 -0.301 -0.301 0.000 0.000 0.559 0.000 -0.621 -0.621 0.000 0.000 0.365 0.365 -0.307 -0.307 -0.103 -0.103 8.4822191 -1.4791503 5.3409467 10.3000784 11.6601609 7.7646812 11.5145924 9.2378290 7.8823844 1.9802081 12.2094569 11.4435675 2.6906853 4.6292925 1.6906853 8.2656033 4.4276598 10.6487637 11.7062644 10.4079901 8.9173742 2.4276598 7.6956953 10.4011182 6.6188010 6.9965029 NA NA 11.6778005 6.7204413 7.3599735 7.9574811 7.4064661 10.0015344 10.1583000 5.4155863 7.5868585 NA 8.5347900 13.0036404 7.3249006 7.4155871 0.8426973 1.5207491 8.3818565 -1.4791503 4.5207680 1.1057451 5.7204426 4.8258263 3.4749681 10.4522457 1.1057451 9.3631198 9.6539116 10.0681460 4.8606202 9.5753738 11.8558806 8.3265135 1.6906853 4.4749681 11.1564876 0.5207491 -1.4791503 NA 1.3281471 14.402838 4.520768 8.545909 13.613527 10.099614 10.528147 12.269382 12.235230 9.497548 10.816825 13.767733 11.454091 9.048247 8.704405 NA 7.318431 10.666702 10.897437 12.249540 7.688187 14.420173 8.905553 6.917374 9.241014 7.629294 10.124150 6.735089 6.754389 11.834361 6.186106 3.378747 10.755288 7.359974 5.568111 12.861176 10.184772 10.766916 8.586415 8.594911 12.050688 6.052151 11.791360 9.038439 10.643274 9.976610 10.896080 9.019619 10.186549 10.504832 9.234156 NA 9.695758 7.936025 11.991555 6.913087 11.353066 7.880519 10.182993 10.550402 6.996503 14.441471 9.847761 10.899335 12.807760 10.461817 2.105745 NA 10.247839 10.112292 9.170924 TCGA-A2-A0EP 56 0 NA 3603 breast stage i t1 n0 (i+) m0 female 2004 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 4 3 6 4 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-08 0 0 0 0 66.6666666666667 33.3333333333333 10.0671095 9.2565116 11.1626184 8.5446639 8.2989808 9.8849576 9.7100181 10.1270572 11.0103829 7.8047002 11.7029907 10.1956901 1.5801455 11.2097217 3.4977018 11.5254440 4.6770233 8.9298738 9.4263495 11.3903773 0.7321389 12.2996466 7.0468621 9.8635958 8.6354450 5.4977018 NA 13.8955708 8.7445110 1.4102325 8.8614489 7.5420947 NA 4.7677872 9.7781984 9.9160493 9.3238751 10.3257437 9.4996883 10.7403143 4.8531823 8.6652663 14.8474046 8.3688775 9.9657807 10.2435232 10.0773493 5.1381591 2.9337992 8.4963741 11.3500006 NA 10.7202824 7.3080832 8.5650560 6.1981405 10.0341193 11.5762438 10.4350311 12.0381135 12.7827627 7.7787441 10.4621264 10.2832972 10.7411546 10.6933260 4.2928774 11.2786744 9.6528165 0.4102325 10.7338554 8.6546017 3.9730877 6.9648260 10.4343385 9.8259794 10.1899571 8.9629067 4.8696691 8.6354450 13.8476322 13.2254208 9.8686443 9.7025594 0.0397610 0.0397610 -0.0276710 -0.0298100 -0.0291750 0.0179160 -0.0287650 -0.0287650 -0.0310860 -0.0310860 -0.0310860 0.0197830 0.0197830 -0.0250720 -0.0250720 -0.0250720 0.0232860 0.0251100 0.0172640 0.0268410 -0.0287650 -0.0790770 -0.0790770 -0.0790770 0.0193630 0.0193630 0.0193630 0.0182430 0.0397610 0.0397610 0.0066653 -0.0276710 -0.0295840 -0.0291750 0.0210430 0.0210430 -0.0287650 -0.0287650 -0.0287650 -0.0033243 -0.0033243 -0.0310860 0.0217440 0.0217440 0.0217440 0.0217440 0.0197830 0.0197830 -0.0250720 -0.0250720 -0.0250720 -0.0250720 0.0232860 0.0251100 0.0251100 0.0172640 0.0216030 0.0216030 -0.0287650 -0.0753810 -0.0790770 -0.0790770 -0.1094600 0.0193630 0.0193630 0.0182430 0.0217440 -0.0320410 -0.0320410 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.2383742 0.4102325 6.8448664 11.0354900 10.9479414 7.7349805 11.1588499 9.7368413 9.6824476 5.1244812 12.9939082 11.7719170 4.0540931 5.1381591 3.7677925 7.4518968 5.2557273 11.3302183 10.9568911 10.2709367 8.8696694 3.3644324 8.0082902 10.7597954 9.6221260 10.4501849 0.4102325 NA 11.1672109 7.1106775 7.6770240 7.8531810 6.5239806 11.2028938 10.1356040 5.3527515 9.7917807 -1.5898760 8.2790603 12.8153792 9.8307243 9.2304168 1.8696740 3.9020929 8.1833768 4.4326054 6.1517046 1.2176030 8.2208093 5.2313095 5.5901469 10.6696868 -0.5896589 8.8228076 10.3406054 9.7259534 7.7231210 11.1559121 12.3980346 10.4732957 4.9020929 6.0755733 9.6817007 -0.5896589 3.1106806 -1.5898760 3.0541018 11.613578 6.335051 8.455997 11.209722 10.489056 10.262377 11.390377 10.489722 8.813250 10.195690 14.011312 11.289821 8.496374 8.257295 1.580145 6.953270 11.070679 11.2610106 12.3647976 5.9493972 13.3057169 9.2159816 8.9110794 8.5356514 7.6629033 10.1345341 9.8073775 9.4060049 11.7029907 6.1517046 -0.5896589 10.7251041 5.2682173 7.9505594 10.5820400 11.4766633 10.4134042 7.7478593 8.7355432 9.6396574 9.4614467 12.1182169 9.3238751 10.9237186 9.6117491 11.0224151 11.1611540 10.2875218 10.3160008 7.8448658 0.4102325 10.2196481 8.2577961 11.3500006 9.2232171 10.7202824 7.7961000 11.5401647 10.0341193 7.1784219 14.1933383 10.2740368 10.6690982 12.3158127 10.9612250 8.7433931 3.8025551 9.7355432 9.4484709 9.6288009 TCGA-A2-A0EQ 64 0 NA 2426 breast stage iia t2 n0 (i-) m0 female 2004 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 2 4 NA 1 1 7 4 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1.907385e-06 5.548757e-07 9.58904109589041 47.945205479452 4.10958904109589 17.8082191780822 20.5479452054795 9.969070 9.118565 11.861489 8.787463 8.357005 9.129283 10.086473 10.484776 10.319590 13.457445 10.208746 10.919296 NA 12.606468 2.051407 8.256948 5.457391 8.798249 5.523888 12.623341 NA 13.416300 4.314436 9.510011 10.852299 5.549651 1.051372 10.689835 11.266447 1.899408 10.521448 6.229317 -0.270556 6.806287 9.536826 10.119640 9.415096 9.896889 10.476405 11.171378 14.094153 10.182227 14.740720 5.880639 10.747323 11.028965 11.510831 4.510829 5.329386 8.431644 10.395695 NA 10.930063 5.268629 7.718155 6.130350 10.271536 12.390358 10.124470 10.462910 12.496103 6.033251 11.259877 10.336441 10.630338 11.259390 3.484357 11.894064 11.966681 -0.270556 10.498482 10.381868 3.589943 5.948641 11.493098 9.870940 10.483106 10.507548 3.253036 7.943790 12.191718 11.515741 9.541648 9.748367 -0.1145900 0.4491800 -0.1666700 -0.1654300 1.4150000 0.1368700 0.2010600 0.2010600 -0.3144700 -0.3144700 0.4312500 0.1646000 0.1487500 0.3580600 2.6235000 3.6271000 0.0200600 -0.0074794 0.1511400 -0.3625000 -0.3367600 -0.1953800 -0.0027729 0.4722000 0.1365700 0.1365700 0.1365700 0.2758400 -0.0376280 -0.1145900 -0.1776500 -0.1666700 -0.1673900 -0.1610500 -0.3248400 -0.3248400 0.2010600 0.2010600 0.2010600 -0.2279800 0.1024900 -0.3144700 -0.5009000 -0.5032900 0.1578600 0.1578600 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8.5173737 10.8839727 8.9939138 3.5874490 -0.2705560 NA 10.0263873 5.7067516 7.8142793 10.6613166 6.1889033 9.2557648 10.3205259 4.8993980 9.0148733 NA 6.6059876 13.0548468 7.5812202 7.6212548 NA 0.7294440 8.1847985 3.4843573 1.8994077 0.7294440 8.6880237 5.2390084 4.7738645 11.8715781 0.3144065 9.8632555 10.2907590 9.8849217 7.4402779 11.2763655 13.8376688 9.1940169 6.4505696 5.8275040 10.7294710 1.0513721 NA 0.3144065 -0.2705560 13.535312 6.523887 9.637113 12.606468 10.079305 11.204444 12.623341 7.800934 11.113637 10.809622 12.727356 9.785431 8.431644 9.475145 2.051407 8.062626 10.921147 11.497655 11.793372 6.104511 13.813655 8.698138 9.020642 9.856176 8.622773 11.362930 8.554430 7.064861 10.208746 6.605988 -1.270556 9.918678 9.608288 8.158166 11.994793 11.244925 9.531179 7.536826 8.913106 9.225326 9.568675 11.126311 9.415096 10.049143 9.910002 11.786278 9.893121 10.837342 10.719930 7.977398 11.363601 9.181558 7.966968 10.395695 10.255481 10.930063 6.147323 11.510831 10.271536 7.565522 14.472438 10.606372 10.119640 12.567789 11.626182 8.408951 1.899408 10.125005 8.780680 9.503434 TCGA-A2-A0ER 63 0 NA 2263 breast stage ib t1c n1mi m0 female 2005 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 1 1 1 NA 5 3 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.733986e-07 40.9090909090909 13.6363636363636 4.54545454545455 22.7272727272727 18.1818181818182 10.755627 10.286006 11.960853 10.555815 8.097682 8.388487 10.413885 10.515099 8.846030 14.312018 12.034521 10.958233 -0.730488 12.779445 3.439477 7.852629 4.695810 8.593726 11.056428 13.391686 1.269572 14.296631 3.554945 9.428156 11.273415 5.687399 -0.730488 10.929542 10.237853 0.269512 8.011013 7.146063 3.076901 3.176434 10.220466 10.639143 11.526786 11.775109 10.265666 12.104511 13.354603 11.472282 15.308990 8.268898 9.011013 12.140874 11.858495 4.076901 6.708338 9.590346 11.543633 NA 10.985293 3.223747 5.469219 5.661864 10.808947 11.704825 10.193245 11.772999 12.938265 7.875026 11.230272 10.899449 11.447744 11.498665 6.825400 12.347446 11.421831 1.269572 10.233526 9.091320 2.597245 5.609394 9.768894 10.269194 10.335635 10.026936 2.793105 8.956921 11.941971 11.425313 10.192873 8.612732 -0.00764830 0.00041593 0.00000000 0.00000000 0.01391100 0.00527490 -0.00899060 -0.02899200 3.65690000 3.65690000 0.01838300 0.00513590 0.00221930 0.70232000 3.65690000 3.65690000 -0.02054900 -0.00277070 -0.13199000 0.00527490 -0.01078400 -0.05819300 -0.05819300 -0.05819300 -0.04888300 -0.04888300 -0.04888300 0.04329900 -0.00764830 -0.00764830 0.00000000 0.00000000 0.00291330 0.01391100 0.00485790 0.00485790 -0.00899060 -0.00899060 -0.02899200 0.00000000 0.00000000 -0.76192000 -0.75719000 -0.74142000 -0.03272300 -0.03272300 0.00221930 -0.00139150 0.70232000 0.62715000 -0.75046000 -0.77192000 -0.00277070 -0.00277070 0.63426000 -0.13199000 0.00527490 -0.00811060 -0.00539920 -0.10802000 -0.05819300 -0.05819300 0.00346870 -0.04888300 -0.04888300 0.00097064 0.00152550 -0.06879700 -0.07787800 0.000 0.000 -0.048 -0.750 0.000 0.000 -0.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.048 -0.750 0.000 0.000 -0.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 8.6500070 NA 7.6226925 9.7693917 11.1813124 6.2343480 10.0853294 8.7820196 8.5959754 1.8545144 11.7324316 10.8199560 2.7931051 -0.1454457 3.3139424 8.4911332 3.2237469 9.6989526 10.9582333 10.4606051 9.9983168 4.0509021 7.6640085 9.6456712 5.6532492 5.1884088 0.5914879 NA 10.9564840 5.4692185 5.2468261 7.0992689 6.4090973 9.6115038 10.6939747 3.1764345 7.5503166 0.5914879 7.2468261 13.5354173 7.4692185 5.8915966 NA 8.0492654 8.3962503 1.4394636 3.0244261 NA 5.0509065 5.2296648 2.5914640 10.1325705 NA 7.8164404 10.1263604 9.9586703 4.0244349 10.3852398 12.4982143 7.8412983 0.2695120 2.9699885 11.0779068 0.5914879 NA 2.5914640 -1.7302487 16.9129968 5.7371513 8.5641666 12.7794446 10.2436020 10.7007823 13.3916863 12.3785603 8.5082492 11.2034209 12.5861810 9.4313077 9.5903464 8.0177388 0.8544745 7.4065367 12.8264710 10.7830268 12.1718268 6.9097911 14.2145544 8.7783311 5.2582287 9.6548691 9.2772739 10.1019375 5.5269327 7.4090973 12.0345211 5.5824296 NA 11.2418077 5.9490259 8.5944351 11.1475968 10.0430973 11.0511105 9.5749123 10.0708500 12.8019018 5.1024356 11.1361757 11.5267864 9.9499055 10.3002130 13.8087047 8.4065371 10.7023487 10.5928822 9.0177388 NA 8.7600559 6.5349736 11.5436328 5.0639602 10.9852934 4.5733260 10.2723609 10.8089470 7.3675781 13.9491085 10.2432433 9.5462519 12.9115976 9.7493261 0.8544745 3.2762882 10.7586412 10.9302103 9.6287464 TCGA-A2-A0ES 52 0 NA 2190 breast stage iia t2 n0 (i-) m0 female 2008 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 3 NA 5 3 3 3 4 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-08 3.467973e-08 0 0 0 66.6666666666667 33.3333333333333 10.6812862 9.9845546 11.5991888 9.8911277 8.3379844 9.0832083 10.4910638 9.9524576 10.1512429 13.7045576 11.0898628 10.5668695 3.5714584 13.0041932 3.7809085 9.8399975 7.6799804 9.1135200 10.5816340 12.1514786 6.1260436 12.1350094 6.3788098 9.2423596 10.7294341 4.9637747 NA 11.2189567 9.1582954 5.8475811 7.7313272 8.3010764 -0.4285659 4.0633045 10.2301134 10.2278804 9.8723800 11.7021870 10.2640711 11.7162731 11.4830348 11.6816126 14.6932926 7.8516466 9.9632308 11.7555561 11.5170823 5.6799811 3.0308834 9.6734312 12.8720941 -0.4285659 11.6219845 5.9551593 5.1260436 4.2153136 10.7300653 11.9128354 10.2916998 13.4030597 13.0478854 7.9829668 10.9680604 10.8569214 11.3040470 11.3234180 4.8382408 12.0962421 11.0231819 NA 10.3070115 9.3421196 4.0950214 6.5139707 10.3400535 10.5121362 10.1474675 9.9366845 6.0871552 9.1573570 13.4496023 13.4082456 9.9218423 9.5088293 0.00014577 -0.03666700 0.00208770 0.00208770 0.00134170 0.00361480 0.00042307 0.00042307 0.72245000 0.37348000 0.00153260 0.00167140 0.00167140 -0.01221300 -0.00470070 0.86157000 0.03144300 0.03144300 -0.00068589 -0.00239990 0.00611620 -0.02479100 -0.02479100 -0.02479100 -0.01802000 -0.00027011 -0.00027011 -0.00082447 0.00014577 0.00014577 -0.00027011 0.00208770 0.00167140 0.00134170 0.00347590 0.00000000 0.00042307 0.00042307 0.00042307 -0.02862100 -0.02862100 -0.08797000 0.00139390 0.00139390 0.00139390 0.00139390 0.00167140 0.00167140 -0.03073300 -0.00470070 -0.08173100 -0.08173100 0.03144300 -0.06302500 -0.10170000 -0.00068589 -0.00239990 -0.00239990 0.00262420 -0.09405700 -0.02479100 -0.02479100 -0.07973500 -0.01802000 -0.00027011 -0.00082447 -0.00794160 -0.00149460 -0.00165570 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.0693074 NA 5.6903975 10.2171140 11.3296788 6.5317479 10.4047410 9.8999398 8.5666432 4.6589198 12.4971027 10.7350487 4.9808479 3.5256555 4.3528150 8.2314516 3.9977169 10.3317597 11.2301133 10.4582953 8.9840253 4.6799811 7.7212024 10.1479400 7.1144878 8.4632391 0.1563966 NA 11.4839707 7.2474130 8.6172151 7.8683719 9.6035014 10.1827663 10.1898411 6.1260436 7.9935204 NA 9.1907585 13.2876856 8.4738307 7.5742703 -1.4285659 5.5826824 8.1787858 -0.4285659 5.2008103 1.7413591 5.4903198 4.4304325 3.1564128 9.7643647 2.4783506 11.5296458 10.2112484 9.6226645 5.1564168 10.3844351 12.2612352 8.9234989 1.3787890 3.2718888 11.4523783 2.1564290 NA 0.8933622 1.5714341 11.907894 4.429435 8.334668 13.004193 10.417729 10.001385 12.151479 12.809114 10.584810 10.939689 14.116541 11.924740 9.673431 8.637545 -1.428566 7.952999 11.703795 11.2829075 11.9464950 7.0512361 14.0949532 9.6294473 6.6321519 8.9168609 7.7288028 10.3736488 7.0349805 7.3061656 11.0898628 6.1106138 7.2544504 11.0203462 7.6903968 5.9023727 12.5446148 10.3654652 10.6010879 8.7451328 8.1432082 13.0220869 6.3196486 11.1564885 9.8723800 10.3259256 9.1657801 11.5891339 9.6582552 10.6409054 10.4617199 9.3844350 -1.4285659 9.4229469 8.1899328 12.8720941 6.3330068 11.6219845 6.7110075 10.9788429 10.7300653 7.1298765 14.3835075 10.0200881 10.4914362 13.1164804 10.0497197 2.8933816 0.8933622 10.6318138 10.4560077 9.8591679 TCGA-A2-A0ET 58 0 NA 1066 breast stage iiia t2 n2a m0 female 2008 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino 1 1 1 NA NA NA 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.427581e-07 26.9230769230769 34.6153846153846 0 23.0769230769231 15.3846153846154 10.8112608 10.7043121 11.6085772 9.4307469 8.7339830 8.7293869 9.8090845 10.3776923 9.1092435 13.9672977 7.5543893 11.6056962 1.9229590 13.0087093 4.2030602 7.4621112 4.7594541 8.8713197 8.6787938 13.2180653 0.4375474 15.1252074 -0.2993827 10.2300589 9.7417627 8.8587488 -1.8841677 9.2754688 11.8429861 1.7005729 6.8503069 5.6624932 NA 2.7594541 10.0719737 11.0062417 11.1435034 9.8663044 10.0396676 11.2088500 -0.2993827 10.6019297 13.9561787 9.4673041 9.2805045 13.1467817 11.5986574 4.9735791 4.7738065 9.0849840 11.4236520 NA 10.8667230 3.8969596 6.0404103 3.0224921 11.1565721 12.4163790 10.7458645 11.0652418 13.0282997 8.1776438 10.8598006 11.2400872 10.6704261 11.1398714 5.8903835 11.0045309 10.0907289 NA 10.5693825 9.2973710 3.2859200 4.9357756 11.2037231 10.1313609 11.3248985 10.1517711 -0.2993827 7.1977465 11.6681465 10.3620411 10.3954981 9.0871411 0.78819000 0.77783000 -0.00496030 -0.00110100 0.44213000 0.37058000 0.35862000 -0.56112000 0.00172320 0.00172320 0.00000000 0.01564600 0.01564600 -0.55673000 -0.55673000 -0.55673000 0.35078000 0.35078000 0.18517000 -0.20107000 -0.34945000 0.46578000 0.46578000 0.46578000 0.25972000 0.25972000 0.25972000 0.58837000 -0.46839000 -0.42132000 -0.19069000 -0.00496030 0.44213000 0.00964750 0.38079000 0.38079000 0.35862000 -0.56112000 -0.56112000 -0.17076000 -0.22851000 0.00172320 -0.23919000 -0.23771000 -0.13054000 -0.14536000 0.01564600 0.01564600 -0.55673000 -0.55673000 -0.55673000 -0.55673000 0.35078000 0.35078000 0.32504000 0.20908000 -0.20107000 -0.20107000 -0.34384000 0.48689000 0.46578000 0.46578000 0.00001648 0.25972000 0.25972000 0.58998000 -0.02145100 -0.59998000 -0.59998000 0.000 0.000 -0.557 -0.557 0.351 0.351 0.209 -0.201 -0.349 0.487 0.487 0.466 0.466 0.000 0.000 0.260 0.260 -0.423 0.355 0.590 0.590 0.000 -0.600 -0.499 -0.499 0.000 0.000 0.425 0.000 0.358 0.358 0.359 -0.549 -0.181 -0.181 0.000 0.000 -0.160 -0.160 0.000 0.000 0.000 0.000 -0.557 -0.557 0.351 0.351 0.209 -0.201 -0.349 0.487 0.487 0.466 0.466 0.000 0.000 0.260 0.260 -0.423 0.355 0.590 0.590 0.000 -0.600 -0.499 -0.499 0.000 0.000 0.425 0.000 0.358 0.358 0.359 -0.549 -0.181 -0.181 0.000 0.000 -0.160 -0.160 0.000 0.000 8.4632186 NA 5.6312964 9.8405375 11.4544731 6.5865816 10.7818215 11.4027413 8.5425959 0.4375474 11.8179866 11.4034123 3.8435216 1.4375474 2.7594541 9.4245052 4.1599924 10.3143494 10.9822969 11.1192910 9.7275444 2.7594541 8.6401390 8.4917228 5.9100131 5.3152691 0.4375474 -1.8841677 9.2345384 5.5668091 4.2653469 7.1897386 3.1599843 9.3027081 10.9930733 4.8435166 8.2293394 NA 7.9936483 12.1019728 7.9610873 6.7844830 NA 0.9229590 8.8528447 3.9982406 1.8160262 NA 4.9229542 4.0253744 2.7005507 10.4778152 NA 5.3444166 10.4096438 10.2169165 2.9229590 9.8103906 12.7576491 7.4598930 2.5750218 3.3250554 11.3797468 3.2855206 NA 1.2855206 -0.8844340 13.2698222 4.4375274 9.0639648 13.0087093 10.6279873 10.9437339 13.2180653 10.1890695 8.6797563 11.0826435 13.5232304 11.1201690 9.0849840 8.3152696 0.7005285 8.3311306 11.5521789 10.266931 11.425784 7.675930 13.641362 8.397527 5.752221 9.623392 9.322612 10.202012 7.124026 6.945320 7.554389 6.900233 -0.884434 10.814519 9.401000 8.220170 7.982876 9.861272 10.940556 8.150396 8.177644 13.277674 4.985960 12.192631 11.143503 11.083724 9.350415 11.035578 8.274207 9.881712 10.286774 8.992882 NA 8.903272 6.831662 11.423652 4.069797 10.866723 6.239719 10.602267 11.156572 7.317868 13.626269 10.304495 9.569897 12.527704 9.750409 NA NA 10.401578 10.105701 10.047443 TCGA-A2-A0EU 79 0 NA 1043 breast stage ia t1c n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 1 4 3 1 4 3 8 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 2.427581e-07 34.2857142857143 17.1428571428571 5.71428571428571 11.4285714285714 31.4285714285714 10.5560180 10.2411168 11.4817970 8.5418606 8.6866168 8.4725475 10.2803635 10.1617717 8.8582412 14.4904894 11.1590168 10.7297878 0.9903740 12.5130243 3.7128159 9.5639919 3.7128159 8.9363738 6.3826621 13.4086190 3.1278479 13.8145079 3.1919732 10.0474862 11.0043651 3.4757723 -1.3316993 8.2249225 8.9733383 -0.3315178 7.6370835 8.2646063 4.5013054 3.6226141 9.7196255 10.7713765 10.6356429 11.9549743 10.0276170 11.0369231 2.1278644 11.9903447 14.5943419 7.2597141 9.7196255 11.4941704 10.9281598 3.6684142 0.2533842 9.1870697 11.2902396 -1.3316993 10.8739044 4.1919811 5.7664494 5.2075766 10.0894294 12.0362408 10.1237438 11.2347085 12.5525871 7.9139695 10.7595214 10.0780091 12.2578337 10.6620627 4.6226141 11.4274725 12.4103049 1.9903377 10.3403998 9.5798086 2.9163429 4.2533767 11.1178232 10.0730260 10.3976125 10.8060482 1.8383467 8.1257973 11.8461475 11.5846693 9.3014118 8.6485560 -0.01126400 -0.01126400 0.00000000 -0.00041585 0.02820000 0.40127000 -0.00512270 -0.00512270 1.24500000 1.49740000 1.49740000 0.06322300 0.05080600 0.37467000 0.37467000 0.37467000 0.73739000 0.73739000 -0.31669000 -0.39497000 -0.01752900 0.31498000 0.31498000 0.31498000 0.66106000 0.66106000 0.64175000 1.08140000 -0.04033100 0.00541390 -0.29756000 0.00000000 0.02820000 0.02820000 0.40127000 0.40127000 -0.00512270 -0.00512270 -0.00512270 0.07805400 0.07642200 -1.19170000 -0.40626000 -0.40626000 -0.40626000 -0.43152000 0.05080600 0.06065100 0.24622000 0.37467000 0.37467000 0.37467000 0.73739000 0.73739000 0.73739000 -0.31669000 -0.41221000 -0.41461000 -0.01752900 -0.42887000 0.31498000 0.31498000 -0.31167000 0.59458000 0.64175000 1.08140000 -0.41849000 -0.44491000 -0.44491000 0.000 0.000 0.375 0.375 0.737 0.737 -0.317 -0.412 0.000 1.361 -0.429 0.315 0.315 -0.319 -0.319 0.661 0.661 0.000 0.000 1.081 1.081 -0.418 -0.445 -0.298 -0.298 0.000 0.000 0.000 0.000 0.401 0.401 0.000 0.000 0.000 0.000 -1.192 0.306 -0.406 -0.406 0.000 0.000 0.000 0.000 0.375 0.375 0.737 0.737 -0.317 -0.412 0.000 1.361 -0.429 0.315 0.315 -0.319 -0.319 0.661 0.661 0.000 0.000 1.081 1.081 -0.418 -0.445 -0.298 -0.298 0.000 0.000 0.000 0.000 0.401 0.401 0.000 0.000 0.000 0.000 -1.192 0.306 -0.406 -0.406 0.000 0.000 8.7318118 NA 5.6907830 10.3895157 10.8073283 6.8321166 9.8906077 8.2917311 9.2580678 3.3122731 11.7366910 11.1347276 3.2533842 2.9903377 1.6684369 8.7611739 3.5263944 10.0553569 11.5717336 10.3852360 8.8631734 -1.3316993 8.0542793 9.8358347 5.3826638 10.4060865 4.7558810 NA 10.9945652 6.0778070 6.6684170 7.6021072 6.3337529 10.0918897 9.8111619 3.2533842 8.3601601 NA 6.4693162 11.4278887 8.3104683 7.6740411 NA 4.0946837 8.5602002 2.8383467 2.9903377 0.6683915 5.0946795 6.2233125 1.6684369 10.0467115 NA 7.3792233 10.5364674 10.2373228 4.1278479 8.8508110 12.1582646 7.8002735 1.6684369 3.5263944 10.1319409 2.6684142 NA -1.3316993 2.1278644 13.999266 6.290469 9.057510 12.513024 9.538781 10.631313 13.408619 13.140854 8.896033 10.967338 12.806128 11.298911 9.187070 7.835835 1.838347 7.906821 12.450493 10.500120 11.759356 7.347897 13.215489 9.546468 5.935203 9.847704 9.191979 10.012285 5.297775 8.184117 11.159017 6.766448 2.575312 10.378362 4.253377 7.291347 9.998773 9.188053 10.552587 8.865633 9.074622 12.641666 4.838342 13.216453 10.635643 10.261808 9.544934 12.026518 9.310468 10.876651 9.821335 9.488596 NA 8.371888 7.172242 11.290240 4.312273 10.873904 6.925805 10.245373 10.089429 6.897236 13.292641 10.502888 10.787682 12.525523 10.364949 -1.331699 3.253384 11.061002 9.436601 8.864404 TCGA-A2-A0EV 80 0 NA 968 breast stage ia t1c n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 1 NA 4 3 2 2 2 9 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.421869e-06 3.121176e-07 18 30 2 28 22 9.8261024 10.1432266 11.9699545 9.6202519 8.9888840 9.2605275 10.0560434 9.7505454 9.8349976 13.1709353 10.4851584 10.7366690 NA 13.6711996 3.5764980 8.4932586 4.9808890 8.3439065 8.8333341 12.7645806 -1.5108681 13.3397621 2.5764980 9.6086278 10.7464259 4.5551290 0.0739573 12.1908860 10.5611707 2.5764980 7.1328945 8.0027655 NA 4.1894767 9.5162530 10.6736035 9.8580901 11.3132013 10.0340026 11.5885503 0.4890291 11.2313475 15.0970618 7.4316405 9.7905342 9.5678561 11.6301873 4.9484700 -1.5108681 9.1702766 12.8439073 NA 10.9405068 6.1037473 6.4663188 5.3345289 10.2526654 11.9607133 10.5645173 12.6005813 12.6943732 8.3407870 10.6686362 10.6347633 11.3798723 11.2094961 5.1328935 12.9868899 10.9670493 -0.5108681 10.4688205 8.8030549 2.8799802 5.6589626 10.3294227 8.6972724 10.6330590 10.0445859 2.2963987 8.6438562 13.1758121 11.2086408 10.3163808 9.5578163 0.62825000 0.65259000 -0.01161100 0.69783000 0.00499690 0.30295000 0.30058000 -0.04284600 0.42032000 0.42032000 0.00124810 0.32157000 -0.36136000 -0.01013800 -0.04387300 -0.04387300 -0.36850000 0.32414000 -0.35817000 0.00042541 0.30809000 0.85799000 0.85799000 0.89146000 -0.00857660 -0.00857660 -0.00857660 0.32141000 -0.02589300 -0.02589300 -0.01876700 -0.02118000 -0.01574100 0.01922300 0.28961000 0.28961000 0.30697000 0.00000000 -0.01730500 0.32125000 0.31466000 -0.72323000 -0.00429290 -0.00429290 -0.00429290 -0.04708700 -0.36136000 -0.01587200 -0.01013800 -0.04387300 -0.00675020 -0.00675020 -0.36850000 0.32414000 0.32834000 -0.34366000 -0.02027500 -0.02027500 -0.00774820 -0.36737000 -0.40451000 0.89146000 -0.35345000 -0.00857660 -0.00857660 -0.05212600 -0.00415460 -0.14504000 -0.09775900 0.280 0.000 0.000 0.000 0.324 0.324 -0.344 0.000 0.308 0.362 0.362 0.453 0.858 -0.354 -0.354 0.000 0.000 0.000 0.628 0.296 0.296 0.000 -0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.290 0.290 0.292 0.000 0.322 0.322 -0.359 0.000 0.000 0.000 0.000 0.000 0.280 0.000 0.000 0.000 0.324 0.324 -0.344 0.000 0.308 0.362 0.362 0.453 0.858 -0.354 -0.354 0.000 0.000 0.000 0.628 0.296 0.296 0.000 -0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.290 0.290 0.292 0.000 0.322 0.322 -0.359 0.000 0.000 0.000 0.000 0.000 8.1790362 -1.5108681 4.7369674 9.7256503 11.7177065 6.0183115 10.8410815 8.8890421 8.7777659 3.3959265 11.6451211 12.0022981 4.2439280 0.4890291 2.5764980 8.0512807 4.3716843 11.3082193 11.5393969 10.8786694 9.3400063 5.7928189 7.3470189 10.3766395 6.9361208 9.3242989 3.7744392 -1.5108681 10.9911240 7.5631795 6.3092162 7.8087100 8.0852276 9.8856215 10.8781316 5.7369647 8.1110898 NA 6.9808913 12.0612646 7.9627439 6.8597261 -0.5108681 0.0739573 9.0340024 NA 4.4432353 -1.5108681 5.9566445 6.3655543 3.3470136 10.6001737 3.1894767 8.6726735 10.5238370 10.0678824 4.5975610 10.1360468 12.9107085 9.3640195 3.5764980 4.2963913 9.1989835 0.0739573 NA 1.0740258 1.9484513 13.3355054 5.0588922 8.6451212 13.6711996 9.9257497 10.7178567 12.7645806 12.9644549 9.2662935 10.3092170 13.1771791 8.4079012 9.1702766 9.0945177 0.0739573 8.1790362 11.7186080 11.053426 11.958680 7.070239 13.639219 9.398931 6.623465 8.819955 9.816029 10.047263 7.404918 5.296391 10.485158 6.618321 4.489035 10.678863 4.948470 7.664363 10.406783 10.556472 10.840529 8.379303 8.752307 12.428801 6.283453 11.247632 9.858090 10.273264 9.817152 10.564851 9.689937 10.625388 10.675462 9.479142 2.395940 9.729561 7.753481 12.843907 6.500265 10.940507 7.216958 9.869499 10.252665 8.010776 13.347893 9.975873 10.145016 13.582332 10.338052 1.948451 3.658965 10.451573 10.513832 9.326666 TCGA-A2-A0EW 53 1 1884 NA breast stage iiic t1b n3a m0 female 2008 NA yes infiltrating lobular carcinoma 26 white not hispanic or latino 2 2 3 NA 4 3 3 3 4 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.040392e-07 30.7692307692308 7.69230769230769 15.3846153846154 23.0769230769231 23.0769230769231 11.0118036 10.1918952 11.8886333 9.9137522 8.2221597 9.2734348 11.2668131 9.5492129 9.5702052 11.1300767 11.5246184 10.5230563 5.2170174 12.7906275 3.9622066 9.9121618 6.1609827 9.0174849 10.5454563 12.5266984 2.5027634 13.0263328 7.5981679 9.7085702 10.5461400 5.8603222 NA 9.7116148 9.2543148 5.2442363 8.3991031 7.4006165 1.3101074 5.2709550 10.2659832 10.4518680 10.4555122 11.7428168 10.3161513 12.2106692 10.5509171 10.7164827 14.4090273 8.7438246 9.5928832 11.8712773 11.5111995 5.3607505 4.9946250 9.6152105 12.6793336 NA 11.6786323 5.8336871 6.2643225 4.6925946 10.7396820 11.7833967 10.0664438 12.6875687 13.0150793 7.7435621 11.0903140 10.8132502 11.4739552 11.5265252 4.8950893 11.5239243 9.7393830 0.5027379 10.4156602 9.1082503 4.0616466 6.8864758 10.3165521 9.9870903 10.0520743 9.8088326 3.7881741 10.3129408 13.2855132 13.3056911 10.0060997 9.7453496 -0.00207840 0.00444110 0.00847430 0.00555290 -0.00802440 -0.00027724 0.00110930 -0.00419480 2.15140000 0.02020300 -0.00232100 0.00513590 0.00513590 0.00875280 0.88466000 1.59100000 0.00110930 0.00110930 -0.08293400 0.00314990 0.01768400 0.00583090 0.00583090 0.00583090 0.00180300 0.00180300 0.00180300 0.01782400 0.01433000 -0.00207840 0.00000000 0.00847430 -0.00802440 -0.00802440 -0.00027724 -0.00027724 0.00110930 -0.00419480 -0.00152430 -0.00110870 -0.00110870 -0.45126000 0.00791750 0.00791750 0.00791750 0.01572700 0.00513590 0.01391100 0.00972760 0.00332990 -0.43875000 -0.43875000 0.00110930 0.00110930 0.00110930 -0.08293400 0.00314990 0.00666530 0.02454800 -0.43669000 0.00583090 0.00583090 0.00666530 0.00180300 0.00180300 0.01782400 0.00777830 -0.42025000 -0.43918000 0.000 0.000 0.000 -0.439 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.442 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.442 0.000 0.000 0.000 0.000 0.000 8.5594084 2.0877344 6.6826800 10.6249518 11.3251425 6.8977910 11.3584180 10.0356722 8.6474293 6.1393958 12.3505134 10.9602390 4.0877344 3.7507030 4.5471660 8.5471648 4.2576594 9.8088326 10.9264121 10.4320292 8.9764765 5.0726246 8.0065965 10.4130388 7.7315899 9.5430606 2.2032012 NA 11.3217524 8.5981679 8.0065965 9.3975886 8.4111635 10.1927121 10.2979989 5.8950893 8.3133425 1.0877344 8.6139066 12.7702160 8.2726088 7.8179206 -0.4971602 6.5742332 8.1284795 -1.4973639 3.7122216 1.3101074 6.2374796 5.2587262 4.5251418 10.0650134 1.6726969 9.6230087 10.2534778 9.7030564 6.0105650 10.1466271 12.0997759 8.9153407 2.5902427 4.1466308 11.0248619 1.6726969 NA 1.5027889 3.4569638 14.3102113 4.9121612 8.5594084 12.7906275 10.4999504 10.3769838 12.5266984 12.3791919 9.9505773 10.9787576 13.8138806 11.6884207 9.6152105 8.4216340 -0.4971602 7.7122243 11.4942927 11.34571044 11.97266702 6.65758856 13.99856158 9.14932949 6.92903585 8.74713460 7.89723377 10.72834282 7.41266384 7.47143786 11.52461840 6.31655126 2.75069225 11.30508526 5.55805330 6.29757662 11.58890709 10.39455455 10.59486733 8.68268003 8.52513865 12.35559295 6.25765750 11.99119975 10.45551217 10.21099260 9.64997573 11.85205211 10.19930377 10.24086311 10.63205387 8.64360081 1.08773438 9.31541339 8.35104964 12.67933362 6.91216122 11.67863227 6.91639901 10.66438150 10.73968198 7.28740580 14.22619184 10.21830398 10.16008936 12.77612941 10.58358837 3.25765938 0.08773438 10.77860441 10.60146096 10.05062943 TCGA-A2-A0EX 46 0 NA 752 breast stage iib t3 n0 (i+) m0 female 2009 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 3 NA 4 3 3 3 3 6 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.040392e-07 27.7777777777778 22.2222222222222 5.55555555555556 27.7777777777778 16.6666666666667 9.5045356 9.6679721 11.8623632 9.0031943 8.3339581 8.3241373 10.0909467 9.4558958 10.4477781 9.2719618 10.9877245 10.2493065 4.0563668 13.7664462 2.8084468 9.8865881 4.8528328 8.2801124 9.1303654 12.7459031 -1.1916561 13.7154688 4.4808597 9.0251833 10.7706104 4.0178863 NA 9.9189206 9.7487509 2.2678653 7.8112527 7.1393539 -1.1916561 4.4522923 9.2061120 10.2446283 9.0408582 10.4590404 9.7949906 11.1337428 -1.1916561 11.1150687 15.0464688 6.6044776 10.2760428 11.0575508 10.9588193 5.3933990 3.1303708 8.7799810 11.4850556 -0.1914914 11.1861901 7.9783621 5.9783627 4.1303626 10.3187071 11.9491074 10.3102746 12.5082267 12.4169232 7.7362152 11.0411581 10.7138958 10.9527769 10.8311520 4.3934025 12.3258607 11.6091351 -0.1914914 10.1643390 9.5583069 2.8316949 4.5897994 10.6198121 10.1659893 10.1013341 10.8259417 4.8958988 8.8027907 12.8060579 11.7273006 9.9396512 9.4887970 0.0111210 0.0012481 0.0016642 -0.0144270 0.0038854 0.7709900 -0.0261670 -0.0412170 3.6569000 0.5530100 2.9123000 -0.0232170 -0.0232170 -0.0355850 -0.0049844 -0.0182560 -0.0313590 -0.0313590 0.0155870 -0.0106810 -0.0045695 0.0331270 0.0331270 0.0331270 0.0339720 0.5013400 0.5013400 0.0231450 0.0589400 0.0111210 0.0172640 0.0203880 0.0038854 -0.0071958 -0.4855400 -0.0107720 -0.0261670 -0.0412170 -0.0342230 0.0921700 0.0888370 -0.4969400 0.0144700 0.0144700 0.0144700 0.0144700 -0.0194520 -0.0194520 -0.0355850 -0.0181710 -0.0376260 -0.0376260 -0.0313590 -0.0313590 -0.0313590 0.0155870 0.0065262 0.0065262 -0.0045695 -0.4782800 -0.4603500 0.0331270 -0.0515860 0.0339720 0.5013400 0.0231450 -0.0358570 0.0260920 0.0394780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 -0.460 0.000 0.000 0.000 0.000 0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.449 0.000 0.000 0.000 0.000 0.000 -0.497 0.553 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 -0.460 0.000 0.000 0.000 0.000 0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.449 0.000 0.000 0.000 0.000 0.000 -0.497 0.553 0.000 0.000 0.000 0.000 8.4879176 NA 5.2513820 9.8006676 11.8643976 7.3600684 11.2583597 9.1624553 8.6136009 3.8528278 12.2562954 11.1874393 1.9783787 1.3934162 2.5088850 7.9428634 3.8959036 9.2841708 11.3933998 9.7900047 9.1856478 2.6157929 7.4304894 9.9332050 7.1122185 4.5633229 NA NA 10.8741900 7.6318049 7.9858567 7.8280279 7.0984564 9.5017240 9.9926928 4.3630239 8.3142488 -1.1916561 8.1190500 13.6030563 6.2007554 7.7568045 NA 5.4666500 7.9607219 -0.1914914 3.7153333 NA 5.5633259 5.9064697 3.6664158 10.8606657 0.3934162 9.2199482 10.1807583 9.6987015 6.9221800 9.7280457 11.5832244 8.5482181 0.8084262 4.2007554 11.2018278 2.6157929 NA -0.1914914 1.3934162 13.082306 4.666416 9.065825 13.766446 10.195378 10.038458 12.745903 11.951980 8.987102 10.498435 12.734641 11.935142 8.779981 8.541453 NA 7.455896 10.713448 11.151623 11.964678 5.715328 13.601429 9.045647 6.993313 9.350502 7.563325 10.115809 6.863719 6.927379 10.987724 7.556630 4.234701 10.554532 6.008110 5.338727 11.118766 10.347111 10.130929 9.282143 9.000730 11.920877 6.243065 9.473053 9.040858 10.786433 9.893910 11.206379 8.832192 10.565411 10.377344 9.347596 NA 9.421260 8.066815 11.485056 6.802790 11.186190 7.739174 10.287712 10.318707 7.027606 15.210667 10.244108 10.628217 12.654711 10.278079 4.300292 -1.191656 10.079900 10.101909 9.206112 TCGA-A2-A0EY 62 0 NA 1925 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 3 2 4 NA 5 1 2 6 6 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.334966e-06 2.150143e-06 18.5185185185185 61.3756613756614 3.17460317460317 13.2275132275132 3.7037037037037 9.8198099 8.8893646 11.7635300 9.4198793 8.3341495 9.5495146 9.8343386 9.8504391 10.7418074 14.2990698 10.0930298 10.6804068 4.9245560 16.6075538 4.8349185 8.2620417 6.4802522 8.6475466 11.0102264 12.9080284 NA 12.8888774 3.3568762 9.5725757 11.6118980 4.1041018 NA 9.9825731 11.5990228 1.5495213 7.8532952 6.5438686 -0.4504787 4.7393405 10.9040394 11.6108857 9.2943483 10.3950046 10.0973731 11.6893856 11.2007905 10.5853446 14.7242257 9.3987554 9.2103930 11.1031439 10.3512229 5.1193686 5.3044015 8.8406851 11.1628436 NA 10.2126278 5.6475476 6.6102099 5.0413657 11.1879504 11.3439304 9.5466941 11.9728931 12.6486979 7.2603212 10.7638336 9.9813621 10.6749280 10.7322192 4.2774343 11.7989243 9.0068955 -1.4504787 11.0229666 9.6402885 4.2538305 5.4683780 10.9991791 10.6716954 10.0478651 10.3500101 4.0730747 10.4067180 13.1226883 10.6807285 9.3957884 8.8882510 0.64293000 0.65903000 -0.01670400 0.67641000 -0.39475000 -0.39121000 0.68031000 0.36526000 -0.00871460 -0.00871460 0.73416000 -0.02022900 0.00000000 0.35741000 0.34583000 0.34583000 0.31225000 -0.02397700 0.70701000 -0.37200000 -0.36793000 3.65690000 3.65690000 -0.02315500 0.27537000 0.16554000 0.16554000 0.37973000 -0.37876000 -0.37966000 -0.01780300 -0.00774820 -0.06464300 -0.80559000 -0.40041000 -0.80053000 0.68031000 0.36526000 0.36936000 0.39053000 -0.08559000 -0.00871460 -0.27176000 0.47426000 -0.37234000 0.65627000 0.00000000 0.01509300 -0.38616000 0.34583000 0.34583000 0.34583000 0.31225000 0.31129000 -0.39040000 0.69197000 -0.38100000 -0.39036000 -0.78302000 -0.41860000 -0.37752000 -0.05401600 0.05025000 0.77349000 0.16554000 0.37973000 0.23040000 2.34690000 -0.00097017 0.000 0.000 0.000 0.346 0.312 0.000 0.707 0.000 -0.368 -0.354 -0.354 -0.354 0.000 -0.388 0.000 0.275 0.275 -0.380 0.263 0.380 0.380 0.223 0.000 0.000 0.000 0.000 0.316 0.000 0.000 -0.400 -0.400 0.221 0.308 0.391 0.391 0.000 0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.346 0.312 0.000 0.707 0.000 -0.368 -0.354 -0.354 -0.354 0.000 -0.388 0.000 0.275 0.275 -0.380 0.263 0.380 0.380 0.223 0.000 0.000 0.000 0.000 0.316 0.000 0.000 -0.400 -0.400 0.221 0.308 0.391 0.391 0.000 0.734 0.000 0.000 0.000 0.000 7.204151 8.337417 4.853297 10.555139 11.309819 5.441540 11.144072 8.448056 9.069721 2.008953 12.525273 11.606872 4.221939 3.549509 3.975777 8.214850 4.382404 10.376460 11.813957 10.472471 10.359283 1.719446 7.494959 10.529297 8.000726 5.480252 1.134484 NA 10.827674 7.489094 9.155920 8.878190 9.953592 11.259018 10.181601 3.356876 8.701799 -1.450479 7.898243 12.226904 7.988306 7.634323 -1.450479 6.729424 8.459407 1.871449 2.134484 7.061267 6.249953 6.759553 4.008944 10.715678 -1.450479 8.523929 10.620642 9.731909 4.853297 10.771404 12.264189 8.447360 3.941829 4.134476 10.278710 3.193378 NA -1.450479 2.719446 11.818327 5.871442 8.636977 16.607554 10.332513 10.841549 12.908028 11.258167 9.312660 10.772611 12.972762 9.120319 8.840685 7.100262 3.073083 7.731909 11.182055 11.9976309 12.8233830 5.9158364 12.7738125 8.4964208 6.8623981 8.7131641 8.7017992 11.3067191 7.5466939 8.9059664 10.0930298 5.7194408 -1.4504787 10.0813833 5.8163002 6.9836424 10.0074084 11.3650980 10.3728818 8.1823278 8.4787729 10.0135496 6.7686832 12.1880082 9.2943483 9.8063129 10.1484976 11.5542617 9.9487925 10.4271821 11.1924688 9.2166261 5.5939095 9.9982607 6.9059670 11.1628436 7.0292950 10.2126278 6.8256394 11.7084398 11.1879504 7.1307147 13.2845416 9.4824674 10.3640970 12.7637578 10.8840672 4.4802522 -0.4504787 9.8595592 9.4609066 10.1222148 TCGA-A2-A0ST 62 0 NA 3017 breast stage iia t1c n1a m0 female 2003 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 2 3 4 3 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 1.040392e-07 0 57.1428571428571 0 14.2857142857143 28.5714285714286 10.5611490 9.6125073 11.5253770 9.5053495 8.6651437 9.4744519 9.1191754 10.6148704 10.6129014 12.9773858 11.0073003 10.7731172 -0.2251602 12.0949747 2.5822429 10.0363867 5.0786611 9.5163463 9.5255864 9.1618197 1.7748819 11.5664493 7.4959789 9.4538139 10.4688018 5.5950590 0.7748398 11.5067838 10.8413050 1.9448210 9.1832091 7.5364306 2.0968016 6.9597551 9.8503585 10.0322671 9.4631297 10.6613380 10.1401082 11.3699037 3.7748819 8.7888997 14.8190813 7.7387293 9.4813322 11.4090097 10.6911320 4.9843341 0.3598585 9.3052857 10.8399588 NA 11.4328676 6.3895892 8.5297667 6.0036989 9.6359662 11.9166672 10.2757212 11.3720008 13.0377817 6.2506130 10.7979406 10.5494234 11.1794887 11.1658544 4.5822368 11.8194442 8.8288051 -1.2249916 10.7030276 9.5205537 3.8223325 6.8301615 11.6649536 10.0204321 10.3724664 10.0024952 3.2984384 6.5562393 12.9728639 12.3717679 10.4155762 9.7854075 0.1365800 0.1363700 -0.0166030 -0.0166030 -0.0655810 -0.0280810 0.0701540 1.7433000 0.0195030 0.0195030 0.0195030 0.1285900 0.0393780 0.8319600 0.0050130 0.3623100 0.0989970 -0.0567120 0.1917800 -0.0610170 -0.0544200 -0.0488830 -0.0078995 0.0042938 -0.0459060 3.0887000 0.0418830 -0.0016629 0.0134920 0.0134920 -0.0089304 -0.0166030 -0.0655810 0.0496820 -0.0280810 -0.0280810 0.0701540 0.0701540 0.1024900 0.0501080 0.1361300 0.0195030 0.0000000 0.0000000 0.0000000 -0.0523960 0.0393780 0.0393780 -0.0389860 0.0050130 -0.0620920 -0.0620920 0.0989970 -0.0567120 -0.0567120 -0.0633010 -0.0610170 -0.0610170 -0.0544200 0.0447150 -0.0488830 -0.0078995 -0.0602110 -0.0459060 0.0418830 -0.1661200 0.2030500 -0.0681270 -0.0681270 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.123 0.000 0.000 0.203 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.123 0.000 0.000 0.203 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.9647042 -1.2249916 4.3294681 10.6911320 11.8920354 6.3428356 10.6851473 10.1594904 9.2549020 1.0968016 12.6462071 11.3538298 3.5297710 1.0968016 3.4187297 9.1596630 4.7521598 11.8548641 11.1733558 10.3621881 9.0263619 5.8192722 8.8369255 10.6685601 9.7188592 4.0602809 -1.2249916 -1.2249916 11.1255424 7.0695003 8.5129715 8.0695003 9.4151242 10.2572437 10.4556784 6.3895892 9.6567581 4.0602809 7.5982468 12.9511304 8.1607417 8.5430635 -0.2251602 2.0968016 8.0556501 0.3598585 2.2343174 2.9448022 9.0498398 3.2343174 6.0968079 10.8889470 1.5822188 9.9609935 10.9009385 9.7972471 7.7888997 11.4620363 14.6753217 10.8321942 7.4078745 6.0322662 10.3831341 -1.2249916 1.7748819 1.9448210 4.7748819 11.6694717 10.6010306 8.5095890 12.0949747 10.3347344 10.3385523 9.1618197 10.3135533 9.7783972 11.4934122 13.7369168 12.1647795 9.3052857 8.0346224 0.3598585 7.5692951 11.0680636 10.923356 11.635384 4.904161 14.030717 9.023993 9.193786 9.157503 8.425931 9.996303 9.451718 8.256679 11.007300 10.520133 1.582219 10.705986 8.194840 8.740938 13.338374 11.632860 10.075804 7.290579 8.575779 10.383596 10.336167 11.160521 9.463130 10.622720 9.758586 11.111386 10.954166 11.309912 10.744985 8.997674 1.096802 9.601134 8.165048 10.839959 10.815854 11.432868 4.266734 10.962850 9.635966 7.974552 14.519526 10.209508 10.592662 12.832194 11.011193 8.757873 4.096810 10.627409 9.605395 9.350419 TCGA-A2-A0SU 66 0 NA 1662 breast stage iia t2 n0 (i+) m0 female 2006 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 5 2 2 3 1 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 2.080784e-07 23.5294117647059 23.5294117647059 0 41.1764705882353 11.7647058823529 10.1682549 9.6271468 11.8231012 9.5153299 8.8406486 8.7938393 10.5182971 9.6137337 10.5530221 12.9166712 11.8455508 10.5305251 1.5913443 13.2440187 4.0694100 9.0259941 8.2678265 8.3270428 9.4844505 13.5286870 2.2434558 14.6199625 5.0319377 8.8284050 10.6188769 7.7726953 -0.2159149 9.5841019 8.7670045 1.7840014 6.6969008 7.3036474 1.1059462 4.1059378 9.7162256 10.4818473 9.6349791 10.6141299 9.8467316 10.8784185 1.5913443 11.9963552 14.6018439 6.9255046 10.4831495 11.5474307 11.2798658 4.2434406 0.3689359 8.9539360 11.3883324 NA 10.8741232 4.5913683 4.9934660 4.4844475 9.9775362 12.0357891 10.8070721 11.1706817 12.9267561 7.0031794 11.2149860 10.9187965 11.3016802 10.7025015 4.6419910 11.9235622 12.1154877 NA 10.3149048 9.0647816 3.4278609 4.2434406 10.5275831 10.3031556 10.3904161 9.3385998 2.1059462 7.7352954 11.8912279 11.2574629 10.4524526 9.7577082 -0.01587900 -0.01587900 0.00319100 0.00319100 0.00000000 0.00152550 0.00000000 0.00000000 0.00110930 0.00110930 0.00110930 -0.00069303 -0.00069303 0.00469970 0.00469970 0.00875280 0.00083195 0.00083195 -0.57071000 -0.00110870 3.32890000 -0.00207840 -0.00207840 0.52083000 -0.00899060 -0.00899060 -0.00899060 0.00458000 -0.01587900 -0.01587900 -0.00304750 0.00319100 0.00000000 0.00000000 0.00152550 0.00152550 0.00000000 0.00000000 0.00000000 -0.00055444 -0.00055444 0.01056400 -0.53794000 0.00000000 0.00000000 0.00000000 -0.00069303 -0.00069303 -0.55417000 0.00469970 -0.54472000 -0.54472000 0.00083195 0.00083195 0.00083195 -0.01106000 -0.00110870 -0.00110870 -0.55707000 -0.57612000 -0.00207840 -0.00207840 0.00597000 -0.00899060 -0.00899060 0.52377000 -0.55146000 -0.57615000 -0.57615000 0.000 0.000 0.000 -0.545 0.000 0.000 0.000 0.000 -0.557 0.975 -0.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.545 0.000 0.000 0.000 0.000 -0.557 0.975 -0.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7309171 -1.2159149 4.8925367 10.6628281 12.2814885 6.6181652 11.0642016 8.9901216 9.0628319 1.7840014 11.4993294 10.6526483 3.6908975 5.0128279 0.7840014 8.4493468 4.0694100 9.0877917 11.4746636 10.5665996 9.7125292 0.3689359 7.2758638 10.4183681 7.2228026 5.3538667 -1.2159149 NA 10.7461838 6.3153923 7.0128290 7.4350626 5.9235628 10.4278264 10.2060757 3.7840118 8.2758638 NA 7.5751739 12.7906876 6.0786312 8.5136317 -0.2159149 -0.2159149 7.6073784 NA 4.1415636 NA 5.5521957 5.9448912 3.9132916 10.0116267 1.3689918 9.0425768 10.4138227 9.8944942 5.5784255 9.8098426 11.7983801 8.3670936 1.9539357 4.0694100 11.1101594 3.8714691 NA 1.1059462 3.0319421 14.2691147 5.6419910 8.2393379 13.2440187 10.1373727 10.1677152 13.5286870 15.4511917 8.9327415 10.7741148 13.0368980 11.0443423 8.9539360 8.4792391 0.7840014 7.9413575 10.6388792 10.848417 12.818466 8.053137 14.340693 9.315392 6.338599 9.528004 8.319286 10.391290 5.913294 8.342432 11.845551 6.435062 1.953936 10.447569 7.986134 5.164774 11.476626 10.383459 10.639658 9.280865 8.163389 11.328975 5.176327 9.587125 9.634979 10.515754 9.940726 11.878089 9.736752 10.808458 10.538898 8.882043 -1.215915 7.838344 6.720649 11.388332 5.087790 10.874123 7.480978 10.460849 9.977536 6.800820 14.596163 10.382529 10.220722 12.851109 10.164472 3.105946 1.105946 10.245490 9.363327 9.103683 TCGA-A2-A0SV 63 1 825 NA breast stage iv t2 n2a m1 female 2006 NA yes infiltrating ductal carcinoma 8 white not hispanic or latino 3 2 4 2 1 2 2 2 1 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 6.589149e-07 3.81477e-07 20 6.66666666666667 6.66666666666667 36.6666666666667 30 10.0505764 9.3269427 11.2017564 8.1417710 8.8654558 9.1702275 9.2112021 10.1807557 10.6332409 13.1958430 10.8678467 10.6750465 6.5668319 12.7224764 2.2577046 10.3136108 5.8355629 7.7074461 9.4199336 12.2672721 1.3401634 13.5865633 1.8706606 9.8098667 10.7403204 4.8284386 0.7552294 9.6224688 13.0096774 -0.8298185 8.7803295 6.6048556 NA 2.2577046 9.2988663 9.9171617 8.8470661 9.6874047 8.2550361 10.1388943 1.4921608 8.3148859 15.0532168 7.1226489 9.3821158 10.5601277 10.2790787 3.7248140 NA 8.8203816 9.9388255 0.1701815 10.1667010 6.8671947 6.3698992 5.7248167 9.4434403 11.6614543 11.4383309 11.2943488 12.2357278 6.9743584 10.4659965 9.6271313 10.4243704 10.3833318 3.8981503 11.4752918 8.6869126 -0.2448560 10.5340886 9.9670784 2.1943708 6.4370146 11.0436716 9.3269427 10.3426551 9.7329470 7.6540431 7.2708896 12.6287623 11.8140837 10.0616315 8.9775825 0.641390 1.239100 0.107160 0.109640 -0.204230 0.723380 -0.245090 -0.546330 2.849000 -0.556770 1.806000 0.090141 -0.573180 0.071248 0.071248 0.071248 0.000000 0.000000 -0.573000 -0.569120 -0.172210 -0.598080 0.089127 0.089127 0.052668 0.017404 -0.224900 3.656900 -0.249580 -0.222810 -0.106700 0.120380 -0.257000 -0.204230 0.055800 0.063795 -0.245090 -0.546330 -0.570830 0.083920 0.082909 -0.591460 -0.568330 -0.568330 0.083342 0.083342 -0.573180 -0.573180 0.071248 0.071248 0.071248 0.058428 0.000000 0.000000 -0.597500 -0.552560 -0.569120 -0.569120 -0.172210 0.104970 -0.598080 0.089127 -0.568830 0.052668 -0.224900 0.704760 -1.292900 -0.602160 0.027845 0.000 -0.573 0.000 0.000 0.000 0.000 -0.553 -0.569 -0.172 0.105 0.105 -0.598 0.000 0.000 -0.569 0.000 -0.225 -0.223 0.419 0.652 0.000 1.247 -0.589 -0.172 -0.172 0.110 0.110 -0.204 -0.204 0.000 0.000 -0.546 -0.546 0.000 0.000 1.220 1.811 -0.568 0.000 -0.022 -0.313 0.000 -0.573 0.000 0.000 0.000 0.000 -0.553 -0.569 -0.172 0.105 0.105 -0.598 0.000 0.000 -0.569 0.000 -0.225 -0.223 0.419 0.652 0.000 1.247 -0.589 -0.172 -0.172 0.110 0.110 -0.204 -0.204 0.000 0.000 -0.546 -0.546 0.000 0.000 1.220 1.811 -0.568 0.000 -0.022 -0.313 8.3918145 3.8426571 5.0405944 9.9767772 11.7439931 7.3690162 10.7429277 8.4698477 8.7043360 1.8706606 12.5692384 12.2061186 2.1702135 0.7552294 2.1702135 7.3551026 4.0031165 11.5247524 11.3185452 10.7388962 9.2180330 3.1702295 8.2282194 9.7636187 6.1758519 6.3148850 0.7552294 NA 11.0823684 3.7551867 5.8913268 8.4002480 6.2735159 9.9241755 10.2336227 -0.2448560 9.4387696 -1.8298185 7.1758519 11.6463408 8.4671437 7.3501365 NA 5.0771191 9.1120088 5.7775591 4.5796207 -1.8298185 4.6459610 2.5000627 0.1701815 11.2828300 NA 4.6937880 10.3464007 9.9379981 4.7995847 9.8567280 13.3887529 8.9317788 3.2995084 4.0528680 9.5598589 2.0771062 NA 0.9776096 3.3401492 12.416318 7.034414 8.447515 12.722476 9.312335 11.831560 12.267272 10.291113 9.535456 10.513136 13.289412 12.041074 8.820382 8.244369 1.340163 7.545267 11.936860 11.317432 11.545539 5.799585 13.354056 9.055924 5.147506 8.345153 9.720974 10.332062 7.034414 8.677031 10.867847 7.083117 NA 9.386973 5.579618 9.205906 10.644440 10.030927 10.023147 8.371126 10.035574 9.194675 5.257690 11.659798 8.847066 10.361904 10.164227 9.878880 9.822176 10.253707 10.563618 8.513413 1.492161 9.311626 7.643873 9.938825 3.455636 10.166701 7.401449 10.531897 9.443440 6.915062 13.385078 10.616277 10.722657 12.902289 11.087040 1.170246 NA 9.601725 9.254372 9.156069 TCGA-A2-A0SW 82 1 1365 NA breast stage iv t2 n2 m1 female 2006 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino 3 2 4 2 1 2 2 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.075072e-06 2.774378e-07 17.0731707317073 29.2682926829268 2.4390243902439 17.0731707317073 34.1463414634146 10.4525435 9.6748068 11.7417627 8.8571546 9.0711381 9.4820512 10.1551358 10.4611002 9.8761377 13.8482125 9.1479014 10.8808447 -0.1885290 10.3693372 1.9813047 9.5005193 5.6187496 9.0933249 9.7728447 12.5406970 NA 11.9570087 3.3349544 9.5350901 10.6615818 5.4696060 0.8113888 10.1601065 10.2957143 1.8113888 7.4767308 7.5222017 NA 8.0353968 9.1117476 10.4284032 8.8666774 10.1923970 9.5737771 11.3619012 2.2708279 10.3236416 14.9022103 9.4718187 9.8516847 10.5837096 9.8000797 2.9813230 NA 8.3659838 11.3638239 -0.1885290 11.0311685 5.6940388 7.2830698 5.8337630 9.4952668 11.9192658 10.1157462 11.4729504 12.7832977 5.6817585 10.7688598 10.1681110 10.9400338 11.3263555 4.3659864 11.4389288 10.1157462 NA 10.0851905 9.1523576 2.8826430 5.8882099 10.5222013 9.5031384 10.6859922 9.9061324 2.1333334 9.3935370 12.2338540 11.2173342 8.6631439 9.9074512 1.0136000 0.4961400 0.0062481 0.0114000 -0.0022168 0.5271300 -0.0136770 -0.0044630 0.5095000 0.5095000 0.5362600 0.5067100 -0.0250720 -0.0081624 0.5222300 0.5222300 -0.0030475 0.9870100 -0.5968000 0.5422400 -0.5437100 -0.5619600 -0.5619600 0.7092600 -0.0179410 -0.0179410 -0.0179410 1.0146000 0.2643500 0.2336500 -0.3594300 -0.5559700 -0.0022168 -0.0110590 -0.0056757 -0.0094046 -0.0136770 -0.0044630 -0.0069195 0.4980500 0.5283600 0.5095000 -0.5690200 -0.5690200 -0.0202870 -0.0099565 -0.0147780 -0.0205490 -0.0137240 -0.0110600 -0.0132640 -0.0146410 -0.0030475 0.5032500 -0.0369460 -0.5377400 0.0050795 -0.5550700 -0.5728900 0.0917350 -0.5619600 -0.5619600 -0.0283550 -0.0364010 -0.0179410 0.5281800 0.0054139 -0.5710100 0.0079175 0.507 0.000 0.000 0.000 0.000 0.490 -0.538 0.000 -0.550 0.559 0.559 -0.562 -0.562 0.000 0.000 0.000 0.000 0.263 1.014 0.520 1.015 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.504 0.000 0.000 0.000 0.528 0.528 0.510 0.510 -0.549 0.000 0.134 0.404 0.507 0.000 0.000 0.000 0.000 0.490 -0.538 0.000 -0.550 0.559 0.559 -0.562 -0.562 0.000 0.000 0.000 0.000 0.263 1.014 0.520 1.015 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.504 0.000 0.000 0.000 0.528 0.528 0.510 0.510 -0.549 0.000 0.134 0.404 7.3888241 3.6693783 4.4552483 10.2053216 12.1272521 7.2088557 10.8455060 9.2037447 8.7653876 1.1333005 11.8154398 13.0249290 6.2952106 1.3963787 2.7182849 7.5528620 4.3032474 12.0856275 11.6173403 10.5524405 9.3172066 NA 9.1918560 10.2213162 8.7107517 6.8337630 2.9813230 -1.1886934 10.8064554 5.9199192 8.2058577 8.4187250 4.5393139 10.0022197 10.3549102 3.6187555 9.1140338 NA 6.9913041 12.1019898 8.2271365 7.9483859 NA 1.6187555 8.2418473 NA 4.3032474 NA 7.3774492 2.7221381 4.9406789 11.1969877 0.8113888 8.9251372 10.8619238 9.8747901 6.1060153 11.2444587 13.6297275 8.6615818 6.4407513 5.1333210 10.5712831 3.0593207 NA NA 2.7182849 11.962191 6.403852 9.146785 10.369337 10.096179 11.236873 12.540697 10.059322 9.421091 10.170595 12.856131 8.522201 8.365984 7.448020 3.203718 7.721288 10.957645 10.4584035 12.6143151 7.9962701 14.0087245 9.2533017 7.8828570 5.2207865 7.9458213 10.4514636 7.7684967 7.0545685 9.1479014 8.4425720 -1.1886934 10.1282421 4.6187496 8.9012558 10.3236416 10.6086512 10.1896898 8.1534694 8.9146826 9.4722822 9.9894372 11.6114859 8.8666774 11.1601231 9.8747901 10.3515230 9.9869445 9.1355754 10.7854510 8.5528620 0.3963787 9.7478120 7.8254155 11.3638239 10.4001095 11.0311685 7.4767308 10.5692016 9.4952668 8.0995456 13.5075475 10.8693866 10.8053948 11.7423170 10.9319568 2.8988662 1.6187555 10.2063934 9.3944777 9.1645417 TCGA-A2-A0SX 48 0 NA 1534 breast stage ia t1c n0 (i-) m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 3 4 4 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.242351e-07 1.387189e-07 13.0434782608696 39.1304347826087 0 13.0434782608696 34.7826086956522 10.3327746 10.1148657 12.1375613 10.1111005 8.2484518 9.3399415 10.1157011 10.7400678 11.2669941 12.5444787 11.3939656 10.9928629 2.1685779 12.0402713 4.0336521 9.8041746 7.0616704 8.5803995 10.7275533 8.3499159 2.5311444 9.6500971 9.7790835 9.7744041 10.9336944 3.7187781 0.9462068 10.5755502 10.6655824 2.7535404 9.0668634 8.2469272 5.2560482 6.3154268 10.0481693 10.7476324 9.2261911 10.7814545 9.5858357 11.8969924 0.9462068 9.0005719 15.0947363 8.3646083 9.1244269 11.2298607 11.1182043 3.9158172 -1.6389054 10.0801920 10.2323662 2.1685779 11.4325258 6.1026980 8.1111007 7.2860439 9.4599211 12.0335459 10.2438741 11.5808534 13.2465461 7.3555846 11.0290079 10.5742107 11.7586383 12.0241219 4.8369643 11.9635820 9.2277372 NA 10.1409504 9.5761572 4.0815101 6.5160498 12.1610186 10.6952249 10.3302578 9.9643937 4.4056248 6.4486945 13.8889219 12.0046363 9.7220781 10.0154195 0.583920 1.397900 -0.420390 1.308000 -0.403890 -0.300000 0.024918 0.048920 -0.262920 -0.262920 0.382640 0.146910 0.146910 -0.181030 -0.120090 -0.120090 0.023335 0.000000 0.174470 -0.154560 -0.419630 -0.122690 -0.118820 -0.116960 0.639680 1.534600 0.065460 0.728040 0.106960 0.011907 0.154540 -0.421710 0.425470 -0.329290 -0.588760 -0.287550 0.024918 0.048920 0.018752 -0.459540 0.148100 -0.489380 0.468210 0.488480 -0.124650 -0.124650 0.146910 0.137300 -0.263300 -0.155660 -0.445490 -0.445490 0.023335 0.000000 0.000000 0.089798 -0.154560 -0.154560 -0.093716 -0.092262 -0.122690 -0.118820 -0.402560 -0.574500 -0.523470 0.148850 0.102290 -0.402560 -0.430000 0.147 0.147 -0.181 -0.181 0.000 0.000 0.000 -0.155 -0.420 -0.358 0.000 -0.123 -0.123 -0.403 -0.403 1.389 1.389 0.000 0.572 0.149 0.149 0.000 -0.403 0.154 0.154 0.178 0.178 0.000 -0.404 -0.285 -0.285 0.000 0.000 -0.452 -0.452 -0.125 0.365 0.344 -0.125 0.000 0.000 0.147 0.147 -0.181 -0.181 0.000 0.000 0.000 -0.155 -0.420 -0.358 0.000 -0.123 -0.123 -0.403 -0.403 1.389 1.389 0.000 0.572 0.149 0.149 0.000 -0.403 0.154 0.154 0.178 0.178 0.000 -0.404 -0.285 -0.285 0.000 0.000 -0.452 -0.452 -0.125 0.365 0.344 -0.125 0.000 0.000 7.0512285 NA 5.5900510 10.7351838 11.6493762 5.5704903 10.8568363 10.0109139 9.6603188 0.6832024 11.9327467 11.1793239 4.4905124 3.4486896 4.1685859 9.6321104 4.7362693 11.2679338 11.4097179 10.8041745 9.1693909 5.6831603 8.7906378 10.2446381 8.5046144 7.6809031 3.6466350 0.6832024 10.6203858 4.2192150 8.8308729 8.7319184 10.6746810 10.3959063 11.3208708 4.1425932 8.8308729 -1.6389054 8.4205755 12.4444611 8.4853524 6.7231749 NA 3.9158172 7.9611440 6.5948501 3.9158172 -0.6386808 8.1393083 4.0359142 8.1798131 11.2029919 2.8206691 10.6558518 10.8191249 10.0904269 8.2860434 10.5697703 14.2984899 9.0380696 5.0616725 5.1161194 9.8430305 1.5311693 NA -1.6389054 3.6091640 13.144691 9.095094 7.789591 12.040271 10.571598 11.241006 8.349916 11.083398 9.159703 11.429673 14.334233 11.693687 10.080192 8.212980 2.168578 7.689906 11.333672 10.9480708 11.4513435 5.2067214 13.9892473 9.0976329 8.3682585 9.7843469 8.9978558 10.6381638 8.5559879 6.9869399 11.3939656 10.9461935 2.4486896 11.1540214 6.1621315 9.3457634 13.5646555 10.8031377 10.3531071 8.4956572 8.6055947 9.5633549 9.2215422 10.7371801 9.2261911 10.4553087 9.7556938 12.7805988 12.8887081 11.3905183 10.9515842 8.8145017 0.6832024 9.4472942 7.6798643 10.2323662 10.0547180 11.4325258 7.5135160 10.7852949 9.4599211 8.0426274 14.1082174 10.5358447 10.0555890 12.8130217 11.0711764 6.3442249 1.8206487 10.7511312 9.9100529 9.7313735 TCGA-A2-A0SY 62 0 NA 1347 breast stage iiia t3 n1 m0 female 2007 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino 2 2 3 2 NA NA 4 4 3 6 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 4 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.155855e-06 1.005712e-06 13.3333333333333 66.6666666666667 0.833333333333333 11.6666666666667 7.5 9.61722115 9.48106095 12.06167931 8.98376832 8.91461953 9.21281200 10.64856116 9.92603249 9.92964500 10.21830797 11.80832515 10.68565839 1.28628976 14.65108373 3.52334867 9.94094017 5.23383822 8.18975588 11.19833809 13.59841730 1.64887955 13.69300271 4.92189329 8.16166300 10.70896970 5.03353753 NA 11.75750181 9.22041630 2.72687480 8.61080635 7.31815322 NA 4.68840419 9.92861386 10.31183923 9.64322776 12.45452858 10.09825216 11.28408851 9.62679009 11.40820765 14.87202124 8.42251895 10.44653581 10.59691698 11.04286051 4.83649983 3.68840419 8.77701197 12.20261022 NA 11.24609920 6.13716125 6.71735427 4.97080305 10.64887425 12.40004634 10.74133780 12.51546634 12.71600981 7.94042871 11.01422465 10.79106641 11.50010277 11.01227898 4.93837990 12.08454453 12.90998975 0.06391705 10.33498563 9.03641294 3.35325271 6.28630455 10.58158117 10.24340620 10.28992251 9.54167009 5.26030799 9.70114043 13.71047047 12.40459641 10.21111675 9.83374968 0.62715000 0.63536000 0.00000000 -0.01230000 -0.01050800 0.01922200 0.00416320 -0.01009400 0.00930980 0.00930980 -0.00923240 0.01307400 0.01000600 0.00638710 0.00638710 0.00638710 -0.00650500 -0.00650500 -0.00193990 0.00263570 0.02146300 0.70326000 2.86080000 0.00597000 0.01153900 0.01153900 0.00968780 0.02482900 0.02988800 -0.00588030 -0.00373950 0.00000000 -0.01050800 -0.01050800 -0.01409000 -0.01409000 0.00416320 -0.01009400 -0.01009400 -0.00456950 -0.00526100 0.00930980 -0.00013862 -0.00013862 -0.00013862 0.00652620 0.01000600 0.01000600 0.00638710 0.00638710 -0.67948000 -0.67948000 -0.00650500 0.00249690 0.00249690 -0.00193990 0.00263570 0.00805670 0.01684500 -0.66541000 -0.66504000 -0.65594000 -0.70603000 0.01153900 0.01153900 0.02482900 0.00841310 0.01488800 0.03647000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.665 -0.665 0.000 0.000 0.000 0.000 0.000 0.000 0.627 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.665 -0.665 0.000 0.000 0.000 0.000 0.000 0.000 0.627 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.26030893 7.13000109 5.17938764 11.04856759 11.02897449 8.06691420 11.87996206 9.22707510 8.32276056 3.76435677 11.30251555 10.79402801 3.12280522 4.33693317 1.80086885 7.60048311 3.97079845 10.52947819 11.29152770 10.63186786 9.19662573 3.47894593 7.31815322 10.35393061 8.13716074 8.45765954 NA NA 11.11262566 8.23383678 8.15314158 7.77815731 5.84527175 10.50461136 10.12775617 5.29912741 8.62996563 NA 8.14606100 13.75481913 7.57961161 7.57961161 -1.52118347 2.93837990 8.32757240 NA 4.98674313 3.28630455 6.63376685 6.84527175 3.87126212 10.35891532 NA 8.71615925 10.38771720 10.08396577 5.49017539 9.92241091 12.51434978 9.61594039 3.87126212 4.56641333 12.10214491 0.06391705 2.56640116 -1.52118347 5.61850003 13.386779 4.938380 8.447616 14.651084 10.316037 10.686879 13.598417 12.235818 9.169820 10.629649 13.197857 11.194053 8.777012 9.220416 2.063917 7.048805 10.615940 11.21809699 12.33809575 7.18630840 13.82708747 8.77357014 6.71735427 8.96276503 7.59786410 10.50034228 7.75739868 7.71974064 11.80832515 7.04500276 0.47892005 10.60048274 6.91357759 7.01709903 10.65325084 10.25332455 10.73663176 7.71017068 8.30708557 11.98884794 6.61337547 11.14166212 9.64322776 10.54167000 9.84308392 10.94502575 9.58943262 10.79579641 10.43387260 8.60307067 0.06391705 8.84851403 8.48816189 12.20261022 8.63503243 11.24609920 6.59269174 10.48991086 10.64887425 7.10465850 15.07222366 10.19104626 10.20346314 12.33644435 11.05708603 8.45765954 3.80087920 10.25702642 10.09825216 8.86911816 TCGA-A2-A0T0 59 0 NA 533 breast stage iib t2 n1 m0 female 2009 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 3 3 4 4 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.022849e-06 1.005712e-06 7.38255033557047 22.1476510067114 2.68456375838926 36.241610738255 31.5436241610738 10.18666199 9.15922803 10.71495982 8.53104648 8.78789146 8.83316018 9.56264426 10.39619203 11.69755982 12.84849511 9.92889066 10.74419053 -0.02488345 11.73908314 3.09065022 9.01043663 5.80806836 9.61301165 8.73673035 8.93807521 -0.02488345 12.19716901 6.56014174 9.08232657 10.41501010 5.03407482 -0.60977256 11.34985642 11.29560371 1.56012798 9.80648647 7.06969680 0.39022744 3.03407482 8.39162468 9.36678074 9.53932867 11.04530010 9.93179739 10.72783862 0.71211150 7.63814409 14.80303458 6.51314803 9.73284697 11.18137958 10.41327790 3.03407482 3.59967485 9.08892124 10.71552217 6.09065657 9.38810191 3.51950416 5.87403214 4.41258509 10.18463252 12.30963869 10.16500369 10.87705172 12.43264556 7.09411992 11.08021468 10.76974670 10.84913585 10.02048387 3.39021368 11.28162065 7.48824907 2.47767733 10.06440893 9.13840953 2.73576044 3.14510678 11.47784527 10.73949786 11.01820644 9.57385203 2.39022744 6.49350484 12.48429437 12.04853977 8.99754702 9.62802406 0.50168000 0.77868000 0.01028500 -0.02205800 -0.00387790 0.02806000 0.72263000 0.52853000 -0.00484610 -0.00484610 1.48410000 0.99509000 -0.55717000 0.50099000 0.00083195 -0.00526100 -0.55367000 0.55904000 0.47959000 0.03157700 -0.54875000 0.00249690 0.00249690 0.71340000 0.47152000 -0.00415460 0.20661000 0.01391100 -0.56634000 -0.55967000 -0.00774820 -0.53987000 0.00194180 -0.58235000 0.01459700 -0.57130000 -0.56396000 -0.02109800 -0.57704000 0.02974700 0.00000000 -0.56619000 -0.55607000 -0.55607000 0.01936300 -0.58706000 -0.86192000 -0.57911000 -0.61949000 0.00083195 -0.00526100 -0.00526100 -0.55367000 -0.55595000 -0.54784000 -0.04888300 -0.55587000 -0.06410600 -0.03608600 -0.56753000 0.06436800 0.00249690 0.00972760 -0.04820700 0.20661000 0.01106400 -0.00318590 -0.07401000 0.39330000 0.000 -0.555 0.000 0.000 -0.556 -0.556 0.000 0.000 -0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.798 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.558 0.425 -0.556 0.000 -0.316 -0.316 0.000 -0.555 0.000 0.000 -0.556 -0.556 0.000 0.000 -0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.798 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.558 0.425 -0.556 0.000 -0.316 -0.316 7.31799500 NA 4.63814336 10.06881683 12.37596969 6.22689767 11.12788653 7.30031961 8.11813699 NA 14.10558886 11.13170265 5.53996525 NA 2.71215553 9.16582704 2.47767733 10.62023715 11.18300700 10.38386270 8.84657104 -0.02488345 8.80384471 9.45428572 5.01957294 5.87403214 NA -0.60977256 11.27495960 -1.60999274 5.32095395 9.13924795 7.63814409 9.40140904 10.09022280 -1.60999274 9.51304477 0.97518994 8.66051189 12.69328389 7.53996370 10.18178660 -0.02488345 1.84963904 8.99384303 0.39022744 2.29710336 NA 3.84964905 4.90133516 1.56012798 10.85654808 2.63814336 6.47767895 10.90936150 9.98500781 6.12492569 9.75981397 11.89279988 7.64760449 3.24820084 4.11813543 10.74115583 3.51950416 6.00492605 3.97518076 7.90985289 11.656620 8.178119 8.672147 11.739083 10.211604 12.205300 8.938075 10.009061 9.494160 9.754351 13.076279 13.280101 9.088921 8.980804 2.849639 8.298609 11.543769 11.066394 12.893048 2.913780 13.949175 8.465696 8.104462 8.675619 8.956271 9.440181 6.138409 3.913780 9.928891 5.944805 3.638143 10.378191 7.300110 7.767622 11.645983 10.565454 10.184226 8.277437 9.454286 8.050213 4.833158 10.591560 9.539329 9.720013 10.603321 9.940482 11.247809 8.095849 10.738392 9.070576 2.477677 9.510720 6.254403 10.715522 4.456307 9.388102 7.121536 10.256336 10.184633 7.730067 13.730901 10.067055 10.699977 12.454538 11.291649 -1.609993 3.090650 10.496452 9.800138 9.264430 TCGA-A2-A0T1 55 0 NA 521 breast stage iiic t3 n3 m0 female 2009 NA yes infiltrating ductal carcinoma 10 american indian or alaska native not hispanic or latino 3 2 4 3 6 1 2 6 4 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.080784e-07 1.733986e-07 27.2727272727273 9.09090909090909 0 27.2727272727273 36.3636363636364 9.807181 9.467350 11.466013 8.761844 8.295706 9.480268 10.474203 9.700173 11.410125 12.559922 9.898895 10.335560 1.905120 17.180843 3.627572 9.868581 2.670636 8.349708 4.465824 12.156708 2.670636 11.627744 8.246737 9.514884 11.112122 7.528623 1.753091 12.986669 9.909609 2.168129 8.869737 7.602770 NA 7.034391 9.715036 10.664663 9.468113 9.493822 9.483291 11.102078 2.168129 9.220710 15.556103 6.251922 9.542457 11.023529 10.134407 4.042609 6.050785 8.695619 10.680882 -1.416962 10.534464 5.670642 7.459696 6.168143 9.524960 11.240051 9.536648 11.712301 12.563854 7.075032 10.837322 9.893792 10.659327 10.745885 3.338068 11.315983 9.398562 1.390558 10.573992 9.784690 2.754717 6.304279 11.135128 9.551126 9.759352 11.009444 2.670636 10.433366 12.495320 11.492135 9.471922 9.141600 -0.0556340 0.1640000 0.0708870 0.1717400 3.5601000 0.1134500 -0.0084385 -0.0089906 -0.3888400 -0.3848100 0.5958400 0.1293300 0.1293300 0.1630900 0.1630900 0.1630900 -0.0103390 -0.0078863 0.0221640 -0.0089906 0.0049969 -0.1026300 3.6569000 0.0892720 0.0659420 0.0659420 0.0659420 0.0983110 -0.0556340 -0.0556340 -0.0029091 0.0398350 -0.1941200 -0.1829500 -0.1172900 -0.0045695 -0.0084385 -0.0089906 -0.0089906 0.3543000 0.3508800 -0.3859000 0.1685000 0.1561500 -0.1899000 0.1670000 0.1293300 0.1293300 0.0000000 0.1630900 -0.1907400 -0.1818100 -0.0103390 -0.0078863 -0.0118370 0.0221640 -0.0052610 -0.0103700 0.0049969 -0.1932500 -0.1026300 0.0892720 -0.0116110 0.0659420 0.0659420 0.0983110 0.7750200 0.2415600 0.2415600 0.129 0.129 -0.028 -0.191 0.000 0.000 0.000 0.000 0.000 0.180 -0.014 0.089 0.192 0.000 0.000 0.000 0.000 0.000 0.270 0.000 0.000 0.206 0.242 0.130 0.000 0.000 0.132 -0.193 -0.193 -0.117 -0.117 0.000 0.000 0.354 0.000 -0.394 1.081 0.000 0.000 0.318 0.000 0.129 0.129 -0.028 -0.191 0.000 0.000 0.000 0.000 0.000 0.180 -0.014 0.089 0.192 0.000 0.000 0.000 0.000 0.000 0.270 0.000 0.000 0.206 0.242 0.130 0.000 0.000 0.132 -0.193 -0.193 -0.117 -0.117 0.000 0.000 0.354 0.000 -0.394 1.081 0.000 0.000 0.318 0.000 8.3579663 NA 7.2378151 10.8823872 12.3031027 6.5405713 10.8700257 9.8226882 9.2107588 2.0426093 12.3384841 11.5278144 2.9051005 -1.4169624 4.3645374 7.9754966 5.0261228 11.9872563 11.5944064 10.0904783 9.0230099 2.1681285 7.4033581 10.3038509 8.4703998 7.5916076 2.2836255 -1.4169624 10.7461998 4.1681446 6.7329258 8.9073597 7.3076926 10.4342840 9.7284745 4.3110962 9.3178888 0.1681285 7.0669954 13.0755957 8.0487457 8.6812114 0.1681285 7.8755006 7.9495017 0.5831339 3.7531017 NA 7.6969216 2.5139202 5.0261228 11.6143634 NA 8.3397356 10.2635387 9.8812417 6.8358445 10.4255295 13.9283072 9.1135854 4.9582163 5.3775958 9.8645297 4.1067419 -1.4169624 0.5831339 2.5831821 10.658053 5.338068 10.461230 17.180843 9.657321 10.584235 12.156708 9.064978 9.392143 10.051803 12.646153 9.283619 8.695619 7.886960 4.390537 7.034391 10.872910 11.824716 13.080719 4.583182 13.243450 8.792633 8.173766 8.807181 8.786809 10.849837 8.416069 6.831107 9.898895 6.882387 1.583182 10.103798 9.207061 7.438235 12.278299 10.901157 10.569021 7.393751 9.834662 9.038506 9.245848 10.750754 9.468113 10.314498 10.277972 10.652629 10.556159 9.558311 10.914936 8.537376 6.873198 9.674714 7.651232 10.680882 9.257371 10.534464 6.831107 12.092954 9.524960 7.022179 13.623555 10.599987 10.241837 12.220823 10.615914 3.975493 2.042609 9.645225 9.519817 9.600684 TCGA-A2-A0T2 66 1 255 NA breast stage iv t3 n3 m1 female 2009 NA no infiltrating ductal carcinoma 10 white not hispanic or latino 3 3 4 4 1 1 5 5 2 7 NA NA 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 4.855162e-07 2.774378e-07 30.4347826086957 13.0434782608696 4.34782608695652 21.7391304347826 30.4347826086957 10.3737292 8.5539591 11.7463369 7.8485910 8.8132810 8.1744204 9.0931365 9.8548559 11.7498896 13.0165767 9.6491529 9.8492883 1.6419159 11.9031807 1.6419159 11.4916655 7.9843176 8.7519423 7.5522472 3.3581290 NA 11.9388415 10.2681559 10.5342773 10.5276217 7.9689968 0.4195389 9.0693877 11.2410412 2.5350078 8.9060328 7.6987567 NA 2.9220265 8.3163698 9.3561709 9.1621229 10.6253261 8.4326229 11.2993713 3.4195389 3.4784283 14.8569382 6.1848020 10.3374021 10.5641911 9.4520377 3.2940031 NA 8.9919172 11.2650229 -0.1653697 8.9233587 5.1383517 6.3423645 4.2940031 9.1257410 11.5195381 9.9925488 11.3244183 11.9215359 6.8118499 11.7998135 10.9130548 10.1649270 10.6547493 3.6925499 11.8186327 8.6658777 NA 10.5505324 8.8789644 3.7429009 3.6419275 11.0320942 9.3669263 9.9535114 9.5768798 2.2939884 8.6894386 13.0326317 13.3850166 9.9140551 10.4954576 2.7996000 -0.0317680 -0.0257560 1.2730000 0.0000000 -0.1185900 1.2526000 1.2526000 1.2456000 1.2456000 1.2456000 3.3495000 1.2161000 1.2254000 -0.0418320 -0.0418320 -0.6627200 -0.0027707 -0.0197260 -0.0290380 1.1481000 -0.0415670 -0.0415670 -0.0415670 -0.0276710 1.2210000 1.1672000 1.1839000 1.0960000 1.1117000 -0.0086026 -0.0217840 -0.0770780 0.0000000 -0.0210980 -0.0210980 1.2526000 1.2526000 1.2535000 1.2257000 1.2504000 1.1495000 1.2125000 1.2237000 -0.0305400 -0.0456840 -0.0373540 1.1868000 1.2254000 -0.0418320 -0.0399370 -0.0399370 -0.0321760 -0.0053176 -0.0463690 0.0072217 -0.0290380 -0.0258930 -0.0614200 -0.0903590 -0.0415670 -0.0415670 1.1807000 -0.0257560 1.2210000 1.1932000 2.0158000 -0.0748110 -0.0748110 2.216 0.000 1.225 0.000 0.000 0.000 0.000 0.000 1.182 1.181 0.000 0.000 0.000 1.165 1.165 0.000 1.167 0.000 0.000 1.193 0.000 2.016 0.000 1.231 0.000 1.266 1.266 0.000 0.000 0.000 0.000 1.253 1.253 1.221 1.221 1.246 1.246 1.208 1.208 0.501 0.501 2.216 0.000 1.225 0.000 0.000 0.000 0.000 0.000 1.182 1.181 0.000 0.000 0.000 1.165 1.165 0.000 1.167 0.000 0.000 1.193 0.000 2.016 0.000 1.231 0.000 1.266 1.266 0.000 0.000 0.000 0.000 1.253 1.253 1.221 1.221 1.246 1.246 1.208 1.208 0.501 0.501 8.8089851 NA 5.6419246 11.0041823 11.7074376 5.9464361 11.0854609 9.1109624 9.1366267 -1.1655315 11.3246691 12.2049772 5.3264223 NA 4.6419275 9.2991162 3.3581290 9.8380883 11.1426249 11.0585721 9.8741750 0.4195389 9.2785498 10.2198936 6.0824982 9.5122901 4.3581290 NA 10.9625647 -0.1653697 5.1199745 7.8204126 8.6563444 9.7673388 11.0348560 0.8345494 9.1485872 1.1565261 6.2691978 12.3011567 7.9638532 10.5228207 -0.1653697 2.2939884 7.2268880 5.8679928 4.7414616 0.8345494 4.9220313 1.8345899 2.8345696 11.5215086 2.4195389 9.8387909 10.7365686 10.3867591 4.7887692 9.6650856 11.0910739 7.4307603 2.7414670 3.6925499 10.7865835 1.4195389 3.9638532 2.2939884 6.9430950 10.6019148 8.6515540 8.1406319 11.9031807 9.8039569 10.5718178 3.3581290 10.1036971 8.7712082 9.9286481 13.4128841 9.7110874 8.9919172 7.5726623 0.8345494 7.0729751 11.1423404 10.482029 11.732983 4.192123 14.705412 9.451119 5.492783 8.560789 7.029327 9.414263 5.342366 7.478427 9.649153 10.380983 NA 10.258737 9.463016 7.850543 11.343603 9.961275 10.599027 7.554438 9.659529 7.396813 3.741456 10.454231 9.162123 10.218814 10.199799 11.546882 10.531538 11.218545 10.430760 7.932602 -1.165531 8.476586 6.243962 11.265023 3.641927 8.923359 4.922031 10.134923 9.125741 7.702189 15.024877 11.013857 9.621657 11.953998 10.622473 -1.165531 NA 11.170519 9.914055 8.289898 TCGA-A2-A0T3 37 0 NA 1516 breast stage ib t1c n1mi m0 female 2009 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 1 1 1 NA 4 3 1 4 5 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 3.467973e-07 19.3548387096774 12.9032258064516 6.45161290322581 51.6129032258064 9.67741935483871 10.4558252 9.9135631 12.0014109 9.3255587 8.9658971 8.7175750 10.9119260 10.4991489 9.6696621 14.0677677 11.7812163 10.8662808 2.4094996 12.6290281 2.9070060 8.8937936 7.4894586 9.0337077 8.5770692 12.5578307 NA 13.2549937 3.9658951 9.4532418 11.4852188 6.0635073 0.3220435 9.2907075 12.0407877 2.5699771 8.4590320 7.2762370 0.3220435 3.7483002 9.7778817 10.6801425 9.6529577 10.2733255 10.1091272 11.5892664 3.4919685 11.8362617 14.2924613 8.4939307 9.2549936 11.8029572 10.8945042 5.5508607 6.0769289 9.0827609 11.6578498 -1.6780719 10.8730280 4.0224832 5.2645552 3.8766250 10.3437148 12.1060621 9.7367261 12.4184266 12.9029471 7.4666989 10.8458478 10.8156436 11.4830152 11.4317082 4.9658951 11.5511600 10.6754634 -1.6780719 9.8861903 9.7148949 3.3224906 3.4094996 8.7143582 10.3877935 11.0735849 10.7814724 1.4919557 10.6638375 12.9177062 13.0347290 9.6773920 9.3691648 0.6441400 0.5983600 -0.3513300 0.3210900 1.4653000 0.3448600 -0.3586300 -0.3411300 2.8821000 0.6198800 1.2659000 0.5670300 -0.3484700 0.9119800 3.6569000 -0.3775200 -0.0256200 -0.0249350 0.0183830 2.1119000 -0.0412100 -0.1141700 0.4602400 1.8520000 0.3933000 0.5547800 1.4281000 1.9870000 -0.0254830 -0.0254830 -0.0711530 -0.3513300 -0.7958600 1.4576000 -0.0332690 -0.0332690 -0.3586300 -0.3411300 -0.3803300 -0.7021700 0.9277200 -0.7602100 0.6443300 -0.0444150 0.5827400 0.5708500 -0.3484700 -0.3493900 0.9119800 -0.4512500 -0.3775200 -0.3775200 -0.0256200 -0.0249350 -0.0249350 0.0183830 0.5807700 0.5807700 -0.7313400 -0.0818710 -0.1141700 -0.2162700 -0.0059522 -0.2511600 1.4281000 -0.3740300 0.5661400 0.4966600 -0.1101100 0.531 -0.348 0.534 -0.378 0.000 0.000 0.000 0.581 0.000 0.541 0.000 -0.114 0.842 0.000 0.000 -0.205 1.163 0.000 0.644 0.000 0.000 0.566 -0.110 0.000 0.000 -0.030 0.321 0.000 1.462 0.000 0.000 -0.341 -0.341 -0.330 -0.330 -0.725 0.620 0.583 0.583 0.181 0.181 0.531 -0.348 0.534 -0.378 0.000 0.000 0.000 0.581 0.000 0.541 0.000 -0.114 0.842 0.000 0.000 -0.205 1.163 0.000 0.644 0.000 0.000 0.566 -0.110 0.000 0.000 -0.030 0.321 0.000 1.462 0.000 0.000 -0.341 -0.341 -0.330 -0.330 -0.725 0.620 0.583 0.583 0.181 0.181 8.0635078 -1.6780719 5.3988565 9.9404264 12.5008612 5.9776074 10.1690981 8.7475609 8.4374878 0.3220435 10.8138939 10.9649139 11.2939436 4.1033969 3.9367510 8.7649843 3.1293984 8.5106297 12.3755425 10.7316969 9.6696621 2.2289418 7.8436410 8.6439691 5.6439687 4.9513966 5.0499618 1.6439485 10.5445339 5.3220399 7.0224810 8.2747821 5.3220399 10.3072139 10.6439689 2.6439716 9.8168965 -0.6780719 8.2198863 12.1574004 7.2849370 7.2498189 -0.6780719 4.1033969 7.3050348 -0.6780719 3.0769353 1.1294149 4.0769267 2.2375637 2.0224743 10.3506376 -1.6780719 8.2907078 10.2704081 9.6434053 4.5508576 8.8795045 11.9653333 6.7398940 2.4094996 3.1293984 11.1140177 2.5699771 NA -1.6780719 1.3220435 15.723540 7.648470 9.358901 12.629028 10.330329 10.513100 12.557831 11.222530 8.556858 10.917065 12.743317 11.782113 9.082761 6.990925 1.781486 8.692728 11.884641 11.541058 11.768866 6.813894 13.075777 8.771189 8.602812 8.714358 9.773767 10.696453 5.076927 10.673532 11.781216 7.960477 1.322044 10.622965 6.440982 8.543096 12.840817 9.708981 11.426640 10.854884 9.627533 11.585163 4.625820 11.360984 9.652958 10.760833 9.997557 10.148192 9.569375 10.848785 11.334142 8.937670 1.129415 9.251469 6.849518 11.657850 4.531494 10.873028 7.066875 10.887619 10.343715 8.005141 13.318470 10.070234 9.794732 13.042873 10.910521 2.643972 1.491956 10.407845 10.650996 10.287104 TCGA-A2-A0T4 62 0 NA 624 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 2 2 4 3 1 4 3 4 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 6.242351e-07 2.427581e-07 19.2307692307692 11.5384615384615 7.69230769230769 42.3076923076923 19.2307692307692 9.3466230 9.6689835 11.2136006 8.8011305 8.6410369 9.4142286 8.7692111 9.6818995 9.9874478 10.7586834 11.4669172 10.3082658 2.8719619 12.9981588 3.8230564 10.3121477 7.1745333 8.4142286 6.7266310 12.5674309 0.5500141 13.9038326 5.2130089 9.3372267 10.4337040 5.0311702 0.9651009 10.6206107 9.7107543 4.6375059 7.6724395 7.0418957 NA 4.3226348 9.4286043 10.2870081 9.6507048 10.9039245 9.0108397 10.6989428 2.2869994 9.8484870 14.5271137 6.9696375 9.5714853 10.8947083 11.0200234 4.7464418 5.6655207 9.1487153 10.8319725 NA 11.2274685 5.7724347 6.1449885 5.1745343 10.0108397 11.9617300 10.4357389 11.7782600 12.5956884 8.7594958 10.6676856 10.1604522 11.3718165 10.1920942 3.9650824 11.8867350 11.8166339 0.9651009 10.5330361 8.7132727 2.6666203 5.8958164 10.3876705 9.9337469 9.8980330 9.6480746 4.1745343 8.4925570 12.6509238 11.9516332 10.1052707 9.5187094 0.51385000 0.51385000 0.00722170 0.00467060 0.00055459 0.00624810 -0.51074000 -0.51146000 0.00423470 0.00423470 0.00423470 0.00610900 0.00610900 -0.00581400 3.65690000 3.65690000 0.00000000 0.00000000 0.01014600 -0.01285100 -0.01945200 0.01173300 0.01173300 0.01028500 -0.00316750 -0.00221680 -0.00221680 0.01476800 -0.50266000 -0.50266000 -0.00443120 0.00722170 0.00055459 0.00055459 0.00624810 0.00624810 -0.51074000 0.05779600 -0.51280000 -0.00041585 -0.00041585 0.00423470 0.01195800 0.01195800 -0.00375430 0.00680440 0.00610900 0.00610900 0.08189900 -0.49788000 -0.50173000 -0.50173000 0.00000000 0.00000000 0.00000000 -0.50318000 -0.00721940 -0.00721940 -0.02971500 -0.50380000 -0.50277000 0.01173300 -0.49830000 -0.00316750 -0.00221680 0.04755200 0.01126100 -0.22601000 -0.22392000 0.000 0.000 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 -0.504 -0.503 0.000 -0.498 -0.498 0.000 0.000 -0.503 0.514 0.000 0.000 0.000 -0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.488 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 -0.504 -0.503 0.000 -0.498 -0.498 0.000 0.000 -0.503 0.514 0.000 0.000 0.000 -0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.488 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.72163617 2.87196190 6.19389788 10.54863294 11.27881334 6.92814999 10.71578700 9.62753480 8.84619398 6.73326485 12.31463771 11.50034083 3.28701418 5.50423901 2.77243467 7.93662381 4.21300504 11.03721260 10.74233529 10.88580503 9.43979993 4.00947259 7.57610487 9.97350868 7.01492878 9.86443689 2.28699940 NA 10.60170459 7.54628022 7.42451149 8.58896156 6.47287439 9.90523942 10.00742343 5.03117020 8.90465931 NA 7.38293263 12.53160979 7.40387184 8.13249819 NA 5.55004181 8.44889600 0.96510086 4.48864354 NA 6.18424855 5.66552068 3.87197175 10.50714459 -0.03489914 8.57610487 9.82306099 10.20467849 5.71996647 9.69894267 13.18832757 9.11863200 3.96508239 4.82306147 11.86783196 3.21300504 -1.03504695 0.55001409 2.96508239 14.3174656 6.5119740 8.3638238 12.9981588 10.3345302 11.1739240 12.5674309 10.4654240 11.2118206 10.6542044 13.2909476 11.4576843 9.1487153 8.7497149 0.5500141 7.1148272 11.0482269 11.299912 12.150885 6.706547 13.407829 8.444860 6.374471 8.754614 8.966488 9.806495 6.816829 7.804284 11.466917 7.919276 5.231866 10.319329 4.665518 7.245387 11.285881 10.137507 10.864059 8.969300 9.240040 11.448896 6.542509 10.918320 9.650705 10.568706 8.124952 11.470892 9.901718 10.161682 10.428604 8.300470 1.286999 8.858609 8.333783 10.831973 5.391345 11.227469 7.416291 10.751758 10.010840 6.448896 13.673248 10.052543 10.169651 12.676639 10.542981 4.009473 2.228111 9.832359 9.933027 9.282493 TCGA-A2-A0T5 39 0 NA 531 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 5 2 2 4 4 5 5 NA NA 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 5 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 5 0 5 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 3.547736e-05 1.127091e-05 0.216919739696312 0.144613159797542 0.144613159797542 0.361532899493854 99.1323210412148 9.9166797 9.2972836 11.7450353 9.1061910 8.5728090 9.6082981 9.7767242 9.2513991 10.8713324 12.6565277 11.1204422 10.3856809 3.8668289 13.2681373 3.1887649 9.2322787 7.6844541 8.2981199 9.5271836 12.5913449 4.0043306 13.8553737 4.7543584 9.6450396 10.7291585 5.8022915 NA 10.6616401 9.6566907 3.7148280 9.0226613 8.7963852 1.7148390 4.7148280 9.3401309 9.9084902 10.0312353 10.9603807 9.9112252 10.7919404 8.7916435 11.5068952 15.4912267 7.6142453 9.8679578 10.6326973 11.1986438 4.9199407 2.1298765 8.6984550 11.2781302 NA 10.9839547 4.3777901 4.1596130 4.9542940 10.3638845 12.2994774 10.9617005 13.0077886 12.7952754 7.1373601 11.1912367 10.6579940 10.9574728 11.1533888 4.2997868 12.3283105 11.9682816 -0.4550201 10.1819806 9.3825309 3.7547486 3.0684645 11.7791216 10.3678721 10.2880543 9.6709621 5.7928293 9.7975685 12.7030393 11.9034168 10.0782327 9.9595882 1.58380000 1.59730000 -0.00235530 -0.00235530 0.00221930 0.00652620 -0.01064600 -0.00429290 0.57156000 0.57156000 0.57156000 -0.00788630 -0.00138580 0.00000000 0.00000000 0.00000000 -0.00429290 -0.00429290 0.00249690 0.00426930 0.00069327 0.00097064 0.00097064 0.00097064 0.00277450 0.00277450 -0.00415460 -0.00055444 0.00127680 -0.00346270 0.00319100 -0.00235530 0.00221930 -0.01354000 -0.00352160 -0.00352160 -0.01064600 -0.00429290 -0.00832520 -0.00124730 -0.00124730 0.58148000 -0.00083160 -0.00083160 -0.00226380 0.00041593 0.00485790 0.00485790 0.00000000 0.00000000 0.00000000 0.00000000 -0.00429290 -0.00429290 -0.00429290 -0.00124840 0.00958830 0.00958830 0.00069327 -0.60931000 0.00097064 0.00097064 0.00624810 0.00277450 -0.00415460 -0.00055444 0.01056400 0.00235810 0.00235810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.114 -0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.558 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.572 0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.114 -0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.558 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.572 0.572 0.000 0.000 0.000 0.000 8.2488066 NA 5.0684645 11.0017707 12.0130179 6.9861868 11.3915687 9.5818801 8.1469891 -1.4552179 11.6868504 10.8636322 4.7928293 NA 3.4990933 8.5221829 3.5892961 9.9805732 11.3338252 11.2416532 9.7719171 1.3522500 7.5974708 10.1536198 6.5838214 3.5449057 NA NA 10.5810766 4.1596130 7.6429347 8.3229800 6.5728093 10.3413118 11.0469889 5.7347286 9.0840619 3.6323613 7.8395238 13.5909612 7.7396598 7.7999317 NA 1.3522500 8.7110660 0.1298765 5.0526985 NA 3.1298600 5.4874188 3.0043396 10.9553543 -0.4550201 9.4275460 10.7167053 9.9795312 6.0125083 8.4637663 11.1140466 7.4427486 2.2453435 2.5449057 12.2570000 3.5449057 NA 2.6323613 4.4275458 13.750815 5.556129 8.911225 13.268137 10.393033 11.575915 12.591345 12.196515 9.610992 10.594411 13.232825 11.763012 8.698455 8.849825 3.499093 7.380954 11.267284 11.231841 12.007789 6.778523 13.821170 9.142024 5.052698 9.271973 8.703513 10.644704 6.600185 7.816366 11.120442 7.248806 4.299787 10.919127 8.900254 6.579756 12.957671 9.872456 10.598490 9.603571 8.546311 11.253771 4.377790 10.156071 10.031235 10.407928 10.392352 11.040758 10.487051 10.100930 10.956943 9.460782 -1.455218 8.858568 7.436687 11.278130 5.036754 10.983955 7.380954 10.518213 10.363885 7.650811 15.121742 10.200881 10.453671 13.241219 11.086000 2.004322 -1.455218 9.869083 10.047735 9.584507 TCGA-A2-A0T6 50 0 NA 575 breast stage iib t3 n0 (i-) m0 female 2009 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 3 2 4 3 4 4 4 5 NA NA 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.843738e-06 7.282743e-07 7.61904761904762 2.85714285714286 0 3.80952380952381 85.7142857142857 10.6202775 10.4218817 12.1934628 10.1578296 8.2768558 8.8005402 10.1597371 9.8353287 10.0926229 11.5711003 11.2231379 10.5939951 5.6663589 13.5771793 4.1069345 10.0554005 7.2018191 8.7738866 9.5124456 12.8377137 -1.7259471 13.7024337 4.8887530 9.4897619 10.7216406 8.1824336 -1.7259471 10.5022491 8.6116626 3.8590054 8.3825652 7.7334723 -0.7259471 5.1929043 10.2216777 10.1699946 9.9196993 11.7912180 8.9951399 12.0278843 NA 9.5801025 14.9381408 7.6950744 10.5142299 11.8865638 11.6429564 5.2513214 2.6663476 9.5703834 11.3505224 -0.1409846 11.4776946 6.4489670 7.5124458 5.5594429 10.8566532 11.8193673 10.6596336 12.3277121 13.0085916 7.9640387 11.4123126 10.9530436 11.4452176 11.3573539 5.5869238 12.2020964 12.1586883 0.8590154 10.4228351 9.1604995 3.7364209 6.1688586 10.5712436 10.2648539 10.3009100 10.1265703 4.8739559 8.7024009 13.3513989 13.6205545 10.2383817 9.5903223 0.53696000 0.53925000 0.00000000 0.00000000 0.00374650 0.22191000 0.00013863 -0.56724000 0.22237000 0.22237000 0.22237000 0.00027728 0.00650520 -0.03749000 -0.03749000 -0.03749000 -0.01216200 -0.01216200 -0.00360110 -0.00280400 0.00388540 0.02188400 0.02188400 0.02188400 0.46127000 0.46127000 0.51054000 -0.00249380 -0.00235530 -0.00235530 -0.00069303 0.00000000 0.00374650 -0.00110870 0.22191000 0.22191000 0.00013863 -0.56724000 0.00513590 -0.00027724 -0.00110870 0.22237000 -0.00148040 -0.00148040 0.00221930 -0.01867600 0.00650520 0.01670500 -0.03749000 -0.03749000 -0.03749000 -0.04309600 -0.01216200 -0.01216200 -0.01216200 -0.00211480 -0.00280400 0.00346870 0.00388540 -0.56396000 0.02188400 0.02188400 0.00232760 0.46127000 0.49904000 -0.00249380 -0.00027724 -0.56664000 -0.56664000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.550 0.000 0.000 0.000 0.000 0.461 0.461 0.000 0.537 0.000 0.000 0.000 -0.567 0.000 0.000 0.000 0.000 0.000 0.000 0.222 0.222 0.000 -0.567 0.000 0.000 0.222 0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.550 0.000 0.000 0.000 0.000 0.461 0.461 0.000 0.537 0.000 0.000 0.000 -0.567 0.000 0.000 0.000 0.000 0.000 0.000 0.222 0.222 0.000 -0.567 0.000 0.000 0.222 0.222 0.000 0.000 0.000 0.000 8.0781716 0.8590154 5.6490808 10.2613048 10.7512931 6.9606113 10.6974194 10.2318683 8.4333447 5.4237866 12.2057017 11.1217794 2.1809435 1.7334845 4.6490808 8.7334723 4.3401278 10.2527513 11.4320192 10.6318677 8.7838158 6.7211238 7.7211238 9.6871398 7.6490801 7.9622910 NA NA 11.4423995 6.7375651 7.7231892 8.3019465 5.2047785 10.0331967 10.7102317 5.7658927 8.5455039 NA 8.8580637 12.4223585 8.3414752 7.5594429 0.8590154 2.4439779 8.2003366 NA 3.8887530 NA 6.6876682 5.5649817 5.0019598 9.8970077 NA 8.1242278 10.2183868 9.8892105 5.3074650 10.2318683 12.6284968 9.4761646 3.6315932 4.8887530 10.6855518 2.8589955 NA -1.7259471 2.3615157 12.020881 4.700307 8.216555 13.577179 10.301256 10.553071 12.837714 11.191786 9.299872 11.349687 13.737374 11.129104 9.570383 9.716984 NA 7.251320 11.465408 11.3921707 11.8026170 7.4514601 14.0395069 8.8034712 7.1257895 9.2950207 7.6337901 10.6796875 8.0846123 6.9142859 11.2231379 6.7658940 3.7976045 11.8592381 5.8286290 5.8611812 13.6693406 10.8972364 10.6807772 7.9848474 8.2810681 12.3796219 7.3102147 11.7352260 9.9196993 10.2644994 9.5495833 11.2514996 10.0822005 10.7293680 10.8059096 9.3753599 0.2740529 9.5354657 9.0112460 11.3505224 7.1320215 11.4776946 8.6469057 10.2183611 10.8566532 7.7169840 14.0144013 9.7951503 10.5013558 13.2524831 11.0922235 3.7334737 1.7043408 10.6847571 10.5579972 9.7472392 TCGA-A2-A0T7 51 0 NA 631 breast stage iia t2 n0 (i+) m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 1 4 4 3 3 4 2 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.387189e-07 40 13.3333333333333 6.66666666666667 20 20 10.7590047 10.3868521 11.7182735 9.7471724 8.3467703 9.1025584 10.2221701 9.6827115 10.6096446 14.2311914 10.3180027 10.8056199 4.9898565 12.8468778 2.6008168 10.7219793 5.8738353 8.7408544 11.0122260 12.7256142 2.9089474 13.2235214 7.8914933 9.3141713 11.8578669 7.2718934 0.2085173 11.4084775 10.8401303 2.9089474 8.9406660 7.6535137 1.2085173 3.9089378 10.5128498 11.0983826 9.7816723 11.3518817 9.4682418 11.2320796 2.4564382 8.5975919 15.2328915 9.0935847 9.3202861 11.3108023 11.5434700 4.9089378 3.9633816 9.2866492 12.0775139 -1.7913579 11.3450090 6.2906474 6.0602485 7.2197261 10.5137052 11.7919339 10.6255598 12.3911256 12.7243830 8.4469034 10.9943596 10.5375015 11.3015859 11.1950516 5.1742826 11.9629685 10.4682417 0.2085173 10.5780958 10.1048309 3.0931038 5.4276665 11.0140408 10.1462401 10.2339841 10.8910542 3.7934590 7.8667102 13.3762694 12.7931674 10.0884646 9.7068491 0.5793400 0.3252700 0.1460700 0.1206400 -0.2281000 0.5390700 0.0597940 -0.4408100 -0.4334400 -0.4334400 1.8547000 0.0569400 0.0410820 0.0560850 0.0560850 -0.3192600 -0.4102500 0.3608400 0.0982700 -0.1332900 -0.4025200 0.2686000 0.1036600 0.1514400 -0.3443500 -0.3443500 -0.3443500 0.3923000 -0.3718900 0.0393370 -0.1227400 0.1460700 -0.2278500 -0.2281000 0.1297700 0.1297700 0.0597940 -0.4408100 -0.4408100 0.0151680 -0.4399400 -0.4334400 -0.2684100 -0.1146900 -0.1146900 0.0029133 0.0410820 0.0688080 0.0560850 0.0560850 -0.3367600 -0.3367600 -0.4242300 0.3608400 0.4899100 0.0982700 -0.1332900 -0.1332900 -0.4029600 -0.3835100 -0.2673300 0.1036600 -0.2687900 -0.3443500 -0.3443500 0.1371700 -0.0802750 -0.3383600 -0.3147100 0.000 0.000 0.000 -0.319 0.000 0.331 0.000 -0.133 -0.403 -0.203 -0.384 -0.267 0.000 0.000 -0.269 -0.344 -0.344 0.000 0.981 0.123 0.123 0.000 -0.338 -0.123 -0.123 0.124 0.124 -0.228 -0.228 0.519 0.157 -0.441 -0.441 0.000 0.000 -0.433 1.812 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 -0.319 0.000 0.331 0.000 -0.133 -0.403 -0.203 -0.384 -0.267 0.000 0.000 -0.269 -0.344 -0.344 0.000 0.981 0.123 0.123 0.000 -0.338 -0.123 -0.123 0.124 0.124 -0.228 -0.228 0.519 0.157 -0.441 -0.441 0.000 0.000 -0.433 1.812 -0.115 -0.115 0.000 0.000 7.8720567 -0.7916076 6.6842325 10.9037267 11.7269057 6.0291238 11.8788228 9.5141270 7.8741717 3.7630822 11.6448196 11.8441338 2.5304204 -0.2065619 3.3377824 8.3144070 3.7934590 10.0021018 11.9674503 11.0047409 9.1116271 6.0222790 7.9717108 10.1176415 6.0602485 5.2959617 1.9089282 -0.7916076 11.0989528 7.2610663 7.0158532 8.8532559 9.0262816 10.3900483 10.6234479 4.5122775 8.5077066 -1.7913579 8.4337060 12.4688300 7.8323799 6.8451237 -1.7913579 6.5438887 8.2759327 -1.7913579 4.1857793 2.1153995 4.6842296 4.4179538 3.4179470 10.9451118 2.8523585 9.4676532 10.3042251 10.3451693 5.1626934 9.3939934 12.1984251 8.4729410 3.8232093 4.2959581 10.2580067 1.2085173 -0.7916076 0.5304703 3.9633816 12.276108 5.306532 7.986575 12.846878 10.157596 10.584081 12.725614 11.259027 8.668954 10.686257 13.528735 10.792286 9.286649 8.278620 2.667938 7.451673 12.879265 11.451524 12.332297 7.130339 13.977559 9.436716 6.408170 10.377797 8.814904 11.060101 7.019070 8.813052 10.318003 6.908938 4.475286 10.846708 6.789699 8.072189 11.858877 10.472941 10.664596 9.023882 9.216927 11.219726 4.976684 10.895043 9.781672 10.406636 10.202145 11.232772 11.437317 10.833522 10.943843 8.767876 5.548347 9.055031 8.129477 12.077514 5.684232 11.345009 7.931306 10.505701 10.513705 8.092669 13.795426 9.683725 9.902421 12.821137 10.533242 1.208517 1.094101 10.956901 10.286316 9.730590 TCGA-A2-A0YC 59 0 NA 990 breast stage iib t2 n1mi m0 female 2008 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 1 1 1 1 5 3 4 1 3 8 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 6.935946e-08 20 13.3333333333333 13.3333333333333 40 13.3333333333333 11.1125197 9.8989440 12.1839158 10.1831210 8.9096609 9.8088432 10.5735696 9.4644132 10.0840395 12.9579581 11.3315686 10.6176369 -0.2273542 13.8308305 3.3971595 9.2142307 7.4284984 8.3053504 9.1469846 13.4455001 4.6139736 13.6360171 4.3169929 9.0194737 11.2302216 8.5960369 -1.8124856 9.4643667 9.8079271 1.5096452 7.1331515 6.5800249 NA 4.9821220 9.9946595 10.5556679 10.1114061 10.8012664 10.2107684 12.0132623 -0.8122323 11.3245381 14.4098417 8.4721843 9.6342736 9.8618994 12.1171505 4.4914876 4.8601335 9.2279968 11.2500906 -0.8122323 12.2312472 5.1877084 6.3676157 5.2429911 10.5391986 11.9467631 10.4287966 12.1315040 13.0302539 7.6368559 10.9200866 10.6632354 11.3560659 11.6063504 5.4261104 13.2503015 6.5928487 NA 10.6458574 8.8387589 3.2781335 5.1649874 10.0094811 10.2128468 10.3620087 9.6290952 4.5275583 9.0316282 12.2431591 10.7122488 10.5278354 9.4171268 0.64359000 0.64359000 0.00513590 0.00513590 0.00569190 0.01590100 -0.01563600 -0.00055444 0.02539000 0.02539000 0.02539000 -0.01464100 -0.00110870 -0.07267500 0.50290000 -0.75011000 0.00000000 0.00000000 -0.07254100 0.00083195 -0.00443120 0.61462000 0.61462000 0.61462000 -0.04319500 -0.04319500 -0.04319500 -0.00705640 -0.02383000 0.00416320 -0.00013862 0.00513590 0.01195800 0.00569190 0.01349200 0.01237600 -0.01563600 -0.00055444 -0.00055444 0.00332990 0.00332990 0.02539000 -0.00083160 -0.00083160 -0.00083160 -0.00083160 -0.00110870 -0.00110870 -0.07267500 -0.05590300 -0.74664000 -0.75471000 0.00000000 0.00000000 -0.00899060 -0.07254100 0.00083195 0.00083195 -0.00443120 -0.74133000 -0.74133000 0.61462000 0.01754400 -0.04319500 -0.04319500 0.00402430 -0.00443120 -0.02027500 -0.02027500 0.000 0.000 0.000 -0.666 0.000 0.000 0.000 0.000 0.000 -0.083 -0.741 -0.741 -0.152 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 0.000 0.000 0.000 0.000 -0.083 -0.741 -0.741 -0.152 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3131207 NA 5.5005886 10.8168361 12.1209368 7.3523878 11.3152179 9.8582749 9.2100749 0.9950865 11.8115886 11.2901110 6.7346012 2.8881490 3.0945908 8.1272866 4.1184428 11.0014883 11.6306506 11.3738214 9.6087200 5.0331983 7.8024168 9.8102165 6.8024168 7.6553125 1.1877044 NA 11.0509255 6.0456876 7.6139721 8.3563793 6.0764501 10.2573851 10.6509761 3.5096325 8.3824641 -1.8124856 7.4960460 12.3117477 8.5960369 8.3066482 NA 6.4823272 8.6471389 6.8846748 4.3576294 NA 4.4731115 6.7142455 2.5800249 9.8872796 NA 7.4707955 10.4165258 9.6389182 7.0014881 9.7254109 13.7246828 7.7820317 3.4731115 3.0945908 12.3094835 2.9425896 NA 2.2751561 0.5096452 13.8156459 4.3374542 8.7394154 13.8308305 10.3507278 10.5501989 13.4455001 13.1000820 8.3812323 11.1132616 12.9538219 9.9723420 9.2279968 8.9926450 0.7726458 7.4213268 11.4995973 11.1391740 11.6717748 7.0945982 13.2254660 9.0611514 5.4544951 9.2169944 9.2817849 10.3373717 6.8060933 7.5670853 11.3315686 6.6181594 NA 11.2837634 4.5452580 6.5274238 10.5856491 10.1516870 10.4960461 9.1206601 8.4320708 12.6772416 5.3775333 12.2546128 10.1114061 10.9373671 10.1524089 11.5001647 9.6491866 9.5611161 10.7331543 8.9088063 -0.8122323 8.6336840 8.6652833 11.2500906 4.6306501 12.2312472 8.2870548 10.7166496 10.5391986 7.5276459 13.3502558 10.2972114 9.6624272 13.5349825 10.1978855 2.5096452 NA 10.6081937 10.8881469 9.9122210 TCGA-A2-A0YD 63 0 NA 769 breast stage iib t3 n0 (i+) m0 female 2009 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 3 5 2 2 4 4 3 3 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 6.242351e-07 27.6595744680851 44.6808510638298 0 21.2765957446809 6.38297872340426 10.58680789 10.12541102 12.00870267 9.91963207 8.27541591 9.52286985 10.23241541 10.11287668 10.20865881 9.08918377 11.28977869 10.62908554 -0.04945693 12.61100132 3.53544336 10.15790647 7.05552106 8.45563546 9.97516342 12.70342350 3.06596860 13.58469142 5.94295077 9.69588527 9.90128431 6.65092536 NA 12.25476920 7.89885287 2.27241144 7.65092536 8.54169603 NA 5.99488063 9.93774942 10.39929000 10.33382968 12.14544740 9.83719806 11.44250544 -0.63441943 11.03551518 15.06413262 8.73766953 9.47582339 11.64701831 10.44966691 4.66930462 3.72307795 9.55039819 12.16044638 NA 11.15097536 5.51527091 6.71866986 5.43161293 10.75757194 11.67868939 10.40066568 12.92053136 13.04351775 9.15587140 11.18530282 10.52795831 11.22680370 11.41605182 5.13370736 11.69853843 9.88072990 NA 10.60631424 9.01477901 3.37451093 5.94295077 10.99487950 10.55503866 10.09216686 9.79440644 3.17287150 10.15749966 14.18440785 12.26336836 9.99396838 9.70704174 1.55240000 0.86592000 0.00138680 0.00138680 0.00166420 0.00694350 -0.01204100 -0.00609040 -0.00180140 -0.00180140 -0.00180140 0.00180300 0.00180300 0.01740400 0.01740400 0.01740400 -0.00526100 -0.00526100 0.00305220 -0.00691950 0.00041593 0.00694350 -0.00027724 -0.00027724 0.00249690 0.00249690 0.00249690 0.45139000 0.00291330 -0.00290910 -0.00159420 0.00138680 0.00166420 0.00972760 -0.00340910 -0.00340910 -0.01009400 -0.00609040 -0.00609040 -0.00318590 -0.00318590 -0.00180140 -0.00297640 -0.00297640 -0.00297640 -0.00249380 0.00180300 0.00180300 0.00652620 0.01740400 0.01740400 0.01740400 -0.00526100 -0.00526100 -0.00526100 0.00000000 -0.00691950 -0.00691950 0.00041593 -0.47279000 0.00694350 -0.00027724 0.00610900 0.00249690 0.00249690 0.45139000 0.00597000 -0.46621000 -0.46621000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.453 -0.020 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.549 0.451 0.451 0.000 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.453 -0.020 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.549 0.451 0.451 0.000 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.06769572 NA 6.00937853 10.75380934 11.11434470 7.26976628 11.18130646 10.04803479 8.69341238 5.10698895 11.26336833 11.66149986 3.40992039 3.17287150 4.14688327 8.31826396 3.75784467 10.69082833 11.54915827 12.11905307 9.04324251 7.46092027 7.54294208 9.85737596 7.32841912 8.13866193 4.68745267 -0.63441943 11.37114744 6.51018183 8.01298147 8.38650274 9.43093901 10.25286539 11.09705405 3.75784467 8.43161210 NA 8.68180448 11.95914743 8.02194771 7.91626942 -0.04945693 2.95048708 8.96357527 NA 5.23588786 NA 6.05202239 4.06595999 3.72307795 10.35065327 NA 8.81467154 10.43026562 9.78495639 8.46223804 9.95423747 13.32425684 9.51399953 3.12041830 4.12041001 10.79962979 2.88908410 NA 3.75784467 2.17287150 13.594041 4.594340 8.096842 12.611001 10.484140 10.753540 12.703424 11.894343 9.291077 10.971697 14.116910 10.641647 9.550398 9.015677 NA 7.016574 11.967294 11.432789 11.623500 6.889085 13.198163 9.209444 6.447672 8.863375 7.918192 10.221174 7.547917 8.138662 11.289779 6.998518 5.009379 11.109516 8.427569 6.498409 11.734439 10.075468 10.723350 8.431383 8.540449 12.473230 6.308037 12.674153 10.333830 10.282895 9.847322 11.160345 10.945310 10.864871 10.727467 9.744901 NA 9.686182 8.028227 12.160446 5.494806 11.150975 8.547917 10.859878 10.757572 7.639318 13.400923 9.861378 10.496737 13.231304 10.667305 3.980236 -1.634419 10.595543 10.488998 9.432957 TCGA-A2-A0YE 48 0 NA 554 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 3 3 4 4 1 1 5 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 8.669932e-07 3.81477e-07 26.3157894736842 31.5789473684211 2.63157894736842 23.6842105263158 15.7894736842105 8.90890806 9.89457194 12.32996610 9.88154625 8.69945481 10.07322189 9.60341011 10.48624234 9.59693142 12.44363232 10.00768285 10.34928057 -0.07308969 12.47488441 1.51182222 13.79954017 5.62730625 8.57911263 8.69725395 4.95661429 NA 7.99295476 7.75341400 9.86593026 10.83200158 5.08337082 2.04232915 7.28734670 12.19988380 -1.65790044 9.21841963 8.59101624 3.42936155 4.60869098 9.56650752 10.44223659 9.99832767 9.02226238 10.11215368 11.21380802 0.92683442 5.97125844 15.16915865 7.51362970 9.64568347 11.28990494 11.69504964 4.88106256 NA 9.21303810 12.02138291 NA 7.83775785 4.55135605 5.11008757 6.90032343 7.98936100 12.15918627 9.50366457 12.47118581 13.92897707 8.64682436 10.67309968 10.09676522 11.58849498 10.53327054 5.37532447 11.83450712 6.43465992 1.14925937 10.34331099 9.26225555 3.04400935 3.34190038 7.63652385 9.39379135 10.27596221 9.18739290 2.14925937 7.66383061 12.87340610 12.72067179 11.23349667 11.18051583 0.365920 0.338200 -0.329940 0.578440 -0.335830 3.245600 0.154420 0.612990 0.106010 0.570060 0.088692 0.170310 -0.576430 0.345280 0.441050 1.365500 1.239600 -0.335370 -0.340440 -0.537030 0.974200 -0.129400 0.740050 -0.108540 0.052383 0.089272 0.089272 0.583630 -0.323330 -0.316810 0.468780 0.566320 -0.149010 -0.335830 -0.344230 -0.344230 0.154420 0.612990 0.544720 3.319200 0.110080 0.110840 -0.550460 -0.550460 -0.550460 -0.550460 -1.061300 -0.589020 0.371660 0.441050 -0.346410 -0.363780 0.431080 -0.335370 -0.335370 -0.340440 -0.537030 0.381550 -0.368500 0.596740 -0.129400 -0.144380 -0.386810 -0.894190 0.089272 -0.335030 0.562670 -0.353270 -0.353270 -0.407 -0.577 0.370 0.048 0.100 -0.331 -0.340 -0.537 -0.368 0.679 -0.324 -0.129 -0.129 -0.328 -0.328 0.000 0.000 -0.284 -0.284 -0.335 0.249 0.734 -0.353 0.766 0.766 -0.332 -0.332 -0.149 -0.336 1.023 0.678 0.600 0.600 0.127 0.127 0.136 0.136 -0.550 -0.550 0.000 0.000 -0.407 -0.577 0.370 0.048 0.100 -0.331 -0.340 -0.537 -0.368 0.679 -0.324 -0.129 -0.129 -0.328 -0.328 0.000 0.000 -0.284 -0.284 -0.335 0.249 0.734 -0.353 0.766 0.766 -0.332 -0.332 -0.149 -0.336 1.023 0.678 0.600 0.600 0.127 0.127 0.136 0.136 -0.550 -0.550 0.000 0.000 7.95477153 NA 6.96395494 10.81687622 11.61351172 4.69734015 10.61802717 9.22085810 8.50866832 NA 11.61482411 12.22700808 1.14925937 NA 3.86546357 9.25852882 4.27264285 9.87523253 11.98135657 10.91909557 8.67505798 -0.07308969 7.96028813 9.35243082 5.50177351 5.84174925 1.34192884 1.92687236 10.41905226 1.80132424 9.49482139 8.27411766 11.15347819 9.91407249 10.37084485 -0.07308969 9.69007761 5.85760286 8.33342463 11.74624608 9.09511953 6.70384683 NA -0.07308969 7.97671361 4.51182854 2.58983538 NA 3.58983538 4.29702997 4.34190038 10.77861434 5.13631855 11.46521594 10.99452372 9.48783501 4.29609761 10.69670312 13.60777419 6.91933174 1.34192884 3.42936155 9.81256160 -1.65790044 2.51182222 0.66384555 7.36980845 12.92541460 9.17953071 8.52801684 12.47488441 9.49164990 9.98305145 4.95661429 10.32097064 10.38616374 12.03091797 12.95787721 9.20763618 9.21303810 8.22301654 -0.07308969 7.82773203 10.83024510 10.9301490 12.9662413 5.3419039 13.6810544 7.9212185 8.9436735 9.2122675 9.1017911 9.8744876 4.8176386 8.4891078 10.0076829 8.9418156 6.0353908 11.1638760 8.5525742 9.5294528 12.6546440 8.8357583 11.2622557 7.4267109 8.8166227 9.4846481 6.0492626 11.2261916 9.9983277 9.3489302 11.1098803 12.1670603 10.7435823 11.1956022 10.0702486 8.9739892 NA 9.0167217 7.3780763 12.0213829 6.6411110 7.8377578 8.4788938 9.9553285 7.9893610 7.8810613 13.1882747 9.3780763 10.0323374 13.3653973 11.0143282 0.6638455 -0.6581281 10.6686132 10.1071890 8.3794499 TCGA-A2-A0YF 67 0 NA 1535 breast stage i t1b n0 (i+) m0 female 2009 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 1 1 3 1 5 3 4 1 3 4 NA NA 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 3.121176e-07 21.0526315789474 21.0526315789474 5.26315789473684 10.5263157894737 42.1052631578947 11.19968406 10.43922480 11.42911320 9.79595506 8.86169674 9.82074875 9.48005079 9.70841143 8.83340784 14.43887967 11.19609448 10.78990609 4.11010428 12.71115766 3.44528970 8.03756013 7.13212747 8.48967940 10.40118331 13.56700840 1.89506991 13.67761855 5.08773438 9.79968847 11.02676154 6.83927687 -1.91212987 7.76545319 8.48326761 NA 7.22215925 6.67269547 NA 5.45405413 10.51058656 9.97837770 11.57217866 10.27322832 10.20082432 11.57758135 NA 12.12725222 13.23239162 8.28450766 8.72345139 12.25577865 11.43549312 3.44528970 4.70244146 9.32434551 12.39976543 1.08773438 11.23430204 3.48004534 6.17519523 4.37313312 10.96578428 11.66090714 10.05855827 12.10567268 13.06380518 7.54921248 11.33803180 10.94016925 11.71264302 10.56296016 3.37313312 11.76214635 8.36734398 0.08773438 9.89307426 9.14437120 2.61254123 5.71708963 10.97304840 10.60367956 9.90631551 10.13792216 1.67269688 11.08544212 11.94045793 11.47022229 9.61667583 9.43313869 0.61498000 -0.65687000 -0.00027724 -0.00027724 -0.01784600 0.00000000 -0.00366060 -0.00366060 0.01517000 0.01517000 0.00652620 0.01852300 0.02398700 0.00791750 2.89630000 -0.00719580 -0.70442000 0.01140000 -0.01133500 0.00638710 0.03580600 0.04471500 0.04471500 0.04471500 0.04443200 0.04443200 0.04443200 0.05409100 -0.60052000 0.00124810 -0.00622860 -0.00027724 0.05508800 -0.01784600 0.00000000 0.00000000 -0.00366060 -0.00366060 -0.00332430 0.00777830 0.00777830 0.03933700 0.01028500 -0.32774000 0.02216400 0.02216400 0.02398700 0.02398700 0.03467700 0.02412700 -0.74054000 -0.74054000 -0.73343000 0.01140000 0.01140000 -0.01133500 0.00638710 0.00638710 0.03580600 -0.71167000 0.04471500 0.04471500 -0.00590280 0.04443200 0.04443200 0.05409100 -0.01312700 -0.68497000 -0.68497000 0.000 0.000 0.000 -0.733 -0.704 0.000 0.000 0.000 0.000 0.728 0.016 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 -0.685 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.733 -0.704 0.000 0.000 0.000 0.000 0.728 0.016 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 -0.685 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.66043345 NA 5.69506400 9.53171285 11.53546236 5.78789473 10.36211149 8.97163667 8.29561421 1.08773438 12.24862900 11.11597096 3.25765938 0.67265163 3.21701352 8.19625785 4.29718408 9.70060184 11.77532776 11.63559189 9.41584717 -0.32734837 7.31895488 10.14165924 6.63462812 5.91428227 2.25764430 NA 10.95771274 4.53067632 8.14301580 7.67269618 5.55533763 9.53842913 10.91070246 6.79509286 7.91269237 NA 7.69691190 11.93674746 7.54100366 7.97647649 0.08773438 1.08773438 8.55737524 NA 2.54715366 -1.91212987 3.29719142 5.27982784 2.48005827 9.75750419 -1.91212987 8.83004295 10.73136409 10.09441014 4.39151341 9.26078572 12.17229264 8.10035800 2.25764430 3.37313312 14.17345478 4.21701352 NA 3.21701352 0.67265163 15.877721 4.657589 8.878896 12.711158 10.669875 9.949596 13.567008 12.701753 9.370243 10.220233 12.862932 10.754623 9.324346 8.110101 2.087734 7.736990 11.852916 10.383789 11.715039 7.036101 14.013286 9.613254 4.760157 8.929298 9.457876 10.390983 5.958098 9.515570 11.196094 6.829200 2.611290 11.804338 6.252641 7.064154 10.009574 10.878896 11.513605 8.797679 7.067873 12.151381 5.098963 11.103861 11.572179 11.177680 9.892671 12.012268 9.349241 11.000061 10.921414 8.885395 NA 8.522518 7.884600 12.399765 4.920622 11.234302 9.239384 10.461305 10.965784 7.082087 13.422002 9.944159 9.867863 12.820537 9.449129 -1.912130 -1.912130 11.081910 10.613744 9.423124 TCGA-A2-A0YG 63 0 NA 666 breast stage iiic t2 n3a m0 female 2009 NA yes infiltrating ductal carcinoma 14 white not hispanic or latino 3 2 1 2 7 1 2 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.179111e-06 3.81477e-07 20 15.5555555555556 2.22222222222222 35.5555555555556 26.6666666666667 9.79165163 10.68842963 12.08944995 10.14684382 8.12369258 9.86709368 10.42407494 11.12326843 9.89818537 15.31122537 10.27501683 11.47917346 -1.60779250 16.92917875 2.91594151 8.27195691 7.87013227 8.52036803 8.31718647 12.95640415 NA 12.86207917 1.85179900 8.61882192 11.69629721 8.44358262 0.97731656 10.73444849 11.55790893 0.71431147 9.00708363 6.80176526 0.39242734 4.29926664 9.81233392 10.61244972 9.35960001 11.56386335 10.08934136 12.27864192 -0.02268344 10.28643359 14.97818723 8.46339358 9.21175448 11.53687269 12.15942020 4.29926664 4.99228806 9.60182723 11.68383231 NA 10.55947824 4.60182723 5.49040647 4.78469242 10.91446481 11.90708783 10.25268483 11.84061917 12.85634508 8.39237367 10.82125731 10.05770965 11.37304892 10.93757958 5.18678973 12.47875883 10.27463475 -1.60779250 9.30451469 9.06921236 3.29203076 4.81864097 8.77607799 10.24568330 11.04095604 10.13678725 5.36965492 10.37928240 12.90338514 10.71852234 10.31644401 8.91200998 2.66570000 -0.04386500 -0.01779500 1.16850000 -0.03176000 1.38090000 0.35056000 0.06380400 -0.00179270 -0.00179270 0.64580000 0.57685000 -0.54188000 -0.43222000 -0.02095200 -0.02095200 -0.00040715 0.36691000 0.00000000 -0.02163800 -0.00815380 1.12190000 3.65690000 3.65690000 -0.03285100 -0.10249000 0.20795000 0.82198000 -0.39974000 -0.41684000 0.38767000 -0.02520000 -0.02465300 -0.03407800 0.35758000 0.35758000 0.34991000 -0.01861900 0.02049100 0.63628000 0.63628000 -0.02807300 -0.41057000 -0.42155000 0.35725000 0.35725000 -0.54188000 -0.13690000 -0.42276000 -0.00511400 -0.02095200 -0.02095200 -0.00040715 0.35758000 0.35758000 0.01881200 -0.02026600 -0.02026600 -0.00815380 -0.00040715 -0.41618000 -0.40561000 -0.26648000 -0.38203000 -0.13535000 0.82198000 0.56047000 -0.42767000 -0.41794000 0.427 -0.137 -0.399 0.000 0.000 0.358 0.000 0.000 0.000 0.363 0.363 -0.402 0.000 -0.266 -0.266 -0.102 -0.102 -0.110 0.975 0.822 0.822 0.560 -0.418 0.000 0.000 0.000 0.307 0.000 0.000 0.923 0.923 0.350 0.118 0.636 0.636 0.000 0.646 -0.387 -0.029 0.140 0.297 0.427 -0.137 -0.399 0.000 0.000 0.358 0.000 0.000 0.000 0.363 0.363 -0.402 0.000 -0.266 -0.266 -0.102 -0.102 -0.110 0.975 0.822 0.822 0.560 -0.418 0.000 0.000 0.000 0.307 0.000 0.000 0.923 0.923 0.350 0.118 0.636 0.636 0.000 0.646 -0.387 -0.029 0.140 0.297 8.36965361 7.22209645 5.60182723 9.78039114 10.83272390 5.69085006 12.97328005 8.53076097 8.21539079 -0.02268344 10.64946691 11.93869551 3.25035527 3.29925931 2.39237238 7.96791329 1.85179900 9.69501265 11.54497554 12.06855124 8.55224526 2.19971945 7.53957837 9.45711653 6.43676817 4.09281633 5.65915964 NA 10.04790450 5.16055721 7.23786387 8.21574120 6.05058441 9.81754252 10.30114165 4.64030279 8.97639686 NA 7.43949764 12.42605486 8.19327351 6.82282573 -0.60757266 7.18027618 7.84770070 3.14725785 3.25035527 -1.60779250 4.54212182 4.84967407 1.19975086 10.96436340 1.97735320 10.43403289 10.43471714 10.16633710 5.00708335 9.41474167 12.63532457 8.08411743 3.34657401 1.97735320 10.69043639 1.71431147 NA -1.60779250 3.25035527 12.475905 7.417513 8.450365 16.929179 9.773917 10.287192 12.956404 12.611542 9.515202 10.906841 13.944533 9.287949 9.601827 7.334888 2.977335 9.924730 12.329564 11.7073818 13.2009861 8.8558982 13.4009770 8.4354011 5.2125538 9.2849166 9.5152017 11.4132982 5.4798352 8.7846911 10.2750168 5.7052564 -1.6077925 10.9932159 8.0487985 8.8430593 9.8415224 9.7216095 10.9493587 7.6091196 7.8186384 10.7785057 5.4798352 11.9619161 9.3596000 9.4264849 9.7383333 11.3869040 9.8862293 10.4741900 11.2215019 9.8852284 10.6172798 9.7784519 6.9546163 11.6838323 5.3696549 10.5594782 6.7499257 11.4138744 10.9144648 7.4718589 12.6118343 10.1655130 10.4530698 12.1421385 10.3011417 0.7143115 NA 10.4011525 10.7733759 9.8353173 TCGA-A2-A0YH 53 0 NA 659 breast stage iiia t2 n2a m0 female 2009 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino 3 2 4 3 1 2 1 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.456549e-06 4.161568e-07 12.962962962963 57.4074074074074 5.55555555555556 16.6666666666667 7.40740740740741 10.2277520 9.6502399 11.6191748 8.7481184 8.4533118 9.0402198 10.0176849 9.2648327 9.9654003 12.6502398 10.4645842 10.1085708 -0.4951254 12.7852803 3.5049381 9.1159693 2.8268637 8.7635105 9.1488007 12.4956689 0.8268434 13.3290579 6.4936297 9.4441490 11.2764340 7.3566932 2.4118330 12.3308533 10.6521494 1.9643617 9.1542007 7.3566932 NA 5.9143349 9.9705109 10.3330810 9.6147752 10.8453509 9.8509041 11.1062510 5.2598336 10.4426861 14.2254025 7.3893594 9.7174286 11.3249239 11.8847289 3.9312103 2.8268637 9.1923202 11.4818665 -0.4951254 11.2445142 6.6898205 7.2531374 6.0823726 10.9330429 11.6662339 10.0899070 11.2627511 12.4095791 8.8064407 10.5049445 10.0278643 10.7670393 10.8910764 5.1487999 11.6264780 10.0719498 0.8268434 10.3974873 10.6212884 1.6748674 7.3058447 10.9364421 10.0913152 10.2539758 11.4647654 4.9643755 8.6660763 12.4109895 11.3102853 10.5551332 9.1702804 0.5786200 0.5786200 0.0448570 0.0342590 0.0225850 -0.1433500 0.0013868 0.0013868 3.6569000 3.6569000 2.1800000 -0.0085721 0.0000000 -0.0029091 -0.0029091 -0.0029091 0.1171200 0.1171200 -0.0212350 0.3004200 0.0133530 -0.2815600 0.0931850 0.0931850 0.3044100 0.3265600 0.3265600 0.3068100 -0.2864400 -0.3227300 -0.2675700 0.0448570 -0.2415600 -0.0066432 -0.1433500 -0.1433500 0.0013868 0.0013868 0.0013868 0.2577700 0.0059700 -0.6464000 0.2879100 0.2879100 -0.3207700 -0.2969100 0.0000000 0.0000000 -0.0029091 -0.0029091 -0.0029091 -0.0029091 0.1171200 0.1171200 0.1171200 -0.0212350 0.3004200 0.3004200 0.0133530 -0.6213100 -0.2815600 0.0931850 -0.3007200 -0.2682900 0.3265600 -0.3284300 -0.0977590 -0.0914200 -0.2256400 0.000 0.000 0.000 0.000 0.117 0.117 0.000 0.300 0.000 0.573 -0.048 -0.282 0.000 0.000 0.000 -0.268 0.058 -0.310 0.269 0.307 0.307 0.000 -0.226 -0.268 -0.268 0.000 0.000 -0.242 0.000 -0.143 -0.143 0.000 0.000 0.000 0.000 -0.646 0.057 -0.009 -0.297 0.000 0.000 0.000 0.000 0.000 0.000 0.117 0.117 0.000 0.300 0.000 0.573 -0.048 -0.282 0.000 0.000 0.000 -0.268 0.058 -0.310 0.269 0.307 0.307 0.000 -0.226 -0.268 -0.268 0.000 0.000 -0.242 0.000 -0.143 -0.143 0.000 0.000 0.000 0.000 -0.646 0.057 -0.009 -0.297 0.000 0.000 8.60165975 NA 6.11965498 9.76938712 11.26649569 6.76774351 10.63261639 9.59857996 8.98624936 NA 11.67862162 12.09698097 1.08990487 0.08990487 2.59239724 7.78339379 3.71439940 11.37627220 11.55903999 10.89833497 9.62518244 NA 6.93957216 10.03730040 7.64193541 5.24641189 3.54933649 NA 10.42492503 4.96437553 6.80415297 9.12332994 8.63293887 9.95332403 10.22689803 3.41183296 9.19232019 -1.49492209 6.89726221 11.63229403 7.32512373 6.47072882 -1.49492209 7.96437610 8.55615348 2.96438015 2.75287702 NA 5.89726221 3.25982987 2.50495084 9.93068486 0.08990487 9.03827430 10.23414034 9.92806040 4.57103358 10.13657631 14.35366521 9.57036065 4.75287166 4.05953699 11.77450949 -0.49512541 NA 0.50497626 5.33783595 13.401298 6.781069 8.339415 12.785280 10.066232 10.558531 12.495669 11.694923 9.661660 11.064800 12.844029 11.179357 9.192320 8.535612 1.826884 7.623886 11.893365 10.555813 12.231056 6.785715 14.064080 8.476488 6.733764 9.411083 8.935397 9.776197 7.654692 7.331493 10.464584 5.743348 1.674867 11.021876 4.790345 7.578925 11.502830 10.120574 10.905290 10.333874 8.912212 12.107063 7.546604 11.210944 9.614775 10.811861 10.101600 11.784555 9.629712 10.445258 10.609871 9.224333 1.964362 9.350615 7.232865 11.481867 8.358254 11.244514 9.011748 9.884323 10.933043 7.829125 12.738065 10.231163 10.704617 12.403735 9.928586 1.312317 3.682461 10.174715 10.577747 9.310688 TCGA-A2-A0YI 62 0 NA 1505 breast stage i t1c n0 (i+) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 3 4 3 4 4 5 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 1.387189e-07 33.3333333333333 16.6666666666667 8.33333333333333 25 16.6666666666667 10.4544029 10.2170133 11.1468499 10.1748423 8.5091459 9.7683382 9.3936687 10.2108565 9.4641798 14.0062627 10.6785461 10.8713552 2.1610170 12.5723776 3.7135529 9.1557384 6.8614480 8.7114983 9.6693308 13.1470395 -1.7456478 13.6714095 6.1549841 9.3353877 10.2961186 8.7155969 NA 9.4032294 11.0319890 4.1367574 8.4252940 7.8852943 1.2541102 5.6635069 10.2576352 10.7749815 11.0424278 11.4664617 10.3039659 11.7699403 0.5760867 11.2104935 14.3828971 8.7301648 9.6006089 11.6168831 11.4259196 5.3093981 2.2541102 10.0921394 11.9423676 0.2541102 10.9194532 4.8979713 8.0206461 4.6291584 10.6171569 11.6337664 10.1186904 12.3873398 13.0087439 7.7638922 10.5194393 10.4624827 11.5426950 10.6091931 4.9265403 11.7624073 10.5412525 -0.7458898 10.1074269 9.1980973 3.4340277 7.4114644 10.6730240 9.7464713 10.2604434 10.2068586 2.8390727 9.6824774 13.1293387 12.4026733 9.8433004 8.9096480 0.41373000 0.40861000 -0.00013862 -0.00013862 0.00402430 0.00000000 -0.00083160 0.00097064 0.00278760 0.00278760 0.00278760 0.00069327 0.00069327 0.64983000 0.46776000 -0.41696000 -0.00586310 -0.00263220 -0.42963000 0.00055459 0.00208050 -0.00995650 -0.00995650 -0.00995650 -0.01119800 -0.01119800 -0.01766600 0.00319100 -0.45297000 0.41373000 0.00319100 -0.00013862 0.00402430 0.00402430 0.00000000 0.00000000 -0.00083160 0.00097064 0.00097064 -0.00055444 -0.00055444 0.01419000 0.00277450 0.00277450 -0.00415460 0.42016000 -0.00093888 -0.00093888 0.00694350 0.01223700 -0.41696000 -0.41696000 -0.00586310 -0.00263220 -0.00027724 -0.42963000 0.00055459 0.00055459 -0.00208270 -0.00097017 -0.00995650 -0.00995650 -0.32994000 -0.01119800 -0.02063400 0.00319100 0.00694350 -0.00512270 -0.00512270 0.000 0.000 0.000 -0.417 0.000 0.000 -0.430 0.000 0.000 0.000 0.000 0.000 0.000 -0.330 -0.330 0.000 0.000 0.414 0.414 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.417 0.000 0.000 -0.430 0.000 0.000 0.000 0.000 0.000 0.000 -0.330 -0.330 0.000 0.000 0.414 0.414 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6496514 0.2541102 6.4488745 10.0321944 10.6910891 6.7627435 10.5596091 9.7343067 8.3950495 1.0614997 11.5780165 11.1134094 5.3202067 5.0485326 4.3626452 8.4537896 5.0485326 10.6605881 11.5763272 10.9651389 9.2991943 7.8871128 7.7519691 9.8282377 8.1519628 6.1789297 0.8390727 -0.7458898 11.7085451 7.1213957 6.7257930 7.8943625 5.9888278 9.8609713 10.4553223 6.5395202 7.6507222 NA 8.5337280 12.8458734 7.9528222 7.0387522 2.0614652 7.5138602 8.5464388 2.0614652 4.2541178 -1.7456478 7.1966316 5.5111264 4.7459687 9.8966203 NA 9.0403870 10.6579283 9.7947297 6.1120975 10.8570481 12.9233346 9.9541234 3.2541102 4.7932769 11.3109243 1.5760383 0.2541102 3.0090067 1.2541102 12.6942727 3.5760504 8.6980969 12.5723776 10.1911233 10.8353179 13.1470395 12.5784385 8.8669858 11.1165609 13.2455063 10.1113208 10.0921394 8.7698170 -0.7458898 7.2957763 11.5200253 11.4850384 11.5501732 6.6845705 14.0392619 9.4525623 7.8577434 8.6719698 7.4165087 10.8532468 8.3375965 9.3672083 10.6785461 6.9194533 1.5760383 11.2103120 5.3415802 6.2430864 10.4984812 10.9311762 11.1438114 7.4414694 7.3012410 13.2532365 8.5498863 11.7341552 11.0424278 10.8249218 9.6619161 11.2050377 9.8997758 11.2818506 11.1348487 9.0231286 NA 9.0558336 7.7350895 11.9423676 8.4599107 10.9194532 6.7176422 11.2460961 10.6171569 7.7440252 14.1315692 9.6850925 9.9657843 13.2604434 9.9497806 4.4240420 0.3517414 11.4154067 10.6949865 10.0802686 TCGA-A2-A0YJ 39 0 NA 566 breast stage iiia t3 n2a m0 female 2010 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino 3 3 4 4 5 1 5 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.560588e-06 2.080784e-07 19.2307692307692 13.4615384615385 9.61538461538462 32.6923076923077 25 10.4916411 9.3907655 11.1303517 10.8388654 8.6124082 7.5130864 9.1721569 10.7158378 12.2699959 13.7221492 10.4981489 10.5870672 -1.2976084 15.5366775 2.9504498 11.8023560 5.3172245 8.3481735 6.8873900 3.6094004 -1.2976084 5.2103109 10.1161430 9.3549746 10.9207756 3.7469039 2.8724348 7.4304358 10.5005818 -0.2974311 10.7753176 7.8420662 NA 3.4029541 8.5290635 10.6420943 10.2142678 9.5667012 10.8538488 11.6363901 8.8535316 10.6369431 15.1397470 7.0831059 9.5636020 12.0038684 11.2638030 1.2874723 NA 9.2571040 11.4081475 -1.2976084 10.3144620 3.0244438 5.2416724 4.6094063 11.2370611 11.1888473 8.4540591 12.1532109 12.3342605 7.6183943 11.8084236 11.2231780 10.6822976 10.7465676 4.6567137 11.5933493 9.4822344 3.0948272 9.8768167 10.5487890 3.1691393 2.2874723 9.6213783 9.9873392 10.3784721 10.7144411 2.7899796 7.7137425 12.4574026 12.9438280 9.3373262 9.0356704 0.59476000 0.59476000 -0.00152430 -0.00152430 -0.22625000 0.00041593 0.32334000 0.29047000 -0.64283000 2.20820000 1.51350000 0.79820000 3.65690000 -0.21528000 0.28200000 0.28200000 0.42805000 -0.00010411 0.27379000 -0.30944000 -0.20970000 0.20932000 3.65690000 -0.29638000 0.22978000 -0.31949000 -0.60071000 0.37693000 -0.28346000 -0.30932000 -0.14605000 -0.00152430 -0.32100000 -0.23374000 -0.62326000 -0.62379000 0.32334000 0.29580000 -0.33918000 0.99800000 0.29915000 -0.64283000 -0.00304750 -0.00304750 0.88406000 -0.00443120 -0.32623000 -0.61961000 -0.29801000 0.28200000 0.28200000 0.28200000 0.00402430 0.00000000 0.00000000 0.58847000 -0.30944000 -0.30944000 -0.20970000 -0.02562000 0.20932000 -0.27512000 0.59458000 -0.17234000 -0.56406000 0.37693000 3.65690000 -0.09894500 -0.09894500 0.194 -0.604 -0.215 0.067 0.000 0.000 0.282 -0.309 -0.210 0.279 0.000 0.203 0.000 0.595 0.595 0.190 0.000 0.262 0.595 0.377 0.377 -0.159 0.000 0.806 0.660 0.000 0.000 -0.506 -0.226 -0.623 -0.623 0.293 0.293 0.998 0.299 0.871 1.513 0.000 0.000 0.113 0.113 0.194 -0.604 -0.215 0.067 0.000 0.000 0.282 -0.309 -0.210 0.279 0.000 0.203 0.000 0.595 0.595 0.190 0.000 0.262 0.595 0.377 0.377 -0.159 0.000 0.806 0.660 0.000 0.000 -0.506 -0.226 -0.623 -0.623 0.293 0.293 0.998 0.299 0.871 1.513 0.000 0.000 0.113 0.113 8.1903551 NA 6.0423642 10.3282239 10.7345608 4.8127087 11.4148271 9.9957051 8.0933072 NA 10.7147905 11.9788707 8.9936857 NA -0.2974311 10.2690448 2.5098732 8.2280361 11.9377814 11.0272582 8.9751449 NA 7.0991195 9.9076974 3.8317962 5.6911991 -1.2976084 3.0948272 10.8420664 -0.2974311 4.3172245 9.5942988 10.3195233 9.8741736 10.7899780 -0.2974311 8.2338967 NA 4.7248849 12.5430963 7.5790323 9.2484449 NA NA 7.7686045 3.3463754 2.1619522 NA 1.2874723 2.7061106 5.4029541 12.1711391 5.9409208 9.4838748 10.6497867 9.9156193 4.1943708 8.3607264 10.9137950 6.7081403 1.5098478 3.9879211 10.6079021 2.4029677 12.3361915 5.2723704 8.0153978 10.563990 6.457402 8.296840 15.536677 9.771293 11.026696 3.609400 10.735250 9.427029 11.483055 13.200741 12.630663 9.257104 7.844622 3.226077 7.867422 12.253021 10.922893 11.622310 5.457404 13.774185 8.695453 7.413322 8.894808 8.686934 10.389059 4.060065 5.389016 10.498149 4.430432 -1.297608 10.286538 8.607902 8.642961 13.780874 9.622123 10.322277 8.452385 8.425323 8.340951 3.872445 11.541085 10.214268 9.800547 10.627328 11.604890 13.409766 11.159639 10.630293 10.065007 NA 9.917836 6.249409 11.408147 4.024444 10.314462 4.702513 10.334242 11.237061 7.877441 13.274623 9.776657 10.677288 12.226077 10.909835 -1.297608 NA 10.154241 9.628811 9.593539 TCGA-A2-A0YK 61 0 NA 588 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 3 3 4 3 3 3 4 3 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4.543045e-06 1.838026e-06 8.55614973262032 81.283422459893 0 6.95187165775401 3.20855614973262 10.7773678 10.3728815 11.9507527 10.3803292 8.0485937 9.6876394 10.4873003 10.0061509 10.0850333 11.8382673 11.1781577 10.5845106 2.4378136 12.0751641 4.4135670 9.8111149 6.3701277 9.6190498 10.2920598 12.4380026 1.3382818 12.8173375 7.6183870 9.1061135 10.4336761 5.7883125 -1.4691302 9.8494669 8.6315863 4.9903559 8.7476700 7.9924036 0.8528778 5.6806704 10.3350552 10.4043682 9.6653505 11.8846223 10.1502271 11.6401018 6.5024675 10.2507408 14.7348265 8.5292607 10.3826614 11.5379514 11.2440958 5.7788525 5.8347036 9.5539854 12.8071213 0.8528778 11.4198576 6.2313633 7.9780074 4.6183855 10.8108249 11.9138183 10.0797461 12.0692344 12.9508185 7.0227773 10.7296761 10.7333480 11.4699523 11.7553781 5.1891366 11.6422229 11.1995876 1.1158989 10.1570895 9.0826323 4.3125490 6.3511035 10.7491846 10.1377919 10.1493097 10.0222763 4.3122803 9.5670978 13.2485470 12.9835515 10.1092968 9.7818147 0.14221000 0.14221000 0.00000000 0.00000000 -0.00277070 0.00055459 -0.00069303 -0.00069303 2.20700000 -0.00332430 -0.00567570 0.00499690 0.00499690 -0.00610100 1.31910000 -0.31389000 0.00277450 0.00277450 -0.00027724 0.00722170 0.00708260 -0.29886000 -0.29886000 -0.30660000 0.00307730 0.00307730 0.01428400 0.02146300 0.14221000 0.14221000 -0.00318590 0.00000000 -0.00277070 -0.00277070 0.00055459 0.00055459 -0.00069303 -0.00069303 -0.00069303 0.00208050 0.00055459 -0.31914000 -0.06732400 -0.06732400 -0.06732400 0.01014600 0.00499690 0.00499690 0.01433000 -0.00610100 -0.31389000 -0.31389000 0.00277450 0.00277450 0.00277450 -0.00027724 0.00722170 0.00722170 0.00708260 -0.30122000 -0.29886000 -0.29886000 -0.31307000 0.00374650 0.01428400 0.02146300 0.00374650 0.02511000 0.02511000 0.000 0.000 0.000 -0.308 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 -0.299 -0.299 -0.313 -0.313 0.000 0.000 0.142 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.308 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 -0.299 -0.299 -0.313 -0.313 0.000 0.000 0.142 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 0.000 7.8862752 5.2991091 6.9903559 10.0807088 11.2215769 6.1054790 11.2613943 10.5601699 8.5596176 5.8438080 11.7336602 10.9897229 3.9903559 4.7207491 4.2858091 8.1566327 4.6602099 11.3137177 11.0938820 10.6543989 8.7729074 4.9738684 7.5139178 10.3061229 9.2858116 8.1437929 1.5309197 NA 11.3530966 8.0485937 7.6983421 7.8116951 8.3997466 10.3002289 10.7752880 6.2858109 8.3269638 1.3382818 8.8000509 13.3379268 8.3334403 7.8255446 -0.4691302 3.4851176 8.3302057 2.4378136 5.0227761 2.7788604 8.2537317 5.6548394 5.4967084 9.9954698 0.8528778 9.8912226 10.4749040 9.6640664 6.9189419 10.9665944 13.2638865 9.5231544 5.4851209 5.2313633 10.5266913 1.9903377 0.5309696 -0.4691302 3.2858165 13.183719 5.022776 8.575318 12.075164 10.571214 10.318419 12.438003 12.170604 8.851725 11.076371 13.170830 11.042924 9.553985 7.192702 1.115899 7.185560 11.245814 11.134087 11.889575 5.948776 14.263700 9.181078 9.071052 9.324527 7.623681 10.498064 8.814013 8.876329 11.178158 5.496708 1.700839 11.213919 7.347907 7.123194 11.903245 11.312284 10.574977 8.313922 7.899431 12.045885 9.074923 11.316483 9.665350 10.670156 9.456479 11.594656 10.682575 10.435559 10.758540 8.933936 2.231371 9.358283 8.215112 12.807121 9.281631 11.419858 6.634211 11.215015 10.810825 7.754926 14.227266 10.060355 10.540753 12.644178 10.533739 8.299109 2.923244 10.704914 10.626980 9.967115 TCGA-A2-A0YL 48 0 NA 1474 breast stage iiia t3 n2a m0 female 2010 NA yes infiltrating lobular carcinoma 4 white not hispanic or latino 2 2 3 3 4 3 3 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 1.733986e-07 15.3846153846154 61.5384615384615 0 15.3846153846154 7.69230769230769 10.65054172 10.47203808 11.95523204 9.97005281 8.30455120 9.33921223 10.57226764 9.78443397 10.46975861 11.71258306 11.12438093 10.64593434 2.05807401 12.12510530 4.46617029 9.49655662 7.62910813 9.24410358 9.48692791 12.52600372 4.33492576 13.45592387 7.07532190 9.11502674 10.83616187 3.56709514 -0.05739166 11.12810242 8.98882213 3.71520150 8.46355339 8.26152705 2.44511751 5.39106654 10.17182693 10.31619768 9.70913638 12.37218860 10.59425723 12.01295211 7.07874431 11.61988670 14.85903126 8.29554855 9.75477412 11.03404290 10.93483779 5.53755389 1.81709110 9.49014470 12.54197799 -1.64250430 11.59575115 5.61503368 5.85749089 5.31184094 10.36326954 12.14013138 10.21368143 12.80110661 13.08205227 7.92939749 10.87875461 10.75570455 11.50770957 11.87445303 5.36887309 12.41207974 11.73241282 1.16497931 10.12417393 9.18101233 4.14162897 6.11919638 10.80730952 10.05765117 10.29022890 9.86939767 5.07189135 9.61797650 13.39033648 13.25582121 9.99788993 9.87777262 0.31559000 0.31835000 -0.00318590 -0.03163200 0.00110930 -0.00249470 0.00138680 -0.00152430 -0.00041585 -0.00041585 -0.00041585 0.00194180 0.00194180 0.00541390 0.00541390 0.00541390 0.00305220 0.00305220 -0.33248000 0.00332990 0.00972760 -0.32333000 -0.32333000 0.77502000 0.00305220 0.00305220 0.00305220 0.00460410 0.00221930 0.00055459 -0.00041585 -0.31681000 0.00110930 -0.00195940 0.00000000 0.00000000 0.00138680 -0.00152430 -0.00152430 -0.00502570 0.00194180 -0.00041585 -0.00041585 -0.00041585 -0.00041585 -0.00041585 0.00194180 0.00194180 0.00541390 0.00541390 0.00541390 0.00541390 0.00305220 0.00305220 0.00305220 -0.33248000 0.00332990 0.00263570 -0.00661530 -0.32621000 -0.32333000 -0.32333000 -0.15157000 0.00305220 0.00305220 0.00917050 0.00110930 -0.00055444 -0.00055444 0.000 0.000 0.000 0.000 0.000 0.000 -0.332 0.000 0.000 0.000 -0.323 -0.323 0.000 -0.152 -0.152 0.000 0.000 0.000 0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.332 0.000 0.000 0.000 -0.323 -0.323 0.000 -0.152 -0.152 0.000 0.000 0.000 0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1258293 0.3576083 5.3234277 10.2712824 10.5816467 7.1027138 10.9826689 9.9063561 8.3073698 5.1649994 11.5016658 11.1035273 2.7499633 3.4451043 4.6055714 8.6043857 3.7152015 10.7683613 11.4615884 10.7168455 9.2547341 3.1125333 8.1208573 10.0825851 7.1617758 5.7326844 0.9426083 NA 11.2480993 7.3548241 7.4971964 8.2750173 8.5852608 9.9931772 10.5285089 5.4869267 8.4437811 -1.6425043 8.4074934 13.7456623 8.1794190 7.2554903 -1.6425043 2.0580740 8.1125323 2.2645364 4.4020400 NA 5.6522656 4.0300712 3.9426083 10.4759373 -0.6422791 10.2891213 10.4704103 9.8777726 5.5573182 9.7622545 12.8062776 9.1504353 2.8812143 4.8812045 10.8114301 0.3576083 -0.6422791 1.3576646 2.2645364 12.8109709 5.2645364 8.4984747 12.1251053 10.0795986 10.4888589 12.5260037 12.3277509 9.5990323 11.3254116 13.4304894 11.9687851 9.4901447 9.1083520 -0.6422791 8.5474695 11.4242388 11.33062478 11.66085492 7.74134900 13.68414120 9.12002710 7.22183069 9.60141406 8.24334157 10.32053737 6.60081833 6.43979432 11.12438093 5.94260834 4.94260834 11.19132576 8.03183737 6.60258010 12.91085429 10.54437826 10.26303194 7.79643682 7.89680404 13.11513918 5.76703501 11.78344180 9.70913638 10.43278981 9.86593505 11.57014137 10.62326003 10.60527588 10.94893354 9.69582422 -0.05739166 9.05564632 8.37674923 12.54197799 6.90839142 11.59575115 7.61738812 11.07731191 10.36326954 7.47398899 14.58149588 10.08130594 10.47658603 12.55632025 10.78259859 3.84949893 -1.64250430 10.51151360 10.80576128 9.93176548 TCGA-A2-A0YM 67 0 NA 965 breast stage iia t2 n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 4 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.595268e-06 5.895554e-07 30.3030303030303 21.2121212121212 6.06060606060606 25.7575757575758 16.6666666666667 11.5583982 9.6151660 11.8755569 10.1086193 8.2107439 8.7191372 9.8801855 10.2013920 12.0652591 12.9112939 11.5624778 10.3758806 2.9912089 12.0024440 4.4457797 10.3546214 6.3077910 9.0485065 10.4149940 5.5401110 -1.7636605 8.5389680 10.2075136 9.2991782 11.1322831 6.3448533 0.2363395 9.7923563 12.0334841 -1.7636605 10.9746326 7.6771981 -1.7636605 3.3237880 8.5298010 11.5652846 9.6998537 9.9131678 9.7156043 10.7882778 1.2363395 9.2384410 15.6625285 10.0875160 9.0525129 11.9708272 11.6112328 3.0436770 -1.7636605 10.0829950 9.2745624 NA 10.6334691 5.2136078 7.2697523 7.1281129 8.5275001 12.1846965 9.4298547 10.9930940 13.0698618 7.2164684 10.7284328 10.3932624 11.9231580 11.6519390 5.4340377 12.4546654 8.1876139 -0.7636605 9.4925380 10.6425343 4.3492379 5.7520287 10.7569479 11.0040999 10.8786066 10.4276970 -0.1786980 2.8801761 13.2254132 11.0786795 10.3832161 9.6135398 1.04220000 0.35512000 0.01754400 0.57905000 0.05128600 0.37792000 0.82645000 -0.05482500 -0.02452400 1.10150000 1.08010000 0.38982000 -0.00055444 -0.07427700 -0.01409000 -0.01409000 1.04150000 -0.04183800 0.73492000 -0.42298000 -0.39408000 1.36780000 0.36657000 0.73303000 -0.00816240 1.42590000 -0.43148000 0.00013863 0.01474900 -0.03040400 0.39297000 0.01754400 0.05128600 0.30314000 -0.43279000 -0.43550000 0.90593000 0.72716000 -0.03422300 -0.02728900 -0.41388000 -0.41805000 0.36707000 0.37002000 0.00485790 0.38899000 -0.02376200 -0.01349500 -0.44070000 -0.01409000 -0.41509000 -0.41509000 1.04150000 -0.42953000 -0.03040400 -0.41542000 -0.01119800 -0.04468600 -0.38884000 -0.40030000 -0.01119800 -0.01243800 -0.46121000 -0.00816240 -0.39697000 0.02777800 3.65690000 -0.00124730 -0.00484610 0.390 0.000 0.000 0.000 0.000 0.000 -0.415 0.000 -0.389 0.000 -0.400 0.000 0.000 0.316 0.316 0.000 0.000 0.355 0.355 0.000 0.000 1.182 0.000 0.000 0.000 0.542 0.542 0.197 0.197 -0.433 -0.433 0.727 0.000 0.000 0.000 0.000 1.067 0.370 0.370 0.074 0.365 0.390 0.000 0.000 0.000 0.000 0.000 -0.415 0.000 -0.389 0.000 -0.400 0.000 0.000 0.316 0.316 0.000 0.000 0.355 0.355 0.000 0.000 1.182 0.000 0.000 0.000 0.542 0.542 0.197 0.197 -0.433 -0.433 0.727 0.000 0.000 0.000 0.000 1.067 0.370 0.370 0.074 0.365 6.7281817 8.0404601 6.5401094 10.9300340 11.7663697 5.6169193 10.4415116 9.7124780 7.4022412 -1.7636605 11.6400070 11.0123983 0.8213020 NA 2.5582676 10.7503035 3.2807188 9.9188850 11.2175397 11.3856000 9.4657488 4.6792718 8.7331831 10.0541123 6.0111154 3.2363242 NA -1.7636605 11.0719849 5.3237916 6.3809874 8.7080044 9.5571297 10.4969371 10.9642497 1.0436945 9.3084619 5.8945413 7.4482179 12.4308552 7.4482179 6.0692188 NA 7.0911973 7.1876144 1.4062645 1.9367793 -0.7636605 5.2250127 1.2842180 8.0372290 11.5322416 5.8362423 10.9786387 11.1724150 9.4711466 3.6957600 9.1166780 13.5246907 9.0739570 6.0045126 3.3656086 9.6281098 2.9367604 5.9978795 0.2363395 7.4771203 10.986199 11.123359 7.972731 12.002444 10.075533 10.616790 5.540111 11.015433 8.617872 11.601259 13.785603 12.737047 10.082995 7.170020 3.851039 8.923705 11.191616 11.8726140 12.0077155 5.2136078 13.9382843 9.7822590 5.5124545 10.0368247 8.3158139 11.6142541 7.2078724 6.4457830 11.5624778 11.0672405 1.2363395 11.6377421 10.1905256 9.2569689 13.5718243 11.0515123 10.2352722 8.6307920 7.8510394 9.5722779 6.4310864 9.1822193 9.6998537 10.0731686 10.1577982 12.4246090 12.7301222 12.1616982 11.3836932 9.4137487 -0.7636605 8.9568727 7.4603306 9.2745624 5.2250127 10.6334691 7.1788441 11.4878117 8.5275001 8.0655131 13.7342434 10.0221904 9.5401100 12.7296218 12.4019429 3.1905200 NA 11.3723591 10.1078495 9.9987113 TCGA-A2-A0YT 56 1 723 NA breast stage iiib t4b n2a m0 female 2008 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino 3 2 1 2 4 3 1 2 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.352509e-06 2.774378e-07 43.75 16.6666666666667 8.33333333333333 16.6666666666667 14.5833333333333 10.1748721 10.7257751 11.5449961 10.3442735 8.9997202 8.8801198 10.6381543 9.8747421 10.0856621 15.2962667 11.5180511 11.2161826 -0.3056101 12.5965424 5.9982000 8.1387433 3.3948571 8.4559699 9.1748723 12.3797514 0.4313555 13.0513290 1.4314090 9.3227608 11.6829849 8.0327836 1.9168206 8.0073015 11.4248887 0.6943899 8.6755100 6.4714005 NA 4.6640447 10.3963025 10.4650824 9.7474393 10.2636413 9.7636444 10.9970574 8.4768709 10.8605816 14.7318082 8.6089334 10.2598316 11.4648071 11.2978903 2.6944122 3.5357171 9.9859730 10.0490352 -0.8905726 10.8852720 6.9360042 5.2793821 3.6944234 10.6174983 11.4217718 10.0413016 9.7937663 12.7238783 8.1009776 10.3826689 9.5484869 11.0061669 11.4155177 4.9674361 11.9157035 9.5060608 -1.8905726 10.2393830 9.2264498 3.0650552 5.2490091 10.8460694 9.1435671 10.8566001 10.1896074 2.4313823 4.4844926 11.1778984 10.9886564 10.1404680 8.2438823 0.5574400 0.5574400 0.4307500 0.4263800 0.3362600 0.6688200 0.1095000 -0.2831100 2.1814000 2.2542000 2.5062000 0.0000000 0.0000000 -0.5208200 2.9492000 -0.5285900 0.0213230 1.0797000 -0.6674400 -0.2613100 0.0666440 -0.2716400 -0.2716400 0.5318600 -0.2414300 -0.2414300 -0.2415600 0.7198700 0.0297470 -0.3088600 -0.2614300 -0.6130700 0.3346400 0.3209300 0.0324220 0.0427320 0.1095000 -0.2831100 -0.2831100 -0.2660000 -0.2822700 -0.6487400 -0.2760700 -0.2760700 -0.2760700 -0.2760700 0.0000000 0.0000000 -0.5208200 -0.4967300 -0.5289000 1.4046000 0.0037465 -0.2907100 -0.2907100 -0.3011000 -0.2405800 -0.2585400 0.0627940 0.1316900 -0.2716400 -0.2716400 -0.6199700 -0.2414300 -0.2414300 0.0806010 -0.6286500 -0.2518900 -0.2591400 0.000 0.000 -0.480 -0.480 0.000 0.000 -0.301 -0.261 0.000 0.267 0.267 0.107 0.379 -0.256 -0.620 -0.241 -0.241 0.000 0.557 0.665 0.665 -0.629 -0.252 0.000 0.000 -0.613 -0.613 0.335 0.335 0.626 0.000 0.109 -0.174 -0.292 -0.292 -0.638 0.330 -0.276 -0.276 0.000 0.000 0.000 0.000 -0.480 -0.480 0.000 0.000 -0.301 -0.261 0.000 0.267 0.267 0.107 0.379 -0.256 -0.620 -0.241 -0.241 0.000 0.557 0.665 0.665 -0.629 -0.252 0.000 0.000 -0.613 -0.613 0.335 0.335 0.626 0.000 0.109 -0.174 -0.292 -0.292 -0.638 0.330 -0.276 -0.276 0.000 0.000 7.8924542 NA 5.9232371 9.5273085 12.2180622 6.8318874 10.9964862 9.3623993 8.8458748 3.3189097 10.6184887 12.4612421 4.8643446 3.3573831 0.9167823 7.9103561 3.4670055 9.9782786 12.7033140 11.3254440 9.6271255 0.9167823 7.7533124 10.0578232 6.9705431 5.8098954 4.3189097 NA 10.1408126 6.8509232 6.5103353 7.8150886 7.7241659 9.8534069 10.3771206 1.9168206 8.3890664 0.6943899 6.6524879 11.8338633 7.2515629 6.9200277 -1.8905726 8.0342685 8.3585694 1.9168206 3.0163537 NA 4.3189097 5.1459586 0.6943899 11.6205909 3.1538540 9.7070431 10.5100687 9.5549882 4.4844926 9.4086641 12.7426216 8.9905700 3.2387410 3.4670055 9.8185398 0.6943899 NA -0.8905726 3.8643446 13.5848678 6.5892362 9.1975816 12.5965424 9.2881209 10.9711246 12.3797514 10.2699578 8.2451652 10.7156298 13.0629250 10.3478607 9.9859730 8.1955922 0.9167823 7.8643434 13.3023653 10.8388643 12.2380948 6.2743623 12.5332272 8.7497009 4.9549454 8.6897146 9.1699290 10.3315325 5.3189097 10.0716290 11.5180511 7.6388869 2.5688834 10.2671187 2.9674453 9.3352117 9.6162595 10.1952604 10.6953575 8.9798207 8.5760425 12.5241413 3.7533157 10.8507397 9.7474393 9.9296349 9.0931621 12.9720450 9.9087377 10.6454604 10.6551446 9.3514393 6.8973590 8.6521882 7.3823422 10.0490352 4.2992813 10.8852720 4.6486150 10.0324121 10.6174983 7.9863717 12.5778255 10.9332213 10.0170978 11.9882733 9.9829002 -0.8905726 3.9168110 10.9559259 10.5874672 9.2140548 TCGA-A2-A1FV 74 0 NA 714 breast stage iib t3 n0 (i+) m0 female 2010 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 5 1 4 3 1 4 1 1 1 1 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 1.733986e-07 33.3333333333333 18.1818181818182 6.06060606060606 24.2424242424242 18.1818181818182 11.6723328 10.8804329 12.2274826 10.0407505 8.4486842 6.6803820 10.6777040 9.0838683 9.1625945 9.7047902 10.9010151 10.5596108 1.4537019 12.4515874 5.2837773 7.1816224 8.1495104 8.6835891 7.4130600 13.4277982 3.9562054 14.7171182 3.3712382 8.4078987 10.9575280 9.8984871 -1.7164338 5.9702785 5.7267195 2.6760868 8.2894020 6.4736019 -0.1313132 5.1039550 10.4499404 11.2054323 10.0634966 12.5133472 10.7718685 12.8140007 4.6760925 10.9119949 14.1071943 9.4014594 10.7058420 11.5771052 11.9677588 4.9842156 5.9772639 9.8989472 10.2581918 NA 11.2640954 11.0119104 3.9842156 2.2837736 10.0527886 12.4458539 9.9455553 11.4075754 13.6929361 7.1071449 11.9093720 11.5992538 12.4725206 11.8994069 5.0651371 12.6035905 13.5819473 1.8687263 9.4593269 9.7324098 3.6107473 3.8073343 9.6787758 9.8209957 10.2703305 10.8041504 4.4932310 8.9103990 11.9098285 11.1814337 10.5122953 9.1831341 0.8031500 -0.0044312 -0.0276710 -0.0351760 0.0416000 0.0000000 0.0151680 -0.8742400 3.6569000 1.4293000 1.5993000 -0.0037225 -0.0078863 0.0106480 -0.0065974 -0.0065974 -0.0136770 -0.0136770 -0.8978200 0.0108420 -0.0378980 0.7997500 0.0329860 0.0329860 -0.0084385 -0.0084385 -0.0084385 -0.0027707 -0.0033243 0.8031500 0.8327400 -0.0276710 0.0416000 -0.8406600 0.0000000 0.0011093 0.0151680 -0.8754100 0.0054139 1.2768000 1.2777000 0.0052749 0.7364400 0.7364400 0.7364400 0.7364400 -0.0078863 0.0242680 0.0339720 -0.0065974 -0.8668800 -0.8909300 -0.0136770 -0.0136770 -0.0136770 -0.8309800 -0.8621600 -0.8665800 -0.0378980 -0.8930400 -0.8667200 0.0329860 0.7964600 -0.0031859 -0.0084385 -0.0027707 -0.8359900 0.8048000 0.8188400 0.000 0.000 0.000 0.000 0.000 0.000 -0.831 0.000 0.000 0.000 -0.854 -0.867 0.000 0.796 0.796 0.000 0.000 0.000 0.803 0.000 0.000 -0.825 0.819 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.846 -0.846 1.246 1.246 0.000 1.574 0.736 0.736 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.831 0.000 0.000 0.000 -0.854 -0.867 0.000 0.796 0.796 0.000 0.000 0.000 0.803 0.000 0.000 -0.825 0.819 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.846 -0.846 1.246 1.246 0.000 1.574 0.736 0.736 0.000 0.000 8.1433123 8.1448642 6.1664202 9.2063617 9.5089848 6.8468593 10.0675941 10.0062774 7.8558141 3.5317058 12.8751828 10.8002997 4.7595127 3.4130660 4.5125935 8.2277574 3.8073343 8.0302914 11.2504630 11.2412421 9.9522191 2.9276310 8.0218694 8.3005855 6.1417577 7.7329258 -0.7161967 -1.7164338 10.6886527 8.0519615 6.6146937 8.3158230 5.2145134 9.3712402 11.1508629 3.8687361 7.1135005 NA 7.3975198 14.3278298 8.5233757 6.8874034 -0.7161967 6.8649785 9.0319702 NA 3.8383669 0.6056840 2.8073343 7.4837682 -1.7164338 9.2196789 NA 9.4974890 9.9742118 10.0987602 4.4932310 9.6787758 11.8089310 7.6169325 3.6413264 2.4537019 12.2171913 6.9737754 -0.1313132 1.7432133 -0.7161967 12.5158204 4.1664182 9.0919370 12.4515874 9.2204153 9.9776998 13.4277982 13.9250106 9.7715169 11.1087360 13.1048038 12.3391445 9.8989472 6.9876813 -0.7161967 8.0911323 10.8860122 11.4103204 10.1079405 9.2071049 14.5553100 9.0403336 4.5317058 10.3831250 9.2437793 11.0589349 3.9842156 5.5221813 10.9010151 5.6057047 4.0651328 10.8642714 4.9276358 5.6590768 10.9816137 9.2970999 9.7016298 8.2218867 7.3525555 12.4565173 3.9842156 13.9890706 10.0634966 9.8668601 9.6017552 12.6020376 8.7826264 10.7462796 11.0771774 9.0269287 1.6056840 7.6649955 8.3249298 10.2581918 3.6760981 11.2640954 5.5221813 11.4601063 10.0527886 7.7079437 15.2747008 10.0235580 10.2004032 12.6280732 9.9226657 -0.7161967 -1.7164338 11.7612826 10.1417583 10.9314606 TCGA-A2-A1FW 62 0 NA 528 breast stage iiia t3 n2a m0 female 2010 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino NA NA 1 2 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352509e-06 7.976338e-07 25.3968253968254 17.4603174603175 3.17460317460317 28.5714285714286 25.3968253968254 11.6348925 10.8837690 12.4010922 10.2636045 8.8055653 8.6221840 10.9829120 10.3326169 8.3172652 14.0775606 12.1813881 11.5416216 -0.7529232 11.5355779 4.9475820 7.3530533 6.2071471 9.1947812 9.0136733 13.7934058 5.2915373 14.7376349 1.8321204 9.2113914 12.3577908 8.2129287 2.2471376 8.5186075 10.5299432 7.9406313 9.3299586 6.6351623 0.2471984 4.6394637 10.9462830 10.2453822 10.2583717 9.8828625 10.3667340 12.0758759 7.4245636 11.0492568 13.6803386 11.0009649 10.5869916 12.2679507 12.3242104 4.5869929 6.8728534 10.2973331 10.8997654 -1.7529232 11.2846913 7.7167865 5.3024251 3.9195689 10.8860328 12.4964801 9.7529559 10.2531197 13.0420679 7.8636932 11.2235295 10.8105790 11.3527256 11.9302486 5.7147511 12.4475066 12.2775529 -1.7529232 10.0095265 9.8521609 2.7775986 5.6394608 11.0762725 9.9388880 10.4079612 10.8393678 3.5690779 9.0561085 11.4996620 10.6859362 10.2439709 9.2414977 1.738600 -0.193870 0.169260 0.166640 0.231790 0.179200 0.197860 -0.272620 -1.240100 -0.246670 1.927200 -0.278580 1.144200 1.013400 1.325100 -0.224530 0.407440 0.628250 -0.254310 0.212530 0.188590 -0.304510 -0.782690 3.656900 -0.311670 -0.311670 -0.311670 1.211400 -0.291770 -0.244280 -0.239600 0.089468 -0.239850 0.256680 0.621250 0.172570 0.197860 -0.272620 -0.272240 0.665120 -0.747770 -1.292900 -0.285010 -0.269850 -0.276070 0.132430 0.196190 -0.293670 1.013400 1.325100 -0.312650 -0.312650 0.407440 0.628250 0.595490 -0.254310 0.117260 0.117260 0.195120 0.158610 -0.315990 -0.782690 -0.276670 -0.311670 -0.311670 3.656900 -0.335200 -0.308140 -0.298630 -0.264 -0.264 0.780 -0.233 0.407 0.595 0.284 0.117 0.189 0.170 0.170 -0.316 -0.316 -0.154 -0.277 -0.312 -0.312 -0.235 -0.235 1.211 1.211 -0.335 -0.308 -0.256 -0.256 0.167 0.167 -0.191 -0.191 0.168 0.168 -0.071 -0.256 -0.112 -0.727 -1.293 1.252 -0.276 -0.276 0.000 0.000 -0.264 -0.264 0.780 -0.233 0.407 0.595 0.284 0.117 0.189 0.170 0.170 -0.316 -0.316 -0.154 -0.277 -0.312 -0.312 -0.235 -0.235 1.211 1.211 -0.335 -0.308 -0.256 -0.256 0.167 0.167 -0.191 -0.191 0.168 0.168 -0.071 -0.256 -0.112 -0.727 -1.293 1.252 -0.276 -0.276 0.000 0.000 8.2258548 -0.7529232 3.8017381 9.5480690 12.5403286 6.0530809 11.6663146 10.6797620 7.7369924 2.4950811 10.7284393 11.4536734 2.7707022 0.8321204 2.6394637 8.7127106 7.6713104 9.3911652 11.2390205 11.5309562 9.0301427 2.5690779 8.6265227 10.1351266 5.9818549 6.0415606 -0.1679607 NA 10.4944786 9.5858808 6.4419017 7.1175091 4.1051249 10.0806750 10.4003797 4.4170694 7.3764276 -1.7529232 7.1297879 12.2795346 8.2750504 5.2471452 -1.7529232 5.1896585 7.4394370 -1.7529232 4.2695120 NA 4.5509253 4.7763409 1.0545012 10.4388205 -1.7529232 7.9613901 10.4375864 10.1782513 3.5690779 9.4873394 12.8300508 8.1175091 3.3346112 5.6817725 11.3464922 -0.1679607 -1.7529232 0.8321204 -0.7529232 15.367483 5.166008 8.726925 11.535578 10.504019 10.034639 13.793406 14.651804 9.049661 11.774844 13.597393 11.130742 10.297333 4.988612 2.054501 9.271591 11.895277 11.6638100 12.2643878 10.2304944 12.8506537 8.5701992 5.5958736 10.6016693 8.3621880 11.1617949 5.4759636 11.0217256 12.1813881 4.6046941 -1.7529232 11.4371233 2.7065748 8.1343652 12.1373136 10.3135700 11.0215196 9.4873394 9.6581256 10.4455894 5.0153281 14.5363751 10.2583717 10.4690336 10.4953685 12.2094982 7.8855805 8.4170694 10.7588970 9.6096362 0.2471984 8.5998719 8.4960325 10.8997654 7.1984293 11.2846913 6.3712661 11.1903918 10.8860328 7.4687316 13.4374321 10.1708433 9.9881900 11.9553661 10.3186068 1.2471376 NA 10.9570898 11.1881920 10.5463524 TCGA-A2-A1FX 61 0 NA 1847 breast stage iiia t3 n2a m0 female 2008 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 1 1 2 2 1 1 3 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 26.3157894736842 31.5789473684211 0 21.0526315789474 21.0526315789474 10.017303 10.313442 11.258209 9.424212 8.625079 8.545757 9.867685 9.302038 10.283350 12.617515 9.552016 10.437796 1.815739 12.302424 3.022190 9.452926 6.075306 8.623099 7.921048 12.480055 1.700262 13.836377 2.574731 10.296012 11.322471 7.796543 NA 8.413367 9.558248 1.437228 8.719858 6.893382 NA 3.700262 9.860138 10.371808 10.164813 11.342469 9.062211 11.262668 1.285225 10.548890 14.913650 7.238003 9.731853 11.798738 11.148899 3.948199 3.400702 9.097585 12.684092 -1.884700 10.675876 6.932288 6.208061 4.922659 11.076392 11.747845 10.121981 10.848532 12.542093 8.265051 10.344424 9.866095 10.946414 10.992205 5.202766 11.156964 12.609160 NA 10.226440 9.605654 4.456754 6.016171 11.164472 9.966663 10.911344 10.429888 7.490344 5.707762 12.394842 10.574224 10.104344 8.963927 0.7545200 -0.3805500 0.0065811 -0.0055746 0.0197830 0.2093200 1.1346000 -0.6991000 1.1154000 1.1154000 1.1154000 -0.2469100 -0.2469100 0.4939600 3.4080000 2.2196000 -0.0012473 0.0072217 -0.0368100 0.0241270 0.0000000 0.1448800 0.1448800 0.1448800 -0.0850590 -0.0850590 -0.0850590 0.4437600 -0.3750400 -0.3645400 -0.2980400 0.0065811 0.0197830 0.0197830 0.2093200 0.2093200 1.1346000 -0.6991000 -0.7429400 -0.0343590 -0.0055027 -0.7135500 -0.6995600 -0.6987500 -0.6987500 -0.7676000 -0.2469100 -0.2469100 0.4679300 -1.2381000 -0.7024800 -0.7219000 -0.0012473 0.0072217 0.0072217 -0.0368100 0.0171800 0.0171800 0.0000000 -0.7796500 0.1448800 0.1448800 -0.5956500 -0.0850590 -0.0850590 0.4437600 0.0210430 -0.0353120 -0.0133610 -0.247 -0.247 -0.210 -0.678 0.000 0.000 0.000 0.000 0.000 -0.205 -0.703 0.145 0.145 -0.596 -0.596 0.000 0.000 -0.336 -0.336 0.444 0.444 0.000 0.000 -0.298 -0.298 0.000 0.000 0.000 0.000 0.209 0.209 1.113 0.431 0.000 0.000 -0.714 0.402 -0.699 -0.699 0.000 0.000 -0.247 -0.247 -0.210 -0.678 0.000 0.000 0.000 0.000 0.000 -0.205 -0.703 0.145 0.145 -0.596 -0.596 0.000 0.000 -0.336 -0.336 0.444 0.444 0.000 0.000 -0.298 -0.298 0.000 0.000 0.000 0.000 0.209 0.209 1.113 0.431 0.000 0.000 -0.714 0.402 -0.699 -0.699 0.000 0.000 8.5278742 -1.8847004 4.7877302 10.2120195 11.3221661 7.2511680 10.8057390 9.2406533 9.0491573 3.5747313 11.4880335 11.3276047 8.5644529 1.2852246 4.2650543 8.1445915 4.4007087 9.6369048 10.4783440 10.7755232 8.7833031 1.2852246 7.6486344 9.9592255 6.2445884 4.4372344 NA NA 10.7398714 6.5204458 5.5076234 8.7355242 5.9918211 10.2326910 10.7715058 6.5747358 9.2908540 -0.2997379 6.9418528 12.3573620 8.6612340 7.7859605 0.4372277 6.1867660 8.7364405 2.8157394 5.0578185 -1.8847004 4.9226593 3.9989266 2.2852246 10.7166110 -1.8847004 8.0489952 11.0612969 9.8764401 4.8295502 9.5762721 12.5468020 8.2199032 6.7877302 3.3632272 12.5616770 4.8432251 NA 0.7002621 0.7002621 15.114625 5.638867 8.871026 12.302424 10.064402 9.461264 12.480055 12.015700 10.528668 10.680168 12.704487 10.749435 9.097585 8.537369 1.922655 7.384432 11.753288 10.5062794 12.0616624 7.4903439 14.0676582 8.4247806 5.3537079 9.1223316 9.9374768 9.2158484 7.0251972 9.6437584 9.5520160 7.2133366 -0.2997379 11.0206914 3.4728516 7.8535828 10.9664678 8.8626581 10.7710587 10.3335650 9.3602629 11.5191153 4.8157445 10.0768300 10.1648127 10.3522155 9.5246953 10.9137762 9.9879794 11.0782004 9.8432248 8.5225721 NA 8.5598742 7.1068267 12.6840918 3.9481990 10.6758761 6.1096573 10.2257878 11.0763923 7.7152173 13.1308937 10.1376722 9.9330875 12.0695916 9.9572618 -1.8847004 4.0221991 11.7265598 10.3721028 8.9918214 TCGA-A2-A1FZ 63 0 NA 683 breast stage iia t2 n0 (i-) m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 5 5 3 6 4 5 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.733986e-07 14.2857142857143 14.2857142857143 4.76190476190476 28.5714285714286 38.0952380952381 10.267395 10.346086 12.267758 9.712624 8.009871 8.638175 10.764673 10.234082 10.155666 14.141468 10.170244 10.983286 1.534161 13.083991 4.311743 9.246419 7.356139 8.296638 9.403621 13.526267 2.048724 13.834939 6.030563 9.295119 11.000287 7.478326 NA 9.223636 10.361140 4.749148 7.300429 8.112645 NA 4.250348 10.251324 11.003779 11.229614 12.353746 10.493311 11.755897 1.311736 12.185445 15.292628 9.123730 9.531720 11.826130 11.616857 4.771178 4.218634 9.471616 11.478117 NA 11.096380 5.454702 6.075511 5.835308 10.793881 11.627083 10.264486 12.483339 13.077722 9.148847 11.201502 10.612242 11.702093 11.024272 5.370639 12.781472 11.238782 NA 10.337807 8.816895 3.214778 5.945952 10.815239 10.499097 9.753997 9.923999 2.427231 9.628404 13.811300 11.509371 10.149373 9.818218 0.83764000 0.83930000 0.85087000 0.83923000 -0.00940460 -0.00733390 -0.00802440 -0.00802440 0.00360760 0.00360760 -0.01157600 0.00013863 0.00458000 0.00078704 0.00263570 0.00263570 -0.00332430 -0.00332430 -0.00470790 0.00000000 0.00610900 0.02132300 0.00388540 0.00388540 0.01628600 0.01628600 0.01628600 0.01084200 0.00388540 0.00388540 0.01377200 -0.46142000 -0.00940460 -0.00940460 -0.00733390 -0.00733390 0.00875280 -0.00802440 -0.00802440 -0.00470790 -0.00470790 0.00360760 -0.00221680 -0.00221680 0.00583090 0.00583090 0.00458000 0.00458000 0.00694350 0.00263570 0.00263570 0.00263570 -0.00332430 -0.00332430 0.01670500 -0.00470790 0.00000000 0.00000000 0.00805670 0.01950300 0.02132300 0.00388540 -0.00277070 0.01670500 0.01628600 0.01084200 0.00355520 0.02525000 0.02525000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.834 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.832 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.834 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.832 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1697261 1.7267876 6.3849944 10.4854222 10.8115909 6.9858192 11.5851521 9.8516663 8.8274450 3.4816735 11.8985848 11.3660870 3.3117501 6.4547023 3.6336753 8.4220109 3.9747128 9.6456458 11.5718805 11.1815959 9.4401690 7.1530473 7.7574493 10.3345752 6.6456455 9.0788260 -0.2731688 -1.2733431 10.9184587 5.9459518 6.1614101 8.0487108 6.4202702 10.5286243 10.4350043 6.0305634 8.4254870 NA 8.0732965 12.3243696 8.1255261 7.2736772 -1.2733431 6.0121843 8.4783267 2.6336637 3.3117501 -0.2731688 4.9556011 5.7438138 3.2503401 9.9048249 0.3117356 8.9398868 10.0582594 9.6253839 4.4547023 10.3916742 12.0666325 9.6314172 4.1530433 4.3414948 11.0699682 1.3117356 -1.2733431 2.9747128 2.6336637 13.0396194 5.6692961 8.3561390 13.0839909 10.3957118 10.6674632 13.5262665 12.2311050 9.3051552 11.0613351 13.4069772 9.9459510 9.4716163 9.1923490 0.3117356 7.2266280 10.9903452 11.194643 11.774758 7.296638 13.451293 9.024845 6.234578 8.688232 8.483339 10.130285 7.066633 8.334113 10.170244 6.434141 3.311750 11.338960 5.621601 7.405629 12.043064 9.980039 10.689317 7.587870 8.009871 13.634894 5.218634 11.607831 11.229614 9.933797 9.673689 11.507732 10.211102 8.984170 10.911348 9.672226 3.896708 9.419119 7.038622 11.478117 5.030561 11.096380 7.732407 10.870485 10.793881 7.423750 13.131591 10.107244 10.365671 13.130394 10.567167 1.048724 NA 10.742198 10.610953 9.765016 TCGA-A2-A1G0 49 0 NA 616 breast stage iib t2 n1a m0 female 2010 NA yes other, specify 2 white not hispanic or latino NA NA 5 1 2 2 3 4 4 4 6 3 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 6.935946e-08 16.6666666666667 22.2222222222222 0 38.8888888888889 22.2222222222222 11.09606968 10.61686905 12.71331081 10.15943682 8.72028531 8.74702312 11.37333283 9.52361860 9.36436647 13.22495027 11.46022765 10.60838790 1.85439468 14.20331562 3.85441463 9.39357022 7.19588005 9.01244744 9.69132251 12.65898253 2.30188025 13.60523263 4.62379664 8.89424785 11.26976914 4.39498051 NA 11.55882606 7.36939407 4.03884000 8.28676335 7.95340028 -0.02004784 5.76130123 10.21076338 10.67835762 8.60321425 13.36153036 10.30412289 11.33253760 7.34042340 11.81520327 14.26134116 8.94732221 10.35461965 11.47179545 12.01920415 5.10922682 2.56491466 9.52297417 12.70608953 -1.60515664 10.98650217 5.87879644 6.90673309 4.88683300 10.47546432 12.11501028 10.90895413 13.88633192 13.15834785 7.53197090 11.05698053 10.77381654 11.16275051 12.07929017 5.64290658 11.81638727 12.28970291 -1.60515664 10.29282534 9.98743684 3.75604120 6.50872179 10.21276301 10.59096713 10.70984624 10.76157525 3.64290947 8.79051402 13.33377837 12.07621826 10.25529088 9.36004268 0.4768400 0.4584400 -0.0204120 -0.0204120 0.4424000 0.4653600 -0.0216470 -0.0216470 0.9569600 0.9569600 0.9314200 -0.0041546 -0.0117310 -0.0203100 -0.0143660 -0.0143660 -0.0129890 -0.0129890 -0.0260300 -0.0076101 0.0091705 -0.4940200 0.5077600 0.5077600 0.4429100 0.5129800 0.5129800 0.4959700 0.4768400 0.4768400 0.0000000 -0.0204120 0.4424000 0.4424000 0.4601500 0.4601500 -0.0216470 -0.0216470 -0.0283820 0.4629700 -0.5144500 0.9569600 -0.0099498 -0.0099498 -0.0099498 0.0116060 -0.0117310 -0.0033243 -0.0203100 -0.0143660 -0.0143660 0.4892300 -0.0129890 -0.0129890 -0.0129890 -0.0260300 -0.0076101 -0.0076101 0.0091705 -0.5493600 -0.4940200 0.5077600 -0.0036011 -0.4682300 0.5129800 0.4959700 -0.0077482 0.5309900 0.4069400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.495 -0.014 -0.494 0.508 0.000 0.000 0.000 0.446 0.477 0.477 0.496 0.496 0.000 -0.492 0.000 0.000 0.000 0.000 0.442 0.442 0.460 0.460 0.000 0.000 0.463 0.463 0.931 0.931 0.000 0.000 0.173 0.173 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.495 -0.014 -0.494 0.508 0.000 0.000 0.000 0.446 0.477 0.477 0.496 0.496 0.000 -0.492 0.000 0.000 0.000 0.000 0.442 0.442 0.460 0.460 0.000 0.000 0.463 0.463 0.931 0.931 0.000 0.000 0.173 0.173 7.64764550 NA 4.66176670 9.98837098 11.94295883 7.58673022 11.42063851 9.74531684 8.41534883 4.58480620 10.75555259 11.17821548 4.43937713 4.27762031 4.64290947 7.77652252 4.17633873 9.63934360 11.53931946 10.79345635 8.78944268 1.56491466 7.93025537 10.07225898 7.26225837 6.74812709 -0.60493720 NA 10.94980848 6.39498051 7.04961552 8.36508578 7.33455934 10.26683116 10.76157525 5.98743684 8.25916607 -1.60515664 8.31235205 12.91890929 9.17551961 6.80437113 -1.60515664 8.21036305 8.42702574 3.52426431 3.68038062 2.30188025 5.87071240 6.78836989 3.94957228 9.85748218 -0.02004784 8.96293590 10.10277031 9.51910114 5.00968756 9.98930451 11.99454405 8.97146423 3.39498051 3.43937048 11.20213350 1.56491466 -0.60493720 0.97995216 2.48243529 13.668302 3.918539 9.829087 14.203316 10.452633 9.978063 12.658983 12.952743 9.465101 11.149450 13.729288 11.604129 9.522974 8.584804 1.202324 7.947649 11.710978 10.8188836 11.3271946 7.7258965 14.1736443 9.0594272 6.7169086 8.6535459 8.7359425 10.1865701 7.3374944 6.4982684 11.4602276 5.0531896 4.3257174 11.0816992 5.5848032 6.0368879 11.6495656 10.3205343 10.4747979 10.2856242 8.1262987 14.8827728 8.0041587 12.2745861 8.6032142 10.1224750 9.8686855 12.6780682 9.9278227 10.8316914 10.8521042 9.2420372 NA 8.6829461 7.3520823 12.7060895 8.5139210 10.9865022 7.0096898 10.8779894 10.4754643 7.6237988 13.9646818 10.4410807 10.3499032 13.3383646 9.2753286 4.3257174 0.3731749 11.2498482 10.7829971 10.0997481 TCGA-A2-A1G1 85 0 NA 584 breast stage iib t2 n1 m0 female 2010 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 4 4 4 3 5 5 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 5.548757e-07 3.121176e-07 20 16 4 36 24 10.3430522 10.2287195 11.0924219 10.8164337 8.0011396 9.2428621 9.0962310 10.9307601 10.3049989 14.4258737 10.3822092 10.4770819 2.7219194 17.4109290 2.9949417 8.7256682 7.2217621 8.3561222 6.4407346 6.0498420 -0.8630212 9.7129654 5.4130795 9.8494806 10.8565563 6.2084158 0.1369788 8.3267782 11.1029182 2.3848787 9.0034597 8.2164384 1.9442962 6.2244166 9.9289305 12.7253169 10.0907862 10.2134353 10.5577034 11.4863731 3.1369460 8.1662409 15.7260195 8.3945536 9.1048860 11.6360521 11.4910652 5.2968245 NA 9.8729326 11.1406472 NA 11.1816892 5.4856812 7.5271227 7.3801277 10.5754855 12.1051704 10.4266843 12.0495623 12.9159547 6.7143829 11.0689838 10.5095984 11.0176851 11.2087511 5.4856812 12.1332505 7.3872522 -0.2780587 10.5681900 10.1714086 2.4624712 6.4037398 9.0050044 10.9428990 10.2107605 10.4647869 3.2662318 4.5632192 13.3731921 11.9274039 10.0613950 8.6035399 0.0975420 0.4069400 -0.2265000 0.1290400 -0.2321400 0.1536700 0.0790150 0.5001200 0.4951000 0.4951000 3.0662000 0.3952900 -0.2690100 0.1300700 0.1300700 0.1300700 2.0626000 0.0051359 0.1104400 -0.2246500 -0.2366700 -0.2454500 3.6569000 -0.2446000 0.2288500 3.6569000 -0.2611900 0.2367400 -0.2466700 0.0975420 -0.2188500 -0.2265000 -0.2368000 -0.2301500 -0.2332500 -0.2332500 0.0790150 0.5001200 0.5001200 -0.2331200 -0.2182400 0.4302400 -0.2331200 -0.2331200 -0.2362300 -0.2362300 -0.2690100 -0.2690100 0.1300700 0.1300700 0.1300700 0.1300700 2.0039000 0.0051359 0.0051359 0.1283000 -0.2358200 -0.2400700 -0.2409500 -0.0193140 -0.2454500 -0.2498200 -0.2354500 0.4111100 -0.2611900 0.2200600 0.1110000 0.1547200 0.1439900 0.112 -0.269 0.130 0.130 2.047 2.047 0.110 -0.236 -0.237 0.000 0.000 -0.245 -0.245 -0.232 -0.232 3.657 -0.261 0.000 0.000 0.237 0.237 0.111 0.124 0.159 0.159 -0.097 0.129 -0.232 -0.232 -0.080 -0.233 0.000 0.421 -0.233 -0.233 0.495 0.495 -0.236 -0.236 0.000 0.000 0.112 -0.269 0.130 0.130 2.047 2.047 0.110 -0.236 -0.237 0.000 0.000 -0.245 -0.245 -0.232 -0.232 3.657 -0.261 0.000 0.000 0.237 0.237 0.111 0.124 0.159 0.159 -0.097 0.129 -0.232 -0.232 -0.080 -0.233 0.000 0.421 -0.233 -0.233 0.495 0.495 -0.236 -0.236 0.000 0.000 7.5819688 NA 4.5963866 9.3439678 11.2493931 4.5514299 9.3181058 9.9026790 7.4226796 -0.2780587 11.9371457 12.7572130 0.4589069 NA 3.1369460 9.5217374 4.2867038 11.5475375 11.8960095 10.4240888 8.8985050 -1.8630212 8.4532352 9.9166729 7.0765324 3.6605180 6.6004779 -1.8630212 10.5889374 2.2244108 7.2558944 8.6496941 4.3657695 9.6303088 10.5222768 4.1593224 7.5442211 2.5292712 7.6025200 13.1810488 7.3093809 8.4712269 0.4589069 8.7681307 7.5943343 2.7219194 2.4588807 1.5963627 6.4407346 4.7668919 3.3464038 11.0578646 0.7219413 10.6862570 10.3326334 10.6285562 6.3705741 10.7658548 13.8524330 8.2993450 4.9183147 4.0911497 10.3372392 3.3068747 -1.8630212 -0.2780587 1.1369788 12.810106 10.750513 8.174501 17.410929 10.507167 11.172955 6.049842 9.096231 9.544221 12.455779 13.261196 11.272983 9.872933 9.394341 2.306875 7.998040 10.499445 10.4321486 10.7368665 4.7516619 14.4516066 9.4469983 7.0468468 8.7844120 9.3984609 8.8805848 6.6086289 5.1142337 10.3822092 9.6392882 2.9443150 11.3813174 9.5442215 8.9137239 13.0625544 11.7856482 10.4072490 8.3825064 7.3681747 10.4122052 8.4645061 11.5408724 10.0907862 10.1284754 9.8826279 12.8685908 9.7681307 12.1948607 10.6340569 10.3149959 -1.8630212 9.1406754 8.0969555 11.1406472 8.3451879 11.1816892 8.1099335 10.0275979 10.5754855 7.7903003 14.7239106 10.3075047 10.8155537 13.3813546 11.1178072 4.0676903 -0.2780587 11.3236869 10.2124328 9.3494500 TCGA-A2-A1G4 71 0 NA 595 breast stage iiia t3 n1a m0 female 2010 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 3 2 2 2 1 1 5 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 3.467973e-07 15.625 18.75 0 25 40.625 10.6946016 9.7782561 12.3906484 10.4593080 8.2253550 8.8286960 10.7276220 10.4909742 8.1632647 13.0599590 12.3380091 11.1880496 -0.2824387 11.8504883 3.1769929 9.3420511 7.0514613 8.8182227 10.1311882 13.3692473 1.5920144 14.1228125 0.4544918 8.8444883 11.8149340 7.4386596 -1.8672258 10.0198184 9.7605874 0.7175613 8.5356098 7.8468430 NA 5.3710012 10.3441818 11.1164820 9.6654406 13.5991203 10.5254517 12.3161555 15.9075906 12.5678773 14.4828463 8.5862284 9.5130588 12.3219590 11.9691412 4.3420498 5.4454817 9.1141650 10.8330374 -1.8672258 11.8335792 5.3224221 5.7100267 4.5588615 10.7603595 12.1574776 10.3611157 12.3163106 13.1526227 7.2094134 11.1836367 11.0395822 11.5064145 11.5971435 5.6244519 11.5933096 13.1296007 -0.8674890 10.0353497 9.6537073 2.6586685 5.9843478 9.9192757 11.0614862 10.6507591 10.3718978 1.5920144 10.7140336 13.9937573 9.8575379 10.3347216 9.1605038 -0.00972990 -0.01020500 -0.01805100 -0.01805100 -0.02367500 -0.01447600 -0.01530100 -0.01530100 3.65690000 3.65690000 0.69974000 0.00836280 0.00072466 0.00127570 2.10030000 -0.75278000 -0.00473480 -0.00473480 -0.02189400 0.00169190 0.01813100 0.01366000 0.01366000 0.01366000 0.01156700 0.01156700 0.01156700 0.01435800 0.02822800 -0.00972990 -0.00545990 -0.01805100 -0.02367500 -0.02367500 -0.01447600 -0.01447600 -0.01530100 -0.01530100 -0.01530100 0.68706000 0.68053000 -0.78174000 0.00321870 0.00321870 0.00321870 0.00321870 0.00000000 0.00794530 0.00127570 -0.77700000 -0.76499000 0.01352000 -0.00473480 -0.00473480 -0.00473480 -0.02189400 0.00169190 0.00169190 0.72455000 -0.77140000 -0.75396000 0.01366000 0.00335760 0.01156700 0.01156700 0.01435800 0.00780610 0.02977500 0.00995500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.657 0.000 0.000 -0.746 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.681 0.681 -0.782 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.657 0.000 0.000 -0.746 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.681 0.681 -0.782 3.657 0.000 0.000 0.000 0.000 8.2810741 NA 3.4901465 10.0121809 11.3990914 6.2972024 10.3864452 8.9858681 7.3527338 0.9399788 11.3565994 12.2642553 5.5163020 1.8330520 4.0394894 8.7988217 3.4545313 9.3662173 12.9368800 10.4682671 9.8265202 -1.8672258 7.7692223 9.9714076 6.6717562 5.6871867 1.1325768 NA 10.6453382 6.4901497 5.1098787 8.5216911 5.4180010 10.3706322 10.5446382 3.6561645 8.7997093 6.5961227 8.6804562 13.0958099 8.5776124 6.8468430 NA 3.4901465 8.2861497 NA 2.5249162 0.1326426 7.9123169 3.8075713 3.3025238 10.0014203 NA 7.8824670 10.4309467 9.7477675 4.5920264 8.2515387 11.5685283 7.2848824 0.4544918 2.3025238 13.3674900 2.0394894 NA 2.1326097 NA 15.854250 6.002963 8.929448 11.850488 10.511976 10.118084 13.369247 12.605860 8.311997 11.558207 12.410611 10.581230 9.114165 8.624451 -1.867226 7.174257 12.434380 11.032332 12.121549 7.307523 13.713325 9.068499 5.166020 8.974948 10.027415 10.330269 6.327355 7.612378 12.338009 6.235886 -0.867489 11.082424 10.420310 8.722633 11.515762 9.869000 10.975537 7.734368 8.402893 12.023432 6.691019 11.753888 9.665441 10.252187 8.667873 11.680095 9.566183 11.091513 11.043240 8.797045 NA 8.508929 6.086794 10.833037 7.941562 11.833579 5.380525 10.789023 10.760360 7.302523 13.813946 10.113094 9.623449 13.041084 10.896018 5.166020 1.302524 10.768316 10.828696 10.039864 TCGA-A2-A1G6 50 0 NA 501 breast stage iiia t2 n2a m0 female 2010 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 3 5 4 3 3 3 4 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 0 33.3333333333333 33.3333333333333 0 0 33.3333333333333 10.614445 9.710046 11.406813 9.238570 8.755850 9.227374 9.653210 10.191198 10.380701 13.961839 11.403264 11.004480 2.939565 12.462015 3.545277 10.157467 7.170887 9.359247 10.804555 12.556031 7.685127 12.549784 8.121632 10.011257 10.884114 4.088421 NA 8.607059 8.215281 3.842265 8.220131 8.806169 1.223361 4.248892 10.151556 9.890213 10.268919 11.072871 10.131104 11.401486 6.907853 11.939684 14.440533 8.380369 9.424428 11.449939 11.156413 5.875431 3.585924 9.065256 12.921501 -1.583809 11.589833 5.663928 6.273980 4.565749 10.726328 12.228177 10.109487 12.738139 12.893695 8.067051 11.227374 11.523888 11.505616 11.199816 4.719780 12.045015 11.468228 NA 10.226973 9.346737 4.323132 4.891735 10.887929 10.464146 10.421273 9.707170 6.015912 9.575871 14.135576 13.104742 10.150709 10.040795 0.00055459 0.00055459 -0.00041585 -0.00069303 -0.00027724 -0.00138580 0.00000000 0.00000000 -0.00110870 -0.00110870 -0.00110870 0.00082552 0.00471900 0.00263570 0.00263570 0.00263570 0.00000000 0.00000000 -0.00152430 0.00806550 0.00402430 -0.00083160 -0.00083160 -0.00083160 0.00249690 0.00249690 0.01544700 0.00194180 0.00471900 0.00471900 0.00694350 -0.00069303 -0.00027724 -0.00097017 -0.00138580 -0.00138580 0.00110930 0.00000000 0.00000000 -0.00843850 -0.00843850 -0.00110870 0.00263570 0.00263570 0.00263570 0.00263570 0.00471900 0.00471900 0.00263570 0.00263570 0.00263570 0.00263570 0.00000000 0.00000000 0.00000000 -0.00152430 0.00806550 0.01810300 0.00402430 -0.00441570 -0.00083160 -0.00083160 0.00402430 0.00249690 0.00249690 0.00194180 0.00458000 -0.01202400 -0.01202400 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.431414864 NA 5.985855596 10.336352463 10.962170645 6.340811479 10.214471397 9.825554942 8.118743856 5.585923977 11.993546469 10.801708359 3.322894377 2.585923977 4.438366049 8.503462435 3.322894377 9.282505831 11.394710054 10.675448649 9.116439358 2.737924668 7.816879336 10.518303405 6.600874814 8.095479837 -1.583808806 0.001009533 11.237972881 7.644818147 8.550425894 7.514031497 9.282505831 10.118172295 10.247306879 5.883606155 7.933668823 0.001009533 9.590925323 13.769663373 8.174222634 6.854791105 NA 2.223360763 8.339327154 1.415974946 3.460388726 2.503450509 5.471281772 4.370199162 4.116439618 9.970108767 4.116439618 11.642411825 10.813139450 9.939561585 4.393278899 9.729449615 11.409822566 9.680442162 2.000973491 3.116431300 11.965543659 -1.583808806 -1.583808806 0.001009533 2.223360763 11.435114 3.170886 8.719780 12.462015 10.411498 10.162514 12.556031 12.137206 9.390787 10.773277 13.025871 11.401486 9.065256 7.899815 -1.583809 8.345258 11.550105 11.0695165 11.3159229 6.6008748 13.5266856 9.3687409 7.4631238 9.2747576 7.6033519 10.2346577 6.1641929 7.6520139 11.4032636 5.4383660 2.9395651 10.9250323 6.6544040 5.0946330 11.9575803 10.6932870 10.6630371 8.9541885 7.8275104 10.8002437 7.4216239 12.5749721 10.2689191 10.7384911 9.6892125 11.7644512 10.3749148 10.3344902 10.5868636 8.6897954 NA 9.5040127 8.2033147 12.9215011 7.7513901 11.5898329 6.0813354 10.8366941 10.7263284 6.6448181 14.7569102 10.3989932 11.0623333 12.7538306 10.1916099 1.2233608 -0.5840251 10.5031310 10.0297891 9.8785019 TCGA-A2-A259 70 0 NA 1596 breast stage i t1c n0 (i-) m0 female 2007 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 3 5 4 3 3 4 3 8 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 6.935946e-08 16.6666666666667 25 0 41.6666666666667 16.6666666666667 11.2932204 10.2266170 11.8414797 10.5065927 7.7540169 8.4066604 9.9169958 9.7863922 9.1978681 13.4399522 11.2151483 10.3840033 0.6371929 11.8104555 3.6371581 9.8597065 6.3541436 9.0974043 7.9464022 12.2873971 4.0965823 13.3777772 5.2810083 8.7973875 11.1300077 7.2251178 NA 9.8613622 9.0268919 1.7746711 9.2518630 8.8348613 0.9001809 4.8850813 10.1249931 9.9622336 10.0887763 12.6273280 10.0717813 11.6814106 8.0949444 11.7083473 15.1279413 8.1612795 9.8673418 11.3703380 11.6262637 4.4445081 0.9001809 9.7346585 11.6420758 0.6371929 10.8409905 5.7828305 7.1544293 4.7075414 10.1685346 11.6451615 9.7853755 12.5572082 12.9672297 7.1669745 10.8108303 10.6242551 11.7549261 11.9222085 5.4851499 11.5631526 12.9936601 1.4851692 10.5428409 10.3933759 3.3622454 6.3973734 11.9679580 10.7240854 10.3309885 11.5122881 4.4445081 7.1825036 12.8253710 12.5432921 9.0965847 8.9527555 0.00694350 0.02763800 -0.00968060 -0.00968060 -0.01780300 0.00033809 0.00000000 0.00000000 -0.41135000 -0.41135000 1.70920000 -0.00830050 -0.00968060 -0.00207840 0.00027728 0.00027728 -0.16494000 0.00471900 -0.01216200 0.00388540 0.01558700 -0.26817000 -0.29508000 0.38700000 0.02496900 0.02496900 0.02496900 0.00777830 0.00694350 0.00694350 -0.00176490 -0.00968060 -0.01780300 -0.01780300 0.00033809 0.00033809 0.00000000 0.00000000 0.00000000 -0.00609040 -0.00609040 -0.41135000 -0.01287000 -0.01287000 -0.01287000 -0.00097017 -0.00968060 -0.00968060 -0.00207840 0.00027728 0.00027728 0.00027728 -0.16494000 0.00471900 0.00471900 -0.01216200 0.00388540 0.00388540 0.01558700 -0.42910000 -0.32170000 -0.29508000 0.00750000 0.02496900 0.02496900 0.00777830 0.00805670 -0.00227900 0.01516800 0.000 0.000 0.000 0.000 -0.140 0.000 0.000 0.000 0.000 0.825 -0.408 0.356 0.356 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.295 1.707 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.140 0.000 0.000 0.000 0.000 0.825 -0.408 0.356 0.356 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.295 1.707 0.000 0.000 0.000 0.000 8.54404367 NA 5.31522566 9.91699577 11.15501931 6.90663570 10.48483689 10.61728985 8.49708539 5.88508134 11.42636069 10.47538639 2.31521841 3.77466057 4.22211674 8.18558957 2.95908388 10.25993706 11.77375980 10.58347461 9.19557374 1.31521841 7.51734893 9.70700566 7.42896728 5.01566259 4.31522566 -0.68478159 11.11612494 6.90768146 6.96268320 8.72567641 6.35414357 10.25477484 10.00696852 3.63715810 7.63263757 -0.68478159 7.91327779 12.80344174 8.74881039 7.18250361 -0.09974179 6.14177405 7.46497206 5.81507070 4.52467804 0.63719289 6.17941152 5.59069782 3.52467804 10.68754593 2.01567597 9.44965133 10.77491280 9.87316724 5.69026343 9.71396863 12.51673635 8.44708199 2.22212447 3.92993299 12.02279983 0.90018091 0.63719289 -0.68478159 -0.09974179 13.368793 4.869812 8.697849 11.810455 10.173595 10.156789 12.287397 13.429130 9.100882 10.996024 13.102668 12.085166 9.734658 8.070112 1.122606 8.765405 11.933152 11.260486 11.804697 7.692436 13.639545 9.311699 6.911415 9.544645 7.109641 10.299850 7.116125 7.423750 11.215148 5.741489 5.281008 11.767080 6.332033 6.004176 11.930165 10.216469 10.527113 9.808990 8.631507 12.758816 7.070112 13.113436 10.088776 10.569073 9.458608 12.597517 10.475096 10.551239 10.710759 9.375245 NA 8.985447 8.522142 11.642076 7.312405 10.840990 6.846606 11.015881 10.168535 7.869814 13.962569 10.528025 10.259937 12.909783 9.981005 5.885081 3.194938 11.081754 10.586104 9.806577 TCGA-A2-A25A 44 0 NA 3276 breast stage iia t2 n0 (i-) m0 female 2003 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 4 3 3 3 4 3 6 2 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.635659e-06 6.242351e-07 5.20833333333333 35.4166666666667 14.5833333333333 41.6666666666667 3.125 10.8038006 10.0920772 11.7962880 9.6933103 8.3095009 9.4323262 9.9923277 10.2230355 10.3395637 11.4137659 11.3454765 10.7229931 4.0271806 11.5502022 3.6121519 10.2832625 5.8851668 9.3571057 10.1687244 12.0450758 3.2148087 13.2640627 7.2059877 9.3372169 10.3939927 7.5524877 0.4422269 12.2441879 9.5450730 2.5577042 7.8041659 8.2991663 0.8572644 6.3729591 10.1675886 10.5212626 9.7554833 11.9717342 9.7607652 11.4969397 4.0470846 10.1904152 14.6941978 8.1631278 9.9267096 11.1899957 10.9579221 5.5715039 4.3650556 9.5358599 12.5612715 -1.1427356 11.6905453 6.0371691 6.6020931 4.7641497 10.8214202 12.0493985 10.3573548 13.0455782 13.0246388 7.7291653 11.1465583 10.9714707 11.7676215 11.5572660 5.0764266 12.0116033 11.4135264 0.1791288 10.4254534 9.3105305 4.3003727 5.6320471 10.7680899 10.3408237 9.9155899 9.7066649 3.7641550 10.0199658 13.9053209 13.0006032 9.9852542 9.7535922 0.05346500 0.34730000 0.00000000 0.00000000 -0.00529390 -0.00622860 0.00847430 -0.34044000 -0.00332430 -0.00332430 -0.00332430 0.00610900 0.00610900 0.00485790 0.37693000 -0.00070621 -0.00439570 -0.00439570 -0.00470790 0.00180300 0.00402430 -0.29154000 -0.29154000 -0.29154000 0.02238900 0.02238900 0.02426800 0.00138680 0.05346500 0.05346500 -0.00871460 0.00000000 0.00861350 -0.00802440 -0.00622860 -0.00622860 0.00847430 -0.34044000 -0.35175000 0.03312700 -0.00136430 -0.00332430 0.00680440 0.00680440 0.00680440 0.00680440 0.00610900 0.00294620 0.00485790 0.00485790 0.00263570 0.00263570 -0.00439570 0.00235810 0.00235810 -0.00470790 0.00180300 0.00180300 0.00402430 -0.34200000 -0.29154000 -0.29154000 -0.02712400 0.04684200 0.02238900 0.00138680 0.01976000 -0.33629000 -0.33629000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.332 -0.292 -0.292 0.000 0.000 0.000 0.000 0.000 0.294 0.000 0.000 0.000 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.332 -0.292 -0.292 0.000 0.000 0.000 0.000 0.000 0.294 0.000 0.000 0.000 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1217024 5.5083114 6.4309075 10.5691419 10.9380773 6.6946351 10.5987268 10.4569937 8.4018378 4.5715069 11.9433131 10.8764561 3.5851789 -0.1427356 4.4866178 8.1633216 3.7399021 11.0622894 11.3106591 10.6724429 8.9865429 3.7641550 8.1415053 10.0968584 7.6303989 6.0956650 1.5576797 -1.1427356 11.8379350 8.8705826 7.6451627 7.9447226 7.9710020 10.0236332 10.4567078 5.7938985 8.4156805 -0.5578792 8.7894746 12.9600147 8.2719452 7.9644772 -1.1427356 3.0271894 8.1333842 1.1791925 5.0667135 -2.1430541 6.3370402 3.8160979 4.1791846 10.2525261 1.8572644 10.9868648 10.5127905 9.8316744 7.2192034 10.1675886 12.2217365 9.6905453 3.1426585 4.3166888 11.0122361 NA NA 0.8572644 1.8572644 12.7805367 5.1426626 8.3491131 11.5502022 10.3795962 10.2843108 12.0450758 12.5780385 9.2304893 10.9546336 13.6754425 11.3092436 9.5358599 8.8677881 -0.1427356 7.4327991 11.3679004 11.2970907 12.1108858 6.7641511 13.7029929 9.5047183 7.4938843 9.0962616 7.5851804 10.4264082 6.9579227 8.4829689 11.3454765 6.4384609 4.0271806 11.2081990 6.9071082 6.8293206 11.6551240 10.5161408 10.5949297 8.3459636 8.4738088 12.2095792 6.6581601 12.4453004 9.7554833 10.6738436 9.2934507 11.1106642 10.7650894 10.8749382 10.5785727 9.4562429 NA 9.3388424 8.2631354 12.5612715 7.1701424 11.6905453 7.9166044 11.1459846 10.8214202 7.3166915 14.4690915 10.2597390 10.7404759 12.5257571 10.6119386 3.4118465 0.4422269 10.5942959 10.2519904 9.8176239 TCGA-A2-A25B 39 0 NA 1291 breast stage iib t2 n1 m0 female 2010 NA yes infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 1 1 2 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.768666e-06 7.629541e-07 10.6666666666667 16 5.33333333333333 45.3333333333333 22.6666666666667 10.8892929 10.4147792 11.9764937 10.2461736 9.2449453 8.4500301 10.0062813 10.9483439 9.2457642 14.5590488 10.8795636 11.3475090 -1.5374241 11.5107420 4.2956569 7.0211865 6.6575228 8.5791100 9.4220435 13.2831944 2.1632089 13.9105273 -1.5374241 8.8679076 11.2004359 9.7195644 3.1066163 8.2604275 10.9982844 0.4627853 7.3994044 8.0626787 0.4627853 4.8721590 10.5791100 10.8095568 9.7931227 11.2443307 10.0714829 12.2412539 2.1632089 11.1376204 14.2032584 8.0824541 8.7981004 11.4382558 11.2982244 3.6722217 3.9221978 10.6261012 10.7183848 0.7846715 11.6858628 6.2375522 7.1562530 5.0477303 10.7662615 12.2050755 9.8864073 12.2064434 13.2644239 6.8378058 11.1000702 10.3867508 11.8792997 11.3072757 5.4052810 12.7177208 11.2600223 NA 10.1174021 9.8290883 2.5510730 6.7295528 10.8369905 10.6301842 11.5362382 10.5621139 5.0173563 8.2717301 12.4454923 11.2387878 9.5693289 8.9354568 0.8776700 1.8291000 -0.0645080 0.6753000 -0.4106800 1.2290000 0.5301100 -0.5474400 -0.3319100 -0.3240300 1.1910000 0.4809600 -0.1080200 -0.0865180 -0.1729700 -0.1729700 -0.4693500 0.5283600 -0.1706900 3.5906000 3.6569000 0.3445300 -0.5037000 3.6569000 -0.0358570 -0.0358570 -0.0358570 0.3810500 -0.1888600 -0.0280810 0.0879690 -0.0645080 0.0000000 0.1452600 0.0790340 -0.0861200 0.5122800 -0.5474400 -0.6008000 0.2466900 0.7081800 -0.0041546 -0.4947500 -0.4947500 0.3649300 0.3649300 -0.1080200 -0.4840700 -0.4389700 -0.1729700 -0.5342900 -0.5342900 -0.4693500 0.5283600 0.2500500 -0.0631660 -0.1143000 -0.1339900 -1.1841000 0.0751280 -0.5585700 -0.5037000 -0.5488500 -0.0358570 -0.0358570 0.0668020 -0.1628100 -0.5720900 -0.5720900 0.319 -0.162 -0.117 -0.117 -0.352 0.176 0.000 0.000 0.000 0.000 0.000 -0.504 -0.504 0.000 -0.102 0.000 0.000 0.211 0.211 0.000 0.314 -0.539 -0.572 -0.158 0.000 0.000 0.000 0.000 0.000 1.150 0.000 0.000 -0.547 0.247 0.247 0.000 0.789 -0.130 0.365 0.326 0.000 0.319 -0.162 -0.117 -0.117 -0.352 0.176 0.000 0.000 0.000 0.000 0.000 -0.504 -0.504 0.000 -0.102 0.000 0.000 0.211 0.211 0.000 0.314 -0.539 -0.572 -0.158 0.000 0.000 0.000 0.000 0.000 1.150 0.000 0.000 -0.547 0.247 0.247 0.000 0.789 -0.130 0.365 0.326 0.000 8.64143079 -1.53742411 6.22431816 9.67647793 12.74136072 7.39648662 10.07286817 9.18979318 8.04400443 NA 11.38739302 11.17312269 2.55023579 2.04771287 3.46277218 7.56605404 3.16320888 10.28214682 12.34464478 11.45357915 8.74932375 0.46278526 8.15101654 9.14663791 5.64267558 2.36966190 0.04767798 NA 10.57553131 7.51261485 6.59204884 7.64764118 3.50716035 9.81594041 10.33813144 3.10661633 8.04396671 NA 7.66978010 11.96049318 8.00579800 6.06267868 NA 1.78471336 8.63519354 -1.53742411 -1.53742411 -1.53742411 5.40528104 3.16763090 2.16320888 10.69428727 -1.53742411 8.73422898 10.45180569 10.23631741 3.82032195 9.16320586 13.12331914 8.45570449 4.21765726 2.36966190 11.44540320 2.92219785 NA -1.53742411 0.04767798 13.029257 5.217653 8.400876 11.510742 9.949601 10.625472 13.283194 17.107055 9.151016 10.765691 13.628419 10.576183 10.626101 9.768828 2.632687 10.141806 11.831273 11.0822983 12.1479529 7.4571198 13.3360655 8.9119147 5.1209781 9.2956560 8.1084246 11.4081934 6.2375522 8.5686744 10.8795636 5.2441259 NA 11.4835724 4.6915844 8.7707409 11.2592113 10.6655021 10.6587534 6.6770854 8.4486082 11.9147498 5.8806194 12.0120357 9.7931227 10.3480811 9.2588056 10.2021248 10.3199695 9.0057980 11.2075999 9.3176344 NA 8.1377704 8.5712904 10.7183848 6.2701215 11.6858628 9.1949336 10.9868180 10.7662615 7.4739930 13.5479895 10.5061352 9.9445655 12.1427959 10.4371807 2.0477129 0.7846715 11.1407059 10.6639711 10.0458488 TCGA-A2-A25C 50 0 NA 523 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 2 1 5 3 1 1 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.387189e-07 8.69565217391304 34.7826086956522 0 26.0869565217391 30.4347826086957 10.4845515 10.4934079 11.5546659 10.7326660 8.1411436 10.3143211 9.3299797 10.4825514 9.0653623 14.5139952 10.4039433 11.4603642 -0.1808223 12.8936080 4.4339276 8.8960311 5.5940021 8.7521685 11.5881236 13.3280627 2.4630731 13.0960307 6.9277400 9.4151863 10.9093280 10.0408027 0.8191777 10.4444678 10.9563669 3.4339209 7.0600074 7.5657297 NA 4.9891390 10.8795738 10.2365407 10.8057688 11.5439426 8.9172476 11.5345342 0.6265793 10.1977814 13.8361544 8.7684804 9.1264164 11.9586071 12.0066450 5.0286708 4.8636114 9.3359006 11.4410385 -1.1808223 11.7388239 7.1092341 6.3110689 5.1411426 11.5182458 12.0432173 10.4827737 12.8825264 13.5158300 7.5707597 10.5368921 10.3968380 12.1761490 10.8408896 5.4116737 11.8692343 9.4814388 -2.1804953 9.7181948 9.5330316 3.9730234 5.6329981 11.4782081 10.6239517 9.8318402 10.2029199 2.1411385 8.0766035 12.1906520 10.7056743 10.1773174 9.0712897 0.57202000 0.57202000 0.02314500 0.00694350 -0.59063000 0.01098200 0.54947000 -0.59440000 0.00875280 0.00875280 0.00875280 0.00402430 0.00402430 -0.00180140 -0.00180140 0.01363200 -0.61124000 -0.00470790 0.02890300 0.57113000 0.49217000 -0.03435900 -0.03435900 -0.03435900 -0.06450800 -0.06450800 -0.06450800 -0.02304700 -0.65724000 -0.60613000 0.00805670 0.02314500 -0.59063000 -0.57970000 0.02172200 0.02118300 0.54947000 -0.59440000 -0.64010000 0.00930980 -0.65305000 0.00875280 0.00000000 0.00000000 0.00000000 0.00000000 0.00402430 0.00402430 -0.00275410 -0.00180140 -0.61383000 -0.61383000 -0.61124000 -0.00470790 -0.00757570 -0.00581400 0.57113000 0.57113000 0.49217000 -0.00541740 -0.03861400 -0.03435900 -0.64355000 -0.06450800 -0.06450800 -0.02808100 -0.00027724 -0.03313200 -0.66661000 0.000 0.000 0.000 0.000 -0.607 0.000 0.000 0.571 0.492 0.000 0.000 0.000 0.000 -0.605 -0.605 0.000 0.000 -0.606 0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.591 -0.591 0.000 0.000 0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.607 0.000 0.000 0.571 0.492 0.000 0.000 0.000 0.000 -0.605 -0.605 0.000 0.000 -0.606 0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.591 -0.591 0.000 0.000 0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.0606030 NA 5.2286071 9.9391294 11.8934407 5.9086400 10.8534987 9.2324732 8.7002684 1.5196425 11.8265057 10.5143221 6.4412677 -1.1808223 4.6393943 8.6505230 3.8415807 11.0204206 11.6548713 11.5563573 9.2349573 0.6265793 7.9828653 9.2847820 6.9013641 4.8192134 4.5741015 -2.1804953 11.4293177 7.3738048 9.3220473 7.9484986 4.8192134 9.4405899 10.8778839 5.0576192 7.8290440 -2.1804953 8.4485723 11.4356496 8.2339010 6.8360238 -2.1804953 1.7260901 8.8036342 NA 3.8636114 -2.1804953 5.8415832 3.3177816 3.4041810 10.2984906 -1.1808223 7.7821117 11.0902409 10.0706980 4.1942526 9.2837614 14.0955945 8.2755700 3.4916351 4.3270118 11.0045557 3.0671396 -0.5957508 4.2949515 NA 12.7636806 6.5092129 7.9394535 12.8936080 10.6810876 11.0656593 13.3280627 12.9690024 9.4903144 10.7598614 13.0591870 9.9504295 9.3359006 9.9198780 -0.5957508 7.4246954 12.2590465 11.148451 12.750461 6.400417 12.894860 8.536035 6.422842 9.367556 9.906347 10.765360 7.189903 9.991643 10.403943 4.491641 3.404181 11.827382 7.864975 8.192244 10.677002 10.861046 12.002463 8.512616 8.301015 13.150692 6.480994 10.989031 10.805769 10.609157 9.301519 10.810915 9.587814 10.461493 10.822382 9.225952 NA 9.094176 6.946282 11.441039 6.943336 11.738824 8.136628 10.069218 11.518246 7.165729 12.582791 9.793989 9.703768 12.624657 9.733227 2.067157 1.726090 10.498256 11.944791 9.772685 TCGA-A2-A25D 90 0 NA 552 breast stage iiic t2 n3a m0 female 2010 NA yes infiltrating lobular carcinoma 22 white not hispanic or latino NA NA 5 2 1 2 7 4 1 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.144431e-06 5.201959e-07 12.5 25 4.16666666666667 29.1666666666667 29.1666666666667 9.5540393 9.0459248 11.4655027 8.3367538 9.2953835 9.3452254 10.2116864 9.2617691 10.8606851 7.7795605 11.0226108 10.2328419 1.1920679 13.2295281 2.0665714 8.5200222 7.2653450 8.7808101 11.0818530 11.5443229 1.9290714 12.8743587 2.9994589 9.0818530 10.2360343 7.5729177 2.1920995 10.0726995 9.1424086 0.6071054 8.4080329 6.6569811 NA 3.9994499 9.4604426 9.5467124 8.9414063 10.3782099 9.7299611 10.4732529 0.1920679 10.3376032 14.6588943 6.0380037 10.4419991 10.5718349 10.1365636 3.9646851 0.6071054 8.7351275 10.2559401 -1.3928946 10.5714739 6.9865111 6.8550603 5.0500750 9.7969577 12.0828665 10.4201125 10.9840724 12.6223739 8.2346670 10.1024885 9.4937900 10.6985685 10.2005242 3.6945905 11.8191734 12.5544047 2.5140212 9.9536468 8.9919169 2.5255177 6.6071335 10.1741385 9.4604426 10.7035188 9.8580236 3.7770620 8.4305002 12.6199322 11.9983767 9.7826826 9.0048078 -0.01312700 1.42670000 -0.03735400 0.47324000 -0.01147300 -0.54037000 0.55478000 -0.00221680 1.00690000 0.51333000 1.37570000 0.00263570 0.00763920 0.00194180 -0.00954260 0.00000000 -0.02137300 -0.02137300 -0.51716000 0.04075100 0.00402430 -0.52951000 -0.00221680 0.52083000 0.00305220 0.00305220 0.51333000 0.01349200 -0.55246000 0.01558700 -0.00761010 -0.04188300 -0.04955900 -0.00912860 -0.01023200 -0.00456950 0.55478000 -0.52399000 -0.54209000 0.01251600 -0.00526100 -0.53916000 0.52888000 0.51054000 0.00917050 0.04584900 0.00763920 0.02118300 0.00194180 -0.00954260 0.00124810 0.00124810 -0.02137300 -0.02137300 -0.02479800 0.02553100 -0.00830050 0.00875280 0.00402430 -0.55957000 -0.52951000 -0.03395000 -0.45110000 -0.53002000 0.00305220 -0.00013862 0.01586600 -0.00526100 0.01950300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.496 0.521 -0.370 -0.370 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.539 1.555 0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.496 0.521 -0.370 -0.370 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.539 1.555 0.501 0.000 0.000 0.000 8.8238789 5.7051651 5.6405573 10.3582587 11.6334836 8.2631645 10.1612423 9.1739482 8.8935755 4.4897741 12.3127655 11.5310455 4.2795604 2.3075742 2.6071291 6.8739202 4.4144874 11.5783174 11.4299031 10.3674372 10.1583606 1.4145144 8.1049850 10.7833062 8.7994260 6.3350544 -1.3928946 NA 10.8175000 6.5140244 5.5496476 9.0828665 6.1306941 10.0944104 9.4193103 3.4144874 9.4541905 -1.3928946 6.8311349 13.4484026 8.1712824 8.8704023 0.6071054 -0.3928946 9.7018706 3.5140212 4.5613322 NA 7.9063411 4.7854512 4.2509919 10.8317378 0.1920679 8.7454047 10.2328419 10.1722352 6.3486007 10.4297039 13.7041776 8.9503188 4.7770567 5.1306962 9.9827156 0.9290335 -1.3928946 -1.3928946 -0.3928946 11.3733245 4.8739214 9.1385145 13.2295281 9.7901481 11.7640062 11.5443229 11.6241154 9.3396567 10.4581012 12.8974400 12.8984477 8.7351275 7.7920087 0.6071054 7.4867160 10.8867437 10.9450337 12.2292993 6.2144629 13.4252149 8.7770580 7.7568805 9.2107595 7.9290613 9.9854821 7.9063411 6.6998903 11.0226108 5.7466836 0.1920679 10.6769185 3.8165895 7.8944528 11.0979840 10.6902799 10.0823598 8.4092615 9.1297147 10.3847994 7.5019510 12.9238714 8.9414063 10.7935569 10.0904450 10.5140237 9.5064901 10.5750798 10.3324994 8.4958762 NA 9.3133787 7.8372495 10.2559401 7.5642349 10.5714739 3.5613261 11.1250485 9.7969577 7.2689115 14.9791139 10.1793596 10.8954224 12.5523940 10.1394891 6.1995899 2.4144874 9.7720400 9.7064808 9.3561645 TCGA-A2-A25E 34 0 NA 3204 breast stage iiia t2 n2a m0 female 2004 NA yes infiltrating ductal carcinoma 6 black or african american not hispanic or latino NA NA 1 1 4 3 1 1 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 2.774378e-07 6.52173913043478 13.0434782608696 10.8695652173913 41.304347826087 28.2608695652174 10.05506073 9.96260498 11.61391683 9.18817662 9.14475433 9.54346959 9.96986163 10.50058508 9.17253752 14.86489606 10.30035977 10.75828610 -0.08405849 12.81900162 4.08585801 7.43163549 6.21971645 8.38896485 8.74882582 13.01605050 1.08583252 13.06969886 3.88556460 9.85060942 10.95165124 8.78732765 NA 10.27641710 9.36852021 1.13835577 8.36577214 6.87013165 -0.66909746 3.46025765 9.91264463 10.71710514 10.17959614 10.10534847 9.32956361 11.16998017 2.13832300 11.02967788 13.84392970 7.92513010 10.45832274 11.77508224 11.27073607 3.33097423 5.97482984 8.99897171 10.08502557 NA 11.49682238 4.68852728 5.87786692 4.55979158 9.71197527 11.94660287 9.34917351 11.78385792 12.99847290 8.10905021 11.72248536 11.59424244 11.33677321 10.81403324 4.59775760 11.69401284 10.19554630 -1.66886808 10.07874658 9.61983940 3.08639315 5.26171133 10.46828466 10.28880080 10.47276109 10.58895032 2.72329643 9.63703490 12.08492117 11.21361630 10.13065962 9.00251435 -0.00401620 0.60214000 0.62897000 0.01502800 0.02216400 0.02342600 0.00374650 -0.64584000 -0.00567570 -0.00567570 1.16810000 -0.00995650 1.05380000 -0.00387790 -0.00387790 -0.00387790 -0.00014315 1.95560000 -0.67039000 0.05808100 -0.63292000 -0.05563400 0.61317000 0.61317000 -0.06074800 -0.06074800 -0.06074800 1.13510000 -0.02972100 -0.54340000 -0.01174900 -0.61566000 0.54470000 -0.03459200 -0.61499000 0.01698500 -0.35658000 -0.64584000 -0.66744000 0.01950300 0.00319100 -0.66735000 -0.63082000 -0.62779000 -0.01752900 -0.01752900 1.05380000 -0.01285100 -0.66531000 -0.00387790 -0.64881000 -0.67183000 -0.00014315 0.55089000 0.55089000 -0.65165000 -0.65947000 -0.65947000 -0.02151000 -0.71024000 -0.05563400 0.61317000 1.49750000 -0.63935000 -0.06074800 0.00555290 -0.01574100 -0.05023500 -0.05023500 0.000 0.000 -0.649 -0.649 1.926 1.926 0.000 0.000 0.000 0.000 0.000 0.000 0.613 0.000 0.497 0.000 0.000 0.000 0.577 0.000 1.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.646 0.000 0.000 0.000 0.639 -0.610 0.000 0.236 0.236 0.000 0.000 -0.649 -0.649 1.926 1.926 0.000 0.000 0.000 0.000 0.000 0.000 0.613 0.000 0.497 0.000 0.000 0.000 0.577 0.000 1.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.646 0.000 0.000 0.000 0.639 -0.610 0.000 0.236 0.236 8.51708747 NA 6.85844979 10.53646103 12.46523911 7.10585928 10.00913313 8.26030564 8.72114226 0.91594151 11.74314609 11.71557489 3.37537312 3.46025765 2.97482296 8.49588020 2.91594151 8.84667320 11.70845493 11.44243499 9.61348248 4.13833120 8.13025496 10.40912401 6.70601245 3.37537312 1.79039672 NA 10.12701285 7.53554445 5.99630965 8.37536748 4.39706363 9.46090021 10.22199740 3.13832300 7.96396823 NA 7.38082207 12.31146988 8.74882582 6.56459309 NA 7.89702739 8.95210929 -1.66886808 3.57890249 -1.66886808 5.21361557 5.68984426 0.91594151 10.92109240 -0.08405849 7.88364220 10.35818810 10.66272996 5.92342970 9.63018120 12.71028390 8.51460873 2.57889042 2.41843285 12.56496733 1.13835577 -1.66886808 0.91594151 -0.66909746 13.064465 6.231839 9.270553 12.819002 10.369206 10.739568 13.016050 11.642580 9.128635 10.578011 12.872009 11.692506 8.998972 8.600100 3.085867 7.714678 11.359915 10.67249208 10.86064783 7.44471510 12.08052636 8.99453136 5.64385619 9.56638917 9.92389732 9.77544469 5.44991458 7.83479906 10.30035977 5.95302539 -1.66886808 10.16465393 5.75723931 7.66970996 10.06186785 10.11928380 10.36301893 9.21361630 7.40778866 11.08063322 5.66188923 14.60090601 10.17959614 10.89797860 10.11151299 10.88244115 8.67304790 10.59071653 10.62760273 8.63246926 NA 8.32726295 7.47754215 10.08502557 5.49084606 11.49682238 6.19515859 10.81378119 9.71197527 7.03833192 13.48147341 10.51398828 9.75828602 12.46588080 9.13187316 4.23786195 -0.08405849 10.15354405 9.63075365 9.76976513 TCGA-A2-A25F 66 0 NA 322 breast stage iia t2 n0 (i-) m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 3 6 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 0 0 0 66.6666666666667 33.3333333333333 10.8990593 10.1253100 11.4813603 10.6050707 8.4351456 9.9254714 7.8307307 10.9066274 9.8204946 11.4388979 11.0251089 10.7417499 0.6277936 9.9919254 3.7707445 10.0339958 4.5506237 9.2492322 10.3940437 4.2522794 NA 8.5114522 6.9616916 9.1933753 9.2127534 6.3602414 NA 12.2070879 10.3588269 4.1721114 8.5761582 8.3305405 0.3647965 6.1249774 10.0428283 11.0145515 9.8461523 10.7317342 10.0872224 11.4182750 1.7432564 7.1721114 14.9559865 8.4067548 9.4935241 11.4822696 11.2650194 4.3282333 NA 9.9897345 11.5106885 -1.9573557 11.1830190 7.6667097 9.3113703 6.7639281 10.7282341 11.8078035 10.2740495 11.8891022 13.0072143 6.4479692 11.0035543 10.6047916 11.6028028 11.4679131 5.2292880 12.3336391 8.3568450 1.8501993 10.4561918 10.1881236 2.0634339 8.0114951 10.3854585 10.4919769 10.4386302 11.0389487 6.0028308 5.7775381 12.8157098 12.3293139 9.8299146 8.9831418 0.12329000 0.00006596 0.00110930 0.01363200 -0.03531200 -0.03003300 -0.00393990 0.00569190 0.07426500 0.07426500 0.07426500 -0.02862800 -0.02862800 -0.02151000 0.00930980 0.00930980 0.00277450 0.00277450 -0.06128600 -0.03245000 -0.03558500 -0.02616700 -0.02616700 -0.02616700 0.04883000 0.04883000 0.04883000 -0.01969200 0.02910300 0.02910300 0.00055459 0.00110930 -0.03531200 -0.03668100 -0.03003300 -0.03003300 -0.00393990 -0.00393990 0.00624810 -0.02438800 0.04301500 0.07426500 -0.01656700 -0.01656700 -0.01656700 -0.01656700 -0.02862800 -0.02862800 -0.02151000 -0.02151000 0.00930980 0.00930980 0.00277450 0.00277450 0.00277450 -0.06128600 -0.03245000 -0.03245000 -0.03558500 -0.03762600 -0.02616700 -0.02616700 -0.04563500 0.04883000 0.04883000 0.00000000 -0.00013862 -0.03531200 -0.03531200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.3408907 5.7223075 6.3420355 9.2357376 10.8681846 6.0772964 9.7288911 10.8302248 8.5195443 4.9254725 12.6178356 11.6956218 2.9008185 1.5022797 3.1721034 8.6621314 6.4732804 12.1100946 11.2683370 11.1984371 8.7424007 1.5022797 8.9039153 9.9970246 9.6524687 9.2270838 0.6277936 NA 11.4769352 5.8883195 7.6758237 8.3374489 5.0981121 9.2101085 10.9017806 7.5124703 8.8290980 -1.9573557 8.4888777 12.6505054 7.1900330 7.5043074 -1.9573557 3.3647545 8.0967542 -0.3722064 4.2326531 NA 9.9915605 3.8787548 5.7010389 10.5396821 0.6277936 11.1701778 10.4609444 10.0800320 8.0400080 11.5699387 14.8483455 11.2147869 8.2752492 6.6315423 10.2171299 -0.3722064 2.2127561 NA 5.6126828 10.7596477 9.2534996 8.4722351 9.9919254 10.3771016 10.4251821 4.2522794 10.0662361 9.3804502 11.3620770 14.0522633 11.0463462 9.9897345 8.2692403 0.3647965 7.8820322 11.3808682 10.875125 11.102680 4.328233 13.446339 9.453804 9.643206 7.814318 9.093228 9.759961 9.496613 8.261997 11.025109 8.511452 2.949722 11.500594 5.300215 8.555322 12.404429 11.940957 10.301394 8.157494 7.875718 11.367993 10.384069 11.688057 9.846152 10.720768 9.024396 11.139214 10.781554 11.490686 10.750187 9.882032 NA 9.581551 9.502997 11.510689 9.555569 11.183019 8.102173 10.826389 10.728234 8.450638 14.369346 10.366446 11.359817 12.929382 9.977993 8.342036 3.042837 10.759219 10.272548 9.526644 TCGA-A2-A3KC 55 0 NA 1102 breast stage iib t2 n1a m0 female 2011 NA yes infiltrating lobular carcinoma 2 black or african american not hispanic or latino NA NA 3 5 4 3 3 4 4 3 6 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.040392e-07 12.5 12.5 0 37.5 37.5 10.4779992 9.7670161 11.5457010 9.5194192 8.4353548 8.8746030 9.8070211 9.6021529 11.1053120 10.5819099 11.9154875 10.5549240 1.6760417 13.8546864 3.7915015 10.0496117 7.9386387 8.5201169 8.9207819 12.7706124 0.5060941 13.7061522 5.6146215 9.8030528 10.5862479 3.6760191 NA 11.8171863 8.9469656 2.5060941 8.8235093 7.1749816 1.3134781 5.5935599 9.9878960 10.3061875 9.9747206 11.1125017 10.1161986 11.3132502 10.6986975 11.0882385 15.2108918 8.6872735 9.5988537 11.6129866 11.1851367 5.7634833 4.9154874 8.9655280 11.5777265 NA 10.9591099 5.6760219 6.0606851 5.5935599 10.5839136 11.8578640 10.4544638 12.4201079 12.7046183 9.8822219 10.8209630 10.7791083 11.4011037 11.0776122 5.2340184 11.4513574 11.6229278 NA 10.3527622 8.6959211 3.7881637 5.9323612 11.1540046 10.2927746 10.1705438 9.5915689 3.8636511 10.0529910 14.2304238 12.3503119 10.2008897 9.9297377 0.84613000 0.41346000 0.00180300 -0.00193990 0.00750000 0.00000000 -0.00105590 -0.00105590 0.00291330 0.00291330 0.00291330 0.00124810 0.00124810 0.01321300 3.65690000 2.76010000 0.00083195 0.00083195 0.00291330 0.00444110 0.00069327 -0.00691950 -0.00691950 -0.00691950 -0.00512270 -0.00512270 -0.00512270 0.43176000 -0.46238000 -0.46238000 -0.00055444 -0.01904000 0.00444110 0.00750000 0.00000000 0.00000000 -0.00105590 -0.00105590 0.00000000 -0.00193990 -0.00304750 0.00291330 -0.00332430 -0.00332430 -0.00332430 -0.00332430 0.00124810 0.00124810 0.01321300 -0.02890100 -0.45779000 -0.45779000 0.00083195 0.00083195 0.00180300 0.00291330 0.00444110 0.00444110 0.00069327 -0.46515000 -0.00691950 -0.00691950 0.00666530 -0.00512270 -0.00512270 0.43176000 -0.00332430 0.00291330 0.00291330 0.000 0.000 0.000 -0.458 0.000 0.000 0.000 0.000 0.000 0.000 -0.453 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.846 0.432 0.432 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.458 0.000 0.000 0.000 0.000 0.000 0.000 -0.453 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.846 0.432 0.432 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.14634159 6.81897962 6.44273454 11.10763517 11.14158791 7.43440722 11.11988597 9.70954240 8.60445760 1.96554420 12.26588071 11.77303236 4.36407511 2.75403232 5.38874060 8.21172869 4.20653383 10.16475435 10.93889936 11.00120205 8.84594662 3.46029698 7.96757615 10.22462940 7.22034156 6.56679233 0.09112433 NA 10.95885253 7.19259661 7.09481139 9.08163576 7.16430761 11.10474924 10.72738155 4.91548744 9.17143253 NA 8.77639191 12.73604189 9.21948293 8.61853600 NA 5.99794947 8.71311084 0.82806284 5.41298809 8.57353093 4.43683478 4.86364612 4.02965607 10.32107947 2.67601911 9.36252205 10.26181873 9.80129141 5.23401840 10.19172142 11.84162646 8.61723235 2.67601911 3.63538293 13.09017822 2.67601911 -1.49370273 1.96554420 0.82806284 14.436530 5.715550 8.250930 13.854686 10.279236 10.275934 12.770612 11.647246 10.903343 10.641164 13.142438 12.010171 8.965528 8.417488 2.506094 7.157148 11.991800 11.4489775 12.0776122 7.6405226 13.7809089 8.1372735 7.0452551 8.5463863 8.8724188 10.6869537 7.3887397 7.1281480 11.9154875 6.9531802 5.9490399 10.7552100 7.2134552 7.0688728 11.2327404 10.6087284 10.6968472 7.9798024 8.8930366 12.0744090 5.9069772 12.3628061 9.9747206 10.2030641 10.2726255 11.7574310 10.8206797 9.8575879 10.8158571 8.5131239 0.8280628 9.2365498 7.3222806 11.5777265 6.5829127 10.9591099 6.6959215 11.0939819 10.5839136 7.1827946 13.4425951 9.2800599 9.7845460 12.6486025 10.9823364 1.3134781 2.3134490 9.9752295 10.0452554 9.8252042 TCGA-A2-A3KD 47 0 NA 1206 breast stage iiia t3 n1mi m0 female 2010 NA yes mucinous carcinoma 1 white not hispanic or latino NA NA 3 5 5 2 3 3 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-07 1.387189e-07 22.2222222222222 33.3333333333333 0 22.2222222222222 22.2222222222222 10.6071104 9.9215051 11.9848202 10.2218371 8.4736051 8.6013403 10.5497698 9.1626149 10.1961804 13.7423748 11.3974814 10.4174786 -0.7538960 13.1262900 3.9184149 10.8146578 7.1767267 8.4456613 11.9294223 13.3850607 4.7378436 13.5835064 9.4566604 9.0317847 10.8398470 9.9368601 -1.7538960 9.2752762 9.9958584 3.9184149 9.0597703 9.0930464 0.5679348 4.6035433 9.8808001 10.6353516 9.5537591 11.0647709 10.1377727 11.7311894 17.6839829 11.9039774 15.0033791 8.0124681 10.5127668 11.8159633 11.6916506 4.4939163 4.2232681 9.1811540 11.1109490 NA 11.8457857 5.0404059 5.3440224 4.2459900 10.2537172 11.4325676 10.3916029 12.6667388 12.7721215 8.7478261 10.8447395 10.6113875 11.2893582 11.6007894 5.3957346 11.6576325 11.7713875 -1.7538960 9.9971147 8.7567531 3.2006456 5.3012730 9.9010725 10.8144202 10.2927721 9.9950205 2.0533547 8.8110911 13.8605264 12.3522248 10.0129320 9.3681699 0.88111000 0.88111000 0.00239150 0.00239150 0.00906480 0.00649930 0.00000000 -0.48741000 0.00725520 0.00725520 0.45687000 -0.00072905 -0.00072905 0.44600000 0.44600000 0.44600000 -0.00633350 -0.00633350 0.00600340 0.46148000 -0.00301420 -0.01557100 -0.01557100 -0.01557100 -0.00881940 -0.00881940 -0.00881940 -0.00647170 -0.00412130 -0.00412130 -0.00052107 0.00239150 0.00906480 0.00369410 -0.00251490 -0.00251490 0.01017900 -0.48741000 -0.48845000 -0.00384450 0.00086534 0.00725520 0.00308560 0.00308560 0.00308560 0.00308560 -0.00072905 0.01827700 0.44600000 0.44600000 -0.48005000 -0.48005000 -0.00633350 -0.00633350 -0.00633350 -0.00287580 0.44044000 0.46114000 -0.00301420 -0.49577000 -0.50295000 -0.01557100 0.00572540 -0.04966200 -0.00881940 0.00031066 0.49566000 -0.02062500 -0.01323100 0.000 0.000 0.446 -0.034 0.000 0.000 0.000 0.461 0.000 0.000 -0.493 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.881 0.000 0.000 0.496 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.474 -0.474 0.000 0.000 0.457 0.457 0.000 0.000 0.000 0.000 0.000 0.000 0.446 -0.034 0.000 0.000 0.000 0.461 0.000 0.000 -0.493 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.881 0.000 0.000 0.496 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.474 -0.474 0.000 0.000 0.457 0.457 0.000 0.000 0.000 0.000 8.3649300 NA 5.4358153 11.0834199 11.4710458 6.3674182 11.8579360 9.2551318 8.3641128 5.2117715 11.4025462 11.9301821 7.0820394 -0.1690957 4.2232681 8.6144956 2.6383056 9.7705308 12.1819828 11.1613083 8.9533482 2.3334524 7.6575000 10.1807856 6.6296932 3.8898434 2.1528648 NA 11.0879465 7.5244383 7.0042126 9.2325423 8.4045988 10.8415753 10.8979377 3.5679226 8.4505601 0.5679348 8.0725378 12.5480567 8.0008766 7.4939163 -0.7538960 2.8309449 8.3714025 5.8459015 4.1286316 NA 4.0273487 4.1057116 3.3752758 10.8574750 2.2459824 10.6396477 10.8377452 9.5092582 4.7217226 8.8053663 11.5941639 8.8780754 2.2459824 4.6383056 12.7731606 0.5679348 NA 3.4939163 2.7695602 14.0453699 5.5497708 8.4639469 13.1262900 10.4499488 10.9305186 13.3850607 12.3219695 8.5116040 10.9717813 13.2455928 11.2775180 9.1811540 8.7567531 0.8309854 6.9464291 12.2517890 11.1963627 12.7627971 7.0820394 14.4419566 8.9131006 5.9670879 9.0749188 8.3241400 10.2450730 6.7013162 9.1566317 11.3974814 5.9394758 3.8309550 11.5203672 8.7832075 6.1815657 12.2645370 10.5121899 11.7607031 9.4175599 9.1513761 12.5534034 6.2175332 11.4130324 9.5537591 10.4829002 10.9344580 10.8262476 10.6891917 10.2056288 10.6503323 8.7597168 NA 8.9914028 8.0168512 11.1109490 6.8384463 11.8457857 7.6680539 10.7171562 10.2537172 7.7851477 13.5473066 9.6210286 9.5383108 13.1906554 10.3623330 1.5679348 -0.1690957 10.6654226 11.2667954 9.5813795 TCGA-A2-A3XS 62 1 1032 NA breast stage iiia t1 n2a m0 female 2003 NA no infiltrating ductal carcinoma 9 black or african american not hispanic or latino NA NA 4 4 NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5.895554e-07 1.387189e-07 52.3809523809524 0 9.52380952380952 19.047619047619 19.047619047619 9.5319958 8.1907457 11.2990351 8.5529553 8.6784864 8.5081275 9.4175312 10.3130646 12.1914546 12.6597242 11.1307539 10.1858743 3.7854041 12.6737098 1.9780492 10.4337162 5.1874986 8.5159119 9.1269468 6.5779590 NA 9.5939826 10.3311934 10.2388916 10.6718239 4.6025400 -1.6069133 8.8810950 11.1877030 2.9780492 8.8224908 5.8277123 0.9780492 4.4805495 9.2580440 9.8718537 9.1818025 9.6761724 9.7071008 11.0315199 3.0935264 12.0324248 15.0350934 8.0711910 10.4112808 10.6954374 10.0378416 5.2634476 0.7150147 8.6586992 9.6164825 0.7150147 9.5152650 5.3817679 6.1875005 4.8849349 8.3689320 11.7151530 10.3089634 10.9440713 11.9819158 8.2772544 11.0094032 10.6340662 10.0619691 10.1947924 4.5223697 11.2148580 10.0256249 NA 10.5988773 9.7042647 4.3657765 4.7681261 8.9657843 10.4140640 10.5129979 9.4950597 4.2757297 8.8939258 12.3032583 11.5393345 10.3778585 10.0288022 3.6569000 0.1140400 -0.2889500 0.3386900 -0.0092666 0.0130100 0.6907300 -0.1852100 -0.4553300 -0.4553300 1.8047000 1.2510000 -0.4760700 -0.2398500 -0.2398500 -0.2398500 0.2780500 -0.2614100 1.1139000 -0.2974500 0.4273800 -0.0047079 -0.0047079 -0.0047079 0.0068044 0.3530000 0.2817000 0.4493500 -0.5254200 0.2956500 -0.5736800 -0.2436300 -0.4942300 -0.5134200 -0.7681700 -0.7681700 -0.2617900 -0.1859800 0.0249690 -0.0276710 0.2100800 -0.4553300 0.3769300 0.4107800 -0.4449100 -0.4551100 -0.4760700 -0.6804000 -0.2537000 -0.2398500 0.2956500 -0.2807300 0.2780500 -0.2614100 -0.2593800 -0.0918160 -0.2974500 -0.2974500 -0.5182500 0.0000000 -0.0047079 -0.0047079 0.1716600 0.0068044 0.2817000 0.3739700 -0.0018531 -0.2073400 -0.2098000 1.251 0.180 -0.240 -0.240 0.017 -0.261 0.000 -0.297 -0.518 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.275 0.296 0.183 0.374 0.374 0.000 -0.207 0.182 -0.476 0.095 0.339 -0.489 0.000 -0.489 -0.768 0.490 -0.185 0.208 0.208 1.349 1.805 -0.068 -0.445 0.000 0.000 1.251 0.180 -0.240 -0.240 0.017 -0.261 0.000 -0.297 -0.518 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.275 0.296 0.183 0.374 0.374 0.000 -0.207 0.182 -0.476 0.095 0.339 -0.489 0.000 -0.489 -0.768 0.490 -0.185 0.208 0.208 1.349 1.805 -0.068 -0.445 0.000 0.000 7.91860508 1.85251827 6.46454575 11.00180091 11.64958762 6.66384697 11.19600427 8.85767066 8.87000246 2.20044158 11.54298990 11.61687011 6.61708539 NA 4.90087647 10.00825381 3.71501475 9.87740347 11.03536142 12.10829536 10.10389047 1.39308666 8.91566550 10.08395501 7.75063598 3.78540408 2.20044158 -1.60691334 10.26652819 3.88493975 6.16787171 7.64574921 8.37465133 11.61612190 10.01238696 2.56301166 10.23974971 1.39308666 7.08308250 12.09796034 9.57299309 8.41267484 NA 4.97804458 7.71951340 5.90087888 4.71501475 -0.02195084 5.59275601 2.85251827 4.22597667 11.69772057 9.02970879 9.31418125 10.88117523 9.74236536 5.61225223 9.95054773 11.42254387 8.11418324 3.25106765 4.93224074 10.27534502 1.20044158 9.31418125 1.71501475 7.22280649 8.888179 9.376078 8.117598 12.673710 10.519466 11.072564 6.577959 11.441911 8.816652 10.570192 14.290646 11.402913 8.658699 8.488481 3.678489 7.781101 10.478556 10.574858 11.929331 5.602537 14.385645 8.827712 7.955327 9.565511 8.522367 9.668074 7.761590 7.763771 11.130754 9.896910 3.147974 9.839651 10.948392 9.357945 12.019249 9.856608 10.291685 7.565512 9.820921 7.335598 6.432002 11.123166 9.181803 10.197618 10.187500 12.216451 11.680652 10.310456 10.016965 7.683103 4.347283 9.536550 7.007794 9.616482 7.519789 9.515265 5.358867 10.905588 8.368932 7.449451 14.351274 9.879416 10.180170 12.415799 11.650767 5.715012 9.002060 9.981799 8.910753 8.982735 TCGA-A2-A3XT 45 0 NA 2770 breast stage iib t2 n1a m0 female 2006 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.080784e-06 4.855162e-07 1.33333333333333 26.6666666666667 2.66666666666667 37.3333333333333 32 8.9679965 8.2976371 11.0128331 9.2167830 9.1349586 8.6426272 8.4370042 9.1125909 12.1293031 11.2906118 8.6512146 9.3644405 0.8395565 10.3944810 3.0094905 9.9327699 7.0555102 7.5284057 10.1311268 2.2546243 0.2545940 10.0867088 8.0211388 9.5170806 9.8752880 4.6639992 2.4245459 12.6832416 11.3420727 2.0619490 9.4906241 7.7683372 NA 4.0359669 8.7771915 8.6798260 8.3979933 9.3447222 9.7369136 10.4885291 -1.7451641 8.4469026 14.0579843 8.8947193 10.6184654 10.1801644 9.4610138 3.3420711 -0.7454060 8.6372338 10.2211153 0.8395565 9.9020683 5.7859925 6.7262849 5.8912345 8.4220282 11.9262615 9.8596264 11.1693687 12.0614616 9.4018148 10.0498379 9.6397442 10.9831682 11.3088750 4.4444352 11.7399361 10.4232820 1.4245459 10.7132728 9.9778442 4.0920467 5.1734713 11.4295356 9.3186791 11.5713157 10.2211153 0.8395565 5.1125917 12.7711718 11.6948302 8.8367520 9.3473671 1.038000 1.338100 0.000000 0.243330 0.124090 -0.474230 -0.082827 0.450100 1.008700 1.008700 1.236700 0.628140 -0.450350 0.185620 0.185620 0.185620 0.399180 0.093971 0.184010 -0.148570 0.324210 -0.452180 -0.452180 0.514370 0.128950 -0.446590 -0.472640 0.135750 -0.045360 0.074612 -0.651420 0.000000 -0.444110 -0.430020 -0.447880 -0.447880 -0.082827 0.450100 0.546900 0.106200 0.095508 -0.330700 1.166000 -0.079687 -0.079687 -0.455710 -0.450350 -0.450350 -0.396040 0.185620 0.185620 -0.764890 -1.067800 0.093971 0.093971 -0.504180 -0.148570 -0.748080 0.311200 -0.754230 -0.452180 -0.452180 0.107220 -0.370490 -0.446590 0.135750 0.118500 -0.455280 0.790310 0.120 -0.450 0.114 0.114 -0.227 0.000 -0.504 -0.149 0.324 -0.754 -0.754 -0.452 -0.452 -0.399 -0.399 -0.318 -0.447 0.000 1.338 0.136 0.136 0.000 -0.455 0.000 0.000 0.000 0.000 -0.430 -0.430 -0.448 -0.448 0.000 0.000 0.106 0.106 -0.331 0.000 0.000 0.000 -0.106 -0.106 0.120 -0.450 0.114 0.114 -0.227 0.000 -0.504 -0.149 0.324 -0.754 -0.754 -0.452 -0.452 -0.399 -0.399 -0.318 -0.447 0.000 1.338 0.136 0.136 0.000 -0.455 0.000 0.000 0.000 0.000 -0.430 -0.430 -0.448 -0.448 0.000 0.000 0.106 0.106 -0.331 0.000 0.000 0.000 -0.106 -0.106 9.8503336 NA 4.3631360 11.1414496 11.9668145 6.7485860 11.6118870 8.1297910 8.5525465 1.2545940 12.1071394 11.9778314 3.8091983 -1.7451641 3.5400149 8.7027261 3.5400149 10.2742006 11.3501718 10.6512147 8.8091987 NA 9.0053169 10.3467063 7.3017340 5.1372535 -0.7454060 -1.7451641 9.7643850 1.9550524 7.0969607 9.2762840 4.9825282 10.8203736 10.1539668 2.8395767 9.9327699 NA 7.3864670 12.7638282 9.2838972 7.7957066 0.8395565 1.4245459 8.7384257 6.8656343 3.5025343 -0.7454060 5.9270360 4.8693187 4.4245325 10.9574319 4.0874968 9.7712948 10.9842307 10.1330441 5.0227939 9.1040150 12.4464403 9.4512119 6.5446291 4.8244675 9.3683521 1.7140476 7.0457728 1.0619835 10.1783088 8.860201 7.296269 9.050649 10.394481 9.339418 12.680350 2.254624 10.740691 8.486539 10.279057 12.475970 12.590000 8.637234 9.152455 4.424532 8.044144 11.435296 10.171982 11.285622 5.638314 13.461966 8.756447 6.526074 7.772280 8.641550 9.535711 7.331426 5.793768 8.651215 11.194556 2.061949 9.523737 4.276980 9.788796 11.530589 11.121889 9.071593 8.675623 9.047400 8.559532 5.905661 10.688519 8.397993 10.635882 11.150564 11.991223 11.788548 10.554390 10.186825 8.708909 NA 9.777191 7.167499 10.221115 6.049025 9.902068 5.697554 11.270199 8.422028 8.635331 14.923079 10.991223 10.938043 11.842387 10.678251 4.009499 1.061984 9.833926 8.263039 8.537698 TCGA-A2-A3XU 35 1 912 NA breast stage iib t2 n1mi m0 female 2006 NA yes infiltrating ductal carcinoma 3 black or african american not hispanic or latino NA NA 2 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4.855162e-07 1.733986e-07 31.5789473684211 10.5263157894737 15.7894736842105 21.0526315789474 21.0526315789474 7.9632493 8.6044424 11.0136775 4.7537971 9.2064611 8.6349998 9.7702764 9.6907801 11.3460330 12.3163750 9.7643651 9.5281952 3.0586455 11.6546626 0.6663021 9.4920867 8.0216840 9.1711520 6.5489760 3.9882575 -0.3336979 12.0861615 3.0586455 10.3568461 11.0973081 3.6663362 NA 6.9095067 10.2620567 3.7107238 10.3422901 5.2361903 NA 5.5366964 8.1481323 9.2161177 9.1800606 8.2883849 7.8999526 9.3466926 NA 6.1898957 12.6217104 6.9416662 11.0033973 9.6810509 9.0554264 3.9882575 0.6663021 7.4245560 10.3878594 NA 11.4825167 1.8362473 1.4736830 4.9701128 6.0238852 12.2088812 12.4555609 10.2961449 11.5245083 8.9735338 10.1056444 9.8635496 9.1206324 8.8806522 0.2513252 10.6252481 7.1339385 NA 9.6747616 9.7865709 0.2513252 1.4736830 12.0463881 8.9701137 10.0645422 9.2006358 4.8160825 4.8757850 11.7678163 11.1445970 9.3281110 9.3119914 1.77170000 1.77170000 0.00857220 -0.01862800 -0.08173800 1.09790000 -0.02999400 -0.02999400 -0.87490000 3.65690000 2.48160000 0.01615000 0.07268400 0.03679400 0.03679400 0.03679400 0.00513590 0.00513590 -0.03231400 -0.88228000 -0.84163000 0.12824000 0.12824000 0.12824000 0.13243000 0.13243000 0.13243000 -0.81966000 -0.77838000 -0.90882000 -0.03626500 0.07829400 -0.01629200 -0.88789000 0.50047000 0.50047000 -0.02999400 -0.02999400 0.00110930 0.00000000 -0.01725400 -0.90046000 0.04698400 0.04698400 0.04698400 0.04698400 0.02918400 -0.84723000 0.03679400 0.03679400 -0.00019689 -0.00019689 0.00513590 0.00513590 0.00513590 -0.88209000 -0.88228000 -0.86326000 -0.82798000 -0.09287400 0.12824000 0.12824000 -0.27595000 0.13243000 0.13243000 -0.83833000 0.91521000 0.13032000 0.27159000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.882 -0.828 0.000 0.000 0.128 0.128 -0.276 -0.276 0.132 0.132 -0.862 0.910 -0.820 -0.820 0.915 -0.778 0.000 0.000 0.000 0.000 0.000 0.000 1.055 0.523 0.000 0.000 0.000 0.000 -0.855 2.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.882 -0.828 0.000 0.000 0.128 0.128 -0.276 -0.276 0.132 0.132 -0.862 0.910 -0.820 -0.820 0.915 -0.778 0.000 0.000 0.000 0.000 0.000 0.000 1.055 0.523 0.000 0.000 0.000 0.000 -0.855 2.412 0.000 0.000 0.000 0.000 8.3528335 NA 3.3667698 12.2551647 11.5730357 8.5094061 11.0868196 3.6672336 8.5249511 0.9882666 12.6789575 10.9954341 2.1257503 NA -1.3335161 8.5596344 1.9882666 9.0205825 10.9876974 10.1962515 10.3471320 0.2513252 8.1481323 10.4386476 4.7324212 10.6342797 1.4736830 3.5732291 10.1072022 -0.3336979 7.6407474 8.2736632 4.7107293 10.0303801 10.0988748 3.6205278 10.8610899 -1.3335161 5.3667733 12.6147915 7.9166313 10.1869516 NA 3.6205278 8.6887007 3.0586455 0.9882666 NA 0.9882666 2.9882666 2.5732291 12.8681506 2.9142583 9.7148199 11.0451697 10.3822949 5.2209219 7.6321170 10.1785796 6.0150604 0.6663021 2.6663249 10.3164872 2.5732291 5.1420662 -1.3335161 7.5023831 11.266824 9.013954 8.140039 11.654663 9.590403 12.795535 3.988257 7.084185 8.781181 9.725677 13.983675 14.148952 7.424556 9.191854 4.023885 7.870904 8.623435 10.2069454 11.3810078 2.1257503 12.6203447 7.2773581 6.2285763 9.4704641 8.5289701 8.9266880 5.0586499 6.0757230 9.7643651 11.4523984 8.2736632 8.6349998 4.2209181 9.0461120 9.5110388 10.3133417 8.7038800 7.7243249 11.4111668 1.6663476 4.7324212 10.2342891 9.1800606 9.9922005 10.8696810 10.7650231 11.6005767 9.1082398 10.3554574 7.0106288 NA 9.4296283 5.8262053 10.3878594 5.5611520 11.4825167 3.5732291 11.7629806 6.0238852 7.3667724 14.4631331 10.4489217 10.3236514 11.9914979 11.5677656 -0.3336979 -1.3335161 8.8173495 7.7930375 9.0682790 TCGA-A2-A3XV 46 0 NA 996 breast stage iia t2 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 2 7 1 2 6 2 2 1 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.075072e-06 2.080784e-07 20.5128205128205 10.2564102564103 7.69230769230769 41.025641025641 20.5128205128205 8.0727881 8.1534568 9.7614798 4.4266271 10.2257128 8.2360400 8.9261525 9.0055642 10.1114443 13.3566531 9.0067710 9.8086010 1.5901469 15.2270401 9.2564750 10.3516755 8.9861174 7.5140883 2.8702266 11.9517547 NA 10.0894007 NA 10.3926544 10.5731178 10.4202999 4.6156576 8.5376568 10.8751961 -1.2172560 7.0542320 5.7369647 NA 7.3141509 8.8448153 8.9030072 8.0163888 8.5140883 7.6745532 9.0876909 7.4374050 8.1772321 13.2517115 2.7295093 9.4727672 8.6546747 9.0460386 3.7827650 3.7369620 6.6282589 10.5538460 0.3677065 10.0079767 3.3063352 3.7827650 4.2746195 8.6577507 11.4536468 10.5347317 11.1281745 11.4423193 6.5509530 10.0831219 9.4944362 9.1534568 8.9133397 NA 12.0513113 8.3900997 NA 9.6148681 7.7252838 1.5901469 1.1046721 10.0652785 8.7340542 10.4338210 8.2215610 1.7827860 8.9750621 11.9779877 12.0983434 8.6851444 8.7742913 -1.8014e-03 2.4689e-02 9.2770e-04 1.6286e-02 1.4190e-02 1.0982e-02 6.4564e-01 -6.6799e-01 -1.4463e-03 -1.4463e-03 -1.3127e-02 -8.7146e-03 -8.7146e-03 -5.5375e-03 -2.0824e-02 -2.0824e-02 -1.5243e-03 5.4237e-03 9.3098e-03 -3.3243e-03 -2.1784e-02 -6.9622e-01 1.5920e+00 5.8901e-01 -7.1338e-02 -7.1338e-02 -7.1338e-02 -4.9264e-02 -5.3743e-02 -1.8014e-03 8.4743e-03 2.9133e-03 1.4190e-02 1.4190e-02 1.0982e-02 1.0982e-02 6.4564e-01 9.8706e-02 -6.9224e-01 4.4729e-05 4.0243e-03 -1.0159e-02 -6.6669e-01 -6.5715e-01 6.3134e-01 6.0573e-01 -8.7146e-03 -8.7146e-03 -5.5375e-03 -2.0824e-02 -1.8014e-03 -1.8014e-03 -1.5243e-03 5.4237e-03 5.4237e-03 7.1803e-03 -3.3243e-03 -2.8664e-02 -2.1784e-02 -3.2314e-02 -6.9622e-01 5.8901e-01 0.0000e+00 -7.1338e-02 -7.1338e-02 -2.6441e-02 -1.3953e-02 -5.9135e-02 -5.9135e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.696 -0.134 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.625 -0.640 0.000 0.000 0.000 0.000 -0.657 -0.051 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.696 -0.134 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.625 -0.640 0.000 0.000 0.000 0.000 -0.657 -0.051 0.000 0.000 8.781360 5.736965 5.771455 10.793647 12.983438 9.350621 10.894231 NA 10.140778 2.483210 11.878826 11.362908 3.483210 2.242206 1.590147 5.440982 6.455194 9.815504 11.189506 7.596551 9.565768 4.827164 8.095652 10.660053 7.030697 15.247155 -0.217256 NA 10.354522 -1.217256 4.782770 8.755749 8.717934 10.115119 8.221561 0.782744 9.807909 -0.217256 6.754313 13.301976 8.250375 10.123732 NA 5.497015 7.883431 2.782765 6.455194 8.637638 3.030689 6.906891 0.782744 12.040599 -1.217256 8.928701 12.162418 9.720879 3.992225 9.542658 10.606137 8.358308 2.104706 3.030689 10.355469 4.912051 NA NA 2.689657 11.593140 7.537657 9.639973 15.227040 10.555496 11.926471 11.951755 8.244249 8.231918 9.140321 12.077103 10.533476 6.628259 8.423014 NA 8.373356 7.924877 10.070482 12.149228 3.992225 13.070550 8.569039 5.725283 7.140322 8.824428 9.588956 5.306332 8.586900 9.006771 10.233980 0.782744 8.703122 5.880801 7.908390 6.896512 10.758617 10.448993 8.002301 12.228043 1.782786 4.615658 9.926420 8.016389 10.161606 10.684390 7.458726 9.261539 8.278624 10.429778 5.859584 NA 10.018484 6.621973 10.553846 2.104706 10.007977 5.870232 10.786639 8.657751 7.758990 15.382014 10.831256 10.545567 12.469160 10.474077 -1.217256 -0.217256 9.336399 9.410303 9.135916 TCGA-A2-A3XW 42 0 NA 1712 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma 3 black or african american not hispanic or latino NA NA 3 3 4 3 5 4 4 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-08 1.040392e-07 40 0 0 20 40 8.43991979 8.37210456 10.83867237 6.80706249 9.05978815 8.23460095 10.87913598 9.21494901 11.89237554 13.46690062 10.10505285 10.32505603 2.31063096 13.28740560 1.08827731 10.27848070 7.02684431 9.08165466 11.14307493 10.91981565 NA 13.22518223 8.60788065 10.68879240 10.78056938 4.80706120 0.08827731 10.40641071 9.06170277 3.50328512 8.77474490 7.42214552 0.82521576 3.50328512 8.96986825 8.61702403 8.96271356 9.92587247 7.94207401 9.80934370 -0.49675305 8.97495715 14.63473710 6.21484558 11.17504418 9.84646777 9.43771005 4.96271558 7.31706343 6.78405242 10.77562016 -1.49654949 10.03271263 4.63256487 4.56936957 3.50328512 8.24643327 11.25796080 10.57071641 10.38439599 11.38133291 8.99212629 10.12533378 9.87287938 9.43844714 10.79675364 3.67320588 10.01947453 9.01404614 2.31063096 11.03904337 8.27477136 4.21588047 5.04244298 10.89156842 8.36126305 10.21408849 7.72245031 6.80706249 10.64251359 13.33012839 12.90975278 9.89129933 10.48556258 0.00041593 -0.00318590 -0.00083160 -0.00083160 0.00346870 0.02468900 0.26279000 -0.11926000 0.00130050 0.00130050 0.00097064 -0.00484610 -0.00484610 -0.05632200 0.00305220 -0.11234000 0.11125000 0.11125000 -0.12148000 -0.07013500 0.01279500 -0.10591000 -0.00470790 -0.00470790 0.00471900 0.00471900 0.00471900 0.09463700 0.00041593 0.00041593 -0.00055002 -0.00083160 0.00346870 0.00346870 0.00265640 0.01014600 -0.10618000 -0.11926000 -0.11926000 0.11561000 0.02202400 0.03651200 -0.00283100 -0.00283100 -0.00283100 -0.00283100 -0.00484610 -0.00484610 -0.05632200 0.00305220 -0.11234000 -0.11234000 0.11125000 0.11125000 0.11125000 -0.11900000 -0.10605000 -0.12460000 0.01279500 0.00263570 -0.10591000 -0.00470790 -0.00235530 0.00471900 0.00471900 -0.00816240 0.12108000 -0.00277070 -0.00277070 0.000 0.000 0.000 0.000 0.111 0.111 -0.121 0.000 0.000 0.000 0.000 -0.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.119 -0.119 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.111 0.111 -0.121 0.000 0.000 0.000 0.000 -0.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.119 -0.119 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.76302509 -1.49654949 5.69310776 11.76066985 12.26129697 9.30130001 12.53222405 7.77963926 10.11061237 5.71273608 11.16928404 12.28224310 5.86083371 1.50329785 3.14714386 6.62740402 4.59074572 11.47913000 11.98823076 9.50820460 9.16149346 6.13263853 7.59867933 11.17857753 6.99913751 8.89345110 8.24811591 NA 9.92744836 5.88698660 7.38592537 7.88482500 6.05017734 11.92394496 9.54972403 2.82521576 10.57474441 5.13263853 7.40414868 13.33839486 7.87396942 11.72486915 -1.49654949 4.05787479 7.66062918 5.65302848 5.81616448 NA 3.31063096 4.65303135 4.89559830 11.36281680 2.08824338 8.51590637 10.10133452 9.75772018 6.07313685 9.49480379 12.31666241 9.64538914 0.08827731 4.23120198 10.84396665 3.89560315 -1.49654949 6.85201008 5.33617268 13.307030 5.323460 7.520091 13.287406 10.014541 10.285871 10.919816 10.922452 8.902325 10.017996 12.267221 13.444742 6.784052 7.739296 1.088277 6.865226 9.671954 10.89291335 11.80220376 3.92954485 14.15948172 8.54357167 10.03515072 9.55517061 6.96680650 10.11382706 8.13445918 9.44945717 10.10505285 7.77006852 3.67320588 8.78521214 7.85422136 7.99343095 10.08306933 10.49904920 9.55449101 8.15970688 11.27456510 6.98709799 7.54220077 11.76282670 8.96271356 11.98760144 10.39809979 9.38974081 11.70525274 9.01008551 10.53118805 6.60131470 0.08827731 9.75881816 7.11799211 10.77562016 3.99513172 10.03271263 3.31063096 12.13035984 8.24643327 6.99913751 14.17249927 10.53842477 9.88590605 12.40414882 11.18737311 3.54767192 NA 8.88374299 7.93373432 9.01700964 TCGA-A2-A3XX 49 1 1439 NA breast stage iia t2 n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 5 3 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 8.323135e-07 1.040392e-07 18.5185185185185 18.5185185185185 3.7037037037037 37.037037037037 22.2222222222222 9.079939 8.354501 11.576353 7.960955 8.900159 7.926819 10.316618 10.551529 12.591814 14.334200 10.561707 10.650824 6.812696 12.855556 2.455150 9.108885 6.654816 8.974780 9.983109 5.803873 NA 6.821465 9.303767 10.213442 10.355633 5.740547 -1.544982 9.276918 11.037050 2.978708 10.064322 6.141643 -1.544982 5.821465 9.055986 9.364287 9.379214 9.044795 9.179658 10.850678 4.409343 7.801657 15.929499 6.761615 10.735914 10.701291 10.156883 3.703067 7.688764 8.080853 9.586358 NA 9.926311 5.615016 6.183064 4.542605 9.235684 11.929357 9.862412 10.013086 12.268223 9.803872 10.979685 10.747750 10.313513 10.856557 4.432425 10.887686 12.093919 2.262493 10.512459 10.570838 4.703450 5.374007 12.029382 9.379956 10.466021 9.846387 3.914574 8.950999 12.890423 12.053894 10.405700 9.886641 1.5118000 1.4902000 -0.2786700 -0.2480200 -0.0012473 0.6053900 0.5147200 0.2500700 -0.3807800 2.3814000 2.2828000 0.1502400 0.0813220 -0.2834600 -0.2834600 -0.2526100 -0.2630000 -0.2755500 -0.2761800 -0.2896400 -0.2806100 0.1051200 0.1064300 0.1064300 -0.2705700 0.4503700 -0.7012700 0.4864700 0.0000000 0.0043013 0.0875340 -0.2786700 -0.0284460 -0.0294090 -0.3062700 -0.3062700 0.5143800 0.2500700 0.2500700 -0.0089906 0.1165300 -0.0120240 -0.2963800 -0.2963800 -0.2963800 -0.2963800 0.0813220 0.0813220 -0.2834600 -0.2834600 -0.2538000 -0.2538000 -0.2630000 -0.2755500 -0.3032200 -0.2572100 -0.2896400 -0.2896400 -0.2806100 0.4321100 0.1051200 0.1064300 0.4116100 -0.2705700 -0.0899640 0.0705300 0.5192600 0.0252500 -0.0102050 0.000 0.000 -0.283 -0.283 -0.276 -0.276 -0.257 -0.290 -0.281 0.432 0.432 0.105 0.105 0.412 0.412 -0.181 0.000 0.000 0.000 0.000 0.402 0.477 0.000 0.000 0.000 -0.279 -0.279 0.000 0.000 -0.306 -0.306 3.657 0.250 0.000 0.000 1.960 2.341 -0.296 -0.296 0.296 0.296 0.000 0.000 -0.283 -0.283 -0.276 -0.276 -0.257 -0.290 -0.281 0.432 0.432 0.105 0.105 0.412 0.412 -0.181 0.000 0.000 0.000 0.000 0.402 0.477 0.000 0.000 0.000 -0.279 -0.279 0.000 0.000 -0.306 -0.306 3.657 0.250 0.000 0.000 1.960 2.341 -0.296 -0.296 0.296 0.296 7.66215778 0.45512334 5.54260785 12.08233559 11.89003254 6.65844287 11.30141766 8.75392806 8.78809773 3.40933662 11.41424005 12.16661927 4.28803366 NA 3.74054984 9.49611836 3.70306747 10.12181154 10.61280650 11.40733894 9.10350131 NA 9.05133349 10.34160244 7.41514598 4.88141012 1.45512334 0.45512334 10.74112380 4.49953978 6.19661098 7.97281326 9.37624089 10.29493016 10.94899915 1.04012092 10.71606328 0.04012092 7.35902562 12.19966225 8.16938940 8.25280544 -0.54477143 2.97870817 8.96887123 2.26249329 5.08450228 -0.54477143 5.56366762 0.77703039 3.36203498 11.51093453 8.73707390 9.06154887 11.21003124 9.91149820 6.22332794 9.25685215 11.77199090 8.04010612 4.62506588 4.96293764 10.42740556 2.77707248 11.83722731 4.00973234 7.70780913 8.954501 8.134624 8.562361 12.855556 9.290405 11.857223 5.803873 10.656349 8.831269 9.729522 13.353273 12.820509 8.080853 8.535961 6.313124 7.868772 11.223535 10.6727985 12.0787966 5.2365041 13.4273140 8.4266874 5.4551431 9.2405963 9.1873112 9.9704000 7.3469276 6.6498999 10.5617067 6.7266065 0.4551233 9.3657864 9.7341739 10.2505462 11.9624429 9.3888344 10.2216727 8.1381381 9.1813620 6.4775122 7.2397789 10.3385201 9.3792139 9.9634337 10.3339610 12.1647661 12.4655844 9.8975690 10.4252496 7.8038722 NA 9.9077402 7.9885512 9.5863576 9.0363443 9.9263108 5.9145765 10.7598230 9.2356835 7.5870004 13.4351940 10.5165149 9.8840273 12.2759210 11.5943753 7.2397789 3.0989922 9.8677136 9.1898535 8.9698579 TCGA-A2-A3XY 49 1 1093 NA breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 black or african american not hispanic or latino NA NA 4 4 NA NA 5 5 4 7 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.005712e-06 3.81477e-07 37.5 22.5 2.5 20 17.5 9.1420606 9.0310023 11.6654471 8.6157227 8.3425832 8.8747171 10.3419981 10.4335521 12.1116583 12.7522357 10.8862016 10.3758366 2.3965431 12.0231759 2.0746424 11.1292305 4.2039059 8.5330330 11.9883571 5.9994386 -0.3404407 7.7346222 8.6708159 9.5326022 10.6555914 4.8295147 0.8819778 9.3571354 10.5709807 2.7184822 9.2344975 7.1434046 NA 4.2840773 9.5724780 9.7785297 8.7845717 9.1380214 9.1142306 10.6023476 1.8819778 6.6137850 15.5525742 8.6693985 10.2962073 10.5188647 9.8559860 4.0288255 -1.9252206 11.3327505 11.4228011 -1.9252206 9.8678231 5.9449919 7.1380209 5.5422333 9.8617126 11.4885185 10.1288914 11.5876135 12.4088995 7.6330468 11.4554931 10.5833940 10.7263507 11.1649040 4.8025448 12.2860582 11.3831074 3.7470543 11.1154296 10.3657968 4.6935985 5.5744709 9.3823962 9.6406802 10.6701168 9.3588720 5.8884072 9.7910170 13.6425526 12.4173954 9.9660302 10.3812575 0.6974600 -0.0434660 -0.0710710 3.6569000 -0.0835980 0.1661000 0.2392300 0.2392300 -0.4284400 -0.4284400 1.1571000 0.0728270 0.0728270 -0.0123000 -0.0123000 -0.0123000 -0.0395290 -0.0395290 -0.0316320 0.0130740 0.1035100 -0.1654800 -0.1654800 -0.1654800 0.0489720 3.6569000 0.0533790 1.6553000 0.0000000 0.0000000 0.0548030 -0.0710710 -0.0835980 -0.0241260 -0.2381500 -0.1908700 0.2392300 0.2392300 0.2392300 -0.0538810 -0.0538810 -0.4890000 -0.1706900 -0.1706900 -0.1706900 -0.1706900 0.0728270 0.1811700 -0.0123000 -0.0123000 -0.0123000 -0.0123000 -0.0395290 -0.2511400 -0.2511400 -0.0316320 0.0174040 0.0174040 0.1035100 0.0871000 -0.1654800 -0.1654800 0.2045700 0.0489720 0.0033299 0.0289030 0.3188300 -0.0128510 -0.5206100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.104 0.102 0.102 -0.165 -0.165 0.000 0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.222 0.000 0.000 0.000 -0.245 -0.245 0.000 0.000 -0.031 -0.191 0.239 0.239 0.000 0.000 0.729 1.157 -0.171 -0.171 0.203 0.088 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.104 0.102 0.102 -0.165 -0.165 0.000 0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.222 0.000 0.000 0.000 -0.245 -0.245 0.000 0.000 -0.031 -0.191 0.239 0.239 0.000 0.000 0.729 1.157 -0.171 -0.171 0.203 0.088 8.5071683 -1.9252206 7.6272953 11.4662726 11.8638541 6.3232187 11.4183671 9.8066282 9.3563593 4.0053641 12.0683607 11.0738423 3.7750611 1.9815239 5.2445522 8.7130620 4.4321777 11.0160406 11.5220969 10.6366301 8.9059336 1.2445218 8.0504739 10.3290644 8.1487679 8.5734753 NA -0.9254946 10.1726583 4.1190241 6.6558269 8.9897586 8.4850774 10.5521391 10.7083026 3.4669403 10.1145733 6.4712314 7.7905883 12.6668496 9.1149159 8.8211407 NA 2.7750716 7.9449908 3.7750611 5.0633088 0.3965979 6.5134181 4.6606377 4.5664803 10.9938620 6.9480705 9.1785697 10.9067251 9.6562976 6.3692466 10.1363350 13.4007396 8.8819812 4.1407132 5.0053641 10.2448642 3.0288167 7.1107996 3.2039059 8.4871961 12.126410 10.554659 8.633047 12.023176 9.843638 10.228811 5.999439 8.975493 9.049837 10.615933 13.490698 11.823867 11.332751 7.691175 1.981524 7.598188 11.556552 11.5091241 12.3334130 3.8025448 13.4564719 8.4189219 9.2663024 9.6035687 8.0576198 10.2128436 8.2064830 7.9603223 10.8862016 9.6045447 4.1831530 10.0956062 8.3897759 8.7607416 12.8193024 10.3875091 10.5227425 8.3692470 9.1594347 8.6263344 7.5340577 10.9940035 8.7845717 10.3166093 10.5154953 11.5645996 12.2879583 10.8543456 10.2398473 8.9897586 0.3965979 10.3735250 8.4011342 11.4228011 7.7974339 9.8678231 6.7148706 11.0108960 9.8617126 7.3461591 13.9236892 10.3666602 10.5260949 12.4759724 11.3945805 6.5050795 1.7750505 9.9220752 9.8775464 8.9263752 TCGA-A2-A3XZ 46 0 NA 1532 breast stage i t1c n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 3 3 5 1 2 4 1 7 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 3.121176e-07 21.0526315789474 34.2105263157895 5.26315789473684 26.3157894736842 13.1578947368421 9.2950514 8.9756929 10.9835712 8.5209443 9.5004993 9.7797996 9.2855234 10.7675890 10.2157513 13.4400982 10.5035847 10.6610905 1.4629423 17.6384161 1.6328731 9.0831724 7.0479146 8.0628654 6.4797609 12.6075311 -0.5370054 11.9007046 5.1068089 9.5893085 9.6736239 6.9305576 3.2178356 10.8616962 10.9645409 1.6328731 8.0886616 7.0479146 -1.5370054 4.2703047 9.6114291 9.6133344 8.9234083 9.8166507 9.6570937 10.8420600 9.5209441 8.6114291 14.4058793 8.4359036 10.3452096 9.9801297 10.1655581 5.1494545 5.8723437 7.7506648 10.5172176 NA 10.2966333 5.2178395 6.9386857 5.1494545 9.5609845 11.9145500 10.6322512 10.8630314 12.8850830 7.8996639 10.6187194 10.1441909 10.8116806 10.3739699 5.5609839 11.0263871 10.3017624 -1.5370054 10.2303093 8.7712914 3.7131569 5.6821210 10.3228755 9.9437426 11.4842795 8.8702201 3.3209323 9.7495103 12.8165818 11.5532303 9.7114731 10.3509347 0.49787000 0.49787000 -0.00249380 -0.00249380 0.00485790 0.50631000 -0.00166290 -0.00768830 -0.16688000 -0.16688000 -0.00166290 0.00750000 0.00750000 -0.05023500 -0.05023500 -0.05023500 0.00777830 -0.00041585 -0.00484610 -0.00290910 0.00000000 -0.16675000 3.65690000 3.65690000 -0.22810000 0.00471900 0.00471900 0.00221930 -0.24953000 -0.27129000 -0.26035000 -0.00249380 0.00485790 0.26388000 -0.01133500 -0.01133500 -0.00166290 -0.00544640 -0.00387790 0.25140000 0.25699000 -0.26901000 -0.00557490 -0.00557490 0.00000000 0.00000000 0.00750000 0.00750000 0.00277450 -0.05023500 -0.05023500 -0.05023500 -0.00418190 -0.00041585 -0.00041585 0.00069327 -0.00290910 0.00750000 0.00000000 0.01042400 -0.16675000 -0.01285100 -0.00168000 -0.22810000 0.00471900 0.00221930 -0.00802440 -0.13510000 -0.13510000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.337 0.504 0.000 0.000 -0.228 0.000 0.252 0.498 0.000 0.000 0.000 -0.135 0.236 0.236 0.000 0.000 -0.153 -0.153 0.506 0.000 0.000 0.000 0.251 0.251 -0.123 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.337 0.504 0.000 0.000 -0.228 0.000 0.252 0.498 0.000 0.000 0.000 -0.135 0.236 0.236 0.000 0.000 -0.153 -0.153 0.506 0.000 0.000 0.000 0.251 0.251 -0.123 0.000 0.000 0.000 0.000 0.000 8.85204598 8.15295051 5.78488084 11.43593227 12.70277473 7.16626755 12.15360529 8.83781807 9.33182142 4.57147659 11.59497017 11.40580781 4.63287890 4.32093229 3.36984334 7.53709413 4.19087556 10.66047632 11.48254319 10.99067384 9.10500412 6.12116464 8.71798104 10.68302846 9.05540961 5.25736898 3.71087805 NA 10.56853370 4.65277902 5.66262423 8.19935433 7.66996713 11.09646546 10.20441941 4.71087805 9.69537342 -1.53700539 7.61015744 12.27643307 8.85419611 7.63787828 -1.53700539 6.07028198 8.03849160 4.34559508 3.21783559 -1.53700539 7.39664331 3.92598993 5.72974037 11.08179678 -0.53700539 9.56164251 11.14506926 9.51619957 6.89340469 10.99189487 12.59850146 9.22699469 4.44023466 5.41715040 9.81057388 0.04795711 1.04788733 -1.53700539 4.44023466 11.835903 7.861696 8.704936 17.638416 10.198932 11.089118 12.607531 8.596095 9.159607 10.044153 13.693911 9.504612 7.750665 7.632877 3.922388 10.955056 11.030671 11.3450223 13.1033104 4.8028033 15.2100037 8.9786524 8.0460353 9.4395166 8.1754797 11.2230715 9.0394367 9.2686964 10.5035847 6.9141639 1.9223882 10.8858056 10.1229483 7.9612830 12.2543189 10.6237693 10.5377629 7.8227021 10.0817968 8.0977635 8.5344149 10.9286541 8.9234083 10.4626002 10.5678788 10.8227020 10.5192515 11.5310590 10.5844860 7.9079674 0.4629946 9.7374297 6.4229545 10.5172176 9.3840496 10.2966333 4.3209323 11.2321705 9.5609845 7.0886611 13.4784982 9.5870737 9.7792339 12.2261648 10.9751991 8.9578081 4.9562472 10.5773455 9.4207801 9.7191612 TCGA-A2-A3Y0 57 0 NA 1546 breast stage iib t2 n1a m0 female 2010 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 4 NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 1 0 0 0 0 0 4.161568e-06 1.24847e-06 9.55414012738854 17.8343949044586 3.82165605095541 44.5859872611465 24.203821656051 9.03898043 7.12124236 11.26945528 6.84040532 9.01628905 9.23724319 10.06397838 10.29192351 12.53119378 13.34287525 11.09657681 10.72255781 2.39333382 11.22046624 -0.02165791 9.17057732 6.61732346 8.26214466 7.82168216 6.02994754 -1.60647397 10.96127814 7.89515900 9.46814585 9.72199700 6.53287329 4.09376298 10.52999288 11.92567801 1.20069267 8.23094990 6.76836167 NA 4.62213970 8.89814092 10.15528881 9.03447078 9.54497293 8.62694173 10.21469748 1.20069267 9.67698930 14.34792736 7.84990233 10.40454586 9.64776025 9.36126875 2.30021160 -1.60647397 7.76400970 9.58067407 -0.60669364 7.74646864 4.03718013 8.49003736 5.83626501 7.52774832 12.05776938 10.46980368 11.08593759 12.11879485 6.32995954 10.80536260 9.97263795 11.04885281 10.43498125 2.20069267 11.63277142 8.31367486 1.39330636 10.03447064 9.44044605 4.54449157 4.20067697 9.59238098 10.10369800 10.52163871 8.38484374 1.71523446 10.25712120 12.16078238 12.64421263 9.19260376 10.33436972 0.256830 -0.113830 0.018943 0.015727 0.129710 -0.116390 0.404440 -0.058058 -0.407050 0.949360 1.232800 0.567560 0.083487 -0.391960 0.155620 -0.388280 0.480450 0.202890 0.620790 -0.383690 -0.250790 -0.239960 -0.239960 -0.239960 0.168950 0.218370 0.218370 0.073115 -0.165610 0.256830 0.190560 0.024408 -0.421780 0.095653 -0.412230 -0.628930 0.404440 -0.058058 -0.015054 -0.111920 0.531860 0.030732 -0.362380 -0.464190 0.311610 -0.267330 -0.871270 -0.090361 -0.391960 -0.375720 -0.321000 -0.321000 0.480450 -0.382590 -0.407890 -0.662440 -0.383690 -0.383690 -0.250790 0.047552 -0.239960 -0.239960 0.031859 -0.382800 0.218370 0.224220 -0.645460 -0.748120 -0.238020 0.000 0.000 -0.382 -0.382 -0.383 -0.383 0.000 -0.384 -0.251 0.000 0.000 -0.240 -0.240 0.000 0.000 0.218 0.218 0.257 0.257 0.000 0.000 -0.381 -0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.404 0.000 0.000 0.000 -0.379 0.885 0.000 0.000 0.000 -0.114 0.000 0.000 -0.382 -0.382 -0.383 -0.383 0.000 -0.384 -0.251 0.000 0.000 -0.240 -0.240 0.000 0.000 0.218 0.218 0.257 0.257 0.000 0.000 -0.381 -0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.404 0.000 0.000 0.000 -0.379 0.885 0.000 0.000 0.000 -0.114 8.8258638 NA 5.7683617 12.1331027 11.6276905 7.4368964 12.0829925 7.2514587 9.1041715 NA 11.8477499 12.2934426 3.2006770 NA 2.3933338 7.7084714 4.3706037 11.3630683 12.5750179 10.1318366 9.5398908 5.6787255 8.5594853 9.8670279 6.9782849 9.1590226 7.6003367 1.3933064 9.0885503 0.3933064 8.1581936 8.9782846 8.0515336 10.5406256 9.8916727 0.3933064 11.3830714 4.4594119 7.0080319 12.6841329 8.8871777 12.0526491 -1.6064740 5.2513025 7.8069498 5.3121859 3.7152454 NA 6.4431707 1.5632558 5.7856395 12.7251488 4.6787255 9.0989545 11.0937618 9.6155132 6.1812238 10.6951040 13.4139548 6.5682480 4.9011179 4.8195864 9.9579480 1.5632558 -1.6064740 6.1615068 6.0657468 10.412548 10.237636 8.262145 11.220466 10.553193 10.857868 6.029948 8.309202 8.229373 10.260601 12.478712 11.684493 7.764010 6.664786 4.065745 8.071042 10.520994 10.634411 11.411522 4.393320 14.048013 9.118688 8.637686 8.455368 8.467464 9.645721 7.657765 5.733173 11.096577 11.845306 NA 9.122093 7.985779 9.779632 10.610371 10.817226 9.235672 8.360548 11.080041 5.669446 6.789927 9.682920 9.034471 10.385552 10.227398 10.009871 10.124641 10.211904 10.226608 7.327013 NA 10.280569 6.029948 9.580674 7.429495 7.746469 4.733170 10.696001 7.527748 8.235672 14.654995 10.932238 10.398596 12.419673 11.745366 5.134788 -1.606474 10.395434 9.108426 8.684493 TCGA-A2-A4RW 49 0 NA 222 breast stage iiic t2 n3a m0 female 2011 NA NA infiltrating lobular carcinoma 27 white not hispanic or latino NA NA 4 5 4 3 1 4 2 9 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.318999e-06 5.867347e-07 8.25688073394496 47.7064220183486 2.75229357798165 24.7706422018349 16.5137614678899 10.0951671 9.2005988 10.8914159 9.1630070 7.6978509 9.0815303 10.4742314 9.3986144 11.0485132 9.0555056 10.9753588 10.2299826 0.8607642 13.3737361 3.6681078 10.5588747 5.5795664 8.1523031 7.7145780 12.3774338 1.2757818 14.1258266 5.4050700 9.2297645 10.6761321 8.9304225 1.2757818 9.4381776 10.1204920 4.5611856 9.9033202 6.7515200 NA 3.4457135 9.9968855 10.5052060 8.9322112 10.3875741 10.1916657 10.6681037 1.2757818 11.0398285 15.1770539 8.2199129 11.8962352 10.5858310 11.1271450 5.5795664 7.5611886 9.1306547 10.6729261 0.8607642 9.6200821 6.8380290 6.2065241 5.6851777 9.8226808 11.6554354 10.6519117 12.0260746 12.5705506 8.6333382 11.0290031 10.4421503 11.4717736 10.7741370 4.7993464 11.1515357 12.6029179 1.2757818 10.2630504 8.8110616 4.4867980 4.8607493 10.4723885 9.4985812 9.9313171 9.5738488 2.7352189 8.5308148 13.5020480 12.8748855 10.3921303 9.6978511 0.51542000 1.03000000 0.01070300 0.01530800 0.00889200 0.47753000 0.98991000 0.01028500 -0.52502000 0.00694350 0.49459000 0.54101000 0.01126100 0.01084200 0.01084200 0.52801000 -0.00292270 0.00597000 -0.51424000 -0.00761010 2.35870000 -0.00968060 -0.00968060 0.00597000 -0.01477800 -0.01477800 -0.01477800 0.00930980 -0.51774000 0.50950000 -0.00097017 -0.52317000 -0.51918000 -0.38123000 -0.53399000 -0.53399000 -0.53124000 0.01028500 -0.51177000 0.53977000 -0.50639000 -0.52502000 0.00000000 0.00000000 0.00000000 0.00000000 -0.98449000 -0.48313000 -0.52348000 0.01084200 -0.52164000 -0.52164000 -0.00292270 0.00861350 0.00861350 -0.52409000 -0.00761010 -0.01202400 -0.53526000 0.01586600 -0.52675000 0.00597000 0.01768400 -0.01477800 -0.01477800 0.00930980 0.00708260 0.00652620 -0.51053000 -0.507 -0.507 0.000 -0.522 0.000 0.000 -0.524 0.000 -0.529 0.000 0.000 -0.517 0.000 0.000 0.000 0.000 0.000 0.447 0.447 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 -0.420 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 0.000 0.000 0.000 -0.507 -0.507 0.000 -0.522 0.000 0.000 -0.524 0.000 -0.529 0.000 0.000 -0.517 0.000 0.000 0.000 0.000 0.000 0.447 0.447 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 -0.420 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 0.000 0.000 0.000 8.3869221 1.5976980 5.5611886 11.3140194 11.3820221 7.1192047 11.4047473 9.4383413 8.9909591 4.6681021 12.0187273 12.2984160 3.3632552 4.4050666 5.2757856 8.1736317 4.4852400 10.0903688 11.4121367 10.6920561 9.4985812 2.9762170 8.2701397 10.6360848 7.0037068 5.2530665 0.2758414 1.2757818 9.8052168 5.9622876 7.8032632 8.2415704 9.5272688 10.5747940 10.7004775 4.2757893 9.1290960 0.8607642 7.9657843 12.4060351 8.9605349 7.7433918 0.2758414 4.4852400 8.3256347 5.4050700 4.1337690 -0.7242777 5.3843123 5.2530665 4.5237125 10.2328883 -0.7242777 8.1736317 10.7596021 9.8178509 5.8456431 10.1283158 12.0687799 8.3605947 3.0831453 4.5977159 11.0875624 3.9196452 NA 0.8607642 2.2757818 11.906270 6.597714 8.438178 13.373736 9.807655 10.351934 12.377434 13.258334 9.714578 10.570407 12.850971 10.781598 9.130655 8.908781 1.275782 7.561189 10.661649 11.8404122 12.7797362 8.1856793 13.6884865 9.1228438 6.5046045 9.3605947 7.3472484 11.0668434 7.5472493 6.9124104 10.9753588 6.1212766 3.0831453 11.0819331 6.7676389 7.7087873 11.1337673 10.3665603 10.3499277 7.3632491 8.2729656 10.8437424 6.1584299 11.7761303 8.9322112 10.6952199 10.5669571 10.8120335 10.5977144 10.8677761 10.9579031 8.4356578 6.9268380 9.4029423 7.0082594 10.6729261 6.4754595 9.6200821 7.1946495 11.6142442 9.8226808 8.0991537 13.7854995 9.2673083 9.6278297 13.2117800 11.8612184 5.0037057 -0.7242777 10.9380096 10.2146308 10.1055090 TCGA-A2-A4RX 67 0 NA 742 breast stage iia t2 n0 m0 female 2012 NA NA metaplastic carcinoma 0 black or african american not hispanic or latino NA NA 3 4 6 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 2.080784e-07 33.3333333333333 26.6666666666667 6.66666666666667 13.3333333333333 20 10.7997743 10.6074934 11.4294245 9.5576996 7.8255510 9.0219483 10.9990338 10.6300406 11.9854223 12.7651955 10.0776907 10.2857111 0.3336527 12.4505291 3.0341453 10.2688629 5.9919095 8.4885158 8.1665879 6.6646151 NA 8.7849090 7.4935689 9.5355155 10.7065629 5.3109762 -0.6663473 11.1955602 10.7195603 0.3336527 8.7683259 9.4304130 0.3336527 5.6004839 9.7931295 9.8660538 9.0530866 10.3294651 10.0201984 9.2420906 3.5036286 6.9847500 16.8261222 8.6940841 9.7280748 10.9923557 11.0100958 5.2405891 NA 8.9612318 13.5700111 -0.6663473 10.7833624 8.7557625 6.9557499 4.7931312 8.8767297 11.7393712 10.0114175 12.1691562 12.8014308 7.1084847 11.2148118 10.9988206 10.8689732 11.7176721 5.4211593 11.2330548 10.5474096 NA 10.7000201 9.5036228 4.2916109 4.6556266 11.4812208 9.7065630 10.4815388 9.8796277 6.5816254 10.0743219 14.3605671 12.8232950 10.2285157 9.8902039 -0.0011846 0.0139110 0.0962340 0.0966700 -0.4617400 0.2878600 0.0984760 0.1240200 0.3646800 0.3646800 0.3406400 -0.4724700 -0.4724700 0.0462750 0.0462750 0.0462750 -0.4911200 -0.4692900 -0.2257600 0.2537100 -0.0008316 -0.2250200 -0.2126800 -0.2126800 0.0300290 0.0300290 0.0300290 0.2331800 -0.0533410 -0.0011846 -0.2419200 0.1007400 -0.4930300 -0.4617400 0.3312400 0.3312400 0.0984760 0.1240200 0.1064300 -0.4975700 -0.8031900 0.3429600 0.0560850 0.0560850 0.0530350 0.0303800 -0.4724700 -0.4801800 0.0462750 0.0462750 0.0462750 0.0380650 -0.4692900 -0.4692900 -0.4692900 -0.2257600 0.2537100 0.2537100 -0.0023553 0.0000000 -0.2250200 -0.2126800 0.0680910 0.0300290 0.0300290 0.2331800 0.0359470 0.0386300 0.0386300 -0.472 -0.472 0.000 0.000 -0.469 -0.469 -0.226 0.254 0.000 0.000 0.000 -0.225 -0.225 0.000 0.000 0.000 0.000 0.000 0.000 0.233 0.233 0.000 0.000 -0.208 -0.208 0.101 0.101 -0.462 -0.462 0.331 0.331 0.000 0.000 -0.474 -0.474 0.381 0.381 0.000 0.000 0.000 0.000 -0.472 -0.472 0.000 0.000 -0.469 -0.469 -0.226 0.254 0.000 0.000 0.000 -0.225 -0.225 0.000 0.000 0.000 0.000 0.000 0.000 0.233 0.233 0.000 0.000 -0.208 -0.208 0.101 0.101 -0.462 -0.462 0.331 0.331 0.000 0.000 -0.474 -0.474 0.381 0.381 0.000 0.000 0.000 0.000 7.5333702 NA 5.5235212 10.7087373 10.6573156 6.2888255 11.5123627 9.9576159 8.5903546 2.7931260 12.9798065 11.5597397 4.9775547 NA 5.2163423 8.6420369 2.1410403 10.0927538 11.3787749 10.5173333 8.7238667 1.3337100 8.4131828 9.8660538 8.1183327 5.8255516 6.1018812 3.2405891 11.7486473 5.3560663 9.4910448 8.7303027 4.5816224 10.7645267 10.5204312 3.5036286 9.9139564 NA 8.3109776 13.1046714 9.3066776 12.1228239 -0.6663473 3.0341453 7.7087370 2.3337100 4.9775547 NA 6.4105141 3.3336956 4.3780954 10.4284353 10.0350043 9.9120706 10.5869544 9.2405884 8.2495771 10.1386356 12.0831483 7.9883336 3.2405891 4.8882854 10.1705373 2.1410403 4.6556266 1.6556266 5.5235212 11.6571664 7.0061230 7.8215380 12.4505291 10.1220981 10.3273439 6.6646151 10.5595078 9.1281137 10.3449251 13.1185372 11.7073787 8.9612318 7.3052419 0.9186915 7.4158465 10.7714499 11.705475 12.303804 7.013177 14.424717 9.157065 9.284983 8.511117 8.845451 10.592735 7.628319 6.911127 10.077691 10.720099 3.034145 11.192844 7.673548 9.437209 13.188858 10.636337 10.422486 9.023696 9.273277 10.229273 7.518573 11.997694 9.053087 10.303084 9.989229 12.003469 12.197110 11.114648 11.003469 9.551656 8.506125 10.163032 10.154794 13.570011 8.367121 10.783362 9.379457 11.218250 8.876730 8.115058 13.938367 9.981156 10.821035 13.343789 11.448416 5.872856 2.333710 10.541322 10.251070 9.764150 TCGA-A2-A4RY 46 0 NA 648 breast stage iiic t3 n3a m0 female 2012 NA yes infiltrating lobular carcinoma 18 white not hispanic or latino NA NA 3 5 5 3 3 3 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 6.935946e-08 27.2727272727273 18.1818181818182 9.09090909090909 27.2727272727273 18.1818181818182 10.345606 9.364040 11.852465 8.993908 8.169392 9.103804 10.844378 9.850544 11.074803 12.423149 11.566985 10.535999 1.562084 13.320424 3.784452 10.578870 7.831968 8.921080 10.672763 11.660314 4.186556 12.475201 7.554528 9.623127 10.523994 6.243886 -1.022977 9.902654 8.332451 5.531687 8.698199 7.725293 2.147014 4.784457 10.042516 9.677539 9.153273 11.345879 9.862796 11.274302 11.071837 10.546006 15.202721 8.611711 10.401791 11.260188 10.972513 6.205918 4.907838 8.805236 12.475076 -0.022830 11.052913 5.334651 6.308017 3.977097 10.049902 11.984828 10.505065 13.268774 12.957864 8.191419 10.686614 10.796081 11.130335 11.570024 4.835080 11.760916 11.404150 -1.022977 10.579335 8.909314 5.650655 5.186552 10.765818 10.096689 10.599609 9.148276 3.977097 10.288848 14.415437 13.277953 10.319730 10.161975 0.0616510 0.1592000 0.0031910 0.0026673 0.0063871 0.0027745 -0.1097200 -0.1097200 0.7571900 0.7571900 -0.0128510 0.0030522 -0.0022189 0.0011093 0.0011093 0.0011093 -0.0019399 -0.0019399 0.0045800 -0.0552290 0.0015255 -0.0349040 -0.0349040 -0.0349040 0.0075000 0.0075000 0.0075000 -0.0045695 0.0616510 0.0616510 -0.0133840 0.0031910 0.0063871 0.0019820 0.0027745 0.0027745 -0.1097200 -0.1097200 -0.1097200 0.0019418 -0.0073339 -0.0305400 0.0000000 0.0000000 0.0000000 0.0000000 0.0049969 0.0049969 0.0011093 0.0011093 0.0011093 0.0011093 -0.0019399 -0.0019399 -0.0019399 0.0045800 -0.0552290 -0.0552290 0.0015255 -0.1094600 -0.0349040 -0.0349040 0.0079175 0.0075000 0.0075000 -0.0045695 -0.0011087 -0.1656100 -0.1656100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.166 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.166 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.8036481 3.8350853 5.6064570 11.7257118 11.4454691 7.6909331 11.5966318 9.9841619 9.0239780 3.8350853 11.7928831 11.0664044 4.0645639 3.3694106 5.8350802 8.6155355 3.7319869 10.1236683 11.2297650 10.5239940 8.8099896 6.2532235 8.4568801 10.6994802 7.7551767 8.3801117 0.5620836 0.5620836 11.0724966 7.6317358 7.5732897 7.8004670 9.4699541 11.5277166 10.2848697 4.8597410 9.2166981 0.5620836 8.8163034 12.9852656 9.7828435 7.8288486 -1.0229766 1.9770967 7.9855283 NA 4.5620592 1.2990101 5.9657843 5.3905576 4.7050213 10.3439682 2.9770967 10.1883795 10.6009811 9.5945670 5.6064570 9.7884743 11.4533395 8.5239939 2.4365350 4.2625008 10.6943476 0.9770967 NA 2.1470136 2.4365350 12.0486290 4.8597410 8.6245579 13.3204241 10.5055538 9.8366344 11.6603136 11.9421624 9.3488762 10.7007606 13.2378722 11.7886750 8.8052360 7.3694168 0.9770967 7.3737048 10.7976775 11.683164 12.112007 6.663601 13.416666 8.819450 7.825723 9.440624 7.126847 10.665053 7.691345 8.184114 11.566985 6.452833 5.677539 10.595485 7.862796 6.697310 12.087257 10.469954 10.018759 8.093443 9.367269 11.036782 6.765002 12.747119 9.153273 10.207720 10.129384 11.311652 11.199291 9.929841 10.737404 8.647756 -0.022830 9.845320 7.531689 12.475076 8.321396 11.052913 5.919614 11.710539 10.049902 7.225027 14.169662 9.461922 10.268270 12.873621 11.283161 6.907836 2.562059 10.229174 9.825723 10.225620 TCGA-A2-A4S0 77 0 NA 706 breast stage iia t2 n0 m0 female 2012 NA no mucinous carcinoma 0 white not hispanic or latino NA NA 3 5 2 2 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 1.387189e-07 12.5 12.5 0 12.5 62.5 10.72534061 9.60823227 11.78734304 9.80953069 8.08370589 8.78414536 11.72311593 9.80869169 9.19576417 13.26292574 11.91990170 10.53352091 2.06132691 11.89106054 4.23126343 6.79604740 7.36967673 7.98615036 10.74125773 13.74224671 0.06129234 15.10579598 0.06129234 9.97683631 10.71283803 8.20854262 NA 10.42656668 10.96747680 2.52077424 7.20599651 5.80280584 -0.93870766 4.06133555 9.47072882 9.95008109 11.43365877 9.12473291 9.89343669 11.20949662 14.26215981 11.58954774 14.67452297 8.35333741 10.83530119 11.61232504 11.28352897 3.45364927 NA 8.51666486 9.46434991 0.06129234 10.82039375 2.64630093 3.76177460 3.14880398 10.00970505 11.60267646 10.37308613 12.88699229 12.72889293 8.64442053 10.34268829 10.40402922 10.70022616 11.08405237 5.01553325 11.30183105 12.63805836 NA 10.17898086 8.41006587 3.76565143 4.45365585 9.94245175 10.19640578 10.91620619 9.22750091 1.06136147 4.70519277 11.46381697 11.27140029 10.33338437 8.82786665 -0.00041585 -0.00041585 -0.00368440 0.00277450 0.00027728 -0.00152430 0.00268300 0.00198620 -0.00201220 -0.00201220 -0.00201220 0.00000000 0.00000000 -0.00152430 -0.00152430 -0.00152430 0.00136270 0.00136270 0.00055459 0.00235810 0.00527490 -0.00307310 -0.00307310 -0.00307310 0.00124810 0.00124810 0.00124810 -0.00401620 -0.00041585 -0.00041585 0.00694350 -0.00368440 0.00027728 0.00027728 -0.00152430 -0.00152430 0.00889200 0.00268300 0.00198620 -0.00097017 -0.00097017 -0.00201220 -0.00041585 -0.00041585 -0.00041585 -0.00041585 0.00000000 0.00000000 -0.00152430 -0.00152430 0.00000000 0.00000000 0.00136270 -0.00674750 -0.00812320 0.00055459 0.00235810 0.00235810 -0.00192310 -0.00263220 0.00194180 -0.00307310 0.00097064 0.00124810 0.00124810 -0.00401620 0.00223480 -0.00290910 -0.00290910 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.39449313 NA 4.38326883 11.21298863 10.83982570 7.49283540 11.67443660 8.13470302 9.87441353 NA 11.48760256 12.04985032 5.99207501 0.64625484 4.23126343 8.06415263 3.52077424 9.51151805 11.53757772 10.16528125 9.15936984 NA 7.77214431 10.53097959 5.81622593 3.96822902 1.38327574 NA 9.98911573 5.06133987 4.34673710 8.44071638 4.52076795 11.78205020 10.03216271 4.94398226 8.25609450 NA 7.12742693 12.64336216 10.39505219 8.52076952 -0.93870766 0.64625484 8.32108116 NA 4.73376106 0.06129234 1.64630093 6.22231771 2.52077424 9.86061943 NA 6.93170197 10.50790423 9.11390596 4.01553325 9.50842113 11.47125906 6.95615542 2.23124807 2.52077424 11.00933996 3.06134419 NA 3.86869664 NA 13.8833205 3.1488040 8.8426976 11.8910605 10.2493084 9.9637130 13.7422467 13.4954448 8.8095305 10.4933576 12.3933744 11.6605533 8.5166649 6.0837048 -0.9387077 7.6387668 10.8459726 11.05569125 12.61772412 7.84597296 14.00700568 9.05427627 8.53301312 9.03431753 8.13547946 10.51154384 6.80280455 9.15805295 11.91990170 7.23626395 7.21108522 11.94627147 8.67972323 6.02816024 11.07291452 9.38776727 10.60291845 8.10299714 9.29375878 10.36739946 2.86868677 12.22595724 11.43365877 9.98169071 10.27261777 11.75830534 9.48655369 9.60823227 10.48917441 9.39895976 NA 9.65305643 7.55615348 9.46434991 0.06129234 10.82039375 3.91932101 11.38896624 10.00970505 7.07256461 13.59970866 10.12877219 9.96597240 13.02558843 9.98540807 0.64625484 NA 10.39895976 10.20472103 9.79095852 TCGA-A2-A4S1 66 0 NA 820 breast stage iia t2 n0 m0 female 2012 NA yes metaplastic carcinoma 0 white not hispanic or latino NA NA 1 4 5 3 5 2 2 9 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.872705e-06 2.080784e-07 16.6666666666667 25 10 31.6666666666667 16.6666666666667 8.6187199 8.7669711 10.7830828 6.9666427 10.2161195 9.4108272 6.2427035 11.0041809 11.6175485 3.0889048 9.0196363 10.3253917 NA 7.2747658 2.9368923 14.3607705 4.8544346 8.9957898 7.9764244 -0.2331081 NA 5.4674099 3.2264006 9.7299392 0.7669767 7.4674107 0.7669767 11.9211562 8.2427044 3.2264006 8.8003939 8.3594280 NA 4.0888963 9.3311205 9.1742386 8.6124609 8.2866072 9.1001264 10.1657146 NA 2.3519392 14.2412473 6.6766243 10.1168050 9.3387237 8.8330602 2.9368923 1.3519110 8.4604579 11.5063297 -0.2331081 9.4760548 6.4674099 7.2099144 4.8962525 10.4393962 11.4936149 10.6265058 10.7226208 12.2981087 10.2036825 9.9567955 9.7934944 10.8431185 10.1278181 3.2264006 11.7841273 8.2866072 2.0888879 11.1436390 8.3853564 4.4257547 6.4534715 10.3090355 9.4198159 10.3603621 8.9368958 5.4393971 10.0956458 13.3983754 13.0896033 9.3631608 10.3339763 -0.0384890 -0.0384890 -0.4446200 0.2149400 0.2002500 1.2977000 0.2348300 0.1768900 0.2591300 0.2591300 0.2555300 -0.3975700 -0.3967400 -0.0982000 -0.0779240 -0.0779240 -0.4329300 -0.4329300 -0.3396800 -0.1259400 -0.4417100 -0.3878300 -0.3878300 0.2497500 -0.1590300 -0.7606700 0.0053655 0.0176350 -0.0384890 -0.0384890 0.1799000 -0.4380300 0.2054400 0.2161600 0.2033000 0.2033000 0.2348300 0.1768900 -0.4983300 0.8464500 0.2080400 0.2591300 -0.4511800 -0.4511800 0.0838700 -0.0902750 -0.4043700 -0.3902200 -0.0982000 -0.0779240 -0.1112600 -0.0900100 -0.4329300 -0.4329300 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11.3644416 8.9243179 3.7669661 9.2099144 1.3519110 9.9406481 11.3862739 10.1057073 10.6541915 -0.2331081 1.3519110 7.6798601 3.2264006 4.0148998 -0.2331081 5.0148998 4.6738617 3.4674099 10.4560953 NA 8.5935196 10.7844754 9.3100029 9.2964014 9.3798395 11.8741880 10.6210601 1.7669767 3.7669661 9.4429279 2.3519392 NA NA 4.5743256 11.9471288 5.3215602 8.8330602 7.2747658 10.0325861 9.9580302 -0.2331081 8.0384340 8.7298668 9.4072159 12.4015551 10.7690828 8.4604579 7.9518465 -0.2331081 7.2983522 9.5855532 10.7204399 12.7888185 2.0888879 13.3227524 8.5871501 5.8544346 6.3215602 6.7556554 8.7620315 8.6434879 5.9567955 9.0196363 9.7823860 2.3519392 9.3890227 6.6617881 7.4409514 13.2166355 9.9167180 10.0278905 5.9764232 10.0911514 7.0053753 5.0523724 12.0343838 8.6124609 10.8735339 9.6991857 9.5727148 10.0787192 8.3779957 10.0029851 7.1420100 0.7669767 10.8221178 5.4565499 11.5063297 3.8544346 9.4760548 11.2553132 10.2036825 10.4393962 6.7370188 13.2706725 10.2222981 10.6648164 11.6006517 10.2578218 NA -0.2331081 9.3003006 9.4982900 9.3080675 TCGA-A2-A4S2 62 0 NA 643 breast stage iiia t3 n2 m0 female 2012 NA yes infiltrating lobular carcinoma 5 white not hispanic or latino NA NA 2 1 5 3 4 4 3 3 2 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 2.774378e-07 17.1428571428571 25.7142857142857 0 31.4285714285714 25.7142857142857 9.8916248 10.2546934 11.7016483 9.1046918 8.0440766 9.5449926 10.8468099 9.4887516 10.7973682 13.0630448 11.5132627 10.5421368 2.1479253 12.8842203 2.2999187 9.1764325 6.9379893 8.0733843 10.5638888 12.8615853 -1.0220973 14.1064651 4.1479091 9.9275150 10.6200391 8.9723408 0.5629628 10.2948345 12.3622315 2.5629384 7.8359683 6.4537200 -1.0220973 3.5015538 9.8187653 9.7420296 9.9524020 11.2956826 10.2294698 11.1730519 4.4374208 11.4211899 14.9024751 8.3523096 10.4643196 11.3423956 10.5709115 4.7593476 NA 8.9538353 11.8470028 NA 10.1391192 6.4126156 6.5402304 5.1072694 9.8629211 11.3963671 10.5161763 11.8394620 12.3018865 7.9609808 10.3595303 10.2193747 10.8250447 10.8908767 4.7328770 10.7245017 12.3604763 -1.0220973 10.1603817 8.6784269 3.5635487 6.0969281 10.4902340 9.0100332 10.1207327 9.5954548 1.7853413 9.5161763 12.9444027 12.5861266 10.1008154 9.8069172 1.1956000 1.1973000 -0.0067813 -0.0067813 0.0000000 1.2680000 -0.0044312 0.0305910 0.6059300 0.6059300 0.6059300 -0.0348330 -0.0132270 -0.0245240 -0.0245240 -0.0245240 -0.0133350 0.0016642 -0.6870500 -0.0205490 -0.0383620 -0.0650450 -0.0650450 -0.0650450 0.5190900 0.5190900 0.5190900 0.5605500 -0.0783230 -0.6112400 0.0018030 -0.0067813 0.0000000 0.0061090 1.2680000 1.2680000 -0.0044312 0.0305910 0.0029133 -0.0235660 0.0073609 0.6059300 0.6053900 0.6053900 0.6053900 0.5802300 -0.0125760 -0.0349610 -0.0245240 -0.0245240 -0.6342400 -0.6342400 -0.0133350 -0.0287520 -0.0287520 -0.6052600 -0.0205490 -0.0205490 -0.0359930 -0.0465830 -0.0650450 -0.0650450 -0.0107840 0.5190900 0.5190900 0.5344000 -0.0062286 -0.0817380 -0.0817380 0.000 0.000 0.000 0.000 0.000 0.000 -0.605 0.000 0.000 1.157 0.000 0.000 0.000 0.000 0.000 0.519 0.519 0.000 1.235 0.596 0.596 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.268 1.268 0.000 0.000 0.000 0.000 0.606 0.606 0.605 0.605 0.107 0.107 0.000 0.000 0.000 0.000 0.000 0.000 -0.605 0.000 0.000 1.157 0.000 0.000 0.000 0.000 0.000 0.519 0.519 0.000 1.235 0.596 0.596 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.268 1.268 0.000 0.000 0.000 0.000 0.606 0.606 0.605 0.605 0.107 0.107 8.66273601 NA 5.78534130 10.94593406 11.10178544 7.48395762 11.55965872 8.89546380 9.47216301 0.56296283 11.57999022 11.63749722 1.78534130 5.33554042 3.93218404 7.73621046 3.06545168 12.30511893 11.10920128 11.12264561 9.34212202 6.20680535 7.64332302 10.12900385 7.11241344 5.86063014 -0.02195084 NA 11.22561825 6.74617166 5.45372169 7.81403765 7.04944998 10.73476050 10.53497232 4.10726939 9.41261557 -0.02195084 7.24945008 11.39821076 9.79417101 8.08389572 0.97797591 1.78534130 8.60003926 -0.02195084 3.29991866 NA 6.00035612 6.38737805 4.06545168 10.06146665 1.56296283 8.00589342 10.29087027 9.37352141 5.08651205 10.13974907 14.45647260 8.79656953 2.88487139 3.97798507 10.61778021 NA NA 0.56296283 1.56296283 12.452323 4.860630 7.887880 12.884220 9.472843 10.410007 12.861585 11.786750 8.798166 10.229470 13.305189 10.979044 8.953835 8.540230 1.562963 6.629039 10.281768 11.72029681 12.12184883 6.97798736 12.66459401 8.22591499 6.93798932 8.66448782 7.76262189 10.72763478 8.25643705 5.98921396 11.51326274 6.94953143 2.67843253 10.32228331 6.89087710 6.87692084 10.28575742 10.60643288 10.42403671 8.32450101 8.66448782 12.83664834 6.10726939 11.77914196 9.95240201 11.11273453 9.84912248 11.88619231 10.12073269 10.03394754 10.95276039 7.85450439 -1.02209733 9.02852992 10.01933844 11.84700275 5.83596954 10.13911925 7.38737805 11.50350815 9.86292106 7.34867505 12.32975481 10.05813869 9.56950970 12.85152758 11.02851625 4.83596954 -0.02195084 10.39478485 9.88337430 10.10275483 TCGA-A2-A4S3 59 0 NA 666 breast stage iib t2 n1a m0 female 2012 NA NA infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 4 3 5 3 1 2 2 9 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.595268e-06 7.282743e-07 14.0845070422535 28.169014084507 5.63380281690141 25.3521126760563 26.7605633802817 9.8291341 8.8299872 10.9700463 8.4519871 9.8678552 10.0640260 8.9509632 9.4564123 9.9735240 13.1646487 10.8740711 10.2250628 -0.8945901 12.2691229 0.1054099 8.2113817 6.0479876 8.9063732 7.4453236 12.9534114 1.4273916 12.9726554 5.5649055 9.5341893 11.5254334 6.9063735 2.6904394 9.6810124 10.7831929 1.1054769 9.1208882 7.1167006 -0.8945901 3.4274050 9.1250639 10.4257097 9.4160860 9.4115349 9.8503070 10.7252347 3.7493305 10.1614335 14.2999223 8.1428555 9.3450719 10.7067798 11.0078483 4.4273983 6.3908757 8.4783385 9.7538308 -0.8945901 10.2996144 4.4977912 6.3051461 5.4274017 10.0093550 11.5233257 10.6339274 10.9240554 13.1473035 7.9819902 11.0074714 9.1661691 11.0078483 10.3124875 4.2754019 11.2697517 10.0640260 1.1054769 9.9850565 10.2087611 3.9045612 4.9128271 10.4143810 9.5233257 11.1929361 11.7972167 2.1054769 7.0884671 13.5184399 10.9387587 10.2533141 8.4408638 0.05722600 0.02216400 0.23086000 0.01684500 -0.46195000 0.44833000 0.00000000 0.00000000 1.02740000 1.83840000 0.48389000 -0.48386000 0.02862200 0.02721600 0.02721600 0.48303000 0.07484000 0.01506700 -0.50877000 0.20289000 -0.48790000 0.00013863 -0.48081000 0.49614000 0.00346870 0.00346870 0.00346870 0.07225300 -0.47131000 -0.49767000 -0.05940400 -0.48743000 -0.49871000 -0.51928000 -0.51208000 -0.51208000 0.06222300 0.00000000 0.00000000 0.17242000 0.02834100 -0.50422000 -0.52205000 -0.52205000 -0.48176000 -0.48176000 0.02862200 0.03467700 0.02721600 0.02721600 -0.49089000 -0.50027000 0.07484000 -0.43083000 0.06422500 0.04783600 0.07829400 -0.49242000 -0.48050000 -0.47681000 -0.42538000 0.79181000 -0.53368000 -0.48932000 0.00346870 -0.50573000 0.01572700 -0.46110000 0.09928800 -0.513 -0.513 0.000 0.000 0.000 0.000 0.000 -0.492 -0.480 0.000 -0.477 -0.474 -0.474 0.000 0.000 0.000 0.000 -0.498 -0.498 -0.495 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 0.448 -0.064 0.000 0.000 -0.514 0.000 -0.020 0.484 0.000 -0.431 -0.162 -0.162 -0.513 -0.513 0.000 0.000 0.000 0.000 0.000 -0.492 -0.480 0.000 -0.477 -0.474 -0.474 0.000 0.000 0.000 0.000 -0.498 -0.498 -0.495 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 0.448 -0.064 0.000 0.000 -0.514 0.000 -0.020 0.484 0.000 -0.431 -0.162 -0.162 7.9192543 1.1054769 6.0362110 10.8252899 12.8234709 5.9130857 10.9136330 7.7567758 9.5914535 1.9128414 11.8986701 12.1300571 5.4805140 -0.8945901 3.4274050 7.6715276 4.2754019 10.7188023 12.0074714 10.1187959 10.0384262 2.6904394 8.6829019 10.6221582 6.9192543 4.7778983 3.6290302 NA 10.6206802 6.3149267 6.4274017 8.7618982 8.0998264 11.1750975 9.7302687 3.4274050 10.6833741 0.1054099 6.9128283 11.0737800 8.4296536 7.2552203 NA 4.8868330 8.0798879 5.1498690 3.6290302 NA 6.4274017 5.2779996 3.8603570 11.4352696 NA 8.9603417 10.3002301 10.0465208 5.7778983 10.8282807 13.7405111 8.4586199 4.7493305 4.3149285 10.9708199 3.4274050 NA 0.1054099 4.1054769 11.498630 7.846940 8.242464 12.269123 9.031769 11.077017 12.953411 9.777014 9.861195 11.119145 11.994026 10.009355 8.478338 8.376936 4.427398 8.469608 11.524380 10.3821793 11.5801932 5.0123631 12.4255686 8.1982304 6.6523675 9.1862908 10.6724786 9.3340274 7.6446322 8.6092988 10.8740711 7.9128283 2.2753945 9.9248541 8.3534009 9.9552380 11.9862047 9.9055642 10.0138659 8.0884665 9.9071817 9.7411914 6.3908757 10.9584201 9.4160860 9.6781735 10.7393766 11.3798514 9.6951244 11.2257111 10.1809524 7.8966364 0.1054099 8.9695511 6.4076094 9.7538308 6.4717955 10.2996144 6.4977912 10.3365804 10.0093550 7.5063528 12.8611954 10.1047686 10.0273141 12.4029627 10.4875568 2.1054769 1.6904171 10.4063977 8.9572222 9.0726994 TCGA-A7-A0CD 66 0 NA 1165 breast stage i t1 n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 NA 2 2 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.774378e-07 33.3333333333333 12.5 4.16666666666667 37.5 12.5 10.9580001 10.3380201 11.8408255 9.4687289 8.9907450 8.9766538 10.5688172 9.0662709 10.5159200 13.7916042 9.8837664 10.6294117 0.8033924 13.8859856 5.2628240 8.1462082 8.0639203 8.1550682 9.4363882 13.6107143 2.6107473 14.6799099 1.9188823 9.1169337 10.8748554 7.5847528 NA 8.9522931 9.7968031 1.6778465 8.1298224 6.0764116 -1.7814048 4.8183444 9.9188702 10.9012056 9.6541007 11.5253466 9.4064010 11.1069835 3.2628240 11.9743612 15.0296295 7.0773755 8.9907450 11.5740568 12.1476889 4.5934673 -1.7814048 10.6997254 11.5287592 -0.7816528 10.9979447 4.2845215 4.1726235 4.8183444 10.2682791 11.8028058 9.9598975 11.7444406 12.8221727 8.4639833 11.3060590 11.3632623 11.2698093 10.9940407 5.5582799 12.5624489 12.6110833 NA 10.0552698 9.1380388 3.3927570 4.3883549 10.0505293 9.4980410 10.9380332 10.6171741 2.2184402 7.1372935 13.4372207 11.8986801 9.9322465 8.7082783 1.110100 1.207200 0.550180 0.550180 0.000000 0.593860 1.471400 -0.683050 0.573260 0.573260 0.562230 -0.065625 -0.053881 0.527480 0.527480 0.527480 0.542590 0.542590 -0.752070 -0.073877 -0.089302 1.436900 1.436900 1.436900 0.362150 0.362150 0.362150 0.475640 -0.180120 -0.052801 -0.049154 0.550180 -0.125950 0.000000 0.593860 0.593860 1.471400 -0.683050 -0.683050 -0.785750 -0.700730 0.567740 -0.078278 -0.078278 -0.078278 -0.078278 -0.053881 -0.067405 0.527480 0.527480 0.527480 0.527480 0.542590 0.542590 0.542590 -0.673430 -0.073877 -0.073877 -0.089302 -0.808020 -0.765610 1.436900 0.560450 0.268120 0.362150 0.475640 -0.084926 0.969250 0.969250 0.000 0.000 0.527 0.527 0.543 0.543 -0.673 0.000 0.000 -0.180 -0.697 0.671 1.437 0.560 0.560 0.362 0.362 0.000 1.110 0.476 0.476 0.000 0.969 0.000 0.000 0.550 0.550 0.000 0.000 0.594 0.594 1.471 0.788 -0.667 -0.667 0.562 0.562 0.000 0.000 0.127 0.127 0.000 0.000 0.527 0.527 0.543 0.543 -0.673 0.000 0.000 -0.180 -0.697 0.671 1.437 0.560 0.560 0.362 0.362 0.000 1.110 0.476 0.476 0.000 0.969 0.000 0.000 0.550 0.550 0.000 0.000 0.594 0.594 1.471 0.788 -0.667 -0.667 0.562 0.562 0.000 0.000 0.127 0.127 8.5403586 -1.7814048 6.8873157 10.3194213 11.0069449 7.7153045 11.0441843 7.9297188 8.0406349 -0.1966076 11.1211824 11.1350713 8.3732484 0.8033924 4.1010701 7.7958591 3.6107473 10.5627264 11.6876907 10.2007111 9.4454447 NA 7.5038329 9.9071180 6.3528574 5.1491659 NA NA 11.0920668 7.0354139 5.7730205 8.2366309 5.7958604 10.1051292 10.3506088 3.5403621 8.6829763 NA 8.5759824 13.0018380 8.6193099 7.9565225 NA 0.5403249 8.5049882 4.5038321 4.3477153 -1.7814048 2.7419846 6.9809119 1.0258084 10.1033641 NA 6.5538213 10.9281605 10.1083146 3.8033924 10.4168755 12.5320221 6.6982101 1.2184092 2.2184402 11.3295661 3.6446985 NA NA -1.7814048 13.229299 5.063921 8.304567 13.885986 9.662177 10.870827 13.610714 12.809544 9.381451 11.170808 12.761100 11.845394 10.699725 9.304567 1.025808 8.214198 11.690867 10.958211 11.391795 8.184215 13.311558 8.866788 3.305898 9.166798 9.956455 10.046634 5.718277 9.126823 9.883766 7.009594 1.218409 11.117410 4.773020 7.342991 11.390233 7.784484 10.300580 8.468729 8.652016 13.748379 4.284522 11.140623 9.654101 10.682210 10.006741 11.079517 9.415647 10.106793 10.648099 9.515920 NA 8.684344 6.038098 11.528759 4.305890 10.997945 5.979982 10.099544 10.268279 6.979982 13.820926 9.791604 10.542892 12.513984 10.424834 NA 5.334776 10.786624 10.523067 9.670672 TCGA-A7-A0CE 57 0 NA 1074 breast stage iia t2 n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.899903e-06 5.58795e-07 14.1304347826087 14.1304347826087 6.52173913043478 27.1739130434783 38.0434782608696 9.3304316 9.9080314 11.4681768 9.1144823 8.9110824 8.4023035 9.1267829 11.0125811 10.5308427 13.4073540 11.1105060 10.6140210 -0.5606428 12.8757935 3.3463045 12.0306959 4.7248085 8.8035419 9.2051078 7.8967883 0.4393572 10.2503805 8.3745722 10.1897626 10.6682260 4.1118326 0.4393572 7.9590433 11.6591809 0.4393572 6.8100947 8.3994091 1.2467729 4.2973895 9.3863137 10.6555469 9.3914204 9.5453159 10.2563909 11.2858771 2.6873295 9.6944359 14.4432765 8.0568013 8.9775865 11.3317604 11.5659505 5.4394070 0.4393572 9.5367811 10.7522902 NA 10.5235514 4.8656714 4.5686888 8.2042787 8.2595860 12.0598563 9.1741170 11.2172790 12.5308427 8.0092632 11.4268490 10.9664175 10.6378524 10.9622340 4.8144479 11.7727025 7.3701442 NA 10.0135277 10.4492359 3.7336580 4.6682269 11.4919754 10.5165568 10.4113100 9.4776405 3.7248140 7.9997402 11.8733839 11.9531349 10.4834598 9.9292553 1.4767000 0.9013600 -0.5080200 0.5158200 0.0076813 0.0548460 0.6673900 0.5765000 0.0796350 0.0796350 0.1493900 -0.0276300 -0.0535700 -0.4639400 -0.4639400 -0.0106040 0.6255700 -0.0340450 0.4584200 -0.4919000 0.4449900 0.0000000 0.0000000 0.0975860 0.4841100 -0.0909830 -0.0909830 -0.0078445 0.0638390 0.0194050 -0.4268800 -0.5080200 -0.4813100 -0.4450900 0.0181460 -0.0484370 0.6673900 0.0473170 0.0938100 0.6146700 0.5409100 -1.2929000 0.0297900 0.0297900 -0.4662300 -0.4561500 -0.0535700 -0.0535700 -0.4639400 -0.4639400 -0.5914300 -0.5914300 0.6255700 -0.4671400 -0.4671400 -0.4624500 -0.5097700 0.2966500 -1.0322000 -0.4766700 0.0000000 0.0000000 0.0278210 -1.0369000 -0.0909830 -0.4367700 0.3948200 -0.4620300 -0.4746000 0.000 0.000 -0.464 -0.464 0.626 0.000 0.000 -0.492 0.119 0.427 0.000 0.000 0.000 0.000 0.000 0.484 0.000 0.000 0.000 -0.429 -0.429 0.000 -0.475 -0.477 -0.477 -0.492 0.000 -0.516 -0.516 0.000 0.000 0.000 0.000 0.550 0.550 0.000 0.000 0.000 -0.456 -0.635 -0.477 0.000 0.000 -0.464 -0.464 0.626 0.000 0.000 -0.492 0.119 0.427 0.000 0.000 0.000 0.000 0.000 0.484 0.000 0.000 0.000 -0.429 -0.429 0.000 -0.475 -0.477 -0.477 -0.492 0.000 -0.516 -0.516 0.000 0.000 0.000 0.000 0.550 0.550 0.000 0.000 0.000 -0.456 -0.635 -0.477 9.1656256 NA 8.0922524 10.5344746 11.7680822 6.0618259 10.9350125 8.9362410 7.7056552 3.1942920 11.1990875 11.8300895 6.1398480 0.4393572 4.5479310 9.3447943 3.7613385 9.4131047 11.3415940 11.6129283 9.4450318 0.4393572 8.6093324 9.8057295 5.9232229 8.1741167 2.2467729 -0.5606428 10.0755788 3.7248140 11.4558674 7.5215565 9.7460386 9.3462077 11.4291566 -1.5606428 9.8901031 5.3097728 8.5148864 11.8408202 7.9668844 8.1605063 NA 2.4394104 9.1724228 4.8988372 3.7613385 -0.5606428 3.5268701 3.4591037 0.7613704 11.6267594 3.6093295 12.1122746 10.4724861 9.9688378 4.3462974 9.2738783 12.6098019 9.6754215 2.8988468 3.1398460 10.7468927 0.4393572 5.9939958 1.2467729 6.1536534 9.879622 9.215840 8.587884 12.875794 10.429036 12.318799 7.896788 12.001173 9.571264 11.435351 13.367694 11.486702 9.536781 7.941244 1.609329 7.489256 10.652815 10.940249 12.032798 5.334225 14.695412 8.681391 3.994000 8.606825 9.835477 9.536498 4.547931 5.259585 11.110506 9.960026 1.761328 10.567724 7.867767 8.678886 12.623663 9.123279 10.966884 8.001650 9.233011 10.068764 12.131914 10.034870 9.391420 9.718437 10.016836 11.685554 10.259985 11.205522 10.781204 9.288030 -1.560643 8.837756 12.409141 10.752290 6.322051 10.523551 5.687335 9.987251 8.259586 8.034254 13.802036 11.246360 10.755689 12.663409 10.164347 2.246773 NA 10.525544 10.276247 9.084165 TCGA-A7-A0CG 78 0 NA 1043 breast stage iia t2 n0 (i-) m0 female 2010 NA yes mixed histology (please specify) 0 white not hispanic or latino 2 2 3 NA 4 3 3 3 4 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.387189e-07 31.8181818181818 18.1818181818182 0 27.2727272727273 22.7272727272727 9.8872470 9.9915975 11.7946556 10.0669045 7.8305437 9.7327837 10.1479876 9.6527466 9.5279189 12.6417136 10.7721682 10.6506347 4.9174222 12.5563038 4.0081910 8.9993628 6.2726858 8.6520429 11.1197677 13.0068115 0.9725456 12.6812157 7.9566962 8.9103780 10.7018437 5.4055227 NA 9.5886706 9.7167240 5.0935771 7.5515014 7.4515342 0.6506727 5.8404582 10.2238085 10.4648166 9.4992577 12.4560763 10.3870367 11.8127113 6.8003822 11.5968099 14.1952974 8.4014756 9.4409831 11.3068361 11.1031334 5.4450513 0.6506727 9.4835248 12.8281321 -0.3494192 11.4136396 5.6048304 7.2128767 4.6279161 10.7663286 11.9572661 10.5144339 12.0304192 12.8530647 7.5393783 10.7184052 10.4308218 11.6792315 11.2025833 5.2355969 12.3001155 9.1324342 NA 9.9250129 9.3545383 2.8333354 6.0343390 10.4740020 10.2542611 9.4827336 10.2033038 4.2052205 10.0642626 13.1608426 11.8961874 10.2204903 9.3648803 0.48148000 0.95160000 -0.00296500 -0.00926660 -0.01326400 0.02721600 0.00555290 -0.00742530 0.03002900 0.03002900 -0.03305700 0.00959490 0.02669400 0.01335300 0.01335300 0.00263570 0.05224100 -0.01037000 -0.01285100 0.01866300 0.02834100 -0.39796000 -0.39796000 -0.39796000 0.08377600 0.08377600 0.08377600 0.05565800 -0.01731800 -0.01731800 -0.02123500 0.00610900 -0.01326400 -0.01876500 -0.01601700 -0.01601700 0.00555290 -0.00742530 0.00805670 0.01488800 0.01081200 0.00027728 0.03298600 0.03298600 0.03298600 0.03298600 0.02669400 0.03976100 0.01335300 0.01335300 0.00263570 0.00263570 0.00527490 0.00583090 -0.38403000 -0.01285100 0.01866300 0.01866300 0.02834100 -0.41212000 -0.39796000 -0.39796000 -0.43007000 0.08377600 0.08377600 0.05138700 -0.01257600 -0.38437000 -0.38437000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 -0.418 -0.398 -0.398 -0.430 -0.430 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.384 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 -0.418 -0.398 -0.398 -0.430 -0.430 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.384 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3212909 3.1100625 6.0600258 9.8484657 11.2073803 6.7363992 11.1987342 9.7870491 8.0036050 4.2355969 12.2758870 11.0795575 2.8205670 2.9725640 2.9725640 8.3406326 4.5086188 10.6432191 11.7509685 10.5533867 9.4080248 5.8003822 7.4515342 10.3030316 8.1839643 7.8985621 -0.3494192 0.9725456 11.6876668 6.8842548 8.6632592 7.9406536 7.1141588 9.5893468 10.3988276 5.3371366 7.7327841 NA 8.7460319 13.1216113 7.1424880 7.7032025 0.2356045 6.6618622 8.4579898 4.6730023 3.8205568 -0.3494192 7.4803572 4.3230602 4.2944884 10.5309835 0.2356045 9.6778496 10.4918059 9.8453916 5.4835256 11.1467395 12.7827328 9.7180691 3.0429595 4.6048304 10.7347787 2.3510629 NA 0.6506727 0.9725456 12.198782 5.431994 8.485106 12.556304 10.636832 11.526000 13.006812 12.359180 9.260986 11.020232 13.204024 9.532513 9.483525 8.917421 NA 6.835510 11.451535 11.220016 12.174932 7.126368 14.342020 9.177134 8.081087 8.507060 7.828054 10.507706 7.695029 8.287259 10.772168 5.716725 2.235605 11.549803 4.738098 6.739158 11.579338 11.078733 10.856733 7.877047 8.140483 12.203184 8.014769 10.379316 9.499258 10.529835 9.492199 11.289749 9.298093 10.783134 10.780884 9.680612 -1.349235 9.569468 7.883296 12.828132 8.085263 11.413640 7.593149 10.599732 10.766329 7.492985 14.457839 10.028930 11.093837 12.327143 10.001574 4.378553 1.458014 10.941518 10.935170 9.834270 TCGA-A7-A0CH 79 0 NA 1079 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 NA 2 2 4 4 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 18.1818181818182 13.6363636363636 0 27.2727272727273 40.9090909090909 10.7254110 10.0465956 12.0340477 9.7750884 8.2374547 9.1811214 10.6210092 9.6938507 9.6004881 13.2338670 11.4378645 10.4385447 3.1951428 12.8989652 4.0122826 9.3351824 6.6976446 8.2724684 9.9152660 14.0811671 1.1247252 13.9205102 7.0649216 9.4587419 10.7932851 7.9877017 NA 8.8362495 9.7482704 1.6101803 7.6451771 7.0835974 NA 3.8472253 10.2090316 10.2021045 10.6041307 12.4122362 10.4534296 11.6416366 6.9926506 11.7915113 14.4969123 8.8251945 9.6069415 11.8238065 11.6303677 4.0122826 2.7097097 8.9100436 10.9714986 NA 11.1451791 5.1951428 4.8028291 4.2946796 10.2891589 11.7511938 10.4143125 11.5990690 12.9375737 8.4752519 11.0216925 11.0387212 11.6002855 10.9889408 4.9727524 12.5124489 11.8024743 -0.1971037 10.0256214 8.8321137 3.3270118 4.2946796 10.8746241 10.4525318 9.9557452 10.0412313 3.5577164 9.8776371 12.7568411 12.3489976 10.3783659 9.7164640 1.4257e+00 1.4405e+00 9.4491e-03 -4.9844e-03 -4.8461e-03 1.4190e-02 -5.2610e-03 -1.3880e-02 2.0203e-02 2.0203e-02 1.2942e-02 3.0522e-03 1.0006e-02 -5.5444e-04 -5.5444e-04 -5.5444e-04 -7.4720e-03 -7.4720e-03 4.1632e-03 9.7064e-04 4.5800e-03 6.8155e-05 6.8155e-05 9.3098e-03 -8.8526e-03 -8.8526e-03 -8.8526e-03 1.7963e-02 -6.7813e-03 -6.7813e-03 -8.5766e-03 9.4491e-03 -4.8461e-03 -4.8461e-03 -5.2610e-03 -5.2610e-03 9.1705e-03 -1.3880e-02 -1.3880e-02 6.1090e-03 6.1090e-03 2.0203e-02 0.0000e+00 0.0000e+00 0.0000e+00 0.0000e+00 1.0006e-02 1.0006e-02 -9.5926e-04 -5.5444e-04 -5.5444e-04 -5.5444e-04 -7.4720e-03 -7.4720e-03 -7.4720e-03 -4.1546e-03 9.7064e-04 9.7064e-04 1.6621e-02 -7.7744e-01 6.8155e-05 6.8155e-05 8.4743e-03 -8.8526e-03 -8.8526e-03 1.7963e-02 -2.9584e-02 -1.0460e-01 -1.0460e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.777 -0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.426 0.000 0.000 0.000 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.777 -0.001 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.426 0.000 0.000 0.000 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.4303606 NA 5.9217672 10.1498942 11.5566700 6.8561005 11.8952534 7.9788998 8.8635225 -0.1971037 11.6938508 10.6982277 0.8028136 6.0219949 0.3878037 8.4610382 7.0219949 10.2901641 11.4538782 11.1881497 9.5518580 6.2037062 7.8526749 9.8348724 5.1951428 2.2622527 0.8028136 NA 10.9649031 5.9525735 6.3185265 8.3535734 4.5577164 9.9278913 10.8896262 4.6101803 8.0073979 NA 7.9008584 12.4489352 8.1908440 6.7511932 NA -1.1972691 8.8823114 2.7097097 3.0507455 1.1247252 3.8472253 5.7927591 1.9727662 10.1592785 -1.1972691 7.0742892 10.5149236 9.7089656 3.7097207 9.2683930 12.1090307 7.7599288 1.8028136 3.0507455 11.3837917 2.8028343 NA 2.1247582 -0.1971037 13.259031 5.142675 8.711219 12.898965 10.279573 11.417306 14.081167 12.940378 8.946210 11.022600 13.887801 8.814054 8.910044 9.879642 -1.197269 7.561050 11.905950 10.885641 11.937574 7.932110 14.380579 9.196217 5.733563 9.234324 8.345858 10.353443 5.733563 6.703693 11.437864 5.780105 4.417535 10.844143 5.932108 5.232277 11.017146 10.324427 10.779749 8.492825 8.298682 13.395108 3.050745 12.397372 10.604131 10.421671 9.843801 11.224628 8.913962 9.621409 10.548921 9.322463 -1.197269 9.196861 7.322463 10.971499 2.709710 11.145179 7.947485 10.278053 10.289159 7.254037 13.480931 10.070784 10.627388 12.952097 9.839000 NA NA 10.916569 10.850632 9.891615 TCGA-A7-A0CJ 57 0 NA 931 breast stage iia t2 n0 (i-) m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 1 1 NA 2 2 1 1 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.710324e-07 3.121176e-07 28.9473684210526 7.89473684210526 5.26315789473684 39.4736842105263 18.4210526315789 9.223500 9.556317 11.712598 8.923940 9.121621 9.582118 10.007243 9.498778 9.101938 13.332342 10.986461 10.398275 2.501031 11.804663 3.117712 7.662922 7.652136 8.612344 11.444331 13.411127 NA 14.173312 2.294577 9.238901 11.563350 3.638537 -1.405834 9.622050 11.612518 NA 7.016209 5.933993 NA 3.638537 9.278016 9.562091 8.923940 11.530230 9.091996 10.931766 10.922258 12.692011 14.191061 4.979403 10.778399 11.318018 10.138142 3.238007 NA 9.291980 10.972980 NA 10.075943 4.822965 4.743892 4.681607 9.866190 11.946739 10.442375 11.257702 13.085997 6.884163 11.660906 11.071902 11.199160 10.994756 3.401494 13.246429 11.275602 NA 9.669623 9.633063 3.805158 4.208853 10.717942 9.734335 10.492367 9.842664 2.916075 9.778399 11.442375 10.686571 9.809677 9.328853 0.413790 0.413790 -0.716400 0.927360 -0.118010 1.410800 0.312740 -0.160770 0.415800 0.415800 1.417400 -0.074277 0.458370 0.423350 0.407610 0.407610 -0.694860 -0.094724 -0.667530 0.471180 -0.667720 -0.656960 -0.656400 0.986590 0.369860 -0.128880 -0.128880 1.159900 0.497010 -0.104870 0.283060 -0.674440 -0.688150 0.300950 0.385180 -0.177900 0.312740 -0.160770 -0.144770 -0.685790 0.431760 -0.652020 -0.633680 -0.637570 -0.072274 -0.113380 -0.974730 -1.279700 0.385180 0.407610 -0.676920 0.446300 -0.666700 -0.094724 -0.094724 -0.668640 0.450540 0.450540 -0.091023 -0.613540 -0.660680 -0.656400 1.457000 0.803640 -0.128880 1.120100 -0.118900 -0.148110 -0.148110 -0.620 -0.620 0.423 -0.254 -0.111 -0.111 -0.669 0.471 -0.640 -0.571 -0.571 -0.656 -0.656 1.457 1.457 0.370 0.241 -0.105 0.309 1.196 1.196 -0.119 -0.148 0.283 0.283 -0.181 0.746 -0.671 -0.122 0.372 0.372 0.313 0.168 -0.130 -0.130 0.673 1.325 -0.551 0.000 -0.537 -0.537 -0.620 -0.620 0.423 -0.254 -0.111 -0.111 -0.669 0.471 -0.640 -0.571 -0.571 -0.656 -0.656 1.457 1.457 0.370 0.241 -0.105 0.309 1.196 1.196 -0.119 -0.148 0.283 0.283 -0.181 0.746 -0.671 -0.122 0.372 0.372 0.313 0.168 -0.130 -0.130 0.673 1.325 -0.551 0.000 -0.537 -0.537 9.3755035 -1.4058337 3.4521210 11.2127587 12.6485785 6.7754457 10.6756272 8.3831392 7.8835402 NA 10.6095588 11.5197575 7.3356110 0.5941663 1.4015213 8.8702682 2.7640701 10.7728086 11.8343388 10.8349351 9.0109412 8.6011709 7.9756869 7.7104876 5.1487308 1.5941663 0.1791288 NA 9.4349217 7.7026679 5.4396331 9.6385378 4.1177034 11.0971445 10.3561105 0.1791288 9.1734598 NA 5.4270329 12.5027240 8.2216775 7.0204089 NA NA 7.5997686 NA 3.4521210 NA 3.4014939 2.6816067 1.5941663 10.4809834 0.1791288 6.2594796 10.7990205 9.8114956 3.2380072 9.1477730 13.0656285 6.4645082 2.0535632 2.7640701 12.7759172 2.4014939 NA NA -1.4058337 13.374017 5.037088 8.363981 11.804663 9.538124 10.278892 13.411127 12.074682 8.480648 10.219853 12.307638 11.474301 9.291980 9.892779 7.524881 8.359016 10.180514 10.8274639 11.8297093 6.6548394 12.5972189 8.2823939 8.7298532 9.7046270 8.2612553 10.2172159 5.1940555 3.8420737 10.9864611 6.3885598 -1.4058337 11.1809836 6.2945840 8.6123024 10.4771688 9.1049080 10.4099273 8.0879990 10.0673421 11.0177850 3.7640701 10.8731681 8.9239401 10.8142197 10.6011710 10.0072427 9.1477730 7.9821608 10.4111274 8.2701009 0.1791288 8.4988987 5.6468193 10.9729804 2.5941424 10.0759432 6.2088528 10.7712518 9.8661903 7.0245967 13.3576570 11.1504103 9.6018718 12.0942387 11.9705405 1.4015213 0.5941663 10.4844080 9.9971558 9.3075303 TCGA-A7-A0D9 37 0 NA 1139 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 1 4 3 1 4 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.387189e-07 15.7894736842105 36.8421052631579 0 15.7894736842105 31.5789473684211 10.5302092 10.1953710 12.2322545 9.9460498 7.3008385 8.6694641 9.7823583 9.8044458 10.3661962 15.2121323 10.6994199 10.9315258 2.7196435 12.3694550 3.7640276 9.8630207 6.7364452 8.8044460 6.9484560 12.7387069 -0.2803346 14.3172245 5.0234195 9.2391066 11.1149039 5.3343466 0.3046279 7.8097501 9.3840848 1.3046279 7.1459026 7.6325271 2.1790651 4.3045987 10.5438007 9.8864282 9.3814155 10.1215836 10.3598824 12.1857140 6.6083805 10.1872431 15.1273202 8.6906060 10.4573074 11.9593852 11.6078100 2.6265326 7.5745057 9.2144930 11.3592043 1.0415934 11.1664623 5.0050406 4.2114873 4.5009996 10.5022263 11.6345831 10.1999228 12.3168753 13.1021264 8.6220126 11.3248855 10.5549458 11.8049440 11.3603344 5.3778491 11.1783005 11.4021933 -1.2803346 10.1469503 9.7971208 3.5305952 3.9290903 9.7019181 10.7213975 10.2104883 10.3172246 3.3045987 7.2510193 11.9031178 11.3389405 9.9014109 8.9057516 0.00305220 0.00305220 -0.00526100 -0.01849000 -0.00553750 -0.01064600 -0.00802440 -0.00802440 3.65690000 -0.77431000 3.19280000 0.00612360 0.00416320 -0.00830050 -0.01601700 -0.01601700 0.00000000 0.00000000 -0.00843850 0.00527490 3.65690000 -0.70899000 -0.74133000 0.07988000 0.03848900 0.03848900 0.03848900 3.65690000 0.00305220 0.00305220 -0.01087800 0.00346870 -0.00484610 -0.01106000 -0.01064600 -0.01064600 -0.00802440 -0.00802440 -0.00802440 0.75375000 0.73910000 -0.83639000 -0.78975000 -0.78975000 -0.77795000 -0.77795000 0.00416320 0.00416320 -0.00830050 -0.01601700 -0.01601700 -0.01601700 0.00000000 0.00000000 0.00000000 -0.00843850 0.00555290 0.00555290 -0.81570000 0.02735700 -0.76723000 0.04075100 0.00451480 0.04651300 0.03848900 0.00027728 -0.00575620 0.03637000 0.03637000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.733 0.733 -0.820 -0.820 -0.778 -0.778 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.733 0.733 -0.820 -0.820 -0.778 -0.778 0.000 0.000 9.5009972 NA 8.4644714 10.4753596 11.6723788 5.9926869 10.4882354 8.8746328 8.7567178 -0.2803346 10.3643951 11.2448133 2.3045987 0.7196654 5.3634935 8.0881437 4.2431968 10.0296822 11.7904293 10.5079480 9.0268382 1.3046279 8.1055000 10.0667052 5.4061387 9.0119590 5.2894915 -1.2803346 10.0393096 6.0594872 9.0234184 8.3306624 8.8706542 10.4681155 10.2984819 2.9675560 7.9934332 1.3046279 8.1011805 12.3414604 8.5509449 7.3045996 -0.2803346 7.1994181 7.3158270 NA 5.2114912 0.3046279 3.0415584 5.0081821 2.3045987 10.1087310 NA 8.1438036 10.5485673 10.0142582 3.9675652 8.5445963 11.5241719 7.2353374 2.0415584 2.8071076 11.6918993 2.9675560 NA 3.6265326 6.6444505 14.341871 7.392063 8.850208 12.369455 10.390316 10.484095 12.738707 17.220884 8.995762 10.683256 12.241606 11.103072 9.214493 8.399118 4.077192 6.796454 15.375657 10.569824 12.662152 5.348994 13.309164 9.002726 4.392063 9.489475 8.032520 9.948029 4.243197 10.149044 10.699420 6.145902 2.041558 10.600751 4.363494 7.257050 11.845858 9.782358 10.771526 9.168786 8.625025 11.072233 3.673839 12.833293 9.381416 9.711868 9.941225 12.006773 9.585371 10.423973 10.407451 9.535821 4.111958 8.714260 7.153431 11.359204 4.304599 11.166462 7.644450 10.214993 10.502226 6.938806 13.794072 10.789087 10.121584 12.076777 10.389851 1.041593 6.873747 10.672379 10.633649 9.507540 TCGA-A7-A0DA 62 0 NA 1085 breast stage iia t2 n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 6 1 5 5 5 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.682216e-06 4.749757e-07 7.6271186440678 13.5593220338983 2.54237288135593 49.1525423728814 27.1186440677966 11.1500157 8.8596118 11.2323953 9.3959514 8.2346010 7.8884255 9.6204922 10.0104710 11.7181660 13.0724322 10.0230547 10.3026985 3.0646759 12.2980081 2.8802545 10.0174756 7.1108174 8.7371013 9.3829929 4.7958604 NA 10.1112544 9.0583503 9.3675506 11.1966359 6.3456323 -0.5792751 9.0592558 9.8990839 4.6302715 10.3213093 7.1790432 -1.5790595 3.1212641 9.7833116 10.2807428 9.2741293 10.0095345 10.0488096 11.6783550 8.1923091 6.1073196 15.4575623 7.8341303 9.0281503 11.0121084 10.5335852 3.5082765 2.4208327 9.3574579 10.0184069 -0.5792751 11.0707496 3.9754101 5.8131373 4.9126738 10.3790101 11.3135524 9.7991147 11.4853942 12.6000292 8.0914761 10.2477656 9.9474609 10.8352409 11.2834572 3.9443806 12.6124189 9.9201675 NA 11.1273159 9.5832112 3.8138222 5.0646759 11.2325959 10.6302732 10.7416204 10.6829147 4.0646759 8.8099134 12.6413493 11.6622072 9.4151732 9.8115263 0.916220 1.244700 0.184720 0.169260 -0.263600 -0.691150 0.168050 0.184500 -0.272960 -0.272960 1.644700 0.987010 -0.268170 -0.252610 0.153380 0.153380 -0.236920 -0.236920 1.108000 0.707570 0.767340 -0.291540 -0.291540 0.230240 0.537490 0.521880 0.474260 0.152330 -0.246030 0.535380 -0.766890 -0.270210 0.473750 -0.724230 -0.741680 -0.724110 -0.275830 0.190410 -0.271640 -0.288100 0.391310 -0.271520 0.978530 -0.252730 -0.275950 -0.279290 -0.268170 -0.748980 -0.734680 0.153380 0.470840 -0.744470 -0.236920 -0.045364 -0.047666 0.354630 -0.274160 -0.259020 -0.421120 -0.279770 -0.291540 -0.287030 -0.721280 -0.298270 0.034959 0.707760 0.505330 -0.284060 0.183440 0.719 -0.268 -0.265 -0.265 -0.168 -0.168 0.355 0.000 -0.421 -0.277 0.000 -0.117 0.170 0.202 -0.047 0.000 0.000 0.709 0.709 0.746 -0.280 0.505 -0.284 0.265 0.053 0.550 0.550 -0.255 -0.255 -0.274 -0.724 0.184 0.184 0.320 0.593 0.168 0.431 -0.276 -0.276 0.721 -0.398 0.719 -0.268 -0.265 -0.265 -0.168 -0.168 0.355 0.000 -0.421 -0.277 0.000 -0.117 0.170 0.202 -0.047 0.000 0.000 0.709 0.709 0.746 -0.280 0.505 -0.284 0.265 0.053 0.550 0.550 -0.255 -0.255 -0.274 -0.724 0.184 0.184 0.320 0.593 0.168 0.431 -0.276 -0.276 0.721 -0.398 8.306516078 -0.579275081 4.795860437 10.714291460 11.589335282 6.419805159 11.385341243 9.569575964 8.413035922 NA 12.456478117 10.868636613 2.742739233 NA 6.013276886 9.484888937 2.880254513 10.298487407 11.582896400 11.134635907 9.252127041 -1.579059544 8.218481382 10.447343322 5.687606636 3.278802538 1.420832692 2.228172218 9.988775988 NA 6.782763691 8.698107326 8.229784011 11.154474985 10.634531648 1.880254513 9.070076120 NA 7.169013010 11.884216509 8.228174624 7.715440399 0.420832692 2.420832692 7.647231751 4.093247468 5.189006141 0.005759269 2.327716103 3.669888496 5.990675822 10.644821571 3.508276515 11.288484707 11.035299624 10.146186155 3.880254513 8.358929385 12.403635210 6.692283513 2.668754533 3.847084915 9.871515642 4.649638450 7.729159143 NA 7.291184516 13.641992 6.644821 7.773967 12.298008 10.823299 10.841570 4.795860 12.825230 8.565478 10.359297 13.744543 11.582896 9.357458 8.766225 -1.579060 8.447343 11.118005 10.950494 11.768856 4.778372 14.786116 9.328462 5.215236 9.949762 8.015145 10.108257 5.872031 7.437628 10.023055 7.898578 7.366264 10.490605 8.396668 7.340637 12.780638 10.219697 10.538138 7.838673 7.946341 8.341173 4.035527 10.904520 9.274129 10.070525 9.710262 11.706078 11.279384 11.320932 10.244585 9.432746 -1.579060 10.082843 6.892495 10.018407 4.253709 11.070750 8.553962 11.286553 10.379010 7.598389 14.509318 10.126020 10.897819 12.741761 10.791507 NA 3.778377 11.052679 9.618037 9.827025 TCGA-A7-A0DB 56 0 NA 1007 breast stage iia t2 n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 2 NA 2 2 4 4 4 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 3.81477e-07 17.1428571428571 34.2857142857143 2.85714285714286 17.1428571428571 28.5714285714286 10.3516444 9.7891409 11.8212707 8.9413939 8.1396506 9.0672996 10.4592243 9.2224935 9.4161794 13.2897839 11.1049327 10.1099438 4.3440118 13.0371670 3.6604837 10.1114437 6.2085446 8.1337577 9.4670565 12.7959975 0.6160753 13.5111429 8.4910698 9.5821900 10.5597021 7.1474695 NA 12.2118447 8.8734761 3.3709733 8.1079415 6.8352571 -1.3838305 3.0755155 9.6515748 9.9675798 10.1312955 10.0062573 10.1716362 11.6287129 1.2010692 11.2765300 14.1535495 7.2023648 9.8527005 11.3941655 10.8808242 4.5933657 4.2010535 8.7709067 12.2137918 NA 9.8758317 5.8544919 5.9470045 5.8352571 10.3579766 11.6698446 11.0548802 11.9471453 12.5777189 8.4833672 10.8866757 10.5663855 11.1610528 10.7950644 4.6821800 12.1469824 10.7369742 -1.3838305 10.1029234 8.6047730 3.9018613 5.1859458 10.8598575 10.0836939 9.8273683 9.6556930 2.8640177 9.1591203 12.8385060 13.6538069 10.3953974 9.4402517 1.3420000 1.3420000 0.5781000 0.5781000 -0.0262910 0.6411500 -0.0225940 -0.0225940 -0.0157290 -0.0157290 -0.0157290 0.0000000 0.0023706 -0.0101840 -0.0101840 -0.0101840 -0.0150410 -0.0150410 -0.0111850 0.6597800 0.0135050 0.0089045 0.0089045 0.0089045 0.6188100 0.6755000 0.6304500 0.6967300 0.0249820 -0.0182120 -0.0052485 0.5781000 -0.0262910 -0.0279700 0.6411500 0.6411500 -0.0225940 -0.0225940 -0.0157290 0.6544200 0.6451600 -0.0157290 0.3007600 0.3007600 0.3007600 0.3007600 0.0023706 0.0023706 -0.0091370 -0.0101840 -0.0101840 -0.0101840 -0.0150410 -0.0150410 -0.0150410 -0.0177190 0.6597800 0.6597800 0.0135050 -0.6776600 0.0089045 0.0089045 -0.0037270 0.6188100 0.6304500 0.7385400 -0.0096681 -0.6553700 -0.6553700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.660 0.000 0.101 -0.655 0.000 0.000 0.000 0.000 0.619 0.619 0.000 1.337 0.697 0.697 0.000 -0.655 0.000 0.000 0.578 0.578 0.000 0.000 0.641 0.641 0.000 0.000 0.650 0.650 0.000 0.000 0.301 0.301 0.187 0.187 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.660 0.000 0.101 -0.655 0.000 0.000 0.000 0.000 0.619 0.619 0.000 1.337 0.697 0.697 0.000 -0.655 0.000 0.000 0.578 0.578 0.000 0.000 0.641 0.641 0.000 0.000 0.650 0.650 0.000 0.000 0.301 0.301 0.187 0.187 8.4537163 NA 5.7350293 10.3617628 11.2463555 7.1535014 12.2081950 8.5340721 9.0166796 2.7860108 12.0322262 11.6665238 2.7035437 5.1079431 3.0755155 8.5139340 3.8255414 9.5825938 11.1656324 10.7002324 9.4903014 7.7427931 7.1278406 9.9503617 6.1552473 8.4615785 NA NA 10.8040590 7.7402098 6.6713712 8.4410473 6.2814238 10.1633782 10.6115023 4.6821800 8.7114853 NA 7.5289776 12.4593225 7.7658357 7.2635471 0.6160753 4.6160871 8.2122780 1.2010692 3.6160871 NA 3.7035548 5.8366109 1.7860108 9.6210110 -0.3838305 8.0631718 10.5297258 9.8182123 4.5702868 9.3651197 11.4058258 9.5541976 3.0083972 2.9380223 11.8708218 1.2010692 -1.3838305 -1.3838305 3.0083972 12.514406 6.259945 8.133758 13.037167 9.986231 11.251353 12.795997 12.430771 9.034995 10.556035 13.276586 9.364281 8.770907 9.610442 -1.383831 6.735029 11.626966 11.0605857 12.4662752 6.3095746 13.8307103 8.8267598 4.7658370 8.9255648 7.9559381 10.3854387 5.9470045 5.4615777 11.1049327 6.5933687 2.7860108 11.3397493 3.9736388 6.4317282 10.1144390 10.5571360 11.0703877 7.5644559 8.4234433 12.4427362 4.1706782 11.0932598 10.1312955 10.6374154 9.9464450 10.6932379 9.5199702 10.3191268 10.8018930 9.3406023 NA 9.3508572 8.2396954 12.2137918 4.2010535 9.8758317 6.9244277 9.7386576 10.3579766 7.4709565 14.1412421 10.1445425 10.8025122 12.4327721 10.4760114 -0.3838305 -0.3838305 10.4779507 10.8518035 9.7569182 TCGA-A7-A0DC 63 0 NA 906 breast stage ia t1c n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 NA 2 2 NA NA 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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-0.0085766 0.7294300 -0.9351900 -0.8637000 -0.8637000 0.2157600 0.2157600 0.2157600 -0.7890800 0.0104240 0.0104240 -0.2801300 -0.8733800 0.1790500 0.1790500 0.0083351 0.1305100 0.1392400 1.0026000 0.2103900 0.1431000 0.1431000 0.000 0.000 0.188 -0.854 0.216 0.216 -0.789 0.000 -0.280 1.514 0.641 0.179 0.179 0.000 0.000 0.131 0.131 -0.300 -0.300 1.003 2.112 0.210 0.143 -0.205 -0.205 0.000 0.000 0.000 0.000 0.233 0.233 0.237 0.237 -0.288 -0.288 1.310 2.176 -0.273 -0.273 0.000 0.000 0.000 0.000 0.188 -0.854 0.216 0.216 -0.789 0.000 -0.280 1.514 0.641 0.179 0.179 0.000 0.000 0.131 0.131 -0.300 -0.300 1.003 2.112 0.210 0.143 -0.205 -0.205 0.000 0.000 0.000 0.000 0.233 0.233 0.237 0.237 -0.288 -0.288 1.310 2.176 -0.273 -0.273 0.000 0.000 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-A7-A13D 46 0 NA 965 breast stage iia t2 n0 (i-) m0 female 2010 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 3 4 4 5 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 2.150143e-06 6.242351e-07 10.5882352941176 24.7058823529412 8.23529411764706 40 16.4705882352941 9.3094945 9.1442952 11.4633206 9.4890341 8.7488027 8.3002285 9.9333361 9.5989171 11.9265774 13.2785705 9.6932542 10.1669021 0.2852246 13.3656517 2.2852838 10.9197868 5.6661004 8.8889046 9.8645941 7.4849509 1.0222613 10.1422225 9.8513323 9.3585273 10.1102370 4.8702414 1.5076678 7.1181687 11.1294609 2.5076678 9.3806753 9.4350253 -1.2997379 4.3441752 9.0401659 10.3214518 9.1689398 9.4742791 8.8538678 11.2128093 -0.2997379 9.0786106 15.7297647 8.3074609 9.8270201 10.8169846 10.5951335 3.2852838 1.0222613 8.9799264 10.1070523 1.0222613 9.8107991 5.0040968 3.7447101 5.3296726 9.5180988 11.9036637 9.5324146 12.0315126 12.9259751 7.7528837 10.5383378 10.0977872 11.0443342 10.5359715 5.2852764 11.6277234 9.5752970 NA 11.0029546 9.3656516 3.4013164 3.7447101 8.7864520 10.1976686 10.8586099 9.6939619 3.3441752 6.8702402 13.1036607 12.8014707 10.1365067 10.0340301 1.621800 1.409800 -0.173480 0.501340 -0.199500 1.581600 0.408780 -0.195420 -0.585300 -0.146050 2.619700 1.292300 -0.228100 -0.228590 -0.233490 -0.187350 0.243890 -0.200870 0.221450 -0.152080 -0.247460 -0.134840 1.222500 -0.193160 -0.353050 1.507200 0.747270 0.668080 0.067375 0.374130 -0.077745 -0.167900 -0.339980 0.222530 -0.472680 -0.364880 0.408780 -0.158600 -0.210570 0.692040 0.716970 -0.661600 -0.172360 -0.155790 -0.182440 -0.212180 0.438510 0.246380 -0.213550 -0.226250 -0.185210 -0.221580 0.243890 -0.203610 -0.233980 -0.160640 -0.164720 -0.400970 -0.195250 -0.199250 -0.165740 -0.168280 -0.183950 0.388330 0.827250 0.683100 0.630070 -0.160770 0.026233 0.957 -0.270 -0.185 -0.185 -0.037 -0.188 -0.165 -0.152 -0.200 -0.199 -0.199 -0.187 -0.187 0.086 -0.158 -0.353 0.772 0.247 0.247 0.710 0.710 0.618 -0.139 0.478 0.478 -0.177 0.525 -0.210 -0.210 0.377 -0.370 -0.182 -0.182 0.744 0.744 -0.601 0.711 -0.167 -0.167 0.102 0.102 0.957 -0.270 -0.185 -0.185 -0.037 -0.188 -0.165 -0.152 -0.200 -0.199 -0.199 -0.187 -0.187 0.086 -0.158 -0.353 0.772 0.247 0.247 0.710 0.710 0.618 -0.139 0.478 0.478 -0.177 0.525 -0.210 -0.210 0.377 -0.370 -0.182 -0.182 0.744 0.744 -0.601 0.711 -0.167 -0.167 0.102 0.102 8.3369403 NA 7.9857179 10.3775949 12.1278905 5.9905193 12.0926332 9.5483675 8.7797604 NA 15.3132562 12.2302818 3.7003176 NA 3.0926303 8.9891819 2.0222613 9.2786885 11.1336404 11.3791359 8.6675420 1.0222613 8.8526007 9.5936173 6.2238781 7.9903343 3.9857190 NA 10.0742685 0.2852246 5.8088406 8.6176878 5.3002299 9.8462161 10.8570309 NA 10.4226964 6.0490448 8.4501852 13.0400962 7.5140970 10.3527126 -1.2997379 2.8702463 6.8398677 4.1265765 3.8295959 -1.2997379 NA 2.2924873 3.6072119 11.3953265 8.7930730 11.9366290 10.0199879 9.7038337 5.5706815 9.7309829 12.5629531 8.7323615 1.7003065 4.1265765 9.9291344 5.1432587 4.5332082 NA 6.1432587 11.255830 9.801635 7.455203 13.365652 9.628094 11.086987 7.484951 10.376714 8.572221 10.691838 13.232611 11.705589 8.979926 8.816660 1.022261 7.689001 11.376714 10.9212986 12.2514231 5.2701701 14.2792182 8.7717780 4.1597503 8.6369537 8.4816755 9.7162604 3.4552023 7.7254556 9.6932542 10.5614026 -0.2997379 9.8127552 7.9949366 8.4920158 13.1582096 10.3894401 10.0154654 6.6855884 9.4367176 8.6530572 2.9482457 10.7830403 9.1689398 9.5882979 9.0435014 11.5218904 11.5004067 10.9285332 10.3364871 8.8244369 NA 8.9625516 6.4076757 10.1070523 2.7877877 9.8107991 7.5332059 10.1556430 9.5180988 7.7087446 13.7689261 10.3731830 9.6861577 14.2839274 11.0963853 NA -1.2997379 10.6786687 9.4179921 9.0677304 TCGA-A7-A13E 62 1 614 NA breast stage iib t2 n1 mx female 2010 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 3 3 4 4 1 1 5 5 2 7 5 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.28315e-06 5.548757e-07 35.8490566037736 13.2075471698113 7.54716981132075 26.4150943396226 16.9811320754717 10.7163928 9.5045803 11.9284960 10.3559658 8.7610977 7.9246979 10.3569057 10.2359373 11.2764871 12.1679471 11.3774294 10.3178602 2.7724136 13.0550670 1.0943712 9.0875626 5.9016948 8.4745857 9.1818040 1.3573831 NA 4.7496952 11.6815560 9.6841271 10.9126036 2.6793112 -1.2276920 8.0807520 9.9769841 1.5797594 9.4606633 5.5668273 NA 3.2318471 8.6210357 10.8835486 9.3018435 9.4297314 9.4658998 11.8565570 3.2959728 9.6603951 14.2420230 7.3909454 9.4780454 11.8442105 10.9677851 3.7266133 -0.2275231 9.6108290 11.0988424 0.7723924 10.7149275 4.5797655 5.8704461 5.9818663 10.1211411 11.4630657 9.8525643 11.4379709 12.3365624 7.9964147 11.8732395 11.6244430 10.5517219 11.2640155 3.9818618 11.5185073 5.8058367 4.9423362 9.5749293 9.6838049 2.9503378 5.0203422 10.7853866 10.3246017 10.7327769 9.8997625 3.3573690 9.3935490 13.4024525 10.9297599 9.4457219 9.3270017 0.90070000 0.90070000 0.01505100 -0.00387790 -0.00498440 0.41212000 0.02906500 0.03016900 0.82236000 0.82236000 0.88686000 2.33880000 -0.48439000 -0.48963000 -0.48963000 2.93690000 0.83962000 -0.48554000 -0.00221680 -0.49638000 -0.49819000 0.00000000 0.00000000 0.00000000 0.41999000 0.41028000 -0.50795000 0.44088000 0.03679400 -0.47628000 -0.48502000 0.00221930 -0.53069000 -0.01340200 -0.50546000 -0.50546000 0.02906500 0.03016900 0.03016900 0.46443000 0.49338000 -1.07300000 0.78987000 0.78987000 -0.02219500 1.85010000 -0.48439000 -0.48439000 -0.48963000 -0.48963000 -0.49621000 -0.49621000 0.83962000 -1.29290000 -0.49361000 -0.47955000 -0.48722000 -0.50133000 -0.49819000 0.00027728 -0.01047000 0.00000000 0.86553000 -0.49454000 -0.49099000 0.41949000 0.44534000 -0.50950000 -0.50979000 1.631 1.147 -0.496 -0.496 0.840 -0.459 0.000 -0.496 -0.498 0.000 0.000 0.000 0.000 0.857 0.857 -0.081 -0.491 0.000 0.882 0.441 0.441 0.366 -0.501 0.173 -0.485 0.000 0.000 -0.512 0.000 -0.093 -0.505 0.000 0.000 0.450 0.450 -1.004 -0.170 0.790 0.790 0.000 0.000 1.631 1.147 -0.496 -0.496 0.840 -0.459 0.000 -0.496 -0.498 0.000 0.000 0.000 0.000 0.857 0.857 -0.081 -0.491 0.000 0.882 0.441 0.441 0.366 -0.501 0.173 -0.485 0.000 0.000 -0.512 0.000 -0.093 -0.505 0.000 0.000 0.450 0.450 -1.004 -0.170 0.790 0.790 0.000 0.000 6.8438758 NA 4.8598752 10.3545549 11.6206446 7.0928523 11.8992787 7.5763823 6.9291531 NA 13.1687501 12.2345394 3.1647380 -1.2276920 4.5273018 9.4117537 3.8598801 8.9485860 10.7685333 10.8809374 9.7068410 -1.2276920 7.6241623 9.6218180 5.4728516 5.9119648 -0.2275231 NA 10.6135841 -0.2275231 6.0852950 8.4814967 10.9867320 10.1403082 11.5054283 -1.2276920 8.7933929 -1.2276920 8.0875626 12.7021337 9.4789089 8.4090374 NA 3.2959728 8.5957800 NA 3.9016972 NA 2.0943374 1.7723924 6.7667661 11.1902655 3.7724136 8.2049550 11.0406625 9.7589660 2.2318317 9.0215264 11.9756080 6.9867318 1.9423456 1.7723924 11.2974443 2.4728516 8.0830256 4.6793056 7.6396916 13.759527 7.020340 8.790613 13.055067 10.258987 11.351021 1.357383 11.092085 10.706491 11.708867 13.301538 12.632918 9.610829 7.822262 3.772414 8.443069 11.191320 10.7291521 10.9460901 6.1299650 14.1182676 8.0485376 3.6792999 8.9572884 8.8651700 11.3006399 4.2959728 4.5003304 11.3774294 5.5668273 -0.2275231 10.6167264 10.1855119 8.8162605 13.8711853 9.0566586 10.4266014 7.6365992 8.1711568 8.3797431 4.2318471 10.8973226 9.3018435 9.9246978 9.5364551 12.5486403 13.8648810 10.4589135 10.5011837 9.1507077 NA 9.2554325 7.5501288 11.0988424 4.9016972 10.7149275 6.5989621 12.2504393 10.1211411 7.4763169 13.4304570 10.5214443 9.6979673 12.0824576 11.0069310 -0.2275231 NA 10.0036341 9.9183451 9.6005495 TCGA-A7-A13F 44 0 NA 765 breast stage iiia t3 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 1 1 1 2 2 2 1 1 1 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 1.040392e-07 32.1428571428571 14.2857142857143 0 28.5714285714286 25 9.6957804 9.6344101 11.2232555 8.7646719 8.8525264 8.4337235 9.2499082 10.0414063 10.5805651 14.7712135 7.7145217 10.8262805 1.0057593 13.4663918 2.7713151 7.7364222 5.5907457 7.6639935 9.4395764 12.5625758 1.0057593 13.6378688 3.0761657 9.9500551 10.5948716 7.3877580 0.2687937 8.8956816 9.0057823 1.2687937 7.6838543 7.2874806 NA 4.8933088 9.9311884 10.0990678 10.1636346 10.9186717 9.1027610 11.1777097 2.7713151 10.8981734 15.4996628 7.6491189 9.7479234 11.4723687 11.4705323 4.4117720 4.9317823 7.9198686 11.5393068 NA 10.8890366 5.0237034 5.0588922 5.0414051 9.9186717 11.5365788 10.3968111 11.9210642 12.6299381 8.9830623 10.8198841 10.0783170 11.6349568 10.4307884 4.9506410 11.2962620 11.6269185 -0.3161688 10.2398812 9.2201014 2.1432955 5.1595888 10.9576498 9.5664972 10.2336390 9.8926982 0.6838312 9.6696961 13.5495392 12.2470505 10.1580672 9.0825980 0.896060 1.002600 0.205190 0.226630 -0.158600 0.230550 0.206410 -0.611150 0.619740 0.619740 0.629160 -0.235170 -0.202740 -0.190990 -0.215770 -0.215770 0.165200 0.209930 -0.613350 -0.576670 0.578980 0.529410 0.529410 0.529410 0.097252 0.097252 0.097252 3.656900 -0.724560 0.218990 -0.182830 0.205190 -0.259980 -0.158600 0.230550 0.230550 0.206410 -0.611150 -0.653990 0.220060 0.207570 0.611720 -0.205850 -0.205850 -0.205850 -0.238150 -0.202740 -0.236060 -0.227660 -0.215770 -0.215770 -0.215770 0.209930 0.209930 0.209930 -0.613350 -0.654770 -0.667530 0.592780 -0.249950 -0.285130 0.529410 -0.213790 0.097252 0.097252 -0.250790 0.202740 0.156230 0.149050 -0.205 -0.205 -0.216 -0.216 0.210 0.210 -0.613 -0.647 0.593 -0.244 -0.244 -0.285 0.244 -0.192 -0.192 0.000 0.000 0.994 0.994 0.236 0.487 0.203 0.156 -0.199 -0.199 0.227 0.227 -0.194 -0.194 0.231 0.231 0.206 -0.390 0.208 0.208 0.620 0.620 -0.238 -0.238 0.000 0.000 -0.205 -0.205 -0.216 -0.216 0.210 0.210 -0.613 -0.647 0.593 -0.244 -0.244 -0.285 0.244 -0.192 -0.192 0.000 0.000 0.994 0.994 0.236 0.487 0.203 0.156 -0.199 -0.199 0.227 0.227 -0.194 -0.194 0.231 0.231 0.206 -0.390 0.208 0.208 0.620 0.620 -0.238 -0.238 0.000 0.000 8.7936849 NA 6.6725385 10.0815288 11.5414465 6.8504694 10.0873989 8.7589724 8.4610275 NA 11.2037362 13.9948142 3.1432791 -1.3161688 2.3842985 7.9944672 3.7713151 8.8182805 11.3013217 10.6042071 9.3222901 -0.3161688 7.8487613 9.5779141 6.6380507 5.4117754 0.2687937 NA 10.5929973 3.6838536 5.6027182 9.0953654 6.9876347 9.7765255 10.2735054 4.9692564 9.5480404 7.1143066 7.4286885 12.9565569 6.9921929 7.2612835 NA 0.2687937 9.0815290 2.1432955 4.1757082 NA 2.0057952 6.3869265 1.2687937 10.8609623 0.2687937 7.7713171 10.4109238 10.1262795 4.3277089 9.8310592 11.0542692 8.3132109 1.6838761 3.5418369 12.1543860 2.3842985 NA 1.4911861 2.4912118 12.0914925 7.1595878 8.7526325 13.4663918 9.2846964 11.2000467 12.5625758 12.0557670 9.1876799 10.6725389 12.6307605 10.9570671 7.9198686 7.0588933 0.2687937 7.6056951 13.2732128 10.6431318 11.0769766 6.6263690 14.2143209 8.5771557 3.6838536 7.7391366 10.5344318 9.5876532 5.4253217 7.5907450 7.7145217 5.7818869 2.4912118 9.6597022 4.9506410 8.3749521 10.5187203 8.0588939 9.9453616 7.4815161 8.3527391 12.5937473 3.2074087 10.0383736 10.1636346 9.3411728 10.0203608 9.7296139 9.6234334 9.9078560 10.8893420 9.1247233 NA 9.1760579 6.2069460 11.5393068 3.8537761 10.8890366 5.5907457 9.8393051 9.9186717 7.0331135 13.5135770 9.6467502 10.1747051 12.7955605 10.8515860 NA 0.2687937 10.4944259 9.7573263 8.8786110 TCGA-A7-A13G 79 0 NA 718 breast stage iia t2 n0 mx female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 5 NA NA 4 1 5 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.774378e-07 13.6363636363636 27.2727272727273 9.09090909090909 27.2727272727273 22.7272727272727 11.6094114 10.3016382 11.8994601 10.2942381 8.5489020 9.6334354 11.6586274 9.0263112 10.0296572 13.2047718 10.9935598 10.3524020 4.3154141 13.0339215 4.3727432 8.3251269 7.9977423 8.2696078 12.4978061 12.9947016 4.5653900 13.3794626 8.7040108 9.9650388 11.2130119 8.9028092 -0.8940538 7.0248216 9.0300284 1.2759010 7.9639393 6.2858682 NA 3.2352369 10.3416735 10.1513767 11.5858649 11.4168551 10.3774214 10.9897471 0.4279279 12.0700284 14.4300861 9.0019728 10.3428575 11.9886969 11.5391526 4.0366967 7.1448774 8.7443942 12.3302616 -1.8937857 10.9828589 2.5653778 4.6295198 4.2758861 10.4480331 11.9689830 10.5902778 11.5478651 13.2001598 8.0068254 10.6045582 10.5489070 11.5437104 11.2761964 5.5068368 11.6169697 10.4040209 -0.8940538 10.1496693 8.9809398 4.0606181 3.8608436 10.3701077 10.2774479 10.1841092 9.9072625 1.9133011 5.3347756 12.0562409 10.6866880 10.2920725 9.5912845 1.72750000 1.75240000 0.00277450 -0.00346270 0.00430210 -0.00055444 -0.00235530 -0.00235530 -0.00415460 -0.00415460 -0.00415460 0.00000000 0.00000000 0.00346870 0.00346870 0.00346870 -0.00138580 -0.00138580 0.00444110 0.00249690 -0.00180140 -0.00526100 -0.00526100 -0.00526100 -0.00221680 -0.00221680 -0.00221680 0.00319100 -0.00290910 -0.00733390 0.00277450 0.00277450 0.00430210 0.00259930 -0.00055444 -0.00055444 -0.00235530 -0.00235530 -0.00235530 -0.93585000 -0.91883000 0.01544700 -0.00290910 -0.00290910 -0.00290910 -0.00290910 0.00000000 0.02146300 0.00346870 0.00346870 0.00346870 0.00346870 -0.00138580 -0.00138580 -0.00138580 0.00444110 0.00249690 0.00249690 -0.00180140 -0.90510000 -0.00526100 -0.00526100 0.00763920 -0.00221680 -0.00221680 0.00319100 0.01265500 0.00791750 0.00791750 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.924 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.691 0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.924 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.691 0.772 0.000 0.000 0.000 0.000 0.000 0.000 8.7827971 NA 5.9701450 10.4393932 11.3025604 7.1918025 12.7758399 7.8283218 9.1101787 0.4279279 10.9145204 10.6183161 3.1503485 4.0601512 3.6295198 8.6117699 2.7498131 10.1143869 11.7455252 12.0338289 9.2746304 9.5431902 7.5674374 10.1400695 5.1934209 5.4809986 -0.3090019 -1.8937857 11.5021618 6.7994448 4.8741428 8.4613096 5.7206670 10.7481815 10.7416765 3.1934248 7.9623836 NA 7.4502545 13.2729060 9.7197478 6.6097845 -1.8937857 1.2759010 8.8355790 4.4458061 3.4982764 0.1059462 0.1059462 7.5079254 1.1059462 10.0832382 -1.8937857 6.4896633 10.3925161 9.7197478 1.9133011 10.3383793 11.5517492 6.0307709 2.3538878 2.2758712 11.9214417 3.7498131 NA 2.4982764 1.9133011 13.6924569 3.9886029 8.5551071 13.0339215 10.6405044 11.2791670 12.9947016 13.4755557 9.5524524 10.8176253 13.2443901 7.5633389 8.7443942 8.8055308 0.1059462 7.5025629 11.5305183 11.032810 12.650621 8.117185 14.041582 9.131098 2.565378 8.938057 8.752517 10.030444 5.847426 8.020343 10.993560 5.295782 8.526971 11.555494 3.463505 5.912734 9.700283 10.304710 11.483169 8.552948 8.416571 13.488245 2.913320 12.895467 11.585865 10.274004 10.004938 12.183191 8.902809 10.135936 10.712132 9.571525 -1.893786 9.617632 7.319719 12.330262 2.193425 10.982859 6.325127 10.847590 10.448033 8.344470 13.926709 10.563852 10.500421 13.039280 9.594803 NA -1.893786 10.663901 11.281820 10.532747 TCGA-A7-A13H 61 0 NA 899 breast stage iib t2 n1a mx female 2010 NA no infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 3 5 NA NA 3 3 4 3 6 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 6.935946e-08 18.75 6.25 6.25 25 43.75 10.0524446 9.2246727 12.1043057 9.2271810 8.4316815 9.1205870 11.1203622 9.3458035 10.5402269 10.0272378 11.8390410 10.3338277 1.2804813 13.5809996 2.5605927 10.2095306 6.6279468 8.5405632 10.1451119 12.8344556 3.0580913 13.8038705 8.0315496 9.3321120 10.5773997 6.6126798 NA 13.0413859 8.8129785 0.7950188 8.8295807 7.1097534 -1.5269924 4.9488625 9.8018036 9.9376744 9.1543670 11.2551030 10.1539277 11.1585345 -1.5269924 11.7421092 14.5330223 8.2052791 10.2107986 10.6069131 10.8182566 4.7769094 6.2869107 8.5894725 11.0806902 NA 9.4171086 6.3800194 6.9609692 5.4156438 9.9009652 11.8099141 10.8138133 12.2609292 12.6996161 8.9559367 10.6174683 10.7152012 11.1526088 11.3471495 5.2145950 11.8659827 11.7106374 -1.5269924 10.4892405 8.7387439 4.4843573 5.7492527 10.5270545 10.3056231 10.3971989 9.4850546 5.0878404 10.2820928 13.4875415 12.7973092 10.2988825 10.5099891 0.83962000 0.84041000 0.42385000 -0.00705760 -0.00069303 -0.00387790 -0.00290910 -0.00290910 0.00763920 0.00763920 0.00763920 0.00374650 0.00083195 0.01377200 0.01377200 -0.44405000 -0.01050800 -0.01050800 -0.00138580 0.00680440 0.00847430 0.46553000 0.01430300 0.01430300 0.01880300 0.01880300 0.01880300 0.03369000 0.00917050 -0.00152430 0.00430210 0.01656500 -0.00069303 -0.00954260 -0.00387790 -0.00387790 -0.00290910 -0.00290910 -0.00290910 -0.00512270 -0.00512270 0.01349200 0.00263570 0.00263570 0.00263570 0.00263570 -0.87984000 0.01126100 0.01377200 0.01377200 -0.44405000 -0.44405000 -0.01050800 -0.01050800 -0.43637000 -0.00138580 0.00680440 0.00680440 -0.44307000 -0.42963000 -0.44029000 0.01430300 0.01826400 0.03031000 0.01880300 0.02035300 -0.03095000 -0.41630000 -0.41630000 0.000 0.000 0.000 -0.444 0.000 0.000 0.000 0.000 0.000 0.030 -0.431 -0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.416 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.444 0.000 0.000 0.000 0.000 0.000 0.030 -0.431 -0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.416 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.43313055 NA 6.80404581 11.70209760 11.21269834 7.76639308 12.40321914 9.03225709 9.24993189 3.38002289 11.93448020 11.59567843 3.38002289 2.79506039 3.75852705 7.53382495 4.42732458 10.68623289 11.55228008 11.06815297 9.09609552 6.74459169 7.97695414 10.62921171 7.92433984 5.70194821 0.47311150 -1.52699243 10.84245336 6.92021230 7.33731505 7.73287223 8.25776355 11.31552027 10.65583336 5.18737583 9.33499099 0.47311150 8.20953037 12.14974693 8.74808917 8.18737434 -0.52678457 2.05807401 7.76084101 -0.52678457 4.88252078 -1.52699243 6.17356921 5.30601793 4.49549691 10.22425424 1.64307115 9.14466971 10.64961348 9.37021769 5.72105543 9.75621704 12.61419800 9.26429152 4.42732458 4.14555519 11.97583618 0.05810865 -1.52699243 0.47311150 2.05807401 13.220567 5.027716 8.621605 13.581000 10.482607 10.399054 12.834456 12.666500 8.411238 10.531120 13.135129 10.676783 8.589473 9.004510 1.473112 7.283701 11.246680 11.4351209 12.1898410 6.3800194 13.2385650 8.9376745 7.6654212 8.4996522 7.5868706 10.9538356 7.9305097 7.0915137 11.8390410 7.0391823 0.7950188 10.8718724 8.2724105 6.8238907 10.6511710 10.8006813 10.4607480 7.9927650 9.0238755 11.6141182 7.0277180 11.2099513 9.1543670 10.5718188 10.2458556 11.2491504 10.2929086 10.1111119 10.6798378 8.0142253 NA 9.4324352 6.3426916 11.0806902 7.4532682 9.4171086 5.4156438 11.2380334 9.9009652 7.2869735 13.5120905 10.0069451 10.0557411 12.6063512 11.4253239 1.7950604 -0.5267846 10.1843655 10.0841534 10.0453552 TCGA-A7-A26E 71 0 NA 954 breast stage iiia t3 n1a mx female 2010 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 1 5 3 3 4 4 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 3.121176e-07 27.2727272727273 39.3939393939394 3.03030303030303 21.2121212121212 9.09090909090909 10.827419 10.810458 12.244878 10.729764 8.137793 9.605237 10.851456 9.740772 8.778328 12.524596 10.695763 10.815780 1.086580 13.001950 4.730439 9.080230 5.932073 8.783552 9.724567 13.490228 NA 13.481616 8.055251 9.060998 11.401309 8.721395 NA 7.782874 8.665900 3.730444 8.340431 8.073848 -1.913216 4.981401 10.758567 11.283032 11.197720 13.293522 11.376891 12.644466 1.787014 12.241323 13.909055 9.203058 9.838960 11.899563 12.013251 5.708637 5.602285 9.694839 13.172015 -1.913216 11.694492 4.814504 6.158046 4.086580 11.067616 11.974281 10.655015 12.541654 13.586679 8.347504 11.375306 11.299712 12.076599 11.827313 5.656439 12.662360 10.821294 NA 10.365033 9.034951 3.646070 5.780071 10.542682 10.626227 9.607694 10.408512 3.334511 9.896754 13.626742 11.722642 10.789190 9.342203 4.7959e-01 4.3794e-01 0.0000e+00 0.0000e+00 -3.0617e-02 6.9435e-03 3.7465e-03 -2.1663e-02 6.9435e-03 6.9435e-03 6.9435e-03 -2.8453e-01 -2.8453e-01 -6.8515e-01 -6.8515e-01 -6.8515e-01 2.2865e-02 2.2865e-02 -1.4451e-01 -1.1123e-01 -2.6059e-01 -2.3018e-01 -2.3018e-01 -2.3018e-01 9.8270e-02 9.8270e-02 9.8270e-02 -2.1020e-01 -2.7117e-01 -2.7117e-01 8.7033e-05 0.0000e+00 7.7574e-02 -3.0617e-02 6.9435e-03 6.9435e-03 3.7465e-03 3.7465e-03 3.9054e-02 4.4999e-02 1.0495e-02 6.9435e-03 4.6984e-02 4.6984e-02 4.6984e-02 4.6984e-02 -2.8453e-01 -2.8453e-01 -6.8515e-01 -6.8515e-01 -6.8515e-01 -6.8515e-01 2.2865e-02 2.2865e-02 2.2865e-02 -1.4451e-01 -1.1123e-01 -1.1123e-01 -2.6059e-01 -6.6346e-01 -2.3018e-01 -2.3018e-01 -1.2966e-01 9.8270e-02 9.8270e-02 -2.3770e-01 -1.1600e-01 -6.2513e-01 -6.2513e-01 -0.285 -0.285 -0.685 -0.685 0.000 0.000 -0.145 -0.111 -0.261 0.124 -0.539 -0.230 -0.230 -0.130 -0.130 0.000 0.000 0.167 0.438 -0.238 -0.238 -0.116 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.285 -0.285 -0.685 -0.685 0.000 0.000 -0.145 -0.111 -0.261 0.124 -0.539 -0.230 -0.230 -0.130 -0.130 0.000 0.000 0.167 0.438 -0.238 -0.238 -0.116 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1131077 2.3345111 5.3057517 9.6985309 10.9305050 6.2732436 11.5549535 8.5827186 8.2789753 0.6715651 12.2401360 10.6438419 2.2564974 4.9934751 3.8679459 9.0342209 3.6715425 9.7567976 10.9059648 10.8487584 9.2003261 4.7870249 7.9051661 9.4073846 5.6334777 11.8540443 NA NA 10.9655928 8.8489659 7.2714593 7.5983369 5.2565088 10.3288650 10.7842032 3.7590067 7.6994524 NA 8.8588986 12.3636534 8.8850557 6.3533709 -0.3284349 1.4084945 8.3696724 -0.9134880 3.2158649 -1.9132162 3.8939349 6.2813904 3.3719909 9.8110978 NA 8.4275467 10.4556360 9.7861564 4.7447962 9.3679345 12.3015101 8.7483619 1.6715651 2.2564974 12.5565437 0.6715651 NA -1.9132162 -1.9132162 12.0909853 4.9569488 8.6402131 13.0019499 10.5605433 10.5769334 13.4902285 13.0471290 8.8899079 11.5497251 13.5238809 9.1905275 9.6948388 9.1493048 0.4084945 7.2590116 11.9545383 11.13694281 11.58393685 8.08799209 13.83477630 9.28870784 5.43531189 8.87040079 8.69945238 11.00127743 6.33451107 7.51074993 10.69576272 6.46596304 4.49597651 12.29184267 7.12824287 6.73357398 11.24708574 10.98933588 10.94164709 8.56434234 6.99046594 13.62495480 4.73043889 12.07618692 11.19771964 10.43365158 8.89635208 12.30915248 9.23251614 10.54678384 10.96922699 9.51912591 -0.32843487 8.45088296 9.36613662 13.17201493 3.91947357 11.69449218 7.46596222 10.18296970 11.06761600 7.34867859 13.54806342 9.78398598 10.14389884 13.18231064 9.91154269 -0.32843487 0.08664791 11.03312480 11.37415209 10.09045320 TCGA-A7-A26F 55 0 NA 738 breast stage ia t1 n0 m0 female 2010 NA yes other, specify 0 white not hispanic or latino NA NA 3 4 1 1 2 5 2 7 NA NA 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 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5.7839385 10.9455119 10.3601096 11.7417564 11.1173744 5.3916200 11.9840779 8.6515781 -0.4827747 10.6763923 9.7654746 2.6945459 6.2359702 11.3386600 10.8437685 9.8484419 10.2385357 2.5171497 8.3875163 13.3117030 12.6635082 9.6160610 10.2957765 0.229640 0.092878 0.132300 -0.240690 -0.096820 0.026952 -0.031888 -0.031888 0.187460 0.427400 0.427400 1.326500 0.021186 0.273340 0.273340 0.273340 -0.074128 -0.074128 0.342760 -0.045077 -0.254660 -0.262540 -0.262540 -0.252480 -0.011732 -0.011732 -0.011732 0.024565 -0.292820 0.229640 -0.291050 -0.258640 -0.096820 -0.096820 0.026952 0.026952 -0.031888 -0.031888 -0.031888 0.492700 0.492700 0.187460 -0.068914 -0.068914 -0.068914 -0.068914 0.021186 0.096543 -0.304380 0.273340 0.273340 0.273340 -0.074128 -0.444250 -0.104460 0.342760 -0.045077 -0.201110 0.015744 -0.028885 -0.262540 -0.262540 -0.300380 -0.011732 -0.011732 -0.153960 -0.075862 -0.010491 -0.010491 0.000 0.000 0.273 0.273 0.000 0.000 0.343 0.000 -0.255 0.000 0.000 -0.263 -0.263 -0.300 -0.300 0.000 0.000 0.230 0.230 0.000 0.000 0.000 0.000 0.000 0.000 -0.241 -0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.493 0.187 0.427 0.000 0.000 0.000 0.000 0.000 0.000 0.273 0.273 0.000 0.000 0.343 0.000 -0.255 0.000 0.000 -0.263 -0.263 -0.300 -0.300 0.000 0.000 0.230 0.230 0.000 0.000 0.000 0.000 0.000 0.000 -0.241 -0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.493 0.187 0.427 0.000 0.000 0.000 0.000 7.6395484 2.1021206 4.7650785 9.3621189 11.0216397 5.6664925 10.5183253 9.7687603 7.0762352 0.5171245 12.9517799 11.3934525 5.6803834 NA 4.5615461 9.2698112 3.9765836 10.5402130 12.0231286 10.5728861 8.5274465 3.0614652 8.4038646 9.5764963 6.8688275 8.2473389 7.1416423 -2.0679388 11.1442296 3.8863843 7.9861151 8.5514922 9.3704612 8.0967821 10.2027766 3.1801160 8.3061419 2.8390727 9.4013222 12.1122537 7.9037331 9.9982784 1.2541102 1.3916028 7.6584072 -2.0679388 2.6326405 NA 5.4713468 4.5842470 2.9765836 10.8947238 -2.0679388 10.5990790 10.4515798 9.8525421 5.8209320 10.2393900 13.7123188 8.8892913 3.2175875 3.7901673 9.8155962 2.2541102 NA 2.1021206 3.0196485 11.764673 8.134313 8.843581 11.936410 10.322713 10.340254 11.264226 9.695402 9.737933 11.380047 13.538826 10.463327 9.319129 7.944814 2.739546 7.294133 11.270508 11.52919422 11.44764268 6.55789865 14.45265244 9.69954608 8.77611024 8.82927844 9.25918043 10.11509868 7.59930068 5.59752522 10.00900474 7.85551698 1.25411024 11.43886871 5.11209958 8.39677601 13.44637930 10.32182057 10.85049348 8.11830366 7.55607069 11.08177761 8.12817635 11.37004012 9.93148466 9.70615253 9.47715375 11.79502027 9.68205863 9.53210204 10.76072244 10.16010588 9.38030542 10.36002325 8.81306608 14.51958585 8.64471614 10.99861483 8.58771977 10.35293901 11.63738958 7.97521631 13.87133107 9.87397049 10.55926704 12.93148460 10.41801850 3.01964855 -0.06778761 11.34025353 10.86772260 10.07493446 TCGA-A7-A26G 50 0 NA 722 breast stage iia t2 n0 (i+) m0 female 2010 NA no other, specify 0 black or african american not hispanic or latino NA NA 4 4 6 1 5 5 4 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.040392e-06 5.201959e-07 10.6382978723404 29.7872340425532 2.12765957446809 36.1702127659575 21.2765957446809 10.6569336 10.4491459 11.5515231 10.0692774 8.5373730 9.4037979 8.9766581 10.8548290 10.2318304 12.0633828 9.9320680 10.8119671 0.1311944 10.0007619 3.6547334 9.4898193 4.6703248 8.7614352 10.3560741 9.7987232 NA 9.9600980 2.3010901 8.3450499 11.1129137 5.2186301 0.4531224 11.6369437 9.8324745 2.7750295 7.6290200 10.1027117 -1.8688056 6.5574331 10.3488229 10.4821072 9.3773149 10.2419776 10.2639891 11.4161367 2.7161349 7.3979544 14.8701443 8.5666611 8.7875928 11.1747081 10.9461510 4.6230240 NA 10.1938889 12.1053137 NA 11.2813913 6.2396921 7.9026573 5.2910399 11.1861115 11.6918591 9.3950240 12.7494962 13.4287292 7.1999461 11.2807564 10.8804677 11.4717136 11.5018555 5.7161294 12.5484932 9.5304459 4.4887207 10.0061495 10.2941887 2.5269202 6.4165695 11.1813568 10.7918325 10.8307405 10.9650464 2.8860623 7.7587023 12.8732669 12.4796888 10.1287004 9.8522673 0.0207630 0.2334900 -0.0040162 0.2616900 -0.2060200 0.0818990 0.0868480 0.0300290 -0.3092100 -0.3092100 0.4648500 0.7372000 0.1625000 0.3512000 0.3690400 0.3690400 -0.0604430 -0.0604430 -0.0553640 -0.3047500 -0.1850900 -0.1748700 -0.1748700 -0.1748700 0.0622230 0.0622230 0.0622230 0.1992300 -0.0499780 0.0207630 0.0278490 0.0451620 -0.2060200 -0.2599800 -0.2930700 -0.3026300 0.3001100 0.0300290 -0.0203920 0.0556580 -0.3226300 -0.3388300 -0.2633600 -0.3033400 0.4439200 0.0000000 -0.2961500 0.1992300 0.3590400 0.3690400 0.3013800 0.2766300 -0.0604430 -0.0507760 -0.0507760 -0.1182200 -0.3047500 -0.3047500 0.3729800 -0.0011087 -0.1748700 -0.1748700 0.0076392 -0.3264600 0.0622230 0.2021300 -0.1246000 -0.0096806 -0.0096806 0.144 0.144 0.359 0.359 0.000 0.000 -0.118 -0.305 0.188 0.000 0.000 -0.175 -0.175 0.000 0.000 0.000 0.000 0.000 0.208 0.202 0.202 -0.125 0.000 0.000 0.000 0.000 0.000 -0.206 -0.206 0.000 -0.303 0.000 0.000 0.000 0.000 0.156 0.465 -0.300 -0.300 0.000 0.000 0.144 0.144 0.359 0.359 0.000 0.000 -0.118 -0.305 0.188 0.000 0.000 -0.175 -0.175 0.000 0.000 0.000 0.000 0.000 0.208 0.202 0.202 -0.125 0.000 0.000 0.000 0.000 0.000 -0.206 -0.206 0.000 -0.303 0.000 0.000 0.000 0.000 0.156 0.465 -0.300 -0.300 0.000 0.000 6.8658780 -0.8688056 5.2186301 9.0839093 11.3559234 5.2321465 9.1444908 9.9477318 7.4399397 1.5905781 11.7368791 12.6442590 2.3010901 NA 2.8316138 8.6857569 4.6857552 10.6883924 12.1751352 10.6705692 8.7170694 1.3011194 7.8298730 9.6159910 7.9497503 6.0736832 4.5906020 NA 11.8370164 3.3790941 6.9766581 9.1857724 4.8860575 8.5668384 10.4994017 5.5490191 7.7142510 1.8315935 8.9561269 13.1338952 7.6508040 6.8211655 NA 2.8860623 8.0882699 6.4072933 4.0138106 -0.8688056 7.0559808 3.3425690 4.7458773 10.6053810 1.1311944 11.0700125 10.6411904 10.2665568 5.4530961 9.9676130 13.1361346 9.7960597 5.6310140 4.5741136 10.6584007 2.8316138 4.5062084 0.4531224 5.6389629 12.2824225 7.3719596 8.8044773 10.0007619 10.2967786 10.5296446 9.7987232 11.2326514 9.0373070 11.3635890 13.4140031 10.7659791 10.1938889 7.5616209 -0.8688056 7.4096175 11.2076497 11.149020 10.718946 7.273275 15.052520 8.977442 8.520262 7.421187 8.401463 10.055494 7.234456 6.397955 9.932068 7.425789 4.670325 10.890016 7.762345 7.839735 12.761549 10.703158 10.290093 8.345487 7.439507 11.024849 8.695317 11.566422 9.377315 9.892304 10.020292 11.155269 10.492838 11.191188 11.125168 9.971946 -1.868806 9.335274 8.448230 12.105314 9.184415 11.281391 9.268800 11.019103 11.186111 7.855682 13.909682 9.982136 11.527773 12.637848 9.730151 4.716129 0.587941 11.038247 10.524827 9.827266 TCGA-A7-A26H 72 0 NA 724 breast stage iia t1 n1a m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 5 2 5 3 4 2 3 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.392901e-06 8.669932e-07 15.625 61.4583333333333 2.08333333333333 11.4583333333333 9.375 11.0113879 10.3949719 11.9799344 10.3265116 8.1540910 8.9190811 10.5249022 10.1925826 8.9859831 13.5905907 11.1464673 10.9085376 1.0626744 13.4718808 4.5862183 9.3288564 5.1287429 8.2400753 9.5509978 13.0075049 2.9206363 13.2612158 5.5464716 7.5401707 11.3373250 7.5444552 -0.9373256 8.9878910 10.3099898 3.1501210 7.3958109 8.4013920 NA 4.6625701 10.2347705 11.0964227 9.5979309 11.6864228 10.5837652 12.0511628 8.9837526 11.7460889 14.9158189 9.7628222 9.4213068 11.1051700 12.0164883 4.8175414 2.0626398 9.6201194 11.4462249 -0.9373256 11.5394018 5.2623279 7.1287450 6.0626549 10.9807734 12.3001643 10.1986854 12.6974100 13.5158298 7.6792042 11.0271770 10.7520574 11.7729239 11.4834054 5.5464716 13.4802774 11.3986042 0.3846025 10.2149404 9.6220328 3.5577164 6.0284410 9.8513740 10.7076385 9.9167447 10.8655758 3.4889263 9.4251475 13.2012474 11.4295242 9.9669139 9.2884656 1.11040000 1.11040000 0.03326700 0.47667000 -0.01277300 0.02160300 0.00346870 -0.00650500 0.65627000 0.65627000 0.66235000 -0.00180140 -0.00180140 -0.00678130 -0.00678130 -0.00678130 -0.00401620 -0.00401620 -0.01945200 0.02651400 0.05751100 -0.51599000 0.77329000 1.59880000 0.01866300 0.01866300 0.01866300 0.00402430 -0.03395000 -0.03395000 0.00000000 -0.53226000 -0.01023200 -0.01277300 0.02160300 0.02160300 -0.00013862 -0.00650500 -0.00650500 0.48475000 -0.01202400 -0.24995000 -0.00166290 -0.00166290 -0.00166290 -0.00166290 -0.00180140 -0.00180140 -0.00678130 -0.00678130 -0.00678130 -0.00678130 -0.00401620 -0.00401620 -0.00401620 -0.01945200 0.02651400 0.02651400 0.05751100 -0.01615400 -0.51599000 0.77329000 0.00736090 0.01866300 0.01866300 0.00402430 0.14622000 0.02272500 0.02272500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.748 0.000 -0.218 0.298 0.000 0.000 0.000 0.000 0.000 1.110 0.000 0.000 0.146 0.000 0.000 0.000 0.000 0.477 0.000 0.000 0.000 0.000 0.000 0.000 0.468 0.000 0.656 0.656 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.748 0.000 -0.218 0.298 0.000 0.000 0.000 0.000 0.000 1.110 0.000 0.000 0.146 0.000 0.000 0.000 0.000 0.477 0.000 0.000 0.000 0.000 0.000 0.000 0.468 0.000 0.656 0.656 0.000 0.000 0.000 0.000 7.9513990 4.2721053 4.3845817 10.2515535 11.3450201 7.5466329 11.8927746 8.4829213 7.9798190 1.0626744 11.5833970 11.1613803 2.7630928 3.7905740 4.5383892 8.1381346 4.1711828 10.3873987 11.3712791 11.3116209 9.0327615 2.9695465 7.8074895 9.8732272 6.5862183 7.6400844 2.8700096 -0.9373256 11.1554127 6.2325802 7.0341992 7.9680424 5.8108492 10.5749121 10.5930619 4.6773673 8.0168517 NA 7.3641522 12.3622929 9.2812188 6.2672268 -1.9373256 6.6056869 8.8554460 NA 2.5220809 -0.9373256 5.8175440 6.3975104 2.8175414 10.0877952 NA 7.9605013 10.1967610 10.0077336 5.0168528 9.9229667 13.2481505 8.5684673 2.5862123 3.6773617 13.0116615 2.2325687 NA 0.6476369 -0.9373256 13.7337366 5.3572775 8.7751826 13.4718808 10.6262047 10.7121364 13.0075049 13.3054576 9.5644929 11.2065171 13.2665771 9.8562590 9.6201194 8.7101142 0.3846025 8.3070195 11.7492655 10.8505582 11.6848218 7.9159654 13.7314824 8.9717987 6.1815975 8.6429142 9.7239884 9.9853106 7.2986702 8.2598722 11.1464673 6.7208667 3.7905740 12.9753111 5.0626571 7.9700420 12.6390809 10.3270982 11.3176842 7.5091598 8.2623279 12.8225958 6.4420345 13.4213247 9.5979309 10.2171573 9.4915391 11.9567154 10.1361278 10.6879079 10.8360009 9.7253240 6.9452987 8.8698816 7.7099702 11.4462249 6.1179381 11.5394018 8.7956709 10.1826764 10.9807734 8.3789823 13.6589619 9.9721737 10.3541141 13.6873368 10.3049366 2.9206363 0.3846025 11.0002134 11.4906231 10.3670069 TCGA-A7-A26I 65 0 NA 661 breast stage iia t2 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 1 1 5 5 5 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 8.323135e-07 1.387189e-07 13.7931034482759 24.1379310344828 6.89655172413793 31.0344827586207 24.1379310344828 10.0423368 9.9158422 11.9236706 10.2906626 8.1218521 8.6388591 9.9609873 10.4302501 9.2288187 13.1000189 10.3093396 10.5226724 2.4679315 12.3780505 4.7005951 9.3814203 7.0914481 8.4383261 7.5079484 5.0286487 -1.8541269 11.6019737 10.7034680 9.1000915 10.2746431 6.1628122 -0.2689906 10.3757244 11.0111576 5.1794274 8.6705461 8.0024297 10.3861994 4.2752902 10.4136689 10.6535513 9.9042276 10.4060418 10.0179095 12.0391162 NA 5.2440346 15.1274044 8.4942568 8.5628018 11.2409067 11.0927279 4.4127883 NA 9.7839876 10.3657779 -0.8538662 11.8600352 6.8705176 6.5297085 4.9008910 9.5559256 12.0949191 9.7867012 11.7528722 12.8886822 6.9757276 11.6691987 11.0406308 11.4563331 11.4254698 4.9788958 11.7377604 7.5638567 3.2752902 10.9442736 9.6841933 4.3372116 7.0972895 11.0377880 10.1621162 10.2626732 10.0374083 5.8464432 10.4391885 12.0435662 13.6576026 9.8726483 9.3945249 3.39120000 0.68741000 -0.37189000 0.02496900 -0.36204000 0.33027000 0.35790000 0.00027728 0.35186000 0.35186000 0.35871000 1.98620000 0.32898000 0.01768400 0.01936300 0.01936300 -0.35761000 -0.35761000 -0.37338000 -0.36352000 -0.37200000 -0.36604000 -0.35236000 0.00000000 -0.36011000 3.65690000 0.45820000 -0.39519000 0.02384700 0.01377200 -0.00981850 -0.37041000 0.41030000 -0.36204000 -0.37876000 -0.36386000 0.35790000 0.00027728 0.38072000 -0.40340000 0.69540000 0.35430000 0.39562000 0.39562000 2.43240000 -0.77337000 0.32898000 0.37199000 -0.77753000 0.01936300 -0.00041585 -0.80823000 -0.35761000 -0.38640000 -0.38640000 -0.37234000 -0.36352000 -0.37887000 -0.38616000 -0.38403000 -0.36604000 -0.35236000 -0.01835300 -0.35324000 0.45820000 -0.39063000 0.38717000 -0.38044000 -0.39018000 1.618 0.329 0.000 0.000 -0.358 -0.358 -0.372 -0.379 -0.372 0.000 -0.361 -0.352 -0.352 0.000 0.000 -0.360 0.098 0.126 0.126 -0.391 -0.391 0.375 -0.380 0.355 0.355 0.000 0.000 -0.362 -0.362 -0.041 -0.371 0.358 0.000 -0.385 -0.385 0.352 0.352 0.000 0.000 0.000 0.000 1.618 0.329 0.000 0.000 -0.358 -0.358 -0.372 -0.379 -0.372 0.000 -0.361 -0.352 -0.352 0.000 0.000 -0.360 0.098 0.126 0.126 -0.391 -0.391 0.375 -0.380 0.355 0.355 0.000 0.000 -0.362 -0.362 -0.041 -0.371 0.358 0.000 -0.385 -0.385 0.352 0.352 0.000 0.000 0.000 0.000 7.5123265 NA 6.6136097 10.4933489 11.4350146 6.3022898 10.6069721 10.1365941 9.3535189 -0.2689906 11.2898658 11.0932139 1.9533770 -1.8541269 4.9788958 9.8815603 3.4679315 9.7992973 11.8507726 12.2012868 9.5790681 1.4679576 8.2995565 10.3859012 5.6217383 8.7680563 6.0943712 0.9533770 9.8259242 0.1460035 8.6861325 8.8756250 5.7158604 9.3201437 11.1197017 1.8464331 9.3861994 5.6851637 9.2584438 12.1478523 7.7625535 7.1060059 -0.2689906 2.4679315 7.4746794 4.6851609 1.9533770 NA 3.4314090 5.3659479 1.3159140 10.4215469 0.4679055 11.5247056 10.6542944 9.9351304 4.3554603 10.2756094 13.2087251 8.9804755 3.0039800 3.3939378 10.3882853 3.3159285 NA 1.4679576 1.9533770 10.440625 9.867958 8.113231 12.378050 9.550081 11.083562 5.028649 8.941232 8.445212 10.536173 14.587862 10.487801 9.783988 7.740329 NA 8.027118 10.136817 10.462852 11.324825 4.335826 13.692746 8.962988 7.588948 8.584796 9.123957 9.171116 6.179427 4.028649 10.309340 10.264297 2.669571 10.912533 6.657757 8.339764 12.436887 9.771257 10.498600 6.814889 7.605436 10.360323 5.449786 11.660165 9.904228 9.726263 9.223488 12.288351 9.914189 11.979883 9.763472 9.993453 NA 9.378162 6.909051 10.365778 5.775361 11.860035 8.314677 9.475733 9.555926 8.079695 13.648308 10.661950 10.633091 12.153470 11.111248 NA NA 10.874775 10.417759 8.838620 TCGA-A7-A26J 49 0 NA 627 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 1 6 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.733986e-07 9.52380952380952 19.047619047619 0 47.6190476190476 23.8095238095238 11.3128517 10.9390413 12.2804864 10.5125827 8.9057736 9.1165077 9.8823005 9.8319512 8.6046492 13.1702711 11.8761562 10.6578988 2.0779607 13.0793157 4.1710627 9.3334553 4.3208096 8.6778673 9.5703417 12.9906442 4.4929940 13.4342597 5.1822911 9.9326317 10.7194041 9.3112545 0.1710787 8.2003508 10.1791423 0.9784153 7.4839471 7.9832410 NA 4.3998820 10.3356565 11.4302186 10.6077754 11.4874868 9.8925903 12.0119401 0.1710787 10.4349199 14.2319708 9.6754658 8.8766962 13.0126773 12.3751764 4.4189927 3.3003434 9.8140181 11.9643623 -1.8287932 11.1715921 5.7179588 6.7746896 4.9259520 10.7607150 12.0601875 10.7316355 12.3476266 13.1979330 8.1512033 11.1826405 11.2185951 11.4900302 11.7907107 5.6629176 12.0223249 9.7063392 NA 9.8198708 9.7092527 4.2728817 6.2478801 11.1939518 10.3905349 10.3722688 10.8223398 2.8715086 7.6709097 12.6515385 11.7017140 10.0594265 8.9679147 1.3279000 1.3279000 0.0260920 0.0260920 0.0000000 0.6656700 0.6741900 -0.6895200 -0.6987500 0.6732600 0.6732600 -0.0136770 -0.0136770 0.6564500 3.6569000 -0.6792100 0.6403000 0.6403000 -0.0411590 -0.0120240 -0.0091286 0.6527700 0.6527700 0.6527700 -0.0543120 -0.0543120 -0.0526660 0.8417900 -0.0887840 -0.0114730 -0.0172540 0.0260920 0.0000000 0.0000000 0.6656700 0.6656700 0.6502000 -0.6895200 -0.6895200 0.0118180 0.0118180 -0.6987500 -0.0245240 -0.0245240 -0.0245240 -0.0245240 -0.0136770 -0.0136770 0.6564500 -0.7233200 -0.6837800 -0.6960300 0.6403000 0.6306200 0.6306200 -0.0411590 -0.0120240 -0.0120240 -0.0083005 -0.7028900 0.6527700 0.6527700 0.0075000 -0.0543120 -0.0543120 0.5712000 -0.0136770 -0.6731500 -0.6825000 0.000 0.000 0.656 0.000 0.640 0.640 0.000 0.000 0.000 0.026 -0.649 0.653 0.653 0.000 0.000 0.000 0.000 0.000 1.328 0.571 0.571 0.000 -0.673 0.000 0.000 0.000 0.000 0.000 0.000 0.666 0.666 0.674 -0.015 0.000 0.000 -0.699 -0.025 0.000 0.000 0.115 0.115 0.000 0.000 0.656 0.000 0.640 0.640 0.000 0.000 0.000 0.026 -0.649 0.653 0.653 0.000 0.000 0.000 0.000 0.000 1.328 0.571 0.571 0.000 -0.673 0.000 0.000 0.000 0.000 0.000 0.000 0.666 0.666 0.674 -0.015 0.000 0.000 -0.699 -0.025 0.000 0.000 0.115 0.115 8.0491145 NA 5.8004211 10.1476280 11.8584395 6.7732434 10.5125827 8.8002658 7.9328643 -1.8287932 11.2869203 11.7068374 4.1934327 3.7857702 3.6304987 9.3546992 3.9784153 9.8474617 11.5369761 11.5628444 9.3277790 4.3805147 8.3484834 9.4610826 5.9976131 3.3805217 2.3409895 NA 11.3417713 7.3950654 6.7894489 7.7802425 7.2505486 9.5330077 11.2331100 4.1018013 8.0658814 -1.8287932 8.1497740 11.3812786 8.8749675 5.7102224 -0.2440015 5.3309348 8.9646672 -0.8290494 2.0779607 -0.8290494 4.3409895 3.6340937 1.3409610 10.7404448 0.1710787 8.7371179 10.7623524 10.1930848 4.5804530 9.4535731 13.7138841 8.2438666 2.4189995 2.4929812 12.6077754 1.7560412 -1.8287932 -0.2440015 0.1710787 14.231572 6.131067 8.424911 13.079316 10.397410 10.962227 12.990644 12.693339 8.540399 11.871898 13.538513 10.948525 9.814018 9.231760 1.871489 7.634588 12.286920 11.1146775 11.4561770 8.2492144 12.5425662 8.9057736 5.3409895 9.8593141 9.7732988 10.7507616 6.5504421 8.0704210 11.8761562 5.8363988 4.8004185 11.2413525 6.6788578 7.7346033 11.1747574 9.8619349 10.9499623 9.3602708 8.7418684 13.9731005 5.2900041 11.6611914 10.6077754 10.7375936 9.0047446 11.0888088 9.5319109 10.2297321 10.8496640 9.1281658 -1.8287932 8.5464292 8.4502335 11.9643623 4.5633839 11.1715921 7.4633854 10.0185128 10.7607150 8.0943913 13.4929567 10.2618379 9.7304409 13.2263886 9.9880474 0.1710787 -4.0806981 10.4555988 10.9713571 9.9200953 TCGA-A7-A2KD 53 0 NA 679 breast stage iiia t2 n2a mx female 2011 NA yes infiltrating ductal carcinoma 8 black or african american not hispanic or latino NA NA 1 1 2 1 2 1 1 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 8.669932e-07 2.774378e-07 30.3030303030303 21.2121212121212 0 21.2121212121212 27.2727272727273 11.47143522 9.88103838 11.26491134 9.56958698 10.90673820 10.28325820 9.54350884 10.07628424 10.13259342 13.23075068 10.23646739 10.46504770 2.26429621 16.87040449 3.18181815 9.77998506 7.42751567 8.97929400 10.32917776 12.78495852 0.09437121 13.14003463 6.00125054 8.59945728 11.08481882 3.18181815 -0.32066629 10.17284475 10.67226108 NA 8.11949988 7.68868463 0.09437121 4.64894856 9.74675716 11.67084463 9.05073649 11.00350330 10.46177502 11.74249311 4.04855880 11.32453088 14.79827737 7.90560663 9.77207996 10.85029101 11.99031418 4.92725174 -1.90562879 8.67650226 10.69148173 0.67933371 10.93139682 6.40270001 6.88226276 5.10558590 10.42247417 12.28580512 10.17850427 11.84160920 12.78140785 7.08020249 10.51300350 10.24017466 11.53963381 10.57590744 5.52062654 11.91144386 11.57779819 4.09436276 9.83245255 9.27177978 2.73820578 6.11116906 8.64414506 9.98348389 11.57439310 9.92408296 1.90172613 9.15032053 12.73821646 12.03118223 9.99598149 9.42975069 0.077430 0.077430 -0.317160 -0.315170 0.033408 0.678550 -0.319490 0.022725 -0.708180 -0.656220 1.049900 -0.696400 0.068665 -0.024251 -0.041838 -0.041838 1.324400 0.128550 -0.344000 -0.313070 -0.321930 -0.540880 3.656900 0.243260 1.197000 -0.266120 -0.265280 1.439000 -0.686240 -0.254910 -0.329710 -0.320380 -0.300630 0.034078 -0.339380 -0.351650 -0.319490 0.022725 0.348760 -0.334100 0.110120 -0.755900 -0.661960 -0.648280 0.343560 0.343560 -0.313770 -0.364650 -0.024251 -0.041838 -0.410910 -0.410910 -0.684780 0.128550 0.128550 -0.327090 -0.313070 -0.325510 -0.340570 0.676410 -0.703700 1.064400 0.352670 -0.656680 -0.527570 0.020763 0.023987 0.052493 0.310010 -0.300 -0.300 0.000 0.000 -0.685 -0.556 -0.327 -0.313 -0.322 0.000 -0.669 -0.693 0.632 0.625 0.625 0.000 -0.256 0.000 0.000 0.000 0.000 0.000 0.000 -0.322 0.000 -0.320 -0.320 -0.282 0.000 0.392 0.000 -0.319 0.000 0.000 0.000 0.000 0.514 -0.393 -0.050 -0.446 0.193 -0.300 -0.300 0.000 0.000 -0.685 -0.556 -0.327 -0.313 -0.322 0.000 -0.669 -0.693 0.632 0.625 0.625 0.000 -0.256 0.000 0.000 0.000 0.000 0.000 0.000 -0.322 0.000 -0.320 -0.320 -0.282 0.000 0.392 0.000 -0.319 0.000 0.000 0.000 0.000 0.514 -0.393 -0.050 -0.446 0.193 8.02361853 NA 5.79480053 10.08623643 12.32347951 6.75934095 10.91114395 9.05305077 8.28851406 0.90172613 11.40625045 11.93991109 7.25926684 -1.90562879 3.34228450 8.07735410 4.60215397 11.22090343 11.66184110 10.51721348 9.01322356 5.99522671 8.89039987 9.48560393 6.81887356 5.53730228 2.79479014 -1.90562879 11.10698483 7.01620100 6.04855662 8.24917841 11.47792959 10.75705092 9.89202180 5.09435854 8.91294231 6.45191168 6.99220533 12.60215492 8.21459792 7.49096476 -0.90562879 0.09437121 8.01620100 5.65660219 3.70907002 0.09437121 6.11672863 4.50951217 3.41628579 9.90533345 0.67933371 10.65373738 9.88430135 10.12295712 5.10558590 9.84297239 13.14505923 8.52481279 4.22364651 4.07164255 11.18347969 2.67933371 NA -0.90562879 2.79479014 13.354111 6.088714 8.733701 16.870404 9.769435 9.763245 12.784959 12.889284 9.077924 11.739118 12.886083 10.331271 8.676502 7.817168 3.952343 8.039804 11.808284 11.4689923 12.2200159 8.0929505 12.6524192 8.5352295 6.4952395 8.9647250 10.7917623 10.9206187 7.5781764 9.4666812 10.2364674 6.8984913 0.6793337 10.2100542 10.5984344 9.7768370 11.2066369 9.8695590 10.4224742 7.8575724 9.3546917 11.8462181 6.1277839 11.3464521 9.0507365 10.2564368 10.2576954 11.5909644 10.2268600 10.7012281 10.9341546 8.9967353 1.4162993 9.5814718 7.8628258 10.6914817 6.4430878 10.9313968 7.7632456 10.5214112 10.4224742 7.3255816 13.4174854 9.4963063 10.0855278 13.8280377 11.1569124 1.9017261 NA 10.2041910 10.2912697 9.7422683 TCGA-A7-A3IY 71 0 NA 345 breast stage i t1c n0 m0 female 2011 NA yes mucinous carcinoma 0 white not hispanic or latino NA NA 3 3 NA NA 5 1 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 1.733986e-07 21.4285714285714 7.14285714285714 0 35.7142857142857 35.7142857142857 10.6005055 9.0090369 10.8232225 7.2104580 8.7161575 8.9793918 9.7245210 10.1650935 10.2806046 12.9807638 11.0163542 10.3769766 1.2898935 11.0656206 2.2898935 11.2979212 7.3248880 8.3027166 10.6615138 12.9994074 1.0675010 13.5920421 7.1155327 9.8027968 9.9409444 9.3003210 3.9088033 12.7016368 10.2061988 2.6524635 8.1064195 9.0552380 -0.5174615 3.4367349 9.2357546 10.3444002 9.8929891 9.8667819 9.4147527 10.3905551 13.6076688 11.4949878 14.5792118 6.1664443 10.7499098 10.8858162 10.4722871 3.6524635 4.9419702 8.2256895 10.9381219 0.4825385 11.1980709 5.8748560 6.3590555 4.1263947 10.7708271 11.6689616 10.7032185 11.6970088 12.3966426 8.3894283 10.7574984 10.6143948 10.7931506 10.1920525 3.9419702 11.3739418 10.8828837 -1.5174615 10.2931095 8.7292785 2.4217754 6.4073511 10.7705387 10.4334582 10.0265363 9.2556770 5.2104590 7.3682340 12.5991255 12.1764603 9.3636519 9.4381878 0.0011093 0.0011093 -0.0486130 -0.0486130 0.0144700 0.0020805 -0.0044312 -0.1659200 0.0065956 0.0065956 0.0065956 -0.0008316 -0.0008316 -0.0030475 -0.0030475 -0.0030475 0.0033299 0.0033299 0.0036076 0.0011093 0.2848500 -0.0083005 -0.0083005 -0.0083005 -0.0107840 -0.0107840 -0.0107840 -0.0121620 -0.0064970 0.0011093 0.0058309 -0.0486130 0.0144700 0.0144700 0.0020805 0.0020805 -0.0044312 -0.1659200 -0.1659200 0.0000000 -0.0140900 0.0065956 -0.0030475 -0.0030475 -0.0030475 -0.0030475 -0.0008316 -0.0008316 -0.0030475 -0.0030475 -0.0030475 -0.0030475 0.0033299 0.0033299 -0.0076101 0.0036076 0.0011093 0.0011093 0.2848500 -0.0081624 -0.0083005 -0.0083005 0.0033766 -0.0107840 -0.0107840 -0.0121620 -0.0049844 -0.0400730 -0.0400730 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.285 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.285 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.46766831 NA 5.77715930 10.98163628 11.25113572 7.68544543 10.56568475 8.88133486 9.25134251 NA 12.67513889 11.93977250 4.57000139 2.06750105 1.28989347 7.93786518 4.95827198 11.62655869 11.18102550 10.10641938 9.41696596 1.06750105 8.67975454 10.45623520 6.13359024 4.63228567 1.28989347 NA 10.44976408 4.65246355 6.75400024 7.66244693 6.41327589 10.65854578 9.39467876 6.47689198 8.93991884 0.06750105 8.02750243 13.01750938 7.77025027 9.53102464 0.48253855 -1.51746145 8.35290238 -0.51746145 2.87485597 0.06750105 4.43673486 4.57000139 3.87485597 11.52966173 2.80446664 9.13089536 10.68128981 9.69503424 5.43673486 8.74698048 12.33935240 9.47122262 1.28989347 3.57000139 11.02798504 4.06750105 NA 1.28989347 2.06750105 13.1751032 5.7586630 8.8834174 11.0656206 10.5300026 10.5087155 12.9994074 12.0788441 8.8944513 10.1096157 13.0632086 10.6076283 8.2256895 10.0366470 0.8044666 7.3682340 10.7484459 10.6163222 12.1172355 5.5910630 14.0541110 9.4979528 6.5214575 8.1602577 8.2795019 9.3898567 7.7586623 8.5936735 11.0163542 6.7999499 1.0675010 10.0857006 10.2898928 7.1770697 12.3520353 10.0684393 10.9182081 8.5323863 9.6278332 8.9733889 4.6322857 11.7070491 9.8929891 10.7702502 9.5035177 10.5395142 9.4512047 10.3647988 9.8929891 8.2307309 NA 9.6591661 6.3591170 10.9381219 2.8044666 11.1980709 7.4043786 10.6596459 10.7708271 6.6968563 14.6489363 10.5650196 10.4389140 12.6816734 10.3567508 0.8044666 -1.5174615 10.3571351 9.5193982 8.8972232 TCGA-A7-A3IZ 62 0 NA 322 breast stage iia t2 n0 (i+) m0 female 2011 NA yes infiltrating lobular carcinoma NA white not hispanic or latino NA NA 1 1 2 2 1 1 3 8 1 2 0 6 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.872705e-06 6.935946e-07 17.3333333333333 41.3333333333333 6.66666666666667 25.3333333333333 9.33333333333333 11.00574804 10.21902110 12.38109639 9.08159954 8.56741235 8.52827711 11.52364154 9.35047935 10.19047647 8.88289122 12.52040430 10.55448496 3.29482657 13.31527602 4.41412200 7.05522711 5.50293202 8.57639327 10.60049157 13.83334631 4.34373470 15.53876626 0.43680147 9.82835930 10.99812984 7.08069816 -1.56319853 8.07346626 9.77446373 1.43685476 7.21162941 6.79439377 4.74062000 3.96040050 10.32634578 9.76045966 11.01356240 11.35607766 10.37531882 11.13467826 13.13868978 11.82741392 14.15307187 9.12072258 10.51298938 12.24339150 11.95917819 4.36758074 NA 9.15280376 9.70421388 0.02176397 10.52098584 7.21820188 5.00669747 4.64629517 10.21532975 12.34072370 9.70479901 11.29423975 12.97696990 7.23774152 10.72973858 10.83887064 11.00313382 11.91939778 5.98373697 11.78280148 12.15291107 -0.56319853 10.09505332 9.01804241 3.14226638 5.15108759 10.01615781 9.89062696 10.47678903 10.00003818 2.60677384 4.29481922 12.30720659 10.45469421 10.17408915 9.66986228 0.6353600 0.7396700 0.0051359 0.0000000 0.0181740 0.0141900 0.0063871 0.0169850 3.6569000 -0.0208240 0.0112610 -0.0012352 0.0027745 0.0098669 2.4645000 3.6569000 -0.0180780 -0.0072639 -0.3130700 -0.0030475 -0.0102320 -0.0532060 -0.0532060 -0.0532060 -0.0829340 -0.0829340 -0.0829340 -0.0147780 -0.0510040 -0.0168410 0.0442900 0.0051359 0.0181740 0.0204830 0.0141900 0.0141900 0.0063871 0.0144700 -0.8690800 0.0073609 -0.8534500 -0.8433100 0.0073609 0.0073609 0.0073609 -0.0169790 0.0027745 0.0027745 0.0098669 -0.8573400 -0.8325200 -0.8325200 -0.0072639 -0.0072639 -0.0072639 -0.3154100 -0.0030475 -0.0030475 -0.0202750 -0.8697000 -0.0532060 -0.0532060 0.0207630 -0.1195200 -0.0829340 -0.0147780 -0.0011087 -0.0418380 -0.0484780 0.000 0.000 3.657 2.824 0.000 0.000 -0.315 0.000 0.000 0.000 -0.809 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.843 0.000 0.000 0.000 -0.107 -0.107 0.000 0.000 3.657 2.824 0.000 0.000 -0.315 0.000 0.000 0.000 -0.809 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.843 0.000 0.000 0.000 -0.107 -0.107 8.3542141 NA 4.6847683 10.9049568 10.4626735 6.1303976 11.4652660 9.5208597 9.4061276 3.1372740 11.2518248 10.8311626 5.3675807 2.0217995 4.0515548 8.4368419 3.3437347 8.8462328 11.6097381 11.0804726 9.3527212 5.1372822 7.8504700 10.2324757 5.9760015 2.8291595 NA NA 9.7638330 8.0066975 4.5029288 10.1163220 4.8291595 11.5600661 11.3461725 4.7222420 9.2994791 NA 7.3497315 12.9361272 8.9971747 8.2409730 -1.5631985 0.4368015 8.5492814 6.3910373 5.3437311 1.0218350 2.6067738 7.5165132 0.7587296 10.3519743 NA 6.7129658 10.3418527 9.6248125 3.4812343 9.9871077 11.6823946 8.2979287 2.9604005 2.6847739 11.2320699 4.5865906 NA -1.5631985 -1.5631985 17.295221 5.051550 8.176622 13.315276 9.714710 10.492124 13.833346 13.096671 12.320705 10.879526 12.417963 11.836921 9.152804 8.938679 1.606774 7.648730 11.605044 11.137932 11.954511 8.363138 13.955678 8.474389 3.481234 10.132505 9.107498 10.949217 5.854694 5.524305 12.520404 6.924682 3.566121 11.754961 8.850470 7.476666 9.646904 9.963341 10.629443 9.816762 8.976001 13.007943 1.896272 10.791331 11.013562 9.955495 9.258616 11.602220 10.448768 9.974060 10.733758 8.592925 NA 9.028299 6.366633 9.704214 2.244187 10.520986 4.829159 11.214508 10.215330 7.663254 13.994665 9.848353 9.439657 12.405689 10.542750 NA 2.137274 10.618926 10.759615 10.531909 TCGA-A7-A3J0 62 0 NA 313 breast stage iia t2 n0 m0 female 2011 NA yes mucinous carcinoma 0 white not hispanic or latino NA NA 3 5 4 3 5 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 4.855162e-07 31.0344827586207 6.89655172413793 6.89655172413793 24.1379310344828 31.0344827586207 10.387789 9.930719 11.562372 9.928809 8.743516 8.551368 11.615455 10.021680 9.929574 13.792853 10.797883 10.557807 3.331949 11.257828 3.216470 10.070996 7.847448 8.019528 9.399695 13.736956 3.175828 13.611770 7.165490 10.437429 10.551616 8.140626 1.046561 10.670430 9.556818 2.505993 8.486379 9.320927 NA 4.134007 9.366221 9.744385 10.398316 9.225213 9.730859 11.232508 13.446227 11.939850 14.442049 9.089035 11.205933 12.168244 11.427010 3.368475 1.046561 8.848257 9.343465 -1.953439 10.890862 3.438865 5.585708 5.123364 10.876073 11.680111 10.057776 11.970062 12.518097 6.715434 10.449827 10.301480 10.851285 11.058125 4.840967 11.183700 11.194707 NA 10.182258 8.994916 2.368489 4.690406 10.943070 10.601617 10.899663 9.988696 1.216486 7.399695 10.613078 10.410957 9.780411 8.955691 0.29803000 0.29803000 0.00000000 0.00000000 0.00097064 -0.01367700 -0.01038700 -0.01038700 0.78524000 0.78524000 0.79084000 -0.01711600 -0.01711600 0.76312000 0.76312000 0.76312000 -0.01601700 -0.01601700 0.78833000 -0.01986300 -0.02753500 0.70455000 0.70455000 0.71039000 0.62497000 0.69148000 0.65608000 -0.05185600 -0.05576900 -0.01078400 0.00097064 0.00000000 0.00097064 0.00097064 -0.01367700 -0.01367700 -0.01038700 -0.01038700 -0.00193990 -0.01078400 -0.01585100 0.78524000 0.63372000 0.63372000 0.63372000 0.63372000 -0.01711600 -0.01711600 0.76312000 0.76312000 0.76217000 0.76217000 -0.01601700 -0.01601700 -0.01601700 0.78833000 -0.01986300 -0.01986300 -0.02753500 -0.03653800 0.70455000 0.70455000 -0.00940460 0.62497000 0.69148000 -0.05185600 -0.02603000 -0.06692200 -0.05415100 0.000 0.000 0.763 0.763 0.000 0.000 0.788 0.000 0.000 0.000 0.000 0.705 0.705 0.000 0.000 0.691 0.691 0.000 0.298 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.785 0.785 0.634 0.634 0.153 0.153 0.000 0.000 0.763 0.763 0.000 0.000 0.788 0.000 0.000 0.000 0.000 0.705 0.705 0.000 0.000 0.691 0.691 0.000 0.298 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.785 0.785 0.634 0.634 0.153 0.153 8.24376522 -1.95343909 4.33194880 10.45248764 11.22365652 6.96824054 11.27341221 8.18380854 9.99280779 -1.95343909 11.00636935 11.08936553 11.80060086 2.13402375 2.80142771 8.17969068 5.21647427 9.42158793 11.96522542 10.54913170 9.06960980 3.71897529 7.65941727 10.39472334 6.39969577 3.92919448 2.50599252 NA 10.26873965 5.19629622 5.82133521 8.55037433 3.53840159 10.98392418 10.42158793 3.97728908 8.91999251 1.95345150 6.65387833 12.57610107 8.47909027 7.97136076 -0.95343909 0.63152341 8.40739567 1.63152341 1.74700062 0.04656091 5.19629622 5.45856902 2.29448842 10.13235282 NA 8.96615674 10.51415403 9.38973415 5.52228178 9.80352170 12.39797090 7.85067943 6.28972198 3.36847503 11.53639648 4.21647039 -1.95343909 0.04656091 0.36848900 13.204578 5.675906 8.788858 11.257828 10.809346 9.881809 13.736956 13.350044 9.442875 10.628690 12.709328 11.430928 8.848257 7.629631 2.046561 7.818038 11.029898 11.160128 12.368054 7.944394 13.742701 8.843399 9.290317 8.723387 9.099796 10.957557 6.722506 9.256002 10.797883 6.554343 NA 10.668829 8.315675 8.307668 12.053751 10.251425 11.014495 8.522282 10.177119 9.884571 5.601138 10.507427 10.398316 9.901027 10.542903 11.217725 9.854708 9.706098 11.032390 10.296847 NA 10.012466 5.903224 9.343465 5.668601 10.890862 9.837304 12.139884 10.876073 7.338916 13.718753 10.033813 10.350900 13.783400 10.612840 4.438865 -3.012752 10.214280 10.019169 9.770636 TCGA-A7-A3J1 63 0 NA 343 breast stage ia t1c n0 mx female 2011 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 1 4 3 4 4 4 3 6 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.733986e-07 13.6363636363636 13.6363636363636 0 45.4545454545455 27.2727272727273 10.4606846 9.9361763 12.2233110 9.8475671 8.3034497 9.4508259 10.9825946 9.4862150 10.7109163 8.7912437 9.4007727 10.4786295 3.0975434 13.5553615 3.3750811 9.5222843 6.4582934 8.2998916 10.7055482 12.8344597 0.8605259 14.4152321 7.5268568 10.1487098 10.5151422 5.8986413 NA 13.4824674 8.4074008 2.8605060 8.7878608 7.2747388 0.6381202 5.1084325 10.1226010 10.4054706 10.0185748 11.4472119 9.7457667 11.8790044 0.6381202 10.4494884 14.6872674 8.0492436 10.1865857 12.1099583 11.2051191 5.6305802 7.3592128 9.3437462 11.2279209 -1.9467496 10.6847831 5.5529979 7.2155427 4.8213378 10.4230212 11.4748216 10.3770504 11.4423793 12.5853245 8.9258262 10.6498069 10.5013759 11.0886377 11.6813689 5.6970065 11.2505216 10.8785076 -0.9467496 10.5046200 9.0261311 3.7558063 6.7912437 10.8495965 9.8291730 10.6997099 10.0218181 2.4454619 9.6362340 13.5022999 12.6227696 10.3809846 10.0051644 0.5290600 0.5345000 0.0000000 0.0000000 0.0088920 0.0420240 0.0068044 -0.5484400 -0.5372300 0.0079175 0.0079175 0.0127950 0.0127950 0.0026357 0.0026357 0.0026357 0.0019418 0.0019418 0.0059098 -0.5340900 -0.3977500 -0.0105080 -0.0105080 -0.0105080 -0.0309390 -0.0087146 -0.0202750 0.0120970 -0.0023553 -0.5332700 -0.1914900 0.0000000 0.0088920 0.0026357 0.0420240 0.0420240 0.0068044 -0.5484400 -0.5484400 -0.0037395 -0.0343590 -0.5372300 0.0111210 0.0111210 0.0111210 0.0111210 0.0127950 0.0127950 0.0026357 0.0026357 -0.5374400 -0.5374400 0.0019418 0.0019418 0.0019418 0.0125160 -0.5340900 -0.5340900 -0.3977500 -0.5490500 -0.0105080 -0.0105080 -0.1950000 -0.0309390 -0.5647500 0.0120970 0.0070826 -0.2008700 -0.2132200 0.000 0.000 0.000 -0.537 0.000 0.000 0.000 -0.534 -0.398 0.000 -0.549 0.000 0.000 -0.195 -0.195 0.000 0.000 0.000 0.534 0.000 0.000 0.000 -0.201 -0.191 -0.191 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 -0.537 0.000 0.000 0.000 -0.121 -0.121 0.000 0.000 0.000 -0.537 0.000 0.000 0.000 -0.534 -0.398 0.000 -0.549 0.000 0.000 -0.195 -0.195 0.000 0.000 0.000 0.534 0.000 0.000 0.000 -0.201 -0.191 -0.191 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.519 0.000 0.000 -0.537 0.000 0.000 0.000 -0.121 -0.121 7.96604048 -0.94674962 6.94796883 11.26838088 11.62181997 8.07470023 11.54700671 10.41460988 9.26261685 2.69701759 11.86100926 11.50130498 4.11923996 4.28197267 4.31993580 8.10299977 4.05315479 11.09412586 11.42315747 10.58550717 9.18436510 3.14061508 7.90957692 10.52964431 8.41619077 8.04183599 0.86052585 -1.94674962 10.70150886 7.52075695 6.44546849 8.14590821 7.38854173 11.40993195 10.96921735 5.31993941 9.12327225 1.05318086 8.60678051 11.89156732 9.88009698 7.55896248 -1.94674962 8.06577585 8.24667648 0.37506724 2.80803489 -0.94674962 6.95099673 6.87677354 5.45403109 10.28046631 NA 9.06157992 9.79588170 9.47416405 6.11384633 10.64724255 13.83494638 9.20670329 3.78107639 4.44546849 10.44305138 0.05311134 -1.94674962 2.37506724 3.18243806 11.776916 5.223075 8.465721 13.555362 10.494280 10.505135 12.834460 11.859802 9.319229 11.056494 12.923082 10.382387 9.343746 8.757055 2.445462 7.370564 11.289913 11.62324411 11.47941601 7.36603452 13.68219333 8.28437254 7.94341562 8.99786340 8.58842682 10.85436849 8.91501350 8.69339635 9.40077272 6.63058021 3.69700646 10.36688465 7.70060964 7.22827614 9.91617595 10.65376111 9.83533041 8.60068195 8.85405114 12.68943600 7.59230977 11.73353827 10.01857479 10.36348004 10.34662287 10.96248186 10.50100934 10.02971542 11.15430624 8.31053917 0.05311134 9.65548368 6.99859494 11.22792093 7.98978900 10.68478307 6.46254153 11.28721722 10.42302123 7.84113533 12.79950550 10.12494881 9.86050614 12.82752652 10.96697568 6.74663793 1.63812019 10.76352727 9.55399323 10.17306508 TCGA-A7-A3RF 79 0 NA 408 breast stage iia t2 n0 m0 female 2012 NA yes mucinous carcinoma 0 white not hispanic or latino NA NA 3 1 5 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.28315e-06 5.201959e-07 9.43396226415094 7.54716981132075 16.9811320754717 49.0566037735849 16.9811320754717 9.531106 9.320824 11.668007 8.597859 8.421586 7.872667 11.774103 9.372085 11.957911 13.246520 8.047933 10.428725 1.251689 9.505678 2.351204 9.205858 7.130807 7.424446 6.983466 13.644362 1.029276 15.149939 NA 10.133261 11.311006 8.567135 -1.555545 10.870309 8.394133 3.573593 8.507701 5.444306 NA 3.936157 9.432991 8.826930 9.847319 8.776343 9.348941 11.128178 14.093759 10.391578 15.846436 8.097636 13.342483 11.034660 10.706695 3.766235 8.042359 7.806251 9.408647 NA 10.500605 4.116731 2.766235 4.116731 9.848916 11.425339 9.837161 10.780534 11.904890 9.151666 10.239129 10.210007 10.053947 10.889063 4.784158 11.198985 12.240042 1.766214 10.325038 8.207519 2.447897 3.302290 10.768206 9.500944 10.819617 8.626701 3.444309 3.653759 10.293712 9.852636 10.297226 9.284298 0.00055459 -0.01917700 0.00291330 0.00147510 -0.01133500 0.00666530 0.00083195 0.00083195 -0.00069303 -0.00069303 -0.00027724 -0.00110870 -0.80923000 0.00332990 0.00332990 0.00332990 0.00041593 0.00041593 -0.00346270 -0.00774820 0.00000000 0.00332990 0.00332990 0.00332990 0.00388540 0.00388540 0.00388540 -0.00069303 0.00055459 0.00055459 -0.00124730 0.00291330 -0.01133500 -0.01133500 0.00666530 0.00666530 0.00083195 0.00083195 0.00083195 -0.00567570 -0.00567570 -0.01954000 -0.00747200 -0.00747200 -0.00747200 -0.00747200 0.00097064 0.00805670 -0.00083160 0.00332990 0.00332990 0.00332990 0.00041593 0.00041593 0.00041593 -0.00346270 -0.00774820 -0.00774820 -0.00951090 0.00138680 -0.00041585 0.00332990 0.00777830 0.00388540 0.00388540 -0.00083160 -0.00719580 0.00805670 0.00805670 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.804056 NA 4.510399 11.386271 11.889451 7.905500 11.749513 8.303919 10.111396 1.444296 11.103634 10.685283 5.172227 5.991202 2.766235 7.680321 6.505002 9.754919 11.596274 10.150371 9.169673 NA 7.648877 10.801034 6.624215 3.444309 2.144732 NA 8.180708 6.151666 3.998900 8.576163 4.375046 11.442945 9.855288 -0.555757 8.472212 NA 5.552832 12.928689 8.462507 8.904763 NA NA 7.474974 -1.555545 4.277196 4.729710 1.903732 6.459889 0.444349 11.051868 NA 3.903742 10.243588 9.410091 4.531768 7.954082 12.023505 6.351197 1.614239 3.398501 10.336849 7.761719 NA 2.444296 1.251689 12.737093 3.614227 8.907831 9.505678 10.307718 10.717519 13.644362 12.492112 8.872667 9.808441 11.743944 12.050827 7.806251 10.594371 -1.555545 6.766235 10.467714 10.8571409 12.9018157 9.2708550 15.0484242 8.4086473 1.4442960 9.2427783 7.4968745 10.1436620 4.5940528 5.4215869 8.0479331 8.8632134 NA 10.4010457 6.8579350 6.5575280 9.8758042 9.5009442 10.4194380 8.5291150 10.0400302 6.3022880 1.7662135 10.7470482 9.8473186 11.0944607 10.6254588 11.3908474 9.8867317 9.1149627 10.4393669 8.8160832 0.7662135 9.7099216 7.8536975 9.4086473 2.9037324 10.5006055 5.3868213 11.5280916 9.8489160 6.3269489 14.0912303 10.8141764 10.2464189 12.1612332 9.8679477 NA NA 9.7058138 9.6136051 9.1034106 TCGA-A7-A425 70 0 NA 447 breast stage iiic t3 n3a mx female 2012 NA yes infiltrating lobular carcinoma 12 white not hispanic or latino NA NA 2 1 2 2 6 4 3 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 1.040392e-07 15.625 6.25 6.25 34.375 37.5 9.0604457 8.8755365 11.4845443 8.1024875 8.4985668 8.6748391 10.9608582 9.3557581 11.0360010 10.6786339 11.3462457 10.4751196 1.1062813 12.6795022 2.5212769 10.6899591 6.4221539 8.1081266 9.9480759 12.6390112 0.5212518 13.6109030 6.4638023 10.2192145 10.4123112 5.2077875 1.5213021 12.9597540 10.1950377 3.5212895 7.7950825 5.6912131 1.1062813 3.1651402 9.5927493 10.3529901 9.4431280 10.7132715 9.2398200 10.6454083 5.4161033 11.4669137 14.6569362 9.2136496 10.1071837 10.7576002 9.5974345 4.6912103 3.0448487 7.3667768 11.5372247 NA 10.0151424 6.9559149 5.0911413 5.1506450 9.2415313 11.6893323 11.0568054 11.3034662 12.0617783 8.0777931 10.0295770 9.9285548 10.4304301 10.8213535 3.1062478 10.3136707 9.3494234 NA 10.4191324 7.8544421 4.1971026 5.4638023 10.5081956 9.2269193 10.4568204 7.7036814 2.8432201 9.5940896 12.3574360 12.1725630 9.8147587 10.2715753 1.4339000 1.4428000 0.4737500 -0.0302670 -0.0274540 0.9565200 0.4813100 0.4650200 -0.0305400 -0.0305400 -0.0305400 -0.0165670 -0.0165670 0.4179800 1.5045000 -0.0612860 0.4703200 0.4703200 -0.0226060 -0.0105080 -0.0066432 -0.0020784 -0.0020784 -0.0020784 0.0132130 0.0132130 0.0132130 0.4945900 -0.0115890 -0.0115890 0.0000000 0.4737500 -0.0109220 -0.0274540 0.9565200 0.9565200 0.4813100 0.4650200 0.4650200 0.4643400 0.4643400 -0.0305400 0.4785600 0.4785600 0.4785600 0.4785600 -0.0165670 -0.0165670 0.4179800 0.8479000 -0.0812060 -0.0853240 0.4703200 0.4703200 0.4844000 -0.0226060 -0.0105080 -0.0105080 -0.0181530 -0.0140900 -0.0020784 -0.0020784 -0.0128510 0.0132130 0.0132130 0.4945900 -0.0151910 0.0023581 -0.0398340 0.000 0.000 0.418 0.000 0.470 0.470 0.000 0.000 0.000 1.016 1.016 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.434 0.495 0.495 0.000 0.000 0.000 0.000 0.474 0.000 0.000 0.000 0.957 0.957 0.465 0.465 0.464 0.464 0.000 0.000 0.479 0.479 0.000 0.401 0.000 0.000 0.418 0.000 0.470 0.470 0.000 0.000 0.000 1.016 1.016 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.434 0.495 0.495 0.000 0.000 0.000 0.000 0.474 0.000 0.000 0.000 0.957 0.957 0.465 0.465 0.464 0.464 0.000 0.000 0.479 0.479 0.000 0.401 8.4281776 NA 6.6193191 11.6364933 11.6835210 8.1423864 12.8251391 8.5011835 9.7888053 5.6298112 11.6574771 11.6827307 3.9475540 3.3286354 3.6912103 7.4460999 3.8066849 10.3262246 10.9574780 10.9543508 9.4183761 8.0330397 8.5394873 10.6833635 6.7111122 9.0141416 0.5212518 NA 11.1779353 6.7692150 8.4206441 7.4431276 10.6473461 12.0780469 10.1230578 6.0211332 9.9422998 -1.4787482 7.1359965 11.8013328 10.2521817 8.8633618 -0.4787482 7.0409231 8.2042816 3.6505693 5.0131406 4.0758749 3.5656825 5.9914992 3.9475540 10.6262133 1.1062813 7.9412472 10.8355870 9.5799553 5.3414663 10.4692891 10.5829957 9.2060356 3.1062478 4.0448487 11.5813074 1.3286642 NA 0.8431799 3.7692111 12.751177 5.852204 8.058505 12.679502 9.955394 10.896598 12.639011 11.779117 8.965422 9.875536 13.339520 10.782500 7.366777 8.547810 4.165140 7.083529 10.579955 11.3951156 12.5487611 7.7135797 13.3663771 8.2644384 5.7307405 8.8533236 8.1705430 11.2245028 7.4161050 9.7061624 11.3462457 7.1249133 1.5213021 9.8398299 8.1972442 8.3142887 10.1020166 10.6268682 10.1691951 7.7404554 10.1786055 9.6930893 4.9306758 12.9362490 9.4431280 10.4352983 10.6576373 11.4774816 10.6937145 9.3083734 10.8821341 7.7476989 0.8431799 9.9494064 6.8386997 11.5372247 5.3541771 10.0151424 5.1937126 11.2763039 9.2415313 6.5212863 13.3348678 10.1006029 9.9533069 12.4384726 11.0497411 0.8431799 NA 9.2475051 9.0360010 9.9944854 TCGA-A7-A426 50 0 NA 364 breast stage iiic t3 n3a mx female 2012 NA yes infiltrating lobular carcinoma 13 white not hispanic or latino NA NA 3 1 NA NA 3 3 3 3 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 2.427581e-07 25.8064516129032 16.1290322580645 9.67741935483871 25.8064516129032 22.5806451612903 9.6736525 8.6414535 11.4923698 7.7825960 8.7550802 8.8158245 10.8798584 9.4344247 10.9783321 11.1828515 10.4078722 10.4049243 1.7345687 12.4334124 2.1495846 10.8131587 7.4894506 8.7457903 10.3298206 12.3242143 1.4715517 13.8071982 7.0921154 10.0654650 10.5909886 7.1297405 0.9569488 11.8851566 8.6751215 1.4715517 8.2489484 6.8707001 -0.8504805 4.7194573 9.7298591 9.3031526 10.1618760 11.2329137 9.0466897 10.5826644 12.5306703 11.2469744 14.5816205 8.3883514 10.5579303 10.4442214 9.8028935 5.5504790 5.7420574 7.9044883 11.9616776 -1.8504805 10.6245740 5.6172074 5.7194573 3.7345579 9.5142825 11.9166470 10.7142265 12.5351260 12.6427055 8.4361585 10.5010920 10.6885170 10.9621790 11.0126253 4.9697814 11.3686178 10.4289210 0.4715517 10.5104477 8.9919509 5.0340748 4.6414535 10.8374136 10.0572424 10.6230527 9.1524157 4.0322419 10.1754323 13.6136677 13.0902812 10.0095235 10.4977755 0.40928000 0.42688000 0.00000000 0.00000000 0.00152550 -0.00512270 0.00416320 -0.42767000 0.45309000 0.45309000 0.45309000 0.00583090 0.00583090 0.00610900 0.00610900 0.00610900 -0.00857660 -0.00857660 -0.02903800 0.00013863 0.00541390 -0.07947600 -0.38739000 0.08796900 0.01209700 0.01209700 0.01209700 0.00027728 0.00680440 0.00680440 -0.00360110 0.00000000 0.00152550 -0.00083160 -0.00512270 -0.00138580 0.00416320 -0.42767000 -0.42767000 -0.00180140 -0.00180140 -0.42702000 0.00249690 0.00249690 0.00249690 0.00249690 0.00583090 0.00583090 0.00610900 0.00610900 -0.00097017 -0.00097017 -0.00857660 0.40144000 -0.01701400 -0.02903800 0.00013863 0.00013863 -0.00443120 -0.43680000 -0.07947600 -0.38739000 0.00055459 0.01209700 0.01209700 0.00027728 0.00346870 -0.41652000 -0.41652000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.447 0.011 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.400 0.000 0.000 0.000 -0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.428 0.000 0.000 0.026 0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.447 0.011 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.400 0.000 0.000 0.000 -0.417 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.428 0.000 0.000 0.026 0.453 0.000 0.000 0.000 0.000 8.6751215 4.6090339 6.7457899 12.0530118 11.6108242 8.5409301 11.2050525 8.6766965 9.3543735 4.8775234 11.7904104 11.1764093 4.5419175 1.7345687 4.0075812 7.8237927 3.3195312 10.1726619 11.2192182 10.5024716 9.1275959 4.4533793 8.5257259 10.4796771 7.0168796 7.0979678 -0.8504805 NA 10.8301799 7.5311436 7.1857744 7.4938963 8.6643147 12.1281431 10.2476327 3.9824917 9.4516684 -0.8504805 8.3939644 12.7007681 10.2492772 8.8290808 NA 2.1495846 7.7606255 -1.8504805 4.9044889 0.4715517 5.1830220 5.0803379 4.4715257 10.2859510 2.3195312 9.5821425 10.6906972 9.4198959 6.8430882 10.1775066 11.2735603 8.5589916 3.1939925 4.9044889 11.9367890 -1.8504805 NA 1.7345687 2.7934590 12.4835966 4.8500393 8.4704010 12.4334124 10.5624351 10.4468034 12.3242143 12.0003735 9.1309466 10.2456568 12.8064165 11.3052094 7.9044883 8.4670133 0.1496496 7.7495135 10.6697281 11.2368977 12.3100236 5.4257245 13.2711293 8.4726555 6.9761494 9.4058092 6.9633816 10.5939581 7.2528887 9.0391047 10.4078722 7.6414535 1.1495846 10.1943362 8.7279732 6.6352683 10.3101023 10.4297914 10.1885196 8.0137866 9.9019813 9.9476673 6.1608274 12.3581528 10.1618760 10.7037097 10.0485798 10.8308390 10.7698204 9.5360020 10.4658822 7.9078238 -1.8504805 9.7506889 6.6926322 11.9616776 7.6233065 10.6245740 5.8290808 11.1785427 9.5142825 6.5115439 14.1849365 10.1474857 10.4143364 12.0235253 11.3067896 3.2788769 0.4715517 9.7679861 9.3350955 10.1211442 TCGA-A7-A4SA 40 0 NA 454 breast stage iib t2 n1a m0 female 2012 NA no infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 1 3 3 2 6 4 3 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.525908e-06 6.935946e-07 8.95522388059701 35.8208955223881 2.98507462686567 34.3283582089552 17.910447761194 9.7173592 9.5806119 11.6493669 8.2788114 8.3944854 9.6634204 9.8142453 9.5981744 10.1361734 10.1786804 10.7064459 10.0267537 1.7267876 13.5112811 2.9491801 9.6236194 5.8283193 8.4272223 10.7973507 12.6512239 1.7267876 13.4520068 5.6336724 9.3520529 10.3760387 4.2711044 -0.8583056 10.1779936 10.7314712 3.2292803 8.6653821 6.8353064 NA 3.7267876 9.5059546 9.1957460 9.5628329 9.6012517 9.7711766 11.7888287 4.5680868 10.4220108 14.6522752 9.2569288 10.7675288 10.5336006 10.6648918 5.8560644 0.1418251 8.4614921 11.9499798 NA 10.1800531 5.9998016 7.1916683 5.5341363 9.5743619 11.9647891 9.3897475 11.7856762 12.6620704 8.8387876 10.0843346 9.8758267 10.9535961 10.5591451 4.8697382 11.4968958 9.2079092 -0.8583056 10.5357467 9.0562052 3.4823837 7.1474441 10.4872253 9.5059546 10.6371754 9.7784447 0.1418251 7.3609884 13.0046511 12.2060575 9.8883343 9.7838717 0.01992300 0.44342000 0.01558700 0.01405100 0.01391100 -0.03080100 -0.01161100 0.00041593 -0.41481000 -0.41481000 0.43952000 0.26726000 -0.40528000 0.01153900 0.01153900 0.01153900 -0.02370300 0.01126100 -0.40628000 0.40561000 0.88486000 0.09827000 0.21699000 0.21699000 0.04471500 0.04471500 0.04471500 0.69279000 -0.41619000 0.01992300 -0.02013800 -0.40849000 0.01391100 -0.44048000 -0.43040000 0.00791750 -0.01161100 0.00041593 -0.02017600 0.00235810 0.60882000 -0.40937000 -0.40694000 -0.40694000 -0.00581400 -0.00581400 -0.40528000 0.32221000 -0.41267000 0.01153900 -0.39619000 -0.39619000 -0.02370300 0.01126100 -0.40329000 -0.40628000 0.31851000 -0.40970000 -0.01697900 -0.40760000 -0.42123000 0.21699000 -0.40108000 0.04471500 0.04471500 0.69279000 -0.03081300 -0.43669000 -0.02999400 0.267 0.000 -0.403 -0.403 -0.403 -0.403 -0.406 0.000 0.000 0.000 -0.408 -0.421 0.119 -0.401 -0.401 0.000 0.000 0.000 0.419 0.693 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.229 0.000 0.000 0.000 0.000 0.000 0.002 0.411 -0.398 0.000 -0.233 -0.233 0.267 0.000 -0.403 -0.403 -0.403 -0.403 -0.406 0.000 0.000 0.000 -0.408 -0.421 0.119 -0.401 -0.401 0.000 0.000 0.000 0.419 0.693 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.229 0.000 0.000 0.000 0.000 0.000 0.002 0.411 -0.398 0.000 -0.233 -0.233 8.6983261 -0.8583056 6.0366374 11.1358198 11.5646732 7.5260860 10.7514605 9.2097382 9.1357349 2.4637532 11.7253729 11.9998632 5.4456009 5.6496155 4.6964112 8.0029067 4.3117429 11.4424586 11.5659863 10.5738399 8.8107050 1.9491614 7.8697406 10.4777686 8.3561390 7.5469616 NA NA 10.2072362 7.7892787 6.2398524 7.8457234 7.8663337 11.4316689 9.7201928 4.7856761 9.4318390 NA 7.0784583 12.2805718 9.8782220 7.7380098 -0.8583056 2.8422548 8.3537084 5.7267822 3.6653814 -0.8583056 7.4410278 6.8565463 4.3117429 10.3591719 0.1418251 8.3167458 10.3073552 9.6809788 5.6809797 10.6426619 13.2096745 8.9198972 4.4637467 3.6653814 10.8256919 1.9491614 -0.8583056 0.7267440 1.9491614 12.2204779 6.8071565 8.3634072 13.5112811 9.8294932 10.0252271 12.6512239 13.6684415 9.1119259 10.0989220 12.5782713 10.6089160 8.4614921 9.1076042 -0.8583056 7.3609884 11.2880705 11.3915261 12.3978813 6.3609893 13.0153593 8.7192488 8.0576994 8.1446348 5.5680838 10.4873916 8.5889031 8.7002406 10.7064459 6.3706386 1.9491614 10.0547093 7.4637483 7.5258269 11.4395961 10.6180599 9.6216003 7.0244626 8.2890248 10.2877522 7.4993724 11.9623979 9.5628329 10.8265687 9.8992101 11.3733413 10.4507278 10.5950906 10.6471354 8.1641879 0.1418251 9.4966093 7.3266955 11.9499798 6.9935691 10.1800531 5.4993708 11.1648813 9.5743619 7.5125074 13.0812156 9.5899363 9.8195397 12.3541644 10.9394816 5.3706386 1.1418251 10.2385351 8.7565300 9.5774902 TCGA-A7-A4SB 56 0 NA 418 breast stage iiia t3 n1mi m0 female 2012 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 1 4 3 4 2 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 1.387189e-07 21.4285714285714 39.2857142857143 7.14285714285714 25 7.14285714285714 9.4078063 9.4756404 11.2430886 8.0375568 8.6162055 8.5448667 11.2307431 10.3140468 10.0787018 10.8024428 11.8857286 10.3442850 1.1983684 13.7467534 3.1983527 9.6402596 6.5559051 8.8511978 9.4307739 12.9058199 0.1983684 13.9728312 4.3682795 9.5180703 10.3801264 4.7833152 -0.8016316 8.6329810 9.2193329 -0.8016316 7.5292697 6.9330627 NA 4.3682795 9.0185318 10.9603196 9.4952692 10.2393275 9.9739632 11.2262589 12.3277970 12.0808049 14.1380699 8.4116275 11.3308527 10.1283510 10.9232931 6.4744766 0.7833309 8.0501022 9.5613926 -0.8016316 10.1276114 3.8422045 4.4462827 4.9532420 10.0524421 12.2558371 10.6214689 12.8361099 12.5701296 8.9125984 10.4616222 10.3055700 11.1905832 10.6387031 4.5906679 11.6572721 12.6654490 3.7833204 10.1919989 8.7605952 4.4124767 3.1052423 9.6547073 10.3912622 10.9939868 9.4872190 1.5202965 6.2644426 13.0236099 12.0155365 10.3682779 9.5981649 0.9589800 0.9733700 -0.0022168 -0.0154660 0.4780400 0.5089800 -0.0142280 -0.0245240 -0.0012473 -0.0012473 -0.0012473 -0.5066000 1.3092000 0.0157270 3.6569000 3.6569000 0.4802700 0.4802700 -0.0118870 -0.5077300 0.0000000 -0.4754300 0.3759400 0.3759400 -0.0060904 -0.0060904 -0.0060904 0.0533790 0.0171240 0.0171240 -0.0012473 -0.0154660 0.4780400 0.4780400 -1.0539000 0.4849200 -0.0142280 -0.0142280 -0.0245240 0.4882000 0.4882000 -0.0012473 -0.5022500 -0.5192600 -0.4948200 -0.4948200 -0.5019400 -0.4784900 0.0175440 -0.0120240 -1.0375000 -1.0375000 0.4802700 0.4983900 0.4983900 -0.0118870 -0.5077300 -0.5077300 0.0091705 -0.4782800 -0.4754300 0.3759400 -0.5038000 -0.0060904 -0.0060904 0.0533790 0.5089800 0.2786800 -0.4767000 -0.509 -0.509 0.000 -1.037 0.480 0.480 0.000 -0.508 0.000 0.554 -0.478 -0.475 -0.099 -0.493 -0.493 0.000 0.000 0.000 0.942 0.000 0.000 0.509 -0.198 0.000 0.000 0.000 0.000 0.478 0.478 0.485 0.485 0.000 0.000 0.488 0.488 0.000 0.000 -0.495 -0.495 0.000 0.000 -0.509 -0.509 0.000 -1.037 0.480 0.480 0.000 -0.508 0.000 0.554 -0.478 -0.475 -0.099 -0.493 -0.493 0.000 0.000 0.000 0.942 0.000 0.000 0.509 -0.198 0.000 0.000 0.000 0.000 0.478 0.478 0.485 0.485 0.000 0.000 0.488 0.488 0.000 0.000 -0.495 -0.495 0.000 0.000 7.9698424 NA 6.9665378 10.8645770 10.7486187 6.4745707 11.0935495 8.8387243 8.9252862 2.5202714 12.0584700 10.9722010 4.6246156 3.9532373 5.1756324 7.5602969 2.1983684 10.1052436 11.4265704 10.6801524 8.4415271 0.1983684 8.9862556 10.0185319 6.2207208 6.5202808 0.1983684 NA 10.0057079 7.8987924 5.2644426 6.3276353 7.6454365 11.7420784 10.7524621 1.7833309 9.2207208 1.1983684 7.9862556 11.6371448 10.7705795 7.8019793 NA 6.4929732 8.2778379 NA 5.2427473 2.3682655 2.6577772 5.9141100 2.5202714 9.9681907 4.2858165 8.5089658 10.4918245 9.9739632 5.8277098 10.4265704 11.2015194 7.0185318 2.0057233 4.1983527 9.9911433 0.7833309 NA 0.1983684 1.7833309 16.653416 7.594958 8.781436 13.746753 9.958241 10.577731 12.905820 12.550534 13.124659 10.337265 12.847609 9.890968 8.050102 8.659833 NA 7.670028 11.382608 10.3900291 11.9194521 6.8056833 13.5571353 8.4814414 4.2858165 8.4053674 8.5021337 9.6072452 5.0563321 5.7682081 11.8857286 7.9698424 NA 10.0430587 7.0687181 8.0249014 11.5340224 9.6140947 10.2074817 6.7982657 9.6991949 8.8404047 4.4078082 14.1653103 9.4952692 9.9305203 10.1720503 12.0704506 10.7051564 10.0594398 9.7258299 6.7757815 NA 8.8989139 5.9398190 9.5613926 5.8848543 10.1276114 5.3276371 11.1644979 10.0524421 6.5733927 13.3661631 9.6811609 9.1684588 12.4000174 11.0640862 -0.8016316 2.3682655 10.4651395 8.8112215 9.4580963 TCGA-A7-A4SC 62 0 NA 446 breast stage iib t3 n0 mx female 2012 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA NA 5 4 3 6 4 4 3 2 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 2.427581e-07 28.125 15.625 15.625 25 15.625 9.6227152 9.6866621 11.5613147 9.4960335 8.2188833 9.5635140 11.2424096 9.0890333 10.8033805 9.7440215 11.3331793 10.1244710 2.2048606 14.3806461 3.4527931 9.6384482 7.3897380 8.4786584 9.7116661 12.3994657 2.0122111 12.8839029 7.8414876 9.0573455 11.1963846 3.7284212 NA 8.9344835 11.2966287 5.2048645 8.6142538 6.7440211 0.7898544 4.2923253 10.2355299 10.4977594 9.2118900 10.5869463 10.6886785 11.5651611 2.0122111 9.2104873 14.6353153 8.5767481 9.5324153 11.3763523 11.2216710 6.7671052 5.8342182 8.5864056 12.2886744 NA 10.3192557 5.0875053 6.0503537 4.5971795 10.4698917 11.7464434 10.3990040 13.0499607 12.8339916 8.5132017 10.6876707 10.4357478 10.9614190 10.9467510 5.2272289 11.2756545 12.5545586 NA 10.5891068 8.6457319 3.8492988 5.7126563 10.5006317 9.4264499 10.3653645 9.4681320 2.7898336 10.7474110 15.1250760 12.8242803 10.4954576 9.4240313 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.2682580 5.7594515 7.2655588 10.6596760 11.3769776 8.3690908 12.3555620 9.7043598 8.6454826 4.5624134 11.8697544 11.8178256 4.7898231 2.2048606 4.9053028 7.8983499 3.5267950 10.4228204 11.6571039 11.6030720 8.9000909 7.4143157 7.4763258 9.7671052 7.3847717 6.2923253 NA NA 11.2870118 7.2655588 6.9191076 8.1677588 7.0628438 11.0201099 10.7474110 4.5267887 8.8140415 0.2048919 8.3159982 12.0077829 10.0250417 8.1177522 -0.7951081 7.7898251 8.4045349 1.5267700 3.5267950 0.7898544 5.3546108 7.1156555 4.6967172 9.4372837 NA 8.3520677 9.9538941 9.5885670 5.6805972 9.8817013 11.8823621 8.6745044 1.5267700 3.2048606 13.3542923 0.7898544 NA 0.7898544 2.2048606 14.424075 5.313387 8.364734 14.380646 10.365995 10.983351 12.399466 11.551930 9.155973 11.237253 13.781996 11.461956 8.586406 8.040913 1.204892 6.999278 11.246864 11.5346590 12.0102036 6.1590600 13.8637403 8.4902649 6.9327829 8.8559143 7.7047088 10.3543876 7.6142534 6.9327829 11.3331793 7.8983499 0.7898544 11.4167510 5.3546108 6.9897589 12.1460938 10.5296059 10.6714491 8.0472128 8.4480366 11.5936872 5.4527898 12.6154479 9.2118900 10.2729691 10.5502679 11.5228405 10.6200763 9.5679023 10.9972463 9.0250415 NA 10.5296002 7.9496966 12.2886744 6.4240319 10.3192557 6.3341463 11.0357740 10.4698917 7.2655588 12.8899400 9.0202460 10.5982532 13.1671261 11.0409130 2.9052931 0.2048919 9.8010524 10.4581193 10.1949667 TCGA-A7-A4SD 52 0 NA 441 breast stage iia t2 n0 m0 female 2012 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 1 1 5 5 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.075072e-06 3.467973e-07 38.0952380952381 7.14285714285714 0 30.952380952381 23.8095238095238 9.495636208 9.415920457 11.349256456 9.124661575 8.006824799 8.908683833 11.034805839 10.391548210 12.924373060 13.639981819 10.716891980 10.240138633 -1.007231569 12.324980953 1.800164779 10.575416906 6.152676269 8.167730236 10.114985369 5.058892246 -0.007231569 9.666996725 9.827275530 9.905177430 10.637111448 6.893671639 3.636659419 12.882280897 10.454283972 -1.007231569 7.380822072 8.583391588 0.992768431 6.964347800 9.743511434 11.124661446 9.057547207 9.191249504 10.293729012 10.918729767 4.992804679 5.636659419 15.303115503 8.055120259 9.774155990 10.972229677 10.771292365 3.800154423 NA 9.152675762 11.277339480 -1.007231569 8.627615592 6.806585709 7.427432697 6.806585709 9.322600820 11.649229363 9.526134167 11.336267820 12.741940672 7.926495260 10.903447240 10.767817979 10.886485217 11.429255768 5.435748591 11.915388914 6.700163638 NA 11.031380584 9.482652488 4.223159937 6.090836497 11.349256456 10.426389937 10.266017328 9.566451771 4.240734100 7.700163638 13.151808567 12.690532290 10.348155609 9.808187774 0.72091 0.18115 0.72714 0.76789 -0.61480 1.90060 1.18280 0.81569 0.28800 0.28800 0.28800 1.14050 -0.18812 0.32686 -0.13317 -0.13709 1.00280 -0.14710 0.49330 -0.24358 -0.20935 -0.16512 -0.16512 0.30551 -0.17906 1.04760 0.76386 0.78039 0.28388 0.34809 0.00000 -0.17527 -0.63870 -0.61846 -0.63775 -0.15031 0.78811 0.34123 0.30623 0.28673 -0.10974 0.20835 0.52833 0.52833 -0.26818 -0.23913 -0.83713 -0.67215 -0.56943 -0.13317 -0.13709 -0.13709 1.14070 -0.14710 -0.17337 -0.28673 -0.23510 -0.24984 -0.19438 0.69500 -0.16512 -0.15492 0.18690 -0.57734 0.76386 0.76042 -0.61519 -0.18435 -0.20051 0.039 -0.179 0.190 -0.137 0.856 -0.147 -0.284 -0.244 -0.194 -0.143 -0.143 -0.165 -0.165 0.187 0.187 -0.179 0.585 0.711 0.711 0.760 0.760 -0.647 -0.179 0.000 0.000 0.730 0.730 -0.615 -0.615 0.281 0.130 0.341 0.341 0.142 0.285 0.288 0.288 0.260 -0.268 -0.395 0.351 0.039 -0.179 0.190 -0.137 0.856 -0.147 -0.284 -0.244 -0.194 -0.143 -0.143 -0.165 -0.165 0.187 0.187 -0.179 0.585 0.711 0.711 0.760 0.760 -0.647 -0.179 0.000 0.000 0.730 0.730 -0.615 -0.615 0.281 0.130 0.341 0.341 0.142 0.285 0.288 0.288 0.260 -0.268 -0.395 0.351 7.754355744 NA 6.221623853 11.211065018 11.110447617 5.042215317 11.221322603 9.338653272 9.835044854 -1.007231569 11.814777749 11.610428086 3.947002159 NA 4.350355799 8.167730236 4.547394302 12.956152185 11.401664915 10.924650043 9.436783987 4.452233002 9.941901670 10.626707883 7.147622152 5.935318300 3.947002159 0.577730931 9.825694534 -0.007231569 8.439887801 8.984326454 3.947002159 10.468897589 10.283975234 2.693252762 11.066611333 6.727513448 6.832007676 12.028462757 8.560760420 10.374347467 NA 5.720724450 8.219216932 5.037197700 3.080265388 NA 6.278205968 4.037197700 4.037197700 11.264851013 5.958589834 10.860855358 10.006127159 10.071622445 5.850784424 10.276471657 14.273611507 7.822527494 4.452233002 4.080265388 10.144455334 2.693252762 3.314725524 1.314754522 2.693252762 12.160310 9.134912 7.468538 12.324981 10.396882 10.797339 5.058892 6.952806 9.039929 11.290867 14.012265 11.901385 9.152676 7.226424 4.636659 8.122088 10.480142 11.027260 11.778870 2.314726 13.952940 9.758505 7.397946 8.512441 8.770882 9.833047 8.042653 5.838294 10.716892 11.793907 6.734272 10.391548 5.577767 10.290976 11.912413 10.381898 10.256074 7.984326 8.085562 9.401134 7.581519 10.496506 9.057547 10.100675 9.678429 11.605443 11.415395 10.904196 10.796532 8.908684 NA 9.852999 7.078516 11.277339 10.024161 8.627616 7.296585 10.548832 9.322601 7.926495 13.531600 10.853504 10.659028 13.811586 10.806986 2.162726 3.261094 9.930178 9.479639 9.037199 TCGA-A7-A4SE 54 0 NA 644 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 5 3 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 2.219503e-06 4.855162e-07 3.75 32.5 5 38.75 20 9.635518 8.941183 10.902802 9.072727 7.761758 9.243001 8.563532 10.037731 11.459496 11.871977 10.226850 10.413391 1.552328 11.720475 3.137274 10.826100 7.280225 7.088357 8.605416 7.236001 NA 8.596699 9.207656 10.392585 11.024792 4.985264 -0.769551 10.654018 10.838169 3.622696 9.916877 8.971843 0.230326 6.252745 9.939460 11.194717 9.231784 9.840478 9.797382 10.904127 4.137266 8.359660 15.224111 8.200482 10.921247 10.632856 10.636050 5.252745 -0.769551 9.161114 9.728228 NA 10.410907 6.263799 5.359658 6.359660 8.603241 11.714696 10.122160 12.720600 12.859847 8.288368 11.446516 10.533164 11.330053 10.855629 4.587929 10.673320 9.528439 1.815329 10.415871 9.190378 4.809615 4.689808 12.356435 9.905451 10.349966 9.320489 2.037734 8.991928 13.319661 12.380758 9.853343 11.201561 2.218700 1.039600 0.642490 0.472380 -0.372450 -0.388730 0.776560 0.426740 -0.396420 -0.396420 0.782670 -0.387160 -0.374930 1.097500 0.338530 -0.363400 0.385510 -0.348360 -0.057520 -0.371320 1.163400 -0.250230 -0.250230 -0.211310 0.562940 1.464600 -0.410030 0.802860 -0.799120 0.402110 -0.389730 -0.347100 0.502030 -0.430910 -0.388730 -0.390740 -0.819740 0.431930 0.411110 0.337230 0.470490 -0.368630 0.698770 -0.079077 -0.053206 -0.138710 -0.374930 -0.376200 0.267650 0.338530 -0.367030 -0.365560 0.392630 -0.348360 -0.348360 -0.084130 -0.376620 -0.376620 -0.371780 -0.359650 -0.250230 -0.250230 -0.789920 -0.425170 -0.388060 -0.358710 0.162350 -0.295910 0.321090 -0.375 -0.375 -0.367 -0.367 0.393 0.044 0.000 -0.377 0.419 0.399 -0.360 -0.211 -0.211 0.078 -0.354 0.175 0.175 0.400 0.400 -0.347 0.401 0.126 -0.296 0.397 0.397 0.407 0.407 0.005 -0.380 -0.389 -0.389 0.359 0.359 0.415 0.415 -0.369 0.033 0.000 0.000 0.000 0.000 -0.375 -0.375 -0.367 -0.367 0.393 0.044 0.000 -0.377 0.419 0.399 -0.360 -0.211 -0.211 0.078 -0.354 0.175 0.175 0.400 0.400 -0.347 0.401 0.126 -0.296 0.397 0.397 0.407 0.407 0.005 -0.380 -0.389 -0.389 0.359 0.359 0.415 0.415 -0.369 0.033 0.000 0.000 0.000 0.000 8.199043 7.167015 6.706109 10.890372 10.749030 6.754174 11.546092 10.110159 9.027665 0.230326 14.317922 11.794664 3.037734 NA 4.359662 8.581315 3.874236 10.566883 11.788079 11.760295 8.966778 3.478299 8.639767 9.701035 6.561293 5.859734 3.552303 4.689808 10.083686 3.317839 8.966778 8.513465 9.925605 10.536968 10.648756 2.230387 9.674356 5.497162 8.706110 11.976891 8.959997 10.326433 -0.769551 3.137274 7.796430 3.037734 4.230380 -0.769551 4.137266 4.196158 6.125194 11.577998 6.113019 9.479490 11.533586 9.768565 7.380123 10.238805 13.531086 8.677460 3.230372 3.622696 9.885907 4.137266 2.930813 0.230326 3.552303 13.066670 9.023167 7.596699 11.720475 10.121401 10.710157 7.236001 12.312692 8.415252 10.743117 14.955290 12.395911 9.161114 8.236001 3.037734 7.930816 10.999801 11.6341873 11.5693912 4.0883536 14.2321799 9.0393405 8.2665500 8.8134590 7.1251944 10.3530491 7.3952831 5.1130212 10.2268499 10.9604219 2.5523033 9.9316828 10.0433559 8.6417815 11.7627323 9.3965395 10.2548235 6.2637988 9.5041719 8.6959427 5.6226932 11.0879686 9.2317845 9.9810833 10.4579923 11.7106617 12.0650449 11.1335050 10.8912636 8.5791043 NA 9.2356359 8.8153388 9.7282282 4.7849646 10.4109072 7.4446952 10.7729246 8.6032413 8.1228280 13.8845648 9.3098610 10.0648474 11.9883913 11.0170544 3.8742363 0.8153295 10.7005268 8.7753406 9.5307290 TCGA-A7-A4SF 54 0 NA 545 breast stage iia t2 n0 m0 female 2012 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 2 1 2 1 2 2 8 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 1.629947e-06 6.935946e-07 20.5882352941176 39.7058823529412 4.41176470588235 17.6470588235294 17.6470588235294 8.2966873 9.1272417 11.3690241 8.0458792 8.9931861 9.8206939 9.6816775 10.1836592 8.2551679 14.7451183 11.1408420 10.5435373 NA 15.1290385 0.7420925 7.8117716 3.9120271 7.8260209 9.6757889 12.2302732 NA 13.2666400 0.7420925 10.1287440 10.5229114 5.9515505 1.1571084 8.4285989 10.2577981 NA 9.2617346 6.2339513 -0.8429563 1.9644726 9.6479867 10.3401508 9.4250929 10.2001631 9.7439755 11.5155122 10.3075178 10.6860782 14.2595626 6.4378136 10.3793269 11.0378672 10.2386192 2.7420925 4.7420979 7.4192304 10.4014996 NA 10.9564174 3.5494474 5.7718460 6.4517568 9.1069625 11.8191365 8.9979136 10.2564836 12.5068317 8.8260209 9.8189138 9.7298360 11.1232807 10.4074342 4.6806957 10.4303486 10.9608633 NA 9.6875421 8.3568080 4.0161130 4.5146904 10.7083634 9.3081524 10.5681171 9.4700188 1.1571084 7.3617070 11.9725191 11.2442671 10.2238977 10.0435945 0.1238800 0.7209300 -0.5671700 -0.5204100 -0.4906800 0.7220600 0.2151400 0.2151400 -0.5156800 -0.4856500 0.1860100 0.5182100 0.0000000 0.0555150 -0.0408880 1.0680000 0.2193100 3.6569000 -0.5195000 0.0572260 -0.5542700 -0.4004800 3.6569000 3.6569000 -0.5977900 -0.0687970 -0.0687970 1.7412000 -0.6556600 -0.5989600 0.0342130 -0.5338900 0.0972780 -0.4906800 0.1898000 0.7788700 0.2151400 0.2151400 0.0395190 0.5374900 0.5554900 -0.5386500 -0.3327200 -0.3327200 -0.3327200 -0.3327200 0.0000000 0.0000000 0.0307320 -0.0195890 -1.1139000 -1.1302000 0.2193100 -0.3077200 -0.3077200 -0.5258300 0.0304650 0.0304650 0.5788000 0.0318590 -0.2435000 -0.4546900 -0.5354100 -0.5977900 -0.0687970 0.0094491 0.0963800 -0.5713000 -0.5713000 0.517 0.000 0.000 0.000 -0.076 -0.296 -0.520 0.000 -0.552 0.716 0.000 -0.123 0.120 -1.081 -0.535 -0.529 0.000 0.000 0.701 0.000 0.920 0.000 -0.571 0.000 0.000 -0.534 -0.534 0.000 -0.491 0.345 -0.378 0.176 0.176 0.555 0.555 -1.093 -1.093 -0.333 -0.333 -0.222 -0.222 0.517 0.000 0.000 0.000 -0.076 -0.296 -0.520 0.000 -0.552 0.716 0.000 -0.123 0.120 -1.081 -0.535 -0.529 0.000 0.000 0.701 0.000 0.920 0.000 -0.571 0.000 0.000 -0.534 -0.534 0.000 -0.491 0.345 -0.378 0.176 0.176 0.555 0.555 -1.093 -1.093 -0.333 -0.333 -0.222 -0.222 8.0549814 2.3270550 3.4050666 11.0382497 11.8131136 8.1723555 11.5234580 7.8144184 9.5154793 -0.8429563 10.6752972 12.0331231 4.1113318 2.8575830 2.4790753 8.2015300 2.9644911 9.9547973 11.9007080 10.4897319 9.2299383 NA 7.9053286 10.2708779 6.8782349 0.1571731 -0.8429563 NA 9.9236647 5.5834017 4.0640292 8.5429982 6.9120235 10.1972885 9.1627604 2.4790753 9.8619040 NA 4.3665880 11.5329898 9.0834317 7.0700254 NA 6.8575755 8.0700254 4.9644911 2.9644911 3.4050666 5.2015280 4.2015319 3.0640206 11.0492991 1.1571084 8.6247414 10.8842053 9.2864189 3.8575730 10.6757889 11.8213608 7.4563437 4.2445979 2.3270550 9.6227022 0.7420925 NA -0.8429563 0.1571731 13.068715 6.951552 8.806392 15.129039 9.650991 10.652991 12.230273 10.593327 10.136561 10.382946 12.163462 8.941771 7.419230 9.826021 2.157141 10.543537 11.134416 11.113149 13.197854 7.157136 12.955504 8.395541 5.696294 6.376304 8.732921 10.603444 7.070025 4.857578 11.140842 5.286419 1.157108 10.823804 1.964473 9.373748 8.137276 9.038250 10.593847 4.442539 9.541920 10.018223 5.951550 12.059008 9.425093 10.464337 10.644473 10.567587 9.528912 10.153609 10.363540 7.371455 NA 8.527649 8.766573 10.401500 6.223226 10.956417 5.223226 10.799639 9.106963 6.970917 12.346960 9.511385 9.152903 11.458060 11.018610 4.857578 1.964473 9.558015 9.970115 9.070025 TCGA-A7-A56D 84 0 NA 448 breast stage iia t2 n0 m0 female 2012 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 1 NA NA 2 2 2 4 2 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.670339e-06 1.28315e-06 12.8205128205128 58.1196581196581 3.41880341880342 17.0940170940171 8.54700854700855 7.4448683 7.0463186 9.2162441 4.0019283 8.8092797 7.7478794 8.3682471 9.2194788 11.6849195 12.4764758 10.5597077 9.5705144 2.0019103 12.6815516 2.4169748 10.9083145 6.5462447 7.1718503 9.8484600 10.6825774 NA 13.8545194 8.2687113 10.6030766 8.4640862 8.2339460 NA 10.0399293 12.8349467 NA 9.2275341 4.9405239 NA 5.4393306 7.1785135 8.9227741 8.0608186 8.5228710 7.6837491 8.2275341 2.0019103 9.6672608 13.9969853 2.4169748 8.8411287 8.7745143 8.6190861 4.7023639 4.8763942 5.7388894 7.5768335 NA 10.2498524 6.0316731 1.7388975 4.9715528 7.9365985 11.2040487 10.3616744 10.8982573 11.0293702 10.0000451 9.9078133 9.3462207 8.7920019 9.0390142 1.0019463 10.6872577 8.7501177 NA 10.1260462 6.9168086 -0.5829441 1.7388975 9.2577402 8.2593125 9.2545903 7.4776587 5.1448825 8.7321118 12.1599033 11.0581109 8.6625149 9.4239897 0.4934300 0.5084600 0.2010600 0.7658100 -0.6212100 0.3807200 0.1092100 0.0919310 0.0692390 0.0692390 0.0692390 0.6104500 -0.1428300 -0.4560800 0.0287630 0.0287630 0.1432500 0.1432500 0.0049969 0.7852400 -0.1326400 -0.6749000 -0.5872600 3.6569000 -0.5077400 0.4413900 0.1854500 3.6569000 -0.6255100 -0.2281000 -0.4262600 -0.6368900 -0.6212100 -0.6212100 -0.3899000 -0.3900700 0.1092100 0.0919310 0.0919310 0.7888400 -0.0383060 -0.6368600 0.1200500 0.1200500 0.1200500 -0.0293110 -0.1428300 -0.1380700 -0.5423100 0.0287630 -0.6192000 -0.6192000 0.1432500 0.1432500 0.1432500 0.0000000 0.7852400 0.7852400 -0.5382500 0.0589370 -0.6802200 -0.5872600 -0.8044300 -0.6120100 -0.1568200 0.7588700 -0.0287650 -0.2383700 -0.8103000 0.444 -0.138 -0.542 -0.542 0.143 0.143 0.000 0.785 0.000 -0.097 -0.355 -0.587 -0.587 -0.804 -0.804 -0.157 -0.157 -0.228 0.265 0.809 0.809 0.000 -0.347 0.000 0.000 0.000 0.682 -0.621 -0.621 0.056 -0.325 0.000 0.000 0.000 0.000 -0.611 0.000 0.120 0.000 -0.159 -0.159 0.444 -0.138 -0.542 -0.542 0.143 0.143 0.000 0.785 0.000 -0.097 -0.355 -0.587 -0.587 -0.804 -0.804 -0.157 -0.157 -0.228 0.265 0.809 0.809 0.000 -0.347 0.000 0.000 0.000 0.682 -0.621 -0.621 0.056 -0.325 0.000 0.000 0.000 0.000 -0.611 0.000 0.120 0.000 -0.159 -0.159 9.4736000 8.0929194 6.3238528 11.5297277 13.1612707 8.4451999 11.0159453 NA 10.8555463 NA 12.3675183 12.6951214 4.2749400 -0.5829441 -0.5829441 6.5254864 6.3117810 13.0886140 11.4348147 8.1139297 9.7388904 1.7388975 6.5667101 10.8453226 6.2749437 3.4169613 2.5868848 NA 8.5436668 -0.5829441 6.7388908 8.6790571 7.3117801 12.2365188 8.2873273 NA 10.3402899 NA 6.0316731 11.8047105 7.3238528 9.8124965 NA NA 7.1785135 2.7388975 4.9715528 NA 1.4169478 6.0463186 2.4169748 11.2710516 4.3711615 8.1584294 10.7000507 9.9483439 5.7388894 9.3388032 13.1084878 7.6884252 1.0019463 6.0019238 11.6828704 4.3711615 NA 0.4169478 3.5044297 13.241069 7.959994 6.940524 12.681552 9.792002 10.813567 10.682577 9.804980 8.761258 9.464086 12.334894 7.765691 5.738889 10.865079 4.224318 10.092919 7.994391 9.7115832 13.1183772 4.7023639 12.9354914 7.7612580 0.4169478 8.2498525 6.6553676 9.1701957 6.5968711 7.8886373 10.5597077 9.3536003 1.4169478 9.1917494 7.8515904 7.8368804 8.5228710 9.4490081 10.0662185 5.5462463 11.7914585 2.0019103 6.2996055 10.9874490 8.0608186 11.0880611 10.3689755 9.8835487 9.4225869 9.0371823 10.1491298 4.6264158 7.8845680 9.7698666 7.5202502 7.5768335 6.8681731 10.2498524 7.7656905 10.1060868 7.9365985 7.3769641 14.0881164 10.5391433 9.2640198 11.2239147 10.8416536 -0.5829441 2.7388975 8.6190861 8.3447402 8.6067868 TCGA-A7-A5ZV 62 0 NA 368 breast stage iia t2 n0 m0 female 2012 NA yes infiltrating carcinoma nos 0 black or african american not hispanic or latino NA NA 4 4 5 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4.404326e-06 1.387189e-06 12.5 20.2380952380952 5.95238095238095 31.547619047619 29.7619047619048 9.9127072 8.3390821 9.5105749 8.1524745 9.2741174 8.1620816 8.6839775 10.5592547 11.0955374 12.3489301 9.9974336 10.2689400 1.6638455 13.0801006 NA 13.1026227 5.7681684 8.4052981 11.2233992 0.3418719 0.3418719 9.5513562 8.0900955 9.8655726 10.0458063 6.3642713 2.6638228 8.6411107 11.1387536 4.8964898 9.3062436 8.5242972 NA 3.2487929 8.3808216 10.5211899 9.0967903 7.3475275 9.6513791 11.0638564 0.9268344 2.3419004 14.2972803 8.0335766 12.2435240 10.2014376 10.2367205 3.5118222 0.9268344 8.5945683 6.5898309 NA 10.1249010 3.1492594 6.1232627 4.0423467 9.2060888 11.2574088 10.0706736 10.6273050 11.8873500 9.1117405 9.5610714 9.5969314 10.2570353 9.5981115 4.1492594 11.7555307 9.2029897 NA 10.4859237 9.8810616 4.9788180 5.1998843 7.7470443 9.4903794 11.0072387 9.8936111 10.2222516 7.7597551 13.1527756 12.4438785 8.9785274 8.3808216 1.6128000 0.7488000 0.8643300 0.7883300 -0.0055375 2.6232000 -0.8488300 0.6987700 2.4757000 2.7727000 3.4336000 1.6205000 -0.0110600 0.8356900 3.5171000 0.8215700 1.7064000 -0.0171160 -0.0188820 -0.8100500 -0.0092666 -0.0490190 -0.0490190 0.7177300 0.6384700 -0.0960440 0.6961500 0.8252900 -0.8842600 0.8153200 -0.0662250 -0.8488300 -0.8413100 -0.8479500 -0.8194200 -0.8067500 -0.8654300 -0.0630320 -0.0329960 0.7769500 2.0047000 -0.8424300 0.8500800 -1.2929000 -0.0366740 0.6511200 -0.0110600 -0.0125760 -0.0131270 -0.0734570 -0.8205600 -0.8423500 1.6902000 -0.0206870 -0.0206870 0.0153080 -0.8238300 -0.0168410 -0.8285500 1.7451000 -0.0490190 -0.0490190 -0.8188400 -0.9954800 -0.0960440 -0.9160500 0.0553730 -0.8842600 -0.9396100 0.000 0.000 0.000 0.000 1.690 0.000 0.000 0.000 0.000 0.797 0.797 0.000 0.000 0.000 -0.805 0.638 0.000 -0.808 0.785 0.000 0.000 0.000 0.000 0.545 0.000 0.000 0.000 -0.835 0.000 2.623 -0.836 0.000 0.000 0.776 0.776 -0.842 3.421 0.000 0.000 0.138 0.138 0.000 0.000 0.000 0.000 1.690 0.000 0.000 0.000 0.000 0.797 0.797 0.000 0.000 0.000 -0.805 0.638 0.000 -0.808 0.785 0.000 0.000 0.000 0.000 0.545 0.000 0.000 0.000 -0.835 0.000 2.623 -0.836 0.000 0.000 0.776 0.776 -0.842 3.421 0.000 0.000 0.138 0.138 8.3780763 NA 4.3419004 11.3256090 11.8957720 6.3894636 10.9136555 8.3720458 9.1678950 0.3418719 12.9109277 13.5537059 9.6536510 NA 3.0423467 7.9529276 4.3862936 9.4865611 12.1421960 10.7608095 8.9117584 2.5118222 7.7889858 10.4891078 5.0423423 7.1428024 1.3419288 NA 9.3404933 NA 6.8176360 9.9127072 6.3862971 11.7060730 10.1379424 0.9268344 10.4247171 NA 7.4293657 11.9320220 9.3234701 13.9614923 -0.6581281 5.4079917 8.0732220 NA NA NA 2.8013242 2.1492594 4.5898294 11.8708452 3.6638342 10.5452508 10.1668615 9.7597554 7.7681678 9.6110294 11.8576026 8.7256072 2.1492594 4.8654636 10.1363187 3.2487929 8.2902700 NA 9.5205676 12.8164555 7.7555306 7.9003234 13.0801006 9.6353744 10.7000045 0.3418719 10.1191581 9.2184196 10.9816957 12.7342202 10.9920570 8.5945683 7.4763290 1.9268724 7.9748981 9.4891078 10.7581726 11.3503314 3.5898354 14.6553492 8.0799951 8.9473824 8.0107877 8.2667153 9.6024578 5.9566120 7.5610710 9.9974336 4.1492594 3.1492594 9.8013344 5.4079917 9.3171632 11.6527995 10.7315341 10.7613363 5.1492594 8.8556303 6.8810613 4.2487929 13.9626261 9.0967903 9.8664445 9.9938514 11.2536693 9.4052979 10.0063501 10.9174420 6.7681671 5.5118285 9.4320019 4.7681684 6.5898309 2.6638228 10.1249010 9.6121980 10.2191869 9.2060888 7.4556453 14.3782911 9.5317273 9.8297429 12.0312456 9.7201977 0.3418719 NA 11.3359026 9.6180272 9.9098589 TCGA-A7-A5ZW 47 0 NA 326 breast stage iia t1c n1a m0 female 2012 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 3 5 NA NA 3 3 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 22.7272727272727 50 4.54545454545455 18.1818181818182 4.54545454545455 10.2493471 9.5008646 11.1436531 8.1501895 8.5220554 9.1005759 10.2812861 9.8274105 10.6166156 12.5943840 11.1810475 10.2025354 2.6446639 13.0915971 1.8372974 10.0449311 8.0172154 8.4185071 8.8344859 12.7543056 6.9510492 12.9807695 6.1592356 9.4975253 10.5711693 5.7561693 NA 10.1954083 9.3618482 1.1592417 8.6654432 8.2551589 NA 2.6446639 9.8224370 10.0637188 10.2977624 10.9241063 9.9749382 10.7494474 9.1915560 12.3688099 14.5265948 6.9461963 9.4250841 10.3657607 10.7823846 5.0072314 3.6952923 8.5720161 11.0549614 0.8372974 11.1552844 5.2123475 6.9087685 4.2967364 10.4311645 11.9667506 10.7739445 13.0843440 12.8120796 8.6170259 11.2719348 10.9231308 11.4964105 9.9921247 4.2967364 12.1690633 11.5077415 0.8372974 10.2161433 9.0864200 3.1599520 5.0271319 10.8436326 9.9902251 9.8548109 9.7516917 4.0072314 9.2583194 13.1711607 13.1739526 9.5299220 10.1180774 0.55957000 0.55957000 -0.00124730 -0.00512270 0.00152550 -0.00429290 -0.00726170 -0.00742910 0.13865000 0.13865000 0.13865000 0.04741000 0.04741000 0.00305220 0.00305220 0.00305220 -0.00512270 -0.00626520 0.00221930 -0.00304750 -0.00304750 -0.00304750 -0.00304750 -0.00304750 0.00291330 0.00291330 0.00291330 0.00416320 -0.00346270 -0.00346270 0.00249690 -0.00512270 -0.00166290 -0.00719580 -0.00429290 -0.00429290 -0.00726170 0.00000000 -0.01009400 0.04996600 0.04996600 0.13865000 -0.00191940 -0.00191940 -0.00191940 0.00291330 0.04741000 0.04741000 0.00305220 0.00305220 0.00305220 0.00305220 -0.00512270 -0.00626520 0.00374650 -0.00761010 -0.00166290 -0.00166290 -0.00304750 -0.39964000 -0.00304750 -0.00304750 0.00097064 0.00291330 0.00291330 0.00416320 -0.01216200 0.00138680 0.00138680 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.179 -0.220 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.139 0.139 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.179 -0.220 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.139 0.139 0.000 0.000 0.000 0.000 8.4464854 -1.1626218 5.9870548 10.8596744 11.1058485 6.9864439 11.6090024 8.2844313 8.9601346 3.1592417 12.1389457 10.9299151 3.4811568 2.7442042 2.0072314 8.0970498 4.0852377 10.6510878 10.9806898 10.4114270 9.2360503 4.5652255 8.2145173 10.6219414 6.4811633 4.8373075 -0.1626218 NA 11.0923352 5.9562472 7.2967382 7.1365144 6.4071624 10.2477367 10.0917447 4.5652255 8.3431182 -1.1626218 8.6765104 13.1535881 7.8429311 8.3725822 NA 0.4222330 8.7591475 4.5652255 4.4222666 0.4222330 5.6827980 5.2296225 3.9665874 10.1552844 -1.1626218 9.0059787 10.6422443 9.7531860 4.9458324 9.3754954 12.0405016 8.3170870 1.4222868 4.2296264 11.1258843 -0.1626218 NA NA 2.4222599 12.274822 4.618667 9.015971 13.091597 10.463928 10.899015 12.754306 12.085382 8.895298 10.208539 13.266779 11.381788 8.572016 11.287229 -1.162622 7.548113 10.769890 11.098520 12.162612 5.768044 13.319542 9.536879 6.444637 9.192658 7.317087 10.274086 6.263572 7.488358 11.181047 7.444637 2.924765 10.889875 8.115756 4.481738 11.394770 10.483865 10.734774 8.479358 8.673357 11.039737 6.203628 10.802799 10.297762 10.567777 9.317087 10.953975 9.670197 10.553269 9.501754 8.349059 -1.162622 9.537027 6.876226 11.054961 5.407162 11.155284 8.542939 10.656288 10.431165 6.682797 14.697787 10.338646 10.890893 12.530576 10.994338 1.159242 -1.162622 10.247758 9.893267 9.299809 TCGA-A7-A5ZX 48 0 NA 336 breast stage iiic t2 n3a m0 female 2012 NA yes infiltrating lobular carcinoma 21 white not hispanic or latino NA NA 3 5 NA NA 3 3 3 3 2 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 6.935946e-08 26.0869565217391 17.3913043478261 0 26.0869565217391 30.4347826086957 10.0662544 9.0215161 11.2707583 7.5688841 8.5843473 9.4000277 10.6863930 10.0152546 10.3757950 11.9124147 11.2776709 10.4565776 2.1703417 13.7522630 3.1703417 10.4578374 7.8606506 8.9505019 9.8510941 12.7140698 3.1032291 13.2748741 6.3475275 9.6135497 10.5342706 3.9963074 NA 9.0249200 8.4320023 4.3256167 8.1266451 7.9870275 -1.2891219 3.2344707 10.0198111 9.6177938 9.3108161 12.0902817 10.0601845 10.8504546 9.2520000 11.7825333 14.6407396 7.7839202 10.0908231 10.0701038 10.5665504 5.7443253 4.9007268 8.5750895 12.6648269 NA 10.9732918 5.9105768 4.9776921 3.7109001 10.1626296 12.1426620 10.7228294 13.0142560 12.8491751 8.6087486 10.8498150 10.9331458 11.2515157 10.5146308 4.3833310 12.3361555 12.1680276 -0.2891219 10.2290646 8.7094936 4.8995430 3.7983616 10.1261170 10.1053660 9.9922538 9.2817078 5.0328326 10.1460526 13.6792551 13.4780532 10.0815908 10.3529550 0.4826300 0.4825100 0.0058309 -0.0063640 -0.0058140 -0.0016629 -0.0089906 -0.0089906 0.0000000 0.0000000 0.0000000 -0.0227440 -0.0167530 0.0049969 0.0049969 0.0049969 -0.0150330 -0.0150330 -0.0078863 0.0040272 0.0076392 -0.3776300 0.0171240 0.0171240 0.0125160 0.0125160 0.0125160 0.0144700 0.0045800 0.0045800 -0.0071958 0.0058309 -0.0058140 -0.0058140 -0.0016629 -0.0016629 -0.0089906 -0.0089906 -0.0089906 0.0059700 0.0038095 0.0000000 -0.0033243 -0.0033243 -0.0033243 -0.0033243 -0.3956400 0.0097276 0.0049969 0.0049969 0.0049969 0.0049969 -0.0150330 -0.0150330 0.0120970 -0.0082796 0.0040272 0.0144700 0.0076392 -0.3689500 -0.3776300 0.0171240 0.0043021 0.0125160 0.0125160 0.0144700 0.0013868 -0.0195890 -0.0195890 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 -0.378 0.000 0.000 0.000 0.000 0.000 0.483 0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 -0.378 0.000 0.000 0.000 0.000 0.000 0.483 0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.4026467 1.7109221 5.1866352 11.4801213 11.2305396 7.5200285 11.6552493 8.4198835 9.2789163 2.4113449 12.1740445 11.1490974 2.8808226 1.5182833 3.5688834 7.7715991 3.2958699 9.9179176 10.8408302 10.2878600 9.2413097 5.7332703 8.6057210 10.6654631 5.8808275 2.7983616 NA NA 10.7766560 6.0859430 7.0237865 7.2147290 8.7525623 11.4926585 10.3850956 4.7332730 9.1795272 NA 8.6252884 13.2077571 10.0601845 7.3256131 -0.2891219 -0.2891219 8.4078706 0.2958406 6.2422843 -1.2891219 2.7983616 4.7990044 2.7109001 10.1496952 2.2958699 9.5618714 10.4753602 9.6290212 5.1202939 9.9221833 11.1308634 8.5246843 2.9588241 3.6650971 11.4277228 -1.2891219 NA 2.0328414 2.5182582 11.6322087 3.7109001 8.7890540 13.7522630 10.4963558 10.4527915 12.7140698 12.2931629 8.9404913 10.1413559 13.0650149 10.7525625 8.5750895 9.0009222 0.2958406 7.9540771 10.6636446 11.1944672 12.0357870 6.5688849 13.2131111 9.2510314 6.0418212 8.8720352 7.1455318 10.4401119 6.4790883 7.6621877 11.2776709 7.8401863 5.6995877 10.6774088 8.5920174 5.3895393 11.3766833 10.2162186 10.2275883 8.1224144 9.5485312 9.8049811 4.8194281 11.5390616 9.3108161 10.5528607 9.9916740 10.9457207 10.4156715 10.1972355 9.9252224 8.2226558 NA 9.7201232 7.5406264 12.6648269 7.0772259 10.9732918 6.7277122 10.8691974 10.1626296 6.3329549 14.6478862 10.0518661 10.9041206 12.6463446 11.1664874 -0.2891219 0.7108781 9.9427244 9.6614592 9.8324369 TCGA-A7-A6VV 51 0 NA 313 breast stage iia t2 n0 m0 female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 1 2 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1761002 9.4197567 12.0119121 8.9798582 8.1373995 9.0607781 11.1405054 10.2124280 11.8529200 11.8310528 10.6199534 10.4106818 0.1638851 12.3200243 1.3863143 10.9986756 3.1639334 8.5346285 9.9761186 7.4307277 NA 9.7325307 8.0788244 9.5294837 11.4937376 8.3636135 4.8827604 10.4259264 10.7585768 1.7488905 10.0718333 7.6717357 NA 4.8269044 9.1258732 9.9745128 8.9387283 10.7344294 9.4700030 10.6972710 NA 6.2083358 16.5607355 8.4315394 9.3263326 11.0660650 10.2970834 3.3338674 6.1564067 9.0837976 12.0923362 -1.4212062 9.6068847 5.4369613 6.7539040 6.2300300 8.9989390 11.6056751 9.8713003 13.0070771 12.7487472 7.3068993 10.5609027 10.3918861 11.2115196 11.3742067 4.6664442 11.5339020 10.3187594 1.1639495 10.3818989 9.7108357 3.1044205 5.3991574 9.8516085 9.4933639 9.6130900 9.6888094 6.4493435 8.6082659 12.9310222 12.5898564 9.6671044 10.6158392 1.2481000 -0.7827700 -0.2795300 0.6434100 0.2067100 1.1464000 0.3399900 -0.0642400 -0.3178600 -0.3178600 1.0308000 0.3336700 -1.2787000 3.4930000 0.1057000 -0.6902400 -0.3480200 -0.2920500 -0.3043700 -0.1199100 0.5438500 0.4720400 -0.3360600 -0.3360600 0.0094248 0.5164700 0.4823400 0.6492800 0.1269700 0.1517100 0.0959440 -0.3072000 -0.8403400 -0.2827500 0.6710400 -0.2859600 -1.2379000 0.0366530 0.1017600 0.1299200 -0.3894000 -0.3743700 0.5795200 0.5510700 -0.2911300 -0.3076800 -0.2953200 -0.3434300 -0.7951900 0.1057000 -0.2910600 -0.3131900 0.1644500 -0.2887600 -0.3395200 -0.2993300 0.7160300 0.7317000 -0.3203000 1.0342000 -0.0675170 -0.3360600 -0.3071000 -0.4036200 0.4823400 0.5048100 1.7521000 -0.3264600 0.5364300 0.040 -0.293 -0.291 -0.291 -0.323 -0.323 -0.281 -0.137 -0.320 0.000 -0.298 0.000 -0.253 0.110 -0.307 0.000 0.000 0.127 0.127 0.440 0.440 0.534 0.536 0.000 0.000 0.356 0.636 -0.761 -0.272 0.860 -0.286 0.000 0.000 0.114 0.114 0.609 0.927 -0.299 -0.299 0.000 0.000 0.040 -0.293 -0.291 -0.291 -0.323 -0.323 -0.281 -0.137 -0.320 0.000 -0.298 0.000 -0.253 0.110 -0.307 0.000 0.000 0.127 0.127 0.440 0.440 0.534 0.536 0.000 0.000 0.356 0.636 -0.761 -0.272 0.860 -0.286 0.000 0.000 0.114 0.114 0.609 0.927 -0.299 -0.299 0.000 0.000 8.3701416 -1.4212062 6.6124012 11.1648802 11.4301421 5.8747945 12.0648080 9.0023152 8.7224001 -0.4210130 12.7815617 11.9122095 5.9540171 NA 5.0384098 8.0668190 3.4858647 10.5483652 11.4663898 11.3869373 9.4730386 -0.4210130 8.0239938 10.6574632 6.7438852 4.2514010 NA 0.1638851 11.8109499 1.1639495 7.7539047 8.6383233 7.6717357 9.9230471 11.0559780 2.7489120 10.9045653 3.9712952 7.0425032 12.9014703 8.4978419 10.0961560 NA 2.8269044 6.6450675 5.0219238 5.5562577 NA 4.9883711 2.1639495 4.6233753 10.9849179 5.3991574 11.1436046 10.6335831 9.5302635 6.2228355 9.2201273 12.0567370 8.6544577 3.5331771 4.8827604 9.7532803 4.1936850 3.8643843 -1.4212062 6.7337963 11.547667 8.479846 7.921054 12.320024 9.661128 9.931574 7.430728 11.400753 8.983056 10.330941 13.352169 11.702615 9.083798 6.573332 1.386314 7.133568 10.908775 11.258899 12.789650 2.038401 14.187204 8.838722 10.306899 8.862067 8.597179 10.567493 7.790867 6.222835 10.619953 11.764629 NA 10.860619 7.584603 10.260200 12.761140 10.649771 10.743257 7.452422 8.506757 10.100579 6.405528 10.582191 8.938728 9.808999 10.124426 12.164763 12.279960 10.654124 10.365657 9.159237 2.900915 9.627956 7.575480 12.092336 6.949666 9.606885 7.887318 10.965992 8.998939 7.868998 13.860257 10.535355 10.298795 12.603166 11.409296 3.279412 5.193689 10.130206 10.678984 8.954018 TCGA-A7-A6VW 48 0 NA 285 breast stage iia t2 n0 m0 female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 NA NA 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.2796408 8.4455111 9.8653179 6.2071061 9.3187638 7.5611352 9.1043469 9.7037605 11.9742976 11.3356163 11.0830093 9.6517072 0.4700943 11.8313535 1.4701464 11.1316220 7.6632557 7.7799957 9.2261410 9.4616626 NA 10.0336548 8.9699865 10.5726589 9.7965702 4.2427321 1.6925165 9.5181734 11.3532931 0.8851839 9.0183204 7.4663791 -1.1149724 3.9726375 8.0921926 10.4368865 8.8552840 8.0576057 9.2591310 9.6868865 0.8851839 7.6062771 13.8148528 5.9425192 10.0934065 9.4980468 9.0860768 5.9619937 1.4701464 8.0750025 9.9930492 0.4700943 9.7746821 5.7920693 4.6131014 5.0946330 8.7890602 12.0112374 12.1456568 10.7400466 11.3520195 7.6130984 10.2547755 7.3487025 10.2149746 9.5380232 2.7920640 11.2517737 7.7860448 0.4700943 10.4846263 9.0272854 5.0636928 3.7431595 11.4170470 8.8070193 10.4277265 8.0675726 1.2070807 8.6467293 12.4236097 12.5050543 10.2300290 9.4028477 0.110670 0.349230 -0.604000 0.094637 -0.620250 1.951000 -0.017254 0.089226 -0.021098 -0.021098 0.012376 0.761400 0.078582 0.095798 0.102200 0.102200 0.658460 -0.605840 -0.604580 -0.582740 0.134650 -0.531440 -0.531440 -0.531440 0.006109 -0.036129 0.013353 -0.584930 -0.517720 0.089519 -0.525120 -0.589900 -0.590970 -0.627600 -0.615080 -0.466850 -0.017254 0.054803 0.637000 0.143840 0.087390 -0.613740 -0.056307 -0.024388 -0.024388 -0.579200 -0.596240 0.098124 -0.595650 0.102200 -0.590290 -0.621110 0.983070 -0.592920 -0.592920 -0.580090 -0.582740 -0.593350 -0.594480 -0.596720 -0.531440 -0.531440 -0.624270 -0.495380 0.022725 0.147260 0.063366 -0.529300 -0.578780 0.000 0.000 0.000 0.000 0.000 -0.593 -0.605 -0.583 -0.585 -0.589 -0.589 -0.531 -0.531 0.115 0.115 0.000 0.000 0.110 0.110 0.147 -0.391 0.000 -0.560 0.000 0.000 -0.590 0.000 -0.617 -0.617 0.145 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 -0.178 0.000 0.000 0.000 0.000 0.000 -0.593 -0.605 -0.583 -0.585 -0.589 -0.589 -0.531 -0.531 0.115 0.115 0.000 0.000 0.110 0.110 0.147 -0.391 0.000 -0.560 0.000 0.000 -0.590 0.000 -0.617 -0.617 0.145 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 -0.178 9.4048146 NA 5.8509619 12.1133957 11.0102688 7.0800831 11.1458038 5.9521285 8.8459767 NA 13.7297369 11.7862752 4.2774939 -1.1149724 1.8851839 8.7890602 4.4087390 10.3998923 11.5784474 9.9424931 9.7647615 4.2774939 8.5558346 10.4911206 5.5145358 12.0958496 4.9512661 0.4700943 9.2645566 -1.1149724 8.8781165 9.1935172 9.1740443 10.2916756 9.5637784 -0.1148161 11.4731901 3.1331032 6.7369268 12.6171336 8.8795318 8.1636275 0.4700943 2.7920640 8.4204538 2.4701464 1.6925165 NA 2.3446013 2.3446013 4.8159135 11.3314862 4.3114450 10.1419766 11.2462996 9.5451742 4.0551002 9.9772746 12.2427302 8.8114742 2.4701464 3.7431595 10.7662922 2.2071120 3.4087390 -0.1148161 6.4701415 11.079477 8.952613 7.104347 11.831353 9.067573 11.544505 9.461663 8.113997 9.578569 10.335359 12.829707 10.849519 8.075003 9.361924 5.961994 7.705357 8.503564 10.481834 11.918773 3.692528 14.444492 8.651707 6.151964 8.969987 7.188959 9.076731 6.633372 7.089749 11.083009 12.518968 1.692516 9.223915 8.004119 9.324947 10.253685 9.272118 9.509974 6.890803 9.842280 3.929573 4.862456 10.408647 8.855284 10.043157 10.488805 11.416560 10.554506 11.026008 10.058231 6.743159 2.972638 9.437636 6.188959 9.993049 5.514536 9.774682 5.613098 9.831353 8.789060 7.989437 15.012749 10.953957 11.065709 11.665103 12.186817 2.207112 NA 9.660789 8.875282 8.879532 TCGA-A7-A6VX 68 0 NA 317 breast stage iia t2 n0 m0 female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 1 1 2 2 2 3 8 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.7318017 9.7790602 11.0314301 8.7448446 7.9160514 8.4846928 10.8302692 9.9198900 11.0183604 13.6086839 11.9120419 10.6221962 1.7790496 12.5761138 3.0269948 9.7470070 6.8770927 7.7215750 11.9383009 12.8748693 1.5864045 13.8557506 8.1842019 9.0426112 11.2284669 7.3937705 1.1009776 9.1410041 10.6218034 2.8665322 8.8558757 6.4933063 -0.2209504 3.8234539 10.9808779 10.7588427 8.4655607 10.2354147 10.4877131 10.6012327 2.5864045 10.8892173 15.3243415 8.0232337 9.9166919 10.1995468 10.4332488 4.8234539 3.9083422 9.6594091 10.5222116 -0.2209504 10.7829295 4.8234539 5.7790601 5.4514848 8.0851219 11.7256011 10.5505498 11.2011250 12.5906357 9.3593189 10.2888353 10.2903632 11.3850027 10.9486722 5.3489158 12.6140250 11.4109194 -0.2209504 11.0919432 9.5222117 3.9889028 5.7332567 9.8737978 9.8035073 9.8179793 10.3001700 5.3789728 8.9664123 13.0747575 12.4561192 10.0644626 9.4102374 0.2151400 1.7513000 -0.4526500 1.6363000 -0.4790200 0.4522400 -0.0031859 -0.0865180 -0.0210980 0.7042000 0.8546200 0.5355500 0.0826210 1.2353000 0.0965250 -0.0052610 1.0390000 0.6224200 -0.1475900 0.3327000 0.4099400 -0.3508800 -0.3508800 -0.3634000 -0.3148200 0.8954700 1.0420000 0.0536640 -0.3757700 0.2151400 -0.3433100 -0.4055000 -0.8475500 -0.4854800 0.0391950 0.0535210 -0.0031859 -0.0865180 0.9075400 -0.3911800 -0.3429700 0.6240600 0.7891000 0.7891000 0.8942700 -0.3046300 0.0826210 -0.3812300 -0.8605800 0.0965250 -0.4425300 -0.4576800 1.0390000 -0.4430200 -0.4430200 -1.2929000 -0.4228700 -0.4228700 0.0565130 0.0840650 -0.9148500 -0.3634000 -0.2356900 -0.3148200 0.1503900 0.4634800 -0.4599300 0.7860100 0.1285900 0.000 0.000 0.444 0.444 0.569 -0.470 -0.440 -0.423 -0.392 0.594 0.000 -0.915 -0.363 -0.969 -0.458 -0.164 0.150 0.000 0.875 0.000 0.000 0.000 0.170 -0.343 -0.343 -0.390 0.419 -0.848 -0.479 0.410 0.000 0.000 0.000 -0.343 -0.343 0.704 0.704 0.430 0.430 0.000 0.000 0.000 0.000 0.444 0.444 0.569 -0.470 -0.440 -0.423 -0.392 0.594 0.000 -0.915 -0.363 -0.969 -0.458 -0.164 0.150 0.000 0.875 0.000 0.000 0.000 0.170 -0.343 -0.343 -0.390 0.419 -0.848 -0.479 0.410 0.000 0.000 0.000 -0.343 -0.343 0.704 0.704 0.430 0.430 0.000 0.000 9.0621487 7.0364484 7.5505498 11.1385354 10.6067999 6.4826176 12.2288538 7.6787191 9.0222344 NA 11.9578807 11.8224756 4.5069827 2.7790706 4.7332567 7.2178521 3.9083422 11.8248200 11.7350733 10.5150393 9.8954043 7.2668999 8.3470163 9.8777504 5.5604215 6.6678042 NA 0.3640121 10.4915873 4.3640261 6.2466665 8.3182192 6.0551848 12.0501833 9.9521128 2.7790706 9.3191882 0.7790496 7.6708439 12.1223848 9.0030619 7.5272534 -1.2209504 7.2425844 8.4933059 3.0269948 2.5864045 1.1009776 3.9885120 4.3076325 -1.2209504 10.1116563 NA 5.6245513 10.1228012 9.3536539 2.1009776 9.3278822 12.7456559 7.1969129 3.3026261 3.3026261 10.7339836 1.9489746 NA 0.7790496 3.3026261 9.326765 7.853202 7.563695 12.576114 10.206268 11.890848 12.874869 9.527253 9.279205 11.347966 12.541442 9.168154 9.659409 9.380831 3.422919 6.685951 10.694566 10.9102742 11.6196415 7.2466656 13.8439647 8.8316284 4.4229192 8.3677751 8.2769121 9.8768423 6.2547943 6.9134866 11.9120419 10.4265187 3.0269948 10.7138569 3.9083422 8.8452840 11.0210435 9.8862773 10.0487714 7.4933055 8.0964727 11.3491532 3.5864165 11.5711978 8.4655607 10.0423294 10.0258009 12.0188080 9.7556244 10.5924407 10.4336963 8.6245502 10.7248699 9.4754888 7.9343337 10.5222116 2.2384812 10.7829295 7.8612091 10.4337276 8.0851219 7.9983258 13.6577339 9.7318015 10.6712236 12.6305165 10.2643864 -0.2209504 -1.2209504 10.4247187 9.4417287 9.4655609 TCGA-A7-A6VY 48 0 NA 266 breast stage iib t2 n1 m0 female 2013 NA yes infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 4 4 NA NA 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.05995386 8.69484364 10.82047481 7.82378247 9.21997533 9.13020939 10.12082832 9.97771152 11.67666573 12.25347510 10.25306626 10.13509925 0.05338942 10.66349593 2.05338942 11.20165861 5.98413132 8.56909382 8.53586594 5.91964280 NA 10.58834520 8.68153571 9.40339002 10.54491296 5.95224736 1.46842692 12.89036470 12.43033321 1.63835192 7.96428657 8.29020551 -0.53157308 7.20314143 9.07853352 10.40874497 8.90514297 8.92888726 9.28701348 10.39990764 0.05338942 6.06834406 14.74168063 7.85111999 8.53452039 10.14879089 9.82102662 4.49080115 0.05338942 8.04207849 11.79976827 NA 10.14262365 4.82598401 6.95627160 5.56646205 8.05151404 12.28801177 9.90410170 11.56102339 12.46030750 8.04586011 10.29458261 9.88131880 10.60638310 10.83092316 4.39917109 10.56514655 9.04113153 -0.53157308 10.66841036 9.51623700 2.89536079 5.36324819 8.86289395 9.08681693 11.41387525 8.98905014 0.05338942 6.20314046 12.29686543 12.56382842 10.59481323 9.55589417 1.01930000 0.51054000 -0.41102000 -0.48701000 -0.49246000 0.02300500 0.09536300 0.01056400 -0.51362000 -0.51362000 0.14384000 0.34096000 0.09914200 0.03411300 0.03411300 0.03411300 0.06923900 0.04301500 -0.51043000 -0.49434000 -0.02712400 -0.51135000 -0.51135000 -0.48953000 -0.00097017 -0.00097017 0.05793900 0.05480300 -0.51558000 -0.48439000 -0.13691000 -0.41102000 0.02370600 -0.47597000 -0.49913000 -0.49152000 0.05922300 0.03637000 -0.52056000 0.00000000 0.05908000 -0.51362000 0.48027000 -0.50339000 0.03214000 -0.05334100 -0.40052000 -0.51445000 -0.51506000 0.03411300 -0.50608000 -0.50608000 0.05181400 0.04457400 0.00041593 -0.49402000 -0.49944000 -0.49944000 0.01028500 0.03806500 -0.51135000 -0.51135000 0.03157700 -0.51794000 -0.46398000 0.01790900 0.01084200 -0.52389000 -0.52389000 0.000 0.000 0.000 0.000 0.000 0.000 -0.494 -0.499 0.000 0.000 0.000 -0.511 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 -0.411 -0.411 -0.492 0.000 -0.492 -0.492 0.000 0.000 0.000 0.000 0.049 0.562 0.000 0.000 -0.369 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 -0.494 -0.499 0.000 0.000 0.000 -0.511 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 -0.411 -0.411 -0.492 0.000 -0.492 -0.492 0.000 0.000 0.000 0.000 0.049 0.562 0.000 0.000 -0.369 -0.369 8.07020200 NA 5.15493150 11.31900893 11.95965816 7.15475635 11.86637337 9.01314482 8.58291573 -1.53157308 12.27809905 12.15400915 3.89469167 NA 3.05338942 8.02493740 3.96028002 11.54039645 11.73199401 11.06973794 8.84780967 2.92785854 8.86610588 10.03019660 7.69001823 3.51282104 6.67300230 -0.53157308 9.84672632 1.79035501 6.49079954 8.57564853 7.83037513 9.80184397 10.92067262 2.63835192 10.87410471 1.27578184 8.32485695 11.40451717 8.24979090 8.89679163 0.05338942 2.63835192 7.90722298 0.05338942 1.92785854 NA 6.01532584 3.05338942 5.22331828 11.21473578 1.79035501 11.22602973 11.05362869 10.15799259 5.47965741 10.10867630 13.64970014 8.71041455 4.02302464 4.96028465 10.16409474 3.71635443 4.84347138 1.46842692 6.61308958 12.18852598 8.98905014 8.23496014 10.66349593 9.60028834 11.72714463 5.91964280 9.49909844 9.08491599 10.43817764 13.61324893 11.21871967 8.04207849 8.12664305 0.05338942 6.89888431 10.29020539 11.4070921 11.5894792 4.7355926 14.0763084 8.3632491 8.4670218 8.9350177 5.3264115 10.3538723 7.8038218 6.1549315 10.2530663 10.6699428 NA 9.4942630 8.8488924 9.5113971 11.5323320 10.2497911 10.0585506 5.9278633 9.4796586 7.5505806 9.3548900 10.3777582 8.9051430 10.1623539 10.5598668 10.4645518 11.9568992 10.8663734 10.5260848 7.9742431 NA 9.7425941 6.6410590 11.7997683 9.5175993 10.1426237 7.3872945 11.3628703 8.0515140 7.6460251 12.7556387 10.0133958 9.7002526 12.1315447 11.6361631 2.2757818 0.4684269 10.0757616 9.1185855 9.3472486 TCGA-A8-A06N 66 0 NA 0 breast stage iiib t4b n0 m0 female 2009 NA NA infiltrating ductal carcinoma NA NA NA 1 1 1 NA 5 3 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 7.282743e-07 2.080784e-07 37.037037037037 18.5185185185185 7.40740740740741 22.2222222222222 14.8148148148148 10.7186842 10.1515854 11.6505031 9.6674967 9.1931811 7.3067863 10.8065168 8.6412053 8.2117243 14.1701287 6.1051521 10.5392246 1.5767640 13.4264793 4.0857900 5.1982623 6.1147376 9.1260398 8.8735133 14.1952296 1.4613190 15.0439872 -2.1234339 9.1713450 11.6426556 6.8678557 -1.1237483 7.8363357 8.2524592 -0.1235911 9.1663527 6.7123839 NA 3.1617426 9.8664377 9.9991618 9.5129585 10.6078649 9.9753528 11.8148107 1.8763303 10.8314388 13.9975030 8.2198969 12.3617845 11.2931313 12.2061302 4.1431240 -2.1234339 9.2133981 9.3403689 NA 9.7004969 11.4810029 3.6042493 2.3357691 9.6383005 11.8269808 10.4133094 7.0184406 13.0073869 7.6576936 10.6977092 10.7795265 11.3402413 11.6479264 6.0906523 11.5447756 13.1004862 NA 10.2352596 10.5329822 3.4621963 4.2338881 9.5165788 9.3661819 11.1778300 11.7380023 0.1982427 1.6836965 9.9241394 8.7076411 10.5593284 9.4631737 0.5004700 0.5089800 -0.0169790 -0.0583270 0.4978700 0.4949300 -0.0633010 -0.0997420 1.0134000 0.8881600 2.3893000 -0.5953600 -0.5893100 0.3388000 0.5470000 -0.6236800 0.4779500 0.4779500 -0.6332000 0.0253900 -0.0202750 -0.0705360 1.0321000 1.0321000 -0.0027707 -0.0027707 -0.0027707 0.8726900 0.0162860 0.4709800 -0.0212350 -0.5680300 0.4978700 0.4838900 0.4949300 0.4776700 -0.0633010 -0.0997420 -0.6500600 0.4476500 -0.0407520 -1.2165000 -0.0381700 -0.0381700 -0.0381700 0.0157270 -0.5893100 -0.5893100 0.4655300 -0.6200700 -0.6180600 -0.6180600 0.4779500 0.4779500 0.4779500 -0.6332000 0.0253900 0.0253900 -0.0202750 -0.5840200 -0.5917500 1.0321000 0.2526100 -0.0027707 -0.0027707 0.8726900 -0.0468540 0.6081000 -0.5747600 -0.595 -0.595 -0.279 -0.618 0.478 0.478 -0.633 0.000 0.000 0.606 -0.584 -0.592 0.440 0.253 0.253 0.000 0.000 0.475 0.475 0.873 0.873 0.000 -0.558 0.000 0.000 0.000 0.000 0.498 0.498 0.495 0.495 0.000 0.000 0.448 0.000 -1.217 1.085 0.000 0.000 0.000 0.000 -0.595 -0.595 -0.279 -0.618 0.478 0.478 -0.633 0.000 0.000 0.606 -0.584 -0.592 0.440 0.253 0.253 0.000 0.000 0.475 0.475 0.873 0.873 0.000 -0.558 0.000 0.000 0.000 0.000 0.498 0.498 0.495 0.495 0.000 0.000 0.448 0.000 -1.217 1.085 0.000 0.000 0.000 0.000 8.4855126 NA 2.8763303 9.5759062 11.2124219 7.7111053 10.7486239 10.3007442 8.5220463 -0.1235911 10.2250620 11.9029497 5.6178010 5.2941870 3.3998957 7.7620305 3.6312207 9.7463131 12.0976188 10.9155956 9.4822761 -0.5386810 8.2994498 9.6068040 4.9637978 -0.1235911 NA NA 10.0459457 9.6337238 2.3357691 8.7482391 5.1524593 10.5705850 10.7730446 1.5767640 8.2878449 -0.5386810 5.4910450 11.9906455 8.7635543 6.1384295 NA 8.6861020 9.1789728 NA 1.0462815 -0.1235911 2.0462466 6.3995437 0.1982427 10.2643511 NA 4.1431240 10.3828893 9.7884746 1.7832052 7.8805545 13.9303657 6.4423879 6.3721895 0.8763303 10.9095847 2.8305393 NA 1.9638070 3.6042493 13.578205 4.446190 8.784726 13.426479 9.640376 9.773423 14.195230 13.664007 8.850748 11.348517 12.658974 9.672373 9.213398 8.185810 1.046282 7.772666 11.886774 10.5036397 11.5361068 7.9111325 13.8475610 8.9186772 2.6836965 10.0453193 9.1937464 9.9904632 4.7466997 2.3999093 6.1051521 5.3275437 0.1982427 10.8296209 4.8875594 8.3490246 6.8593273 8.9618062 10.1571046 9.7056602 9.1784014 13.4468122 2.3357691 12.8544047 9.5129585 11.0015858 9.5398920 12.3201839 6.8217778 10.2211845 10.6861019 9.1605796 NA 8.4705649 3.2686440 9.3403689 2.0462466 9.7004969 -2.1234339 10.5965781 9.6383005 8.1195196 13.4058559 10.3153855 9.9070009 12.4002020 8.7513151 -1.1237483 2.1242620 10.6194852 11.1340163 10.5974330 TCGA-A8-A06O 60 0 NA 396 breast stage i t1c n0 m0 female 2009 NA no infiltrating ductal carcinoma NA NA NA 1 2 1 NA NA NA 1 1 2 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 4 0 0 0 0 0 0 0 0 1.387189e-06 2.427581e-07 40.4255319148936 17.0212765957447 0 27.6595744680851 14.8936170212766 10.7092333 10.4870362 11.7993646 9.1463637 9.3748015 8.7264137 10.6148149 9.3252040 9.9396798 13.4411664 11.0005497 10.6047722 0.4432884 13.0482839 4.3259692 9.7165381 4.4206037 8.4656933 10.1489577 12.9007062 3.4877179 12.5859111 1.2506585 9.2217394 12.2558035 6.5307887 1.0282862 9.7820617 11.1539166 3.1982112 8.7077681 6.4986083 0.7652801 4.1157491 9.7413879 10.1236848 9.5771099 10.9299090 9.8069125 11.4986078 3.0282862 11.3080919 15.0801482 8.1957561 9.7703165 11.6118408 10.9962346 5.2377396 6.1086604 8.9959943 12.3597647 -0.5566055 9.9175383 5.0726804 5.7379463 5.6232348 9.9703136 11.7752220 10.3202260 11.6370047 12.7909467 7.7054202 11.2698738 10.2439098 10.5758251 11.3127264 5.5094140 12.5696265 11.9492609 -0.5566055 10.2514851 10.7851221 3.8732718 5.3259692 10.4341384 10.0589550 10.7382332 11.8869165 3.3013096 5.8945365 12.8069126 10.8210781 10.2340810 8.5026699 0.949520 1.207400 0.227620 0.211920 0.113890 0.219450 1.563300 -0.286940 -0.597010 1.685100 3.656900 0.221450 0.221450 -0.605840 3.656900 -0.599440 -0.072675 -0.072675 -0.612010 0.235810 0.233950 -0.611620 0.584710 0.584710 0.021323 0.753950 0.753950 0.225150 -0.182950 -0.182950 -0.079343 0.214530 0.069525 0.107860 0.219450 0.219450 -1.043100 -0.286940 -0.208340 -0.199750 -0.174110 -0.618160 -0.610850 -0.610850 -0.593800 -0.611530 0.237210 0.237210 -0.599640 -0.605840 -0.599440 -0.599440 -0.072675 -0.072675 -0.072675 -0.612010 1.075700 0.224130 0.233950 -0.590190 -0.611620 0.584710 0.014888 0.021323 0.753950 0.216800 0.172720 0.241240 1.018400 0.221 0.221 -0.599 -0.599 0.000 0.000 -0.612 -0.361 0.234 -0.418 -0.589 -0.612 0.395 0.000 0.000 0.000 0.733 -0.183 1.207 0.225 0.225 0.173 0.193 -0.579 -0.579 0.209 0.209 0.114 0.114 0.219 0.219 -0.331 -0.331 -0.174 -0.174 -0.597 3.657 -0.594 -0.594 0.000 0.000 0.221 0.221 -0.599 -0.599 0.000 0.000 -0.612 -0.361 0.234 -0.418 -0.589 -0.612 0.395 0.000 0.000 0.000 0.733 -0.183 1.207 0.225 0.225 0.173 0.193 -0.579 -0.579 0.209 0.209 0.114 0.114 0.219 0.219 -0.331 -0.331 -0.174 -0.174 -0.597 3.657 -0.594 -0.594 0.000 0.000 8.6269607 NA 6.9824837 10.4496514 11.7278603 7.2142531 11.4933440 8.4379759 8.4181271 0.4432884 11.6626451 11.4648415 4.6721424 4.2246886 5.0432395 8.1333231 3.8356412 10.0763206 10.9228530 10.6536923 9.1873182 1.0282862 7.7942644 9.9160162 6.8270302 7.8779534 NA NA 10.0939284 6.4376788 5.5201425 7.7539381 5.4986083 10.8787221 10.6870944 3.9979156 9.7505261 NA 6.9786006 12.6824017 9.2090259 6.5413569 NA 8.7820619 9.2595091 -0.5566055 3.1982112 0.4432884 4.9668872 7.5568593 2.3502143 10.9528530 NA 6.6331493 10.3453235 9.9381809 4.5518482 9.1068835 12.3181146 8.4163052 4.5307887 2.7652589 11.7905314 0.7652801 NA 0.4432884 3.6527733 14.106534 6.546614 8.704245 13.048284 9.273841 11.446316 12.900706 12.557230 8.444734 10.784844 13.092469 11.970436 8.995994 9.655822 3.530782 7.839930 11.894150 10.586709 11.057805 7.949137 12.912839 8.751664 5.509414 8.916016 10.289991 9.762981 6.288816 8.512104 11.000550 6.191517 2.613249 10.639620 2.966892 8.239446 10.732480 9.882117 9.971291 10.469354 8.409110 12.336532 7.191518 12.637617 9.577110 10.768912 9.352468 11.125442 9.332829 10.775921 10.431655 8.462916 7.484985 8.696771 7.403038 12.359765 6.737946 9.917538 5.974706 9.977142 9.970314 7.844205 13.494449 10.286069 9.575182 12.753512 10.245034 3.997916 NA 10.708354 9.992147 9.491131 TCGA-A8-A06P 63 0 NA 396 breast stage iiia t1c n2a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 1 5 NA 4 3 4 1 3 4 NA NA 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 5 6 0 0 2 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.387189e-07 10 25 0 20 45 9.9681661 9.8193856 11.8189897 9.9398065 8.5071869 8.5824969 10.2814053 9.1159745 9.7233886 13.5835461 10.6943343 10.5793845 1.8620347 12.7154001 2.2099524 10.3827276 6.6505161 8.4524365 9.1773752 12.1065997 3.6879901 13.3151032 6.5674953 9.9393209 10.7418813 5.5421404 -0.5974961 9.2235647 9.3184673 2.6505118 8.1855861 7.0607997 1.4026130 5.4025892 9.7727304 9.7825078 9.7000774 11.8682819 9.8609946 11.2022744 8.8045341 11.4120668 15.3617183 8.3493918 9.7819663 11.7468839 10.8576583 3.9571810 3.7601358 9.2798722 11.0108428 NA 10.9823753 6.7245166 6.3214519 5.0319465 10.1330582 11.4139900 10.5267093 12.1516194 12.9121775 8.1790208 10.9764718 10.3761061 11.0328551 11.4722056 4.8288550 11.1392013 10.4524366 0.7244757 10.6311061 9.4727089 3.7993671 6.1507810 11.2683213 10.2605690 10.7368613 10.4524366 4.9261513 8.3348029 13.0045329 12.0799773 9.9748145 9.7109271 0.0158660 0.0158660 -0.0111980 -0.0518960 -0.0139530 0.0813220 0.0112610 -0.0564990 1.2687000 1.2687000 1.2707000 -0.0012473 -0.0627640 0.0080567 0.0080567 0.0080567 0.0049969 0.0049969 -0.0092666 -0.0940640 0.0311550 0.0589370 0.0589370 0.0589370 -0.0242510 -0.0242510 -0.0242510 0.0813220 0.0158660 0.0158660 -0.0085516 -0.0111980 -0.0139530 -0.0139530 0.0813220 0.0813220 0.0112610 -0.0564990 -0.0564990 -0.0100940 -0.0100940 -0.6881500 0.0158660 0.0158660 0.0158660 0.0158660 -0.0627640 -0.0627640 0.0080567 0.0080567 0.0080567 0.0080567 0.0049969 0.0049969 0.0049969 -0.0092666 -0.0940640 -0.0940640 0.0170120 -0.6550100 0.0589370 0.0589370 0.0143300 -0.0242510 -0.0242510 -0.0041546 -0.1253800 -0.6364200 -0.6364200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.700 -0.655 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.590 1.269 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.700 -0.655 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.590 1.269 0.000 0.000 0.000 0.000 8.4360111 NA 5.4900502 10.8233378 11.4022358 7.9278348 11.0133822 9.2486503 8.1261980 3.9875483 11.4988090 11.2314187 4.0750106 2.1030276 4.5725138 8.1624764 4.0172984 9.5408598 11.6396486 10.5902494 9.3004336 1.8620347 7.5058758 10.2071225 6.1641386 6.9533351 3.7245193 NA 11.2177711 6.3683720 7.4686770 8.0873366 8.9629209 10.1805460 10.1736648 1.8620347 8.0943316 NA 8.1133942 12.1249686 8.7754529 7.9610086 0.4026130 4.3094818 7.7841310 NA 5.2605677 -1.5972778 3.9261513 5.6521279 2.1030276 10.5507468 0.7244757 7.4686770 10.8648347 10.0319446 5.1030276 9.3251723 11.7536653 8.4082125 1.8620347 3.6505118 11.9432004 1.9875392 NA -0.5974961 1.2099524 13.4851758 5.4686778 8.3229408 12.7154001 10.6086866 10.2243619 12.1065997 12.3673801 9.0346744 11.0066779 12.3713448 9.9034298 9.2798722 8.7991929 -0.5974961 7.1904904 12.1227254 11.15622266 12.32953255 6.50062043 13.40315850 9.26909418 4.61203986 9.26445034 7.71773742 10.61894889 6.46328404 8.82570391 10.69433429 6.50587505 0.98753916 10.75048617 4.94174486 6.13091646 11.78939357 10.38237048 10.74605138 9.22255150 8.98661088 12.42625574 6.33922648 12.15100521 9.70007744 10.64903176 9.95237274 12.14784217 10.62084855 10.25511747 10.71632133 9.97291806 NA 9.60707357 7.20167502 11.01084284 6.63140700 10.98237531 8.65879666 10.53540904 10.13305819 7.26677436 13.79597847 10.41486332 9.99270712 12.83232164 10.07147295 -0.01246084 2.57250166 10.42426205 10.20913762 10.17902106 TCGA-A8-A06Q 63 0 NA 31 breast stage iiia t3 n2 m0 female 2007 NA NA infiltrating ductal carcinoma NA NA NA 1 2 1 NA NA NA 2 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 5.028561e-06 1.387189e-06 11.1702127659574 72.8723404255319 1.06382978723404 10.1063829787234 4.78723404255319 10.2583956 10.1404280 11.8884111 10.1439459 8.9622020 9.4095547 11.1358418 9.6897312 6.6242442 13.5567637 10.3725491 10.3268518 0.1403860 12.5885442 7.1460523 6.4118906 4.1404269 7.9827780 9.3626191 12.7172075 0.7253485 12.3884296 8.2515638 8.8354735 11.4004653 7.4001716 -1.8593522 9.9082649 11.5668238 2.7253922 7.9003162 7.7007608 NA 2.6639821 10.0596638 10.5818160 10.3299436 11.9576115 10.5279068 12.3311786 12.0556538 11.6918959 14.1514586 9.6623472 10.1631426 11.3112919 11.6026746 2.5327409 5.0711663 8.9550105 12.4764463 -1.8593522 10.4584058 2.6639821 4.8818946 5.6795871 10.9758863 12.1581933 10.8884111 11.4152429 12.6493988 7.9119174 10.8121901 10.1581550 10.5559057 11.3043921 5.8953147 12.3162893 10.8503733 -1.8593522 9.8413011 10.0077067 3.0497179 4.7697823 10.9473803 10.2825350 10.8291153 11.2928712 1.1404515 9.0061611 11.8056528 11.5854428 10.5750562 8.2278907 0.4056100 0.9045200 3.1128000 0.4868200 0.4978700 0.4226500 0.0984150 -0.5203000 0.4854400 1.3323000 0.4727200 0.3996100 -0.0116110 -0.0797420 0.8554100 0.3603500 -0.0400730 3.6569000 0.0000000 -0.5117700 0.4502000 0.4204900 -0.5916600 -0.5511600 0.3239800 -0.1123400 -0.1123400 3.6569000 -0.0477330 -0.0147780 -0.4453400 -0.5256300 0.4935500 -0.5193800 0.3874900 0.2687700 0.0984150 -0.5178400 0.4888700 -0.5159900 0.4706800 -1.2929000 0.9735800 -0.5223500 -0.5212500 -0.5421900 0.0041632 -0.5173300 -0.0797420 -0.1154800 -0.0096806 -1.0776000 -0.0400730 3.4125000 -0.0536110 0.0000000 -0.5487500 -0.0808070 0.4347900 -0.4777600 0.4204900 -0.5916600 -0.0642400 -0.1295300 -0.1123400 -0.5707100 -0.0142280 -0.1360000 -0.1526100 0.400 0.000 0.000 0.000 0.000 0.000 0.000 -0.531 0.450 0.407 -0.071 -0.127 -0.127 0.000 0.000 -0.112 -0.112 0.000 0.894 -0.521 -0.521 0.424 -0.124 0.453 0.008 0.455 0.455 -0.012 -0.506 0.458 0.458 0.000 0.000 0.471 0.471 0.000 0.000 0.000 -0.518 0.000 0.000 0.400 0.000 0.000 0.000 0.000 0.000 0.000 -0.531 0.450 0.407 -0.071 -0.127 -0.127 0.000 0.000 -0.112 -0.112 0.000 0.894 -0.521 -0.521 0.424 -0.124 0.453 0.008 0.455 0.455 -0.012 -0.506 0.458 0.458 0.000 0.000 0.471 0.471 0.000 0.000 0.000 -0.518 0.000 0.000 8.5988345 4.4258285 6.4847246 9.0689464 11.7912553 6.3488078 11.7426628 6.1447051 7.6946713 NA 10.6715657 11.0208820 2.8953220 3.0473115 3.1404351 9.9110919 4.9859193 9.7253905 10.8764070 10.8430336 8.9653866 7.6342832 8.0230712 9.4390633 5.3302536 3.9217886 -0.2745642 NA 10.2735702 8.8146203 2.6639821 9.1572363 6.7734228 8.5120740 10.4869417 0.9477784 8.1614080 NA 6.6161606 12.5010007 8.6551421 3.7253922 NA 2.7842946 8.9258805 NA 1.1404515 -1.8593522 3.3498748 5.5627461 0.1403860 11.1259141 NA 4.9733174 10.9348438 11.6309028 4.2278874 8.3752454 11.7166761 7.4025227 2.9984122 1.8408862 10.6573591 -0.8596140 NA 2.6639821 0.1403860 12.6960794 6.9637955 9.4891561 12.5885442 10.3679958 11.5958836 12.7172075 13.0541121 9.9576635 10.5381026 12.5548489 9.6337830 8.9550105 9.6447504 0.7253485 6.9119168 12.1925714 10.428717 12.164962 7.954209 14.026719 9.001515 3.998412 8.984349 9.207190 9.043195 4.632280 8.445350 10.372549 6.595756 -0.859614 12.130355 3.425835 8.130050 7.187552 9.323443 11.277579 8.440780 8.395457 11.401788 4.269714 12.734195 10.329944 10.548758 10.389838 11.119674 7.881895 10.789235 10.420329 9.410723 4.497983 9.972285 7.771332 12.476446 4.444210 10.458406 -0.859614 9.352924 10.975886 7.800442 14.385739 10.749838 9.472464 11.465171 10.206854 -1.859352 -1.859352 11.090255 11.128047 9.748683 TCGA-A8-A06R 69 0 NA 547 breast stage iib t2 n1a m0 female 2007 NA yes infiltrating ductal carcinoma NA NA NA 3 2 1 NA 3 2 2 2 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.28315e-06 3.81477e-07 16.3265306122449 24.4897959183673 2.04081632653061 26.530612244898 30.6122448979592 10.6262153 9.6847264 10.8056033 8.8195200 9.2614286 9.3535818 9.4939807 10.3702238 9.9464930 13.4215018 10.0211539 10.5758603 1.3391374 11.2711664 4.0863932 8.9486052 4.6192721 11.0614822 11.6334551 12.4589375 0.1167640 12.2622778 3.4386921 9.8463910 10.9326871 5.7017320 NA 10.4867310 10.1428326 1.9912452 8.7714063 7.9994132 NA 6.5597136 9.7903737 10.7007932 9.3670687 9.9459643 9.9454356 10.7200875 6.5033519 10.6066181 14.8828677 8.0300187 8.7761714 10.7145124 10.3975409 3.8172139 6.2933594 8.5938538 10.1783664 1.1167640 11.1134791 6.5148008 6.5486154 5.7216324 10.4266255 12.0985753 10.4002445 11.5376077 12.7502953 7.3455889 10.6513973 10.0034829 11.3648954 10.4133041 4.9241236 12.3382566 8.8937514 NA 10.3956069 9.0336449 0.5317682 5.6610911 8.8056033 9.5624748 10.7284098 9.9433188 4.8716564 6.7509762 12.4806312 10.5741511 9.1130084 9.2631267 -0.17208000 -0.06227100 2.25780000 0.57662000 -0.36533000 -0.55887000 3.65690000 -0.21057000 1.00840000 0.09159000 1.63460000 0.32302000 0.43772000 -0.02616700 1.09360000 0.00069327 3.65690000 0.45496000 -0.77711000 1.65940000 3.24340000 -0.42287000 -0.49282000 0.77195000 0.64928000 -0.79536000 1.01590000 2.24450000 -0.43138000 0.22022000 0.32675000 0.16415000 0.60467000 -1.13540000 -0.21837000 0.13273000 -0.00733390 -0.14361000 3.65690000 0.18784000 0.10468000 -1.18520000 -0.44627000 -0.44627000 -0.42996000 0.28850000 -0.17609000 0.41898000 -0.63309000 0.06365200 0.00069327 -0.01958900 -1.16580000 0.45496000 0.45496000 -0.26336000 -0.09221300 -0.09221300 -0.12681000 -0.08837400 -0.42287000 -0.46908000 -0.28204000 -0.53174000 -0.49527000 -0.13432000 -0.34127000 -0.28275000 -0.45732000 -0.158 -0.158 0.000 0.000 -0.329 0.126 -0.625 0.000 -0.127 0.451 0.000 -0.423 -0.423 -0.311 -0.311 -0.442 -0.442 0.000 0.000 0.480 0.480 0.000 -0.283 0.591 0.360 -0.509 -0.509 0.000 0.000 0.133 0.133 0.399 0.399 0.308 0.308 -0.843 0.875 -0.352 -0.352 0.000 0.000 -0.158 -0.158 0.000 0.000 -0.329 0.126 -0.625 0.000 -0.127 0.451 0.000 -0.423 -0.423 -0.311 -0.311 -0.442 -0.442 0.000 0.000 0.480 0.480 0.000 -0.283 0.591 0.360 -0.509 -0.509 0.000 0.000 0.133 0.133 0.399 0.399 0.308 0.308 -0.843 0.875 -0.352 -0.352 0.000 0.000 7.9912395 0.8537562 7.2077650 10.8209621 11.0373712 5.7886309 12.0524264 9.2027206 8.6520454 NA 11.8791523 11.7270261 5.2999919 0.1167640 3.3391659 8.1989194 3.5318056 11.4890911 11.0224079 9.9470213 8.7809213 6.3897888 8.1428326 9.5645422 7.7678216 3.4386921 5.1016627 NA 10.4201705 6.5762016 8.3148057 8.2252947 4.4144535 10.2772006 8.8694297 0.1167640 8.4830922 NA 7.5004746 12.0909458 9.9937986 8.1792662 NA 6.2042327 7.6815547 NA 3.0553692 NA 5.0863974 2.4444550 4.1465167 10.7265646 0.8537562 9.7135812 10.1223947 10.2090869 4.5541775 9.4845490 13.4369596 8.5965506 4.3646985 5.4625464 11.2202766 5.5204914 NA NA 7.0863963 12.812793 4.531806 8.696715 11.271166 9.452503 10.740347 12.458938 12.891351 8.903584 10.501194 12.444884 8.266517 8.593854 6.978891 4.554177 7.286695 12.055492 11.090946 13.270692 5.932687 12.247980 8.893751 5.983019 9.103560 7.628707 10.643925 6.438699 9.774982 10.021154 6.023661 6.559714 10.393670 7.921977 7.640828 10.891008 9.843556 10.571070 7.345589 8.974751 8.866081 9.054389 12.357898 9.367069 10.401016 9.186444 10.546177 9.747341 9.461806 10.386287 8.475788 NA 9.044894 6.858237 10.178366 8.676466 11.113479 8.157517 10.615952 10.426625 7.342380 14.133346 10.162985 10.149275 11.556774 10.898949 -0.468132 4.626252 10.355573 9.745520 9.536028 TCGA-A8-A06T 74 0 NA 1614 breast stage iiia t3 n1a m0 female 2007 NA no infiltrating ductal carcinoma NA NA NA 1 1 1 NA NA NA 4 1 5 4 NA NA 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.040392e-07 14.2857142857143 19.047619047619 0 33.3333333333333 33.3333333333333 11.59921810 10.39164927 11.86289391 7.52964841 9.21006346 8.94442481 10.71890134 9.32923843 8.49162465 13.19752870 10.49055399 10.44816670 0.41694780 13.51741317 4.72437742 9.75501574 4.98983838 8.18909759 6.32383840 13.34034970 3.64960396 13.93488792 2.95300443 9.97308989 11.37012586 5.13941219 0.09504672 8.74965594 10.97402862 0.09504672 7.90237451 7.01388317 NA 3.82294424 10.32534054 9.72346539 11.76135480 10.60553674 10.32173309 11.94050987 4.32383840 12.23000758 13.95746348 7.81223379 10.42649666 12.79686774 11.36837834 4.28484723 2.48733199 9.19107600 10.66748326 -1.90508835 11.39580139 4.96538258 6.14486826 4.45256908 8.86568379 11.43459153 10.45586690 10.33402160 12.36794117 8.25110269 11.01853306 10.84916408 10.68232854 10.80668680 5.01388205 11.55483564 11.24429063 NA 10.06764073 9.34176053 3.48870780 4.20354573 10.64480454 8.85989130 10.31721101 10.93146471 -0.90508835 8.89915085 11.22446384 10.05248464 10.49082170 9.52285651 0.0967970 0.1115800 0.0000000 0.0000000 -0.3415900 -0.3451500 0.0290440 -0.8069100 -0.1638300 -0.6846000 0.5374900 0.0387710 0.0387710 -0.3304000 -0.3304000 -0.3304000 -0.7903400 0.1243200 -1.2098000 0.0339720 0.0423070 0.0256710 0.0256710 0.0256710 -0.3902900 -0.3902900 -0.3902900 0.0488300 -0.3611300 -0.3611300 -0.7519300 0.0000000 -0.3415900 -0.3415900 0.0689520 0.0689520 0.0290440 0.0833420 -0.8033900 0.0408920 0.0391950 -1.2106000 0.0836040 0.0836040 -0.7782100 -0.7837800 0.0387710 0.0387710 0.0660860 -0.3304000 -0.7830200 -0.3248400 -0.7903400 0.1243200 0.1243200 -1.1784000 -0.7860600 -0.7882400 0.0423070 -0.7980300 0.0256710 0.0256710 0.0441480 -0.3902900 -0.3902900 0.0488300 0.0070826 -0.7936900 -0.7936900 0.000 0.000 -0.330 -0.330 -0.666 0.124 -1.186 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.390 -0.390 -0.361 -0.361 0.000 0.000 0.000 -0.794 0.000 -0.752 0.000 0.000 -0.342 -0.342 -0.345 0.000 -0.790 -0.790 0.000 0.000 -1.195 0.234 0.000 -0.778 -0.268 -0.268 0.000 0.000 -0.330 -0.330 -0.666 0.124 -1.186 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.390 -0.390 -0.361 -0.361 0.000 0.000 0.000 -0.794 0.000 -0.752 0.000 0.000 -0.342 -0.342 -0.345 0.000 -0.790 -0.790 0.000 0.000 -1.195 0.234 0.000 -0.778 -0.268 -0.268 9.2517349 0.9023438 6.2294456 10.8530348 11.3091872 7.2984906 11.9939046 8.8797692 9.4011955 1.2649567 11.6628571 11.0062414 2.5544415 5.5212832 3.7097318 8.6724487 2.2649567 10.8771990 11.3497532 10.7122577 10.2736847 10.2152577 8.3044732 10.0345991 6.3664831 3.6496040 -0.9050884 NA 11.1560534 7.3641469 4.8763794 8.5687257 2.7388759 10.0307853 10.2473046 3.9776646 8.4270563 NA 6.8297291 11.4769683 9.7656761 7.0049126 NA -1.9050884 9.0041629 3.2649417 2.2649567 -1.9050884 5.9776623 7.1220691 2.4169478 10.7722991 -1.9050884 5.7023500 10.9181880 10.2129875 3.9279059 9.8943015 13.4747705 8.1758374 3.8499092 3.3804247 11.8536595 2.4169478 NA 0.9023438 3.5868728 13.3717985 5.7023500 9.1950252 13.5174132 9.0250991 11.2891611 13.3403497 13.8071706 9.1864552 10.5014906 13.2809793 9.7603557 9.1910760 8.8524100 0.6799642 7.9389409 10.9590125 10.15470231 12.06485601 8.35004855 13.22039174 9.53899941 6.21396156 9.32203404 9.22365857 9.40368314 6.45257237 6.43041073 10.49055399 5.35240897 NA 10.33193100 5.23457030 7.54824934 9.54726107 9.90719714 10.34857193 9.54300707 8.69679057 12.98181192 6.55445071 11.99809295 11.76135480 9.93185913 9.93304189 11.82166374 9.11946694 10.76079985 9.99437677 8.47005930 2.48733199 8.49456482 5.57075436 10.66748326 6.06656283 11.39580139 6.64576650 9.98376304 8.86568379 7.55854393 12.87196478 10.55675510 9.99097372 12.39530090 9.56517026 4.20354573 0.09504672 10.83648681 10.21881797 9.04557566 TCGA-A8-A06U 80 1 883 NA breast stage iib t2 n1a m0 female 2008 NA no infiltrating ductal carcinoma NA NA NA 3 2 1 NA 1 2 2 1 1 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.213791e-06 3.81477e-07 25.531914893617 17.0212765957447 0 25.531914893617 31.9148936170213 9.4760866 10.1777985 11.0743819 9.7823286 9.6142344 8.4058545 10.3105377 9.2905154 9.2851289 14.0219482 11.2044380 10.5983964 -0.3623434 13.6164255 2.0971051 8.5684076 3.9595940 9.1729457 10.1666128 12.9784941 NA 14.3118351 5.0806150 9.5539157 11.4470366 6.2815258 0.2226809 10.1739176 11.7204847 -0.3623434 8.2018201 7.3065557 NA 4.0639343 9.9097169 10.0597352 10.2860279 9.5632249 9.9996142 10.3933925 0.2226809 10.7458681 14.1761019 7.2056261 9.7138180 11.0329368 11.6245790 4.4450248 3.2815202 10.3346379 10.3096537 NA 10.6267100 5.4190298 5.9322904 5.4831612 9.9311420 12.2128551 10.1444738 11.3634627 12.7347972 8.1395074 9.2615520 8.9267787 11.4064750 10.8434636 6.1999138 11.1874551 9.9924708 -0.3623434 10.8262592 8.8459046 3.0334230 4.8274939 8.4108096 9.1234996 10.6956621 10.1782828 2.0971051 5.1768294 11.7674364 10.2801734 9.7257960 8.7238067 0.1581100 0.3733100 -0.8036800 1.9873000 0.4386800 0.1120400 -0.0291750 0.3108100 0.6544300 0.0702430 0.8437600 0.2708000 -0.3579500 -0.0223320 1.9727000 0.0000000 0.0296380 0.4811300 -0.7526200 0.0782940 -0.3492700 -0.3929700 1.4774000 0.6066600 -0.1497500 -0.0847930 -0.0847930 1.3106000 -0.3740300 -0.7439800 -0.1047300 -0.7870700 0.0227250 0.0431570 -0.0608830 -0.0275350 -0.0184900 0.0114750 0.3315000 -0.8449900 -0.7578000 -0.7563300 -1.0874000 -1.2929000 0.0022193 -0.0664610 -0.3579500 -0.4190500 -0.8272500 -0.0643740 -0.2614300 -1.1940000 0.0296380 0.0323220 0.4248600 -0.7526200 -0.4031800 0.0570830 0.0583670 -0.3873900 -0.3929700 0.0668020 -1.1805000 -0.1552800 -0.0847930 1.1061000 -1.1946000 -0.4028500 -0.4040600 0.000 -0.358 0.000 0.000 0.000 0.000 -0.753 0.000 -0.401 0.927 -0.330 -0.393 0.540 -1.167 -1.167 0.000 0.000 -0.374 -0.037 1.311 1.311 -0.405 -0.403 0.000 0.000 -0.405 -0.405 0.000 0.328 0.112 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 -0.310 0.000 -0.354 -0.354 0.000 -0.358 0.000 0.000 0.000 0.000 -0.753 0.000 -0.401 0.927 -0.330 -0.393 0.540 -1.167 -1.167 0.000 0.000 -0.374 -0.037 1.311 1.311 -0.405 -0.403 0.000 0.000 -0.405 -0.405 0.000 0.328 0.112 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 -0.310 0.000 -0.354 -0.354 9.7297669 0.6376566 6.9595986 9.7937535 11.5728354 6.8803206 11.1758593 8.4390878 9.8538100 0.2226809 12.3855487 12.6171242 5.3655911 0.6376566 1.2226191 8.0764624 3.6820676 10.8604653 12.1098535 10.5650780 9.4666002 8.5141874 8.3942269 9.8682914 6.6092142 8.1903393 3.5918709 -1.3621579 9.9207588 4.5684092 6.8225453 9.4361423 6.1214859 11.2124247 10.2450007 3.8471250 8.2560558 0.6376566 6.6820648 11.7674364 8.0170489 6.8075958 0.2226809 6.4058545 8.4108096 2.3381106 1.4450380 -0.3623434 5.4578503 6.4139054 3.6376682 10.8912225 2.6376798 8.3171503 10.3566313 10.0826853 7.0342752 11.3532035 14.8326196 8.8879687 5.4705596 3.8075919 10.1047665 2.2226191 NA -0.3623434 2.7251304 14.0549556 6.0470606 8.4434144 13.6164255 9.3415740 10.8832231 12.9784941 13.0250819 8.9734626 11.0202944 12.7178217 10.4749040 10.3346379 9.0083577 0.2226809 8.6404854 11.3189088 11.163436 12.143854 6.088882 13.461285 8.476874 6.063934 8.868892 9.001805 10.074824 6.399222 7.657261 11.204438 6.295883 -1.362158 10.976407 6.080613 8.083968 10.007813 10.060261 11.116945 9.339843 8.435332 12.692190 6.580185 12.627512 10.286028 10.478448 10.223102 11.993434 8.591867 9.836115 10.521077 9.629901 9.044938 9.268556 6.985381 10.309654 6.842241 10.626710 6.088882 10.568038 9.931142 8.199913 12.700897 10.691596 10.410810 12.859786 10.130525 2.222619 6.143481 9.655871 10.307884 9.457849 TCGA-A8-A06X 77 1 943 NA breast stage iib t3 n0 m0 female 2006 NA yes infiltrating ductal carcinoma NA NA NA 3 2 4 NA 1 2 1 2 NA NA NA NA 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.196247e-06 1.560588e-06 11.2426035502959 14.2011834319527 7.10059171597633 41.4201183431953 26.0355029585799 10.1964461 9.3732769 11.7314876 9.2515724 8.5737354 9.6099558 10.0728019 9.8353585 10.0466130 13.8082861 10.7854748 10.5186184 2.6910874 12.9643502 1.9906645 8.8809172 4.4825063 7.8044337 9.8337887 12.4689169 5.3656925 14.6157623 NA 7.9272909 10.2800954 4.8486330 -1.0092629 9.7338043 11.2612402 1.3126071 7.1199361 6.5220338 NA 3.2385729 10.0560689 9.8937814 8.4377363 9.7321198 9.9390201 10.2800954 NA 13.0168304 14.5208458 7.9568408 10.1237950 11.0050221 10.2621159 3.7455385 7.4704327 9.7430335 10.1693177 -1.0092629 11.4772365 5.2760537 5.4825063 6.3035360 9.9162073 11.8449369 9.8267032 10.6195540 12.8798716 8.5961323 11.1014624 10.2526361 11.3989826 11.0916436 4.2760574 11.8024289 10.1915514 NA 10.4021638 8.6771534 3.0975097 5.0991774 9.9206509 11.4392854 9.8322172 9.6648451 0.5756028 6.4335971 11.7816122 10.6122469 10.2915773 9.4315220 0.6311400 -0.0372330 0.4461100 -0.0012623 1.4814000 0.4371400 0.4464500 0.4469600 -0.4349700 0.0073457 0.9281500 1.0567000 0.4527300 0.0144540 0.0144540 0.0126910 -0.0065200 -0.0132790 -0.9349700 3.6569000 0.4432300 -0.4511600 -0.4402800 1.7763000 0.6267700 0.4416700 -0.0460560 0.0049539 -0.0077632 -0.0077632 -0.4720600 -0.4474000 -0.4515900 -0.4617500 -0.4527700 -0.4406000 0.4379800 0.4469600 0.4224900 0.4681400 0.0227090 -0.9396100 -0.4559800 -1.2929000 -0.4303000 -0.4311700 0.4527300 -0.4168600 -0.5858000 0.0144540 -0.4260500 -0.4387600 -0.0065200 0.0483880 0.0173890 -0.4412500 -0.4476100 -0.4476100 -0.4375700 -0.5478500 -0.8804700 -0.4570500 -0.4447000 -0.4889100 -0.0460560 -0.4416800 0.3947700 -0.8743300 -0.4303000 0.650 0.379 0.000 0.000 0.000 0.000 0.000 -0.439 0.000 0.293 -0.424 -0.440 -0.440 0.000 0.000 0.627 0.000 0.000 0.792 0.000 0.000 0.000 -0.437 0.398 0.398 0.000 0.000 -0.457 -0.457 0.000 -0.441 0.439 0.439 0.782 0.000 0.000 0.000 0.000 -0.409 0.000 0.000 0.650 0.379 0.000 0.000 0.000 0.000 0.000 -0.439 0.000 0.293 -0.424 -0.440 -0.440 0.000 0.000 0.627 0.000 0.000 0.792 0.000 0.000 0.000 -0.437 0.398 0.398 0.000 0.000 -0.457 -0.457 0.000 -0.441 0.439 0.439 0.782 0.000 0.000 0.000 0.000 -0.409 0.000 0.000 9.2350166 4.7720123 3.3829715 10.5812399 13.1561880 6.6303196 11.2503961 8.2846761 8.6463801 NA 11.3952622 11.2535992 4.7720123 1.7980090 5.6200086 8.5200835 3.4500895 10.8873637 11.9147230 11.3923323 6.0459344 4.7185753 7.6200094 10.4909968 6.8793958 8.2001061 2.8975502 NA 9.6710124 2.3125781 6.0674688 8.8470783 6.5298116 9.5336266 10.5399562 1.5756028 8.9920611 NA 6.9736469 12.0669674 8.5924238 7.1043954 NA 5.8732965 8.0567417 2.3125781 2.6910874 NA 4.7720123 4.0819276 0.9906645 11.2506902 NA 5.7321199 10.7467921 10.0398207 3.2385729 8.9139802 14.0556902 8.1454711 5.9564377 2.1605653 12.3201689 2.6910874 NA -1.0092629 -1.0092629 13.168360 7.195224 9.074132 12.964350 10.991709 10.559559 12.468917 12.055227 9.096561 10.758837 12.953549 11.099177 9.743034 7.474468 NA 8.592424 13.354582 10.303536 12.166670 5.979337 13.551044 9.296715 4.772012 9.125079 8.349590 9.880826 5.810831 6.552895 10.785475 5.979337 1.990664 10.232040 4.605364 8.294981 10.236206 9.887742 9.900546 7.421105 8.441864 9.171805 6.140400 11.078560 8.437736 10.244500 9.829069 12.829167 9.536583 10.937559 10.015792 9.827492 1.798009 9.707952 5.545243 10.169318 4.990651 11.477236 6.861017 10.329389 9.916207 7.778556 13.479309 10.969363 9.866402 11.530539 10.487507 1.312607 NA 10.487007 9.885471 9.064794 TCGA-A8-A06Y 66 0 NA 791 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 1 1 2 NA 2 2 4 1 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.080784e-07 22.2222222222222 18.5185185185185 3.7037037037037 33.3333333333333 22.2222222222222 9.4577469 10.0889733 11.0429926 9.0455388 8.8651174 9.4946550 9.5915381 9.8886279 9.8116056 14.6339597 10.7823913 10.6761283 2.5354807 13.1600155 3.3719770 8.3280389 7.8022675 8.4040831 11.6357679 13.0242537 1.3130717 14.3911283 6.1118305 9.6671618 11.0062852 6.6046437 -0.2719489 6.9326978 10.9008662 2.0500489 6.8208835 6.5610160 NA 4.0135248 9.2369114 10.3773823 10.3974542 10.2817555 9.9228830 11.2655873 1.5355056 11.9409265 13.8155890 7.5774689 8.9569450 11.4443026 11.2349296 4.1543888 6.7834082 9.0713119 11.6094314 -0.2719489 10.4679068 2.3131007 3.5861042 4.1543888 9.9689174 11.4473011 10.4255281 11.4417275 12.6481068 9.2269754 9.9689174 9.9134661 11.1077753 9.9271851 4.2516888 11.9078798 11.2563361 1.0500489 9.9837449 9.0612815 3.3136957 2.5354807 11.3674669 10.4560466 10.2413603 9.9742729 1.8980535 7.2199797 12.3716442 9.2038596 10.2841532 8.9351406 1.620800 1.643500 0.098997 0.098997 -0.282510 0.107890 -0.255640 -0.255640 0.391810 0.391810 0.376440 -0.050100 -0.050100 0.000000 0.000000 0.000000 0.117410 0.088982 -0.281560 0.091300 -0.854160 0.096670 0.096670 0.096670 0.078727 0.078727 0.078727 0.616970 -0.858920 -0.865540 -0.360100 0.098997 -0.282510 -0.290000 0.092025 0.086984 -0.255640 -0.255640 -0.258660 0.105700 0.105700 0.391810 0.077142 -1.292900 -0.867270 0.094201 -0.050100 -0.050100 0.000000 0.000000 0.000000 0.000000 0.117410 0.088982 0.118290 -0.281560 0.091300 0.091300 -0.854160 0.359530 0.096670 0.096670 -0.869470 0.078727 0.078727 0.616970 0.104970 -0.858600 -0.875000 0.000 0.000 0.000 0.000 0.000 0.000 -0.282 0.000 -0.854 0.360 0.360 0.000 0.000 -0.869 -0.869 0.000 0.000 0.762 1.621 0.617 0.617 0.105 -0.859 -0.351 -0.351 0.000 0.000 -0.283 -0.283 0.000 0.000 -0.256 -0.256 0.106 0.106 0.392 0.392 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 -0.282 0.000 -0.854 0.360 0.360 0.000 0.000 -0.869 -0.869 0.000 0.000 0.762 1.621 0.617 0.617 0.105 -0.859 -0.351 -0.351 0.000 0.000 -0.283 -0.283 0.000 0.000 -0.256 -0.256 0.106 0.106 0.392 0.392 0.000 0.000 -0.107 -0.107 7.4594456 4.4560439 6.8522473 10.3187132 11.4754800 6.5803128 11.6662355 8.0264410 8.6802266 NA 9.5915381 11.2478631 2.8155959 6.3791773 0.7281382 8.7168109 1.5355056 8.4929976 11.6466168 11.1803674 9.5306426 9.0238952 7.6764931 10.0724221 5.8778743 6.6168693 NA NA 10.9819736 4.4560439 5.8261595 7.9130013 5.6469892 10.3068055 11.1324695 2.3131007 8.2595074 2.9760520 7.9105204 11.7972402 9.0889732 8.2119418 NA 6.4076060 8.6410156 3.6350114 3.5354807 NA 1.3130717 3.6837189 NA 11.3024832 NA 8.6183903 10.6042594 10.2274738 3.0500489 8.6794108 12.4078262 7.1161433 3.4830160 -0.2719489 11.8699140 3.7281273 NA 3.6823261 0.7281382 13.051844 6.522542 8.890518 13.160015 10.475060 11.821048 13.024254 12.133534 8.948504 11.087327 13.770341 11.618010 9.071312 9.225978 -1.271949 6.903052 11.788991 10.7025408 11.7182301 7.4763193 13.0866379 8.3017733 3.1875619 8.6632912 7.8261582 10.1285414 2.8980535 7.4560463 10.7823913 4.6107709 -1.2719489 11.4676958 6.8676778 7.2651893 10.9984215 10.5241658 11.3015367 9.1834533 7.8340349 13.9793497 2.3131007 11.5990726 10.3974542 10.6484790 10.1026223 11.4047445 9.6888521 9.7982471 10.7459785 9.1139885 NA 9.0359417 5.2038589 11.6094314 0.3131297 10.4679068 4.4005516 10.4969308 9.9689174 6.9855141 13.5107661 9.4813429 10.6570146 12.6899376 9.9098995 1.0500489 -0.2719489 9.5665421 10.5645711 10.3805231 TCGA-A8-A06Z 84 0 NA 31 breast stage iib t3 n0 m0 female 2007 NA NA infiltrating ductal carcinoma NA NA NA 1 1 1 NA 2 2 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.31783e-06 4.508365e-07 11.5384615384615 13.4615384615385 1.92307692307692 46.1538461538462 26.9230769230769 11.05805980 10.41074993 12.19303678 8.90923367 9.16744600 8.79786770 10.86817898 9.35100590 8.96806655 14.20672738 11.40658285 10.48962823 1.47840238 13.38300140 3.37652655 9.89048956 5.48657602 7.65196439 9.94674738 13.25718748 1.01899018 12.83084576 1.34090403 10.30319202 11.60111135 7.74859004 0.34084708 8.24417686 10.93167161 1.34090403 7.51881522 6.72632853 NA 4.58882255 10.03403588 10.62166821 5.43682146 10.55521663 9.70809375 11.41717863 -0.39611852 11.27576776 14.30111665 8.69463543 10.23783531 7.35212466 11.39658664 3.30436501 7.25976115 9.32901413 9.84710591 0.01891898 10.81338520 10.25139033 5.18889540 5.12749297 10.20570260 11.58097324 10.49698057 10.87617281 12.48159943 8.55618759 10.51906427 10.10941267 10.58025734 11.76148936 5.45359659 12.66715841 10.59521747 NA 10.34061567 9.88663428 2.41129065 4.39400645 7.89395067 9.52180123 10.89010457 11.08303847 0.34084708 9.07289523 11.22796575 9.60580913 10.01402982 8.50479873 0.583400 0.589190 -0.573030 0.538010 2.482800 0.597100 -0.580880 -0.567140 -0.952750 -0.952750 1.637400 0.041741 0.034966 -0.314820 0.593860 1.755000 0.028763 0.812980 -0.565250 -0.489630 -0.538040 -0.509290 0.583990 0.583990 -0.533680 0.010146 0.010146 0.658850 0.583400 0.583400 -0.545490 -0.577430 -0.076278 -0.563760 0.577010 0.577010 -0.563060 -0.567140 -0.603220 0.558330 0.037641 -1.164900 -0.546330 -0.546330 -0.543000 -0.578320 0.034966 0.052383 -0.314820 -0.596240 -0.571820 0.322050 0.028763 -0.339410 -0.339410 -0.565250 -0.489630 -0.505400 -0.538040 -0.552970 -1.292900 0.583990 0.218830 -0.533680 0.010146 0.047410 0.616790 -0.342970 -0.339720 0.000 0.000 -0.572 -0.572 0.000 0.000 -0.565 -0.490 -0.538 0.625 0.079 -1.293 0.584 0.272 -0.061 0.000 0.000 0.583 0.583 0.000 0.000 0.000 -0.343 -0.541 -0.541 -0.563 -0.088 0.000 -0.558 0.577 0.577 -0.581 -0.581 0.521 0.000 0.493 1.637 -0.546 -0.546 0.000 0.000 0.000 0.000 -0.572 -0.572 0.000 0.000 -0.565 -0.490 -0.538 0.625 0.079 -1.293 0.584 0.272 -0.061 0.000 0.000 0.583 0.583 0.000 0.000 0.000 -0.343 -0.541 -0.541 -0.563 -0.088 0.000 -0.558 0.577 0.577 -0.581 -0.581 0.521 0.000 0.493 1.637 -0.546 -0.546 0.000 0.000 7.92736198 0.01891898 4.46191485 10.14470565 11.77176812 7.23520625 12.33433125 8.11012726 9.54437758 0.82635527 11.90618997 12.48216483 8.44837611 6.18387552 2.18890727 4.44523672 2.97317041 10.73450243 11.53319027 10.75431382 9.11436650 -1.98108102 8.54937577 10.32787719 5.47017891 3.74689317 2.01895458 NA 10.39943047 6.84869179 3.51082271 9.04133718 4.51082271 11.18041780 10.49975960 1.82631459 8.73149622 -1.98108102 4.37651961 12.28407159 9.28575591 7.43259702 -0.98108102 8.38091296 8.94155386 4.88933238 1.92584755 -0.98108102 0.01891898 5.87899993 -0.98108102 10.90714184 NA 10.05857383 9.88779194 9.66507809 3.18889145 9.15211166 11.33326936 7.43471078 2.01895458 1.92584755 13.11007413 3.06336488 NA 0.60397641 3.01897238 14.791498 5.691395 10.790046 13.383001 9.765903 10.974801 13.257187 13.944014 9.620740 10.444710 12.351985 9.353801 9.329014 8.978247 -0.981081 7.801968 11.156601 10.1225850 11.6546875 7.6610213 14.1151259 9.4325972 1.4784024 8.3820092 9.6015818 9.5880986 5.0850592 3.6914002 11.4065829 6.0904322 2.2669064 10.4652773 5.1988791 7.6300494 8.5503509 9.5459576 10.4169113 8.3588195 9.2519898 12.5450406 1.6039289 11.7368835 5.4368215 9.8569914 9.7888072 11.6560470 9.1288001 10.7241698 10.4517722 9.1540373 NA 9.0035873 6.4241108 9.8471059 0.8263553 10.8133852 4.2284262 10.2585679 10.2057026 7.8664963 14.1031134 11.1720463 9.3089883 12.8145525 9.1229129 -0.3961185 0.8263553 10.8987441 10.3315687 9.2435741 TCGA-A8-A075 42 0 NA 518 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 3 2 4 2 6 1 2 2 6 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.733986e-06 5.548757e-07 7.57575757575758 39.3939393939394 1.51515151515152 31.8181818181818 19.6969696969697 10.5110651 9.9975044 11.6331802 9.7076042 8.7394205 9.7388153 10.3559078 9.9694008 10.3440173 12.7091499 10.1285068 10.7925902 3.2206859 12.2173282 3.1641105 9.0661818 3.4744490 8.9663015 7.5863414 13.1808051 1.9796961 13.5192391 7.0438136 9.0788641 12.2694930 7.5174316 1.5202462 8.7586570 10.1261945 3.2751412 8.6248506 6.8689805 NA 6.7776393 10.6258332 10.2659264 9.6559614 9.7592539 9.7987015 11.0243262 10.1248053 10.4413491 14.7320643 9.1749506 9.8909394 11.0993322 10.7125449 3.2206859 1.6901936 9.3146680 10.1997322 NA 11.2332089 5.4150691 6.6339949 5.9211316 10.4740847 11.5917144 10.6339942 11.3300202 12.9237302 7.7466641 10.4120357 9.7649132 10.8617709 11.1070918 4.4271435 12.3299197 9.1595929 NA 10.5213083 10.1326599 3.3296690 5.6598047 8.6248506 9.6090404 9.9007132 10.7041975 0.1052758 10.3097857 12.1280447 12.3176096 9.8257438 8.7538716 -0.0049844 1.2027000 0.3375500 0.3056900 0.3590400 1.0498000 0.3356300 0.3301100 -0.4889000 -0.4889000 2.1150000 -0.4764900 0.3534900 0.3442100 0.3664100 0.3664100 -0.4922500 0.7385300 -0.4500700 0.1873700 -0.0280810 -0.4360700 -0.4360700 -0.0089906 -0.3917400 0.3841900 0.4051100 0.4056100 -0.4559700 -0.4692200 -0.0789430 -0.0496950 0.3521800 -0.0557690 -0.9248800 -0.0770430 0.3356300 0.3301100 -0.5081500 0.3416100 -0.4808100 -0.4889000 -0.4553300 -0.4553300 -0.4553300 0.0840650 0.3386900 0.3473000 -0.4745900 0.3664100 0.3210900 -0.5018300 -0.4712000 -0.0804860 -0.0406160 0.3972800 0.5967400 0.6309800 -0.0280810 -0.4295300 -0.4360700 -0.4360700 -0.4830200 -0.3917400 0.4051100 -0.0377620 0.1604000 0.4424000 -0.4383200 0.353 0.353 0.321 0.321 0.000 0.000 0.000 0.249 0.000 -0.055 -0.455 -0.368 0.000 0.308 -0.175 -0.334 0.000 -0.421 1.203 0.361 0.361 0.140 -0.438 0.328 0.000 0.000 0.000 0.238 -0.436 -0.304 -0.304 0.330 0.330 -0.145 -0.487 -0.489 1.282 -0.449 0.000 0.168 -0.135 0.353 0.353 0.321 0.321 0.000 0.000 0.000 0.249 0.000 -0.055 -0.455 -0.368 0.000 0.308 -0.175 -0.334 0.000 -0.421 1.203 0.361 0.361 0.140 -0.438 0.328 0.000 0.000 0.000 0.238 -0.436 -0.304 -0.304 0.330 0.330 -0.145 -0.487 -0.489 1.282 -0.449 0.000 0.168 -0.135 8.0398885 NA 5.4744490 10.9039564 11.5945608 6.9826320 10.8297284 8.9601972 8.7150089 2.3276011 11.6014026 11.1931304 3.0438169 0.8422146 3.2751412 8.0805847 2.6901712 10.9603426 12.0540684 10.4013661 8.7987015 0.5202462 7.5509191 9.7699581 7.3594562 4.4975293 4.3016096 NA 10.7177760 6.3720014 6.6235392 9.4524667 5.5863414 10.6471533 10.2722145 1.3276299 8.9444184 NA 6.6391931 12.0507803 8.3813392 9.5646462 -1.4795526 3.9796870 8.3906170 1.9796961 3.6901824 NA 5.8331355 6.4686192 2.3276011 12.1917931 1.5202462 5.6495350 10.6212428 10.0666643 4.8601037 9.7975395 13.5261397 8.4583615 6.1201653 4.4271435 9.3547232 3.3782342 -1.4795526 1.5202462 2.9796778 12.541584 5.903957 9.067147 12.217328 9.963714 11.434076 13.180805 11.405948 9.472826 10.307338 12.348389 10.743047 9.314668 10.141846 1.327630 7.545392 11.054798 11.4435796 12.9217983 3.2762138 12.9956049 8.6248506 6.0200977 8.7681797 8.3308237 10.6938980 7.1312767 8.9465168 10.1285068 7.1238783 -0.4797538 11.4921548 5.6287765 8.2300767 10.4480301 10.3971526 11.5851632 9.4322431 9.2566541 9.5775669 9.0786728 10.6988297 9.6559614 10.5223639 10.2655062 10.4454356 9.8843867 10.4323929 10.8841130 9.5598566 0.5202462 9.4442331 7.5060941 10.1997322 8.8931170 11.2332089 8.0181039 10.2460444 10.4740847 7.8867928 13.6325694 10.1482418 10.4594640 12.2774337 10.7714385 2.1052087 1.4575943 10.0111030 11.2052198 9.9412649 TCGA-A8-A076 66 0 NA 1642 breast stage iia t2 n0 m0 female 2006 NA no infiltrating ductal carcinoma NA NA NA 3 2 1 NA 5 3 2 2 6 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-06 2.427581e-07 31.9148936170213 14.8936170212766 4.25531914893617 23.4042553191489 25.531914893617 9.7696837 9.9081305 11.2353472 9.7173443 8.7642367 9.6940954 9.2640496 10.3986159 9.1832376 14.7576482 10.5913009 11.0589206 2.1653010 15.7722221 3.3028162 8.8629782 5.3245154 8.4370900 7.7741248 12.8797902 2.1653010 12.9798448 0.5803385 8.9271151 11.0831850 7.1441218 0.5803385 9.0568726 11.3121814 2.5803626 7.0817923 6.8244789 NA 4.4678794 10.1456457 10.8666800 9.2213213 10.0821904 10.3442295 11.3590875 2.5803626 10.1023462 14.7678445 7.9222680 9.6043848 10.8050785 10.4902463 3.4678794 3.4678794 8.7280671 10.8084504 1.5803385 11.0064083 5.3773667 6.6635666 5.8950505 10.1082211 11.8597317 9.4107100 11.9616799 12.7503409 7.7280668 10.5051658 9.8262957 11.4772911 10.5374553 5.2918466 11.6518156 9.6038303 -1.7417826 10.2449782 9.3298876 3.5017958 6.9657843 10.4751710 9.4189270 10.0928963 10.5879412 1.5803385 9.6170764 12.5856269 10.7915115 10.4135596 9.7452602 0.69858000 0.00666540 0.00138680 -0.02315500 0.02496900 0.05922300 0.36264000 -0.35704000 0.53907000 0.53907000 1.69300000 -0.37076000 -0.34733000 0.00013863 0.00013863 0.00013863 0.36149000 0.36313000 -0.73573000 0.36559000 -0.35768000 -0.73389000 3.65690000 3.65690000 -0.12875000 -0.12875000 -0.13678000 2.56620000 -0.73705000 -0.02972100 0.00000000 -0.00013862 0.02496900 0.02496900 -0.69178000 -0.30780000 0.36264000 -1.10330000 -0.35704000 0.42552000 -0.29627000 -0.72367000 0.00638710 -0.73652000 0.01377200 0.01377200 -0.34733000 -0.34733000 0.00013863 0.00013863 0.00013863 0.00013863 0.36149000 0.40094000 0.36264000 -0.73573000 0.36559000 0.36559000 -0.35008000 0.01195800 -0.73389000 -0.72332000 0.00638710 -0.12875000 -0.13678000 1.08180000 0.50012000 -0.35578000 -0.35578000 -0.347 -0.347 0.000 0.000 0.361 0.361 -0.736 0.366 -0.350 0.000 0.000 -0.739 -0.739 -0.737 -0.737 -0.129 -0.129 0.000 0.699 1.176 1.176 0.468 -0.356 0.000 0.000 0.000 0.000 0.000 0.000 -0.308 -0.308 0.019 -0.344 0.131 -0.295 0.969 1.693 0.000 0.000 0.316 0.316 -0.347 -0.347 0.000 0.000 0.361 0.361 -0.736 0.366 -0.350 0.000 0.000 -0.739 -0.739 -0.737 -0.737 -0.129 -0.129 0.000 0.699 1.176 1.176 0.468 -0.356 0.000 0.000 0.000 0.000 0.000 0.000 -0.308 -0.308 0.019 -0.344 0.131 -0.295 0.969 1.693 0.000 0.000 0.316 0.316 7.9449258 0.2584586 4.4678794 9.9540884 12.8161282 6.2778490 10.8793322 8.3569180 7.9702123 -0.1566593 11.8132538 12.3522066 3.7178573 0.2584586 2.5063480 8.4270974 4.1653171 10.4043573 11.6066000 10.6888777 9.2392787 6.2640503 7.1195118 8.8254304 5.9379046 5.6593052 0.2584586 NA 10.8289924 7.3191211 6.4580981 8.6825916 6.4233328 9.9348010 10.0921059 3.9022859 8.2570158 NA 7.4800122 12.2574562 7.8786450 6.9094767 0.8434211 5.9449264 7.9914402 NA 3.0133193 NA 4.2357041 4.4713826 0.5803385 11.0921059 NA 5.2009398 11.0817924 10.4491758 3.0657791 8.9931348 13.3411979 8.7542802 4.5252107 3.2126160 10.5664797 3.1653171 NA NA 1.8433809 12.8601379 5.9931354 8.5915807 15.7722221 9.7951580 10.3261956 12.8797902 11.9073444 8.9536535 10.6992943 13.1577821 9.4239603 8.7280671 9.0897325 0.2584586 8.8072470 12.3844036 11.1811954 12.8347914 6.0849742 13.6273732 8.9139560 4.8130115 9.2717478 8.2038692 10.9770308 6.7301005 9.8149312 10.5913009 4.9308509 1.2583983 11.0156068 4.5803505 8.4378490 10.4519505 10.1406861 11.2526018 8.1862029 9.2499471 10.3201339 6.4433000 10.4376064 9.2213213 10.7429963 9.9666469 10.5495958 9.1054824 10.9510407 10.8415079 9.5848547 -1.7417826 9.6283604 7.5083684 10.8084504 5.9588659 11.0064083 8.9440499 9.8061246 10.1082211 7.6273683 13.3327339 9.5501715 10.3385765 11.8603120 10.6622361 1.4283568 0.8434211 10.9431738 11.2617674 9.9022813 TCGA-A8-A079 69 0 NA 274 breast stage iiib t4b n3 m0 female 2007 NA yes infiltrating ductal carcinoma NA NA NA 1 1 1 NA 5 3 1 1 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.040392e-06 3.81477e-07 21.9512195121951 26.8292682926829 4.8780487804878 31.7073170731707 14.6341463414634 10.1597731 9.6315831 11.6922259 9.4939563 8.6972400 9.3545533 10.1661690 8.4980182 9.3174911 12.4131781 11.1889621 10.6226194 1.0236102 12.2052028 0.7606042 9.8374176 7.6505621 8.8028084 9.2849478 12.8454768 NA 14.5546725 8.2492453 9.8892253 12.3804551 4.4830676 1.0236102 9.7136285 12.3055664 0.4387187 7.7918206 5.7054610 4.1110981 3.7962240 9.3612582 10.5061082 9.6469082 10.5432726 9.1382462 11.0556821 3.7240718 11.2812206 14.7077823 8.3035721 10.0137355 11.8107227 10.7642604 4.6085964 -1.5614942 9.1682945 11.2480401 NA 10.3312167 4.1391175 5.3928703 5.9144067 9.0897256 12.0643827 10.0883791 12.1520604 12.7539650 8.9103492 10.9853272 10.2428049 11.5519277 11.1520604 4.8309905 12.0469287 10.2379555 -0.5612813 10.2927630 9.1597730 3.1402224 5.8480645 10.2676037 9.2958773 10.6578424 9.6680936 2.9622344 9.6142234 11.6412569 9.6254071 10.6076593 8.8363486 0.242500 0.242500 0.129250 0.064950 0.297580 0.245750 -0.396750 -0.943490 -0.755490 -0.755490 2.148500 -0.084262 -0.084262 0.285960 3.656900 3.656900 0.162650 0.162650 -0.775690 0.086956 0.000000 -0.313070 -0.367370 0.475980 -0.015054 -0.015054 -0.015054 0.732270 -0.488000 0.242500 -0.490260 0.129250 0.297580 0.159950 -0.015191 -0.015191 -0.937100 -0.452110 -0.415460 -0.184710 -0.301890 -0.353390 -0.270210 -0.270210 -0.270210 -0.270210 -0.084262 -0.084262 0.285960 -0.831300 -0.388730 -0.080275 0.162650 0.162650 0.162650 -0.775690 0.086956 0.189950 -0.054960 -0.782100 -0.313070 -0.367370 0.172110 -0.775070 -0.015054 -0.405840 -1.179500 1.017600 0.219140 0.000 0.000 -0.508 -0.794 0.163 0.163 -0.776 0.000 0.000 0.000 -0.782 -0.313 -0.313 0.172 0.172 0.000 0.000 -0.416 -0.268 0.732 0.732 -0.327 0.219 0.000 0.000 0.129 0.129 0.298 0.298 0.000 0.000 -0.397 -0.397 -0.185 -0.185 0.008 0.537 -0.270 -0.270 0.000 0.000 0.000 0.000 -0.508 -0.794 0.163 0.163 -0.776 0.000 0.000 0.000 -0.782 -0.313 -0.313 0.172 0.172 0.000 0.000 -0.416 -0.268 0.732 0.732 -0.327 0.219 0.000 0.000 0.129 0.129 0.298 0.298 0.000 0.000 -0.397 -0.397 -0.185 -0.185 0.008 0.537 -0.270 -0.270 0.000 0.000 8.74245462 3.79622395 4.34556670 10.34931662 11.65147421 7.30431390 10.97443524 7.91841367 9.03942302 1.24604319 11.12298416 11.88556590 5.60859933 -1.56149422 3.43867876 8.54327277 3.34556670 9.43019577 11.89528497 10.52381431 9.45339185 6.34556492 8.11286639 9.40373660 6.05338290 7.53143137 0.76060419 NA 11.18077271 8.36051484 7.85230166 8.66026087 4.99326223 11.08176117 10.19439601 1.89809224 9.54785157 NA 6.15977246 13.06043959 8.62106833 6.23309043 -1.56149422 9.81045049 7.77629550 5.65784291 3.02362796 0.02361022 3.64813177 5.55012187 1.60862002 11.41541697 -1.56149422 5.33349172 10.21839323 9.88006192 2.34556670 10.72955668 12.02246183 7.92450315 3.24602798 3.83099555 12.83982005 0.76060419 -1.56149422 1.76060419 0.02361022 15.33584065 6.08253016 8.10578544 12.20520277 9.03393143 10.61764983 12.84547676 13.36659069 11.91444908 10.73673644 11.93027648 11.20520280 9.16829454 9.22249064 0.02361022 7.48852224 11.41326769 10.5194914 12.1093301 7.9661507 13.6297319 7.9720039 5.3928703 9.4665798 9.0968854 10.0870000 6.6722938 4.1665949 11.1889621 8.5114763 -1.5614942 10.3797215 5.7962265 8.0570961 9.3167248 9.2588529 10.0598099 9.9879772 9.9444854 11.9844830 6.2524554 13.6186327 9.6469082 10.5887384 9.6085988 11.3105791 9.0915190 10.2640303 10.6013799 8.5909586 NA 8.7989723 5.1665949 11.2480401 7.0123206 10.3312167 5.3928703 10.4015699 9.0897256 7.8960550 14.6831678 10.4266483 9.1417122 12.0013933 9.6536000 0.7606042 NA 10.4689961 10.3863108 9.9685924 TCGA-A8-A07B 69 0 NA 1308 breast stage iia t2 n0 m0 female 2007 NA no infiltrating ductal carcinoma NA NA NA 1 2 1 NA NA NA 2 2 5 2 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 5.201959e-07 7.54716981132075 49.0566037735849 3.77358490566038 20.7547169811321 18.8679245283019 10.969438 10.616308 11.322652 9.353740 7.281112 7.603040 10.783382 9.336866 9.169061 7.866075 11.176457 10.286980 NA 15.219829 3.079481 7.499017 6.024337 7.876491 11.876815 12.653693 NA 13.255651 6.664440 7.824607 12.009920 6.866075 2.927479 9.233283 11.255901 NA 9.729094 6.249404 NA 2.927479 9.834365 10.640193 8.679391 11.762824 10.561681 11.939013 9.072699 10.223116 14.216149 6.600655 9.504064 10.715378 11.994760 5.042951 6.590440 9.355602 12.107384 NA 11.393721 6.166940 5.640193 4.512435 9.704456 12.187480 9.834365 11.707012 12.847828 6.327405 11.112901 10.296709 11.162691 10.873244 5.149869 12.833530 12.500912 NA 9.609299 10.913633 4.216982 5.986368 8.141254 10.049872 10.374099 12.658228 6.149867 9.694188 12.144759 12.318838 9.623283 8.532337 -0.34618000 -0.02425100 0.04174100 0.01241300 -0.42303000 0.04060900 0.02349000 0.08966200 -0.55957000 3.13330000 3.36990000 1.35150000 0.07254000 0.00000000 3.34390000 3.09650000 0.03002900 0.02004900 -0.83025000 0.06579900 -0.44113000 -0.81186000 3.65690000 0.57755000 -0.04888300 0.80305000 1.50450000 -0.35316000 -0.34618000 -0.34618000 -0.19352000 0.04174100 -0.34756000 -0.82032000 -0.00579530 0.00027728 0.02349000 -0.40252000 0.11404000 -0.84971000 -0.00733390 -0.55957000 0.01042400 0.01042400 0.00256780 -0.82773000 0.07254000 0.10862000 0.00000000 -0.84355000 -0.81359000 -0.81359000 0.03002900 0.02004900 0.07325800 -0.83025000 0.06579900 0.06579900 -0.44113000 -0.81318000 -0.81186000 -0.83752000 0.01670500 -0.04888300 1.50450000 0.42940000 0.01810300 0.15323000 -0.85082000 1.279 0.000 -0.814 -0.814 0.000 0.000 -0.830 0.000 -0.441 -0.799 -0.799 -0.812 -0.812 0.000 0.000 0.000 0.803 -0.055 0.291 0.000 -0.353 0.000 -0.357 -0.816 -0.816 0.000 0.000 -0.384 -0.384 0.000 0.000 0.000 0.000 -0.842 0.000 0.408 3.657 -0.218 -0.218 0.000 0.000 1.279 0.000 -0.814 -0.814 0.000 0.000 -0.830 0.000 -0.441 -0.799 -0.799 -0.812 -0.812 0.000 0.000 0.000 0.803 -0.055 0.291 0.000 -0.353 0.000 -0.357 -0.816 -0.816 0.000 0.000 -0.384 -0.384 0.000 0.000 0.000 0.000 -0.842 0.000 0.408 3.657 -0.218 -0.218 0.000 0.000 7.9224571 6.8019437 4.0054808 10.3621032 10.9749018 5.1838160 10.8263282 8.7258710 7.7683855 NA 11.1062781 10.0548559 2.3425263 4.4579882 3.6644373 8.5872727 NA 9.8303525 11.4743694 9.5872727 8.9742958 5.1838160 7.4922594 9.4282063 5.4854719 NA NA 0.7575354 10.4854704 6.0794784 6.0243374 6.8128319 4.6644430 9.8829505 10.4812108 2.0794634 9.2025649 NA 6.0974001 11.8219559 7.7405438 7.4717955 NA 8.5872727 7.4370304 4.8019450 2.7575567 NA 3.4579882 4.2811122 NA 11.0096240 NA 5.4579882 10.1890475 10.0670262 4.0054808 7.8608374 12.2842937 7.7687772 2.5649147 1.3424979 9.9473745 4.2811122 NA NA 2.5649147 13.497120 6.327405 7.596754 15.219829 8.998341 10.269303 12.653693 8.216982 10.690503 11.130415 12.978382 11.168001 9.355602 10.034837 1.757535 7.551966 11.020232 10.947374 11.895502 5.216982 13.888263 8.952307 5.216982 9.007848 7.855582 9.803760 5.886833 1.342498 11.176457 4.845013 2.757557 11.562488 6.652367 5.683312 12.402758 7.751904 10.476083 6.167789 9.202565 11.950767 4.149869 12.495988 8.679391 10.471795 8.047569 11.208761 8.983962 10.243379 9.200493 8.700064 NA 8.670768 8.760365 12.107384 2.342526 11.393721 8.288932 9.555211 9.704456 7.876491 13.764928 9.946139 9.609299 11.999831 10.862149 NA 5.640193 10.641720 10.902208 8.525734 TCGA-A8-A07C 57 0 NA 1034 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 3 3 NA NA NA NA 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 3.502653e-06 8.669932e-07 8.52713178294574 21.7054263565891 4.65116279069767 36.4341085271318 28.6821705426357 9.9014447 10.7292863 11.5485709 10.4831940 8.8714466 9.4095038 9.0786619 10.2049612 8.1660827 11.6724676 10.6260002 10.4424142 3.6742346 11.7893819 5.8307345 8.1687523 5.1660847 9.1607296 15.4028059 8.1990981 NA 5.5071191 9.4890793 8.7421123 11.3766912 5.6128302 0.4112093 9.8722655 11.5147455 1.2591821 8.6245429 8.0593731 -1.9105018 6.3228872 10.1889439 10.9931492 9.4853369 11.2388557 10.6344732 8.9331884 2.2591821 10.9863565 14.8262373 9.1247745 8.2852547 12.1863118 12.2689432 3.3371973 NA 10.6123391 11.9331884 NA 10.2932270 4.6438562 7.0948916 4.7331211 8.8958170 12.0762648 9.9829481 11.9281758 13.1298139 4.8574536 10.2111245 10.7860133 11.8098323 12.0105504 5.4616955 12.5488911 9.4440678 NA 9.2383794 10.3513622 3.6432444 5.2691753 7.9253177 11.6461326 10.4920130 11.3970374 -0.3257201 3.5811222 11.3407497 11.7061607 10.1710836 9.0807893 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.0463699 NA 5.5404799 9.1984450 12.2915442 3.9675006 9.7322215 8.6959594 7.9249704 NA 11.3374915 10.5732821 5.1116365 NA 3.9472453 11.1629068 3.7331265 9.9837062 11.5914776 11.6356795 10.3642278 -0.9107731 8.7554915 9.4949408 7.1660827 6.2591915 NA 5.3466556 10.6371259 7.1580451 5.9472477 8.6079206 6.7258925 8.9116628 12.3718490 2.6128243 8.7775177 2.5487079 9.3879027 12.7818283 8.4134477 6.0836197 -1.9105018 3.8706310 8.1714165 8.5517698 2.8441647 -0.9107731 6.8739018 3.8779503 3.1767376 10.8804302 2.6742346 7.6572234 10.8861181 10.3627716 4.9347571 8.9749637 12.3543696 10.0262732 6.1977927 3.3371973 9.9515173 0.4112093 1.2591821 -1.9105018 5.6965976 8.991680 8.145905 7.888549 11.789382 10.868166 11.120452 8.199098 11.232969 9.565507 12.048001 13.361095 10.935345 10.612339 8.175403 3.043467 9.236472 11.232332 11.5409936 10.8881441 4.9347571 14.5240255 8.9734379 6.5811207 9.7683076 5.1977907 11.3001365 6.6629147 4.7186247 10.6260002 9.7616927 4.4111957 11.4813164 10.4797050 8.8471823 12.6304850 10.8024391 10.1404763 7.9719102 8.1925552 10.1240662 7.9550006 10.4630434 9.4853369 9.1573737 10.4802423 8.0420084 11.8335756 11.9262053 10.7901405 10.1580456 NA 8.7012049 8.0036523 11.9331884 7.9253177 10.2932270 6.1714170 10.6675079 8.8958170 8.3994142 14.1949713 10.7385235 11.0266411 13.0528408 10.8726749 3.0892608 -0.3257201 11.0584740 9.7892734 10.9997227 TCGA-A8-A07E 81 0 NA 608 breast stage x t4b n3a mx female 2008 NA no infiltrating ductal carcinoma NA NA NA 2 2 4 NA 5 3 2 4 6 3 NA NA 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.491228e-06 2.427581e-07 12 38 6 24 20 9.9306356 10.0893158 12.1928050 10.0260993 7.5847904 9.0233213 10.5090887 10.1476934 9.8802063 13.0072442 11.4844853 10.7186188 3.2411690 11.9197939 2.8972211 10.1819034 4.3260555 8.2709143 9.5147507 12.5183488 2.9516624 12.5604286 8.4600422 9.1647197 10.6035094 4.2191375 -0.8031412 11.4252911 10.9067184 4.8406294 8.3890660 8.0233213 NA 5.5718133 10.2432149 10.9501986 9.4553389 11.4553390 10.4019553 11.9440219 6.1911263 10.4153362 14.8342469 9.1493394 10.3231516 11.2566244 10.8293138 5.2735868 5.2948045 9.2908506 11.4024135 0.1967329 10.8784506 6.3816485 5.5630940 5.3865971 10.6605527 12.0203392 10.0133567 12.8474321 13.0365180 7.7723119 11.0539764 10.6828990 11.3710745 11.7637783 5.4062271 12.2129719 10.5793970 2.2842476 10.0866572 9.2581441 3.2498852 5.3666964 10.6846130 10.0824694 10.4962672 9.9331749 4.4821771 10.7964534 12.5943808 11.9499897 9.6177859 9.4890945 0.45479000 0.45479000 0.00152550 0.01488800 0.91299000 0.00194180 -0.00055444 -0.00055444 -0.49350000 0.00180300 0.46280000 1.30370000 0.47907000 0.00694350 3.24810000 -0.07401000 0.00000000 0.00000000 0.00346870 0.00138680 0.00416320 -0.47723000 -0.47723000 0.08565400 -0.00083160 -0.00083160 -0.00083160 -0.00041585 0.00064269 -0.00346270 -0.00719580 0.00152550 0.01167900 -0.48461000 0.00194180 0.00194180 -0.00055444 -0.00055444 0.00069327 0.00016992 0.00763920 -0.49350000 0.00249690 0.00249690 0.00249690 0.00249690 -0.49162000 -0.01409000 -0.50204000 -0.02712400 -0.49527000 -0.49527000 0.00000000 0.00000000 0.00000000 -0.00152430 0.00138680 0.00138680 0.00416320 -0.49726000 -0.47723000 -0.47723000 -0.00083160 0.01532800 -0.00083160 -0.00041585 0.00666530 -0.48586000 -0.48586000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 -0.477 -0.477 0.000 0.000 0.000 0.000 0.000 0.454 0.000 0.000 0.000 -0.486 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 0.000 0.000 0.000 0.000 -0.494 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 -0.477 -0.477 0.000 0.000 0.000 0.000 0.000 0.454 0.000 0.000 0.000 -0.486 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 0.000 0.000 0.000 0.000 -0.494 0.000 0.000 0.000 0.000 0.000 7.8937402 5.4821739 6.9583242 10.3462026 11.5158806 6.2766307 11.4162440 10.5337564 8.2709143 6.3865971 11.9012170 11.2550827 6.2191414 0.7817374 3.4821771 8.1407531 3.6230357 10.4882315 11.6460506 10.8066443 8.7124727 4.0296649 7.7320480 9.7040721 7.0640518 7.8744927 2.8406244 -0.8031412 11.1911264 8.1230692 7.9814080 8.1348822 5.9649577 9.8791971 10.4702772 3.8114813 8.7378696 NA 8.2735886 12.4552654 7.4518013 8.7732573 NA 2.0041418 7.2789224 0.7817374 5.7966860 NA 6.1911263 4.8286062 2.6561989 10.6225134 NA 8.7542368 10.4728973 10.0061392 5.1509698 9.9920009 12.4510635 9.2135813 1.6562218 4.8549830 10.5718124 1.6562218 -1.8033930 0.7817374 1.6562218 15.454395 6.495981 8.860331 11.919794 10.184037 10.689127 12.518349 12.309050 9.067908 11.175126 13.257933 10.152423 9.290851 8.660297 2.518711 7.320894 11.350483 11.6784463 12.8258449 5.9246938 13.9963060 9.1726210 7.5343947 8.9748502 8.3704503 10.8599708 6.8077980 8.6240859 11.4844853 5.1392894 0.7817374 10.9593626 6.1334115 7.2438699 11.7180053 10.4270936 10.8020209 8.0547541 8.5265693 11.9511386 5.9246938 10.9810725 9.4553389 10.4053122 9.7178825 10.9834510 10.9651641 10.2755909 10.7225384 9.2212200 1.7817374 9.4314466 8.5443277 11.4024135 4.1740548 10.8784506 5.7045677 10.7349619 10.6605527 7.2815814 13.9716372 10.3085607 10.1647197 12.5957838 10.8667652 2.4446936 -0.8031412 10.5028347 10.5262890 9.5658251 TCGA-A8-A07F 65 0 NA 577 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 2 2 NA 4 3 2 2 6 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6.242351e-07 2.080784e-07 37.5 8.33333333333333 0 29.1666666666667 25 11.1654148 10.6245153 11.9024845 9.9175957 8.5236815 8.9245801 10.1407527 10.1509485 9.1304843 9.3081274 11.3967725 10.7533225 1.3131297 12.4279000 5.3231286 9.4969187 6.1544475 8.7579303 10.3816251 13.1844518 2.4651386 13.3814012 6.4146835 9.0429097 11.6252720 2.9505804 -1.8567372 9.3660153 10.0000349 0.9505431 8.9673836 7.2333330 12.0976894 4.6823767 10.3112657 10.9184192 10.2753988 10.8185160 10.9078847 12.7610322 5.2306834 11.6710639 14.5089619 10.0640125 9.3532829 12.2451140 11.5629173 4.4286248 3.9245845 9.4152668 11.4542591 -0.2717747 11.5400927 5.3526738 6.1432199 5.3623892 10.5755013 12.0080836 10.2123345 12.9129033 12.5050957 7.8677340 11.3338168 11.0471926 11.7327545 10.8702900 5.6026528 12.1718172 11.7937112 NA 10.2412526 9.6608898 3.9251069 5.8643199 11.3361297 10.2598893 10.0816974 11.1807674 0.9505431 9.6510151 14.2354201 11.5918530 10.5686986 9.0650614 1.51440000 1.51440000 -0.51487000 -0.52227000 -0.00057469 -0.00507270 0.51836000 0.50478000 0.50913000 0.50913000 0.50913000 0.02621200 0.01990200 0.51574000 0.51574000 0.51574000 0.00970730 0.00000000 -0.52830000 -0.51806000 -0.50465000 0.01500800 0.01500800 0.01500800 -0.00168310 -0.00168310 -0.00168310 0.02916400 -0.50143000 -0.51714000 -0.49570000 -0.52227000 -0.00057469 -0.00057469 -0.00334460 -0.00334460 0.51836000 0.50478000 -0.02121200 0.52483000 0.52921000 0.50913000 0.52973000 0.52973000 0.52973000 0.52973000 0.01990200 0.01990200 0.51574000 0.51574000 0.51574000 0.51574000 0.00970730 0.00000000 0.00000000 -0.52830000 -0.51806000 -0.52189000 -0.49966000 -0.52758000 0.01500800 0.01500800 0.01780300 -0.00168310 -0.00168310 0.01739900 0.01347200 -0.51302000 -0.51302000 0.000 0.000 0.516 0.516 0.000 0.000 -0.528 -0.518 -0.505 0.548 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 -0.501 1.013 0.000 0.000 0.000 -0.513 -0.492 -0.492 -0.522 -0.522 0.000 0.000 0.000 0.000 0.505 0.505 0.525 0.525 0.509 0.509 0.530 0.530 0.000 0.000 0.000 0.000 0.516 0.516 0.000 0.000 -0.528 -0.518 -0.505 0.548 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 -0.501 1.013 0.000 0.000 0.000 -0.513 -0.492 -0.492 -0.522 -0.522 0.000 0.000 0.000 0.000 0.505 0.505 0.525 0.525 0.509 0.509 0.530 0.530 0.000 0.000 7.5462324 -0.8567372 4.6026528 10.4911185 10.5382189 6.8779295 11.7886537 8.9339680 7.8591310 2.7870772 11.8332184 10.9176307 2.4651386 2.7870772 3.9245845 9.4600676 3.6350694 9.4181809 11.6092969 11.0822486 9.7834653 6.6108255 8.2306834 9.8292832 6.5820125 2.4651386 1.1431975 -0.8567372 11.6428172 7.6148953 8.7253625 9.3822222 9.3181462 9.6641484 11.0079869 3.4286248 8.4763756 -0.2717747 6.2673410 11.5367449 7.9147098 6.5736729 0.1432628 0.4651909 8.9441202 -0.2717747 1.9505804 -0.2717747 5.5944321 7.1193551 2.4651386 10.0410659 NA 6.9887108 11.0294886 9.7314665 2.9505804 9.6648209 12.5327846 8.3935187 4.9245798 3.5007766 10.6728950 1.8436623 NA NA 2.4651386 12.426992 6.056109 9.213341 12.427900 9.367825 11.462893 13.184452 12.090949 9.597520 11.394407 13.749134 10.602652 9.415267 8.082799 1.143197 7.471895 12.026818 11.813213 11.458370 7.485295 12.589977 9.323751 6.308128 9.129062 9.434391 11.541105 6.779845 4.483068 11.396772 4.292966 1.465139 10.667517 4.728182 7.766261 12.855532 11.015895 10.491119 7.645057 8.213341 13.875361 5.757930 11.771672 10.275399 9.667272 10.368729 11.428912 9.878777 10.872416 11.349930 10.453833 4.884686 10.141102 8.337362 11.454259 4.787077 11.540093 7.891413 10.566260 10.575501 8.380490 12.628295 9.375042 10.624515 13.156543 10.757240 1.313130 -1.381573 10.671919 10.670697 10.416725 TCGA-A8-A07G 65 0 NA 577 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 2 2 1 NA NA NA 4 4 2 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.075072e-06 3.121176e-07 19.5121951219512 12.1951219512195 4.8780487804878 53.6585365853659 9.75609756097561 9.52003579 10.60773680 11.84236869 9.84815861 8.65274640 9.16621130 9.96776461 9.61470488 10.11038647 13.47575500 10.14755093 10.54744009 -1.54203806 13.66133765 3.98155130 9.20198249 5.27816693 8.13922799 8.83628458 12.70976790 0.04292445 13.22369014 7.69400400 9.46150748 11.03068989 5.63790001 NA 12.04414685 10.18165059 4.43526854 8.33450660 8.10544813 NA 4.36488055 10.61943649 10.56814662 9.62415282 11.60598946 10.30387171 11.53330165 0.45796194 11.09416110 15.32491839 8.19640295 9.36262418 11.04154260 11.88254963 4.85030938 3.62791029 10.87320323 12.45816573 NA 11.07958372 5.58727197 6.35885688 5.29088144 10.61659929 11.56062154 11.03045306 12.69160932 12.69669293 9.46221002 10.91537054 10.29253572 11.10859267 11.11083464 4.98155130 12.19734836 10.85886911 -0.54203806 10.91177471 8.83302921 2.46519089 5.13041612 9.21787775 9.33986826 10.45587481 10.26333048 4.13041200 8.88530255 13.13763467 11.49227277 9.73643914 9.30347962 0.6905500 0.7124900 0.0000000 2.5410000 0.5180400 0.3680500 0.0207630 -0.0749370 0.0713910 0.0713910 0.1444400 0.1206400 -0.0696240 -0.0758780 0.1746500 0.1746500 -0.1352300 0.2243700 -0.4366900 0.0540910 -0.0431950 -0.3063900 0.3490900 0.3490900 -0.1247300 -0.1247300 -0.0989450 0.5392500 -0.1588600 -0.1206900 0.1140400 -0.4390800 0.2445100 -0.2446000 -0.1357400 0.3593700 0.0451410 -0.0749370 0.0469840 -0.1284900 -0.1284900 -0.5342900 -0.4094800 -0.4094800 -0.4094800 -0.4094800 -0.1392300 -0.1387100 -0.1453000 0.1746500 0.1190200 0.1490500 -0.1352300 0.1505400 0.1027800 0.0304510 -0.4233100 -0.4233100 -0.0237030 -0.4371300 -0.3063900 0.3490900 -0.3879500 -0.1247300 -0.1247300 0.0145600 -0.0042929 -0.0912870 -0.0912870 0.000 0.000 0.000 0.119 -0.135 -0.032 0.000 0.000 0.000 0.000 0.000 -0.306 0.043 -0.399 -0.399 -0.125 -0.125 -0.121 0.554 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.245 0.245 0.311 0.311 0.000 0.000 -0.128 -0.128 0.000 0.000 -0.409 -0.409 0.000 0.000 0.000 0.000 0.000 0.119 -0.135 -0.032 0.000 0.000 0.000 0.000 0.000 -0.306 0.043 -0.399 -0.399 -0.125 -0.125 -0.121 0.554 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.245 0.245 0.311 0.311 0.000 0.000 -0.128 -0.128 0.000 0.000 -0.409 -0.409 0.000 0.000 8.48727691 NA 6.08734615 9.69280709 11.62462349 6.12644843 11.62634837 8.90639519 8.40125159 -0.54203806 11.22865355 11.10317298 1.04292445 2.77991105 3.77992155 8.32989498 4.18590618 10.72828500 11.75519254 10.80450335 8.82540436 4.18590618 7.48035723 9.86844092 6.42377312 11.82458505 1.45801446 0.04292445 11.05324713 5.86738006 7.62289668 8.61027447 8.55206730 8.71879142 10.90558948 4.04295070 7.50511365 -0.54203806 8.08552345 12.51132163 7.46080480 7.22947929 -0.54203806 0.77989004 8.58727272 3.04295945 4.15842590 0.04292445 5.31597191 5.91979532 3.21288057 10.67503857 2.54544950 7.89470137 10.43096942 10.09958991 4.48035561 9.69340559 12.39692595 8.21621281 2.54544950 3.70592262 11.44062680 0.45796194 -0.54203806 1.04292445 1.77993205 12.78343566 5.30348122 9.13394671 13.66133765 9.73991964 11.41907755 12.70976790 12.64619212 10.09629889 10.68259436 13.01299810 8.82212433 10.87320323 9.42953312 0.04292445 7.15147630 12.13052549 10.802840 12.097443 6.858869 14.216420 8.671094 6.602648 8.933723 8.426656 9.067722 6.896782 5.788908 10.147551 6.811137 6.012578 11.115755 5.534806 6.363917 12.933153 10.285729 10.076375 8.802286 8.587273 12.913510 6.480357 12.029189 9.624153 10.544789 10.266552 11.536307 9.000054 10.513950 10.177378 9.551407 NA 9.834359 8.341839 12.458166 6.880055 11.079584 8.958832 9.623525 10.616599 7.610503 13.752072 10.048109 10.749448 13.216005 9.733532 3.315972 -1.542038 10.592095 10.165349 9.225347 TCGA-A8-A07I 69 0 NA 426 breast stage iiia t2 n2a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 3 2 1 NA 3 1 2 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 2.774378e-07 20 25.7142857142857 2.85714285714286 31.4285714285714 20 10.260126 11.151334 12.442391 10.306076 7.986157 9.341320 10.774388 9.880110 10.372848 14.537940 10.374286 11.288380 2.519190 16.820537 3.140664 9.153012 5.326534 8.380981 7.003613 13.295042 -0.181313 13.369485 3.462589 9.620164 10.920058 9.325542 -0.181313 11.081943 11.138410 1.818728 9.093699 7.657942 0.403704 5.689103 10.237118 10.201903 9.586923 11.105585 10.277658 11.245527 2.278163 10.957010 14.923440 7.719877 9.986784 11.484962 10.970389 6.037907 7.334439 9.462594 11.038814 NA 11.394278 5.638917 6.632520 5.342299 9.971023 11.993196 9.569445 11.846644 13.019331 7.202442 10.786685 10.195851 11.755192 11.958609 5.085527 11.691413 12.311968 -0.181313 10.363220 9.693720 3.213798 6.484074 10.337883 10.584853 10.139539 10.113359 2.403704 5.176291 12.947136 11.842839 10.170230 9.499098 1.3214000 0.6627200 0.0000000 0.0000000 -0.0018014 0.0027745 0.6582900 -0.0040162 -0.7004600 0.8558100 0.6720700 -0.7010900 0.0111210 0.0049969 0.0049969 3.6569000 0.0058309 -0.0041546 0.6229700 0.0083351 0.0228650 -0.6862400 3.6569000 1.9253000 -0.0087146 -0.0087146 -0.0087146 0.0258120 0.0137720 -0.7080100 -0.0256260 0.0000000 -0.0018014 -0.0018014 0.0027745 0.0027745 0.6582900 -0.0040162 -0.0040162 -0.7241100 -0.7103300 -0.7073800 0.0095883 0.0095883 0.0095883 0.0095883 0.0111210 -0.6988400 0.0049969 0.0049969 -0.7059400 -0.7059400 -0.0041546 -0.0041546 -0.0041546 -0.7066600 0.0083351 0.0083351 0.0314360 0.0339720 -0.6862400 -0.6866100 0.0137720 -0.0087146 -0.0087146 0.0258120 0.0056919 -0.6690100 -0.6916900 -0.701 -0.701 -0.706 -0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 -0.666 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.708 0.000 0.667 0.000 0.000 0.000 0.000 -0.701 -0.701 -0.706 -0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 -0.666 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.708 0.000 0.667 0.000 0.000 0.000 0.000 8.320575 7.171885 5.373328 10.285325 11.460339 4.578160 12.269692 9.570500 8.126918 1.403704 11.155245 11.605586 4.245001 6.373328 2.988667 7.801732 4.403704 11.182052 11.905704 11.702718 9.013495 4.796016 8.324550 9.734618 7.149656 5.388593 3.725632 NA 10.669316 4.772936 7.661089 8.767106 3.988667 10.241418 11.760703 2.140681 8.824363 NA 7.498218 11.272009 7.211056 6.682924 NA 3.342299 8.401821 4.927261 3.462589 3.211059 5.047556 6.009056 2.906198 10.242380 1.140648 6.874021 10.959568 9.811677 4.968487 9.715071 14.373627 8.269950 5.294470 3.403704 9.873343 2.278163 NA 1.988667 -1.181149 14.1433718 6.7196051 8.1959489 16.8205369 10.5951755 10.6654041 13.2950416 11.3381289 10.4785916 10.8386765 13.9576901 10.3828879 9.4625945 10.6867892 0.8187688 8.5398377 11.5875430 11.5945544 12.1753279 5.0855266 12.7440137 8.1630342 5.2781706 9.2046007 8.6066410 10.5272231 6.9008873 8.0523583 10.3742862 5.6767187 NA 12.0284964 5.9684848 8.5484952 12.7052924 10.1762904 11.3317257 9.0451505 8.7902820 11.3198291 8.1828730 11.8368116 9.5869227 10.4796257 9.7308792 11.5700732 10.3847924 10.2848148 10.9668972 9.0878651 0.8187688 8.7071013 7.2967391 11.0388143 7.7316279 11.3942776 7.8928797 10.6405124 9.9710233 7.5534481 12.3998212 10.1490951 9.1991995 12.2731662 11.2402773 3.0666575 NA 9.7021453 10.6277026 10.1350200 TCGA-A8-A07J 35 0 NA 365 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 2 3 NA NA NA 6 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 3.81477e-07 20.8333333333333 45.8333333333333 0 33.3333333333333 0 9.5828523 10.2510461 11.5413694 9.6879738 8.1675265 9.0843851 9.8812221 9.5442613 9.7323435 12.8960129 10.7288281 10.4577148 -1.1202942 12.9369596 3.5802540 10.2833587 7.2017417 8.1790218 10.4491950 12.1767302 0.8797842 13.5102518 7.1229884 9.3732891 10.2624380 9.4591299 NA 10.8976663 8.3575722 2.4647728 8.3776656 7.8105511 NA 4.4344014 9.9955080 10.0910939 9.9337399 11.1657941 9.8201276 11.1553566 -1.1202942 8.9350964 14.7295367 7.6606163 10.6321904 11.8748744 11.3759187 5.1835937 5.2196642 9.8812221 11.2138078 -0.1201374 11.5548889 8.4722709 7.0396857 6.1559374 10.5940595 11.3364251 10.7547953 11.5324349 12.7715028 8.6128294 11.0333660 10.5456340 11.0045815 11.1666605 5.3555484 12.5554403 10.7647476 -1.1202942 10.6284261 8.6628122 3.5248285 6.8910412 10.7662726 10.0714901 9.7776594 9.7986772 3.2017436 6.2721315 12.9126346 11.9781751 9.9111705 9.7331235 0.00833510 0.00833510 -0.66513000 1.10440000 0.00360760 0.00013863 1.87930000 -0.67435000 0.00299880 0.00299880 -0.00374290 -0.00144630 -0.00144630 -0.00152430 -0.00152430 -0.00152430 0.00000000 0.00000000 -0.01504000 0.01000600 0.01614600 0.01167900 0.01167900 0.01167900 0.00069327 0.00069327 0.00027533 0.01852300 0.00833510 0.00833510 -0.01216200 -0.66513000 0.00360760 -0.00526100 -0.00512270 -0.00512270 -0.65901000 -0.67435000 -0.67595000 -0.00205040 0.00263570 0.00299880 0.00724770 0.00724770 0.00724770 0.01852300 -0.00144630 0.02637300 -0.00152430 -0.00152430 -0.00152430 -0.00152430 0.00000000 0.00000000 0.00000000 -0.00346270 0.01000600 0.01000600 0.00624810 -0.65821000 0.01167900 0.01167900 0.00388540 0.00069327 0.00027533 0.01852300 -0.00166290 -0.64415000 -0.64415000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.083 -0.648 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.644 0.000 0.000 -0.217 0.448 0.000 0.000 0.000 0.000 -0.658 -0.658 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.083 -0.648 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.644 0.000 0.000 -0.217 0.448 0.000 0.000 0.000 0.000 -0.658 -0.658 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5837176 2.2017279 5.5236717 10.3412934 11.5096259 6.8387728 10.9495993 9.9636456 8.9377381 3.3392514 11.7166533 12.0799248 3.9242044 5.6611738 3.1277488 8.4209106 5.0497397 10.4746051 11.6179062 10.2769538 9.1594246 3.0497353 7.1466002 10.0917022 6.6212812 8.3796599 1.4647728 NA 10.6851548 6.0193661 8.0116712 8.3494560 5.9778454 10.3869792 10.0971659 6.6077342 8.2721315 NA 7.8854383 12.1934056 8.3555476 7.6611738 0.4647728 5.7986779 7.7776597 NA 4.8105511 0.4647728 4.6077327 5.7128296 3.8340134 10.5535647 NA 8.2084890 9.7292191 9.6455145 4.1652125 9.9438831 12.7767140 10.3781646 2.6871727 4.5236686 10.5667522 2.5802420 -1.1202942 NA 2.2017279 12.619810 4.127741 8.409245 12.936960 10.517091 10.162902 12.176730 12.291854 9.302930 11.052866 12.890517 8.341293 9.881222 8.726871 NA 7.322757 10.983102 11.144257 11.536686 8.274277 13.850141 9.055987 5.237365 8.590620 7.882629 10.220560 7.753258 7.029561 10.728828 7.103815 3.834013 11.336168 4.272128 5.597078 10.780303 10.179022 10.495444 7.759398 8.153610 11.874344 6.079487 10.352830 9.933740 10.528621 9.881222 10.209050 9.779171 10.594059 10.749793 9.526373 NA 9.611727 6.600913 11.213808 4.879814 11.554889 7.715865 9.969264 10.594059 7.545150 13.479378 10.230201 10.585446 12.761215 9.928301 3.049735 -1.120294 10.184165 10.303980 9.930343 TCGA-A8-A07L 58 0 NA 975 breast stage iiia t3 n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 1 1 NA NA NA 1 1 2 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.219503e-06 6.242351e-07 8.43373493975904 14.4578313253012 4.81927710843374 40.9638554216867 31.3253012048193 10.3641631 10.1739810 11.2514654 9.5855907 9.4753056 9.3300015 9.5291615 9.4301516 9.4500806 13.5011210 10.4461877 10.5713640 NA 12.7132181 2.3619087 9.7461908 4.0697279 9.1666871 7.1415207 13.0584726 4.5843011 14.0058270 4.8812829 9.6309251 11.6862413 6.5894459 1.2623730 8.0229764 9.9468732 2.3619087 8.5062290 6.7814502 0.0399806 4.5424809 9.7264832 10.0352787 9.8164157 10.0952650 9.7386873 11.6205553 0.0399806 10.4189999 14.2709037 7.6208818 9.8670606 11.4376573 11.3883420 3.6249431 6.2165713 9.0277203 10.0993270 -1.5449819 10.6333737 8.7182894 4.1554578 4.6448427 9.8037483 11.8789239 10.2425146 10.4022918 12.7248043 8.9195659 11.2655917 10.2182325 11.1714109 10.7238545 4.7029456 11.1278874 7.6022252 NA 10.2392460 9.4994142 2.3619087 4.4322980 11.3901852 9.5635447 11.1419583 9.8278852 3.8125701 6.6981935 11.1163529 10.1897297 10.3505954 9.1132317 1.1403000 -0.7530500 0.0602220 0.5972100 -0.0182160 0.0000000 -0.0055375 -0.8316300 3.6569000 0.7640800 2.4395000 0.0471260 0.7970400 -0.0194520 0.0539480 0.0539480 1.5564000 0.0353830 -0.8054200 -0.0579240 -0.7421200 -0.4526500 -0.3233300 0.7171600 -0.7362600 0.0607940 0.0607940 0.8486900 -0.7490700 0.0013868 -0.7514100 0.0447150 0.7715600 0.6275200 -0.0105080 -0.0105080 -0.0058140 -0.8316300 0.0238470 0.0029133 0.0343950 0.7833100 -0.7275600 -0.7275600 0.0221640 0.5044600 0.0273570 -0.7817000 -0.0189020 0.0539480 -0.7769400 -0.7769400 0.0221640 0.0421600 0.0921700 -0.7862400 -0.7597800 0.7216800 -0.7832800 -0.7578000 -0.4526500 -0.3233300 0.7478400 -0.7591700 0.0607940 -0.7631200 0.7786800 0.9007000 0.1376100 0.000 0.000 0.000 0.000 0.000 0.000 -0.796 -0.768 0.000 -0.616 -0.737 -0.453 -0.323 0.000 0.000 -0.736 -0.736 -0.749 -0.749 -0.763 0.000 0.000 -0.744 0.000 0.000 0.000 0.597 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.782 -0.018 0.000 0.000 0.286 0.286 0.000 0.000 0.000 0.000 0.000 0.000 -0.796 -0.768 0.000 -0.616 -0.737 -0.453 -0.323 0.000 0.000 -0.736 -0.736 -0.749 -0.749 -0.763 0.000 0.000 -0.744 0.000 0.000 0.000 0.597 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.782 -0.018 0.000 0.000 0.286 0.286 8.3315373 NA 8.2115764 9.9898093 11.8023647 7.1517097 10.9885932 8.4409900 8.5482794 NA 10.8327729 10.8694570 4.1554578 NA 2.7769462 8.4801597 3.2099056 9.1176886 11.8554993 11.8135339 10.6525440 4.1274434 8.0493449 9.6656914 5.5318368 4.4092144 2.2623730 -0.5449819 10.0191697 8.3589021 8.9144518 8.8333149 8.0418601 11.0635476 10.4942819 3.0399806 9.6155219 2.1554578 8.0172627 11.9725665 7.9568570 7.0474773 NA 8.2363797 6.8300601 6.2363797 4.6644715 0.7769462 3.3619087 5.0456832 1.0399806 10.7848165 -0.5449819 7.1345003 10.1914220 10.2094902 2.5424809 8.9980519 11.8361574 7.5996786 3.2623730 3.2099056 12.3020775 3.8125701 NA 0.4550181 0.0399806 14.469338 6.415022 8.422246 12.713218 9.232612 9.884427 13.058473 10.961080 9.161516 11.672069 12.478081 10.405576 9.027720 7.683839 4.542481 7.972690 12.619456 11.737240 11.258546 5.749642 12.934484 7.954866 4.098874 9.752510 4.477386 10.979488 5.499415 10.086652 10.446188 6.294224 -1.544982 10.256728 5.024874 8.703588 11.284148 10.370900 11.231248 8.191422 10.452553 11.599838 3.584301 11.143303 9.816416 9.809821 10.156327 12.383261 9.717115 10.955115 11.266997 8.710049 NA 8.868278 6.385757 10.099327 3.262373 10.633374 7.172697 10.845458 9.803748 7.306769 13.110383 9.869177 9.572663 11.504188 9.991267 -1.544982 1.914450 10.674491 11.115016 10.354377 TCGA-A8-A07O 51 0 NA 304 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.005712e-06 3.121176e-07 26.3157894736842 34.2105263157895 0 26.3157894736842 13.1578947368421 9.8096527 8.9709523 11.7662198 10.1928531 8.4908461 8.2485291 9.4611612 10.6956570 12.8773268 12.5932571 10.2804461 10.3429014 5.5622058 11.4915954 3.4678794 10.0609415 6.0266098 8.5169914 7.4775940 7.4482493 NA 9.4781987 7.2038687 9.1469250 10.8804770 8.2668540 1.2583983 7.7402247 10.3315626 2.1653010 8.6593045 8.0641688 -1.7417826 4.0913190 8.9709523 10.3505216 8.5193445 9.8555466 10.4454679 11.0581115 0.8434211 9.0833839 15.2639072 8.6946995 10.7890753 10.2545455 11.4092831 2.1653010 0.2584586 9.7716593 10.8325456 0.2584586 10.8795613 5.8433885 7.3590871 4.2807930 10.0377342 11.9410906 9.8139729 11.6099166 12.5463539 5.8053208 11.1492594 10.8447841 11.1105645 11.5945132 4.4081752 12.7323845 9.5814799 0.5803385 9.9605979 11.0845764 2.7191615 3.4678794 8.8216216 9.6027211 11.6382096 11.5444053 -0.7415414 5.9237601 11.6702009 11.0879497 9.8864149 8.7432480 2.1742000 1.1018000 -0.0036011 0.5647200 0.0000000 0.5088200 0.0253900 -0.0018014 -0.6044800 1.1009000 3.5071000 0.0056807 0.0041632 0.0062481 0.0062481 0.6142600 0.0167050 -0.0065050 -0.5915600 -0.5797700 0.0287630 -0.5295100 0.6255100 0.0308730 -0.5385500 1.1694000 -0.5440100 0.0063871 0.0345360 0.5613400 -0.0160170 0.0070826 -0.5743700 -0.0060904 -0.5886300 -1.0266000 0.0253900 -0.0018014 0.0030522 0.6540600 0.0139110 -0.6032200 -0.0252090 -0.0230180 0.0120970 0.0397610 0.0041632 0.0225850 0.0062481 0.0062481 -0.0037395 -0.0037395 0.0079175 -0.0065050 0.0073609 -0.5850000 -0.5462300 -0.5715000 0.0126550 0.0204830 -0.5634600 0.0431570 -0.0256200 -0.5057700 -0.5440100 0.0047190 -0.0231550 0.4585400 0.0317180 0.000 0.000 0.000 0.000 0.000 0.000 -0.585 -0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.506 -0.506 0.561 0.561 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.587 0.000 -0.080 -0.589 0.000 0.000 0.000 0.000 0.514 1.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.585 -0.572 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.506 -0.506 0.561 0.561 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.587 0.000 -0.080 -0.589 0.000 0.000 0.000 0.000 0.514 1.101 0.000 0.000 0.000 0.000 8.9605977 -0.7415414 4.8877836 10.1218370 11.4026054 4.9751395 11.1105645 8.7846211 6.5288135 NA 10.9655686 11.5543461 3.5063480 -1.7417826 1.7178683 9.0952646 2.0657791 8.9458008 11.4462411 12.0005240 9.9536535 -0.1566593 9.9722412 10.3181076 5.4081718 9.4794080 -0.1566593 NA 10.4233320 2.3458789 7.0032593 8.7662198 6.8091713 10.3480180 11.9383450 -0.1566593 8.7260308 -1.7417826 8.2945987 12.8567103 6.8583379 7.1950631 NA 7.5134536 8.3966968 1.8433809 1.7178683 -1.7417826 4.6678183 2.3644324 2.2584285 11.4969792 1.9588798 10.5018967 10.9036333 10.4345983 4.2584285 8.5368747 12.0169607 7.2724460 4.7819891 3.1163980 10.4587108 0.5803385 4.6678183 3.0133193 8.3137075 10.510011 10.689662 8.097629 11.491595 8.604939 11.433663 7.448249 11.499813 9.455027 10.817563 13.354729 13.929109 9.771659 7.482427 6.052842 8.404357 11.594932 10.7617540 10.8613560 6.6291132 13.7711628 9.4507180 5.1891643 9.1015610 9.8827636 10.4230430 5.7341595 6.1039151 10.2804461 10.3747691 0.8434211 10.7003319 6.2752343 10.6228170 12.7405398 11.4330388 9.6242007 7.9215208 9.4401985 9.2548987 5.8508819 9.8710817 8.5193445 9.7607597 10.5333856 12.1539058 11.9543059 11.8472569 11.1952471 10.1924845 NA 9.1118360 6.2918485 10.8325456 4.4482468 10.8795613 5.3458895 11.1309808 10.0377342 8.8734847 15.0021857 10.8339644 10.5952107 13.5299976 10.5158130 3.0133193 -0.1566593 11.6266587 9.1772885 9.4926438 TCGA-A8-A07P 68 0 NA 334 breast stage iib t2 n1 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 1 1 NA 4 3 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 4.161568e-07 26.8292682926829 14.6341463414634 2.4390243902439 36.5853658536585 19.5121951219512 8.90780431 9.46199545 11.10785784 9.29109839 8.82668449 8.93962593 9.44349912 9.11079126 9.53302422 13.53436943 11.47851179 10.12693092 0.78885273 14.86352314 4.48930529 7.84414584 5.32491499 7.66660749 8.04813590 12.70690647 0.78885273 13.08784218 2.78887360 9.11393460 10.38281443 8.84631341 -0.53303362 11.44260398 9.91039674 0.05185930 7.73137742 6.29348268 0.05185930 3.82448275 9.81344885 10.90987854 11.00682087 10.44743166 10.36402420 11.18503981 4.05189409 10.86460968 14.63144923 7.76252024 10.43524187 11.99159922 10.65212022 3.71486094 6.29982527 9.26864352 10.69274503 -0.53303362 11.22744712 5.36175433 5.56496647 4.95878701 10.18289710 11.37457689 9.54441835 11.23532618 12.53125683 8.30298522 11.06382365 9.23346390 11.05095805 10.29705405 3.92636954 11.77513188 11.40908300 NA 9.83489574 9.04813563 0.06626144 5.78886317 10.00463889 9.42548784 10.11843526 11.25422548 2.63686819 9.31399245 11.34153228 10.37532772 9.77242692 8.92020575 -0.0175460 0.0028120 -0.0248660 -0.0988140 -0.0205490 0.0132130 -0.0056167 -0.8181900 0.8262700 0.7101200 0.8110300 0.0054139 0.0054139 0.0033299 0.0033299 0.0033299 -0.0205490 0.6154700 -0.8114500 0.0052749 0.1017600 0.8079200 2.1875000 3.4543000 -0.0926100 -0.0926100 -0.0926100 0.9356900 -0.8351000 -0.0175460 -0.3058000 -0.0360880 -0.0651790 -0.0290380 0.0132130 0.0132130 -0.0056167 -0.8181900 -0.0012473 -0.0023553 0.0023581 -0.8036800 -0.0123000 -0.0123000 -0.7960300 -0.0466430 0.0054139 0.0054139 0.0033299 0.0033299 -0.8052600 -0.8052600 -0.0205490 0.6154700 0.6154700 -0.8003600 0.0052749 0.0052749 0.2665500 -0.8214600 0.8079200 0.7235700 -0.8370400 -0.2064700 -0.0926100 -0.8111200 -0.0022168 0.0866660 0.0866660 0.000 0.000 0.000 0.000 0.000 0.615 -0.800 0.000 0.102 0.568 -0.237 0.808 0.808 -0.024 0.366 0.000 0.000 0.000 0.000 0.125 0.936 0.000 0.000 -0.306 -0.306 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.804 0.686 0.000 0.000 0.106 0.106 0.000 0.000 0.000 0.000 0.000 0.615 -0.800 0.000 0.102 0.568 -0.237 0.808 0.808 -0.024 0.366 0.000 0.000 0.000 0.000 0.125 0.936 0.000 0.000 -0.306 -0.306 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.804 0.686 0.000 0.000 0.106 0.106 8.8571039 NA 6.0367912 10.2970540 12.1650971 6.2284859 10.7922405 8.5763347 8.9504588 1.9263790 12.3242358 11.5646002 3.7523418 3.7888632 3.5113289 8.4641144 3.5962196 8.6505704 11.1593326 10.5920257 9.4456456 5.2482957 6.2613503 9.0060938 6.3617526 4.3249186 0.7888527 NA 10.4648202 7.0742657 4.9747312 7.9667811 4.4442165 9.6240735 9.8624692 5.8592515 8.2903023 NA 6.5596922 12.6620766 6.9747301 7.0999306 NA 7.0405823 8.9345407 NA 4.2218230 NA 4.3738291 4.7736324 2.6368682 10.8348958 -0.5330336 8.2629748 10.5178040 10.3696870 2.4669403 8.9904971 12.6159677 8.7266783 1.0519289 3.4211290 14.6971807 3.4669403 NA NA 0.4669664 13.892467 5.724323 8.777548 14.863523 8.919176 10.752048 12.706906 12.104466 8.767288 10.815387 13.098283 10.512354 9.268644 9.187179 -1.533242 8.602644 11.207559 10.6797355 11.8180123 6.7978521 13.3904000 8.7695741 4.3249186 9.1188837 8.7372304 10.1402220 6.3798237 5.4781629 11.4785118 6.6166826 3.1673740 10.7606941 4.6957545 7.0703013 9.7809518 9.9592890 10.4240371 8.8277822 8.7511808 13.3193183 4.8244878 9.8752490 11.0068209 10.5410766 9.5517434 10.8354415 8.7569539 11.3449860 10.6496398 9.5656252 0.0518593 7.8446010 6.7509495 10.6927450 2.5543924 11.2274471 6.8112308 9.7820846 10.1828971 7.2713893 13.5510376 10.0085157 10.4046767 12.3714756 9.5003581 3.2218152 1.0519289 10.3764532 9.8688812 9.3029854 TCGA-A8-A07R 80 0 NA 273 breast stage iiic t2 n3a m0 female 2009 NA NA infiltrating ductal carcinoma NA NA NA 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 9.294168e-06 2.288862e-06 7.33137829912024 17.5953079178886 6.158357771261 41.3489736070381 27.5659824046921 9.6359325 9.5628196 11.6670231 9.1262489 8.9536095 9.0201680 8.7822647 10.2408915 11.2978947 12.5893387 10.5824368 10.7709107 0.2636354 12.5226192 2.5855395 8.8783213 3.4335337 8.0933341 9.8653824 4.4924301 1.0709388 10.1854526 8.6730027 8.8993297 11.4689467 4.5115376 -1.7364848 6.8560682 11.0218348 4.9501138 9.7896217 8.7291778 1.7230342 4.7871712 9.5645361 10.3543856 9.5133176 10.7537103 9.6304801 11.3961113 1.4335471 7.1854523 15.5482460 7.0359263 8.9966269 10.8172409 12.4274971 3.2636054 3.0184917 10.4095438 9.4453851 NA 9.9417716 5.6898750 5.5397358 4.7554645 7.5651082 12.1753781 9.8906894 10.6438021 13.0324679 7.6473159 10.5570832 9.6704916 11.5052969 11.9874858 4.3721372 13.5602052 8.3890251 NA 11.0996620 10.1102772 2.7269620 3.7871712 11.3160098 10.9636178 10.9253897 10.3590086 4.0449711 5.0050766 12.7158528 10.3025306 9.7235555 8.8551338 1.403200 1.013300 -0.088374 1.796800 1.017000 -0.123170 2.535000 0.459220 -0.051046 0.995710 1.342200 2.246900 -0.174800 1.265000 0.766380 0.766380 0.539600 0.822190 1.420200 1.375000 2.146800 -0.175250 0.447480 0.447480 -0.206720 0.905330 0.691850 0.212230 -0.139360 -0.133550 0.379730 -0.078951 -0.108280 -0.750280 0.278520 -0.130050 0.606840 0.459220 -0.775750 -0.132120 0.449520 0.000000 0.957950 1.087600 -0.202240 -0.127840 -0.138970 -0.112340 -0.125900 -0.023977 0.250580 0.250580 0.318830 0.822190 -0.160520 -0.139490 -0.112470 -0.112470 -0.143610 -0.091816 -0.175250 0.447480 -0.753310 -0.206720 0.691850 -0.073096 -0.800610 -0.166880 0.568280 0.109 -0.175 0.251 0.251 0.114 0.196 0.394 -0.112 -0.155 0.809 -0.115 -0.175 -0.175 0.463 0.463 0.485 0.692 -0.139 1.049 0.211 0.211 0.352 -0.133 -0.112 -0.112 0.000 0.000 -0.144 -0.144 -0.130 -0.130 0.459 0.459 0.317 0.317 0.000 0.874 0.364 -0.128 0.354 0.354 0.109 -0.175 0.251 0.251 0.114 0.196 0.394 -0.112 -0.155 0.809 -0.115 -0.175 -0.175 0.463 0.463 0.485 0.692 -0.139 1.049 0.211 0.211 0.352 -0.133 -0.112 -0.112 0.000 0.000 -0.144 -0.144 -0.130 -0.130 0.459 0.459 0.317 0.317 0.000 0.874 0.364 -0.128 0.354 0.354 9.3080056 6.6079073 6.7352866 10.1674934 12.2275011 5.3521335 10.8133963 8.8428616 7.8325939 NA 11.8322803 10.9873600 1.2636354 NA 4.9501138 9.6532430 2.6559242 9.6772395 11.9554641 11.2760616 9.4335366 -1.7364848 7.9864189 9.2373089 5.1339744 11.9337146 0.2636354 -0.1513620 11.0927397 2.5115439 5.1339744 9.9338252 7.9413311 9.6908354 11.2916903 0.2636354 10.0164104 5.0965022 7.3510744 12.3546337 6.7594661 8.8783213 0.2636354 3.3510770 8.3603270 0.2636354 2.0709732 NA 2.2636054 1.7230342 2.4335471 12.8873217 4.2636129 8.5079754 11.0618809 11.3747473 2.4335471 9.9324966 14.9407944 8.1447255 3.1705020 1.7230342 10.5112425 1.9640659 5.9074676 1.0709388 6.2466057 9.7085851 9.5934079 8.1385928 12.5226192 10.4478671 11.9398993 4.4924301 12.8053737 9.8934235 10.8716354 13.1098365 11.5054458 10.4095438 8.6483953 0.8485578 8.6473159 11.2999569 10.7273914 11.6686201 4.5855395 13.8465750 8.7013636 7.2997850 9.5501694 9.4755000 9.8389711 4.6898750 4.7714050 10.5824368 10.3263324 4.8635222 11.2956573 7.7271363 9.5011204 12.2705513 9.4497258 11.0673391 8.1043896 9.6719414 9.1408957 7.5020163 11.2194050 9.5133176 9.9110700 10.4209586 10.5064880 10.3090299 7.5257064 10.7815270 9.7250910 -0.7364848 9.1720041 5.2408905 9.4453851 7.6793534 9.9417716 5.3825531 10.0229880 7.5651082 8.3866984 13.5355123 10.7778325 11.1561544 13.6308216 10.5162770 NA 4.8485729 10.3464260 10.8609658 9.3986796 TCGA-A8-A07S 73 0 NA 243 breast stage iia t2 n0 m0 female 2009 NA yes mixed histology (please specify) NA NA NA 1 1 3 NA 2 2 4 1 3 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.451607695 9.805724367 12.143854787 9.775190003 8.437748744 9.771327364 10.799235393 9.451607798 10.484335638 13.268780914 10.659046683 11.578761148 0.005902957 12.819417057 2.880372075 9.756889188 6.432167712 8.138616879 10.886761988 13.396878070 1.420940456 14.278314156 8.819684148 9.707838973 10.575442245 8.341293312 0.005902957 11.493240672 10.391765465 2.420940456 7.195727516 6.169133306 NA 3.590865458 9.627954959 10.409980199 9.869573178 10.896420658 10.074233535 11.446426216 2.121380174 11.256004066 15.030148165 8.786410132 9.484335739 11.967473341 11.556810129 4.064796646 1.228295378 8.356105506 11.430594253 NA 11.329145521 3.121380174 4.912793552 4.960099267 9.980317689 11.843662395 10.267606255 11.778767462 13.021782675 8.605815799 10.806263713 10.447996403 11.069298172 11.428318294 5.035650300 11.692257660 12.825350378 -1.579059544 10.126140963 8.738353070 2.518560317 5.795979887 10.923275111 10.028733236 10.257779934 9.699390088 3.005902957 7.890582273 12.140864081 10.267997919 10.400008434 9.400365865 1.30990000 1.40820000 0.00638710 0.00638710 0.01451600 0.00930980 -0.01009400 -0.86361000 -0.83978000 -0.00912860 0.00680440 0.00388540 -0.00202430 0.00000000 0.00000000 0.00000000 0.00748020 -0.00290910 0.00624810 0.00416320 -0.01465700 -0.02822100 -0.02822100 -0.02520900 -0.04400900 -0.04400900 -0.04400900 -0.01106000 -0.01295100 0.00069327 -0.00360110 0.00638710 0.01372300 0.01181800 0.00930980 0.00930980 -0.01009400 -0.82407000 -0.85154000 0.00486110 0.00139530 -0.83978000 -0.00110870 -0.00110870 -0.00110870 -0.00110870 0.01363200 0.01209700 0.00000000 0.00000000 0.00000000 0.00000000 -0.00166290 -0.00290910 -0.00290910 0.00694350 0.00416320 -0.04157200 0.00819590 -0.82903000 -0.02822100 -0.02822100 0.01137900 -0.04400900 -0.04400900 -0.01106000 -0.00456950 -0.01491600 -0.02657700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.150 -0.829 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.310 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.824 -0.824 0.000 0.000 -0.831 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.150 -0.829 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.310 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.824 -0.824 0.000 0.000 -0.831 0.000 0.000 0.000 0.000 0.000 8.110938 NA 5.454363 10.218197 11.638595 7.943189 11.939225 11.948442 8.827868 -1.579060 10.818348 11.549581 10.755214 1.420940 1.742869 8.239523 3.944502 10.326328 11.721579 11.561291 9.227490 4.630394 7.950371 10.086721 5.678328 2.813258 1.228295 NA 10.692987 6.050297 4.960099 9.143748 4.847205 10.126875 11.202710 3.005903 8.145454 NA 6.932693 12.963307 8.398220 7.432168 1.005903 1.228295 8.777392 4.375137 1.590865 NA 2.420940 5.964669 NA 10.580812 NA 5.998369 10.655459 9.847205 4.005903 9.921782 12.371223 7.500425 2.742869 2.121380 13.455782 3.550223 NA 2.944502 NA 13.116512 5.339804 8.533380 12.819417 10.177914 11.326516 13.396878 13.074178 9.218602 10.885486 13.004317 9.597114 8.356106 10.712687 2.327831 7.064797 11.598983 10.968558 12.376409 8.947440 14.120510 8.819684 3.706343 9.024567 9.276860 10.031121 5.813258 7.434961 10.659047 4.005903 NA 10.926752 7.863884 7.091845 9.940085 8.927744 10.831922 9.186392 8.813258 11.871121 3.228295 11.008491 9.869573 10.191604 9.815403 10.058471 9.435659 10.098220 10.595242 9.369308 NA 9.431287 7.131024 11.430594 2.813258 11.329146 11.313104 10.606246 9.980318 7.473509 13.922716 10.362355 10.480285 13.451694 9.675379 1.420940 NA 10.370038 10.785075 9.464652 TCGA-A8-A07U 66 0 NA 760 breast stage iiia t2 n2a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 3 3 4 NA NA NA 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 6 0 0 0 0 0 4.508365e-07 3.121176e-07 18.1818181818182 22.7272727272727 9.09090909090909 27.2727272727273 22.7272727272727 9.7947973 9.4418457 11.5390844 9.7303716 7.8601981 9.2218019 8.5771607 10.5236856 11.7374860 14.1434338 10.7032893 10.7999845 0.2627939 12.6606190 3.2627639 9.8866475 6.7810908 8.5217245 8.1310745 7.3747709 NA 10.8808457 8.7371479 9.1040682 10.1998946 8.0506687 -1.3222888 10.7259499 10.8555346 1.2627939 9.0342556 7.8477289 NA 7.3537608 9.7098493 11.2700270 9.6622221 9.8218245 9.2514507 11.6721570 2.5846980 6.7276523 14.9667237 7.9316511 8.9952162 11.1459185 10.6629339 4.4057269 NA 9.5764050 9.9357806 NA 10.8067645 6.3643045 7.9929531 5.7546203 9.6579431 11.6339982 9.8458488 11.1066871 12.6701224 6.3502285 11.0898441 10.2666260 11.1598552 11.5458544 4.9815833 12.1030195 7.2998555 -0.3221084 10.7807635 9.5083187 4.0036922 6.6026157 9.9304690 10.0154255 10.5642623 10.1841112 -1.3222888 8.1040682 12.6279038 11.9812990 10.1560677 9.6070619 1.070800 0.268480 -0.043292 0.338250 -0.086525 0.321450 0.192580 -0.035683 -0.066214 -0.066214 0.894130 1.353900 -0.062380 0.031617 0.031617 0.031617 0.710250 -0.042614 -0.055865 -0.038404 0.128780 -0.062994 -0.062994 -0.062994 -0.081434 1.074400 1.496800 0.123620 -0.045597 -0.045597 -0.243710 -0.043292 -0.057886 -0.086525 -0.157960 -0.157960 0.192580 0.192580 -0.059034 0.147750 0.139940 -0.080372 0.334200 0.334200 -0.046274 -0.197210 -0.062380 -0.061383 -0.248090 0.031617 0.031617 0.031617 0.726650 0.079005 0.118480 -0.050332 -0.038404 -0.062457 -0.254640 0.197350 -0.062994 -0.062994 -0.052763 -0.093101 -0.078506 0.123620 0.150290 0.031617 0.460630 1.323 0.000 0.000 0.000 0.312 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.236 0.236 0.124 0.124 0.121 0.000 0.148 0.148 0.000 0.338 0.000 0.000 0.321 -0.108 0.193 0.000 0.140 0.140 0.000 0.321 0.334 0.000 0.123 0.000 1.323 0.000 0.000 0.000 0.312 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.236 0.236 0.124 0.124 0.121 0.000 0.148 0.148 0.000 0.338 0.000 0.000 0.321 -0.108 0.193 0.000 0.140 0.140 0.000 0.321 0.334 0.000 0.123 0.000 8.3747713 NA 6.0441252 9.6225157 11.3497869 5.9715045 11.1611156 10.2569498 8.0844125 1.2627939 11.9550910 11.8438882 3.4326922 4.1040682 4.0701231 8.5726214 5.8969717 12.5172042 11.9750065 11.3873183 9.2674548 6.3360155 7.9114231 10.0636659 9.1186727 6.9632059 4.8477264 NA 10.6953080 5.2169631 7.6721573 8.9608919 6.1696565 9.9266029 11.3691109 5.7967457 8.6763940 2.9997295 8.6319999 11.8851230 7.7705608 7.4787033 NA 2.7652589 7.8452216 3.9997295 1.6778014 NA 7.4979827 4.1372330 5.8173546 11.1045925 -0.3221084 11.0794831 10.4681521 9.7344414 6.8019243 11.4220067 14.8922935 10.3449151 5.3920495 4.4057269 9.9608919 1.4851692 -0.3221084 4.2627639 3.7652695 11.492524 10.081881 8.215022 12.660619 9.934602 10.694960 7.374771 9.647190 8.945761 11.429138 14.028363 11.467337 9.576405 7.799337 2.925734 7.281430 11.417373 11.0081603 11.8234174 5.7330858 12.8042629 8.4293477 8.0528430 9.5154316 8.9781562 9.0746866 8.7745186 7.5106938 10.7032893 10.2674547 0.2627939 11.1305596 8.6188513 9.9922283 11.9025590 11.1152956 10.3085257 7.8460996 8.1555620 10.1072103 10.6392532 10.4181873 9.6622221 10.2842088 9.5573869 11.2450467 9.7646033 10.9864270 10.8990886 9.1656437 NA 9.7980674 7.3431395 9.9357806 11.0056369 10.8067645 6.1207480 9.9867114 9.6579431 7.9678222 13.1725342 10.2256621 10.5846942 12.8149548 10.4360268 7.2323921 2.9997295 10.1701575 9.7725411 8.7758358 TCGA-A8-A07W 76 0 NA 304 breast stage iv t2 nx m1 female 2009 NA no infiltrating ductal carcinoma NA NA NA 1 2 1 NA 2 2 1 2 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.907385e-06 6.589149e-07 27.3972602739726 19.1780821917808 0 32.8767123287671 20.5479452054795 9.7629349 10.1143217 11.8711688 10.2466270 9.0732070 8.3433168 9.4142440 10.1242145 8.6937587 14.7791686 11.5226223 11.2339292 0.6680283 12.6363003 3.3461343 9.1502685 4.9899927 9.0431050 6.7512789 12.7198862 -1.6538090 12.9138559 -1.6538090 9.2805212 11.9975255 5.5940648 0.9310779 10.1845536 11.2644417 2.1534811 8.2165019 7.1307723 7.5725494 3.7036877 9.6815278 10.6945889 9.0185627 10.3829979 10.0070247 11.5913930 6.1978870 10.2507720 15.1526241 9.0217240 9.7660977 11.3326906 11.8297013 4.2041172 5.8852961 9.6954187 10.9318042 -1.6538090 10.7069845 5.2287802 5.9385940 4.9899927 10.0642421 11.5863325 9.9502272 11.1110090 12.5758575 8.9348520 10.6020512 9.9828571 10.5104159 11.4494252 5.1534933 11.7642536 9.7713533 NA 10.4866477 10.9067091 2.0410327 5.9159941 10.6097001 10.3090335 10.5088435 11.6381714 3.8379937 6.1143212 12.3183993 10.7257866 10.5907986 9.2849818 0.7305700 0.7604400 -0.0282180 0.5870400 0.1319500 0.8251000 0.2535500 -0.5303200 2.9461000 2.1843000 3.6569000 -0.0138150 -0.0223430 0.2459100 3.6569000 -0.2839400 -0.0098185 0.5973200 -0.1689100 2.2056000 0.0000000 1.2887000 0.2373600 0.8465200 -0.1863000 0.0279190 0.1431000 1.6105000 -0.0127130 -0.0127130 -0.1084100 -0.0919570 0.2039600 -0.1747400 0.5334600 0.2356900 0.2535500 -0.5303200 -0.2913000 -0.0843860 0.1993800 -0.9025900 -0.2678300 -0.2678300 -0.2678300 -0.0306770 -0.0223430 -0.0312230 0.0774300 -0.2888100 -0.3058400 -0.3058400 -0.0098185 0.5805900 0.5805900 -0.1689100 -0.3810000 -0.3810000 0.7991700 0.5861400 -0.6958000 0.8573900 -0.1191300 -0.1863000 0.1431000 0.1374600 0.1949700 -0.4929000 -0.4538300 0.000 0.000 -0.284 -0.284 0.597 0.597 -0.169 -0.381 0.000 0.586 0.586 -0.303 0.752 -0.222 -0.222 -0.186 0.000 0.000 0.726 0.198 1.327 0.195 -0.490 -0.108 -0.108 0.000 0.550 0.132 0.132 0.533 0.533 0.207 0.000 0.000 0.134 1.282 3.657 -0.237 0.000 0.169 0.169 0.000 0.000 -0.284 -0.284 0.597 0.597 -0.169 -0.381 0.000 0.586 0.586 -0.303 0.752 -0.222 -0.222 -0.186 0.000 0.000 0.726 0.198 1.327 0.195 -0.490 -0.108 -0.108 0.000 0.550 0.132 0.132 0.533 0.533 0.207 0.000 0.000 0.134 1.282 3.657 -0.237 0.000 0.169 0.169 7.97367154 NA 6.99718964 10.13158987 11.78609814 5.97753180 10.89471857 8.98602973 8.86943468 NA 10.92898508 12.80621763 8.58215177 -1.65380897 2.43360046 7.94605005 4.22878022 10.90024659 11.95520072 10.76820219 9.28865202 3.15349731 8.05866446 8.79528609 6.28277523 5.10102389 2.43360046 -1.65380897 11.56923412 6.59406478 6.64534572 8.39870565 5.31192084 10.92445112 10.75260820 3.39053012 9.14217702 -0.06884647 7.49842242 11.87520188 7.88141257 7.10436077 -1.65380897 7.25902668 8.55680874 3.30032876 3.15349731 NA 5.10102389 3.39793983 1.66807373 12.16711411 0.93107787 8.57013918 10.29158123 10.02781507 5.21650143 8.95254266 12.10311067 8.38779677 3.30032876 3.66806238 10.73764959 2.93109678 NA NA 4.15348921 16.1832891 5.6770543 9.0025622 12.6363003 9.6051274 10.6456317 12.7198862 12.4383165 8.5761578 11.0770321 12.5811793 9.3698917 9.6954187 9.0352618 0.6680283 7.9235664 12.3429640 10.883113 11.314624 8.822884 13.231166 8.840993 4.594065 9.628067 10.347999 10.210664 6.813743 9.765571 11.522622 7.813743 1.931116 9.927809 9.721177 9.525804 11.044191 9.615849 10.301424 7.949764 9.222654 12.364338 5.004349 10.572360 9.018563 9.835985 9.817813 10.850460 9.591690 10.758707 10.835484 9.371277 1.668074 8.873966 7.886595 10.931804 4.516059 10.706985 7.420279 10.294140 10.064242 8.210324 12.803967 10.422619 9.659020 12.226678 10.284247 -0.653809 5.968190 10.752608 10.084230 9.774498 TCGA-A8-A07Z 85 0 NA 1371 breast stage iia t2 n0 m0 female 2008 NA no infiltrating ductal carcinoma NA NA NA 1 1 2 NA 2 2 1 1 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4.508365e-07 1.733986e-07 15.7894736842105 10.5263157894737 5.26315789473684 31.5789473684211 36.8421052631579 8.73626188 9.23091941 11.52617863 8.89357396 8.45651007 8.48646339 10.69538247 10.08649838 10.56576547 14.79306818 9.35192112 10.68465606 -0.02532386 12.84777023 1.29666297 8.19629770 6.36702852 7.22737624 10.20292810 13.21281684 0.55963864 14.78402665 1.97471285 9.61661794 10.48646339 6.98593754 1.55968759 8.96481476 10.05152627 -1.02532386 8.70772597 6.45044422 NA 2.67516104 9.91722527 10.20533166 9.10270510 12.36635705 9.48250527 10.41454159 1.29666297 11.81194439 14.96795870 5.59059903 9.18172500 10.98488907 10.61676238 4.33226396 1.78207302 8.15213017 11.74640649 NA 10.52305094 4.40097504 3.78206253 5.60406836 10.01500044 11.51822589 10.37078024 11.81902414 12.04634065 8.89208284 10.38144713 9.98033526 10.51532305 10.96906413 5.72959899 10.82685002 12.09072970 -0.02532386 11.31149619 8.52737965 2.15104699 4.33226396 10.67037397 9.34103284 10.56108141 8.71786215 0.97467614 4.58942194 11.63604344 10.56810186 10.94193695 9.24850637 1.6427000 1.6802000 -0.0055375 -0.0055375 0.0000000 1.1136000 -0.0343590 0.0014152 -0.0178440 -0.0178440 -0.0112350 0.5727300 0.5949400 -0.0378980 -0.0378980 -0.0378980 1.0587000 1.0587000 -0.0510460 -0.0080244 -0.0479360 -0.0841300 -0.0841300 0.4161300 -0.0944600 -0.0944600 0.6691900 1.5843000 -0.0306770 -0.0306770 -0.0381700 -0.0055375 -0.0639720 0.0134920 1.1136000 1.1136000 -0.0405500 0.0014152 -0.0314960 -0.0239770 0.8425800 -0.0416880 0.9934300 0.9934300 0.9934300 0.9934300 0.5875700 0.5875700 -0.0378980 -0.0378980 -0.0241140 -0.0422450 1.0587000 1.0595000 1.0595000 -0.0073213 -0.0371840 -0.0371840 -0.0471240 -0.0591350 -0.0841300 -0.0841300 -0.0287160 -0.0944600 0.6691900 1.5843000 1.6790000 -0.0887720 -0.0887720 0.573 0.573 0.000 0.000 1.059 1.059 0.000 0.000 0.000 1.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.643 1.584 1.584 1.567 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.114 1.114 0.000 0.000 0.000 0.843 0.000 0.000 0.993 0.993 0.330 0.330 0.573 0.573 0.000 0.000 1.059 1.059 0.000 0.000 0.000 1.549 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.643 1.584 1.584 1.567 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.114 1.114 0.000 0.000 0.000 0.843 0.000 0.000 0.993 0.993 0.330 0.330 8.3300618 NA 6.8512281 11.4259218 11.9157583 7.7796484 11.8404440 8.1180939 10.3258652 2.4341345 11.3415793 11.6646323 2.2966336 5.8573540 -1.0253239 7.0408004 2.7820730 10.7149131 11.4549960 11.1039937 9.6612112 0.5596386 7.0832346 10.7617970 6.1345824 4.2601160 0.5596386 NA 10.0897543 2.9747128 4.3322640 7.5820411 5.4341411 10.9034696 10.3951973 3.4982764 9.7560704 NA 4.7295963 11.6609923 8.2966387 8.6664541 -1.0253239 4.8573540 8.5119289 NA 3.4341478 -1.0253239 4.0621735 4.4080053 2.4341345 11.3627280 1.9747128 6.2966391 10.2053317 9.8489237 4.7560679 9.9426574 13.2239723 7.9718901 1.2966630 3.4982764 11.0323641 1.5596876 NA 2.4341345 4.5293025 13.5254148 6.1446358 8.2368054 12.8477702 9.5359987 11.2038299 13.2128168 12.4896712 8.4565101 10.6122413 12.7314755 8.9803353 8.1521302 9.2391534 0.9746761 7.1295293 11.5528475 11.289294 12.647357 7.269331 13.630073 8.605888 4.559675 9.538860 8.374715 10.923939 6.762613 8.724580 9.351921 7.826460 -1.025324 9.322332 10.485475 9.077579 8.864975 10.210127 9.976119 9.003998 9.272773 12.305067 4.857354 9.176981 9.102705 11.077671 10.025240 12.538979 10.301140 9.293253 11.053195 8.917225 NA 9.614829 5.155017 11.746406 3.434148 10.523051 4.222635 11.223406 10.015000 7.124457 12.779749 10.821768 9.841217 12.305768 9.969064 3.559675 NA 9.713647 9.375590 9.315674 TCGA-A8-A081 80 0 NA 0 breast stage iia t2 n0 m0 female 2008 NA NA infiltrating ductal carcinoma NA NA NA 3 2 1 NA 1 2 2 2 2 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.011424e-06 4.855162e-07 23.6111111111111 29.1666666666667 2.77777777777778 22.2222222222222 22.2222222222222 10.1163609 9.5672861 11.7582146 10.4597620 8.8043702 9.7461408 9.4255229 9.7245715 9.1224325 14.1025628 11.4694539 10.7073950 5.9273821 13.8713986 4.6268713 7.6268720 4.2067604 8.6230705 8.9951258 13.0996590 2.3049490 12.9027515 1.8643744 9.2275924 10.7766192 7.2664699 -1.9428617 11.7568718 11.8284027 0.8643347 8.1824301 5.4748676 -1.9428617 4.6569311 10.8373511 11.2585278 9.7426412 10.1759574 10.1112815 11.7023371 13.6270500 11.3616529 14.3948822 8.4053351 9.4498490 11.3173479 12.4208774 5.4916447 8.5707441 9.7250150 10.3797896 NA 10.5033243 5.1014106 6.9118845 5.1655422 10.6733355 11.9833124 9.1464668 11.0357269 13.2285060 8.5458607 10.8404240 10.2605785 11.3463149 10.7496319 5.7080686 12.9932402 10.8276803 -0.3580841 10.0367988 8.7849368 3.1912310 5.3607962 10.6959048 10.2517733 10.1917636 10.6790683 0.6420084 7.7626485 12.1672550 10.5357861 10.5307222 8.5020314 0.057365 0.594750 0.051811 1.764100 -0.488880 -0.485020 -0.468340 -0.432570 3.656900 -1.064400 0.642860 -1.079800 0.078003 0.084495 2.039600 -0.501310 0.614250 0.614250 -0.495900 -0.376120 -0.490790 -0.530730 0.774630 0.774630 -0.088642 -0.088642 -0.088642 1.071600 -0.519180 -0.487010 0.018660 0.051811 -0.517950 -0.482290 -0.485020 -0.485020 -0.468340 0.377420 -0.467490 0.041172 0.041172 -1.074200 -1.065000 -1.061200 0.061648 0.061648 0.078003 0.014467 0.068811 0.361160 -0.501310 -0.501310 0.614250 -0.501940 0.018660 -0.490580 -0.390520 -0.424400 -0.478070 -0.547740 -0.530730 0.774630 -0.406060 -0.088642 -0.088642 0.777710 0.183740 0.023423 0.023423 0.000 0.000 0.000 -0.499 0.596 0.000 -0.491 -0.391 -0.479 0.104 -0.478 -0.531 0.771 -0.476 -0.476 0.000 0.000 -0.487 0.000 0.778 1.072 0.183 0.000 0.588 0.588 0.000 0.000 -0.489 -0.489 -0.485 -0.485 -0.420 -0.420 0.000 0.000 -1.074 0.556 -1.061 0.000 0.000 0.000 0.000 0.000 0.000 -0.499 0.596 0.000 -0.491 -0.391 -0.479 0.104 -0.478 -0.531 0.771 -0.476 -0.476 0.000 0.000 -0.487 0.000 0.778 1.072 0.183 0.000 0.588 0.588 0.000 0.000 -0.489 -0.489 -0.485 -0.485 -0.420 -0.420 0.000 0.000 -1.074 0.556 -1.061 0.000 0.000 0.000 7.59423502 2.05699963 6.41016300 10.09901768 11.82302759 6.68895802 10.25084969 8.88884612 8.82651544 0.05699963 11.73407534 12.70880136 4.18630246 NA 2.14447063 8.04570124 6.12310538 12.17214135 12.04196884 10.55461878 9.84899327 -0.35808410 8.06264091 9.96315546 7.71344151 2.30494904 1.86437436 -1.94286170 10.44395665 8.43747745 5.61160619 8.57861686 7.22443490 10.27994713 10.28673644 2.96389947 8.90172221 2.58057968 5.37894506 12.05172341 8.40131218 6.56481103 NA 8.79257233 9.15307266 6.30968189 9.95069717 1.22694004 7.30256947 5.70792505 3.86437436 10.91868490 4.70087246 9.88396211 10.15735022 9.25607515 5.58839683 10.01701827 14.20755704 8.71344116 7.29542090 4.12310331 10.50332428 0.86433474 NA -1.94286170 -0.35808410 15.0435453 6.2566880 9.2400314 13.8713986 9.9672843 11.2629623 13.0996590 11.5919272 8.6202125 11.5759043 12.1508466 7.4255231 9.7250150 6.9995310 -0.3580841 8.2858350 11.4071268 10.9755070 11.9106184 6.8835646 14.4720621 8.7232404 7.2294437 8.8859462 10.5400764 10.9622887 7.0199120 5.1862985 11.4694539 6.9818287 -1.9428617 10.8241663 8.8707975 7.9752089 11.0173804 10.3073148 10.7811039 8.8048570 8.9518343 12.2159416 8.0793840 11.2696405 9.7426412 10.3530723 10.4955484 11.0247830 8.0570164 10.7611362 10.8974009 8.9980640 0.3789555 8.8315483 6.8252005 10.3797896 7.8285059 10.5033243 4.5327471 10.0879938 10.6733355 7.6000482 12.6228325 9.9250673 10.1895161 13.0956782 10.6983908 3.5164439 8.4149532 10.4963278 10.0821560 9.8119038 TCGA-A8-A082 58 0 NA 549 breast stage iib t2 n1a m0 female 2008 NA no infiltrating ductal carcinoma NA NA NA 1 1 1 NA 2 2 1 1 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.733986e-07 50 18.75 6.25 18.75 6.25 10.2588016 9.9454438 12.1360940 10.4038642 7.8379432 8.5759174 10.7940909 9.7983098 10.4830096 14.3226887 11.7450020 10.8626374 1.0000000 12.3018391 2.6780719 9.5690961 5.2927817 7.8529976 8.2384047 12.7904300 0.6780719 14.0843766 0.6780719 10.3510762 10.8360504 7.5453506 -1.3219281 9.5827065 9.8728288 3.7224660 8.3905989 7.4594316 3.8073549 4.2630344 9.8195405 10.4773535 9.7628803 12.5483403 10.1517777 11.8551799 9.1282522 11.9654957 14.9719566 8.3140802 9.9507017 12.1184220 11.2998949 4.8678965 6.1456775 8.9436870 10.7628803 0.2630344 10.4994473 4.9818527 5.1538053 4.3219281 10.3566720 12.0829474 10.3500552 11.1525384 12.8907203 8.0356239 10.8838652 10.2565012 10.8385737 11.7019995 5.2172307 10.8486229 12.7382612 0.2630344 10.2592725 9.5857137 3.0007212 5.9541963 10.6596392 10.8558029 10.5853382 9.7807038 1.0000000 10.5898384 11.7890445 11.7548875 10.2914010 9.5282587 -0.00631020 -0.00631020 0.00000000 0.00000000 -0.00719580 0.00027728 -0.83009000 -0.84131000 3.65690000 3.65690000 0.80442000 -0.00056710 -0.00180140 0.80675000 3.65690000 -0.83793000 0.00305220 0.00305220 -0.01174900 0.01712400 0.00965800 0.01056400 0.01056400 0.01056400 -0.00885260 -0.00885260 -0.00885260 0.00944910 0.01391100 -0.00631020 -0.00719580 0.00000000 -0.00719580 -0.00719580 0.00027728 0.00027728 -0.83009000 -0.85005000 -0.00443120 0.01391100 0.00447880 -0.84483000 -0.00595220 -0.00595220 -0.00595220 -0.00595220 -0.00180140 -0.00511690 0.80675000 -0.82513000 -0.83793000 -0.83793000 0.00305220 0.00305220 0.00305220 -0.00429290 0.01405100 0.00555290 0.02230400 0.01894300 0.01056400 0.01056400 0.00402430 -0.00885260 -0.00885260 -0.78707000 0.00569190 0.00485790 0.00485790 0.000 0.000 -0.018 -0.825 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.812 3.657 0.000 0.000 0.000 0.000 0.000 0.000 -0.018 -0.825 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.812 3.657 0.000 0.000 0.000 0.000 7.9565214 NA 3.2016339 10.8217740 11.5286495 7.0531982 10.4631156 8.8513743 8.5369698 -1.3219281 11.7255367 12.1625978 6.3504972 -1.3219281 4.7865964 8.4934552 4.5849625 7.4854268 10.7885552 10.6010279 9.2374490 -1.3219281 7.7414670 9.2507721 4.5849625 3.6322682 NA -0.3219281 10.4737057 5.5728897 6.5046204 7.7333543 4.8278190 10.7960656 10.4379601 5.2016339 9.0757465 -0.3219281 7.1779178 12.7570566 8.7468502 7.0134623 NA 0.2630344 8.1739269 5.9634741 4.0703893 NA 1.2630344 4.2016339 3.3219281 10.5728897 0.6780719 5.2172307 9.7588894 9.8504994 3.3219281 9.1095695 11.7118390 7.8579810 NA 3.7655347 10.2186843 3.0000000 NA NA -1.3219281 17.904351 6.161888 8.217231 12.301839 10.414698 10.275193 12.790430 12.378295 8.357552 10.684398 12.001690 10.439623 8.943687 7.104337 1.678072 6.426265 12.261390 10.9212459 12.5764843 7.3957483 14.2104875 8.6146951 5.0874628 8.9212459 9.8354188 10.0051249 7.0312187 7.9092931 11.7450020 6.5728897 -1.3219281 10.1883416 10.6355368 8.5456904 11.1069555 9.1074786 10.9092931 9.5751610 9.6532034 12.1549447 1.0000000 10.2182775 9.7628803 10.1644042 9.0938137 12.1313425 10.3636967 10.0703893 10.7248549 9.1689228 -1.3219281 8.9239930 5.7099523 10.7628803 0.2630344 10.4994473 5.9909549 10.4594316 10.3566720 7.4296160 13.8163837 10.3522642 8.8579810 12.0902448 10.3527056 NA NA 10.5093791 10.6025133 9.8442350 TCGA-A8-A083 67 0 NA 0 breast stage iib t3 n0 m0 female 2008 NA NA infiltrating ductal carcinoma NA NA NA 1 1 3 NA 2 2 4 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 0 4.54545454545455 18.1818181818182 0 22.7272727272727 54.5454545454545 10.3192909 10.0356382 11.8027052 9.5196874 8.6030002 9.4787828 10.8293109 9.1472380 9.0947459 13.7027405 11.2099597 10.3341717 6.0209266 13.2554655 2.9131288 8.5227471 4.8495590 8.1239196 10.8919809 13.5252602 1.0551262 15.1486932 7.1558039 10.1847143 10.6169068 6.1844251 NA 10.6677797 10.7070902 NA 8.9961893 5.0775079 NA 2.7555713 9.6207196 9.7235833 11.8174198 11.3187042 10.1636660 10.3042550 4.0775079 11.4573543 14.1024998 8.8310893 10.1465736 12.1900491 11.2730993 2.1426095 9.1406141 8.6116475 12.1322076 -0.3599344 10.9318503 3.4814023 2.3030793 3.3030647 9.9843999 11.9446455 10.8158615 11.0291976 13.0051506 8.5688693 10.6730681 10.3558373 11.4593518 11.0102465 5.2048880 11.0956025 10.2866628 NA 10.3457364 8.9416002 4.2115807 3.1844231 10.7860362 10.2730993 9.9657843 9.2023465 1.8625109 8.8745222 12.4954917 10.8810941 10.1002186 9.7003497 0.81978000 0.81978000 0.00622260 0.00000000 0.00691800 0.81217000 0.00858800 0.00858800 -0.00487150 -0.00487150 -0.00487150 0.00205510 0.00205510 -0.00514810 -0.00514810 -0.00514810 -0.00085702 -0.00085702 -0.00099559 -0.00085702 0.00288790 -0.00002543 -0.00002543 -0.00002543 0.00344330 0.00344330 0.00344330 0.78973000 0.00344330 -0.83963000 -0.00057986 0.00000000 0.00691800 -0.00302220 0.81217000 0.81217000 0.00858800 0.00858800 0.00858800 -0.00708300 -0.84445000 -0.00210380 0.00025184 0.00025184 0.00025184 -0.00638360 0.00205510 0.00205510 -0.00514810 -0.00514810 -0.00514810 -0.00514810 -0.00085702 -0.00085702 -0.00085702 -0.00099559 -0.00085702 -0.00085702 -0.00138530 -0.86642000 -0.00002543 -0.00002543 -0.00625400 0.00344330 0.00344330 0.78569000 -0.00666850 -0.00487150 -0.00487150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.823 0.823 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.816 0.791 0.791 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.812 0.812 0.000 0.000 0.000 -0.828 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.823 0.823 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.816 0.791 0.791 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.812 0.812 0.000 0.000 0.000 -0.828 0.000 0.000 0.000 0.000 0.000 0.000 8.8381396 NA 5.8495565 11.0377787 11.6601580 7.0358812 11.7667010 6.4921031 9.4708833 NA 10.2272565 10.9555858 2.2250589 3.3770682 -0.3599344 8.4549536 0.3770682 10.8166928 11.3680245 10.8491512 9.1978868 8.0649701 8.0635704 9.9884634 5.1740828 2.8624911 NA -0.3599344 10.9459758 6.6771939 8.4698270 8.0968005 4.0995393 11.2009384 10.4565544 2.6989963 7.8446750 NA 7.2150126 13.0922595 9.9803251 7.6438562 NA 8.0151435 8.4655929 NA 2.5786972 -1.9450821 2.5786972 6.5858203 -1.9450821 9.8282807 NA 5.4214623 10.2818548 9.5693625 6.1426054 9.2688533 13.7485741 6.7061935 2.2250589 0.3770682 12.5189213 2.0551262 -1.9450821 2.2250589 0.8625109 13.78435707 4.09953928 8.56985561 13.25546547 10.42310225 10.74732110 13.52526020 12.58219087 9.45233495 10.49627019 12.93959829 8.47193894 8.61164749 8.34516038 0.05519565 8.11177939 11.09491739 11.20330034 11.92887401 9.66108401 12.62997157 8.93242560 2.96203071 8.97921167 7.99912172 10.07306694 4.64010608 8.43235189 11.20995968 4.76938563 NA 10.90532841 6.18442511 6.42983352 8.12257592 9.89158642 10.52986154 9.78178541 8.58164086 12.98587889 2.14260949 12.21959443 11.81741976 10.51994255 9.88961256 11.66119970 8.72756688 7.70798646 10.69425610 9.29831556 NA 9.81537081 4.89182258 12.13220759 1.05512623 10.93185034 4.54699321 10.43397824 9.98439994 6.90150894 13.85621834 10.42201019 10.64268470 12.81825016 9.84793178 0.05519565 NA 9.27612441 10.65365937 9.90141541 TCGA-A8-A084 81 0 NA 458 breast stage iib t2 n1a m0 female 2007 NA yes infiltrating ductal carcinoma NA NA NA 1 2 2 NA 5 3 2 2 6 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 1.664627e-06 2.774378e-07 19.2982456140351 40.3508771929825 1.75438596491228 14.0350877192982 24.5614035087719 10.289413 9.523477 12.077146 9.771524 7.771524 9.865431 11.118011 9.918283 11.108692 13.604683 10.872889 10.728436 2.436775 12.479311 2.716881 9.268758 6.129262 8.545297 10.892980 13.209911 NA 13.466454 8.080628 9.105151 11.019855 8.589419 0.951364 8.055682 10.470588 2.088854 8.505934 6.924038 1.436748 3.088854 10.686394 10.266042 9.250553 11.875118 10.198798 11.949230 9.050430 11.280469 15.235432 8.967652 10.266037 11.163963 10.817079 3.273277 4.779165 8.338501 12.482824 NA 10.836126 4.357341 4.877347 4.512063 10.485843 12.257521 10.229795 11.912216 13.087952 8.296529 10.163234 9.613259 11.754346 11.341084 3.914823 12.097023 9.467045 -1.370713 10.280917 9.038808 3.490878 4.799341 8.260594 10.378868 10.043574 9.588695 0.951364 10.150036 13.251126 11.501322 10.038808 9.866029 0.9043200 2.0999000 0.9279700 0.0291840 -0.4487800 -0.4159700 0.0280280 1.7125000 -0.0952520 -0.0952520 -0.0952520 -0.4191500 -0.0910230 0.0448570 0.0306910 0.0306910 0.0291360 0.0130740 0.0044411 0.0332670 -0.8682400 -0.8534500 -0.8534500 -0.8534500 0.0045800 0.0045800 -0.0393940 0.0891270 -0.3905100 -0.3905100 -0.0045695 0.0493980 -0.4250600 -0.4487800 -0.4159700 -0.4223300 0.0280280 0.0221990 0.0063871 0.0052749 0.0000000 -0.3441700 0.0181030 0.0181030 0.0181030 0.0181030 -0.4454000 -0.4523800 0.0448570 0.0306910 0.0306910 0.0535210 0.0291360 0.0329860 0.0558910 0.0044411 0.0332670 0.0363700 -0.3929700 -0.7250900 -0.8534500 -0.8534500 -0.9207900 0.0045800 -0.0588690 0.0774300 0.0115140 -0.2363100 -0.2562400 -0.419 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 -0.393 0.250 -0.475 -0.853 -0.853 -0.409 -0.409 0.000 0.000 -0.391 2.100 0.000 0.000 0.000 -0.236 0.000 0.000 0.000 0.000 -0.427 -0.427 -0.416 -0.416 0.000 0.000 0.000 0.000 -0.249 0.000 0.000 0.000 -0.551 -0.265 -0.419 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 -0.393 0.250 -0.475 -0.853 -0.853 -0.409 -0.409 0.000 0.000 -0.391 2.100 0.000 0.000 0.000 -0.236 0.000 0.000 0.000 0.000 -0.427 -0.427 -0.416 -0.416 0.000 0.000 0.000 0.000 -0.249 0.000 0.000 0.000 -0.551 -0.265 7.499782 7.524235 3.838871 10.722174 11.604728 6.092205 11.964389 7.809476 8.686055 NA 10.282710 11.095731 1.799336 1.799336 2.088854 8.090897 2.214374 11.847980 11.816460 10.994646 9.214380 5.105150 9.096004 9.577784 5.072359 3.758698 4.410775 NA 11.561263 3.487396 8.172449 8.522719 8.771524 11.139882 10.762238 2.214374 9.130259 NA 7.724814 11.554601 8.296529 6.794324 NA 7.681985 7.882082 5.499782 3.629415 NA 2.436775 4.442174 1.951327 10.590505 1.799336 5.301844 10.928339 9.773438 2.214374 10.159824 14.627919 6.184006 2.214374 2.536302 10.453978 4.384305 NA 2.214374 1.436748 13.2219385 6.3708844 7.8266336 12.4793109 10.4760829 11.5156854 13.2099113 11.4660594 8.9953460 10.7993422 13.0687936 7.1252719 8.3385011 7.7817020 -0.3705268 5.7483593 12.3102162 11.3049332 13.3416755 8.5616320 14.1248032 9.0066276 2.7993360 9.1685761 8.4827269 11.0265303 4.9513453 8.3725687 10.8728888 6.0723610 0.2143735 11.0201236 6.0044564 8.9381317 10.4551710 11.0777917 10.7599878 8.3725687 9.4222076 11.5874261 3.4873963 11.3461595 9.2505533 10.7218440 9.9360485 11.4581488 9.5280186 9.9957395 10.8609384 9.3641268 0.6293799 9.9675463 6.2732734 12.4828242 2.9513453 10.8361264 7.5332994 10.6697069 10.4858427 7.3367761 12.6005116 10.0302966 10.7823357 12.2183660 10.8582359 -1.3707133 NA 10.4970821 10.3963601 10.0179727 TCGA-A8-A085 44 0 NA 1124 breast stage iib t2 n1a m0 male 2008 NA no infiltrating ductal carcinoma NA NA NA 1 1 1 NA 2 2 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.595268e-06 4.855162e-07 3.2258064516129 27.4193548387097 6.45161290322581 35.4838709677419 27.4193548387097 10.57970004 9.94239677 12.23900125 9.77888386 9.09914316 8.98811175 10.85129516 9.76732159 9.48429425 14.62219337 10.67794343 10.91862394 0.27381424 13.10287547 3.83457976 8.12686396 4.92921816 8.64803647 9.21755330 13.08744713 -0.04811385 13.98944228 -0.46315135 9.14147877 10.47255692 6.23734000 -0.04811385 7.03142277 9.60298997 1.41137201 7.81147296 7.34640115 NA 5.91194080 9.25799992 10.53266791 9.54905958 11.84912193 10.08475923 11.42018041 1.85881652 12.57576258 14.61224060 8.08976189 9.83113858 10.81612439 11.29706620 4.37820641 4.77211791 9.01802738 10.50340618 -1.04811385 11.31894336 5.16139192 2.70681785 5.62436414 8.97499958 11.92787576 9.83953970 11.90813284 12.69240416 8.30066646 11.07298604 10.66618378 11.03691263 11.41852456 5.19034226 12.74919444 13.36880172 2.27387391 9.64673132 8.79350252 3.12985998 2.99633451 10.20903134 9.61771833 11.30880283 10.30618761 2.03938409 10.70745180 10.93849135 10.53924694 9.88304508 9.60657418 -0.0018173 0.7786600 -0.0020943 0.1451600 0.0047030 0.0134760 -0.0028625 -0.8560000 0.0072057 0.0072057 0.8254700 -0.0011247 0.0040653 0.0161300 0.7472500 0.0148720 -0.8648500 -0.0026481 -0.8503700 0.0158500 0.8087300 -0.8796200 -0.0506560 2.7660000 1.3223000 -0.0697490 -0.0697490 0.8174500 -0.0666690 -0.0018173 0.0164090 -0.0020943 -0.8796500 0.8180300 0.0134760 0.0134760 -0.0028625 0.0052589 -0.0196050 0.0123600 0.0083191 -0.8518700 -0.0153450 -0.0153450 -0.0045854 -0.0163070 0.0040653 0.0187870 -0.8599600 0.0161300 -0.8502800 0.0338150 -0.8648500 -0.0096964 -0.0096964 -0.8384200 -0.8620300 0.0010934 0.0027586 -0.8755700 -0.8796200 0.7096200 -0.8775200 -0.9130500 -0.0697490 0.0000000 -0.0022328 -0.0441600 -0.8793900 0.000 0.000 0.000 0.000 0.000 0.000 -0.850 0.000 0.000 0.763 0.000 -0.801 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.835 0.000 0.000 0.000 0.000 -0.849 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.852 0.000 0.000 0.000 -1.293 -1.293 0.000 0.000 0.000 0.000 0.000 0.000 -0.850 0.000 0.000 0.763 0.000 -0.801 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.835 0.000 0.000 0.000 0.000 -0.849 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.852 0.000 0.000 0.000 -1.293 -1.293 7.95756293 NA 5.19986469 10.22194147 12.34042646 5.44651430 10.72239566 8.50430973 8.41393928 NA 10.48672744 11.62664360 5.16139192 3.75929434 4.65237750 7.50268464 3.03940164 8.46566598 11.94850000 10.49255063 9.36873583 NA 8.02205927 10.28900261 6.89445280 1.27387391 1.53689837 -1.04811385 10.14299742 3.85882647 5.63141864 8.16868415 5.31825899 10.52079928 10.38082175 1.53689837 9.31935307 NA 6.09149040 11.79742828 9.36503721 8.00992992 NA 7.80991922 8.41341764 2.27387391 3.47549999 -0.46315135 -0.04811385 4.75929434 -0.46315135 10.40314936 NA 4.70682337 10.64868851 9.73534582 3.53689837 9.57855988 11.04419983 6.17593971 0.53694809 3.16138789 10.95369826 4.94062251 NA 0.53694809 0.53694809 14.487894 6.365567 8.445794 13.102875 9.225151 10.386045 13.087447 14.077029 8.990116 10.282855 11.926174 11.424121 9.018027 9.251146 2.273874 8.391769 12.120062 11.18300935 12.11653095 7.03408693 13.20700186 8.99701516 -0.04811385 6.41546292 9.79114205 10.84578577 4.29178771 4.59579604 10.67794343 6.81302566 -1.04811385 10.48867115 4.08122031 8.21838499 10.57421885 9.32534728 10.49061215 7.27136218 8.64803647 15.10791264 -2.04811385 12.71368630 9.54905958 9.41546271 9.88452207 9.17171173 9.79585930 11.14315168 10.78739655 8.83381703 NA 8.64927953 6.10122774 10.50340618 2.03938409 11.31894336 7.94062310 10.82326596 8.97499958 7.55185127 13.32789399 10.60007105 9.52936711 12.27618912 10.01263418 NA NA 10.83725326 10.41546260 10.31497788 TCGA-A8-A086 59 0 NA 396 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 1 1 NA 2 2 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 2.080784e-07 37.5 6.25 0 43.75 12.5 10.77762486 10.36267305 11.52247968 9.67849275 9.26967770 8.72505297 9.87374908 9.38543600 9.26015013 12.97538975 11.67863033 10.24870750 -1.67807191 12.07337565 3.99446206 10.27040805 5.66189208 8.29502042 8.28493697 12.22723976 3.22892641 13.37052768 2.32204351 9.12214802 11.10810616 3.36643413 -1.67807191 9.22781880 9.79422398 1.64394852 8.22290742 8.15493099 -0.09295553 4.27623609 9.43448041 10.14182079 9.56402389 10.55506120 9.77376710 11.25166910 3.18002052 11.35288032 14.93515400 8.10731334 9.70628499 10.80333571 11.38661520 4.40950635 0.90696754 9.35683972 11.83206315 1.12941491 11.31851428 5.57942758 5.37732160 5.18002052 9.96092925 12.00996319 10.32661240 12.50296006 12.50156118 7.83576810 11.54453388 11.38051458 11.00262011 11.11787754 5.04996178 11.77556868 12.38636257 -0.09295553 10.35752726 10.63605749 1.76829021 5.66189208 10.65099615 9.70898108 10.52905509 11.41809706 3.87662499 7.31356240 12.13451899 11.02161325 9.92288287 9.08276086 -0.00691950 -0.00512270 -0.00664320 -0.00664320 -0.00910950 0.68645000 -0.00456950 -0.00456950 3.65690000 3.65690000 3.58580000 0.00666530 0.00666530 -0.00263220 3.05670000 3.05670000 -0.00290910 -0.00290910 -0.78503000 0.00485790 0.02104300 0.72716000 0.72716000 0.72716000 0.02272500 0.02272500 0.02272500 0.69335000 0.02132300 -0.00691950 0.00027728 -0.00664320 -0.00910950 -0.00553750 -0.01684100 0.69970000 -0.00456950 -0.00456950 -0.00456950 -0.01037000 -0.00747200 -0.76757000 -0.01428600 -0.01428600 0.00000000 0.01228700 0.00666530 0.00666530 -0.76544000 -0.81112000 -0.76689000 -0.76689000 -0.00290910 -0.00290910 -0.00290910 -0.75305000 0.00485790 0.00485790 -0.01721100 -0.75037000 -0.73722000 0.72716000 0.78157000 0.02272500 0.02272500 0.69335000 -0.00871460 -0.01849000 -0.01849000 0.000 0.000 0.000 0.000 0.000 0.000 -0.753 0.000 0.000 0.677 -0.717 -0.010 0.727 0.782 0.782 0.000 0.000 0.000 0.000 0.693 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 0.686 0.000 0.000 0.000 0.000 2.889 3.657 0.000 0.000 0.122 0.122 0.000 0.000 0.000 0.000 0.000 0.000 -0.753 0.000 0.000 0.677 -0.717 -0.010 0.727 0.782 0.782 0.000 0.000 0.000 0.000 0.693 0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 0.686 0.000 0.000 0.000 0.000 2.889 3.657 0.000 0.000 0.122 0.122 8.36916458 -1.67807191 4.95139663 10.23829355 11.28258581 7.86183939 9.77993468 8.50639566 8.10110375 NA 11.46685833 11.55150107 10.59408737 2.49195568 3.81389404 8.06855527 3.67959270 10.23080872 11.27332554 9.99623309 9.17378980 -0.67807191 7.29070730 9.68562799 5.72291953 5.24090579 2.84561048 NA 11.04142966 4.76498302 6.39350372 9.29860494 6.26455520 10.26830011 10.28421382 3.96589508 8.70682441 -0.67807191 6.90324198 12.68966031 8.15651190 7.29645557 -0.67807191 6.99092537 8.04825908 NA 4.10339692 NA 2.22894180 5.69168211 2.02247435 10.35029225 -0.67807191 7.22592270 10.21610062 9.61436238 3.90700601 8.74515664 12.38543589 7.89568797 1.49195568 3.53149375 13.67684115 4.27623609 -1.67807191 -0.09295553 3.74830021 15.707564 5.821886 8.158091 12.073376 9.266753 10.080680 12.227240 13.030963 10.778968 10.689456 12.440414 11.444384 9.356840 9.165962 2.643972 7.750401 11.302537 11.2453683 11.6649489 7.1517635 13.5087350 8.6177984 5.0362879 9.0893978 9.8048488 10.1302931 6.3609594 8.6949060 11.6786303 6.3988565 2.3220435 10.2960968 6.3609594 7.6630706 11.2705906 9.6160871 10.2468533 9.9454651 8.7886270 13.0837998 3.5314938 10.8236069 9.5640239 10.4477771 8.9855989 11.6849435 9.8253697 10.7464696 10.4841174 8.8852370 NA 8.6325172 6.9694993 11.8320632 4.1293984 11.3185143 8.4819120 10.2031548 9.9609292 7.4615924 14.0206098 10.3171013 9.7084423 12.5450621 10.0525110 0.3220435 3.6795927 10.8775886 10.2107841 9.6535176 TCGA-A8-A08A 89 0 NA 30 breast stage i t1c n0 m0 female 2007 NA NA infiltrating ductal carcinoma NA NA NA 1 1 3 NA 2 2 4 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 27.2727272727273 0 0 50 22.7272727272727 9.3089296 9.4816866 11.8429378 9.2432647 8.1182818 9.4439621 10.9403215 9.3630420 10.8373854 12.8820475 11.2447713 10.1276440 3.1182767 13.1407075 3.8187177 9.2484234 7.3503028 7.6881377 10.8181435 13.4587811 0.1182268 14.0075957 6.3975052 9.5953722 10.4209208 8.3471004 0.5333640 13.3735087 10.8285143 1.7032336 8.5459441 6.9762628 NA 2.9927503 9.4991036 10.6438027 10.0075323 11.4252929 10.2969467 10.7910018 4.4875185 11.2728890 15.0417177 8.0694696 9.9464184 11.4009842 11.0556557 4.1182850 0.8552722 8.0666489 10.3940185 NA 9.0341612 4.1771763 5.6522599 4.9256387 10.0450720 11.5050425 10.4911469 12.1075581 12.5765176 8.8798332 10.5892796 10.6873653 10.8848108 10.9519626 5.0724789 11.8977276 10.3889666 -0.4667357 10.3309809 8.6626025 2.7128379 5.1182808 11.2413255 9.9988858 10.4140508 9.5220041 -1.4667357 6.8776154 13.2627277 11.1917540 10.3027440 9.9293889 1.32790000 1.32790000 -0.00221680 -0.00221680 0.00000000 -0.00041585 -0.00733390 -0.00733390 0.00889200 0.00889200 0.00083195 -0.00456950 0.00763920 0.01297500 0.01297500 0.01297500 0.00000000 0.00000000 0.00180300 0.00249690 0.00958830 -0.00429290 -0.00429290 -0.00429290 -0.01752900 -0.01752900 -0.02812400 0.01768400 -0.00394740 -0.00373950 -0.00387790 -0.00221680 -0.04265500 -0.00861380 -0.00041585 -0.00041585 0.01098200 -0.00733390 -0.00456950 0.00374650 0.00374650 0.00889200 0.00471900 0.00471900 0.00471900 -0.00468980 0.00763920 0.02623300 -0.70899000 0.01297500 -0.70935000 -0.70935000 0.00000000 0.00000000 0.00000000 0.00180300 0.00249690 0.00249690 0.00958830 0.70251000 -0.00429290 -0.00429290 0.01042400 -0.01752900 -0.02812400 0.01768400 -0.00072972 0.00875280 0.00875280 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.689 -0.012 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.328 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.689 -0.012 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.328 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5487345 NA 5.8187228 11.0148666 12.0101921 7.4087000 12.3740973 7.6586557 9.2561268 NA 11.5143514 11.3954646 3.7812443 6.1257771 1.9927684 8.1332321 7.1663148 10.1572009 11.2898757 10.5255497 9.4772993 6.4036836 7.1590287 10.8184325 6.1406498 5.2747872 0.8552722 NA 9.9154030 4.3913003 5.1332306 8.2561271 4.0251706 10.6836506 10.5546464 5.6313517 9.0141095 NA 7.3944061 12.9858824 8.3534984 7.4251034 -1.4667357 1.5333142 8.6728708 -1.4667357 4.9083566 1.1182933 3.9595847 6.1546379 2.6207741 10.8544019 0.5333640 4.4875185 10.6421705 9.5556871 4.2612374 9.6906662 12.0941299 8.3803766 2.9256387 4.5333204 10.8425115 3.1182767 0.1182268 3.3913003 2.2337654 13.074753 4.742772 9.302331 13.140707 10.109331 11.378613 13.458781 13.105724 9.060796 10.435695 13.235276 9.998375 8.066649 9.900188 1.118293 6.588602 10.921337 11.1959877 12.3089297 8.0049946 13.7406346 8.6496632 5.5886007 9.0617735 8.0371450 10.0906874 7.6856045 9.2535636 11.2447713 7.1257761 6.1915311 10.3386602 7.0724778 7.8341752 10.7880528 10.1017505 10.3594705 8.9384608 8.0705380 12.9084267 4.6830676 9.9985133 10.0075323 10.4454602 10.2402471 11.5141730 9.8410894 10.1498683 10.7185045 8.3835060 0.1182268 9.0041308 6.0490186 10.3940185 3.2882109 9.0341612 7.1626763 10.5098834 10.0450720 7.3015035 13.9700960 10.1494086 9.4521825 12.5082716 10.5591511 NA NA 10.0695666 9.9871044 9.5473399 TCGA-A8-A08B 52 0 NA 1156 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 3 2 4 NA NA NA 5 2 6 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 4.161568e-07 23.0769230769231 46.1538461538462 3.84615384615385 15.3846153846154 11.5384615384615 9.819716 9.791232 10.799836 8.446835 8.006001 8.950409 9.933566 9.304942 10.357373 12.905104 11.219335 9.844880 2.143067 16.528714 5.213444 8.903275 6.786910 7.843494 11.264588 12.713100 2.821118 13.372954 8.049945 9.757602 11.433534 5.549047 3.143051 10.438594 11.745567 NA 7.187448 7.589310 NA NA 9.495318 9.947831 8.538802 10.846958 9.833751 10.734763 11.470831 10.887215 14.964031 8.095201 10.378590 10.083221 12.481568 4.865518 NA 8.903275 11.518094 NA 10.657176 4.775325 4.950408 5.549047 10.253668 12.092881 10.213444 10.751124 12.699177 6.087913 10.193991 9.811230 10.931609 10.269242 5.728016 12.383368 11.134009 NA 9.811230 8.973411 2.991046 5.178679 7.775323 9.900611 9.314982 8.725008 5.679106 10.153163 12.861587 11.604943 9.570995 9.059531 0.973580 1.491100 -0.105390 0.179660 -0.560470 0.215760 0.578620 0.612080 -0.039394 -0.039394 3.656900 0.555330 0.815910 0.321570 0.321570 0.321570 0.000000 0.434630 -0.190740 0.379900 0.297400 -0.584120 3.656900 -0.580380 0.010564 0.010564 -0.221820 0.455470 -0.118870 -0.118870 -0.120820 -0.563660 -0.575550 -0.548540 0.073833 0.073833 0.580590 0.612080 -0.587840 -0.114950 -0.102990 -0.039394 0.151590 0.151590 0.151590 0.151590 0.227000 0.227000 0.321570 0.321570 0.321570 0.321570 0.000000 -0.558670 -0.558670 -0.194120 0.323340 0.323340 0.297400 -0.586090 -0.584120 -0.589480 -0.554570 0.139540 -0.221820 0.455470 0.296120 0.273950 0.273950 0.555 0.227 0.322 0.322 0.000 0.000 -0.194 0.323 0.297 0.608 -0.567 -0.580 -0.580 -0.555 -0.555 0.000 0.000 -0.119 0.855 0.455 0.455 0.296 0.274 -0.102 -0.102 0.165 0.270 -0.560 -0.560 0.216 0.000 0.612 0.612 -0.103 -0.103 0.000 0.000 0.152 0.152 0.289 0.289 0.555 0.227 0.322 0.322 0.000 0.000 -0.194 0.323 0.297 0.608 -0.567 -0.580 -0.580 -0.555 -0.555 0.000 0.000 -0.119 0.855 0.455 0.455 0.296 0.274 -0.102 -0.102 0.165 0.270 -0.560 -0.560 0.216 0.000 0.612 0.612 -0.103 -0.103 0.000 0.000 0.152 0.152 0.289 0.289 8.6571762 5.8655205 NA 10.3486030 10.7629073 4.6585657 10.8865421 6.5258590 7.2204683 NA 12.1007366 11.0299700 1.8211387 NA 2.6284703 8.0595310 2.9910456 11.8358440 11.1351427 10.7340154 10.1609760 6.0109499 7.6024858 9.6187876 6.2305162 2.8211183 NA NA 10.2723371 5.7518627 6.3289208 8.1609761 7.6476743 10.0695636 10.0867410 1.4061012 8.9032751 3.2805555 5.2805592 12.5755960 7.8925884 5.5490469 NA 5.2805592 8.2091433 NA -0.1788613 1.8211387 4.6284820 6.3909823 -0.1788613 10.4486599 NA 7.0690534 10.9452473 9.5146131 5.0305789 9.9165231 14.3438915 6.5215659 4.4060876 NA 10.1753754 NA NA NA 2.6284703 12.124855 4.406088 7.685312 16.528714 10.097250 11.339779 12.713100 10.534513 9.320972 10.217731 12.976577 10.981628 8.903275 8.493551 3.280556 7.078514 10.686859 10.9152037 12.4634034 3.9910547 13.3030352 9.1180422 4.6284820 7.9452472 8.4504826 10.0915499 6.0690534 6.3129791 11.2193353 5.4935513 0.8211387 10.6907199 6.1961664 7.2425177 10.4658837 9.3249519 11.5336530 7.1520424 8.5859976 11.1836178 6.9809975 13.2602777 8.5388024 10.5950894 9.2866924 9.8831722 8.6090287 10.8709746 10.3029255 8.3757150 10.1340090 8.1426483 8.1475555 11.5180936 6.9085884 10.6571764 4.2134406 10.3229632 10.2536680 8.0925891 14.2381214 9.9085888 10.6814371 12.3294160 10.7444535 4.2134406 NA 9.9204739 10.5893103 9.0109507 TCGA-A8-A08C 65 0 NA 881 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 1 1 5 NA NA NA 4 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11.5159694 9.9971957 11.9086046 10.1155383 8.2722897 9.7870999 10.1914532 8.5541625 9.5741691 11.5127963 11.2039334 10.3941948 3.3447149 12.8850311 5.8215240 8.4739922 9.2699175 7.9574550 12.5132142 13.2193320 1.7597524 14.3783846 4.7776669 9.2168567 11.3316889 6.5875660 -1.5623461 11.9151975 8.9416445 2.3447149 8.1278164 6.8215227 NA 3.1382575 9.8290623 11.3594737 9.9890463 11.2123998 10.9798832 11.7691555 6.0451481 12.7201108 14.7576848 8.6215658 9.5862953 11.6628754 11.8329511 4.1382575 -1.5623461 9.8577789 10.1049302 -0.5621331 10.9069517 3.4822158 4.9456124 4.4822158 10.2623797 11.7162681 10.7304278 13.3788204 12.9873627 8.0133579 11.5728866 11.4451473 11.2338582 11.5299151 5.0525289 13.0999863 10.9572092 6.8682707 10.0543674 9.5272692 3.0275787 4.9924059 11.5314012 10.5961128 10.3563092 10.8109557 NA 8.7732091 12.2125028 10.2926870 10.5242866 9.4043241 2.73970000 2.76240000 0.89464000 0.84097000 -0.08657400 -0.05902300 0.77172000 0.71958000 0.84846000 0.84846000 0.84846000 -0.02605300 -0.02605300 -0.02523200 -0.02523200 -0.02523200 -0.03724100 -0.03724100 -0.05983000 -0.02988000 0.00914700 0.02172000 0.02172000 0.02172000 0.04639300 0.04639300 0.04639300 0.02709300 0.00233470 -0.05052800 -0.03639300 0.89464000 -0.04944700 -0.08657400 -0.05902300 -0.07161200 0.77172000 0.71958000 0.71958000 0.67540000 0.66731000 0.84846000 0.72335000 0.72335000 0.72335000 0.78270000 -0.02605300 -0.02605300 -0.02523200 -0.02523200 -0.02523200 -0.02523200 -0.03724100 -0.03724100 -0.03724100 -0.05983000 -0.02988000 -0.02988000 0.00000000 -0.94013000 0.02172000 0.02172000 0.81213000 0.04639300 0.04639300 -0.00030058 -0.02743100 0.04299100 0.03408900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.001 -0.987 0.000 0.000 0.834 0.834 0.000 0.000 2.674 2.674 0.000 0.000 0.000 0.000 0.000 0.000 0.868 0.868 0.000 0.000 0.000 0.000 0.737 0.737 0.675 0.675 0.848 0.848 0.723 0.723 0.265 0.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.001 -0.987 0.000 0.000 0.834 0.834 0.000 0.000 2.674 2.674 0.000 0.000 0.000 0.000 0.000 0.000 0.868 0.868 0.000 0.000 0.000 0.000 0.737 0.737 0.675 0.675 0.848 0.848 0.723 0.723 0.265 0.265 7.9554878 NA 4.9613826 10.8169262 11.6681393 7.3561156 12.3017145 7.4352519 8.3847686 NA 12.2153822 10.8018849 0.0227584 1.4378136 4.0816720 8.1792856 2.1382575 10.5022246 11.3225616 11.7948208 9.8530322 8.7127791 7.3626312 10.2683338 5.0227806 5.5039084 -1.5623461 NA 11.2577981 3.0227761 5.0227806 9.0789673 5.4490463 10.3497873 11.4688306 4.2957965 8.2403348 NA 8.5424175 12.9678591 7.8171973 6.7642479 -0.5621331 1.2451914 9.0171347 0.4378669 4.1382575 NA 3.7953721 5.5976891 2.0227939 10.2113700 NA 5.8807614 11.0444552 9.6575921 3.2451762 8.4064852 12.0793060 7.3715092 2.3447149 2.0227939 11.2107518 1.6077209 -0.5621331 3.2451762 -0.5621331 13.4819275 2.8972598 9.0086230 12.8850311 10.3412675 11.4973321 13.2193320 13.8242874 9.5025613 10.9413960 13.5801651 11.3114550 9.8577789 8.8161136 0.7597524 7.3655963 10.5176367 11.2903481 11.6962375 4.2451762 13.3856797 9.0038726 4.3685588 9.0180772 8.0095711 11.3608136 5.8640846 8.1708339 11.2039334 5.6569882 -1.5623461 10.9837484 9.6678391 5.0828303 11.0607856 10.2876146 11.0630708 8.6509228 7.6423897 14.8107687 3.3920151 9.7261945 9.9890463 10.4715858 9.9928871 11.4217029 9.9211306 10.2277597 11.0347072 9.7815595 0.0227584 9.1802543 5.7776696 10.1049302 0.0227584 10.9069517 6.6618208 11.2257783 10.2623797 7.6738327 13.8052334 9.9226415 10.3124158 13.0019086 10.0960301 NA NA 10.4995273 10.9418927 10.9153239 TCGA-A8-A08F 59 0 NA 1004 breast stage iiic t2 n3a m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 3 2 4 NA NA NA 1 2 NA NA NA NA 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.635659e-06 7.976338e-07 9.09090909090909 11.1111111111111 4.04040404040404 35.3535353535354 40.4040404040404 9.8236437 9.6329307 12.1457071 9.4521525 9.7169367 9.5786314 9.8517882 9.6702866 9.6740446 14.2926096 10.0510542 11.2610074 3.0135873 12.6581948 2.2250898 9.0591235 4.9944711 7.8767877 5.3048104 12.2422716 NA 13.0911682 6.0040564 10.2223658 11.0242180 7.6963896 3.0875816 9.8270232 11.0864525 3.5730109 7.8819961 7.0088264 NA 3.8531174 9.6244100 10.2474514 9.6360166 9.4910183 9.9640971 11.7348586 -0.2342955 11.4036353 14.8616052 8.6529944 9.8018255 11.5073296 9.4773189 5.5338374 7.3950088 8.9787562 9.7761800 NA 10.1892932 8.2615068 7.0324381 6.0694337 8.8570874 11.8407968 10.1792799 10.6364019 12.8673815 8.7443623 9.9896536 9.7970086 10.9729714 11.1439469 5.3655631 11.0645737 11.0719985 -0.2342955 10.5874259 9.7198483 2.3518262 6.0785351 10.0937659 9.9842152 11.1782218 10.1808656 0.3506104 8.5953746 11.6018996 10.4171522 9.8975089 9.4755973 0.07124800 1.22510000 0.42084000 0.51856000 -0.44232000 0.86553000 0.44392000 -0.44262000 3.08270000 1.07900000 2.00670000 0.82823000 -0.45511000 -0.45168000 1.33690000 0.81825000 -0.50743000 3.65690000 -0.97551000 0.66456000 0.47512000 -0.51094000 0.25246000 1.53940000 0.18616000 -0.08956700 0.56418000 1.01380000 -0.52215000 0.07124800 0.09984900 0.45825000 -0.47756000 -0.49965000 -0.50238000 -0.46449000 0.44392000 -0.42025000 -0.01986300 -0.38313000 0.76083000 -0.90434000 -0.00152430 -0.46174000 -0.45351000 -0.45351000 -0.45511000 -0.48187000 -0.97622000 0.35332000 -0.44868000 -0.44868000 -0.43767000 -0.41058000 0.91984000 -0.93909000 0.00097064 -0.49861000 0.02461500 -0.44469000 -0.51094000 0.88406000 -0.43929000 -0.23606000 -0.57437000 -0.47046000 -0.93526000 0.57898000 -0.09036100 -0.455 -0.455 -0.449 -0.449 -0.444 -0.444 -0.440 -0.464 0.000 0.235 0.235 -0.132 1.408 0.000 0.000 -0.156 -0.156 0.000 0.915 -0.470 0.717 -0.457 0.000 -0.384 -0.384 0.458 0.458 -0.439 -0.439 0.341 -0.464 -0.453 -0.453 -0.252 0.131 0.000 0.887 0.000 -0.394 0.414 0.308 -0.455 -0.455 -0.449 -0.449 -0.444 -0.444 -0.440 -0.464 0.000 0.235 0.235 -0.132 1.408 0.000 0.000 -0.156 -0.156 0.000 0.915 -0.470 0.717 -0.457 0.000 -0.384 -0.384 0.458 0.458 -0.439 -0.439 0.341 -0.464 -0.453 -0.453 -0.252 0.131 0.000 0.887 0.000 -0.394 0.414 0.308 8.2734464 -1.2344653 5.0324403 9.7379139 12.5308344 6.2319527 11.4077036 9.1652610 8.6851262 NA 11.8841064 12.4220399 5.1750415 1.3506104 3.7656514 7.8741767 4.4660920 11.3909042 11.7649474 11.0642874 9.6627412 -1.2344653 8.5794332 9.1286916 6.8636845 2.3506104 0.7656196 NA 10.0224503 6.4238639 4.9554756 9.8059416 4.8100472 10.2984316 10.2635038 4.6725441 9.3421362 2.2250898 6.6543954 12.1892932 7.9944705 7.3240725 1.0875986 7.0040564 9.0751283 NA 1.5729867 NA 5.8100472 3.2335813 2.5730109 10.8001071 NA 5.6111429 10.7191210 9.6406334 4.6725441 9.8066266 14.1416077 9.6807844 6.6048556 4.4095063 11.5812354 4.6236328 NA 0.3506104 4.0510501 14.211356 6.459138 8.160114 12.658195 9.977546 11.079669 12.242272 12.739529 10.017501 9.995672 12.128692 10.697128 8.978756 8.055671 2.573011 7.834430 11.601900 10.7677638 11.3293249 7.7740807 13.1759032 7.9430715 5.6360155 9.4969710 6.4022771 9.3585387 7.6634976 4.6725441 10.0510542 6.6904646 NA 10.1292392 8.5104857 8.8538042 10.6540147 9.8735229 10.3515535 10.7518496 7.3913605 11.1534001 5.1919179 11.1074737 9.6360166 10.5551857 10.5890193 11.2572546 9.5826356 10.6099654 10.8062842 8.8767877 4.1232027 8.9923773 6.3202410 9.7761800 4.2250821 10.1892932 7.6017025 10.3207203 8.8570874 7.5730071 12.6514436 9.9696117 9.2823369 12.1183851 10.2429043 3.0135873 -0.2342955 10.3359821 9.4781789 9.4704201 TCGA-A8-A08G 41 0 NA 607 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 1 1 NA 2 2 1 1 3 4 NA NA 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 2.427581e-07 26.6666666666667 20 3.33333333333333 16.6666666666667 33.3333333333333 9.8022814 10.1911787 12.2238389 9.4425886 8.9360719 9.0166810 10.9989940 10.0439025 9.4128035 14.0505050 11.9476701 10.5840246 1.7999162 13.2041010 4.1218609 8.0255443 4.1691714 8.8296825 9.7257367 13.0537334 1.6744155 14.6734594 2.6744155 8.8064948 11.6225060 6.4292912 1.6744155 9.2877752 9.4539743 2.7999369 7.1218629 7.8092974 -0.2000838 3.5368984 9.3545240 10.6051416 8.8306024 11.1884906 10.0643778 11.5217464 2.0223323 10.7669212 14.5422972 9.3930834 10.0787718 12.1079897 11.8353070 4.0729547 4.6744042 8.8406816 10.4326275 0.2149951 11.0349521 5.7618677 6.1278623 5.0351532 10.6407131 12.1294512 10.6856315 11.9273922 12.7783477 8.9110708 11.1951122 10.8732533 10.9729876 11.3914575 5.7463531 11.7719576 11.4421373 2.1218774 10.7202880 9.5003748 3.0754471 6.0158722 9.7800747 10.5357732 11.0557506 9.8534086 2.8588364 7.5681195 11.8542003 10.8800864 10.8904886 9.1560204 1.467100 1.655800 -0.067056 -0.073743 0.322050 0.454450 -0.155410 -0.155410 3.656900 0.130950 0.615710 0.476150 -0.059939 -0.382690 3.049700 -0.599930 0.475640 0.453940 0.434460 -0.055769 3.656900 0.136720 0.669560 1.427800 -0.197000 -0.197000 -0.466000 1.433500 0.000000 -0.608060 -0.078232 -0.067056 0.322050 0.400940 0.453940 0.453940 -0.155410 -0.155410 -0.155410 0.932040 0.419490 -1.146000 -0.601480 -0.601580 -0.038578 -0.035857 -0.059939 -0.052126 1.552200 -0.578020 -0.597010 -0.597010 0.475640 0.453940 0.453940 0.430920 -0.185720 0.290400 -0.581270 -0.571200 -1.110400 0.132280 -0.080541 -0.197000 -0.174240 -0.040480 -0.221450 -0.540680 -0.575160 0.476 0.000 -0.578 -0.578 0.454 0.454 0.431 -0.186 0.000 0.043 -0.526 0.137 0.137 0.000 0.000 -0.197 -0.197 0.000 1.467 0.000 1.434 -0.221 -0.541 0.000 0.000 0.000 0.000 0.322 0.322 0.454 0.454 -0.155 -0.155 0.932 0.932 -0.486 0.601 -0.566 0.000 0.000 0.000 0.476 0.000 -0.578 -0.578 0.454 0.454 0.431 -0.186 0.000 0.043 -0.526 0.137 0.137 0.000 0.000 -0.197 -0.197 0.000 1.467 0.000 1.434 -0.221 -0.541 0.000 0.000 0.000 0.000 0.322 0.322 0.454 0.454 -0.155 -0.155 0.932 0.932 -0.486 0.601 -0.566 0.000 0.000 0.000 7.7714789 NA 4.2810602 11.0506283 13.2674133 7.0300038 11.8471727 8.3689172 9.0296111 0.7999162 11.7971146 12.1762034 3.7385301 1.2149951 2.0223323 9.0303559 4.2810602 10.7921654 11.2954571 11.5392939 8.9996074 NA 7.9681893 10.3998479 6.0976150 8.9897598 4.7385355 0.7999162 8.8785307 6.3339139 6.0287548 8.9598064 6.8333582 9.9961356 10.9147620 1.3848787 9.2648212 0.5369481 7.0383396 11.5264372 9.5542659 7.2944572 -0.2000838 6.1037158 8.7905117 6.8111627 2.8588364 1.0223323 5.0223279 5.0180688 3.0223323 10.7163122 2.4628899 5.7618677 10.3666235 10.0868778 3.9154157 8.1501377 13.4051831 8.4256439 3.6072948 3.8588265 11.5339390 3.0223323 -1.7848806 2.9698596 3.7999369 15.341761 5.989759 8.833358 13.204101 10.551758 11.206494 13.053733 18.563874 8.598202 10.805092 13.027401 10.272288 8.840682 8.793345 2.214964 8.667214 13.292665 11.046874 12.500881 7.956439 13.454122 8.504991 5.333914 9.318260 9.397988 10.645122 6.670299 7.157487 11.947670 6.662056 1.536898 10.448892 7.470002 8.906228 9.773872 10.279715 11.032156 10.112818 10.892032 11.809647 4.956438 11.093219 8.830602 10.507869 9.564254 12.074507 10.329366 10.952431 10.700047 8.857024 1.384879 9.673841 5.933403 10.432627 4.169171 11.034952 7.318261 10.332616 10.640713 7.439046 12.723565 10.585932 9.654804 12.548338 10.387713 1.799916 1.799916 10.733626 10.609971 9.737064 TCGA-A8-A08H 66 0 NA 0 breast stage iia t2 n0 m0 female 2007 NA NA infiltrating ductal carcinoma NA NA NA 2 2 3 NA 4 3 6 4 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 2.427581e-07 16.1290322580645 48.3870967741936 0 22.5806451612903 12.9032258064516 10.1257668 10.1246160 11.1437740 9.7463346 8.4333580 9.3909088 7.7934472 10.2586611 10.3667750 10.7952566 9.9761905 10.3152447 5.9729959 11.1266294 2.9209030 10.8397713 5.6278607 8.7388323 7.0380169 9.7649215 NA 10.8863528 4.5338872 9.5549717 8.7612231 4.9419702 NA 10.6204826 9.4782027 3.8334467 7.9882632 8.1553733 1.1553607 5.0033684 9.5681549 10.3117093 9.4987812 10.0459416 9.6213477 10.7711869 3.2928701 7.2805286 15.3105552 7.7663686 9.2160692 11.3101914 10.9761905 4.4184059 0.8334164 9.6726490 11.3813037 -1.1665027 11.3451979 8.1621204 7.3609226 8.3091785 11.1095696 11.7363855 10.4174682 11.7375153 12.7079464 7.9729964 10.8506016 10.4397116 10.9812861 10.9380440 4.6408002 11.3013054 9.5476908 1.4184059 10.8277986 8.9819217 1.8388308 7.8306249 10.1732952 10.3041041 9.8207092 9.8819321 2.2928701 6.7876414 13.0144421 12.2409785 9.6115223 9.5647642 -0.0037109 -0.0277760 0.0034949 0.0020805 -0.0022168 -0.0070576 0.0243320 -0.0219210 -0.0331550 0.1895000 0.1895000 0.0020805 0.0020805 0.0054139 0.0054139 0.0054139 0.0339720 0.0339720 -0.0029091 -0.0875790 0.0108920 0.0269350 0.0269350 0.0269350 -0.0063611 -0.0012473 -0.0012473 0.0353830 -0.0265120 -0.0037109 -0.0031382 0.0081959 -0.0022168 -0.0022168 0.0041632 0.0041632 0.0243320 -0.0219210 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11.2670307 11.1879701 10.0514030 8.8585847 4.5058719 8.1666005 10.7045804 8.4352160 9.3432201 3.6914225 -1.1665027 11.4714285 6.9471869 7.1463284 8.6391891 6.4554966 10.0001105 9.7774251 4.4773017 9.1643622 0.4184598 8.2257627 12.9940258 7.7788893 9.2139062 3.7876414 4.6663362 8.1931946 -0.1665027 3.5883369 -1.1665027 5.8887286 4.1690110 4.0428982 11.1375113 2.0033864 9.8263836 10.3222895 10.2939011 5.7641816 10.3682345 12.4801164 11.4054348 2.2928701 4.1909941 10.5757547 3.2257685 2.1553607 1.6408060 2.7403448 11.649029 6.380340 8.514684 11.126629 10.318429 10.411346 9.764922 10.716470 9.138367 10.761223 12.798237 11.348159 9.672649 8.263898 NA 7.109570 10.773024 11.278977 11.738080 5.081374 13.482588 9.199768 6.703809 7.491657 9.012110 9.268396 7.858585 7.150858 9.976190 7.123464 -1.166503 11.372846 6.128067 7.630263 11.560515 11.016770 10.418877 8.162120 8.659994 11.131508 7.057447 10.413266 9.498781 10.419816 9.422160 10.843973 10.946536 11.120003 10.578279 9.216069 NA 9.910007 7.207919 11.381304 5.325300 11.345198 7.372604 10.336774 11.109570 7.380340 14.244493 10.419816 11.065866 12.532150 10.207398 4.640800 2.003386 9.962084 10.233791 9.616443 TCGA-A8-A08I 53 0 NA 365 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 3 2 1 NA NA NA 1 4 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.629541e-07 2.774378e-07 20 23.3333333333333 0 33.3333333333333 23.3333333333333 11.553311 9.937091 12.578400 10.518803 8.708952 9.269628 10.315303 10.490768 7.628412 14.392844 11.312678 11.151484 2.463309 11.681213 3.245709 8.684408 6.241512 8.724083 9.282461 12.806268 3.796733 12.686775 5.519888 9.844594 10.682473 9.929279 5.019119 13.700651 9.913855 1.626813 7.550767 7.291123 1.989357 5.441500 10.828577 10.112920 7.660226 11.098623 10.969513 11.914350 7.526807 12.028597 13.878940 9.545662 10.394514 11.705049 11.635732 5.389305 3.491879 9.332188 11.880903 -2.180495 11.062919 5.847353 8.363446 5.825073 8.570155 11.898349 10.164576 11.404763 12.749169 7.878792 11.799320 11.438282 11.309672 12.246761 6.159298 12.420406 13.077204 6.495404 10.903758 9.498048 4.092216 6.885537 10.564492 11.650755 10.109179 10.785773 2.574344 7.813801 12.978689 11.482005 11.010970 9.912535 -0.021921 0.794330 0.133620 0.158760 -0.439400 0.228700 -0.754180 -0.925400 0.043015 0.043015 0.467590 -0.315060 -0.318240 0.082476 0.127120 0.164000 0.038529 0.038529 0.399940 0.510540 -0.501730 -0.115740 -0.115740 -0.115740 -0.546230 -0.553070 3.656900 0.768880 0.683470 -0.434740 -1.292900 0.133620 -0.405280 -0.489260 0.228700 0.022257 0.713770 -0.911910 -0.973240 -0.464080 0.000000 0.020995 -0.232760 -0.204730 -0.482180 -0.522460 -1.041600 -0.332140 -0.585590 0.132140 -0.482180 -0.482180 0.038529 -0.023703 -0.089336 -1.292900 0.505100 -0.049289 -0.521340 0.384190 -1.292900 -0.115740 1.259200 -0.568730 0.079880 0.768880 -0.936810 -0.602640 -0.602640 -0.315 -0.315 0.132 0.132 0.000 0.000 -0.465 0.505 -0.512 0.395 0.395 0.000 -0.116 1.118 1.118 -0.518 -0.518 0.000 0.000 0.769 0.769 -0.289 -0.603 0.000 -0.313 0.134 0.134 -0.433 -0.433 0.206 0.000 -0.412 -0.412 0.000 0.000 0.000 0.409 -0.233 -0.482 0.195 -0.395 -0.315 -0.315 0.132 0.132 0.000 0.000 -0.465 0.505 -0.512 0.395 0.395 0.000 -0.116 1.118 1.118 -0.518 -0.518 0.000 0.000 0.769 0.769 -0.289 -0.603 0.000 -0.313 0.134 0.134 -0.433 -0.433 0.206 0.000 -0.412 -0.412 0.000 0.000 0.000 0.409 -0.233 -0.482 0.195 -0.395 7.7248351 NA 5.4267780 9.9256836 10.6780118 6.7518105 10.3673064 8.7810134 9.0634609 1.2788769 11.4469818 11.4960254 4.4488019 4.1770009 2.2117598 8.8665717 5.8194485 12.8491665 11.7706416 10.1074488 9.7424039 4.3586072 8.7479664 10.1371432 7.8895691 -0.5955328 1.4044127 -2.1804953 10.8706569 8.6483777 4.1413756 8.6219643 4.7501831 10.7860976 10.2519898 5.6959660 9.2304293 3.4341612 6.4193602 11.8536450 8.6404246 4.7967275 -2.1804953 7.5059481 8.3222797 5.1048482 -0.5955328 -0.5955328 7.6008079 5.8674987 4.2951793 10.8115011 -1.1804953 9.9112138 9.8487351 9.7278405 6.3968770 10.4778826 15.3396829 9.9158337 8.0386162 4.7383085 12.1705252 NA NA 2.7263299 NA 9.4251219 6.9253562 8.1140687 11.6812133 10.9802648 10.6551036 12.8062677 10.9885900 9.3158024 11.4793323 12.6460460 9.4341578 9.3321883 8.1681762 -0.5955328 7.4230739 11.3374863 10.5714103 11.7239884 8.2351895 13.5886842 8.5843195 8.0530673 8.2675644 9.7612291 10.1839628 8.1481227 6.9968678 11.3126779 8.3692326 -0.5955328 11.4851169 7.5991675 10.1840614 10.5625993 10.5695268 10.4592408 8.9532323 8.0117405 13.3212540 8.9135255 11.5996842 7.6602256 11.4990380 10.1695584 10.2055798 9.2314883 10.5072610 10.5703642 9.1868628 1.9893570 8.9149504 7.7862128 11.8809035 8.8320726 11.0629195 5.7263381 10.4006815 8.5701547 8.4669064 12.8223508 10.6973071 10.4401259 13.2379594 9.8798061 3.9487317 NA 10.4969473 10.5422554 9.2992282 TCGA-A8-A08J 52 1 1127 NA breast stage iv t4b n3 m1 female 2005 NA no infiltrating ductal carcinoma NA NA NA 3 2 1 NA 7 1 2 2 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 6.935946e-08 19.047619047619 28.5714285714286 9.52380952380952 19.047619047619 23.8095238095238 10.0268648 9.8146342 11.2241317 9.0296224 8.9298244 8.9288399 9.3235471 9.9872215 10.1540433 13.9689604 11.0999680 10.8170304 -1.5877062 16.8475607 3.2701402 8.8446970 4.1400751 8.7708063 7.1502469 12.8706898 0.7340484 13.8348440 0.4121854 9.8258411 11.1976075 8.2033177 2.8715874 9.6588422 10.3354825 0.7340484 8.5631715 6.7159359 NA 5.0703679 9.8499070 10.6594892 9.8478253 9.9777331 9.2917382 11.1741217 1.4121312 8.8685093 14.6778799 7.8290789 9.6379650 10.9077602 10.8170304 5.0120680 5.6975570 8.7385844 10.5190450 -1.5877062 11.0881120 5.0560112 6.2130556 5.3894360 10.9025045 11.5690281 10.3565010 10.6276880 12.5378913 7.8613034 10.9209402 10.5536235 11.0467392 10.4562076 4.7520046 11.7486616 10.6636374 NA 10.5786320 8.9258826 2.3190398 6.1670427 10.1229614 9.9566365 10.2697472 10.3269138 2.4996291 7.2855992 11.9362069 10.7113630 10.4181304 8.8331678 0.39894000 0.45939000 0.41680000 0.17422000 -0.00277070 0.04939800 0.03588800 -0.50846000 -0.48418000 -0.14695000 2.35540000 0.32414000 -0.09973600 -0.51270000 3.36020000 -0.42189000 0.32728000 0.66069000 0.40541000 -0.03925800 -0.05926900 -0.24837000 3.65690000 3.65690000 -0.48932000 -0.01023200 -0.03667400 1.31130000 -0.51393000 -0.36771000 -0.02589300 0.41680000 -0.02931100 0.00000000 -0.00041585 0.00083195 0.03863000 -0.50846000 -0.54004000 -0.09485600 0.10804000 -1.05670000 -0.38625000 -0.38625000 -0.39022000 0.08449800 -0.09973600 -0.10513000 -0.51270000 -0.56744000 -0.45045000 -0.45045000 0.66069000 0.66069000 0.85878000 0.86731000 -0.03925800 -0.03925800 -0.04897900 -0.00346270 -0.24837000 -0.44059000 -0.25431000 -0.48932000 -0.03667400 -0.13729000 -0.84010000 -0.47532000 -0.51286000 0.324 0.000 -0.473 -0.382 0.661 0.661 0.405 0.000 0.000 -0.455 -0.455 0.271 0.519 -0.195 -0.195 -0.453 0.000 -0.368 -0.210 0.682 1.174 -0.511 -0.475 -0.346 -0.461 0.222 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 0.000 0.108 -0.513 1.928 -0.386 -0.386 0.000 0.000 0.324 0.000 -0.473 -0.382 0.661 0.661 0.405 0.000 0.000 -0.455 -0.455 0.271 0.519 -0.195 -0.195 -0.453 0.000 -0.368 -0.210 0.682 1.174 -0.511 -0.475 -0.346 -0.461 0.222 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 0.000 0.108 -0.513 1.928 -0.386 -0.386 0.000 0.000 8.6636374 6.8130346 4.6019817 10.0227185 11.9095079 6.6028191 11.1821994 8.6690243 8.5514887 NA 11.4630239 12.7378603 7.0342069 3.1670367 1.9971117 7.7915334 4.1670448 11.0973418 11.8942066 10.5707647 9.4001295 2.2195248 7.8172964 10.2778883 6.6505592 5.7697083 5.3546708 -0.5879231 9.9283475 5.6789423 6.2065709 7.9139922 4.5820802 10.5961563 10.3299000 3.4565433 8.9971174 -1.5877062 6.3779393 11.8953409 8.3793814 8.8076892 NA 7.4008393 7.8108987 4.5414405 3.6600843 NA 4.2195093 5.2461838 1.7340918 11.2664390 1.5820742 7.2162861 10.5976499 10.5663402 4.8550977 8.6325332 13.9257284 8.5388594 3.1670367 4.4996163 10.2982326 6.2576443 -1.5877062 NA 0.4121854 13.6683338 6.4400602 8.4442007 16.8475607 10.2940337 10.9996981 12.8706898 10.2102217 8.4205835 10.6935055 13.0715935 8.4275701 8.7385844 8.3546695 0.7340484 9.6130537 11.8294801 11.047420 12.240291 8.601979 15.041909 8.727304 4.838417 8.969619 8.589574 10.128670 6.985802 8.402259 11.099968 6.650559 1.412131 10.782297 7.915981 7.757494 10.407922 10.092954 10.643076 8.893954 9.664229 10.027325 6.959049 10.561953 9.847825 10.157829 9.421284 10.889660 9.103899 10.849647 10.683910 8.688279 2.499629 9.258711 8.616726 10.519045 6.834219 11.088112 8.249783 10.247416 10.902505 7.000870 12.874402 10.231137 9.933755 12.031573 9.714794 NA 5.153623 10.495634 9.808225 10.004145 TCGA-A8-A08L 89 1 304 NA breast stage iiia t3 n2a m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 3 2 4 NA 3 1 2 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-06 1.491228e-06 5.18134715025907 43.5233160621762 1.55440414507772 30.0518134715026 19.6891191709845 9.3799062 9.5731522 11.7352446 9.4358288 9.2063697 9.2332364 10.6684756 11.1100543 10.1446324 14.8101117 10.5622957 11.3470747 2.8031650 13.4303248 3.3881206 8.2935590 6.6291351 7.8275485 5.9211602 12.7410728 0.9287304 12.1738515 6.3324179 9.6189316 11.2022963 7.6924607 1.3437489 8.5598237 10.7673737 4.4311950 9.8445743 6.1316348 NA 4.5916615 10.2256111 10.4512765 8.8896621 11.4268793 10.9345534 11.4796020 12.3741410 10.9347872 14.5139901 8.6525378 10.3622804 10.7639559 11.2761318 6.2202487 4.2017123 9.5304658 11.1139834 -0.6563079 10.8517748 5.4522561 6.2385500 5.0161575 8.3799060 12.0472035 9.2818417 10.7231108 12.9929325 6.0441711 11.2073380 10.8980167 11.3276167 11.4915733 4.9584437 13.0782833 12.1034126 -1.6560806 10.0192485 9.3224429 5.1429484 4.5725502 8.7908157 10.7411397 10.4723713 9.6679131 3.8672936 9.5659237 12.6231980 11.8040604 10.3922193 10.1361161 0.63810000 0.69167000 0.67845000 0.82060000 0.03693500 0.03284500 -0.02316500 1.35570000 0.03214000 0.03214000 0.86374000 0.67233000 -0.67122000 -0.68013000 0.02412700 -0.68579000 -0.68779000 0.72659000 0.64546000 0.05608500 0.45173000 -0.67499000 0.01321300 0.70082000 0.02525000 0.02525000 0.00097064 0.73057000 -0.00443120 -0.69260000 0.00000000 -0.69396000 -0.70316000 -0.71131000 0.03284500 -0.70388000 -0.01849000 0.71246000 0.62188000 -0.70729000 0.01819100 0.04613300 -0.69929000 0.04698400 0.04698400 0.04698400 -0.33399000 -0.34584000 -0.68013000 0.02412700 -0.68579000 -0.68800000 0.03778200 -0.68906000 -0.68906000 -0.69812000 -0.67848000 -0.68670000 -0.67407000 -0.67536000 -0.67499000 -0.65043000 0.01166900 -0.04807200 -0.69541000 -0.67536000 0.68012000 0.05908000 -0.00609040 -0.687 -0.687 -0.680 -0.680 0.000 0.000 -0.691 -0.687 -0.674 0.000 0.000 -0.632 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 -0.675 0.000 0.609 0.000 0.000 0.000 0.678 0.678 -0.703 -0.703 0.000 0.000 0.000 0.000 -0.351 0.000 0.000 0.000 0.000 0.000 -0.151 -0.151 -0.687 -0.687 -0.680 -0.680 0.000 0.000 -0.691 -0.687 -0.674 0.000 0.000 -0.632 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 -0.675 0.000 0.609 0.000 0.000 0.000 0.678 0.678 -0.703 -0.703 0.000 0.000 0.000 0.000 -0.351 0.000 0.000 0.000 0.000 0.000 -0.151 -0.151 8.01968968 7.12836765 4.15108759 10.53293931 12.45486814 5.97817961 11.51162098 9.12991226 8.69630547 0.92873036 11.44390202 11.64548588 4.62913510 2.25062814 2.86730345 8.43119545 7.10528417 10.16470911 11.78667595 10.79055727 9.58869084 1.51364233 8.55074679 9.83458340 7.59165997 6.39901553 3.04416677 -0.65630793 10.12468225 7.67688796 9.52177473 8.30662863 5.71877259 10.78933451 10.59076985 3.43119503 9.01261756 -0.65630793 7.62913437 12.79455708 7.25362533 7.60112004 NA 6.52860726 8.62101996 3.55318845 2.66566564 NA 6.46267404 2.80774646 3.43119503 10.89904055 8.76789874 9.35914754 10.77705711 9.34725041 5.11191603 11.04655449 12.78764727 8.72202741 6.33808563 4.29793239 10.46364626 5.43119503 NA -0.07126964 3.98758464 8.647890 8.204820 8.831573 13.430325 10.266688 11.320655 12.741073 9.938057 8.889662 10.205982 12.713466 7.879008 9.530466 9.294288 1.513642 8.192355 12.116666 11.879251 13.161216 5.553185 13.174297 8.143014 6.998368 8.935255 9.115222 11.012602 7.163911 7.253625 10.562296 9.109433 NA 9.995681 8.265573 8.629435 10.846813 11.126935 9.716598 7.433845 10.141799 9.046771 6.859433 11.130016 8.889662 9.925404 10.722027 11.517253 10.021452 10.481364 10.631156 8.761585 7.962118 8.593794 7.433474 11.113983 6.226376 10.851775 6.030232 11.644371 8.379906 7.774707 12.592105 10.729864 10.169884 12.288445 11.988941 6.226376 6.428223 10.028043 9.447676 9.918799 TCGA-A8-A08O 45 0 NA 943 breast stage iv t2 n3a m1 female 2008 NA no infiltrating ductal carcinoma NA NA NA 1 2 1 1 4 3 3 4 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.733986e-07 22.7272727272727 18.1818181818182 0 27.2727272727273 31.8181818181818 10.9410860 10.3799201 11.9810273 9.9725290 7.7051817 8.5145918 10.6914381 9.8925979 9.1480258 13.4097687 11.7221789 10.6918014 2.1959460 13.4013510 4.0940671 9.2610566 7.0984585 8.7166545 9.3082676 13.4557432 3.5438670 13.8994961 5.3512255 8.8358625 11.2094595 6.8292724 -0.2634384 9.4584683 9.4352196 3.4914042 8.3401412 8.1690566 NA 3.3803693 10.5650480 10.3530637 7.5851376 11.5207407 9.8696571 12.1085637 4.5178741 11.9108164 14.6257573 9.1556956 10.1033834 11.3767598 11.8783027 3.9064385 5.8450384 9.6107277 11.3962878 NA 11.3167734 7.7999097 4.4914042 5.0219150 10.2590964 12.1529165 10.2766429 12.6907111 12.7229791 7.7671820 11.4464602 10.9734767 11.1115543 11.5236012 5.4644363 11.9223194 11.8020992 -1.2636116 10.2536921 8.9288076 3.7419199 3.5438670 10.2678962 10.3158308 9.5843552 10.3373570 2.6433945 8.3785667 12.1036565 11.0184449 10.2482675 9.3785665 0.0212550 0.0212550 -0.3118400 -0.3104400 0.0251820 0.0232600 0.0326350 -0.7730700 0.7807100 0.0146810 0.0343270 0.0000000 0.0000000 0.0174760 0.0174760 0.0402580 0.0135640 0.0135640 -0.3616400 0.4423200 -0.3627800 -0.7690700 -0.0072629 0.3261600 -0.0374200 0.6968100 0.6968100 0.0219560 -0.3790400 0.0212550 0.0530250 -0.3118400 0.0104960 0.0251820 0.0270070 0.0270070 0.0326350 -0.7730700 -0.8048800 0.0812520 0.0773600 -0.3499000 -0.2452700 -0.2452700 -0.2452700 -0.2509700 0.0015513 1.8218000 0.0174760 0.0174760 -0.7605900 -0.7605900 0.0135640 0.0128660 0.0050684 -0.7545600 -0.7664200 0.0268670 -0.3627800 -0.7646800 -1.2929000 -0.0072629 0.0392680 -0.7851500 0.6968100 -0.7671000 -0.3669700 -0.7736700 -0.7736700 0.000 0.000 0.000 -0.761 0.000 0.000 -0.755 0.000 -0.363 0.000 -0.761 -0.726 0.000 0.000 0.000 -0.772 -0.092 0.000 0.000 -0.767 -0.767 -0.374 -0.774 -0.737 -0.737 -0.310 -0.310 0.000 0.000 0.000 0.000 -0.760 -0.760 0.000 0.000 0.000 0.000 -0.251 -0.251 -0.247 -0.247 0.000 0.000 0.000 -0.761 0.000 0.000 -0.755 0.000 -0.363 0.000 -0.761 -0.726 0.000 0.000 0.000 -0.772 -0.092 0.000 0.000 -0.767 -0.767 -0.374 -0.774 -0.737 -0.737 -0.310 -0.310 0.000 0.000 0.000 0.000 -0.760 -0.760 0.000 0.000 0.000 0.000 -0.251 -0.251 -0.247 -0.247 7.9796887 NA 5.5566930 10.4533343 11.7338708 7.1095100 10.6229735 9.4750379 8.6917142 2.7365183 11.1419222 10.8056155 2.8239735 0.3214664 3.9844435 8.2061567 2.6433945 9.2708176 11.6879817 10.7152253 9.2132610 0.7364750 8.4386875 9.4098239 5.4089394 4.8862624 1.9064289 NA 10.6903475 8.3713258 6.9410864 8.4265126 6.7809085 10.9178783 10.3654160 2.8239735 9.2193227 NA 7.6130321 11.8797386 9.2492552 6.7699383 NA 5.2756738 8.4438739 3.1288378 3.1288378 NA 3.9064385 5.9085415 1.5438918 10.3844229 -0.2634384 8.3139437 10.8342178 10.0561870 4.2600784 8.7519300 11.4265128 6.7195079 1.5438918 2.9844435 11.6819587 3.3803693 NA 1.3214664 1.7365183 14.4954667 5.9064409 8.7080582 13.4013510 9.7222500 10.3717795 13.4557432 12.8881657 9.5005571 11.3070371 12.9337315 10.8677287 9.6107277 8.6598422 0.3214664 8.1585794 12.2331190 11.094891 11.245052 7.461028 13.677835 9.512125 5.306372 9.329906 9.194922 10.782998 5.791798 7.606880 11.722179 5.543870 1.321466 11.064348 7.137394 7.470343 12.088696 9.761654 10.930964 8.767058 8.730868 13.239409 5.993903 12.815747 7.585138 9.759576 9.843078 11.929886 9.684152 11.094067 10.709136 9.509654 NA 9.201326 6.659842 11.396288 5.876065 11.316773 7.328972 10.112488 10.259096 7.457614 13.635730 10.930964 9.765802 12.644626 10.075251 1.058455 NA 11.136327 11.012930 9.835863 TCGA-A8-A08P 70 0 NA 943 breast stage iiia t2 n2a m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 3 2 1 NA 1 3 2 2 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 2.080784e-07 21.2121212121212 39.3939393939394 0 15.1515151515152 24.2424242424242 10.5172966 9.7058789 11.2485514 9.3294497 9.0714559 9.4471448 9.5605749 9.5758578 9.7737191 13.0957136 10.9195127 10.5279439 0.2705887 13.5127873 2.4929555 9.2554490 3.3294537 8.1653738 8.0052658 12.2901467 1.8555114 12.0588665 5.8950457 10.2180614 11.5043754 6.8045350 NA 10.1839441 11.2091555 2.2705588 7.9168146 7.1572691 NA 4.2705588 9.5271579 10.6978688 9.6513777 10.5447400 9.5582684 10.3442513 7.4929483 10.4392281 14.6432170 8.4129352 9.1160460 10.1306084 11.0628040 3.3294537 3.1450252 9.7114252 10.1993211 NA 10.9242968 6.3076453 7.1531994 5.6163312 10.2530743 11.8098764 10.2174623 10.9370759 12.6785318 8.4945576 10.7172947 9.9335210 10.6408802 10.5279439 4.6855926 13.0716581 9.6310373 0.2705887 10.4118117 9.1754415 1.6945682 6.1368045 8.6295734 10.2052297 10.2444925 10.1592992 3.0075185 6.2554497 12.1451532 10.8852659 9.3321523 8.9686818 0.8415900 1.2103000 1.3603000 2.1951000 -0.0261670 0.4042700 0.3828700 2.5980000 -0.2223800 -0.2217000 3.1755000 1.0536000 0.3013800 -0.1658600 2.2850000 -0.2494600 0.6500100 0.4547900 -0.1129900 1.9660000 0.1614300 0.0459910 1.2641000 0.6226000 -0.3879500 0.0700990 0.0849320 3.6569000 -0.2167600 -0.2368000 -0.0053992 -0.2364300 0.0963800 -0.2879800 -0.0261670 -0.0261670 -0.0095426 -0.0346310 -0.0560260 0.6570000 -0.1290100 -0.1805500 -0.2267500 -0.2267500 -0.2267500 -0.1983700 0.3013800 -0.1849600 -0.1658600 0.5068900 -0.2494600 -0.2494100 0.3932900 0.4547900 0.4547900 -0.1129900 -0.1468200 -0.1352300 0.1614300 -0.2949700 0.0459910 0.4479600 0.0918800 -0.0554990 0.0700990 0.4963500 -0.3612500 0.0759910 0.0969610 0.763 0.055 -0.166 -0.166 0.420 0.420 -0.113 0.000 0.161 0.032 -0.295 0.443 0.443 0.268 -0.156 0.000 0.000 -0.225 0.616 0.605 0.605 0.778 0.000 0.000 0.000 0.604 0.604 0.000 0.000 0.606 0.000 0.000 0.000 0.657 0.100 -0.222 1.945 -0.227 -0.227 0.301 0.000 0.763 0.055 -0.166 -0.166 0.420 0.420 -0.113 0.000 0.161 0.032 -0.295 0.443 0.443 0.268 -0.156 0.000 0.000 -0.225 0.616 0.605 0.605 0.778 0.000 0.000 0.000 0.604 0.604 0.000 0.000 0.606 0.000 0.000 0.000 0.657 0.100 -0.222 1.945 -0.227 -0.227 0.301 0.000 8.1973460 3.4404872 6.2630231 9.9126077 11.4642867 5.9558428 10.8473553 9.1804291 8.9216077 -0.3143738 12.7350166 12.1004003 3.8950505 1.0075543 3.6397878 8.5216440 4.1118576 11.5981086 11.5834389 10.7020536 9.2910731 4.1450252 7.6014729 9.6074344 7.4404814 5.5310851 3.1450252 NA 10.5574987 6.5184832 5.5682358 8.0714559 4.7941195 9.8547732 9.8454648 4.3580164 8.5864604 2.4929555 6.0343214 12.3239163 8.4454817 6.7079609 1.6855814 6.2855058 8.9418021 6.0864738 3.3860384 NA 7.2516471 4.1450252 3.2091570 11.1816983 0.2705887 9.0254436 10.5346075 10.5455165 4.9144114 9.8661243 14.1930475 9.2247523 6.2780498 4.5682389 11.4084010 -1.3143738 NA NA 3.0779095 13.562350 6.292923 8.259240 13.512787 9.821950 11.247120 12.290147 10.852384 8.743585 11.344474 12.842072 10.089138 9.711425 9.272433 -1.314374 7.775706 12.070107 10.637242 11.862078 6.209155 13.088005 8.486494 7.457083 9.012023 9.358372 9.502321 7.748988 5.209157 10.919513 5.751683 1.685581 10.663946 6.662873 7.381344 9.864258 10.479603 10.719016 7.877887 8.581926 10.790192 7.416912 12.467932 9.651378 10.273840 10.190909 10.910500 9.001875 10.615592 10.206703 8.625173 NA 9.009932 7.331540 10.199321 6.077912 10.924297 6.870468 10.080592 10.253074 7.255449 13.344307 10.328999 10.131643 12.478790 10.611519 2.773047 2.020449 9.826423 9.961718 9.501777 TCGA-A8-A08R 52 0 NA 30 breast stage iib t2 n1a m0 female 2008 NA NA infiltrating ductal carcinoma NA NA NA 3 3 4 NA NA NA 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 6 0 0 0 0 0 0 0 0 3.84945e-06 1.387189e-06 7.28476821192053 21.8543046357616 4.63576158940397 35.7615894039735 30.4635761589404 10.3090965 9.3215694 11.8692569 10.2226988 8.6849824 8.7303839 8.5642219 10.3889658 12.3741569 13.2669922 9.7839459 10.5412981 0.8765661 13.3287099 2.8765464 8.7954176 5.0860067 8.7703616 11.4264996 6.7713719 -1.7083964 6.7551159 9.0892534 9.3448391 11.2512318 6.7874468 -0.1234339 9.8218959 11.6930049 2.8765464 9.7115522 8.1037693 NA 5.9989514 8.8896445 8.8989224 8.6924715 9.6219487 8.9426438 12.2636743 3.0989416 6.3250158 16.5086741 8.3618070 10.5990775 10.8557415 11.5662613 6.8229736 3.6839098 10.2508696 10.2609786 -0.7083964 10.5925165 5.4814152 7.5442574 5.2457885 10.2282300 11.8179690 9.5053038 11.3780600 12.8355905 8.4615171 10.3010708 10.1795399 10.9386007 11.5749698 4.6491441 12.6709704 9.5677164 -1.7083964 10.0663790 9.7309035 4.1035732 5.7178573 9.0949159 10.0835688 12.1973551 10.6073077 3.5769937 4.8151553 12.8901680 11.1260631 9.4508327 10.0028288 0.5771900 0.0784380 0.0458210 1.3851000 0.1448800 0.5473500 0.7709900 0.4861300 0.1180000 0.3492500 2.5309000 0.4600700 -0.0761450 -0.2656400 1.0557000 0.3487600 0.1160900 0.4842300 0.0223040 -0.0392580 0.2604300 -0.3649900 1.1126000 0.2719000 2.5121000 0.3637900 0.0259530 0.4887100 -0.2042300 -0.1247300 -0.5521600 -0.0363080 0.2266900 -0.6405700 -0.4832300 -1.0136000 0.6408500 0.4861300 -0.1858400 0.4295700 1.1591000 -0.4423200 -0.5499500 -0.5499500 -0.1776500 -0.1908400 -0.0761450 -0.2601100 -0.3981900 -0.2591400 0.3487600 -0.1619200 0.1160900 -0.2298200 -0.2298200 -0.0513130 -0.0392580 -0.0129890 -0.0489120 0.4142900 -0.3649900 0.0680350 -0.3979700 -0.3514500 0.0259530 0.4956200 -0.2514900 -0.0036011 0.7201800 0.000 0.000 -0.266 0.000 -0.141 -0.141 0.000 0.000 0.000 0.000 0.000 -0.365 0.000 0.000 -0.398 0.000 0.000 0.577 0.577 0.489 0.489 0.000 0.720 0.279 0.000 0.000 0.000 -0.317 -0.317 0.543 0.314 0.122 0.122 0.000 0.193 1.687 1.687 -0.178 -0.178 0.000 0.000 0.000 0.000 -0.266 0.000 -0.141 -0.141 0.000 0.000 0.000 0.000 0.000 -0.365 0.000 0.000 -0.398 0.000 0.000 0.577 0.577 0.489 0.489 0.000 0.720 0.279 0.000 0.000 0.000 -0.317 -0.317 0.543 0.314 0.122 0.122 0.000 0.193 1.687 1.687 -0.178 -0.178 0.000 0.000 8.0564638 -1.7083964 6.2399593 9.4998264 11.4533538 6.5792118 10.1460708 11.0678112 7.6515390 -1.7083964 12.1011592 12.0234414 3.6491441 NA 4.0195151 9.3174237 4.2223332 11.5232632 12.1285300 10.4946341 8.7334987 NA 8.3643947 10.4030538 7.6112639 0.6135317 NA NA 10.5504524 2.3790664 5.7009834 9.1742351 4.9640197 10.8922878 10.4422913 5.5489791 9.0023985 3.6135199 8.0811255 12.3941419 7.8210226 6.7345349 NA 0.2916036 7.6513416 6.7874468 1.6135317 -0.1234339 6.3684069 4.6603582 4.0989501 11.7072018 4.7178573 10.9558170 10.5545677 9.9295753 5.1370813 9.4033798 13.8152152 8.3657336 6.8112282 4.1495764 9.5288020 2.1984942 8.5022634 1.4615286 8.0092682 13.550649 6.257377 7.799387 13.328710 9.733499 11.303693 6.771372 11.900309 9.084130 10.873960 12.932345 12.290535 10.250870 7.696733 4.198486 8.309792 11.660098 10.545439 11.821023 4.481415 14.476951 8.223807 6.988560 8.480181 10.096933 9.454235 7.400116 5.510759 9.783946 6.850013 1.876566 11.022911 8.482651 9.076791 12.809753 11.641564 10.643635 8.315347 7.935448 8.955150 9.280277 10.358341 8.692471 10.062669 9.760725 12.418861 11.572363 11.472278 10.289124 9.694071 NA 9.552506 7.481417 10.260979 9.226757 10.592516 7.423449 10.157828 10.228230 8.014399 13.393978 10.263854 10.729084 12.947793 10.297217 4.441337 3.906304 10.450202 10.104170 9.224545 TCGA-A8-A08S 71 0 NA 1004 breast stage iia t1c n1 m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 1 1 1 NA NA NA 2 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 3.81477e-07 35.1351351351351 13.5135135135135 0 27.027027027027 24.3243243243243 10.6049418 10.2222106 11.6948634 9.7739368 8.7887448 8.9759866 8.9998182 8.4749491 9.2473149 13.5465911 12.1023356 10.6174378 3.2746195 15.3979894 4.0401560 8.5389086 6.4121261 8.7621943 12.3946874 14.1809368 4.8434664 14.3899912 5.3901002 9.3705468 11.3982265 7.9601891 -0.6321817 10.9695026 13.0971932 5.9676436 8.0366165 6.0819765 NA 3.5376564 9.8834316 10.6746479 6.2319181 10.7343272 10.1045564 11.6192142 2.4552023 9.6292391 14.4677575 8.3924561 9.4277522 11.1859145 12.0324013 4.5965476 3.1226230 9.1831150 12.2793110 0.3677065 11.3065762 3.9824460 5.4551957 4.5376564 10.1138261 11.6268865 10.2925442 10.6516883 12.6077032 8.4432109 11.0221440 10.9636302 11.3367585 11.0599114 5.3450131 11.5425014 9.9494032 -0.6321817 10.6534230 9.6755018 3.2827808 5.0115896 10.6989287 9.5899230 10.1706519 10.9683416 2.1750774 9.8065237 12.5093600 10.9986814 10.0603472 9.3065762 0.1557700 0.1557700 0.0233620 -0.0055375 0.1754000 0.1481600 0.3938000 0.3601300 -0.7176400 1.4795000 1.4795000 0.0000000 0.0000000 0.1575000 3.6569000 -0.7186200 0.4429100 0.4193200 -0.3382500 0.9479300 -0.0725410 0.6485600 3.6569000 0.1866200 -0.1942500 -0.2154200 -0.2154200 0.4380100 -0.6877000 -0.7211000 -0.2501900 0.0252500 0.3071300 0.2123800 0.0431020 0.0451410 0.3938000 0.3601300 0.3601300 -0.5427000 -0.5445800 -0.7372000 -0.1042100 -0.1042100 -0.1042100 -0.0679910 0.0000000 0.0000000 0.1901000 -0.2927200 -0.7186200 -0.7186200 0.4429100 0.4975300 0.4975300 -0.3382500 0.9963400 0.9963400 -0.0725410 -0.6969400 -1.2929000 0.1866200 -0.0319030 -0.1942500 -0.2154200 0.3976100 -0.2509200 -0.2088300 -0.2088300 0.000 0.000 -0.135 -0.719 0.443 0.443 -0.338 0.996 0.000 0.145 -0.697 -0.469 0.187 0.000 0.000 -0.215 -0.215 -0.688 -0.037 0.438 0.438 -0.251 -0.209 -0.250 -0.250 0.000 0.000 0.175 0.175 0.000 0.000 0.360 0.360 -0.543 -0.543 -0.718 0.762 0.000 0.000 0.000 0.000 0.000 0.000 -0.135 -0.719 0.443 0.443 -0.338 0.996 0.000 0.145 -0.697 -0.469 0.187 0.000 0.000 -0.215 -0.215 -0.688 -0.037 0.438 0.438 -0.251 -0.209 -0.250 -0.250 0.000 0.000 0.175 0.175 0.000 0.000 0.360 0.360 -0.543 -0.543 -0.718 0.762 0.000 0.000 0.000 0.000 8.95644644 3.79399989 6.69416145 10.18511515 11.70409886 6.70816102 11.15808029 10.83500868 9.07689307 -1.63218166 10.21752785 11.30909488 1.36770654 4.39009671 3.68965699 7.43919425 4.04015599 10.47951948 11.33783768 10.30473770 9.57230289 1.53764396 7.70535384 10.10919873 5.20062205 9.28882894 0.68965699 NA 11.03838803 7.50472287 8.37475912 7.62982651 5.31024559 10.65411631 10.45519466 1.17510938 8.23191811 -0.63218166 6.48147333 11.60224989 7.56248896 7.16863201 NA 3.36773449 8.20693571 1.53764396 3.72528309 -0.04736823 3.12262303 6.68753945 1.36770654 10.66378765 NA 4.43382076 10.20929617 10.00707255 2.53766881 9.09053934 14.08615763 7.33351587 1.95270631 2.06815486 14.78728055 3.57718710 0.36770654 0.95270631 0.95270631 15.5687644 6.0115873 8.3131755 15.3979894 9.9657843 10.4250467 14.1809368 11.9505794 8.3873225 11.4085352 13.1184911 9.0286192 9.1831150 8.1226194 0.3677065 7.5376572 11.0992630 11.192691 12.335228 7.171862 14.033316 8.214789 4.557557 9.465106 9.044570 10.236331 5.883433 3.689657 12.102336 5.967644 -1.632182 11.578403 4.859587 7.656298 10.146220 9.752515 11.251711 9.732862 9.320473 12.523103 4.321928 11.781966 6.231918 11.601801 9.736784 12.110041 9.528864 10.419281 10.637735 8.571080 10.312810 8.522170 7.702385 12.279311 3.615663 11.306576 6.657750 10.148682 10.113826 6.982441 12.688603 9.520017 9.800274 13.056201 9.436510 1.175109 4.447321 10.977603 11.334958 9.680048 TCGA-A8-A08T 64 1 3409 NA breast stage iv t2 n1a m1 female 2002 NA no infiltrating ductal carcinoma NA NA NA 1 1 5 NA 2 2 4 2 5 6 NA NA 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 3.121176e-07 21.6216216216216 18.9189189189189 2.7027027027027 32.4324324324324 24.3243243243243 11.138853177 10.024121009 11.844002014 9.821495459 8.224812540 8.143954056 10.442957280 8.448808468 9.878711396 13.422944560 11.412458862 10.397409491 1.582556003 13.002344674 4.140557818 9.576284604 5.716414798 9.065479954 10.283384967 13.100830676 3.872070284 13.809574206 8.137148954 9.220987928 10.928334862 6.473330722 NA 9.781687070 10.137148826 4.435001779 8.264383953 6.908489898 NA 3.967223953 9.819371529 10.417908619 10.019040231 10.788217503 10.181232901 11.693695680 5.912479816 10.696880788 15.178956858 7.249032840 10.385255867 11.706968551 11.539178154 4.872065357 5.041992001 9.239977709 9.867962236 -0.002454669 11.018808848 6.951794086 5.193996408 4.872065357 10.262040097 11.882658294 10.566187072 10.846220466 12.736534186 7.796339476 11.532062534 11.593516991 11.333546055 11.147767899 5.207049472 12.307358051 11.928334862 -0.002454669 10.051975772 9.055589111 3.419835490 4.770189468 11.479228793 10.232015764 10.326646325 12.101103883 2.500088176 6.655808324 12.199210940 12.051410272 10.032854897 9.523770700 1.4948000 1.5734000 -0.0167040 -0.0391220 0.7218800 -0.0283550 -0.0124380 -0.0441440 3.6569000 0.0881130 3.5151000 0.0119580 0.0322810 -0.0042929 0.0019418 0.0019418 -0.0175290 -0.0173910 -0.0521260 -0.0335410 0.0471260 0.0461330 0.0461330 0.0461330 0.0603650 0.0603650 0.0490490 0.0555150 0.0270910 -0.0347680 -0.0254830 -0.0391220 0.8036400 0.7047600 -0.8598700 -0.0676250 0.0181920 -0.0441440 -0.0441440 0.0791590 -0.0125760 -0.8380600 -0.0274240 -0.0274240 0.0150280 0.0150280 0.0322810 0.0827650 -0.0042929 0.0019418 0.0019418 0.0019418 -0.0175290 -0.0173910 -0.0173910 -0.0521260 0.0120970 0.0120970 0.0296060 -0.7194200 0.0461330 0.0461330 0.6860800 0.0603650 0.0603650 0.0555150 -0.0042929 0.0869560 0.0869560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.219 -0.724 0.000 0.000 0.629 0.629 0.000 0.000 0.000 1.468 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.722 0.000 0.000 0.000 0.000 0.000 0.000 2.853 3.657 0.000 0.000 0.132 0.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.219 -0.724 0.000 0.000 0.629 0.629 0.000 0.000 0.000 1.468 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.722 0.000 0.000 0.000 0.000 0.000 0.000 2.853 3.657 0.000 0.000 0.132 0.132 8.195633038 4.056488155 5.660563586 10.540951564 11.133306770 7.594557507 11.497443415 9.016335574 7.784062888 NA 12.487612661 10.978703310 2.997599524 -1.587272661 3.582556003 9.079746632 3.113067014 9.204611735 11.072185004 11.248882627 9.453609556 4.888368221 7.718696572 10.189890269 6.012548561 3.936195052 1.220020330 NA 10.754709659 8.301378214 6.863845554 8.433615067 5.888368221 10.180786255 11.009057738 3.500100927 8.286079017 -1.587272661 6.783323065 13.012605946 9.027344839 7.038343991 -0.002454669 3.936195052 8.814581184 -1.587272661 3.500100927 0.734568730 4.193992467 5.345261525 1.220020330 10.482420363 NA 5.331497424 10.497443415 9.860234844 3.412632507 8.324027041 10.983676555 8.119994167 3.366825758 3.270618641 12.763919367 2.219989364 -1.587272661 2.500088176 3.167518504 13.633303 4.716415 9.182473 13.002345 10.222403 11.187216 13.100831 12.758733 9.098260 10.990064 13.089804 11.940601 9.239978 9.431531 -1.587273 6.993835 11.734563 11.109820 12.077971 6.140556 13.401672 9.230418 5.232814 9.758595 8.145650 10.844892 6.207051 7.569982 11.412459 6.765781 2.997600 12.483762 7.651039 5.745253 12.798767 10.844133 10.716701 8.563791 8.394202 12.237295 5.967224 11.115704 10.019040 10.131168 9.826263 12.126666 9.879221 10.498107 10.356615 9.189068 -1.587273 8.864650 6.940112 9.867962 5.990063 11.018809 6.536757 10.486107 10.262040 7.904568 14.588068 10.093873 10.403448 12.622088 10.439158 0.412619 3.757823 10.840472 10.740468 10.477041 TCGA-A8-A08X 42 0 NA 1308 breast stage iiic t4d n3a m0 female 2007 NA yes infiltrating ductal carcinoma NA NA NA 3 2 4 NA 5 1 5 6 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.467973e-07 1.387189e-07 42.8571428571429 14.2857142857143 7.14285714285714 21.4285714285714 14.2857142857143 10.2090924 9.4980001 11.5772633 9.5986537 8.5311670 9.1862212 9.8285299 9.5543991 12.1401297 12.7800802 9.9438604 10.5868719 4.2643788 17.2886002 3.2643863 10.3787734 6.7562334 8.8809291 8.0813641 11.3104812 NA 9.4380574 8.3115045 10.2980511 11.3441984 5.0972695 1.5863084 9.6307025 11.8962395 1.2643563 8.7977102 6.9154325 0.2643563 8.5497827 9.6609851 10.1477874 9.3663561 9.6459234 9.9871878 11.1496954 2.5863084 8.0058474 15.7694631 8.0864733 8.9368058 11.2654366 10.3742109 5.6394203 2.0717284 9.4280299 11.3797492 NA 10.8001417 6.3411959 7.2587337 5.4141288 10.5364268 11.6548181 9.8642933 11.8192090 12.4064874 7.3465297 11.0817638 10.3026409 10.8721730 11.4780921 4.7238097 11.3043275 9.0342182 0.2643563 10.4274010 9.8698598 4.1268325 6.1098703 11.8587050 9.8035391 10.3564767 9.7227870 5.1470217 10.4374328 13.2810146 11.2964261 10.2452339 9.8827659 0.642930 0.675110 0.183480 0.346810 0.078294 0.271900 0.479760 0.048830 -0.469400 -0.469400 0.886460 0.467930 -0.101710 -0.127200 -0.127200 -0.127200 -0.248130 -0.113610 -0.471520 0.116090 -0.256730 0.297400 3.656900 0.031014 0.153970 0.153970 0.153970 0.275840 -0.140560 -0.142980 -0.140940 0.096608 -0.466960 -0.286910 -0.319370 -0.319370 -0.195000 0.048830 0.048830 0.131550 -0.180810 -0.469400 0.640300 0.640300 -0.258170 0.140730 -0.101710 -0.101710 -0.309560 -0.127200 -0.127200 -0.127200 -0.248130 -0.113610 -0.152890 0.296120 0.071535 0.071535 -0.256730 -0.398880 -0.169550 -0.278940 0.138060 0.153970 0.153970 0.065226 0.216370 0.038489 0.038489 0.344 -0.102 -0.127 -0.127 -0.248 -0.114 -0.472 0.000 -0.257 -0.141 -0.265 -0.279 -0.279 0.138 0.138 0.154 0.154 0.539 0.673 0.000 0.211 0.216 0.000 0.000 0.000 0.000 0.000 -0.467 -0.287 -0.047 -0.319 0.000 0.000 0.132 0.132 -0.152 0.318 0.569 -0.258 0.000 0.000 0.344 -0.102 -0.127 -0.127 -0.248 -0.114 -0.472 0.000 -0.257 -0.141 -0.265 -0.279 -0.279 0.138 0.138 0.154 0.154 0.539 0.673 0.000 0.211 0.216 0.000 0.000 0.000 0.000 0.000 -0.467 -0.287 -0.047 -0.319 0.000 0.000 0.132 0.132 -0.152 0.318 0.569 -0.258 0.000 0.000 7.1591983 5.0717369 5.5123091 10.5370101 11.8507510 4.5626698 11.8948750 10.7003162 8.3549691 -0.7355236 13.1549296 12.1000202 4.1223580 NA 3.8493388 8.7741555 4.9082365 11.4314848 11.4823380 10.9880413 9.8735592 NA 8.2473741 10.0829625 8.8035393 -0.7355236 0.2643563 NA 10.4529692 3.6567023 7.4786993 8.5997708 8.6758914 10.0198438 11.0146686 3.8493388 9.6437586 NA 7.7800804 13.0232281 7.3936633 7.1470237 0.2643563 0.2643563 7.8342359 2.2643863 4.3087759 NA 5.6042315 5.3630449 3.7879443 11.4910936 NA 8.8790903 10.2032248 10.0424575 5.8642926 10.8299585 12.4134923 8.9421001 5.8937359 5.0457400 10.1697673 2.2643863 0.2643563 NA 4.8189681 11.499380 7.731986 8.990598 17.288600 9.808987 11.157303 11.310481 9.686445 8.807412 10.216394 13.128470 11.641591 9.428030 7.982057 1.849359 7.454205 12.127018 11.4029721 12.4456879 5.4931990 13.9168327 8.8790903 8.7093951 9.1051582 8.7502095 10.2374032 7.1772700 6.7401140 9.9438604 6.2301646 NA 10.4542049 7.2811882 6.8657061 12.6054822 10.9986666 11.0600142 8.7899010 7.7957618 9.3885017 11.2061616 10.4217399 9.3663561 10.4738337 9.9751868 11.1798863 12.6886779 9.5170457 11.0180150 9.1470235 8.0358697 9.3367944 7.4189455 11.3797492 10.7083599 10.8001417 8.6285152 12.0473785 10.5364268 7.6131087 14.1186644 10.2459477 9.7986832 11.9954872 11.5405047 3.7238097 0.2643563 9.8512201 10.2943577 11.1389775 TCGA-A8-A08Z 76 0 NA 1217 breast NA t4b n3a m0 female 2004 NA NA infiltrating ductal carcinoma NA NA NA 1 2 3 NA 3 3 4 1 6 5 NA NA 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.774378e-07 25.9259259259259 22.2222222222222 7.40740740740741 25.9259259259259 18.5185185185185 11.01234554 10.36007342 11.82584202 10.03832451 8.30791116 9.06494319 10.31605996 9.94920953 9.97610611 11.89126318 10.07370805 10.39441232 6.21747308 12.61955077 3.99929651 10.30344697 4.61340199 8.74433335 8.97048529 12.37451033 3.02844539 13.30944259 5.47204580 9.43074587 10.74817096 5.01394010 NA 10.20356519 10.37504226 2.55451518 8.09366739 8.08328837 -0.03047188 4.98449821 10.03204214 9.95158911 9.78919306 10.98379916 10.10867120 11.91132745 5.96201219 10.64079235 15.37275800 9.11112550 9.71885135 11.82428476 11.55872917 5.08502517 0.70655265 9.60375225 10.85422549 NA 11.42127249 7.78972534 7.07807073 6.92374226 10.64755943 12.01302925 10.73635111 12.01291532 13.11415135 7.96766664 11.25031695 11.01173225 11.50206447 11.38511196 5.49310930 12.24246752 11.06164263 2.47204580 10.43749128 9.17248627 3.81185118 6.99560888 10.70510221 10.54413972 10.17003620 9.85524256 4.40695157 6.68379188 13.28945348 11.92240876 9.91499004 9.63251125 1.10350000 1.11230000 0.00708260 -0.00636680 0.00485790 -0.01170300 -0.00241320 -0.00241320 0.85146000 0.85146000 0.01377200 0.01460900 0.01460900 0.01433000 0.01433000 0.01433000 -0.60352000 0.01656800 -0.01491600 -0.00609040 0.01288900 0.00624810 0.00624810 0.00624810 0.00332990 0.00332990 0.00332990 0.02188400 0.03439500 -0.00152430 -0.00912860 0.00708260 0.00485790 -0.00843850 -0.01170300 -0.01170300 0.02553100 -0.00241320 -0.00241320 -0.00857660 0.00291330 -0.61652000 -0.00221680 -1.17640000 0.01488800 0.01488800 0.01460900 0.01460900 0.01433000 0.01433000 0.01433000 0.01433000 -0.60352000 0.01656800 0.03679400 -0.01491600 -0.00152430 -0.00152430 0.00589340 -0.59400000 0.00624810 0.00624810 -0.00069303 -0.00933650 0.00332990 0.02188400 0.00527490 -0.59273000 -0.59273000 0.000 0.000 0.000 0.000 -0.604 0.000 0.000 0.000 0.000 0.615 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.104 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.604 0.000 0.000 0.000 0.000 0.615 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.104 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.75090592 NA 5.39581001 10.47568845 10.79556493 6.92323834 11.32361191 9.26861685 8.13780064 -0.03047188 12.34313643 11.53581434 2.55451518 -0.03047188 2.47204580 9.04725209 4.08502517 10.40521647 11.15194054 11.39406247 9.05965866 7.20795140 8.07108421 9.84503961 6.54445447 2.77690409 2.08501667 -0.03047188 11.24799567 7.19836449 8.69406009 8.67920455 7.03921957 9.81011964 10.91645246 4.84401398 8.56697798 NA 8.16266071 12.12952262 8.82752722 7.41800690 -1.61528704 1.96952812 8.07632714 2.70650845 4.29147095 NA 5.17900140 5.48124727 1.38460246 10.48885479 NA 7.38458346 10.27978026 9.99975357 5.50352365 9.87141877 11.99975353 9.88293431 4.05700830 3.24257202 10.48162821 2.77690409 NA 1.19194159 -0.03047188 11.9940984 5.0850252 8.1659436 12.6195508 10.0565670 11.0100642 12.3745103 11.9861224 9.2087470 10.5557605 13.4969418 10.7104513 9.6037523 8.2503169 0.7065527 7.4425753 11.4425754 11.3923118 12.1225704 7.2047628 13.2891685 9.0157607 6.0139401 9.0329414 8.7121363 10.7140549 7.3845835 4.5545090 10.0737081 6.3902085 3.5940349 12.3627579 5.6325125 6.9931716 13.6261200 10.5903770 10.4378308 8.9714234 8.6182034 11.8172561 4.6325125 11.3848972 9.7891931 10.2782644 9.8894027 11.4528581 10.0953902 10.9660197 10.5356002 9.8898991 NA 9.5020905 8.4931473 10.8542255 4.1659441 11.4212725 9.0148510 10.4059975 10.6475594 7.9159654 14.0174937 10.0758910 10.3989529 12.9370127 10.7750214 NA 0.7065527 10.5183681 10.7196949 10.0845898 TCGA-A8-A090 74 0 NA 0 breast stage iia t2 n0 m0 female 2008 NA NA infiltrating ductal carcinoma NA NA NA 1 1 1 NA NA NA 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 3.121176e-07 32.258064516129 25.8064516129032 0 16.1290322580645 25.8064516129032 10.4253517 10.5048920 11.7077119 9.7726540 8.8728106 9.0595048 9.8808995 9.6229263 9.6146349 12.5361416 10.4122561 10.2446214 -1.4092782 13.5270125 4.4735207 9.4673977 5.7608064 8.1777205 8.4962678 12.9848743 0.9128031 13.6118606 1.7608171 9.0777157 11.3134748 7.3390732 -0.4090866 9.6542757 10.5544993 5.0503101 7.6187863 7.5245715 -1.4092782 3.6783424 9.6049012 10.9321215 10.2161329 9.8803232 9.3607185 11.4672057 -0.4090866 11.0544050 14.4820710 8.8567536 9.6836379 11.3561668 11.6630133 3.6352784 3.5450788 9.8268948 11.1866044 -1.4092782 11.2019054 4.4488613 7.1569345 5.8482674 10.0307115 11.3687524 10.5717343 12.3936999 13.0242053 8.0129452 10.7220945 10.5397042 11.5401603 11.1384982 4.8576675 12.1105169 10.4589315 NA 10.5000237 9.3795991 3.2376249 6.4363701 9.4917475 9.9954900 10.3808217 10.5308271 0.5909134 5.8100497 11.8377697 10.5289900 9.7707897 8.5936955 1.8836000 0.0276380 0.0000000 0.0000000 0.0066653 0.0249690 0.0256710 -0.7216300 0.5187400 0.5187400 0.4947600 0.0100060 0.0041632 0.0125160 0.0125160 0.0125160 0.0086135 0.0086135 -0.7214400 -0.6927800 -0.1557900 0.3531600 0.3531600 0.3531600 -0.0238400 -0.0238400 -0.0272610 0.3427500 -0.3336500 -0.3270400 0.0027745 0.0000000 0.0066653 0.0066653 0.0249690 0.0249690 0.0256710 -0.7144400 -0.7216300 -0.0069619 0.0000000 0.5187400 -0.6997900 -0.6911500 -0.6911500 -0.6911500 0.0041632 0.0041632 0.0125160 0.0125160 0.0125160 0.0125160 0.0086135 0.0085612 0.0143300 -0.7046900 -0.6927800 -0.7057600 -0.1557900 -0.6803100 -0.6583600 0.3531600 -0.3234400 -0.0238400 -0.0272610 -0.3377900 0.0120970 -0.3249500 -0.3536200 -0.674 0.000 0.000 0.000 0.000 0.000 -0.705 -0.693 -0.156 0.000 -0.680 -0.705 0.353 -0.686 -0.686 0.000 0.000 -0.327 0.000 -0.338 -0.338 0.000 -0.354 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.519 0.519 -0.691 -0.691 -0.172 -0.172 -0.674 0.000 0.000 0.000 0.000 0.000 -0.705 -0.693 -0.156 0.000 -0.680 -0.705 0.353 -0.686 -0.686 0.000 0.000 -0.327 0.000 -0.338 -0.338 0.000 -0.354 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.519 0.519 -0.691 -0.691 -0.172 -0.172 8.5951012 NA 4.8576675 10.4647092 11.2608729 6.7561400 11.6059472 8.3635745 8.7836295 0.1758120 11.5390653 11.5048321 3.1144503 -0.4090866 3.9484326 7.8670050 4.2347389 10.3119799 11.4330345 11.7057617 8.5695910 3.0503101 7.5880602 9.6636832 6.4046613 7.0045081 1.9128031 NA 11.3228360 5.2347351 6.0087334 8.4316585 6.9745844 9.9242485 10.8497411 5.1300413 8.8494467 NA 7.5624241 11.6884191 8.7253069 7.0666145 NA 7.9307308 8.3574095 NA 2.7607958 NA 4.8946626 5.3895806 2.9832034 10.2060505 -0.4090866 8.5067602 10.3693685 10.0961960 3.3982409 9.5880602 13.4007995 9.4182233 3.9484326 2.1758439 11.5790327 2.4977656 NA 2.7607958 0.9128031 14.3674437 6.9440280 8.9082932 13.5270125 9.3763331 10.4716121 12.9848743 13.3896056 9.1290697 10.9716122 13.8805394 10.7114426 9.8268948 8.0847361 -0.4090866 7.3188013 12.0700293 10.433624 11.086236 8.177721 12.864308 8.794229 5.277382 9.042092 10.224330 8.918590 7.401452 6.843545 10.412256 6.160737 -1.409278 10.677017 6.515694 7.885341 10.854737 9.631170 10.403459 8.828091 8.800334 13.068576 5.175844 11.757971 10.216133 9.698752 10.206510 9.367314 9.679006 10.658315 10.087734 9.487970 0.175812 9.175956 6.227506 11.186604 4.568160 11.201905 6.730432 9.637323 10.030712 7.328973 12.754294 10.110517 10.567803 13.588325 9.805807 NA NA 10.512350 10.259323 9.095700 TCGA-A8-A091 61 0 NA 1004 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 1 1 1 NA 2 2 1 1 3 4 NA NA 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 2.427581e-07 43.75 37.5 0 12.5 6.25 11.408586 10.325290 12.185500 10.402728 7.815154 7.565854 11.025455 9.168723 10.212838 13.412445 12.461767 10.463269 1.139600 12.968959 3.946946 7.987864 5.697585 8.594459 4.958351 13.701725 0.554638 14.851519 2.613532 9.024689 11.911995 8.489300 -0.445362 9.057790 8.428070 1.876566 10.022232 7.344703 7.062421 5.649144 10.216701 10.006868 10.319774 11.200585 10.371877 12.717437 3.291589 10.957816 15.131455 8.302048 10.813192 12.203808 11.940489 3.946946 6.724552 9.489300 10.693112 -0.445362 10.756138 10.680901 5.003085 5.024945 10.412607 11.819460 10.139589 11.090226 12.887083 8.007211 11.121632 11.290448 11.409365 11.796709 6.046480 12.054389 13.414646 -2.030325 10.127958 9.658351 3.294474 5.649144 10.138336 10.395667 10.628322 10.906486 2.361993 6.558378 10.993765 10.728720 10.601296 9.734536 -0.00816240 -0.00553750 0.22762000 0.21837000 0.49165000 -0.05368400 -0.01560400 -0.01560400 3.65690000 3.65690000 1.47110000 -0.00968060 -0.00968060 0.49580000 3.65690000 -0.55897000 -0.00761010 -0.00705760 0.48079000 0.50361000 0.00000000 0.01056400 0.01056400 0.00138290 0.00208050 0.00208050 0.01614600 3.65690000 0.00041593 -0.00816240 -0.00830050 0.22762000 0.49165000 0.49165000 -0.02275700 -0.02275700 -0.01560400 -0.01560400 -0.01560400 -0.56366000 0.49909000 -0.56892000 -0.01147300 -0.01147300 -0.01147300 -0.01147300 -0.00968060 -0.00968060 0.49580000 -0.55136000 -0.55897000 -0.55897000 -0.00761010 -0.00705760 -0.00705760 0.48079000 0.50361000 0.52713000 0.00000000 -0.58318000 0.01056400 0.01056400 0.48096000 0.00208050 0.01614600 -0.01711600 0.49510000 0.52742000 0.51089000 0.000 0.000 0.348 -0.544 0.000 0.000 0.481 0.504 0.000 0.963 -0.546 0.000 0.000 0.496 0.496 0.000 0.000 0.000 0.000 0.000 0.000 0.495 0.527 0.000 0.000 0.228 0.228 0.492 0.492 0.000 0.000 0.000 0.000 -0.209 0.290 -0.569 3.657 0.000 0.000 0.172 0.172 0.000 0.000 0.348 -0.544 0.000 0.000 0.481 0.504 0.000 0.963 -0.546 0.000 0.000 0.496 0.496 0.000 0.000 0.000 0.000 0.000 0.000 0.495 0.527 0.000 0.000 0.228 0.228 0.492 0.492 0.000 0.000 0.000 0.000 -0.209 0.290 -0.569 3.657 0.000 0.000 0.172 0.172 8.43828786 NA 5.24578846 10.56841438 10.80906453 7.59987640 10.68455333 8.96828951 8.68053921 3.46151546 11.37932004 10.85246553 3.92386227 2.29160356 2.77700934 8.53095171 4.19848630 9.16994955 11.51269573 10.10152087 9.54425740 -0.03032454 7.76245446 9.29946035 6.84924745 5.00308497 NA NA 10.35093653 5.45347807 7.76894584 7.92531409 7.81985081 11.31614438 10.44792793 5.49322461 8.25506635 NA 6.61351987 12.72272393 9.96083139 8.12068060 -0.44536204 1.67011518 7.55462645 -2.03032454 4.46151546 -0.44536204 5.43727102 4.78293270 3.05712097 10.55133528 NA 7.54520312 10.25217318 9.34578932 4.39592651 9.08405709 11.36506417 8.59719780 1.42910708 3.21758747 11.74815179 3.36197885 0.29160356 2.36199289 3.09894164 16.258641 4.255063 8.923133 12.968959 10.181248 9.576069 13.701725 13.064855 8.545581 11.212689 12.353098 9.323913 9.489300 7.700983 2.724541 7.171787 12.663478 10.9294848 12.8034929 8.6008410 14.3629516 8.6126183 5.6975848 10.1800308 8.7665147 11.0086498 6.8088677 8.8545976 12.4617675 6.3662680 0.2916036 11.4567503 9.2417105 6.5826057 11.9999862 10.3737411 10.5399940 9.1213146 8.4833914 12.1116912 6.2915925 11.3934548 10.3197744 10.2140278 9.4182964 12.1427945 9.9798423 9.9906439 10.3103485 9.1168690 -1.0303245 8.6182464 6.8759827 10.6931116 5.9808913 10.7561378 7.4146785 11.4824044 10.4126074 7.7428362 13.5477712 9.8450293 9.5418904 12.1044913 10.0027427 -0.4453620 9.0788417 10.6367755 11.1402149 10.3584885 TCGA-A8-A092 48 0 NA 942 breast stage iiia t2 n2a m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 3 2 4 NA NA NA 2 2 5 6 NA NA 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.907385e-06 4.855162e-07 19.4444444444444 47.2222222222222 0 18.0555555555556 15.2777777777778 9.9587947 10.0449018 11.7076976 9.1031845 9.5182222 8.3186129 9.6519312 9.2393541 9.8382965 13.6894651 9.4144208 10.6702830 1.4050666 13.5445035 3.8789901 8.9022452 4.4639494 8.3746852 10.1603172 13.2715649 2.5570669 13.2597540 6.9040192 9.3211770 12.0675293 3.9630579 1.2351143 9.2372456 12.6937967 0.2351143 8.3950049 6.3172824 -0.1798415 3.4445876 9.7742926 10.9002475 9.4372575 10.8392236 9.7983300 11.4601905 5.1054979 10.1074239 14.6413886 8.2351900 9.1322229 11.1781979 11.9796522 2.6945682 1.5570424 9.3727654 10.7481210 NA 11.1284352 4.4445876 6.0993205 5.1539958 10.1618004 11.9463705 9.8364402 12.0988360 12.2811493 7.8933452 10.5306157 10.1654792 10.8606142 10.9935652 5.4543009 12.6154595 12.0690121 NA 10.1215924 10.6344117 3.2319699 5.2685579 11.1320337 9.8906645 10.5228461 11.5122758 1.4050666 8.9749144 12.5906913 12.3283862 10.4400105 8.6434634 1.4776000 1.4776000 0.0000000 0.4532900 -0.1522100 0.0189430 0.4331100 -0.0128340 -0.9880800 3.0073000 3.5301000 0.4723800 0.4723800 0.0111210 0.0111210 0.0111210 0.4007700 0.3787400 -0.4626900 0.3875000 -0.4578400 -0.4915200 0.9467000 0.9467000 0.0575110 0.8153200 0.4780400 0.8627500 -0.4528600 -0.4416700 -0.4322500 0.0000000 -0.1587300 -0.1522100 0.0189430 0.0189430 0.4331100 -0.0128340 -0.0092666 -0.1929500 -0.1329000 -0.9880800 -0.0679930 -0.0705090 -0.0705090 -0.0654470 0.4723800 0.4723800 0.0111210 0.0111210 0.0111210 0.0111210 0.4007700 0.3787400 0.3706000 -0.4626900 0.3875000 0.3875000 -0.4491100 -0.4717600 -0.4915200 0.9467000 -0.4624900 -0.5309300 0.4780400 0.8627500 0.4508800 -0.0319900 -0.0062286 0.472 0.472 0.000 0.000 0.401 0.401 -0.463 0.387 -0.458 0.038 -0.445 -0.492 0.947 -0.471 -0.471 0.000 0.421 -0.444 1.033 0.863 0.863 0.451 0.000 -0.426 -0.426 0.000 0.000 -0.152 -0.152 0.000 0.000 0.433 0.000 -0.133 -0.133 0.746 1.734 0.000 0.000 0.000 0.000 0.472 0.472 0.000 0.000 0.401 0.401 -0.463 0.387 -0.458 0.038 -0.445 -0.492 0.947 -0.471 -0.471 0.000 0.421 -0.444 1.033 0.863 0.863 0.451 0.000 -0.426 -0.426 0.000 0.000 -0.152 -0.152 0.000 0.000 0.433 0.000 -0.133 -0.133 0.746 1.734 0.000 0.000 0.000 0.000 8.0066234 -1.7646406 3.6274551 10.6274512 12.0926288 6.3089542 10.8426952 8.3946016 8.1732724 -0.7648857 11.2599271 11.8718059 2.1420213 2.0425043 3.4830676 8.4150429 3.0424868 10.1606882 11.4648538 10.7171854 9.6837663 2.6945682 8.2023599 9.6817001 5.8350474 3.5570669 -0.7648857 NA 10.3956355 6.3644166 5.6697610 8.6791134 5.8789901 10.4544868 10.8146854 1.2351143 9.6739256 1.2351143 5.6360126 12.4906050 7.6079990 6.0680237 -1.7646406 7.4567207 8.6295963 4.6274493 1.5570424 NA 3.7269838 4.5398288 1.5570424 11.2948162 3.4445876 8.1465259 10.6239583 10.2671795 3.1420213 9.2167010 13.0734020 8.6349457 4.7897240 2.9900291 10.3012229 1.0425043 NA NA 1.6945682 12.159833 7.657198 8.082191 13.544503 9.255030 11.203980 13.271565 11.357638 9.020586 11.130898 12.905845 11.985841 9.372765 9.168824 3.093121 8.759676 12.064856 11.1054984 12.0107440 6.0931143 13.0219649 8.3772409 4.7269892 9.3132846 11.0471104 10.5373670 6.0230357 7.2066774 9.4144208 5.6529855 1.5570424 10.7149140 6.9528100 9.3257028 11.4031790 9.5727555 10.7713809 9.5548058 8.9390373 11.7550157 4.1658718 10.6142819 9.4372575 10.4442824 10.2802107 10.8789899 9.1695618 10.2873622 10.8399186 9.1606880 NA 9.1970174 6.4150420 10.7481210 2.9355729 11.1284352 6.8498442 9.9626288 10.1618004 7.5948829 13.2954919 9.9394698 10.1673485 13.2529860 10.2767929 0.5570914 1.4178120 10.3092752 10.6767811 9.7017201 TCGA-A8-A093 61 0 NA 546 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 1 2 NA NA NA 4 1 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 7 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 4 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.323542e-06 8.323135e-07 21.7391304347826 54.3478260869565 2.17391304347826 11.9565217391304 9.78260869565217 10.08140674 10.30274058 12.05635399 9.80462523 8.53428771 9.00030231 10.69612548 9.34473154 10.11542502 13.32917373 11.27785942 10.49295423 2.19572555 13.37881403 4.00306247 8.71927244 7.07134973 8.03581413 10.41867772 13.09360984 1.97331738 14.09436574 2.71028297 9.02407362 10.87970753 5.14324238 -0.61153490 9.09312358 9.18601690 2.19572555 8.35413961 5.93524993 NA 3.74590420 9.76448085 10.15032218 9.95155166 12.11542502 10.28468786 12.22203620 NA 11.89837782 14.86166484 9.90932759 9.35125155 9.34690815 11.67462444 4.95821165 3.14324646 9.42315437 12.27414714 -0.02664588 10.77637274 3.81462220 3.63628819 4.84778650 10.31909278 12.24283428 10.52662727 11.85290121 12.60396429 8.55953235 10.59689462 10.78586168 11.17237675 11.52197937 5.38835488 12.81179969 13.57601682 -1.61175535 10.03085843 8.98547681 3.04656091 4.69213702 10.11670121 10.28884497 10.15239767 10.14616209 0.38835488 7.86408893 12.52966434 10.93452645 10.72262876 9.16067015 2.0315000 2.0362000 0.5350300 0.5155300 -0.0197260 0.5413600 -0.0186280 -0.0186280 0.5315100 0.5315100 0.5315100 -0.0070576 -0.0029091 0.5380100 3.6569000 -0.5759500 -0.0162920 -0.0162920 -0.0162920 -0.0092666 -0.5691000 3.6569000 0.5173400 0.5173400 0.4628000 0.4628000 0.4814800 0.5510700 -0.0224690 -0.0118870 -0.0058140 0.5350300 -0.0197260 -0.0216970 0.5413600 0.5280100 -0.0186280 -0.0186280 -0.0190410 0.5297600 0.5297600 0.5315100 0.5369600 0.5369600 0.5369600 0.5369600 -0.0029091 -0.0029091 0.5380100 -0.5962400 -0.5759500 -0.5759500 -0.0162920 -0.0140070 -0.0095426 -0.0186100 -0.0092666 -0.0092666 -0.5779300 -0.5748600 -0.5648500 0.5173400 0.0087528 0.4628000 0.4814800 0.5510700 0.5345000 -0.0099565 -0.0078863 0.000 0.000 -0.038 -0.576 0.000 0.000 0.000 0.000 -0.569 1.043 -0.560 -0.565 -0.048 0.000 0.000 0.463 0.463 0.000 1.967 0.551 0.551 0.534 0.000 0.000 0.000 0.535 0.535 0.000 0.000 0.541 0.541 0.000 0.000 0.530 0.530 0.532 0.532 0.537 0.537 0.201 0.201 0.000 0.000 -0.038 -0.576 0.000 0.000 0.000 0.000 -0.569 1.043 -0.560 -0.565 -0.048 0.000 0.000 0.463 0.463 0.000 1.967 0.551 0.551 0.534 0.000 0.000 0.000 0.535 0.535 0.000 0.000 0.541 0.541 0.000 0.000 0.530 0.530 0.532 0.532 0.537 0.537 0.201 0.201 7.59780899 -1.61175535 4.65513999 10.55765420 11.53857876 7.26435064 12.15156782 7.95138031 8.54085569 -0.02664588 11.23521696 11.28502277 4.63628239 5.15653819 2.84779652 8.57818019 2.55829213 8.87418465 10.70435404 11.09765471 9.52918514 0.97335412 7.37987738 9.86560771 5.56826321 6.55827988 -0.61153490 NA 10.99198179 7.90405532 6.18925527 8.12644791 6.23384589 10.92217428 11.36903057 3.47582420 8.79668535 NA 6.68756325 12.93549098 8.84778712 7.15654022 NA 3.19570980 8.93428531 -1.61175535 3.08880308 NA -0.02664588 6.20431486 -0.61153490 10.48474114 NA 6.60752414 10.28544453 9.75904279 2.19572555 10.17421652 11.22539201 7.34835725 1.97331738 3.24633207 12.05024486 3.51764105 NA NA 0.71026093 15.3496616 4.6737599 7.9505979 13.3788140 9.9133869 10.9887330 13.0936098 12.5773306 8.7337607 10.5975042 13.1971688 10.1000224 9.4231544 10.4668399 0.7102609 7.4624965 11.9710855 11.4631659 11.3688521 7.9850672 13.4032891 8.9496435 2.7102830 8.9770701 8.9429443 10.6909944 5.0887946 7.5507468 11.2778594 7.2401044 4.8961507 11.3467269 6.5582799 7.1455786 10.2895995 10.9791764 10.0796628 8.7640031 8.7170303 13.1626792 4.0322155 9.5151309 9.9515517 10.4272745 9.5564007 11.5275870 9.7574075 8.4023760 11.1672539 9.1432429 NA 8.6099426 7.9560834 12.2741471 2.9119216 10.7763727 7.6714441 10.3763300 10.3190928 7.6737578 13.9852440 10.0362635 9.7006712 12.7001038 10.6318270 NA 0.9733541 10.5532624 10.3272000 10.1920829 TCGA-A8-A094 75 0 NA 0 breast stage iia t2 n0 m0 female 2009 NA NA infiltrating ductal carcinoma NA NA NA 3 2 4 NA 1 1 2 6 2 2 NA NA 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 5 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4.404326e-06 1.213791e-06 8.64197530864197 61.1111111111111 1.23456790123457 11.7283950617284 17.2839506172839 10.1227351 9.9503833 10.8253491 9.7608576 7.7388793 9.3708753 9.4503098 9.6697548 11.3602885 13.6926672 10.3877886 10.2744957 NA 12.2147074 3.0214620 8.4783737 3.8445865 8.1283816 6.8367270 12.1493616 NA 10.5872276 3.4084945 8.6148431 10.9251165 8.6179431 4.0759176 10.2393085 11.7696593 -0.6789955 8.5034211 7.3978423 NA 5.7804571 10.3783416 10.3640540 9.4859335 10.1154426 10.9787917 10.9241894 6.9430786 10.1766738 14.9176241 6.7766831 9.2473228 10.6642124 10.5813582 3.7133439 4.9934525 8.4321623 11.8028261 1.9060055 10.5268199 5.0214664 7.9283573 5.4909519 10.5790038 11.3965058 9.3871159 11.1215222 12.5897149 6.8984551 10.4315100 9.0493043 11.1825014 10.8960931 4.7804571 10.9653337 9.9458222 NA 10.1594428 9.4295511 1.9131862 5.3654196 8.3125486 9.8514330 9.5426138 9.7133441 2.1283924 7.2635415 12.0627043 11.3146727 9.4631338 8.9648829 -0.125740 -0.162550 0.371790 -0.422080 0.126120 0.484270 0.089738 0.482890 0.000000 0.153410 0.786630 0.753800 0.117000 0.073865 0.017994 0.068410 0.199110 0.199110 -0.339960 0.069127 0.117290 -0.477390 -0.477390 -0.460540 0.048950 -0.247890 0.068123 0.679980 -0.263210 -0.419020 -0.166220 -0.424490 -0.434280 -1.081300 -0.144610 -0.418470 0.089738 0.089738 -0.142680 0.136310 -0.086357 -0.161250 -0.413970 -0.413970 -0.413970 0.144030 -0.442190 -0.065552 -0.450590 0.017994 -0.442080 -0.442080 0.199110 0.199110 0.199110 -0.351760 0.179540 0.138210 0.087422 0.245170 -0.482380 -0.477390 -0.430700 0.048950 0.024720 0.072859 -1.051400 0.226260 0.221640 0.754 0.000 0.000 -0.414 0.199 0.199 -0.352 0.000 0.117 -0.307 -0.435 -0.482 -0.482 -0.452 -0.452 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.222 0.109 0.109 -0.422 -0.422 -0.434 -0.434 0.340 -0.145 0.000 0.000 0.136 0.000 0.787 0.787 -0.201 -0.201 0.000 0.000 0.754 0.000 0.000 -0.414 0.199 0.199 -0.352 0.000 0.117 -0.307 -0.435 -0.482 -0.482 -0.452 -0.452 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.222 0.109 0.109 -0.422 -0.422 -0.434 -0.434 0.340 -0.145 0.000 0.000 0.136 0.000 0.787 0.787 -0.201 -0.201 0.000 0.000 8.4758449 4.3654196 5.6608773 9.4451479 10.8837461 4.3840982 10.0472449 9.2422428 8.6741736 NA 12.0980765 12.5628609 1.3210045 NA 3.4909551 7.8168819 4.1790094 11.5492442 12.1160517 9.9872507 8.9209396 6.1154432 8.4216891 9.2517641 7.4808984 3.9059862 4.4503073 0.3210045 10.7106580 5.9357355 5.5108512 9.6664319 6.7886322 8.5776127 9.3378351 4.5304828 7.5689540 NA 7.4554530 12.1119860 7.7090438 6.6248072 NA 7.3763095 7.5971512 0.9059670 1.9060055 -0.6789955 6.7304171 2.4909551 2.7804571 12.0896246 2.7804571 9.5522479 10.6982372 10.4909517 5.0489467 9.2036698 13.2850065 9.6752761 7.3978423 4.3210261 10.4243145 2.1283924 -0.6789955 -0.6789955 3.0214620 12.0303755 7.3924892 9.5182434 12.2147074 10.0326936 11.2150865 12.1493616 8.4682318 8.9097413 10.5848828 12.4127926 7.3489326 8.4321623 6.3210261 0.3210045 7.0283857 11.5904456 11.004460 13.520239 7.069220 13.979405 8.432162 6.633909 9.482159 8.197544 10.452954 7.121926 4.905991 10.387789 7.102386 2.642956 10.992568 6.530480 9.245661 10.216602 11.077583 11.703110 7.946736 7.828821 10.257665 8.405835 10.257893 9.485934 10.056583 9.365421 11.149163 9.227917 10.417742 10.576055 8.704731 9.651944 8.649522 8.715082 11.802826 8.188305 10.526820 6.836727 10.618516 10.579004 7.021466 13.177258 10.266471 10.229419 11.811125 10.354450 4.021471 4.568956 9.830802 10.888507 9.121927 TCGA-A8-A095 45 0 NA 1277 breast stage i t1c n0 m0 female 2007 NA yes infiltrating ductal carcinoma NA NA NA 1 2 3 NA 5 3 4 4 4 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-06 1.005712e-06 11.8181818181818 67.2727272727273 2.72727272727273 10 8.18181818181818 10.3000505 10.0563311 11.9535342 9.9155282 8.1601926 9.7018945 10.6106435 10.3133185 9.4886715 13.3131728 11.2819031 10.9026767 3.9781224 12.2748391 5.1410608 9.2659352 7.0692704 8.3264654 11.1534820 13.2631727 3.7024913 13.6317463 7.2127833 9.3487414 10.9844789 5.0544752 -0.5454029 9.7955231 10.5963482 0.4545971 7.6833793 7.4769284 0.7765252 3.6640163 10.0348189 10.7668761 11.2749388 12.6725938 10.5179554 11.7066344 9.0460828 11.8808251 14.8133833 8.9228383 9.2497478 11.6057355 11.3911983 4.2874501 1.9139904 9.6169516 12.9004159 -0.5454029 11.4950213 4.3614526 5.3734220 5.2619144 8.9524122 12.2354077 10.5741500 12.4278093 12.8608318 8.1428106 11.0158484 10.9685519 11.6014472 11.2346900 5.0544752 12.4518281 10.4907340 NA 9.7960792 9.2432787 3.3416015 4.8296010 11.4170950 10.6965435 9.6517772 9.8850130 0.4545971 10.9759154 13.1312337 11.9271243 10.2830936 9.6749387 1.21270000 1.18740000 -0.00346270 -0.00346270 -0.00802440 0.37808000 -0.00830050 -0.00830050 -0.01188700 -0.01188700 -0.01188700 -0.00941030 0.00000000 -0.00747200 -0.00290910 -0.00290910 -0.00110870 -0.00166290 0.38221000 0.37578000 0.00263570 -0.00290910 -0.00290910 -0.00290910 -0.01931400 -0.01931400 -0.01931400 0.38006000 0.00610900 0.00110930 0.00041593 -0.00346270 -0.00802440 -0.00802440 0.37808000 0.37808000 -0.00830050 -0.00830050 -0.00830050 0.37759000 0.37759000 -0.01188700 -0.00857660 -0.00857660 -0.00857660 -0.00857660 0.00000000 0.00000000 -0.00747200 -0.00290910 -0.00290910 -0.00290910 -0.00110870 -0.00166290 -0.00166290 -0.25586000 0.37578000 0.37578000 0.00263570 -0.25322000 -0.00290910 -0.00290910 0.00000000 -0.01931400 -0.01931400 0.38006000 -0.00277070 0.00903120 0.00903120 0.000 0.000 0.000 0.000 0.000 0.000 0.374 0.376 0.000 0.731 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.207 0.380 0.380 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.378 0.378 0.000 0.000 0.378 0.378 0.000 0.000 0.000 0.000 0.107 0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.374 0.376 0.000 0.731 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.207 0.380 0.380 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.378 0.378 0.000 0.000 0.378 0.378 0.000 0.000 0.000 0.000 0.107 0.107 8.48108376 NA 5.38529643 10.25181659 11.33968474 6.77387109 11.69951880 9.11883883 7.90151980 1.91399039 10.95066517 10.54156904 3.49895289 1.45454442 2.91399039 8.94038966 2.54203513 10.32145294 11.40657355 11.07432186 9.24978829 4.93029264 8.07477996 9.70604285 6.30005049 5.18248176 5.09841535 NA 10.73126641 6.81211183 5.93837519 8.39413939 8.25222168 9.51052742 10.99250674 2.70248024 8.87662530 -1.54540294 6.91399159 12.87445474 7.86607156 7.42322687 NA 1.77648304 8.09661186 5.09841535 1.91399039 NA 5.16880648 3.45681929 3.09841956 10.64160311 NA 8.10919651 10.45561666 9.55127548 7.04327450 9.54929798 11.70055867 8.76970993 3.09841956 4.03952447 11.09027852 1.45454442 NA 2.03952447 0.03955956 12.054473 7.426104 8.769710 12.274839 10.620723 11.467010 13.263173 12.761121 9.387513 10.803289 13.240983 9.465088 9.616952 9.034819 2.542035 7.361451 11.636489 11.262519 12.256168 7.825248 13.713089 9.258683 5.673729 8.839344 10.244094 10.711692 6.255461 9.088464 11.281903 6.493479 4.235918 11.390462 4.993720 8.483792 10.167087 9.935855 10.946163 8.326465 8.242463 13.054822 5.408756 10.385726 11.274939 10.384558 9.941395 10.459834 9.869774 10.889449 10.573826 9.682176 -1.545403 9.344992 7.909888 12.900416 4.664016 11.495021 7.343304 9.821429 8.952412 8.047018 13.908892 10.057723 10.467883 12.957516 10.764605 2.913990 NA 10.696246 11.277131 9.737070 TCGA-A8-A096 73 0 NA 0 breast stage iia t2 n0 m0 female 2009 NA NA infiltrating ductal carcinoma NA NA NA 1 1 3 NA NA NA 4 1 3 4 NA NA 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 6.935946e-08 31.8181818181818 4.54545454545455 0 22.7272727272727 40.9090909090909 10.78672883 10.38217796 11.79778010 10.35065978 8.09683215 9.67147915 10.58009412 9.59790655 10.32550402 12.25261600 10.79896520 10.55486144 0.06336488 12.56951836 3.44192164 9.42271951 7.22328063 8.34510758 9.51585632 13.14139315 3.41390544 13.56882378 7.19886244 9.99269721 10.11434607 6.51955763 -0.67346265 12.62580999 9.90198280 2.20091233 8.48883471 7.20908680 -2.25842515 5.43496843 10.07910299 10.48568423 10.88629864 10.71499904 10.18597838 10.90842873 -2.25842515 10.61223112 15.40931334 8.65975548 9.80991681 12.27815325 11.53701344 4.34139517 -2.25842515 9.32126836 11.38375845 -0.25859773 11.58373320 6.64234779 7.67369563 5.56802906 10.84427697 11.86390466 10.43757929 12.42770801 13.05956485 8.11434620 10.99975265 10.61789250 11.19539472 11.59644682 5.79132962 11.98055743 10.57476655 NA 10.56504732 9.05152573 1.20219828 6.85000551 11.02572684 10.26749120 9.86527921 9.45099572 2.98941153 8.61184590 13.24247852 12.26962990 9.98762784 9.86366191 0.62333000 0.62333000 -0.00055444 -0.01010900 -0.00609040 0.00471900 -0.00678130 -0.00678130 0.00485790 0.00485790 0.00485790 0.00197890 0.00791750 0.00666530 0.00666530 0.00666530 -0.00152430 -0.00152430 -0.01092200 0.00249690 0.01113800 -0.00083160 -0.00083160 -0.00083160 -0.00415460 -0.00415460 -0.00415460 0.01684500 0.00638710 0.00638710 -0.00816240 -0.00055444 -0.00609040 -0.01543100 0.00471900 0.00471900 -0.00678130 -0.00678130 -0.00678130 0.00750000 -0.60226000 0.00485790 0.00138680 0.00138680 0.00138680 0.00138680 0.00791750 0.00791750 0.00666530 0.00666530 0.00666530 0.00666530 -0.00152430 -0.00152430 -0.00152430 -0.01092200 0.00249690 0.00249690 0.01113800 -0.61575000 -0.00083160 -0.00083160 0.00000000 -0.00415460 -0.00415460 0.01684500 -0.00332430 0.01209700 0.01209700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.616 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.616 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.17402284 -2.25842515 4.95093493 10.48820528 10.85652474 6.58055857 11.65109296 9.62347441 8.89559679 -2.25842515 11.93246314 11.81087295 6.23733618 0.32642230 3.35618608 8.69858313 5.50966418 12.34005704 11.52826119 10.88406686 8.77765478 5.03610326 7.86430936 10.28716959 7.64536302 5.34139517 0.74148856 0.54883115 11.36490538 3.62412430 7.91515815 8.64987373 5.23333590 10.22023550 10.72518729 5.58697186 8.73016577 NA 8.21721472 12.97285227 7.39253295 7.49970400 -2.25842515 0.06336488 8.44884026 5.63022489 2.95093493 NA 6.01294405 4.70368214 3.87075925 10.26895808 NA 6.47957334 10.25199797 9.81662594 5.80757131 9.98465500 14.33214121 10.04554713 6.23733618 4.08133110 10.83341226 4.34139517 NA NA 0.06336488 13.76652826 5.05436229 8.17819275 12.56951836 10.61353064 10.26308149 13.14139315 12.90379373 9.33253586 11.04683037 13.15613329 10.51996898 9.32126836 9.04469110 0.06336488 7.33206789 11.38025634 11.0926964 11.8758272 7.0902088 13.3638166 9.2502662 6.4863154 8.4719511 9.0796602 10.0507442 8.4787284 7.3653627 10.7989652 8.0441198 -1.2584252 11.4283099 6.9941464 6.6349649 13.1761419 9.9429924 10.8715689 7.8220590 8.2883756 12.7612890 6.2845123 11.2856692 10.8862986 10.8654408 9.7868995 11.9557243 10.1278825 9.1418269 10.8154553 9.6913079 NA 9.7489675 8.6767272 11.3837584 5.5162673 11.5837332 8.8707642 10.5080099 10.8442770 7.9000909 14.1355250 10.0802174 10.4434373 13.2624066 10.1885642 1.2009437 0.5488312 10.2350864 10.7617665 9.9721020 TCGA-A8-A097 65 0 NA 365 breast stage iib t2 n1 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 2 1 NA NA NA 2 2 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 1.942065e-06 8.669932e-07 7.31707317073171 24.390243902439 3.65853658536585 35.3658536585366 29.2682926829268 10.0786058 10.4016935 11.3491723 10.0669594 9.2723380 9.3608445 9.0944678 10.0366790 10.0731583 13.1555826 10.1496855 10.7695339 2.6436253 14.9880075 4.9274082 9.4504098 4.2899746 8.4181157 8.2363969 12.5726162 NA 12.3286686 4.1644484 9.4030084 11.4828189 6.9144689 -1.8799135 9.6362456 10.8892712 3.9014172 7.9873317 7.4863757 -0.8799135 4.0026935 9.9981041 10.4975348 9.2698002 11.9380361 9.7343028 11.3392217 2.5123786 9.9229734 14.9555485 9.2562240 9.6784642 11.2238327 12.4710614 6.5166582 6.8170207 9.2774002 11.3939944 -1.8799135 10.8859608 8.5080705 6.6119056 5.0507890 10.4948210 11.8117967 10.2833883 11.9224686 12.8595701 8.4204058 10.7402730 10.5658440 10.8900976 10.9483880 5.3392229 12.0555866 9.9394339 0.1200865 10.3261518 8.0684204 3.5449799 5.6357544 9.4809002 10.6507034 10.7573573 9.4988899 3.9014172 7.7439343 12.8542335 10.7955692 10.3536729 9.0720664 0.776370 0.945470 0.333510 -0.012258 0.298190 0.330860 -0.329940 -0.407160 3.339900 -0.830980 3.656900 0.866520 -0.417510 -0.428330 3.172600 -0.432080 -0.419150 -0.051181 0.309530 0.477180 0.227000 -0.412340 2.987100 0.831760 0.836080 0.356750 0.946290 0.345830 -0.395300 0.610220 -0.129790 0.333510 -0.051181 0.292940 0.285170 0.262380 -0.329940 -0.374260 -0.735560 0.563180 -0.055364 -0.836480 -0.424290 -0.424290 -0.043942 -0.037082 -0.417510 -0.417510 0.229010 -0.457040 -0.422740 -0.404730 -0.419150 -0.051181 0.000000 -0.047026 0.477180 -0.439080 0.204570 -0.411350 -0.412340 0.787850 0.389820 -0.472890 0.261690 -0.051586 -0.041974 -0.092213 -0.045228 -0.205 -0.418 -0.428 -0.428 0.000 0.000 0.310 -0.439 0.201 0.350 0.000 0.419 0.832 0.390 0.390 -0.104 0.141 0.000 0.972 0.000 0.000 0.000 -0.102 0.277 0.147 0.329 0.000 0.000 0.000 0.262 0.262 -0.330 -0.330 0.563 0.000 -0.836 -0.423 -0.424 -0.424 0.000 0.295 -0.205 -0.418 -0.428 -0.428 0.000 0.000 0.310 -0.439 0.201 0.350 0.000 0.419 0.832 0.390 0.390 -0.104 0.141 0.000 0.972 0.000 0.000 0.000 -0.102 0.277 0.147 0.329 0.000 0.000 0.000 0.262 0.262 -0.330 -0.330 0.563 0.000 -0.836 -0.423 -0.424 -0.424 0.000 0.295 8.297473 NA 6.441981 9.803925 12.112991 6.883896 10.734303 9.206428 8.822252 3.705016 11.396759 11.601425 4.142422 3.512366 3.847977 8.293731 3.579482 10.996954 11.626609 11.387718 9.058163 NA 8.055218 9.655815 6.002696 6.678473 3.120053 NA 11.146404 6.674641 7.085838 7.488560 6.153477 10.676296 10.739127 5.062566 9.840725 -0.294951 7.065497 12.408343 9.066228 7.103046 -1.879914 6.987332 8.687059 NA 3.367986 -1.879914 4.689909 4.630225 2.441988 10.805021 1.927403 8.706893 10.863415 9.655329 4.441981 9.907548 12.341263 8.283703 5.085837 5.927408 10.831720 2.120053 0.705049 2.026942 1.579470 14.9702850 6.3961783 9.2980956 14.9880075 10.2055256 10.6106534 12.5726162 13.0650854 8.8199466 10.3209518 13.0597701 9.7195011 9.2774002 8.3488720 -0.8799135 8.7693093 11.4614330 11.0852963 11.1174091 8.2167682 14.4790281 9.4852819 5.8882367 8.3404314 10.0415223 10.1226783 7.4054555 4.9274082 10.1496855 7.7087680 3.4054615 10.5937589 7.2101658 7.8361526 11.7524804 10.0156284 10.5914744 9.5951228 8.9911882 12.0855669 5.4863765 10.9488739 9.2698002 10.9934973 9.8148463 10.3169625 9.5053763 11.3896182 10.7746891 9.0611009 NA 9.2392278 7.4350218 11.3939944 5.3774396 10.8859608 8.6494836 9.8167122 10.4948210 8.6804147 13.9131992 9.5075320 9.8428607 12.9463534 9.6298282 3.0269417 0.1200865 10.7833889 10.1228681 10.0789683 TCGA-A8-A099 76 0 NA 304 breast stage x t4b n3a mx female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 1 2 NA 2 2 4 1 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.040392e-07 4.76190476190476 38.0952380952381 9.52380952380952 23.8095238095238 23.8095238095238 10.9456767 10.7731940 11.1628865 9.5250472 8.7005209 9.6935816 10.3231396 8.7917252 9.4308253 13.6227748 8.5772540 10.4109374 1.5498663 13.2669427 3.8717747 9.0055513 5.9730625 8.2949901 7.8552902 13.5170440 1.0904470 13.5548051 6.6139810 9.7147528 10.9290319 5.5082702 -0.9096885 10.7797617 10.2594043 2.0904131 7.2325255 6.0676989 NA 4.8848323 9.5343984 10.3586685 10.6004412 10.5592974 10.6312734 11.3061036 NA 11.8471837 14.4909315 9.2313254 9.5250472 12.3324765 11.7319062 3.9730602 6.8717784 8.1884509 11.5775052 -1.9094175 11.5554751 3.9973105 4.9973105 3.5166834 10.0974462 11.9829617 9.9980606 11.4817968 13.0951660 8.5722182 11.0202321 10.9567377 11.3768322 10.4263675 5.5822730 11.6158173 11.0748373 -0.3246357 9.8697279 8.2414355 2.0922074 4.5661515 10.4269255 9.6387592 9.7808534 9.2261282 0.4122938 9.7786692 11.7386641 10.6597998 10.2640961 8.5436896 1.59430000 1.58210000 0.03073200 0.02366100 -0.01422800 0.00471900 0.00069327 0.00000000 0.03383100 0.03383100 0.03059100 0.01279500 0.01279500 -0.00968060 -0.00968060 -0.00968060 0.00346870 0.00346870 -0.81597000 0.03510000 -0.02644100 0.02511000 0.02511000 0.02511000 0.00194180 0.00194180 0.00194180 0.05209900 -0.81612000 -0.83114000 -0.04360200 0.02366100 -0.01422800 -0.02000100 0.00471900 0.00471900 0.00069327 0.00000000 0.02048300 0.03510000 -0.82944000 0.04122000 -0.04102400 -0.78950000 -0.04642700 -0.04468600 0.01279500 0.01279500 -0.01436600 -0.00968060 -0.00968060 -0.00968060 0.00346870 0.00346870 0.00346870 -0.81597000 -0.82952000 -0.82952000 -0.02644100 -0.81310000 0.02511000 0.02511000 0.00777830 0.00194180 0.00194180 0.05209900 0.02034300 0.02202400 0.02202400 0.000 0.000 0.000 0.000 0.000 0.000 -0.816 0.000 0.000 0.000 -0.813 0.000 0.000 0.000 0.000 0.000 0.000 0.778 1.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.829 0.000 0.000 0.000 0.000 -0.111 -0.111 0.000 0.000 0.000 0.000 0.000 0.000 -0.816 0.000 0.000 0.000 -0.813 0.000 0.000 0.000 0.000 0.000 0.000 0.778 1.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.829 0.000 0.000 0.000 0.000 -0.111 -0.111 9.1672345 NA 6.3758214 10.1221201 10.6509906 6.4917681 12.4488641 8.8974277 9.1634960 -0.9096885 11.7437118 10.7716177 0.6753643 5.3478074 3.0904131 8.4880936 3.7051264 10.5734789 11.4456323 11.6622900 9.3700295 5.4912984 7.6977495 9.8892957 5.9669357 2.0904131 NA NA 11.1737320 7.9058022 4.3383460 8.4891628 3.9973105 9.7373420 10.8486421 4.0446127 8.1551618 4.6602726 6.4347150 12.5137318 8.6080885 6.7839058 NA -1.9094175 8.9129896 NA 4.4479692 NA 4.1989420 5.8530325 2.5498416 9.8635582 NA 6.4784364 9.9878862 10.2575234 3.2603419 10.7925916 12.3651610 8.0152316 2.9483953 2.0904131 14.3545316 2.1778859 NA 1.7908554 -0.9096885 10.5169457 4.0676989 8.7707785 13.2669427 9.9280468 11.5847745 13.5170440 12.0927944 9.4385937 11.2195409 13.1714862 7.6678474 8.1884509 8.7654936 -0.9096885 7.9654005 11.4972882 10.9724887 10.7463968 8.3560337 13.3452250 8.2080622 4.8717796 8.2145401 8.8144722 10.3071799 6.5498509 4.3941986 8.5772540 4.8453044 -1.9094175 10.2842522 4.0446127 5.3322604 12.0451604 10.1255616 10.4260884 7.0387862 7.1963277 13.0248008 3.1348124 10.7130519 10.6004412 9.6995976 9.9460660 8.7908587 9.3838904 9.4880936 10.8687014 9.5590430 NA 9.3254519 6.4734752 11.5775052 3.1348124 11.5554751 4.4827386 9.1950175 10.0974462 7.1805308 12.7236412 9.4123469 10.6478826 12.9161727 9.5847744 -0.9096885 NA 10.1040905 10.4773591 9.7557549 TCGA-A8-A09A 40 0 NA 304 breast stage x t2 nx m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 2 2 1 NA 3 2 3 4 2 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.60098e-06 6.935946e-07 8.33333333333333 18.75 3.125 37.5 32.2916666666667 10.3853904 9.8004279 11.5760181 10.7344303 9.5259119 8.6144699 9.6588133 9.9949045 9.4981583 14.7934468 11.4400554 10.9367313 0.4428639 14.1583732 3.6652677 9.2480822 4.4428772 8.8351933 9.4661683 12.7856913 1.6652563 13.3909997 4.7648026 8.7096625 11.2231422 9.2010991 NA 8.0203049 9.9539696 2.4428639 7.5824273 7.5373931 1.6652563 4.2502340 10.6644630 10.6963295 9.4990620 10.5587865 10.0070253 12.3621117 4.8351914 10.2356662 14.9946442 8.1255194 10.0152603 11.5428811 11.8017102 3.7158934 5.9559451 10.0234485 11.1963712 NA 11.3495160 5.4872709 5.9559451 4.7648026 10.4306136 11.6229922 9.5712999 12.1099874 12.8411742 8.1129420 10.7255783 10.3873879 11.3152943 11.0719289 4.6908026 11.9503402 11.1685261 NA 10.4895451 9.4105824 3.0286399 5.5017703 10.0630957 11.0465022 10.7689308 10.7037954 3.6652677 8.3557651 12.3271736 10.8837451 9.5409080 9.5522712 0.4312500 0.0284750 0.3747800 0.4278800 0.1334600 0.7095200 0.7094400 -0.3838100 1.8882000 2.6499000 0.6791900 0.6292600 -0.1135200 0.3924600 0.4188100 0.4188100 0.1911600 0.1911600 0.0831910 0.8916500 -0.0403510 -0.3444700 0.4573400 1.0030000 -0.1654700 -0.1654700 0.3106400 0.4369800 -0.1297200 -0.1120800 -0.5011100 -0.3337600 0.0370700 -0.0208300 -0.4677000 -0.6242700 0.7094400 -0.3838100 -0.6689200 0.2794700 0.1413100 -0.3529400 -0.4277900 -0.3384900 -0.0073403 0.0577890 -0.1135200 -0.1135200 -0.1732300 0.4188100 -0.5650600 -0.2314200 0.1911600 0.1911600 0.2087000 -0.0890150 -0.3346800 -0.3346800 -0.2436300 -0.1461900 -0.3444700 0.4573400 -0.3373400 -0.2483700 0.3106400 -0.0127200 -0.3459600 -0.0468600 -0.0863920 0.118 0.005 0.324 0.324 0.191 0.191 0.000 0.130 -0.203 0.128 0.000 -0.299 0.457 0.000 -0.337 -0.165 -0.165 -0.112 0.306 0.437 0.437 -0.346 0.000 0.000 0.000 0.041 0.375 0.000 0.000 0.404 -0.305 0.000 -0.233 0.141 0.141 0.254 0.679 -0.331 0.000 0.000 0.000 0.118 0.005 0.324 0.324 0.191 0.191 0.000 0.130 -0.203 0.128 0.000 -0.299 0.457 0.000 -0.337 -0.165 -0.165 -0.112 0.306 0.437 0.437 -0.346 0.000 0.000 0.000 0.041 0.375 0.000 0.000 0.404 -0.305 0.000 -0.233 0.141 0.141 0.254 0.679 -0.331 0.000 0.000 0.000 7.7557589 -0.1420986 5.6260974 10.0618731 11.7956550 6.0354326 10.4513045 9.5013366 8.9901303 3.1798454 11.4965755 11.5942477 3.1058457 0.8579014 4.3497686 8.6507035 3.4428772 10.3622358 11.7749124 10.9644763 8.7420840 2.6652791 7.8150156 9.7640523 6.8179148 6.3091252 1.4428639 NA 10.4990620 7.2799782 7.1105783 8.3457534 6.3091252 9.8821111 10.6136355 4.6392727 8.1571215 1.1798295 7.3892949 12.4217055 8.2351239 7.2502311 NA 8.1798414 8.0452655 NA 4.0278352 -0.1420986 6.1058415 4.7166398 3.6128007 10.6153034 -1.1420986 10.8200864 10.1582660 10.0963181 4.8579113 10.0569721 12.5050345 8.9077620 4.5858339 3.0278441 13.6818776 2.3173330 NA 0.4428639 2.3173330 13.131128 5.728277 8.761795 14.158373 10.534069 9.903673 12.785691 12.248620 9.120502 11.199710 12.736156 9.848017 10.023448 7.976854 1.179829 8.400945 12.892454 11.3181133 11.4913627 6.8913366 13.8349692 8.9131958 6.7034039 8.5618168 8.8565037 10.4809673 6.9559451 8.6277513 11.4400554 5.0867328 4.5017703 11.3590041 5.5161255 7.1125167 11.9343950 10.3765665 10.4680155 8.1058410 8.6716946 11.3728739 6.4277687 11.5872643 9.4990620 9.8222542 9.9340609 10.9046963 9.8865102 11.1983199 10.7557589 9.1305433 NA 8.7454081 7.7587802 11.1963712 5.5858339 11.3495160 7.2022091 10.1205955 10.4306136 7.3173448 13.3608073 9.6523293 9.7534887 12.7699606 10.1282087 -0.1420986 4.9691551 10.7989610 10.6265112 10.2614581 TCGA-A8-A09B 58 0 NA 365 breast stage iiib t4b n1a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 1 2 NA 4 2 4 1 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 2.427581e-07 29.0322580645161 22.5806451612903 0 45.1612903225806 3.2258064516129 10.2211432 10.3085318 11.8888641 9.4311541 8.7096339 9.0829660 10.7215867 9.4376903 10.0019747 13.5953252 10.2642738 10.5492046 3.1222751 13.2303752 4.0019733 9.4201939 7.1718993 8.4542606 8.5145862 13.0547199 3.7638152 13.6407254 4.0330000 10.4778949 11.5670354 4.6076972 -0.5215976 8.2873767 10.0958803 2.0633649 8.7156226 7.6025341 NA 3.2857721 9.8359648 10.0353976 11.7791943 12.1623943 10.4934793 11.8000590 8.9057254 12.2903894 14.7311151 9.0562852 9.7186079 11.7247080 11.5815366 6.2663162 5.6878669 9.2548458 12.2719145 NA 10.7938454 4.8707297 4.8182626 4.1222669 9.5241724 11.8520936 11.1075417 12.4200106 12.7063295 8.7060287 10.7045239 10.4500749 11.0624357 11.2305843 4.7821936 12.0283177 11.5347118 NA 10.5698481 9.2198798 4.4358619 4.6878669 11.1204644 10.2720161 10.3610558 9.8957378 4.7638152 9.1849088 13.5459732 11.3922371 10.5289416 9.2905901 1.18730000 1.19470000 0.21530000 0.39413000 -0.40407000 0.43800000 0.34502000 0.34502000 0.43902000 0.43902000 0.43902000 0.15263000 -0.34056000 -0.35886000 -0.36352000 -0.36352000 -0.07641200 -0.07641200 -0.36420000 -0.07080400 -0.04441500 0.23519000 0.23519000 0.23519000 0.20899000 0.20899000 0.21299000 -0.00013862 -0.23667000 -0.26741000 -0.24423000 0.21530000 0.10818000 -0.39286000 0.43800000 0.43800000 0.34502000 0.34502000 0.34502000 0.19535000 0.21330000 0.43902000 -0.54159000 -0.54159000 -0.54159000 -0.54159000 -0.34561000 -0.00027724 -0.35886000 -0.36352000 -0.36352000 -0.36352000 -0.07641200 -0.07641200 -0.07641200 -0.86153000 -0.07080400 -0.07080400 -0.02205800 -0.54966000 0.23519000 0.23519000 -0.34194000 0.20899000 0.20899000 -0.00013862 -0.26893000 -0.23594000 -0.23594000 -0.329 -0.329 -0.364 -0.364 0.000 0.000 -0.364 0.000 0.000 0.439 -0.545 0.235 0.235 -0.342 -0.342 0.209 0.209 -0.267 0.920 0.000 0.000 -0.269 -0.236 -0.274 -0.274 0.215 0.215 0.000 0.000 0.438 0.438 0.345 0.345 0.213 0.213 0.439 0.439 -0.542 -0.542 0.000 0.000 -0.329 -0.329 -0.364 -0.364 0.000 0.000 -0.364 0.000 0.000 0.439 -0.545 0.235 0.235 -0.342 -0.342 0.209 0.209 -0.267 0.920 0.000 0.000 -0.269 -0.236 -0.274 -0.274 0.215 0.215 0.000 0.000 0.438 0.438 0.345 0.345 0.213 0.213 0.439 0.439 -0.542 -0.542 0.000 0.000 8.1823164 1.0633649 5.1649150 11.0301210 11.3299666 7.6062009 11.2811311 8.4811996 9.2860977 2.4784024 11.3379475 11.4187520 3.4784153 1.4784024 4.7451997 9.0156311 3.3363977 10.2797169 10.9101715 10.8604964 9.1831810 8.0614954 8.2046308 10.2461834 5.2063346 7.1186577 3.8003408 -1.5215976 10.6750149 7.1041217 5.6483389 7.9439793 7.7215866 11.5152869 10.8257573 4.1222669 9.2249271 NA 7.1995124 12.1249715 9.1797193 7.4952211 NA 6.7821936 8.9571824 4.1788501 4.8003408 -0.5215976 3.6483389 6.9696651 0.8003305 10.0454181 -0.5215976 7.7545375 10.9033663 9.7839045 3.5228090 9.7667022 11.4384147 7.5632214 2.8707395 2.2857573 11.3764472 2.0633649 NA 0.4784024 2.1788421 12.5283464 5.5336942 8.2921942 13.2303752 9.6508403 11.1032082 13.0547199 12.9112808 8.8909826 10.7138287 13.1668270 10.6645270 9.2548458 10.5231484 0.8003305 7.6433194 11.5097694 10.956677 11.702867 7.285767 13.075237 8.785614 5.219881 9.078326 9.152605 9.942606 6.565876 8.543156 10.264274 5.986208 3.835964 10.699698 5.500780 6.983350 10.866161 9.967759 10.395785 9.775902 8.495221 12.119448 4.285765 12.168040 11.779194 10.027235 10.005401 11.546519 9.879826 10.201647 10.457123 8.908865 NA 9.173284 6.070048 12.271914 4.544504 10.793845 7.246597 10.256272 9.524172 7.196090 13.156408 9.794694 9.756281 13.008575 10.880092 -1.521598 NA 10.096798 10.375880 9.642062 TCGA-A8-A09C 69 0 NA 31 breast stage x t2 n0 mx female 2009 NA NA infiltrating ductal carcinoma NA NA NA 1 1 1 NA 2 2 4 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 3.467973e-07 17.3913043478261 4.34782608695652 4.34782608695652 21.7391304347826 52.1739130434783 10.8805404 9.6513034 11.2377592 9.6665903 8.2702280 9.4866516 10.1075296 10.1633771 9.4340245 14.2805112 11.5131433 11.0932234 6.4084894 12.3204228 3.3716564 8.5824499 8.3449789 8.1098615 8.8174525 13.4803124 3.8712227 13.7261302 5.1135838 9.3052743 11.3461663 9.7285979 -0.4864082 7.4938114 12.1340062 2.6011260 7.6532234 7.2415923 NA 2.6011260 9.8048425 10.6694387 9.3418083 11.8988601 9.8355998 11.6806194 2.2141248 11.9152180 14.2907729 7.5981612 9.2492277 11.4118952 11.0802016 3.7231216 1.8356007 10.2888705 10.7541650 -0.4864082 11.3115359 4.0986301 4.7990718 4.9894070 10.8384149 12.2402092 10.2184400 11.3687349 12.9727191 7.9081344 11.1012149 10.8348276 11.5959872 10.9888985 4.8535217 12.6810115 11.6932699 NA 9.7822138 9.3646398 5.2842365 4.7424913 11.5035984 11.0137667 10.5199979 10.8034025 0.5136929 7.8288213 12.2235095 10.6640537 10.0323249 9.5415778 1.0521000 1.0964000 0.0072217 0.4876800 -0.5260400 -0.5714000 0.4132900 -0.5442100 0.5253800 0.5253800 0.5210100 0.0256710 0.0256710 -0.5603700 2.7266000 3.6569000 0.3670900 0.3670900 0.1813200 0.5463000 -0.5217400 -0.5334800 -0.5251200 0.0855100 -0.1508000 -0.1508000 -0.1508000 0.2869100 -0.5181500 -0.5356100 -0.1545200 0.0072217 -0.6305500 0.0033299 0.7614000 -0.5566700 0.4132900 -0.5442100 -0.5511000 0.0108420 -0.0015176 0.5102500 -1.1477000 -1.1253000 -0.1179600 -0.1144300 0.0256710 0.0269350 -0.5449200 -0.0065050 -0.5516600 -0.5635500 0.3670900 0.3588800 0.3588800 0.1813200 0.5463000 0.5577900 -0.5164800 0.0203430 -0.5308300 -0.5251200 0.0000000 -0.5123900 -0.1508000 0.2869100 0.0290440 -0.5219400 -0.5219400 0.000 0.000 0.000 0.000 0.367 0.367 0.181 0.546 -0.514 0.000 0.000 -0.531 0.000 0.000 0.000 -0.151 -0.151 -0.536 0.517 0.287 0.287 0.000 -0.522 -0.133 -0.133 0.000 0.000 -0.526 -0.526 0.600 0.600 -0.123 -0.536 0.000 0.000 0.525 0.525 -1.125 -1.125 0.000 0.000 0.000 0.000 0.000 0.000 0.367 0.367 0.181 0.546 -0.514 0.000 0.000 -0.531 0.000 0.000 0.000 -0.151 -0.151 -0.536 0.517 0.287 0.287 0.000 -0.522 -0.133 -0.133 0.000 0.000 -0.526 -0.526 0.600 0.600 -0.123 -0.536 0.000 0.000 0.525 0.525 -1.125 -1.125 0.000 0.000 8.0547682 NA 4.6429557 10.9919358 12.2410605 7.1691664 11.4819785 8.0787358 8.1953845 0.8356007 10.8813595 10.8750015 2.4205632 3.0372416 3.0372416 8.3274529 3.6429557 9.0025160 11.3038166 11.1110260 8.3242436 4.4678664 8.1665166 9.6097280 5.3210261 6.4678680 0.5136929 -1.4864082 10.5245495 6.9230624 5.9145502 8.3338508 5.8082924 10.4508727 11.0050238 3.0372416 8.7316296 -0.4864082 7.1860974 12.9396088 9.2752229 6.6117036 -0.4864082 8.2950314 8.3178029 3.7990769 3.0372416 NA 3.6835954 4.5398102 1.6836066 11.1384672 2.0986217 6.2347715 10.9682281 10.5087323 3.6011379 9.3848071 11.3907641 7.3993685 3.1575288 2.0986217 11.8197335 2.7616044 NA -0.4864082 1.8356007 14.005042 6.128382 8.094873 12.320423 10.867466 10.878901 13.480312 11.448653 11.745343 11.170544 13.190015 11.782798 10.288870 9.283510 2.420563 7.752076 11.792992 11.0197314 12.4302044 8.1952792 13.0297399 8.6810897 4.6429557 9.4780126 8.0214664 11.1550146 5.2001708 9.0095269 11.5131433 5.7034967 3.0986385 11.8104446 3.6429557 8.5088877 10.2892821 10.2483814 10.8973761 9.4965013 8.8930500 11.9731034 4.2141093 12.6927800 9.3418083 10.7813363 10.1288416 11.1995156 9.9283570 10.0749597 10.7056563 8.3258491 NA 9.1987885 7.6585593 10.7541650 2.5136676 11.3115359 6.8712239 10.6390853 10.8384149 7.6117036 14.4992914 9.8635058 9.9320514 12.3032054 10.5794245 0.8356007 -0.4864082 10.5659001 10.7412877 10.0725708 TCGA-A8-A09D 47 0 NA 1522 breast stage iib t2 n1 m0 female 2007 NA yes infiltrating ductal carcinoma NA NA NA 1 1 1 NA NA NA 1 4 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 4.508365e-07 15.1515151515152 24.2424242424242 0 36.3636363636364 24.2424242424242 9.2758631 10.1270708 11.7957689 9.8520895 8.3217834 8.5580556 10.3763317 10.2735282 10.0711699 14.5158367 10.3424259 11.0177661 2.3819755 12.1710102 3.8108235 10.0186029 6.4162486 8.2361276 8.0717074 12.2570778 2.0034583 13.2683783 3.1409749 8.9933551 11.2606187 8.7066780 0.2665167 10.5495894 10.1913135 3.6357312 9.7449335 6.9898781 NA 5.0034673 9.9294660 10.0489533 9.7469546 10.2953280 10.2182714 11.6339158 13.3179366 10.0813505 15.1434815 8.7977264 10.8719774 11.5865494 11.6028216 4.1733913 6.9715573 9.2138945 11.1151240 NA 11.1368657 7.1450630 6.1653552 6.0565770 10.4800103 11.4015690 9.9995164 11.6573865 12.6330965 7.3610182 10.7045998 10.1160729 10.8079204 11.5420436 5.0390901 11.5704720 10.6955590 0.6814942 10.3054200 8.8185298 3.2826474 6.2051012 11.2987764 10.2627391 11.2437809 11.5936794 2.3819755 7.8787554 11.9085527 10.9890240 9.7011293 9.2119450 -0.12733000 0.00930980 1.17220000 0.01824300 0.01126100 0.00110930 -0.00166290 -0.02479800 0.00388540 0.00388540 3.42380000 0.49995000 -0.04292400 0.00388540 -0.05226100 -0.49923000 -0.01560400 3.65690000 -0.00609040 3.10250000 -0.00871460 -0.03435900 -0.55677000 0.93895000 -0.03585700 -0.03585700 -0.03585700 3.65690000 -0.12733000 -0.12733000 0.01978600 -0.53906000 0.01126100 0.01098200 0.00332990 0.00332990 -0.00166290 -0.02479800 0.00527490 0.00569190 0.00513590 0.00388540 -0.04251700 -0.04251700 0.44172000 0.00277450 -0.04292400 -0.04292400 0.00388540 -0.05226100 -0.53296000 -0.53296000 -0.01560400 -0.54179000 -0.54945000 -0.00609040 -0.45329000 -0.45329000 -0.00429290 -0.00027961 -0.03435900 -0.54865000 -0.54623000 -0.03585700 -0.03585700 0.00000000 -0.03313200 0.48871000 -0.56744000 0.500 0.500 0.000 -0.499 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.546 -0.546 0.000 0.000 -0.127 0.000 3.657 3.657 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.543 -0.543 0.000 0.000 0.000 0.000 0.500 0.500 0.000 -0.499 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.546 -0.546 0.000 0.000 -0.127 0.000 3.657 3.657 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.543 -0.543 0.000 0.000 0.000 0.000 8.3361745 -0.3185058 6.7795710 10.2313232 12.0896029 6.8805239 10.3240416 9.6750147 8.5549825 1.0034583 11.6286275 11.8470313 5.0738545 5.6004006 4.2962518 8.5441759 4.5884268 9.9858899 11.7094445 10.2650914 8.9506652 4.7039091 7.4661736 9.7623561 7.2999242 9.7245659 NA -0.3185058 10.5729425 5.8414096 7.8108216 8.6616780 6.9436330 10.6090424 10.1678708 4.5395187 8.3163494 0.6814942 8.3957839 12.0364766 7.4464101 8.3181632 -1.3183259 8.6871632 7.4196307 5.2361290 5.7476264 NA 4.9294644 3.8566670 2.3819755 10.8636225 1.4888749 8.5641815 10.2594394 9.1703828 4.6357370 9.7822008 13.1748937 9.8127525 4.0034673 3.8514592 9.9983858 2.9294691 NA -1.3183259 1.8514792 12.8771860 5.9669403 7.8414096 12.1710102 10.0728466 10.3181632 12.2570778 11.8193302 8.2361276 10.8423554 12.5176875 10.1109452 9.2138945 7.7610233 0.2665167 7.9483252 13.0067737 11.394280 12.639185 4.747629 13.006491 8.857712 6.173391 8.778254 7.551904 10.183525 6.976160 9.036890 10.342426 6.934204 1.488875 10.635735 5.073855 7.893451 11.356613 10.625152 9.783514 8.461258 9.591432 12.104786 5.266502 11.603952 9.746955 10.011895 9.783514 11.582217 10.621852 10.358818 10.763688 9.283309 6.980746 8.939563 6.938927 11.115124 2.588421 11.136866 7.650205 10.451789 10.480010 7.495319 13.168311 10.650925 9.952418 11.831444 10.561887 3.266502 1.003458 10.176394 9.677306 9.670933 TCGA-A8-A09E 73 0 NA 1492 breast stage iiib t4b n1a m0 female 2008 NA yes infiltrating ductal carcinoma NA NA NA 1 1 1 NA 2 2 1 1 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 1.387189e-07 13.3333333333333 20 3.33333333333333 43.3333333333333 20 9.1480576 9.6365782 11.1060635 8.8826562 8.7719090 9.0948599 9.2580666 9.6110682 10.4703798 14.2877487 9.9643943 10.7801986 NA 13.7448380 3.0917844 8.9964924 7.6181997 7.2248150 8.3704498 12.9752658 2.0918014 13.8319534 4.0917929 10.2830057 11.1634955 8.7525957 -0.3677318 7.9632747 10.5952538 -0.3677318 6.5630956 5.0753016 NA 2.0918014 9.8665764 9.9441060 10.6825465 10.0643777 9.1191927 11.1184386 NA 10.2976937 14.5727631 6.3434398 9.6883180 11.7537294 10.9783173 5.9632753 6.1637382 8.4620805 10.3034564 -1.3677318 9.4856673 3.8802839 3.8802839 4.1242123 10.6906878 11.6321816 10.1060635 11.1156697 12.6908569 9.7622847 10.2603475 10.0835688 10.9105168 10.0887122 5.4397129 11.3731926 11.3142550 0.2173548 10.2243475 9.2580666 3.7257521 4.1559192 10.9674689 10.1724858 10.1191927 9.6498622 -0.3677318 10.0182202 13.1248995 10.0073972 10.6135682 8.5850989 1.35780000 1.48800000 0.49683000 0.54030000 -0.43583000 0.03524200 0.51560000 -0.53195000 0.61843000 0.61843000 0.99156000 0.40377000 -0.57851000 0.01195800 3.65690000 3.65690000 -0.00041585 -0.00041585 0.01922300 -0.05886600 0.30956000 0.39363000 1.30830000 0.42402000 0.32914000 0.32914000 0.32914000 0.47907000 -0.57723000 -0.54598000 -0.17787000 0.49683000 -0.75124000 -0.35738000 0.03115500 0.03115500 0.51560000 -0.53195000 -0.58714000 -0.08604900 0.03425400 0.61843000 -0.53946000 -0.53946000 -0.00304750 -0.13083000 -0.55869000 -0.56495000 0.01195800 3.65690000 -1.13020000 -1.13020000 -0.00041585 -0.00041585 -0.04410700 0.00110930 -0.05886600 -0.05886600 0.52660000 -0.02096100 0.39363000 0.42402000 -0.54552000 0.32914000 0.32914000 0.47907000 -0.00401620 -0.07947600 -0.12200000 0.404 -0.146 -1.126 -1.126 0.000 0.000 0.000 0.000 0.310 0.442 0.000 0.394 0.394 -0.546 -0.546 0.329 0.329 1.041 1.587 0.479 0.479 0.000 0.000 0.000 0.000 0.497 0.497 -0.436 -0.436 0.000 0.000 0.024 -0.492 0.000 0.000 0.912 0.912 -0.536 0.000 0.000 0.000 0.404 -0.146 -1.126 -1.126 0.000 0.000 0.000 0.000 0.310 0.442 0.000 0.394 0.394 -0.546 -0.546 0.329 0.329 1.041 1.587 0.479 0.479 0.000 0.000 0.000 0.000 0.497 0.497 -0.436 -0.436 0.000 0.000 0.024 -0.492 0.000 0.000 0.912 0.912 -0.536 0.000 0.000 0.000 9.1773221 8.4169925 5.7719093 10.2883356 11.5841889 7.0454353 11.9148670 8.9860670 9.5175050 NA 11.9956712 11.5318431 3.0246743 -1.3677318 3.7616363 8.4557250 1.6323613 10.5019516 11.2419982 11.0643776 9.0866569 3.7198187 7.5332246 9.7953783 5.6435849 5.8991442 0.9542708 NA 10.7221392 5.0417468 4.3602800 6.5150012 3.9542894 10.2325587 10.2140291 2.8022759 9.5489837 NA 7.6547255 11.8634289 8.0586223 6.6547262 -1.3677318 5.5027220 8.6519486 5.5630940 3.2762138 NA 3.3327938 4.3199791 1.2172928 10.6581894 1.4397295 6.4652480 10.7519474 10.1720013 3.0917844 10.3388538 14.0882629 7.8047854 1.8022759 3.3872385 12.4054970 0.9542708 NA 2.4397029 -1.3677318 13.6563312 7.2135582 8.1141572 13.7448380 9.9497704 11.5959764 12.9752658 11.0260163 9.3208003 10.5616162 13.6153068 10.4182188 8.4620805 9.3353962 -0.3677318 7.8921008 11.3461739 11.1037790 12.0174112 6.9632741 13.1412042 7.9223769 4.1559192 8.9200702 9.6781173 10.1684932 5.1715151 7.6740171 9.9643943 8.4699857 0.9542708 9.9937533 4.4903391 8.2587968 8.6505578 9.1811796 10.6089219 6.5027220 9.1608118 11.0517913 4.6984463 9.5317750 10.6825465 10.3876626 12.9992263 10.8013432 10.7024787 9.4786317 10.6305956 7.4809808 -0.3677318 8.3644065 5.8991442 10.3034564 3.9542894 9.4856673 5.3602765 10.6114828 10.6906878 6.6323584 12.6329740 9.6869622 8.8743408 12.4457381 10.3431642 2.5392581 NA 9.7953783 9.6664688 8.8122668 TCGA-A8-A09G 79 0 NA 0 breast stage iiic t3 n3a m0 female 2008 NA NA infiltrating ductal carcinoma NA NA NA 3 2 2 NA 5 1 2 6 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.172992e-06 1.560588e-06 8.03571428571429 72.3214285714286 4.01785714285714 9.375 6.25 9.8961235 10.1742944 11.9771108 9.5634966 8.3648359 10.0402264 10.9767822 9.9850848 10.6781655 13.0750829 9.9475643 10.4325438 0.2920749 15.6019983 2.5399529 8.2316129 4.3794962 8.0199543 7.2607003 13.0522337 4.6139618 11.8197549 5.6495867 8.7003634 11.8436216 7.0733929 1.8769982 11.7809532 11.4317448 2.7514637 9.7888873 7.0766681 NA 5.7182986 10.5929581 10.4038213 9.1296614 11.8182883 10.6424203 12.3286365 7.3391579 10.9723930 14.8636381 8.2468114 10.5579415 9.6462829 11.2107105 4.0469188 0.6140030 9.1800158 11.4869443 NA 11.7671336 4.6318842 6.8580879 4.4619607 10.1650930 11.7841371 9.4917058 11.6371615 12.7955488 4.9213887 10.3884192 10.0339218 10.2632178 11.4846346 5.0864484 12.4907088 10.0709320 4.2920308 10.0593904 8.7535129 3.0549179 5.3032620 10.7923775 9.5154320 10.2049228 10.2385743 1.0993625 10.3230454 12.4781478 11.5573556 9.9551468 9.8047740 0.53467000 0.53467000 0.00097064 0.00388540 -0.55497000 -0.01532900 0.01293400 0.01293400 0.01642500 0.01642500 0.01642500 0.00180300 0.00180300 0.00083195 0.00360760 0.00360760 -0.59760000 -0.00360110 -0.58403000 0.02202400 -0.00968060 -0.59078000 2.58530000 3.65690000 -0.32030000 0.16355000 -0.08054100 -0.02192100 -0.30979000 -0.55457000 -0.22730000 0.00097064 -0.55497000 -0.55497000 0.01564100 0.01564100 0.01293400 0.01293400 0.00208050 0.01129700 0.00819590 0.01642500 0.02216400 0.02216400 0.00319100 -0.00512650 0.00180300 0.00180300 0.00083195 0.00360760 0.00360760 -0.00166290 -0.55457000 -0.00360110 -0.00360110 -0.55427000 -0.01301100 -0.01301100 -0.00968060 -0.57011000 -0.59078000 0.94119000 -0.55887000 -0.61201000 -0.60854000 -0.02192100 0.00166420 -0.04414400 -0.04414400 0.000 0.000 0.000 0.000 -0.551 0.000 -0.554 0.000 0.000 0.000 -0.543 -0.547 -0.547 -0.559 -0.559 -0.320 -0.320 0.000 0.535 0.000 0.000 0.000 0.000 -0.189 -0.189 0.000 0.000 -0.555 -0.555 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 -0.551 0.000 -0.554 0.000 0.000 0.000 -0.543 -0.547 -0.547 -0.559 -0.559 -0.320 -0.320 0.000 0.535 0.000 0.000 0.000 0.000 -0.189 -0.189 0.000 0.000 -0.555 -0.555 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 7.6429730 6.0402261 5.4519034 9.9286581 11.7738330 5.2418021 12.7781143 9.1529731 8.0149946 0.2920749 11.1453431 11.6061693 2.6843475 0.2920749 3.0469275 7.6800507 3.5774409 11.6915785 12.0680553 11.0269548 9.4296651 4.2462333 8.0114224 10.1554455 7.5681583 4.4213176 NA NA 11.2899186 4.7182959 5.6929126 9.0028400 4.9644587 9.8484486 10.3261447 4.0993878 8.8057613 NA 7.5446987 12.4036583 8.1608562 7.3282073 -1.7079251 7.6473843 7.6139618 4.8155959 1.6139559 -0.1229625 6.8350651 4.9679893 4.0199509 9.9195674 -0.1229625 6.7718143 11.0462947 9.7230086 5.3364262 10.6413148 13.5369919 8.5280477 4.5399591 3.8769982 9.8087186 1.2920160 NA -0.7079251 1.8769982 12.507718 6.835065 8.109017 15.601998 9.893340 11.293090 13.052234 9.246957 9.210897 10.165862 13.046921 7.821464 9.180016 6.935890 4.935889 10.734459 12.160181 11.582340 13.225217 8.131238 14.564025 8.445586 7.426460 9.052754 11.146707 10.518142 7.964459 8.233081 9.947564 5.246229 0.614003 11.180777 6.899364 8.123942 12.241313 10.719608 11.111614 7.823415 9.150015 9.826823 8.464461 11.816589 9.129661 10.649586 10.205297 11.853083 10.370851 10.914543 11.002194 9.758620 NA 10.169697 8.466760 11.486944 8.257818 11.767134 5.658357 10.920023 10.165093 8.240401 12.898497 10.064761 10.881685 14.072291 10.033922 5.622951 2.292045 10.756834 11.369517 9.710940 TCGA-A8-A09I 84 0 NA 1371 breast stage iia t2 n0 m0 female 2008 NA no infiltrating ductal carcinoma NA NA NA 3 2 1 NA 2 1 2 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.017137e-06 9.363527e-07 23.4782608695652 41.7391304347826 3.47826086956522 15.6521739130435 15.6521739130435 10.3743797 10.1900738 11.2067924 9.2703911 9.1610991 9.3815438 9.3424725 10.4384438 10.2607693 13.9709029 10.9969341 11.1329462 -2.3204861 17.5108856 3.5624500 8.1676444 6.2797164 8.7738820 8.8874287 12.8418414 NA 13.7807334 0.2647166 9.4543647 10.7687580 4.5866927 -0.3201259 10.1146930 11.9703271 0.4871776 7.7526068 6.9205958 -2.3204861 4.1060719 9.8257363 11.2043459 9.3539965 11.4144080 9.8324059 11.1430731 -2.3204861 10.7228314 14.1570249 8.5041266 8.4446758 9.6332732 12.1230715 4.7132284 3.3802446 8.9019952 10.9329130 -1.3201259 11.0296383 4.1555388 7.3991933 5.3732898 10.6924287 12.1221646 9.8196752 11.8248606 12.9293991 7.8621984 11.2780894 10.6999160 11.2419273 10.7381342 4.8090851 11.9961564 8.6952192 -1.3201259 10.1681465 9.1417952 2.6335242 6.3415820 10.8040870 9.4995840 10.1105180 9.8106965 0.2647166 8.0039844 11.7463139 11.2400176 9.9477613 8.7519366 0.9875400 0.9863800 0.3833300 0.0260920 0.0250150 0.0372170 0.0230050 -0.3474400 0.0508190 0.6762700 0.7543300 0.2296200 -0.1259000 2.1317000 0.4076100 0.7021400 -0.2165100 0.3661800 -0.6655900 -0.2944900 0.0892720 -0.7100600 3.6569000 3.6569000 -0.3098500 -0.3098500 -0.3098500 0.5647200 -0.6888700 -0.6907000 -0.4005200 -0.7015400 -0.3228600 -0.3407900 0.0372170 0.0372170 0.0230050 -0.3172700 -0.3474400 0.1000200 -0.2950300 -0.0077482 -0.2918900 -0.2918900 -0.3012600 -0.2819200 -0.1259000 -0.1259000 -0.2927200 -0.0223320 -0.7131000 -0.7131000 -0.1033300 0.3661800 0.3661800 -0.2980400 -0.3344500 -0.0471240 0.0892720 0.0468420 -0.7100600 -0.6978500 0.0243520 -0.2897600 -0.3098500 0.5647200 -0.2934300 0.0267950 0.0148880 0.000 0.000 -0.700 -0.700 -0.103 0.263 -0.269 -0.322 0.000 0.000 0.000 -0.710 0.000 0.000 0.000 -0.310 -0.310 0.300 0.988 0.565 0.565 -0.293 0.000 0.000 0.000 0.000 0.000 -0.323 0.000 0.000 0.000 0.000 -0.294 0.000 -0.289 0.000 0.000 -0.292 -0.292 0.000 0.000 0.000 0.000 -0.700 -0.700 -0.103 0.263 -0.269 -0.322 0.000 0.000 0.000 -0.710 0.000 0.000 0.000 -0.310 -0.310 0.300 0.988 0.565 0.565 -0.293 0.000 0.000 0.000 0.000 0.000 -0.323 0.000 0.000 0.000 0.000 -0.294 0.000 -0.289 0.000 0.000 -0.292 -0.292 0.000 0.000 9.068897826 7.274128383 4.525292152 10.466890546 13.102098948 5.991279203 10.963760640 8.511586240 8.536883221 0.001730196 11.450158333 11.411638675 3.809085118 2.809085118 4.089193037 7.675571087 4.338017864 11.302771136 11.038867356 11.482623449 9.156044132 5.272262125 7.632545239 9.428416288 5.598665934 3.264761600 1.679784089 NA 10.035705829 7.539338749 7.733729881 8.187599018 6.187599513 10.120154269 10.699221149 2.586692697 8.088134175 -2.320486121 6.411122828 12.485144998 7.840935872 5.839674950 -1.320125852 7.103970697 8.785058105 -2.320486121 0.849759124 NA 5.568545958 5.675739730 2.380230735 10.930102619 2.139240270 5.735086162 10.566262909 10.408362437 4.054839796 10.006795352 14.547674104 8.435526505 3.537780612 3.407719837 11.546986361 2.139240270 NA 3.264761600 -0.735283431 13.320356 7.588197 8.669199 17.510886 9.517602 11.628171 12.841841 12.346749 9.574243 10.453356 13.407379 9.503569 8.901995 8.725564 1.139208 10.758122 12.087072 10.974712 12.430563 7.482321 13.042774 8.297272 5.525295 9.088664 9.007918 10.348592 6.824462 3.562450 10.996934 4.366301 -2.320486 10.621585 8.720779 9.287943 10.041474 9.947176 11.020767 7.667068 8.994954 11.564070 6.676984 10.721884 9.353997 10.082550 10.090521 11.173409 9.206792 10.463416 10.534673 9.289906 2.203358 8.347980 10.509230 10.932913 6.483935 11.029638 7.700784 10.383924 10.692429 7.540969 12.988890 10.005391 9.780138 11.557280 10.356643 3.234394 -1.320126 9.945419 10.076677 9.058099 TCGA-A8-A09K 68 0 NA 912 breast stage iia t1c n1 m0 female 2008 NA no infiltrating ductal carcinoma NA NA NA 1 1 1 NA 5 3 1 1 1 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 2.427581e-07 23.3333333333333 26.6666666666667 3.33333333333333 20 26.6666666666667 10.9567803 9.5620113 12.3417307 10.0822091 9.5859638 8.6433999 11.1722453 9.3005862 10.5244943 13.4867709 10.2952689 10.8407927 NA 12.9370508 3.5620104 7.4128679 5.2303913 8.5938602 9.0989524 13.2106900 4.1122080 15.2114440 1.9245940 9.2868664 11.7906583 8.9005885 0.3395935 10.9726142 8.7059413 -1.2453690 7.4376514 5.6853936 NA 3.1469810 10.4706184 10.2079271 9.6742647 10.2012229 10.0475532 11.8016099 4.2465069 11.8834564 14.9898106 9.0073929 11.5368356 11.8038243 10.6001465 3.2782227 0.3395935 10.0995072 9.8010983 NA 10.1777723 4.9834771 6.6434002 4.3092417 9.4341365 12.0149880 9.2762568 9.9561678 12.9130295 8.2263317 11.0970090 11.0953495 11.0190990 11.6439703 5.6853936 12.3306683 12.0196854 NA 10.2253153 9.4944370 2.6625018 5.0945063 10.3306683 9.6971711 11.7269183 10.5903121 2.5620104 8.8592552 11.2460086 9.6357704 10.8996333 9.4411571 0.2330300 0.3683800 0.3961200 0.4412200 0.0107030 -0.0953840 -0.4484900 -0.4381000 0.7510800 -0.9010700 0.9878300 -0.0136770 -0.0161540 0.3672300 -0.4453400 -0.4453400 0.1441400 0.0169810 -0.4036200 -0.4392900 0.2573000 -0.4558600 -0.4414500 2.1236000 -0.0585960 -0.0585960 -0.0585960 0.3638100 -0.0324500 0.2330300 0.0000000 0.3961200 0.4079400 0.0102850 -0.4322500 -0.4322500 -0.4340900 -0.4412900 -0.4451200 -0.4481400 0.0774230 -0.9400500 -0.0172540 0.5161200 -0.0179410 -0.0666540 -0.0161540 -0.0066432 0.4014400 -0.4453400 -0.4453400 -0.4453400 0.0098669 0.0093098 -0.0107840 -0.4353900 -0.4345300 -0.4600300 0.2573000 -0.4625400 -0.4558600 -0.4414500 0.3832000 -0.1684100 -0.0585960 0.3169100 0.3206000 0.3805600 0.3805600 0.000 0.000 0.367 -0.269 0.000 0.000 -0.438 -0.460 0.257 0.260 -0.452 -0.456 -0.456 0.339 0.339 0.000 0.000 0.000 0.233 0.364 0.364 0.321 0.381 0.000 0.000 0.396 0.396 0.398 0.000 0.000 -0.424 -0.441 -0.441 0.637 0.000 -0.918 0.008 0.000 0.000 0.000 0.000 0.000 0.000 0.367 -0.269 0.000 0.000 -0.438 -0.460 0.257 0.260 -0.452 -0.456 -0.456 0.339 0.339 0.000 0.000 0.000 0.233 0.364 0.364 0.321 0.381 0.000 0.000 0.396 0.396 0.398 0.000 0.000 -0.424 -0.441 -0.441 0.637 0.000 -0.918 0.008 0.000 0.000 0.000 0.000 8.0629954 NA 2.9245750 10.6600435 13.1863499 8.0861782 11.1682844 9.8238645 9.1340348 4.7319381 11.8232668 11.5007173 5.9145286 1.9245940 0.3395935 8.0214431 2.7546524 10.4230983 11.2367081 11.3903746 9.7742473 NA 8.2140879 9.8254483 6.9345660 3.7990458 NA NA 9.0167512 7.1555357 3.8839433 7.5128795 3.0025765 10.9874131 10.8553188 3.0025765 8.0833315 -0.2453690 5.2782190 12.8033988 9.0002091 5.3985111 NA 9.8180515 8.8180517 2.8421140 3.3985146 1.3395935 7.0261195 6.8591508 3.3985146 9.7110326 NA 5.5875450 9.8677475 9.5819991 5.2465107 9.9671529 12.8167026 8.3619867 5.7204399 3.7088494 12.5842801 NA NA 2.2140937 NA 13.275091 6.085573 8.723323 12.937051 9.855319 10.106148 13.210690 14.901762 8.272326 10.964719 12.412868 11.112483 10.099507 7.809939 -1.245369 8.430614 11.313795 10.782217 11.627716 7.906941 13.808030 8.919551 6.587547 9.938292 8.414652 10.591799 6.618842 8.123163 10.295269 6.455095 3.076576 10.686133 3.661544 7.489637 8.491059 10.544598 10.335386 10.527383 9.343371 11.619616 8.226332 13.048232 9.674265 11.051859 9.443781 12.396144 7.720441 9.811294 10.491481 9.181969 NA 9.094963 4.944479 9.801098 7.571640 10.177772 2.562010 11.309245 9.434137 7.373042 13.194033 10.124254 9.879424 11.260220 9.817377 2.214094 NA 10.763085 10.425313 10.435895 TCGA-A8-A09M 75 0 NA 1006 breast stage iiic t2 n3a m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 3 2 1 NA 1 2 1 1 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-06 7.976338e-07 9.52380952380952 21.4285714285714 4.76190476190476 39.2857142857143 25 9.45177901 9.43334424 11.20680223 8.59864398 9.36728981 9.57596594 9.75051489 9.04088750 8.72285090 13.06437898 11.11030249 10.19328029 3.15239437 12.88912801 3.03210084 8.15599001 6.65827862 8.23815248 10.47323350 12.49009896 5.10844500 12.90453432 3.93479954 9.49579568 11.23368486 8.54195462 -0.49146993 12.02483742 9.51134667 0.09356018 6.63781453 6.65827862 NA 4.48581321 9.70943022 10.09208465 9.26425375 9.25672457 10.08501601 11.17519953 0.83049873 11.41879961 13.97680569 9.77796227 10.28660882 9.94002929 10.89385484 2.90085715 0.83049873 8.92110155 10.78057823 0.83049873 9.42515756 5.30294776 6.40334954 5.23645052 9.68781884 11.85241137 10.21200276 10.46272801 12.90466815 8.40637723 10.52533992 10.34069778 11.06072045 10.71463027 3.75645758 12.43037260 10.79422284 -1.49126712 10.43742012 8.99837972 4.00230647 5.95147590 10.26758765 10.93846143 10.97026691 9.86112693 2.09349257 9.07648775 11.24746835 10.53988831 9.53089944 8.79508929 -0.1785300 0.7309400 -0.1757500 0.4288900 0.1149800 -0.0070576 -0.1680200 -0.6703900 0.1923800 0.1923800 1.7244000 -0.3362900 -0.0408880 0.1677500 0.1647500 0.1647500 0.1398400 0.1398400 0.5233000 0.1933000 1.4907000 -0.6395300 0.1757300 1.0986000 0.1303600 0.1700100 -0.2072200 1.3797000 -0.3802200 0.1536700 -0.6646700 -0.6591900 -0.3706500 0.3236600 -0.3507600 -0.3507600 -0.1680200 -0.6703900 0.3119300 -0.1893600 0.2139200 -0.6957700 -0.4745500 -0.3360600 -0.3360600 -0.1739800 -0.5170200 0.4376700 -0.1835800 0.1647500 -0.6571500 -1.0275000 0.1398400 0.0536640 0.0536640 -0.6634600 -0.6529500 -0.5357500 -0.2923600 -0.6552900 -0.6421000 0.1757300 0.4361400 -0.3203000 -0.2072200 0.0038854 -0.0883740 0.1872200 -0.6521100 0.000 0.000 0.168 -0.489 0.000 0.000 -0.663 0.193 0.130 -0.439 -0.625 -0.412 0.176 -0.225 -0.225 0.130 -0.077 0.731 0.731 0.000 1.376 0.000 0.876 0.000 0.000 -0.176 0.253 0.000 0.000 0.000 0.000 -0.168 -0.168 0.171 0.171 1.724 1.724 -0.336 -0.336 0.000 0.000 0.000 0.000 0.168 -0.489 0.000 0.000 -0.663 0.193 0.130 -0.439 -0.625 -0.412 0.176 -0.225 -0.225 0.130 -0.077 0.731 0.731 0.000 1.376 0.000 0.876 0.000 0.000 -0.176 0.253 0.000 0.000 0.000 0.000 -0.168 -0.168 0.171 0.171 1.724 1.724 -0.336 -0.336 0.000 0.000 9.59466797 NA 3.46273292 10.19896628 11.77341403 7.05673741 11.22385022 7.66297023 9.27368512 NA 11.43055850 12.22792262 4.79393229 4.73735146 4.79393229 7.74693615 3.63781888 11.09278957 11.55821008 10.56787615 9.08596049 -0.49146993 7.37889652 9.76001414 7.05927848 7.66081669 NA NA 10.00438664 4.34142364 8.16316761 8.44516966 7.68595136 11.28210158 9.72770012 4.34142364 8.27340306 NA 6.20201801 11.45671638 9.50782714 7.20549906 NA 7.67845648 8.50005351 NA 3.71798892 NA 6.32871083 4.30112667 2.75646826 10.51555891 NA 5.59599589 10.30781328 10.14379632 5.06311892 9.65827880 14.26237518 9.02028439 6.56381403 4.12324405 13.41936176 0.09356018 NA 0.50853007 2.20898539 13.7719931 6.7277000 8.9730774 12.8891280 10.3146785 10.5288171 12.4900990 14.2200642 9.0764877 10.2158908 12.1496803 10.6006281 8.9211016 7.7421511 0.5085301 7.8461535 11.3251154 10.91260878 11.79147529 7.30943179 13.40012316 8.61050740 6.51415699 8.72648930 8.86608362 9.80612440 7.01235748 6.15238829 11.11030249 7.32871083 0.09356018 10.28701949 3.09349257 7.77882687 9.22019861 10.24620154 10.29398415 8.83158657 9.28907134 11.08217885 8.13424045 12.50282499 9.26425375 10.18272395 10.40864372 12.37899273 9.36651259 9.90674091 10.75021699 8.33349037 NA 8.76268633 7.16316761 10.78057823 7.66840282 9.42515756 5.27671625 10.85836579 9.68781884 7.51724026 13.50637271 10.06743060 9.74813028 12.42692910 9.66334978 2.20898539 -0.49146993 10.31145191 9.63523617 9.86937870 TCGA-A8-A09N 57 0 NA 31 breast stage iiic t2 n3a m0 female 2006 NA NA infiltrating ductal carcinoma NA NA NA 1 2 4 NA NA NA 2 2 5 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.491228e-06 8.669932e-07 21.1267605633803 47.887323943662 2.8169014084507 16.9014084507042 11.2676056338028 10.159059 10.100050 12.198974 9.182002 7.558595 8.161260 11.471706 9.419337 9.018027 13.695918 11.247687 10.908634 3.125635 12.236380 2.611054 9.767326 4.585065 8.452964 9.038525 13.320454 2.803702 13.463704 8.234160 8.902437 11.373326 5.636599 NA 8.139098 10.977073 2.973630 9.011942 6.187411 NA 3.196025 10.459238 10.526942 9.301560 10.851172 9.242500 12.034779 -0.196277 10.673687 15.188323 8.852835 10.273350 11.314472 10.404085 2.504137 2.611054 8.790972 11.371664 NA 11.320885 4.051633 5.598124 4.932992 10.130699 11.602584 10.605012 11.045393 12.368572 6.891170 9.922000 9.775970 10.939417 11.800358 5.107487 12.084478 11.432381 2.504137 10.379720 9.235205 2.803702 4.734444 11.157957 9.318422 10.667507 10.342382 1.388686 9.901740 11.596905 10.377828 10.457896 9.159059 -0.2426500 -0.0066432 -0.0237030 0.0000000 0.0702430 0.1333200 0.1389500 0.2073300 -0.7449900 -0.7449900 0.5364300 0.0655130 0.0619370 0.0607940 0.0895610 0.0895610 0.1284500 0.0957980 -0.7641500 -0.7276500 -0.1840800 -0.6976700 -0.6780200 0.1144800 -0.6440500 -0.2002500 -0.1743600 0.1813200 -0.2176300 -0.2426500 -0.6919700 0.0132130 0.3533200 0.0891270 0.0726310 0.0726310 0.1578600 0.9758500 -0.7673200 0.1022000 0.0803120 -0.7582800 -0.7394100 -0.7394100 0.5770100 -0.2543100 0.0458490 0.0363180 0.1626500 0.0895610 0.0580810 0.0653700 0.1284500 0.1121300 0.1059800 -0.7380100 -0.6986600 -0.6887000 -0.7551900 -0.6916000 -0.6976700 -0.6780200 -0.7374900 0.2145300 -0.1743600 0.1884400 0.1260900 -0.6859700 -0.6859700 0.000 0.000 0.000 0.000 0.117 0.117 -0.738 -0.699 -0.172 -0.515 -0.707 -0.682 -0.682 -0.727 -0.727 -0.644 -0.644 -0.218 -0.218 0.147 0.147 0.126 -0.686 -0.710 -0.710 0.000 0.000 0.000 0.000 0.000 0.000 -0.608 -0.747 0.000 0.000 -0.744 0.431 -0.736 0.000 -0.111 -0.111 0.000 0.000 0.000 0.000 0.117 0.117 -0.738 -0.699 -0.172 -0.515 -0.707 -0.682 -0.682 -0.727 -0.727 -0.644 -0.644 -0.218 -0.218 0.147 0.147 0.126 -0.686 -0.710 -0.710 0.000 0.000 0.000 0.000 0.000 0.000 -0.608 -0.747 0.000 0.000 -0.744 0.431 -0.736 0.000 -0.111 -0.111 8.602989 4.636596 4.891171 10.852195 10.786701 8.057768 11.948366 8.853869 8.666516 -1.196277 11.878184 11.066672 -0.196277 2.388658 1.125651 7.817728 2.611054 10.609452 11.585477 10.390078 8.451166 3.327271 7.772375 10.569822 6.365950 1.973648 NA NA 10.842627 8.364041 5.922650 8.904370 5.279442 9.505673 9.943259 3.196025 8.872486 NA 5.490207 11.713413 7.279442 6.483189 NA 5.388672 7.655457 NA 2.388658 NA 4.932992 9.216140 1.803723 11.986878 -0.196277 6.524807 10.975823 10.054598 3.558598 10.131822 12.503389 8.068151 3.932987 2.504137 10.008279 1.388686 NA NA 2.891166 13.471735 5.388672 9.058736 12.236380 10.016204 10.868787 13.320454 12.977775 9.381136 11.083318 13.015216 9.642124 8.790972 8.167843 2.504137 7.555252 11.813711 11.458791 12.469044 6.722571 13.775025 9.749152 5.358298 9.296562 8.744755 11.104135 6.152435 9.084478 11.247687 6.598124 -0.196277 10.660522 2.611054 7.909538 9.871142 9.949003 10.441238 7.388670 9.099477 12.048963 5.125635 11.900686 9.301560 10.005219 10.319900 10.245614 9.902398 10.302058 12.087953 9.714350 9.877849 9.972668 8.065497 11.371664 4.826076 11.320885 5.901741 10.179833 10.130699 7.757904 13.622190 10.402691 11.017723 12.034779 9.938776 1.611078 NA 10.735553 10.453862 9.256978 TCGA-A8-A09Q 83 0 NA 761 breast stage iiib t4b n2a m0 female 2008 NA no infiltrating ductal carcinoma NA NA NA 3 2 1 NA NA NA 1 1 2 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.462261e-06 7.282743e-07 30.4347826086957 16.304347826087 2.17391304347826 25 26.0869565217391 10.1790463 10.0217869 11.7987322 9.5496451 8.4254304 8.2505206 9.7316243 9.5677926 10.0700002 12.5128125 10.5665483 10.6322473 0.7098200 11.9709662 3.9114423 8.8452642 5.9424723 8.4005080 11.7299581 12.7705075 NA 13.2461559 0.9728397 9.4425419 11.4600161 6.9309147 2.0883112 12.6389960 9.8802374 1.8473155 8.6893795 6.5677918 0.9728397 5.7277326 10.0638405 10.2172097 9.9280115 11.2682323 10.7232738 11.2370931 2.5578022 11.0521085 14.9009942 8.8308061 9.3991106 11.8412827 10.9219431 4.6916626 5.0743855 9.8088963 11.1591666 -1.6121963 11.0536634 5.2458645 7.5603107 5.7972750 10.1729271 11.5011373 10.1498501 11.3145501 12.8799870 6.9915094 10.1486034 9.8661778 10.9986777 11.4407911 4.8178330 12.5507468 12.5249546 -1.6121963 10.0554385 9.7081200 3.2463625 6.7188000 9.0943794 10.1847343 9.9643677 11.4957544 2.5578022 7.3906986 12.3126032 10.9709662 10.1225930 8.7940883 0.4208300 0.4790700 0.9676100 0.9049200 -0.1741100 0.6636400 0.6831000 -0.3362900 0.2180600 -0.0579240 2.8642000 0.2133000 0.2133000 0.2262300 0.8055800 0.2259200 1.0063000 1.6333000 -0.5677300 0.0287630 0.0097276 0.0086135 -0.0655810 1.1221000 -0.0915520 0.4407100 0.4407100 0.0884100 -0.1218800 -0.0542860 -0.2864400 0.9426200 -0.0110600 -0.0761490 0.1695600 -0.2901100 -0.0395290 -0.6249300 -0.0604800 1.2009000 -0.5886300 -0.8541600 -0.3036900 -0.3036900 -0.3164500 -0.2892800 0.2133000 0.2695400 0.2262300 0.2262300 0.2259200 0.2259200 -0.2881000 -0.5725900 -0.5615700 -0.5691200 0.0287630 -0.0084385 0.0000000 -0.5353100 -0.0183530 -0.0655810 -0.3001600 -0.1126000 0.4407100 -0.8657000 3.6569000 -0.8043500 0.8882600 0.213 0.213 0.226 0.226 -0.288 -0.288 -0.569 0.000 0.000 -0.007 -0.541 0.000 0.000 -0.868 -0.868 0.000 0.416 -0.122 0.266 0.000 0.000 -0.556 0.000 -0.299 -0.299 0.905 0.905 0.000 0.000 0.588 0.000 0.123 0.123 -0.309 0.168 -0.853 2.149 -0.289 -0.289 0.177 0.177 0.213 0.213 0.226 0.226 -0.288 -0.288 -0.569 0.000 0.000 -0.007 -0.541 0.000 0.000 -0.868 -0.868 0.000 0.416 -0.122 0.266 0.000 0.000 -0.556 0.000 -0.299 -0.299 0.905 0.905 0.000 0.000 0.588 0.000 0.123 0.123 -0.309 0.168 -0.853 2.149 -0.289 -0.289 0.177 0.177 8.3259926 1.3878588 4.3420782 10.1680130 11.6735746 6.2313652 10.9131595 8.7322458 8.2812610 3.5171623 12.8984004 11.3802448 2.4753443 1.5578267 3.6358124 8.3347899 4.2705289 10.0254140 11.6135428 10.0922195 9.2215642 1.7098200 7.8837387 9.6663328 7.7802012 4.9877983 NA NA 11.1510958 5.7188000 5.9877961 8.8380637 4.5973345 10.0607551 10.0721937 4.7277353 8.8297903 -1.6121963 7.1790462 13.1220109 7.3651632 6.6916640 NA 2.1952531 8.4526263 4.8636164 4.5171686 -1.6121963 6.7844883 6.5699801 3.7454310 10.5334973 -1.6121963 6.6825045 11.1147402 9.1577213 5.5677918 10.0514416 12.5227108 10.1230164 5.3765682 4.1158073 9.9089931 0.9728397 -1.6121963 0.3879139 1.1952216 13.678956 5.557808 8.480641 11.970966 9.437051 10.753932 12.770507 12.115910 9.310468 11.609286 12.819250 11.952033 9.808896 8.800453 -1.612196 8.139428 10.776977 10.6796297 11.9709662 6.2520693 13.5479510 8.5439664 6.6358110 8.7131889 8.9347780 9.9221815 7.3794052 5.9114447 10.5665483 6.5376300 0.3879139 10.8248552 3.7098089 7.6376371 10.6908079 10.2012638 10.4250872 9.1469393 9.0181507 16.6420678 7.7887627 12.3065334 9.9280115 10.3241533 9.9975239 10.9082566 9.8261555 10.7810057 10.1903998 9.4329605 0.7098200 8.8912023 6.9533281 11.1591666 8.2597885 11.0536634 6.6405486 10.6721292 10.1729271 7.7054091 14.3447814 10.1643165 10.6295687 12.1877721 9.9544133 5.8797376 2.4753443 10.5319043 10.1936274 9.3355203 TCGA-A8-A09R 82 0 NA 273 breast stage iib t2 n1 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 1 1 NA 3 2 1 2 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 1.075072e-06 2.427581e-07 21.0526315789474 13.1578947368421 2.63157894736842 36.8421052631579 26.3157894736842 10.9654728 10.7966637 11.7511236 10.2594663 8.9558867 9.3353631 9.5084277 9.7363490 9.9164629 14.1437508 10.5831552 10.4923722 -0.2115649 13.6022832 4.0363978 8.7270682 5.0236856 8.1591559 6.3633779 13.0152320 1.6629346 13.9078961 1.0108514 9.2540349 11.4723404 7.9449732 NA 12.4429756 9.3557909 5.9848650 8.4419109 7.1043734 0.2035144 4.5785463 10.1208782 10.4664817 10.0968076 10.6508477 10.1305433 11.6657527 3.2909699 7.9399083 15.1343820 9.4150781 9.7152587 11.3077772 12.5226842 5.5163903 6.5785448 9.3765585 10.8264730 NA 10.8945953 4.6464507 7.1013517 4.8182166 10.5706477 11.6768313 10.0707848 11.5526491 12.8581421 8.8246422 11.3074495 10.8480000 10.9218249 11.0624584 5.7192053 12.1769344 10.8585895 -1.7963603 10.4894861 9.3302106 2.5326411 5.7504002 10.1868560 10.3535706 10.7132811 10.2819905 5.8545568 7.7959630 12.0832808 10.4912185 10.8170654 8.7647940 1.2418000 1.1864000 0.2287000 0.2101100 -0.4098100 0.4778700 -0.2227300 -0.2227300 1.8379000 -0.1451500 0.7836900 -0.4233100 -0.4233100 0.0759910 -0.4385400 -0.4385400 -0.0051227 -0.0165670 -0.0070576 0.6877500 0.0199230 1.0426000 1.0426000 1.0426000 0.0216030 0.0216030 0.0216030 0.4337800 -0.4260400 -0.4260400 -0.0019399 0.2287000 0.0523830 -0.4098100 0.4340200 0.4340200 -0.2227300 -0.2227300 -0.2227300 0.0441480 0.0087528 -0.6401000 -0.4023000 -0.4023000 0.0482620 0.0482620 -0.4233100 -0.4233100 0.0759910 -0.4385400 -0.4385400 -0.4385400 -0.0051227 -0.0034627 -0.0034627 0.0000000 -0.4298100 -0.4288900 0.0199230 -0.4109100 -0.4264800 1.0426000 0.3124100 0.0216030 0.0216030 0.4337800 -0.4383200 -0.4079300 -0.3985300 -0.423 -0.423 0.000 -0.439 0.000 0.000 0.000 0.669 0.000 0.000 -0.411 -0.426 0.616 0.312 0.312 0.000 0.000 0.793 1.219 0.434 0.434 -0.438 -0.408 0.000 0.000 0.210 0.210 0.000 -0.410 0.434 0.434 -0.223 -0.223 0.000 0.000 -0.635 0.762 -0.402 0.000 0.000 0.000 -0.423 -0.423 0.000 -0.439 0.000 0.000 0.000 0.669 0.000 0.000 -0.411 -0.426 0.616 0.312 0.312 0.000 0.000 0.793 1.219 0.434 0.434 -0.438 -0.408 0.000 0.000 0.210 0.210 0.000 -0.410 0.434 0.434 -0.223 -0.223 0.000 0.000 -0.635 0.762 -0.402 0.000 0.000 0.000 8.0645930 NA 4.5785463 9.7137757 11.8330904 6.4517189 11.4016441 8.9103648 9.3326473 -0.2115649 11.8277304 11.4843392 4.9583926 4.5785463 3.2478971 8.1518735 5.9449732 11.9445516 11.1857867 11.3968774 8.7484706 -0.2115649 8.0552553 9.2949414 6.5027141 4.9583926 7.6297712 NA 10.4487616 6.3327885 6.4935257 8.0876766 4.1103967 10.1351005 10.9019937 4.0861468 8.4335266 NA 7.9074099 11.6097111 8.5665458 6.5072872 -1.7963603 5.5958229 8.8518636 -1.7963603 3.1577067 NA 5.5163903 5.6052395 3.2478971 9.6171341 0.7884351 5.3224474 10.0240840 9.8010932 4.6128950 8.7504005 14.4036001 8.5243066 6.0427100 4.4702896 11.7282926 9.0068301 NA 1.2035144 0.7884351 13.364008 6.561059 8.262850 13.602283 9.856454 10.785883 13.015232 12.931852 8.650589 11.043694 13.341858 8.903079 9.376558 8.640217 -1.796360 7.827388 12.741756 11.3540467 11.3655826 7.7523278 14.1358346 8.4538044 5.7504002 8.6649855 9.7348876 10.3826501 7.5936750 7.6065177 10.5831552 7.0108615 2.7270709 10.6923504 8.9633944 7.6133423 11.2408814 10.3269808 10.5129825 8.5388962 9.2628505 11.6505893 6.0427100 10.7558534 10.0968076 10.0669180 9.2020964 11.4166103 9.6396970 9.8319516 10.7542528 9.5333025 -0.7966109 9.2041258 6.9449732 10.8264730 5.1342415 10.8945953 8.5422426 10.4238844 10.5706477 7.7506896 12.4094520 9.7265779 9.6716210 12.9647976 9.9483399 -0.7966109 -1.7963603 10.1423505 10.1671247 10.1850734 TCGA-A8-A09T 68 0 NA 579 breast stage x t1c n0 mx female 2009 NA yes infiltrating lobular carcinoma NA NA NA 1 1 1 NA NA NA 4 1 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 3.467973e-08 18.75 18.75 6.25 31.25 25 10.5888030 10.0203161 11.2935982 9.2017233 8.5077697 8.5954160 9.7535636 9.4505628 8.9220280 8.6613299 10.3833714 10.4342610 3.1123332 12.6136273 3.3533374 9.6641287 5.1123332 8.1842828 9.3602605 13.0208620 5.0104531 12.8292303 7.4602560 9.4620906 10.8070866 5.6529023 NA 11.8144426 10.7988334 1.2378696 7.5046506 7.2676116 NA 3.3533374 9.2094073 10.2740374 10.5101048 7.1286347 9.6669218 10.9966423 9.9849379 11.3662878 13.8606783 7.8914970 9.6500808 11.5976134 11.2908846 3.1123332 2.4602445 8.9102892 11.8430346 NA 10.0027354 3.1123332 5.5836394 5.2676107 10.6222879 11.5435456 10.7423518 12.0470960 12.9301887 7.4210853 11.2194311 10.9608022 11.0164886 10.5522582 4.0452158 12.2831684 11.1230518 NA 10.2639261 9.4243908 NA 5.6529023 10.9161705 10.4186018 9.8538000 10.3463883 -0.3470317 8.5567831 12.3617697 12.2437223 9.5865919 9.2132343 0.0171240 0.0171240 0.0186630 0.0035370 0.0000000 0.0111210 -0.3339900 -0.3433600 -1.0488000 -1.0488000 0.9700100 0.0349590 0.0239090 -0.3034100 -0.3034100 -0.3034100 0.0484040 0.0157270 0.0289030 0.0189430 0.0207630 0.0404680 0.0404680 0.0404680 0.0311550 0.0311550 0.0311550 0.0620800 0.0363700 0.0171240 -0.2957900 0.0111210 0.0315770 -0.0015243 -1.2929000 0.0174040 -0.3339900 -0.3339900 -0.3269300 -0.0066432 -0.0055375 -1.0805000 -0.3021600 -0.3021600 -0.3021600 -0.3021600 -0.2921300 -0.2639600 -0.3034100 -0.3034100 -0.2963800 -0.2963800 -0.7457700 0.0157270 0.0157270 -0.0047079 0.0189430 0.0189430 0.0042564 -0.7177400 0.0404680 0.0404680 0.0221640 0.0146090 0.0311550 0.0512450 -0.0063668 -0.7008200 -0.7008200 0.000 0.000 -0.303 -0.303 0.000 0.000 0.000 0.000 0.000 1.261 -0.718 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.701 -0.298 -0.298 0.000 0.000 0.000 0.000 0.000 0.000 -0.334 -0.334 0.000 0.000 -1.049 -0.079 -0.302 -0.302 0.000 0.000 0.000 0.000 -0.303 -0.303 0.000 0.000 0.000 0.000 0.000 1.261 -0.718 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.701 -0.298 -0.298 0.000 0.000 0.000 0.000 0.000 0.000 -0.334 -0.334 0.000 0.000 -1.049 -0.079 -0.302 -0.302 0.000 0.000 8.8451943 NA 2.9748230 10.2274949 11.5620444 6.4345231 11.0580428 6.6523373 8.6240713 NA 12.2911110 10.2480749 1.6529224 0.6528765 2.9748230 8.5416445 2.2378696 9.7847583 11.0849212 10.6186856 9.0301117 6.8328103 7.8278273 10.0344442 3.9008282 2.4602445 1.6529224 NA 10.9008289 7.9882916 7.2378639 7.4473172 6.8913062 10.1553652 9.8127727 0.6528765 8.5865921 NA 6.7614262 11.7132595 7.6012686 6.7297173 0.6528765 5.3533409 7.6752690 6.3111125 -0.3470317 NA NA 4.4332132 2.9748230 10.6049145 1.2378696 5.4857907 10.0749662 9.9860566 0.6528765 7.6697100 11.4057001 6.7924532 1.9748230 1.9748230 11.6738813 1.9748230 NA NA 1.2378696 12.899373 4.862357 8.610003 12.613627 10.168601 10.549234 13.020862 12.294953 8.864790 10.973138 12.739038 8.737710 8.910289 8.180378 NA 7.332381 11.146757 10.623726 11.924364 6.434261 13.834198 8.871997 3.652899 9.215144 8.900615 9.738931 6.832810 2.237870 10.383371 6.267611 4.353344 10.942344 6.407790 5.128636 10.775729 9.835296 10.572510 8.935990 8.647255 11.047900 1.974823 11.874156 10.510105 10.576229 9.407789 11.188663 9.595416 10.761426 9.879314 9.032280 NA 8.740921 7.010453 11.843035 2.822832 10.002735 7.641586 9.867221 10.622288 6.010453 14.239682 10.579939 10.243488 12.656946 10.820319 1.237870 NA 10.283168 10.729049 8.986057 TCGA-A8-A09V 51 0 NA 457 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating lobular carcinoma NA NA NA 1 1 3 NA NA NA 4 4 NA NA NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.040392e-07 21.4285714285714 14.2857142857143 7.14285714285714 50 7.14285714285714 11.1811328 10.3184033 12.2860454 10.3669712 8.1030354 9.2825464 10.9492278 9.7033051 9.4865324 9.7574709 7.8736533 10.8270307 5.8514967 12.6373460 5.1596171 8.6301058 8.0987006 8.6947148 10.3964058 13.4785961 5.9890005 13.6528277 6.4364584 9.5295953 10.9860696 5.0076171 -1.8624965 10.4107407 9.1230930 3.5295711 8.6657051 7.0650294 -0.8627588 5.0198931 10.3539970 10.5268824 10.9762579 13.2930180 10.7822339 12.0990625 12.0801321 12.7119037 14.7340669 9.3239658 9.6613030 12.2049375 12.0249477 5.3564185 2.3851825 9.4804368 12.4783529 0.4592218 11.0874424 3.6918356 5.6129835 4.6608146 9.9546344 12.5535868 10.6754400 13.1520562 13.4661363 8.4341674 11.3495954 11.4742066 12.1673147 11.9313623 5.7883020 12.8051388 11.9485254 -0.8627588 10.2260393 9.0950786 4.4783441 4.7222146 10.8357387 11.1582310 10.6403314 10.5632537 2.5966728 7.4226535 12.9909992 12.1064577 10.0369856 10.0676188 1.26050000 1.26050000 0.00055459 0.00041593 -0.00055444 -0.00360110 -0.00691950 -0.00691950 0.00000000 0.00000000 0.00000000 0.00416320 0.00416320 0.00249690 0.00249690 0.00249690 -0.00387790 -0.00387790 0.00583090 0.00013863 -0.00110870 -0.01147300 -0.01147300 -0.01147300 -0.01986300 -0.01986300 -0.01986300 0.00541390 -0.01146700 -0.00906880 -0.00207840 -0.73530000 -0.00055444 -0.00055444 -0.00360110 -0.00360110 -0.00691950 -0.00691950 -0.00691950 0.00110930 0.00110930 0.00194180 0.00485790 0.00485790 0.00485790 -0.00325950 0.00416320 0.00777830 0.00638710 0.00249690 0.00249690 0.00249690 -0.00387790 -0.00387790 -0.00387790 -0.03272300 0.00013863 0.00013863 -0.00110870 -0.73512000 -0.01147300 -0.01147300 0.00736090 -0.01986300 -0.01986300 0.00541390 0.00360760 -0.00249380 -0.00249380 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.670 -0.065 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.670 -0.065 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.0972531 -1.8624965 5.8307370 10.3405991 11.0299836 7.3605284 11.3681722 8.1767735 8.1857377 1.1372412 10.7092407 10.2941526 2.8376809 4.3660704 5.3171593 9.3146707 3.1372576 9.7137355 11.4324460 11.3016866 9.3034141 0.1372412 8.5833006 9.8933904 5.2140665 3.6608146 0.1372412 NA 10.6278513 7.7847094 7.1001472 7.8549276 6.2613728 10.6057071 11.4870852 5.3564185 8.1073568 NA 8.7165671 12.6686325 10.4970006 6.2920694 -0.8627588 2.3851825 8.2857277 5.0320700 4.0198976 1.4591693 2.4591693 6.3384440 3.1372576 9.4980983 -0.2777089 6.6490032 10.5311777 9.6139973 5.6048571 9.9361279 11.5301051 7.4591791 2.5295711 2.3071662 12.0552757 3.7811079 -1.8624965 3.8376910 0.4592218 12.518895 3.596685 8.345486 12.637346 10.492877 10.437890 13.478596 14.027183 9.358234 11.401400 13.215444 9.366671 9.480437 9.297122 2.995231 8.203340 12.554378 11.1037565 11.5216301 8.6220738 13.2619330 9.1999719 3.3071808 8.9004635 9.1273550 10.9402581 6.1925335 7.2844558 7.8736533 6.8237519 5.8921384 11.7693375 8.1130988 6.6521624 12.4575580 10.2847740 10.5043928 7.1344304 8.0501403 14.2902092 6.2194009 12.2054432 10.9762579 10.4327330 9.7203339 12.1759986 9.0724162 10.3627598 10.8285584 9.7175097 -0.2777089 9.2225377 6.9606183 12.4783529 6.1202441 11.0874424 8.3816148 10.6876540 9.9546344 8.0665984 13.7488811 9.7860580 10.2411945 12.8211778 10.5564213 -0.8627588 1.4591693 11.0045298 11.0330157 10.9282104 TCGA-A8-A09W 70 0 NA 30 breast stage iiib t2 n3 m0 female 2007 NA NA infiltrating lobular carcinoma NA NA NA 1 2 2 NA 7 2 2 2 NA NA NA NA 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 7 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.664627e-06 5.201959e-07 15.625 15.625 3.125 34.375 31.25 10.633383 9.804154 10.883153 9.707612 9.772685 9.851416 8.017625 8.281437 8.312216 7.229978 10.037333 10.416376 1.331132 12.839332 2.916094 9.408830 4.446600 8.092676 9.686475 12.814184 2.653060 12.765405 5.591652 9.813596 11.026063 6.729156 2.553508 11.472593 10.789531 2.205580 7.477481 6.790556 1.746141 5.501051 9.496031 10.364089 9.849450 9.839580 9.816954 10.570325 NA 10.276081 13.659893 8.652436 9.548678 11.484888 11.187031 4.031563 3.390021 8.948286 10.784738 1.331132 10.984865 6.534065 5.974981 4.676899 8.927314 11.859579 8.955615 11.286048 12.878822 7.371871 10.220882 9.536510 11.280708 10.327833 4.103716 11.212493 7.833625 6.520949 9.614985 10.162959 NA 6.094891 11.757214 10.184434 10.542202 10.913894 2.916094 9.909812 11.721114 11.158732 9.275593 9.045370 0.6562700 0.6899900 0.1451800 -0.0073339 0.0000000 0.0034687 -0.0310860 -0.7429900 -0.0103700 -0.0103700 1.4328000 0.0025014 0.0645110 -0.0306770 0.1670000 0.1670000 0.0052749 0.0076392 0.0026357 0.6606900 -0.7291400 -0.0681270 -0.0681270 1.8024000 -0.0033243 -0.0033243 -0.0124380 0.0144700 -0.7385400 -0.0806740 -0.0247980 0.0087528 0.0151680 -0.0436020 0.0034687 0.0034687 -0.0310860 -0.7429900 -0.0242510 0.7368200 -0.7282600 0.7077600 -0.7366100 -0.7366100 0.0043021 0.7239500 0.0645110 1.3533000 -0.0306770 0.6257000 -0.7508000 -0.0305400 -0.7290600 0.0076392 0.0076392 -0.7295800 -0.0549600 -0.0549600 0.0153080 -0.7271200 -0.0681270 -0.0681270 -0.0417020 -0.0404800 -0.0033243 -0.7465500 0.0265140 -0.7337200 -0.7337200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.729 -0.600 -0.725 0.000 0.000 0.718 -0.692 0.000 0.000 0.000 0.690 0.000 0.000 0.000 -0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.727 0.000 0.701 -0.737 0.000 -0.311 0.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.729 -0.600 -0.725 0.000 0.000 0.718 -0.692 0.000 0.000 0.000 0.690 0.000 0.000 0.000 -0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.727 0.000 0.701 -0.737 0.000 -0.311 0.265 7.7348464 -0.2537732 4.9359877 9.4968690 12.9339006 5.0532243 10.1911768 9.1935345 7.5567336 NA 11.4679020 11.6243777 3.6530485 NA 0.3311319 7.7823358 4.1037158 9.4664063 12.3782484 11.1081058 10.2395171 -0.2537732 7.0082572 9.9335141 7.0635741 4.6288028 -0.2537732 NA 11.3228825 4.5010506 8.6165268 8.1190272 5.1891050 8.9210876 9.7960106 2.8336188 7.4706760 NA 6.8389190 12.0762385 5.9940886 7.7119464 NA 0.3311319 7.8599043 6.1124833 4.3608699 NA 4.8754459 3.0680860 2.7461623 11.1996898 NA 7.3122159 10.1309457 9.8799463 4.3311248 10.0082567 12.5955671 8.4825640 1.0681205 3.3900210 11.2198677 2.2055802 NA 0.7461408 2.0680860 9.675420 7.129866 8.927314 12.839332 10.060745 11.360182 12.814184 9.404374 8.965331 10.892731 12.719770 9.506050 8.948286 7.974981 NA 8.800088 11.085177 11.2334996 12.1889759 5.9060343 13.9653263 8.6827998 5.2539552 8.9022452 9.1113908 10.3801334 6.0129485 6.8805888 10.0373327 6.6709748 2.6530600 10.6597994 3.8754459 6.9423949 11.8075332 10.6257452 10.5830013 8.8068579 9.0937833 12.4098313 4.7905583 9.6010459 9.8494498 10.5454436 10.3571868 11.2043122 9.1619038 10.5715183 11.3043435 8.8082080 NA 8.7009834 7.5873177 10.7847381 3.9160849 10.9848652 7.4150471 10.2281329 8.9273143 7.7061638 13.7116306 9.9242043 10.8818713 12.1699345 9.6761600 -0.2537732 NA 10.8392494 10.5498895 9.8122511 TCGA-A8-A09X 62 1 426 NA breast stage iiic t2 n3a m0 female 2009 NA NA infiltrating lobular carcinoma NA NA NA 3 2 3 NA 7 1 2 6 5 2 NA NA 0 0 0 7 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.24847e-06 3.81477e-07 27.6595744680851 38.2978723404255 2.12765957446809 17.0212765957447 14.8936170212766 9.822926 9.987272 11.364607 8.638921 8.276351 9.502316 9.033591 9.296435 11.584538 8.176677 10.197171 10.488665 2.186976 12.677264 6.825561 10.125738 7.475722 8.333008 8.538100 12.149462 1.534908 11.560221 5.441776 9.487517 11.162418 7.124134 -1.272297 12.617793 11.478236 2.727528 8.304958 6.846469 NA 5.946698 9.889920 11.071270 9.168398 10.256471 9.863238 11.759575 4.681725 7.585510 15.181394 8.075084 9.243229 11.704809 10.367774 4.049457 1.534908 8.735957 11.760263 NA 10.180285 5.399954 7.389307 6.145382 10.092758 12.071686 10.615511 10.647882 12.618553 6.186960 10.369129 9.397061 10.829833 10.742944 5.012931 11.099850 6.867080 NA 10.537297 9.661957 1.727528 6.489080 10.965635 9.874097 9.930265 9.638921 3.814991 10.066265 12.088102 11.101481 9.818303 9.087279 0.0086135 -0.1069900 0.2174500 -0.0320410 -0.1146200 0.2285400 -0.0176660 -0.0346810 0.2111500 0.2111500 0.2111500 0.2179100 0.4651900 -0.0241140 -0.0241140 -0.0241140 0.5954800 0.5954800 -0.1652000 0.2189600 -0.0087365 0.2220600 -0.2931900 0.2384500 -0.0468540 -0.0468540 -0.0468540 -0.0077482 0.0075000 -0.2791800 -0.0184900 -0.3148200 -0.1131200 -0.1154300 0.3361000 0.2521500 -0.0176660 -0.0346810 0.4875100 0.2172900 0.2162200 0.2111500 0.2180600 0.2180600 0.2180600 0.2180600 -0.0302670 -0.0165250 -0.0241140 -0.0241140 -0.0241140 -0.0241140 0.5954800 0.5954800 -0.4080400 -0.1652000 0.2189600 0.2189600 0.0000000 -0.3048700 -0.2946100 -0.2931900 -0.3347300 -0.0468540 -0.0468540 -0.0195890 0.2117700 0.1190200 0.1190200 0.465 0.465 0.000 0.000 0.595 0.595 -0.118 0.219 0.000 0.249 -0.056 -0.073 0.222 -0.303 -0.303 0.000 0.000 -0.278 0.170 0.000 0.000 0.212 0.119 0.000 0.000 0.000 0.000 -0.115 -0.115 0.252 0.252 0.000 0.000 0.216 0.216 0.211 0.211 0.218 0.218 0.000 0.000 0.465 0.465 0.000 0.000 0.595 0.595 -0.118 0.219 0.000 0.249 -0.056 -0.073 0.222 -0.303 -0.303 0.000 0.000 -0.278 0.170 0.000 0.000 0.212 0.119 0.000 0.000 0.000 0.000 -0.115 -0.115 0.252 0.252 0.000 0.000 0.216 0.216 0.211 0.211 0.218 0.218 0.000 0.000 7.098216 0.312549 4.994317 10.001907 12.056204 5.919426 11.000742 9.645841 8.510314 0.312549 13.001324 11.589184 4.856811 NA 2.427982 7.182856 3.856816 11.020426 11.912249 10.307316 9.624618 0.312549 8.591715 9.974269 7.867080 8.867080 NA NA 11.228620 3.251098 7.349580 9.080676 8.549303 9.205378 10.061802 4.975456 8.503962 NA 7.591715 13.287921 7.289771 8.062919 NA 5.312491 7.867080 NA 3.312491 8.457150 7.378580 5.013485 4.219385 12.607495 NA 7.017548 10.461392 10.698713 6.128409 10.417963 12.935992 9.760263 7.475722 4.427968 9.759574 2.312491 NA 0.312549 1.312491 12.129639 7.071825 8.836053 12.677264 10.333934 11.417090 12.149462 8.647882 9.137980 10.875052 12.777462 11.017548 8.735957 6.211345 3.814991 7.790924 10.195644 11.293821 13.133402 7.566733 13.909805 8.672973 7.374987 9.503962 8.329299 10.796562 7.713371 8.166321 10.197171 7.304957 1.312491 11.474883 2.049457 8.129454 11.676079 11.113930 10.948814 8.816317 8.443491 10.353694 8.371385 10.239469 9.168398 10.764733 10.118235 11.650113 10.097126 9.100394 10.895574 8.830817 NA 10.318336 6.634419 11.760263 7.970703 10.180285 7.941848 10.766791 10.092758 7.239282 14.292631 10.972784 10.905882 12.220759 10.861313 4.085085 -1.272297 10.403045 10.739106 9.385740 TCGA-A8-A09Z 83 0 NA 0 breast stage iib t3 n0 m0 female 2008 NA NA infiltrating lobular carcinoma NA NA NA 3 2 3 NA 1 2 1 2 5 1 NA NA 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 6 1 0 0 0 0 0 4 0 0 0 0 6 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 4 0 1 0 0 0 0 0 0 0 1 0 0 0 0 6 0 4 0 0 6 1 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 1 0 0 0 1 6 0 0 0 0 7 0 0 0 0 0 0 1 4 0 0 0 0 6 0 0 0 6 4 0 0 6 0 4 1 0 0 4 0 5 0 0 0 4 0 0 0 0 0 2.718891e-05 9.328847e-06 21.8283582089552 4.01119402985075 1.02611940298507 40.7649253731343 32.3694029850746 9.4053268 10.2821409 12.1610015 10.0966258 8.6181417 8.9471284 11.5722113 9.2329320 10.6000110 11.9829305 10.1784347 9.8842305 -1.4864082 13.4176131 2.9058515 9.7126018 7.5769378 7.5469662 12.5767696 11.9560978 0.5135918 14.3946809 -1.4864082 9.8399388 9.7919924 7.1681787 0.5135918 10.8558427 9.6010060 1.5135413 9.0380847 7.5135429 NA 4.6220694 9.6434700 9.4807694 9.0757856 11.6145338 10.5181146 10.8853197 -0.4864082 10.5317433 16.0711189 8.0118338 10.8210285 11.1298622 10.8531147 4.3715240 6.4083603 9.4648277 9.0233180 NA 9.7638414 5.0985038 7.1859686 5.0371054 10.3047059 10.9031744 9.1171693 10.7214725 12.4850866 6.0833985 9.7211676 8.4244703 11.1576246 11.6056395 5.3337207 11.1947815 12.1844206 -0.4864082 10.7644336 8.3652923 1.4862510 5.3337207 11.0331793 10.1659399 10.6903395 9.9356078 -1.4864082 1.0984869 12.5145113 11.2435885 9.0410201 8.3621661 0.77220000 0.79537000 0.02361800 -0.00230390 0.00741260 -0.00202690 -0.00811110 -0.00811110 0.00000000 0.00000000 0.00000000 0.02530200 0.02239200 0.00827700 -0.00022573 -0.00022573 -0.01293800 -0.01293800 -0.00728260 0.00894370 0.03081300 0.00922230 0.00922230 0.00922230 -0.00091868 -0.00091868 -0.03389900 0.03614100 0.01228900 0.01228900 -0.01087100 -0.84472000 0.00741260 -0.02173300 -0.00202690 0.76991000 -0.00811110 -0.00811110 -0.00811110 0.00019015 0.00019015 0.00000000 0.01429700 0.01429700 0.01429700 0.02081500 0.02239200 0.02239200 0.01284700 -0.00022573 -0.00022573 -0.00022573 -0.01293800 -0.01293800 -0.82738000 -0.00728260 0.00894370 0.00894370 0.06785800 -0.82372000 0.00922230 0.00922230 -0.83370000 -0.00091868 -0.03389900 0.03614100 0.00930840 0.03317900 0.05884800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.824 0.000 0.000 -0.834 -0.834 0.000 0.000 0.000 0.795 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.824 0.000 0.000 -0.834 -0.834 0.000 0.000 0.000 0.795 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9250541 NA 3.1573995 9.3598170 10.9332399 7.5712915 11.1150817 8.1902054 9.1639397 -1.4864082 11.6214140 12.4988994 5.3464322 3.4204285 2.4204285 7.7254310 3.6428286 13.2950564 11.5819855 10.6850327 9.3938919 -1.4864082 7.0410195 11.0277639 7.4294226 -0.4864082 6.2550097 NA 10.4230612 -0.4864082 7.1788789 8.1245680 6.2617358 10.8450366 10.3392969 2.4204285 8.5400664 NA 7.7302887 12.6178961 8.7931536 6.2414627 NA NA 9.0757856 -0.4864082 2.9729683 NA 6.0681312 3.9729775 2.0985206 10.5983514 -0.4864082 7.3112043 10.8497706 8.6784501 5.2817279 9.8365978 14.0563331 8.2883300 6.6376639 4.2139849 9.8511650 1.6834719 NA 0.5135918 2.9058515 8.1118561 3.0985038 8.1592013 13.4176131 10.7414597 10.4215603 11.9560978 12.7435635 9.4597183 10.8138155 13.3765678 11.1567228 9.4648277 9.1555947 -0.4864082 7.6530944 11.0695701 10.4516524 12.0299818 7.9313953 13.1302062 10.6033245 6.3014450 7.7519477 7.7471625 9.4535703 6.9439951 8.5331339 10.1784347 7.4324066 NA 11.6792352 0.5135918 8.2844711 8.7217773 9.7768122 10.9716933 6.7662082 8.4204336 11.8944099 4.9058611 9.7457182 9.0757856 10.2944929 9.9165550 10.6658279 10.6984184 10.5258184 10.9218728 9.7537381 -1.4864082 9.5886878 6.1717553 9.0233180 3.3715310 9.7638414 4.5796327 11.3089739 10.3047059 8.8253710 13.4489844 10.4717332 11.2761327 13.2116508 9.8902111 -0.4864082 NA 9.9719497 10.3221050 9.6815882 TCGA-A8-A0A1 84 0 NA 365 breast stage iia t2 n0 m0 female 2009 NA NA infiltrating lobular carcinoma NA NA NA 1 2 1 NA NA NA 4 4 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 40.7407407407407 7.40740740740741 0 37.037037037037 14.8148148148148 10.6821802 10.4466515 11.9389197 10.1656537 8.0691774 9.7234587 10.5836832 9.3500782 9.7985726 8.4487259 10.5622884 10.3781033 1.5907218 12.5676669 3.7062211 9.8544053 5.5603726 8.2201016 10.0071906 13.0233737 1.0057593 13.9926910 5.7871425 9.7193922 10.2842319 4.6782072 -0.9942407 11.1456119 9.2772453 2.0057952 7.8512724 8.2608109 NA 4.2911836 9.9894886 10.3004031 10.4921146 11.3660808 10.3004031 10.9175488 1.3276874 11.0674910 14.8054434 8.5698176 9.6387776 11.7592081 11.4037243 4.2537095 3.8637601 9.3840772 11.9672321 NA 11.1825788 5.7200267 7.1656537 5.6782072 10.3422889 11.8575314 10.6360495 12.4393678 12.7969452 7.8637632 10.8327280 10.3864220 11.1694321 11.5036342 5.4320474 11.9391042 9.8267590 NA 10.3338963 8.9141749 2.3000358 5.7871425 10.5366764 10.1968416 9.7260267 9.9636099 1.5907218 9.6360494 13.1491656 10.9257629 10.0121084 9.4445741 0.84179000 0.83711000 -0.00539690 -0.01243800 0.00180300 0.24156000 0.00527490 -0.00249380 -0.00498440 -0.00498440 -0.00498440 0.00152550 0.00152550 0.21622000 0.20916000 0.20916000 0.16205000 0.17091000 -0.00443120 0.00000000 0.00722500 -0.00830050 -0.00830050 -0.00830050 -0.01656700 -0.01656700 -0.02615500 0.25683000 0.00444110 -0.64499000 -0.00222390 0.00194180 0.00180300 0.00055459 0.23473000 0.23303000 0.00527490 -0.00249380 -0.00249380 0.24047000 -0.64523000 -0.00498440 -0.00055444 -0.00055444 -0.00055444 -0.00761010 0.00152550 0.00819590 0.21622000 0.20916000 -0.63840000 -0.65573000 0.16205000 0.17091000 0.19131000 -0.00443120 0.00000000 0.00000000 0.00569190 -0.64443000 -0.00830050 -0.00830050 -0.00069303 -0.01656700 -0.02615500 0.24031000 -0.00622860 -0.02384000 -0.02384000 0.000 0.000 0.209 0.209 0.162 0.162 0.000 0.000 0.000 0.247 -0.644 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.836 0.240 0.240 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.235 0.235 0.000 0.000 0.240 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.209 0.209 0.162 0.162 0.000 0.000 0.000 0.247 -0.644 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.836 0.240 0.240 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.235 0.235 0.000 0.000 0.240 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 8.2273695 NA 5.7062211 10.5120900 10.9762478 6.8128152 11.6911882 9.7545455 8.5784067 0.5907218 11.5160520 11.4841981 3.7606681 5.6496385 2.5907457 8.1681737 4.7337014 11.3581017 11.7592081 10.9438917 9.1427734 2.9126690 8.0336884 10.2346011 7.0225909 7.9096639 2.4652170 NA 11.4923660 6.6639935 6.6496385 8.4652142 4.9830620 10.4429102 10.8195635 5.7606707 8.5982394 0.5907218 8.1195243 12.6527910 9.3411728 6.7805699 NA 1.0057593 8.4109236 2.3277161 4.3277089 NA 6.1350649 5.9968497 2.3277161 9.8123320 NA 6.7871425 10.1548943 9.9357805 5.2537095 9.6550385 13.6804712 9.5478469 6.2631697 3.8637601 11.5517121 2.5907457 NA NA 0.5907218 13.449827 4.678207 8.050176 12.567667 10.523944 10.742184 13.023374 12.453382 9.365532 11.036105 12.999782 9.107758 9.384077 9.166914 1.590722 7.477458 11.178210 10.9873496 11.8117277 7.8163539 13.4583434 9.1103810 6.8575319 8.5352128 9.1869345 10.1705007 7.8099134 8.2631701 10.5622884 6.2346010 2.0057952 11.2640539 5.5603726 7.3150771 11.7150816 10.6292066 10.4911085 7.2631706 8.1427734 13.7780454 6.2537095 12.1256783 10.4921146 10.5893353 9.9534193 11.6186508 9.7421843 10.1149600 10.8622079 8.7354030 NA 9.2781788 9.2961814 11.9672321 3.0057772 11.1825788 7.1350649 10.4135812 10.3422889 7.1504409 13.0897602 10.1337767 10.1498033 12.8287514 10.1018386 NA 0.5907218 10.6446707 10.8711290 10.0371389 TCGA-A8-A0A2 66 0 NA 579 breast stage iia t2 n0 m0 female 2009 NA NA infiltrating lobular carcinoma NA NA NA 1 1 1 NA NA NA 4 4 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 3.467973e-07 25 21.4285714285714 0 32.1428571428571 21.4285714285714 10.7032604 10.3010982 12.2273107 9.5275808 8.5206446 8.5241170 10.6280772 9.3776264 10.0492863 12.9375821 10.6845056 10.5888252 1.2387257 12.8790161 4.3472404 8.7904231 6.9632290 8.8133082 9.1575778 13.3029523 1.2387257 14.0889748 4.8680694 9.2941532 11.3713751 6.7504672 NA 11.9003459 8.7642357 4.0966920 9.0716047 6.6395939 NA 5.1090805 10.1113896 10.8476626 9.6240378 12.2290847 10.6307637 11.3153633 2.3261634 11.7933036 15.2022656 7.6972442 9.9759620 10.0460696 11.3686417 4.7465116 2.0460719 9.0143249 11.4064465 -0.1762506 9.5066718 9.3871913 6.3101765 3.9391513 10.2523863 12.2773766 10.9404543 12.4715853 13.1450886 7.3654196 11.0298776 10.9111865 11.5755002 11.5910341 5.3261778 12.9366597 12.8902149 NA 10.2929799 9.3808219 4.7715000 5.7144489 9.7275591 9.8194443 10.4618114 10.3165318 2.6310344 9.3446233 13.0465727 11.8296526 10.1808627 9.7205141 0.4385100 0.9994500 0.0022929 0.0012481 -0.0160170 0.0833420 0.0181030 -0.0090481 0.4513900 0.4513900 0.4081300 0.0259520 0.0214630 -0.3547600 -0.3547600 -0.3547600 0.0000000 0.0000000 -0.6754500 0.3320500 0.0458490 -0.7472500 -0.7511500 0.0445740 0.0555150 0.0555150 0.0555150 0.0907200 -0.2955600 -0.3297600 -0.2679300 0.0022929 0.0143300 -0.0127130 0.0833420 0.0833420 0.0181030 -0.0090481 -0.0090481 0.3757800 -0.7680000 0.4513900 -0.3211200 -0.3211200 -0.3211200 -0.2721200 -1.2464000 0.0894160 -0.3547600 -0.3547600 -0.3547600 -0.3547600 0.0000000 0.0000000 0.0000000 -0.6733400 0.2801000 0.2801000 0.0458490 -0.7491600 -0.7483600 0.0445740 -0.2823900 0.0555150 0.0555150 -0.2941400 -0.3947500 0.0408920 -1.0972000 0.000 0.000 -0.355 -0.355 0.000 0.000 -0.673 0.332 0.000 0.000 -0.749 -0.747 0.000 -0.306 -0.306 0.000 0.000 -0.296 0.942 0.000 0.000 -0.395 0.000 -0.279 -0.279 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.408 -0.408 0.451 0.451 -0.321 -0.321 0.000 0.000 0.000 0.000 -0.355 -0.355 0.000 0.000 -0.673 0.332 0.000 0.000 -0.749 -0.747 0.000 -0.306 -0.306 0.000 0.000 -0.296 0.942 0.000 0.000 -0.395 0.000 -0.279 -0.279 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.408 -0.408 0.451 0.451 -0.321 -0.321 0.000 0.000 8.7012170 3.0460719 4.9111403 10.0959182 10.7514552 7.7829452 11.6630123 8.7467175 8.3628749 -1.7612131 12.8684698 10.8475240 2.4086304 2.4866372 4.8386291 8.1486078 4.3261778 9.9058262 11.1830607 10.7333204 9.4365458 1.4086575 7.9969378 9.5275808 6.7622771 1.0460719 -1.7612131 NA 11.1759046 5.1929122 6.6224194 8.1486078 5.5055004 10.5891429 10.8564118 5.4383860 8.0747650 NA 7.2102583 12.9259264 9.4080134 6.4675338 -0.7612131 0.2386646 8.8543445 -1.7612131 3.5241138 -1.7612131 5.1812298 6.6073954 4.0716082 9.6649795 -1.7612131 7.5310367 10.5718701 10.0143250 4.4675338 9.1410899 11.8278977 8.6785456 3.8534268 3.5606416 11.6322393 2.2387257 NA -1.7612131 -1.7612131 12.943472 4.121355 8.796179 12.879016 9.762767 10.828834 13.302952 12.788499 8.858559 10.921490 13.377906 10.869209 9.014325 8.660780 NA 8.234482 11.337734 10.98207656 11.73044258 8.36799783 13.26579394 8.87079192 6.48188821 7.72655469 8.16797304 10.14544004 7.28583866 5.00689940 10.68450555 6.82367677 4.85342684 12.34879016 3.85342684 6.44049547 10.57131076 9.85112249 10.92718358 7.76227639 8.11982873 12.74898440 7.95639126 13.43442988 9.62403782 10.67360350 9.87307201 12.44595788 8.77399006 9.30547674 10.57326734 8.91290700 8.61266728 9.53185864 7.32315116 11.40644648 7.66497982 9.50667175 7.36283630 10.40773152 10.25238633 7.55619487 13.98254696 9.74551820 10.09475109 12.67874035 10.68424692 -0.76121314 0.02105325 10.58744291 10.85319453 10.36251285 TCGA-A8-A0A4 73 0 NA 396 breast stage iia t2 n0 m0 female 2009 NA no infiltrating lobular carcinoma NA NA NA 2 2 1 NA 5 3 3 3 3 6 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 2.427581e-07 37.5 18.75 0 12.5 31.25 10.2987498 10.4527455 12.0793661 9.8524686 8.3273775 9.0945214 10.9269276 9.0430746 10.0026367 11.5130723 11.4012072 10.8069278 2.2593328 13.1991118 3.1922257 10.1127835 7.0572889 9.2209135 10.6394981 12.6000927 -1.2002495 13.4916986 7.5107072 9.6130564 11.1184434 7.8847090 -0.2000838 11.4586097 9.5664295 2.7067957 8.2997465 7.6640867 -0.2000838 5.7999007 9.9547188 9.9432839 9.0454533 11.5865786 9.6764176 11.1833349 10.4269785 11.3434158 14.9299482 9.0761414 10.6702537 11.2992482 11.3501664 5.5278210 4.1218277 9.3116532 13.2328339 NA 11.1237998 5.6453904 4.1574561 2.7998955 10.3062082 12.1547009 10.6640868 11.7293439 12.9661422 7.0478285 10.8477062 10.6866755 11.5072597 11.9499652 5.2261655 11.7322999 12.5630092 -0.2000838 10.4942585 9.1684071 4.0501011 4.5812608 10.1347325 9.9578791 10.6875020 9.9717029 8.7885852 9.4536414 12.9876393 11.7974329 10.2756340 10.1981098 0.3260800 0.0195690 0.0043021 -0.0023553 0.0033299 0.6476300 0.0022193 -0.6363300 -0.0041546 -0.0041546 -0.0041546 0.0090312 0.0105640 0.0000000 1.2427000 0.6182400 -0.0046774 0.0105640 -0.6389700 0.0000000 0.0101460 -0.0060904 -0.0060904 -0.0060904 -0.0162920 -0.0162920 -0.0162920 0.0102850 0.0143300 -0.6354700 -0.0069195 -0.6481200 0.0033299 0.0012481 0.6476300 0.6238000 0.0022193 -0.6321600 -0.6696000 0.0024969 -0.6438700 -0.0041546 0.0045800 0.0045800 0.0045800 0.0043021 0.0105640 0.0105640 0.0000000 -0.0309500 -0.6456500 -0.6456500 -0.0046774 0.0276380 0.0033299 0.0038854 0.0000000 0.0000000 0.0101460 -0.6413300 -0.6397200 -0.0060904 -0.0949880 -0.0162920 -0.0162920 0.0102850 -0.6425500 -0.6426400 -0.6502400 0.000 0.000 0.000 -0.630 0.000 0.000 -0.639 0.000 0.000 0.000 -0.641 -0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.307 0.000 0.000 -0.643 -0.650 0.000 0.000 0.000 0.000 0.000 0.000 0.624 0.624 -0.646 -0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.630 0.000 0.000 -0.639 0.000 0.000 0.000 -0.641 -0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.307 0.000 0.000 -0.643 -0.650 0.000 0.000 0.000 0.000 0.000 0.000 0.624 0.624 -0.646 -0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.0619954 6.8333240 8.1486286 11.1975752 11.1651295 8.1713940 11.5761280 9.6219934 7.8981696 0.3848235 10.6244617 10.9999225 4.4437591 4.5278210 3.7998955 8.1618444 3.7067957 10.2266895 11.7640609 10.4369783 9.5354566 5.8551824 8.1059624 10.2319204 6.9240215 5.5943156 NA -1.2002495 11.0631698 7.6855968 7.3659549 9.3487224 9.2624029 10.6389784 10.7295289 4.2593328 9.1184433 NA 8.4563257 12.9278143 8.8511097 6.5680853 NA 6.0190680 7.8305678 5.3697561 4.9084238 -1.2002495 3.5547853 5.9808045 3.2593328 9.5730399 1.7999162 9.3573644 10.8107783 9.7112925 5.1397519 9.7247132 12.3144914 7.7482680 3.2593328 2.7067957 11.0199766 -0.2000838 NA NA 1.9698228 13.716725 5.066688 8.414610 13.199112 9.821575 10.347759 12.600093 12.406537 9.595664 11.245174 12.550817 9.684834 9.311653 8.459896 1.384879 7.727679 10.583717 11.4347117 12.0309717 7.1922178 13.1383466 8.0876129 7.5647722 8.9635504 9.2500809 10.9825278 6.0666877 8.5861703 11.4012072 4.8442953 3.9698228 10.9946574 6.8278063 7.4386987 11.8444655 11.1414194 10.7800402 7.2552278 9.1986442 13.1080974 6.0760246 11.5330070 9.0454533 10.6729602 10.0899194 9.8966158 10.1889942 9.5820799 11.0504951 8.9946575 3.1922257 8.7962895 8.4686969 13.2328339 4.8873644 11.1237998 5.2261655 10.2897486 10.3062082 7.1352907 13.5859660 10.0596439 9.7599025 12.8292741 11.0713636 0.7999162 -0.2000838 9.9515514 11.0290199 10.4842110 TCGA-A8-A0A6 64 0 NA 640 breast stage iiic t2 n3a m0 female 2009 NA yes infiltrating lobular carcinoma NA NA NA 2 2 1 5 NA NA 3 4 5 3 NA NA 0 5 0 4 0 0 5 0 0 4 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 0 1 0 5 0 4 0 0 5 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 5 0 0 0 0 0 4 4 0 0 0 0 0 1 0 0 0 0 5 0 4 0 0 0 0 5 0 0 4 0 4 0 0 5 0 0 0 1 0 0 4 0 4 0 0 0 1 4 0 0 0 0 0 4 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 7.053857e-05 3.089964e-05 0.268997982515131 0.134498991257566 0 0.302622730329523 99.2938802958978 10.61007788 9.86012308 11.36471074 9.33382309 8.52200120 9.37138919 9.83681301 10.22195898 9.73961338 12.04110818 11.61326615 10.50678430 NA 13.46402327 4.84434548 8.97667982 5.49885080 8.90163654 8.20580302 13.06808029 2.25939302 13.25577922 6.49033908 9.03782641 10.42373247 4.97210443 0.08949815 12.38723527 9.42037608 3.94744174 7.40687166 7.74767070 0.08949815 5.53240424 10.04656118 11.00794979 9.61791334 11.72812136 10.51467510 11.35448814 8.61693621 10.03490307 14.28847967 9.25686489 9.64212825 11.56088038 11.37976612 5.39324114 5.48177683 9.37601705 12.28621498 0.08949815 11.37890178 5.74766936 7.88387493 5.33738641 10.93494922 11.94530099 10.56062631 11.78272835 12.90253892 8.13658310 11.09121923 10.92125333 11.33501193 10.88549879 5.23920708 12.02830365 10.83807140 0.08949815 10.03855635 9.19798355 3.17777431 6.25938360 10.01723713 10.32128043 10.05452197 10.26687870 3.89681433 10.06100281 12.57679680 12.20092094 9.79509157 8.89035914 1.122700 1.126200 0.038630 0.031000 0.074840 0.037924 -0.203860 -0.201090 0.051103 0.051103 0.034645 -0.108930 -0.103030 0.695770 3.656900 3.656900 0.039478 0.035665 -0.014916 -0.193620 0.061365 0.053948 0.492510 0.047836 0.429230 0.000000 0.446130 0.060365 -0.185840 -0.450290 -0.191990 0.038630 0.074840 -0.011749 0.037924 0.037924 -0.203860 -0.201090 -0.199870 0.032563 0.032563 0.051103 -0.190610 -0.190610 -0.190610 -0.190610 -0.103030 -0.086253 0.683100 -0.467380 -0.444050 -0.450610 0.039478 0.035665 0.060936 -0.014916 -0.446090 -0.446090 0.061365 -0.443070 -0.426580 0.047836 -0.190640 -0.011473 0.000000 0.060365 0.050961 -0.421560 -0.432030 -0.103 -0.103 0.227 -0.444 0.000 0.000 0.000 -0.446 0.000 0.000 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 -0.390 1.123 0.000 0.000 0.000 -0.432 -0.192 -0.192 0.000 0.000 0.000 0.000 0.000 0.000 -0.201 -0.201 0.000 0.000 0.000 0.000 -0.191 -0.191 0.000 0.000 -0.103 -0.103 0.227 -0.444 0.000 0.000 0.000 -0.446 0.000 0.000 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 -0.390 1.123 0.000 0.000 0.000 -0.432 -0.192 -0.192 0.000 0.000 0.000 0.000 0.000 0.000 -0.201 -0.201 0.000 0.000 0.000 0.000 -0.191 -0.191 0.000 0.000 8.58930508 4.99634807 4.67442110 10.44370858 11.12803532 6.58866667 11.14846559 9.76334235 8.48250628 NA 12.69840700 11.27015163 1.67441545 2.67441545 4.48177683 8.61497996 4.48177683 11.10452570 10.90123528 11.16660869 9.01427159 5.62861905 8.06387392 9.94198865 8.00832217 4.51572507 2.08946425 NA 11.50282266 6.37486213 6.87736144 8.05812597 6.88387493 9.95123633 10.92432521 6.04365510 8.08945896 -0.91050185 7.89681433 12.26438489 7.99634976 7.39324028 1.08943035 1.41137201 8.82416894 -0.91050185 2.78989615 0.08949815 7.91918214 4.97307855 3.61302473 10.76055796 0.08949815 9.68004633 10.43097799 10.19667626 5.76188361 10.32307886 13.61840161 9.51047204 6.31827707 4.13385118 10.90564288 2.54888046 NA -0.91050185 1.08943035 14.4434702 4.7041693 8.9598240 13.4640233 10.3206804 11.4538675 13.0680803 11.6657073 11.7635124 10.7911989 14.0218124 8.6517015 9.3760170 10.3823560 -0.9105018 7.6324907 11.4796282 10.6076206 11.5815628 5.7759592 15.9633692 8.6517015 7.7405107 8.4557813 7.9096381 10.0345665 7.9286629 6.7188164 11.6132662 7.2792837 4.3748586 10.9925879 9.3909555 5.9340706 11.1386271 10.1973301 10.9148156 7.1769221 9.5550256 11.3585859 9.0113002 11.4057237 9.6179133 10.1802333 8.7601155 11.2315663 9.7050889 13.4517455 10.2174536 8.9427687 -0.9105018 8.9737060 7.9186426 12.2862150 8.4203759 11.3789018 5.5972541 10.4979428 10.9349492 7.3794780 13.7052612 10.1676099 10.6036801 12.8031679 10.6223021 3.3373828 NA 12.3778927 10.0487367 9.5427299 TCGA-A8-A0A7 57 0 NA 30 breast stage iib t2 n1a m0 female 2009 NA NA infiltrating lobular carcinoma NA NA NA 3 2 4 NA 6 1 2 6 2 2 NA NA 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.254182e-06 6.242351e-07 10.7142857142857 79.7619047619048 0 7.14285714285714 2.38095238095238 10.4235156 9.6742624 11.6706180 9.7159438 8.5863662 9.4537174 9.2941552 10.1649287 10.5300183 12.4812210 10.5215658 10.4907985 NA 15.7651060 3.7804886 10.0910319 6.2732529 8.9446728 8.1649285 11.3611464 0.2362171 10.5959131 1.8211387 9.5068483 10.3160927 7.1629542 1.4585395 10.6345510 10.4915856 3.1747579 9.3209720 7.4456166 NA 8.0021405 9.9331310 10.1520429 9.7913918 10.0931077 9.5922487 11.5995683 1.9731337 7.8679471 14.8321397 6.8958976 9.5708094 11.0774658 10.8104417 4.4585592 3.9366003 9.1903598 11.0289538 NA 11.0188888 6.9085884 8.5951810 6.3859107 10.9050486 11.5564000 10.0186158 11.5446922 12.5527279 7.2134435 10.6266908 10.3346694 11.1067851 11.1274409 4.6053995 11.7261787 8.6610295 3.8606550 10.5017786 9.2594559 2.8998910 7.0349057 10.3930893 9.8848207 9.8890085 10.9885442 4.9179854 7.4259879 12.4533135 11.7428017 9.8248783 9.1678860 0.070817 0.070817 -0.038170 -0.038170 0.051956 -0.052126 0.055373 -0.133850 -0.132380 -0.132380 0.729050 -0.127270 -0.066386 0.111840 0.111840 0.111840 -0.061286 2.295100 0.044715 -0.066190 -0.041702 -0.127970 3.296400 0.365590 -0.011749 -0.011749 0.335450 0.325110 0.070817 0.070817 -0.023292 -0.038170 0.051956 0.051956 -0.052126 -0.052126 0.055373 0.055373 -0.141620 0.096961 0.088013 -0.132380 -0.126420 -0.126420 -0.126420 -0.126420 -0.066386 -0.114300 0.111840 0.111840 0.111840 0.111840 -0.061286 -0.118870 -0.122130 0.046842 -0.066190 -0.066190 -0.238180 -0.107750 -0.127970 -0.149780 -0.094064 -0.011749 0.335450 0.312900 -0.023977 -0.124730 -0.133550 0.000 0.000 0.112 0.112 0.000 0.000 0.000 0.000 0.000 0.136 0.028 -0.128 -0.128 0.000 0.000 0.323 0.323 0.000 0.000 0.313 0.313 0.000 -0.125 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.132 0.597 -0.126 -0.126 0.000 0.000 0.000 0.000 0.112 0.112 0.000 0.000 0.000 0.000 0.000 0.136 0.028 -0.128 -0.128 0.000 0.000 0.323 0.323 0.000 0.000 0.313 0.313 0.000 -0.125 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.132 0.597 -0.126 -0.126 0.000 0.000 8.4456171 3.4585526 4.6955930 9.7166171 11.1271877 6.3732567 10.2562175 10.2242138 9.0919145 2.8991370 12.0574060 12.2817890 4.4325586 0.2362171 3.2361711 7.9109443 4.6955930 11.6151808 11.6966195 9.9498365 8.8248783 2.1106305 7.5091820 9.8173641 9.3765674 5.8009491 4.3791219 NA 11.2269766 6.8848201 6.8848201 8.4456171 8.1003496 9.7216977 9.9308117 5.8311096 8.4935513 NA 8.1589959 12.3743287 7.4553322 6.3306803 NA 3.4585526 8.1024120 4.4840930 3.9366003 -1.3488679 9.1747629 3.6063238 6.1825831 10.8499530 0.9731337 7.9389132 10.6028500 9.8167362 6.8752026 10.9572627 14.5855830 10.6921757 7.2210563 6.2659113 9.9954970 0.6512239 -0.3488679 NA 3.4060876 12.228630 6.309413 8.417730 15.765106 10.113233 10.837625 11.361146 9.264070 9.260380 10.759726 13.398555 8.145056 9.190360 9.177700 1.236156 7.943523 11.834526 10.5349898 11.4160726 4.1430505 13.6398409 8.9446728 9.0899928 7.7649432 7.7199795 9.6543464 9.0605919 7.6053973 10.5215658 7.3129791 0.9731337 10.5211803 4.1106305 7.4770499 11.2314596 11.1000917 10.1732921 8.3022528 9.8404078 10.6427229 10.6270490 11.1960061 9.7913918 10.5041206 9.6928603 10.4177300 10.1435550 10.9904944 10.4629771 9.5414653 NA 9.5295202 7.9798762 11.0289538 10.3555370 11.0188888 7.5399443 10.3363878 10.9050486 7.6583965 13.7804841 10.6013924 11.0010352 12.1927817 10.1659151 6.9640844 -1.3488679 10.7346803 9.7226634 9.1619653 TCGA-A8-A0A9 80 0 NA 822 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma NA NA NA 1 1 1 NA NA NA 4 1 3 4 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.179111e-06 2.080784e-07 27.5 42.5 5 20 5 10.6828363 10.4829751 12.0796027 9.6699250 8.7520989 8.4464945 10.1039024 9.5527175 9.9983748 9.0221403 11.7802452 10.6902722 1.2285417 13.3097291 3.9834223 10.7045236 6.3212950 8.7153721 9.7623533 13.4703339 -0.1865574 14.0662634 3.8432503 9.9517115 11.2444746 4.1111816 -0.7715199 9.6246065 11.7332318 1.8134836 7.4549490 7.1943215 2.0359054 4.0614306 9.2299452 10.6450706 9.7078119 11.5443941 10.0590521 11.2409869 1.0359054 11.4448281 15.2640986 8.6048794 9.7383120 11.7814461 11.4618570 4.0865205 4.1592740 9.3591076 10.9117509 NA 10.9022877 4.8723954 6.0740280 5.3265697 10.1986428 12.0314571 10.8676515 12.3304306 12.9067519 7.9834246 11.0084615 10.8835801 11.2521181 11.5163936 4.8867501 12.2658265 11.4792795 0.2284801 10.5185558 9.3133454 3.6433483 5.7831266 11.0657707 10.2616158 10.3636049 9.9556065 2.9289766 7.6100799 12.7236425 11.1207002 9.8528754 9.4788353 1.28910000 1.25710000 0.00000000 0.00000000 0.51141000 0.78331000 -0.10145000 -0.10145000 0.64249000 0.64249000 0.64249000 -0.05967300 -0.05967300 0.00097064 3.65690000 3.65690000 0.25636000 2.28150000 -0.22256000 0.16595000 -0.04088800 0.03354900 0.03354900 0.03354900 0.41329000 0.41329000 0.41329000 0.78234000 -0.17942000 -0.17942000 -0.17752000 0.00000000 0.51141000 0.51141000 0.78331000 0.78331000 -0.10145000 -0.10145000 -0.10145000 0.65259000 -0.52440000 0.64249000 -0.34561000 -0.31506000 -0.31506000 -0.31506000 -0.05967300 -0.05967300 0.00097064 0.00097064 -0.85773000 -0.85773000 0.25636000 -0.56783000 -0.58351000 -0.20423000 0.16595000 0.16595000 -0.04088800 -0.55066000 0.03354900 0.03354900 0.27868000 0.41329000 0.41329000 0.78234000 -0.24849000 -0.31085000 -0.31085000 0.000 0.000 0.000 -0.858 0.256 0.000 -0.223 0.166 0.000 0.423 -0.551 0.000 0.000 0.279 0.279 0.413 0.413 -0.179 1.110 0.782 0.782 -0.248 -0.311 -0.178 -0.178 0.000 0.000 0.511 0.511 0.783 0.783 -0.101 -0.101 -0.233 -0.885 0.642 0.642 -0.315 -0.315 0.000 0.000 0.000 0.000 0.000 -0.858 0.256 0.000 -0.223 0.166 0.000 0.423 -0.551 0.000 0.000 0.279 0.279 0.413 0.413 -0.179 1.110 0.782 0.782 -0.248 -0.311 -0.178 -0.178 0.000 0.000 0.511 0.511 0.783 0.783 -0.101 -0.101 -0.233 -0.885 0.642 0.642 -0.315 -0.315 0.000 0.000 8.8265895 NA 6.2838199 10.9080170 11.0736349 7.5278140 11.4478568 8.3901728 8.8357564 -0.1865574 11.7501374 11.3748542 1.0359054 0.8135247 3.9834223 8.4740896 2.5504574 11.5525768 11.5993606 11.2170441 8.8303076 5.3053541 8.0407144 10.2253635 5.5594551 5.7042716 3.2729339 -1.7715199 10.9689502 4.9967232 6.2341621 8.5661587 6.2674553 10.8614822 11.0154192 1.3984598 9.2348629 -0.7715199 7.3833552 12.3979139 9.2708802 5.8134990 NA 7.6694060 8.1725170 -0.7715199 4.7363343 -1.7715199 5.0229537 5.4311516 1.0359054 11.0223435 -1.7715199 6.2115301 10.7040170 9.4109313 3.6879677 9.4999999 12.9313049 8.0033239 2.8723954 3.7520956 11.0511078 2.2285417 NA -0.7715199 -0.1865574 15.900810 4.970002 8.299999 13.309729 10.267113 10.826124 13.470334 12.805317 11.722415 11.290077 13.554299 11.078528 9.359108 9.854702 3.357819 7.671480 12.190167 10.958795 11.871491 6.875995 13.409999 8.954755 5.171051 8.306688 8.899193 10.484197 6.679748 8.558333 11.780245 6.256443 2.316001 10.912409 5.111182 7.713219 10.362000 9.697670 10.742511 9.103518 9.303347 13.704872 3.720388 12.818436 9.707812 10.452539 9.970846 11.728756 10.349099 10.262304 10.469328 8.600314 -1.771520 8.798127 6.176905 10.911751 1.550457 10.902288 7.415889 10.074039 10.198643 7.946213 13.528210 10.029437 9.341628 12.918917 11.354596 NA -1.771520 10.339020 10.593492 9.695123 TCGA-A8-A0AB 54 0 NA 518 breast stage iia t2 n0 m0 female 2009 NA no infiltrating lobular carcinoma NA NA NA 1 2 4 NA NA NA 4 4 3 6 NA NA 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.387189e-07 35.2941176470588 17.6470588235294 11.7647058823529 17.6470588235294 17.6470588235294 10.4772237 10.3733957 12.2806974 9.9218276 8.4493014 8.8131713 9.9495469 9.7652591 9.4535509 8.8040481 11.3214474 10.6882416 3.4017124 13.7420777 4.4192018 7.3524990 7.1760165 9.0157036 8.2596929 13.4214044 1.8515192 14.2683312 5.6215889 8.6308026 11.5095988 3.6880125 -0.9559557 7.0748276 9.3989604 4.0441580 8.6551847 7.8943467 -0.9559557 3.9268060 10.3427954 10.9429503 10.1888182 11.6894806 11.0926468 12.1959693 7.2487312 12.2154931 14.7730105 7.5730048 9.7852056 11.4442389 12.4414335 5.4450380 3.1316224 9.9544280 10.9963552 -0.9559557 10.5541823 3.3295685 3.6588741 4.4192018 9.6263019 12.3782936 10.6835007 11.8684226 13.0094933 9.1309597 11.5252025 11.1352565 11.4510293 11.5946662 5.8833642 12.3401441 12.6225916 -0.9559557 10.2389168 9.4819120 4.3800852 3.5677280 11.1294664 10.9542405 10.6335771 10.4380867 0.3661403 10.2422980 12.9382672 13.2479285 11.1289684 9.5035916 1.512000 1.510300 0.011400 0.011400 0.068309 0.000000 0.095653 0.252250 0.230090 0.230090 0.239850 -0.328320 -0.328320 -0.792440 0.130360 0.130360 0.078727 0.078727 0.106280 -0.784710 -0.314010 -0.525940 0.305520 0.338040 0.086233 0.086233 0.086233 -0.274040 -0.315170 -0.335570 -0.315290 0.011400 0.105260 0.073115 0.000000 0.000000 0.095653 0.252250 0.303780 0.049966 0.049966 0.262630 -0.368840 -0.368840 -0.368840 -0.368840 -0.328320 -0.315990 -0.797700 0.130360 -0.792600 -0.783190 0.078727 0.078727 0.078727 -0.968960 -0.784710 -1.257100 -0.310700 -0.796060 -0.521740 0.338040 0.103070 0.086233 0.086233 -0.296430 0.118140 -0.313300 -0.313300 -0.328 -0.328 -0.792 -0.792 0.000 0.000 0.000 -0.785 -0.311 0.449 -0.766 -0.522 -0.216 0.123 0.123 0.000 0.000 -0.315 1.195 -0.274 -0.274 0.118 -0.313 -0.327 -0.327 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 -0.388 0.000 0.000 0.230 0.230 -0.369 -0.369 -0.109 -0.109 -0.328 -0.328 -0.792 -0.792 0.000 0.000 0.000 -0.785 -0.311 0.449 -0.766 -0.522 -0.216 0.123 0.123 0.000 0.000 -0.315 1.195 -0.274 -0.274 0.118 -0.313 -0.327 -0.327 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 -0.388 0.000 0.000 0.230 0.230 -0.369 -0.369 -0.109 -0.109 7.9450265 NA 6.3341785 10.2897126 11.1994526 7.0114722 11.7833077 7.6218717 8.0795088 3.0441668 11.5057673 10.6062998 2.3660844 2.2920749 4.6735169 9.1048558 2.7445917 7.2190852 10.7977946 11.3979960 9.1526844 4.1316224 8.1075550 9.5294862 5.0885529 5.8385762 1.9510655 -1.9556758 9.8872959 5.4871036 5.3015474 8.6196991 4.9389773 10.4549345 11.6881289 3.1316224 9.0602717 -0.9559557 7.9480419 12.6333429 8.6309998 5.9021411 -1.9556758 2.7445917 8.9555520 NA 2.9510469 1.7445917 1.3660844 7.0929463 -0.3708999 10.7725057 -1.9556758 6.7822526 10.5816211 10.1425210 1.5036032 9.7476309 10.4329845 6.9329033 2.4364817 1.6291001 10.9122108 2.0441493 NA NA -0.3708999 13.3394378 6.1102484 8.6835007 13.7420777 10.0926468 11.2731289 13.4214044 12.5810749 9.7923529 11.4940540 13.4213366 11.1606664 9.9544280 10.0689533 0.6291001 7.4725203 12.1097444 11.5164700 11.5517069 8.9555520 14.0793873 8.9382199 3.5987463 9.9760056 10.0406334 10.4476833 4.8123442 3.0441668 11.3214474 3.7990458 3.2536112 11.5087057 9.9367027 7.2611725 11.6073562 9.8019666 10.5973093 8.5677219 7.2801741 13.6341914 2.7445917 13.5096562 10.1888182 9.2663511 10.3312951 11.6547235 9.4912432 10.5494753 10.6902686 9.1856285 -0.9559557 8.6714841 6.5400149 10.9963552 3.0885487 10.5541823 6.3479402 10.3297211 9.6263019 7.8500487 13.6635489 9.5963487 9.7467656 13.2267483 11.1840310 -0.9559557 0.2707083 11.0221553 9.2590863 10.2240691 TCGA-A8-A0AD 83 0 NA 1157 breast stage i t1c n0 m0 female 2007 NA no mixed histology (please specify) NA NA NA 1 1 3 1 NA NA 1 1 5 4 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 3.121176e-07 12 8 4 44 32 10.7170118 10.1830488 11.6930997 10.3018499 7.8376796 8.6625929 10.5750572 10.1568569 9.6587094 12.6658855 11.6929099 10.7687321 NA 13.5018914 5.9913314 9.6664658 6.4949931 8.5002105 9.4032767 12.6727373 -1.1985930 12.6753344 5.9512521 8.9027067 10.4743732 7.0303250 NA 10.5647058 9.0949776 0.8014898 8.6391337 7.6375559 -1.1985930 4.6343958 10.4849392 11.8364767 10.8404248 11.6377535 10.0140022 11.7850339 13.9785360 9.8231800 15.0163372 8.1905561 10.2634968 11.0845942 10.4381304 4.2933558 6.3013517 9.0612491 12.2210711 0.3864799 11.2670722 4.9307894 6.7787855 5.7322421 10.5019455 11.3779902 10.2812861 12.5860385 12.9643692 6.9359323 10.8969029 10.7996414 11.6709069 11.2298660 4.5563926 11.5920580 12.4281275 -0.1984274 10.2345696 9.2371760 3.3275724 6.3092999 9.8190103 9.7196238 9.8141304 9.9080688 1.6088565 4.8238716 13.0608078 12.4245871 9.8015058 9.3732584 0.00194180 0.10045000 -0.00041585 0.00055459 0.01484500 0.01140000 0.73587000 -0.79736000 0.01102200 0.01102200 0.01102200 -0.77753000 -0.77753000 -0.00163960 -0.00163960 -0.00163960 -0.00027724 -0.00027724 -0.78933000 0.00861350 0.02244400 -0.78159000 0.63865000 0.66456000 -0.02890100 -0.02890100 -0.02890100 0.00220550 0.00194180 0.00194180 -0.03844200 -0.00782500 0.01516800 0.01484500 0.01140000 0.00275690 0.00069327 -0.80109000 -0.00968060 0.00597000 0.00597000 0.01810300 0.01126100 0.01126100 0.01126100 -0.00534830 -0.77753000 -0.77753000 -0.02196500 -0.00163960 -0.00163960 -0.00163960 -0.00027724 -0.00083160 -0.00083160 -0.78083000 0.00277690 -0.00373950 0.01363200 -0.77116000 -0.78159000 -0.80459000 0.01112100 -0.02890100 -0.02890100 0.00777830 0.01000600 -0.00443120 0.02412700 -0.778 -0.778 0.000 0.000 0.000 0.000 -0.794 0.000 0.000 0.738 -0.033 -0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.125 -0.778 -0.778 0.000 0.000 0.000 0.000 -0.794 0.000 0.000 0.738 -0.033 -0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.125 8.7218586 NA 4.2933558 9.8314832 11.0005646 6.5254738 10.9184995 9.0011537 8.3618385 NA 11.8776534 11.1454355 1.3864799 4.2933558 4.2933558 8.2277704 4.1234344 9.9001960 11.2421155 10.1808842 9.2812861 -1.1985930 7.4453617 8.9448892 5.9204458 4.6841511 -1.1985930 NA 11.0606606 5.9913314 6.7615074 8.3112810 5.4308640 9.9422270 9.7752032 7.2193583 8.5174678 NA 6.8889685 12.1858849 8.0799551 6.6024064 -1.1985930 2.7083859 8.2382175 1.1234013 2.1234344 NA 3.6594908 5.0585157 1.3864799 9.7923189 NA 5.4308640 10.3176983 9.5387531 4.1234344 9.0085202 11.9720569 8.7158910 -0.1984274 3.6088565 12.2720376 2.8889672 -0.1984274 1.6088565 1.9714424 14.285369 5.445363 8.870284 13.501891 9.599289 10.525593 12.672737 13.123434 9.487131 10.859498 12.895996 8.938497 9.061249 10.223571 1.386480 7.231958 10.604022 11.138570 12.036323 7.720369 13.943492 8.907414 4.529427 8.653255 8.793028 10.170072 7.393963 7.123434 11.692910 6.653255 3.501949 12.373022 5.595921 6.649878 10.505409 9.076466 10.895254 7.624873 8.187368 12.552841 4.010959 12.128375 10.840425 10.266562 9.191675 11.855601 9.320159 10.802562 10.300853 9.671100 NA 9.117968 8.724477 12.221071 1.971442 11.267072 8.894263 10.461056 10.501946 7.495237 13.126454 10.263497 10.690629 13.016432 9.995031 NA NA 10.771612 10.693669 9.190599 TCGA-AC-A23C 62 0 NA 585 breast stage iib t2 n1 mx female 2010 NA no infiltrating ductal carcinoma 1 white NA NA NA 4 2 4 3 2 2 5 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 4 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 4 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.392901e-06 6.242351e-07 7.95454545454545 40.9090909090909 2.27272727272727 22.7272727272727 26.1363636363636 10.210843 10.599179 12.023315 10.160922 8.466535 9.893028 10.529838 10.422313 9.495080 14.634994 10.801409 11.053949 1.851839 15.249845 3.693130 9.185726 7.408970 8.740568 8.614484 13.149649 NA 13.038043 5.888914 8.946448 10.976377 8.700448 2.967298 12.457772 9.005799 2.436775 7.370150 7.770688 -1.733124 5.466536 10.562058 10.689978 9.641359 11.073412 11.138575 12.094106 6.514790 10.676784 14.733194 9.067892 9.942820 10.092219 11.540950 5.782563 4.495682 9.007487 11.572782 -1.733124 10.279138 6.505267 6.566071 5.542989 11.150079 11.959260 10.407373 11.593292 13.217737 8.406414 11.529251 12.251930 11.683528 11.294769 5.844290 12.524987 10.641630 -1.733124 10.237688 9.152559 4.150243 6.131048 8.730387 10.221059 10.059246 10.173753 3.173751 9.806021 12.752503 11.382394 9.983682 9.180500 -0.0243880 1.2576000 0.0023581 -0.0111980 0.0122370 0.0505340 3.1028000 0.1079900 0.0178240 0.0178240 0.0235660 0.4101100 -0.3690600 0.2417100 -0.2027400 -0.2027400 0.0203430 0.0319990 -0.0113350 -0.1497800 0.0026357 0.0210430 3.6569000 0.4344600 0.0447150 -0.4211200 -0.0495590 2.1290000 0.0055529 -0.0243880 -0.0040162 -0.4138800 -0.4546900 -0.0220830 -0.0131970 -0.0131970 -0.4748000 0.0056919 0.1079900 0.5056800 0.0145640 0.0178240 -0.0103700 0.0000000 0.0000000 0.0000000 -0.3690600 -0.3690600 0.2417100 0.2384500 -0.2087100 -0.1958700 0.0203430 0.0319990 0.0502500 -0.0113350 -0.1497800 -0.1497800 -0.0113040 0.0410520 -0.4300700 -0.4068300 -0.4714100 0.0447150 -0.4211200 0.0663720 -0.0263040 0.0390540 0.0390540 0.000 -0.369 0.039 -0.203 0.000 0.000 0.000 -0.150 0.000 0.000 0.000 -0.423 0.000 0.000 0.000 0.000 -0.372 0.000 1.175 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.449 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 0.039 -0.203 0.000 0.000 0.000 -0.150 0.000 0.000 0.000 -0.423 0.000 0.000 0.000 0.000 -0.372 0.000 1.175 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.449 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.4367877 5.1975981 3.9672977 9.5201193 11.9088015 6.1144836 11.4489466 9.3705503 8.1186115 0.8518390 11.5052674 11.2167750 5.0997539 1.4368015 3.7262972 8.5040725 4.4367882 11.0471973 11.8498278 10.8431108 9.6751924 5.5052685 8.2738898 9.6304499 7.2210592 9.3396652 0.8518390 NA 11.3102317 7.6309973 7.5797459 8.2512812 6.6419015 9.8000755 10.3221450 5.0612794 7.9673024 -0.1481610 7.8310120 12.4819405 8.6591800 6.1248430 0.5888046 4.1975981 9.1601641 -0.7331235 2.6591711 1.7263081 6.3057809 6.1794533 3.2210573 10.0192432 -1.7331235 8.8011654 10.6279839 10.1429958 4.4166101 9.9454627 13.2704684 8.7647144 4.4763169 3.2668615 14.1197335 0.2668765 NA 1.2668765 0.2668765 12.862213 5.149507 9.032563 15.249845 10.776885 11.682340 13.149649 12.288970 9.146086 10.942158 12.723089 7.728342 9.007487 9.682604 1.074231 8.309890 13.033599 11.0252941 11.9826101 8.1510333 13.9686006 9.0637135 6.8137568 8.8118271 8.3030364 10.6310684 6.9742218 8.0563960 10.8014087 6.6548794 4.0482187 11.1078372 4.5147914 7.1074201 10.9834678 10.5941346 11.1782546 7.2181476 9.2745908 12.1942702 8.4367877 12.2065180 9.6413587 10.2717853 9.3456807 12.1910256 9.6575689 9.3160305 10.9774538 9.3316054 6.1976001 9.3306890 7.5585171 11.5727819 8.3648946 10.2791380 7.8291049 10.5218912 11.1500787 8.1510333 13.3082223 10.2745907 10.3224840 12.3095480 10.3806048 0.2668765 3.0742143 10.8310121 10.8590861 10.3453470 TCGA-AC-A23E 50 0 NA 698 breast stage iib t2 n1 mx female 2010 NA yes infiltrating ductal carcinoma 1 white NA NA NA 2 1 5 3 4 1 5 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 7 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.040392e-07 25 12.5 6.25 43.75 12.5 10.6497433 10.3070766 11.7324342 9.9924409 8.2775324 9.0740850 9.6144487 9.9072765 9.9377266 13.6024776 9.9300611 10.7484185 1.7497059 12.6202748 3.3346684 9.5232887 7.3482599 8.4714204 10.0988302 12.9355326 0.6122109 13.3215818 2.4601921 9.1231582 10.1828111 4.8294285 -1.7098115 9.5482453 11.4907071 1.6122109 7.7700487 8.1971587 -1.7098115 4.3346612 10.0304706 10.5857502 9.4495090 12.7105575 10.6206250 11.7209821 1.9907008 11.5259833 15.4350260 8.4254518 9.2488209 10.2180462 11.6480951 4.6121991 2.3777346 9.6356735 11.6086698 0.8752296 11.4385859 7.4425529 6.1667857 5.3455490 10.7468793 11.8820243 10.5937637 12.4168114 12.8689947 8.3764046 11.0767421 10.7728998 11.1255292 11.4822528 5.3777311 12.4167307 8.8883207 -0.7098115 10.4208388 9.2902682 2.3709175 6.8410145 10.6048515 10.5250857 9.8686409 9.5417506 6.2386359 8.2386355 12.7541757 12.0159540 9.9587100 9.1858435 0.638710 0.638710 0.000000 0.055133 -0.129900 0.228130 0.286330 0.286330 0.209210 0.209210 0.225660 0.219650 0.212480 -0.178490 -0.178490 -0.178490 0.268330 0.268330 -0.110730 0.278260 -0.487820 -0.497950 -0.055339 -0.055339 0.186510 0.186510 0.186510 -0.057073 -0.114780 -0.114780 -0.115440 0.000000 -0.123390 -0.131310 0.228130 0.228130 0.286330 0.286330 0.286330 -0.128180 -0.130010 0.209210 0.248650 0.248650 0.266290 0.266290 0.212480 0.236790 -0.178490 -0.178490 -0.178490 -0.178490 0.268330 -0.518040 -0.518040 -0.113060 0.278260 0.278260 -0.501930 -0.510080 -0.506150 -0.055339 -0.059092 0.186510 0.186510 -0.057073 0.066560 -0.097058 -0.097058 0.212 0.212 -0.178 -0.178 0.268 0.268 -0.120 0.278 -0.488 0.751 -0.467 -0.437 0.000 0.000 0.000 0.187 0.187 -0.115 0.524 0.000 0.000 0.000 0.000 -0.123 -0.123 0.000 0.000 -0.123 -0.123 0.228 0.228 0.286 0.286 -0.128 -0.128 0.209 0.209 0.266 0.266 0.000 0.000 0.212 0.212 -0.178 -0.178 0.268 0.268 -0.120 0.278 -0.488 0.751 -0.467 -0.437 0.000 0.000 0.000 0.187 0.187 -0.115 0.524 0.000 0.000 0.000 0.000 -0.123 -0.123 0.000 0.000 -0.123 -0.123 0.228 0.228 0.286 0.286 -0.128 -0.128 0.209 0.209 0.266 0.266 0.000 0.000 7.4972826 6.1667857 5.8371637 10.0584526 11.1731023 6.3216522 10.8643887 9.6630571 7.8448570 2.3777346 11.9729337 11.2600847 2.2902769 1.0976108 2.9341202 8.4714204 4.5381967 10.5698789 11.3965040 10.3886293 9.4942280 1.7497059 7.6782853 9.8167675 6.1606338 2.5381905 1.9907008 NA 11.3953583 5.1729115 8.3414770 7.7228103 6.6166973 9.7755945 10.3974853 5.1357565 7.6500177 NA 8.5951900 12.9884303 6.8216503 7.6099403 1.0976108 7.0814312 7.9556040 -1.7098115 3.1482508 2.6121873 3.2902622 5.5004037 2.0976108 10.8686409 NA 7.1388912 10.4630083 9.5808630 4.4195524 10.2484585 12.1472773 9.3664158 0.8752296 3.2902622 11.5085287 4.9049802 -1.7098115 1.8752296 -0.1246917 11.981122 4.962692 8.192643 12.620275 10.290663 10.701779 12.935533 11.967327 9.285329 11.085090 13.100288 9.712859 9.635674 9.162943 -1.709812 7.197159 11.373249 11.4174566 11.8837761 6.3346630 13.6587051 8.9287040 3.8138325 8.2283776 8.3948669 10.4947232 7.0079445 6.8294272 9.9300611 6.4551760 4.2210032 11.0073020 7.7435392 7.1679821 12.0298379 10.6815118 10.8913426 8.6825856 8.1466939 12.8179285 3.8448576 10.0064231 9.4495090 10.4384270 9.5328470 11.4633207 9.4899407 10.2870948 10.7280203 9.6082461 2.9907008 9.2170683 8.0511877 11.6086698 3.6478210 11.4385859 10.1314394 10.2986969 10.7468793 6.9159773 14.3519348 10.0749030 10.4592537 13.1650095 10.2338820 0.2903064 -1.7098115 10.2653997 10.9422168 9.4831775 TCGA-AC-A23G 76 0 NA 2248 breast stage iia t1c n1 mx female 2006 NA no infiltrating lobular carcinoma 2 white NA NA NA 2 3 NA NA 3 3 4 3 3 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.774378e-07 22.2222222222222 14.8148148148148 3.7037037037037 44.4444444444444 14.8148148148148 9.9531475 9.7131966 11.5107038 9.4403863 8.4878866 8.2877124 10.0223274 9.7206718 11.4915327 10.3323098 10.8810384 10.3573027 5.5618882 12.7139771 2.9989537 11.4790988 6.7094450 8.3339353 9.2119450 11.6173366 NA 13.1981773 5.2119467 9.7459968 9.6713765 5.5168000 NA 12.6494122 9.3850097 3.9318343 8.3533008 8.0512720 -0.4605682 5.8249206 9.4313033 9.8098149 10.0883415 10.4516603 9.2468786 10.9036542 1.5395311 9.6662240 15.4270258 8.0903819 9.8782002 11.2334420 10.9226838 5.1542308 0.5395311 8.8109825 11.6832216 NA 11.0066156 6.1093752 6.4343380 6.0941094 9.9058417 11.4739475 10.3842253 12.8421585 12.1155314 9.3323098 10.7910019 10.5329462 11.0413567 10.7945481 4.2944075 11.2185597 10.4643320 0.5395311 10.5839136 8.6401820 3.7142455 5.6056099 11.0478095 9.4628470 10.1905713 9.2571959 5.1542308 10.0020217 14.0045119 12.4867912 9.9210624 10.1244821 0.7969900 0.8207900 -0.0016629 -0.0016629 0.0038854 0.2174500 -0.0145820 -0.1972500 0.2111500 0.2111500 0.2111500 -0.0092666 -0.0092666 -0.0092666 -0.0092666 -0.0092666 -0.0044312 -0.0044312 -0.0027707 -0.0048461 -0.0058140 0.1910200 0.1862900 0.1816400 0.1761800 0.1761800 0.1646000 0.1977100 -0.0161870 0.0026937 -0.0079331 -0.0016629 0.0038854 0.0038854 0.2114600 0.2114600 -0.0145820 -0.1972500 -0.2221900 0.2120700 0.2094700 0.2111500 -0.0085766 -0.0085766 -0.0085766 -0.0085766 -0.0092666 0.0020805 -0.0092666 -0.0092666 -0.0092666 -0.0143360 -0.0044312 -0.0044312 -0.0044312 -0.0027707 -0.0088526 -0.0088526 -0.0092666 -0.2265000 0.1910200 0.1862900 0.0016642 0.1761800 0.1646000 0.1977100 0.2038100 -0.2425700 -0.2504300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.171 -0.226 0.191 0.191 0.000 0.000 0.176 0.176 0.000 0.794 0.198 0.198 0.204 -0.250 0.000 0.000 0.000 0.000 0.000 0.000 0.211 0.211 -0.197 -0.197 0.212 0.212 0.211 0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.171 -0.226 0.191 0.191 0.000 0.000 0.176 0.176 0.000 0.794 0.198 0.198 0.204 -0.250 0.000 0.000 0.000 0.000 0.000 0.000 0.211 0.211 -0.197 -0.197 0.212 0.212 0.211 0.211 0.000 0.000 0.000 0.000 8.0313726 NA 6.3596986 10.9917608 11.1122198 7.6407597 11.0050860 9.9535916 8.7089935 1.1244605 11.9088442 11.8985141 3.3468718 3.7094450 3.5395187 8.1431459 3.9318343 10.4754213 11.1793124 10.6395248 8.6688024 4.7489710 7.1833754 10.4687780 7.0393654 6.1977317 3.7094450 NA 10.9140157 6.9573726 7.7683385 7.7391919 8.0552195 10.3142078 10.0413568 3.9318343 9.1579050 -0.4605682 8.2154767 12.9011892 7.0393654 9.7440906 -0.4605682 1.1244605 8.0825514 1.1244605 5.4464117 NA 4.7489710 4.2944075 3.8614492 10.5246499 1.8614393 10.4568917 10.1833757 9.7044264 6.5839132 10.2425580 11.5880064 9.3484836 1.1244605 4.5395187 10.1486982 1.8614393 NA 0.5395311 3.1244770 12.8977353 4.6687999 8.1394321 12.7139771 9.8272319 10.5893681 11.6173366 11.7556591 8.7731392 10.6342570 14.2189996 12.0035547 8.8109825 9.4893462 -0.4605682 7.2674403 10.7568714 11.690536 12.029368 6.748972 13.619584 9.213712 6.931837 9.135709 7.694338 10.056697 7.070901 7.482034 10.881038 8.592088 4.493718 10.409113 6.397500 7.167418 12.159510 10.260619 10.116948 7.865140 8.883815 12.032875 5.294408 10.516871 10.088341 10.194156 9.650655 10.661700 11.162486 10.360496 10.462847 9.072849 NA 9.508849 7.930849 11.683222 4.583916 11.006616 9.311009 10.886211 9.905842 7.626982 14.255750 9.830690 10.170697 12.983758 11.100807 3.539519 2.998954 10.247741 9.770741 8.982463 TCGA-AC-A23H 90 1 174 NA breast stage iia t2 nx m0 female 2009 NA no infiltrating ductal carcinoma NA white not hispanic or latino NA NA 1 2 NA NA 2 2 1 2 1 1 0 4 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 4 0 4 0 0 4 0 1 0 4 0 4 0 0 0 0 0 0 0 0 0 0 4 0 4 0 4 0 0 0 0 4 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 4 0 4 0 4 0 0 4 1 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 4 4 6 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 4 0 7 7 0 4 0 0 0 4 0 0 4 0 0 4 0 1 0 0 0 4 0 4 7 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0.000115865 3.64484e-05 5.3921568627451 85.0490196078431 2.00534759358289 5.88235294117647 1.67112299465241 9.8732686 10.2292121 11.7010103 9.9209877 8.3293676 10.5003302 9.5521413 10.7080845 11.3263616 15.7998129 8.8778384 11.4151808 2.8361867 16.4579450 2.1581108 8.2068669 4.2956128 9.9196586 4.8361817 13.5548905 -0.7487960 13.0846011 0.5731806 9.2267065 10.8757838 10.6743326 4.9791382 7.3701582 10.6688056 2.3386811 8.7855195 6.9236424 NA 4.4410385 11.0511055 9.5737083 9.8855741 11.6935124 11.9828540 11.4758215 13.3079391 9.5492793 14.9367869 7.4492692 10.2925336 11.6967490 11.1475491 2.8361867 5.4009648 9.6004980 11.1793650 -1.7485536 10.7327640 4.5550001 5.1338594 4.4800324 10.1749157 11.6900086 9.7629695 11.2290333 13.3429827 7.1849071 10.6845414 9.8944596 11.9540388 11.0233251 5.4009648 11.8660416 10.5779272 NA 10.2578935 9.6065679 2.2521128 4.4410385 11.2095882 9.8441410 9.7029430 10.0019238 1.9516624 9.9058528 13.0640459 11.4737098 9.6520962 9.1959288 0.36395000 0.86037000 0.61027000 0.52923000 0.03284500 0.00000000 -0.03742700 -0.00491810 -0.97630000 -0.49277000 0.88226000 -0.00899060 -0.47363000 0.45700000 3.65690000 -0.00443120 -0.50339000 0.43210000 -0.00498440 -0.01144500 -0.01119800 -0.02657700 3.65690000 3.65690000 -0.08606100 -0.06531300 -0.06531300 0.83943000 -0.06325300 -0.01752900 0.37858000 0.58775000 0.03284500 0.03750000 0.00000000 0.00000000 -0.01945200 -0.00491810 -0.00097017 -0.01395300 0.31466000 -1.01590000 0.00791750 0.44509000 0.44647000 0.42351000 -0.44663000 -0.49434000 0.45700000 1.20410000 -0.00443120 -0.03258700 -0.50339000 0.43210000 0.41881000 -0.02726100 -0.01144500 -0.01144500 0.01712400 0.45837000 -0.02657700 -0.53185000 -0.47997000 -0.08606100 -0.06531300 0.88206000 -0.01505400 0.98349000 0.98349000 -0.474 -0.474 0.457 0.000 -0.462 0.432 0.000 0.000 0.000 0.000 0.000 1.101 1.101 -0.480 -0.480 0.000 0.000 0.000 0.860 0.839 0.839 0.000 0.983 0.422 0.422 0.588 0.588 0.000 0.000 0.000 0.000 0.000 0.000 0.313 0.313 0.000 0.442 0.424 0.424 0.428 0.000 -0.474 -0.474 0.457 0.000 -0.462 0.432 0.000 0.000 0.000 0.000 0.000 1.101 1.101 -0.480 -0.480 0.000 0.000 0.000 0.860 0.839 0.839 0.000 0.983 0.422 0.422 0.588 0.588 0.000 0.000 0.000 0.000 0.000 0.000 0.313 0.313 0.000 0.442 0.424 0.424 0.428 0.000 8.734025 5.821072 4.133859 9.162609 12.600498 6.008973 10.496175 8.404781 8.385643 -1.748554 11.361211 12.807892 4.608768 3.006101 2.573156 7.864085 3.460664 9.005269 12.006835 10.591067 10.062592 3.158111 8.949053 9.597176 5.460670 3.573144 4.006101 -1.748554 11.137104 6.032577 6.999409 8.495580 5.710649 9.925365 10.061788 3.499144 8.006104 NA 7.987619 12.688254 7.262444 7.403501 -1.748554 4.694161 8.039119 NA 3.677486 NA 2.251204 3.926464 1.951662 10.895073 1.251204 5.652096 10.437021 9.891914 3.573144 8.343974 12.830533 7.187855 2.499144 2.573156 10.041158 4.338681 NA 0.251204 -0.748796 13.640578 7.228496 8.666959 16.457945 9.961007 11.253856 13.554891 10.016917 9.294928 10.301065 12.668872 6.630595 9.600498 9.368210 -1.748554 9.263841 12.337519 11.0759767 12.5586311 6.4060349 15.0179910 8.8905573 3.7106467 9.0745841 8.5168319 10.9287382 4.4991443 9.0649979 8.8778384 6.8659262 NA 10.4054020 6.8134593 8.8752720 11.7858844 10.5643832 10.8234433 7.9429601 9.9568492 10.4734079 3.9791382 12.5233581 9.8855741 9.9174407 10.7106484 10.8837577 9.7956983 8.5618294 10.5652335 9.4465889 3.5366249 8.9113198 6.8585468 11.1793650 3.6435330 10.7327640 8.0276500 11.3095468 10.1749157 7.3386793 12.7502529 10.5938471 10.5812933 12.0256950 10.1084203 -0.7487960 0.5731806 10.6153515 10.5080152 9.4267663 TCGA-AC-A2B8 84 0 NA 677 breast stage iib t3 n0 (i-) m0 female 2011 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 2 4 3 4 4 4 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.323542e-06 8.323135e-07 6.59340659340659 74.7252747252747 4.3956043956044 12.0879120879121 2.1978021978022 10.77526664 10.41476915 12.03601783 10.55594745 8.15205409 9.32240501 10.12951666 9.84569546 9.76025588 12.43184262 11.38204802 10.37289411 0.01120936 12.57989314 4.16096858 10.11680568 5.82500455 8.49100486 10.24514361 12.46847704 2.01120936 13.07571460 5.44585248 9.51665895 10.86180195 7.05288318 NA 10.83123384 9.32126904 4.14050874 8.15715642 8.19237666 -1.98850436 5.15077493 10.08536596 10.46706536 10.13921878 12.37214008 10.31728609 11.88754953 9.54211834 10.86648226 15.17105636 9.00999820 10.11746025 11.98267816 11.63201700 4.93008916 4.05562083 9.52149405 11.78075238 NA 11.35843055 7.27566732 6.75269106 5.35107350 10.48594440 11.92093004 10.57155727 12.27801098 13.18349566 7.43748910 11.14115137 10.83183624 11.34856761 11.59865040 5.22067820 12.17879940 12.04628123 0.01120936 10.38544883 9.00628484 3.36489455 6.32863723 10.80929120 10.29199521 10.07664059 9.71166422 4.59618976 9.29604849 13.59089393 12.77739097 9.97231226 9.46192017 0.44936000 1.32510000 0.00722170 -0.00968060 -0.00152430 0.46656000 -0.00166290 -0.00277070 -0.00705760 -0.00705760 0.46656000 0.01992300 0.00421780 0.00360760 0.00360760 0.00360760 -0.00010767 -0.00010767 0.45598000 0.00555290 0.00885240 0.01488800 0.01488800 0.00638710 0.01293400 0.01293400 0.01293400 0.01209700 0.01391100 -0.00407260 -0.00238950 0.00722170 -0.00152430 -0.00152430 -0.00138580 -0.00138580 -0.00166290 -0.00277070 -0.00277070 0.00000000 0.00000000 -0.00705760 -0.00083160 -0.00083160 -0.00083160 -0.00083160 0.00421780 0.00421780 0.00360760 0.00360760 -0.49663000 -0.49663000 -0.00010767 -0.00010767 -0.00010767 -0.00761010 0.00555290 0.00555290 0.01014600 -0.48984000 0.01488800 -0.46642000 -0.01422800 -0.47807000 0.01293400 0.01209700 0.00930980 0.01992300 0.01992300 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.40 -0.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.40 -0.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.54941350 6.68365014 5.58108004 10.72073907 10.91886622 6.52218604 11.32934351 9.77386812 8.30376477 3.05561216 11.59700854 11.32352601 3.62593673 4.27801449 5.51106948 8.89310309 4.18115027 11.01140052 11.38095808 10.85926051 9.15333162 2.18113436 7.35995245 10.04154677 6.86609320 8.48086612 2.09868904 NA 11.28531135 7.84094720 7.33765401 8.40782901 8.09736060 10.43153730 10.57585035 6.08803980 8.30928717 0.01120936 7.65688316 12.80253997 8.41849231 7.23522636 -1.98850436 2.09868904 8.91661129 4.96541953 4.65508273 -0.40373271 5.78601080 5.83210518 3.18115027 10.60648193 0.59617186 8.80482767 10.36381970 9.80075805 5.28735039 9.60554897 12.98025113 9.21579555 2.65507700 3.50308154 10.21548992 1.33313746 NA -0.98879064 2.25915194 12.87022530 4.71166560 8.81050609 12.57989314 10.42788740 11.14693373 12.46847704 12.65011283 9.46444875 11.25542620 13.21671226 10.76819764 9.52149405 10.08000270 0.01120936 7.43118500 11.06124312 11.3523263 11.7482605 7.6730023 13.6549657 8.7099292 6.7991275 9.3064195 7.5288940 10.1541387 7.4788303 6.9360372 11.3820480 6.4747491 2.7116711 11.6791121 5.9478625 6.6868997 11.9749334 10.4356532 10.5162917 7.5696453 7.9135997 12.8130338 5.6332772 12.7307550 10.1392188 10.2733192 9.3976259 10.6215572 10.3933081 10.7522700 10.6430836 8.9471261 -0.4037327 9.1899639 7.9177092 11.7807524 4.3150082 11.3584305 8.1798967 10.5170360 10.4859444 7.8023871 13.9374973 10.2261506 10.3927673 12.7028589 10.1780152 -0.4037327 2.9654149 10.4894884 10.5903047 10.0705688 TCGA-AC-A2BK 78 0 NA 2222 breast stage iiia t2 n2a mx female 2006 NA yes infiltrating ductal carcinoma 6 black or african american NA NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.699307e-06 5.895554e-07 16.6666666666667 7.57575757575758 7.57575757575758 48.4848484848485 19.6969696969697 10.1995342 9.4973277 11.5357516 10.8677143 9.3224471 9.1617703 8.7709625 10.8545684 10.6570027 10.5062374 10.7600963 10.6184899 0.3552418 10.6202497 0.3552418 10.4970086 6.3495741 8.2606077 10.3474511 9.5005161 NA 10.2572189 8.2859579 9.6027033 10.4179415 5.7475378 2.0556469 8.2439642 11.4273534 2.2621024 7.6055195 7.9212751 4.7302595 4.2378620 9.6061113 10.4142272 9.7045020 9.7122230 9.9504783 10.5561194 1.9401668 8.8289267 10.7833192 9.9943218 9.0214447 11.5728756 11.1987493 6.9439354 NA 10.0526228 10.4426836 NA 10.6669691 4.9250785 6.2621118 4.1625726 7.3996146 12.3284697 8.6417787 11.6654075 12.5678692 7.5049675 11.0651661 11.0217200 11.5025847 10.9972725 6.9514106 10.9597740 3.2132073 7.4186158 9.6481176 10.5188705 5.9773463 3.7127718 11.5237362 9.5579568 10.9486119 9.9490788 -1.6447582 7.2770614 12.6367162 13.0071133 10.8296872 9.7373043 1.7803000 0.9253300 -0.7910400 0.0736900 0.0495400 0.4021100 1.1661000 -0.1080200 0.0706730 -0.0043669 0.6883100 0.3111300 0.0000000 2.2669000 -0.0225760 -0.0225760 0.0586520 0.0623650 -0.4823900 -0.3768500 -0.7926000 -0.0103700 -0.4055000 -0.3807800 0.4337800 -0.0030475 -0.0820040 0.0182430 -0.3634500 0.0472680 -0.0374900 -0.7910400 -0.8126000 -0.8145900 -0.8147400 -0.7980300 1.1661000 -0.1080200 -0.8235000 0.0479780 -0.3530500 0.0744080 1.2852000 1.2852000 -0.0537460 -0.1352300 0.0000000 0.0000000 -0.7967000 -0.0225760 -0.7999500 -0.7999500 0.0586520 0.0623650 0.0623650 -0.7944400 -0.3683900 -0.3978600 -0.7930500 -0.3297100 -0.0103700 -0.4055000 0.0219520 -0.8235000 -0.0820040 0.0182430 -0.0237030 -0.8135100 0.1577100 0.311 0.000 -0.758 -0.758 0.000 0.000 -0.474 -0.368 -0.793 -0.792 -0.792 -0.381 -0.381 0.107 0.000 0.000 0.000 -0.338 0.316 0.000 0.000 -0.135 -0.372 0.000 0.000 -0.742 0.000 -0.805 -0.799 -0.399 -0.801 1.058 -0.108 0.000 0.000 0.000 0.618 1.285 0.000 0.427 0.427 0.311 0.000 -0.758 -0.758 0.000 0.000 -0.474 -0.368 -0.793 -0.792 -0.792 -0.381 -0.381 0.107 0.000 0.000 0.000 -0.338 0.316 0.000 0.000 -0.135 -0.372 0.000 0.000 -0.742 0.000 -0.805 -0.799 -0.399 -0.801 1.058 -0.108 0.000 0.000 0.000 0.618 1.285 0.000 0.427 0.427 7.50496752 5.92507608 6.36644812 11.02477026 11.69701754 5.02806960 10.16378287 6.41315908 8.16112583 NA 10.74377631 10.41402768 4.13657695 NA 4.08314527 10.49509182 3.64062093 7.27408364 10.48095708 12.38941793 9.98184238 2.05564686 9.28225793 9.37758862 5.74753778 4.62200495 NA 3.11011264 10.06516622 NA 3.16258065 8.99727236 8.79505162 9.22404341 11.33999527 -0.05979566 9.73405755 6.48964729 8.96347557 12.12092128 7.64754261 5.38864418 NA 7.43470578 8.53388568 3.16258065 5.66810494 NA 2.81465296 1.16259677 0.67716994 11.39379688 NA 9.91316303 11.46831175 10.39379693 2.52514178 10.16739807 11.49413251 10.20031871 2.52514178 2.05564686 10.74807483 7.29479993 2.81465296 -0.64475816 9.57982541 9.938952 9.184151 8.635992 10.620250 9.264364 10.916747 9.500516 10.294433 9.288912 10.883186 13.342662 11.300116 10.052623 9.041721 5.925076 7.880742 11.996144 11.1394467 11.5957140 5.5150911 12.6321441 6.9021158 3.2132073 10.3342887 8.9836663 10.2649901 3.5646708 2.0556469 10.7600963 11.6638442 NA 10.2500385 11.1555140 9.0583890 12.4572785 10.9385386 9.9203229 8.1151092 8.9588470 8.8460717 4.2859570 9.1221472 9.7045020 10.2416794 10.0547933 10.9954657 10.3737687 16.3933789 10.4624379 8.5450452 NA 8.1780304 7.5201276 10.4426836 5.1625766 10.6669691 8.2725929 11.0443452 7.3996146 8.5425730 14.9440086 9.8480753 9.5930282 11.7025653 10.8256255 NA -0.6447582 15.1335161 9.4506178 9.9203229 TCGA-AC-A2BM 41 0 NA 3022 breast stage iib t2 n1a mx female 2005 NA no infiltrating ductal carcinoma 1 black or african american NA NA NA 1 1 4 3 1 1 3 4 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 5.26315789473684 21.0526315789474 5.26315789473684 57.8947368421053 10.5263157894737 10.90504367 10.14681023 11.68990094 9.77700934 8.10131810 9.59590734 9.85969209 9.69291098 9.56798136 12.97755740 12.42061580 10.49259950 2.98824840 11.52758291 4.04965690 7.63712114 6.40720827 8.64708781 7.81120705 12.34934103 0.04963077 14.58683396 1.27202319 9.54654300 10.67445147 9.27446156 0.04963077 11.82282820 9.95704747 0.46466827 7.17893868 6.12290459 NA 5.06460698 10.42614323 11.04848149 10.89592989 10.44946800 8.96154722 12.12669425 -0.53533173 9.93586059 15.12854344 8.27622865 10.05481267 12.05855144 11.25055460 3.98825749 2.71261779 9.34886401 11.76447392 -0.53533173 10.89775729 5.39542960 6.84407175 5.00385406 10.08216102 11.66237095 10.39727738 10.51249910 13.79728957 9.07017301 11.24461804 10.84924792 10.38019945 11.33177916 5.63461940 11.62928621 11.52842564 -1.53533173 10.33929074 9.74023613 3.75194568 5.97248818 9.73265062 9.78831132 10.79505024 10.73001552 5.41888818 2.92411889 12.16100906 10.65049810 10.04636487 9.11574518 0.433610 0.422510 0.036229 0.047552 0.072684 0.067661 -0.278700 -1.027100 3.656900 1.692200 0.407270 -0.273680 0.061651 0.049966 3.389300 -0.663460 0.094346 0.094346 -0.630740 -0.640850 0.000000 -0.295810 -0.281920 -0.281920 -0.427350 -0.427350 -0.094196 0.648730 -0.308150 -0.259860 -0.656500 0.036229 0.072684 -0.034631 0.079591 0.094637 -0.289280 -1.032700 -1.073200 0.073833 0.073833 0.072815 -0.663370 -0.663370 -0.663370 -0.881840 0.061651 0.061651 -0.309790 -0.666330 -0.669700 -1.088200 0.094346 0.094346 0.067088 -0.630740 -0.658640 -0.658640 -0.349620 -0.668090 -0.295810 -0.281920 -0.084262 -0.427350 -0.094196 0.648730 -0.094856 -0.195750 0.031999 0.000 0.000 -0.645 -0.645 0.000 0.000 -0.631 -0.659 0.000 -0.668 -0.668 -0.296 -0.296 0.000 0.000 -0.427 -0.427 0.171 0.430 0.649 0.649 -0.100 0.000 -0.253 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 -0.996 -0.996 0.000 0.000 0.433 0.433 -0.663 -0.663 -0.183 -0.183 0.000 0.000 -0.645 -0.645 0.000 0.000 -0.631 -0.659 0.000 -0.668 -0.668 -0.296 -0.296 0.000 0.000 -0.427 -0.427 0.171 0.430 0.649 0.649 -0.100 0.000 -0.253 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 -0.996 -0.996 0.000 0.000 0.433 0.433 -0.663 -0.663 -0.183 -0.183 8.4491119 NA 6.1720534 10.9924149 10.9789144 7.7526369 11.0048216 9.0203755 9.1534596 2.0496656 10.9958312 11.8473864 1.4646683 3.7866173 3.2720531 8.6333655 3.4646944 10.4283121 11.3659376 11.0527054 9.0922275 -0.5353317 8.3195619 9.6947139 6.6446033 1.4646683 NA -1.5353317 10.0687834 7.0038518 5.4533793 7.7616097 5.9882552 10.9065769 10.4745221 4.2720456 8.9675254 NA 6.6495695 11.9416928 10.2431814 5.9076382 NA 5.4304793 8.8078791 0.4646683 1.2720232 -1.5353317 6.4013318 5.0345503 3.2195867 10.4682114 -0.5353317 6.8440717 9.9950999 10.0872029 4.6545157 9.9302600 13.7383799 8.5468424 3.5090877 3.4646944 12.9298135 -0.5353317 NA 2.0496656 5.1229046 15.4979175 6.5090877 9.2061604 11.5275829 9.3373683 10.7584525 12.3493410 11.8039868 8.8602275 11.2712432 13.4065664 10.1026768 9.3488640 7.7149921 0.7865964 6.9605488 12.2717465 10.448756 11.215819 8.487061 13.595142 8.390990 6.552156 9.785494 9.435518 9.661505 7.086746 7.797849 12.420616 6.822246 1.634640 10.401331 7.639619 7.739631 10.851634 9.713214 10.316833 9.685676 8.751251 13.896354 6.992170 11.907320 10.895930 10.269228 9.057150 10.230394 8.788874 11.132692 9.901925 8.712621 NA 8.399136 6.567457 11.764474 6.839733 10.897757 5.219583 9.771894 10.082161 7.811207 12.964913 9.983838 9.723260 11.952408 9.625195 2.712618 1.049631 11.641023 10.220416 9.079403 TCGA-AC-A2FB 65 0 NA 1234 breast stage iia t2 n0 mx female 2009 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 5 3 3 4 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.040392e-07 7.14285714285714 21.4285714285714 0 42.8571428571429 28.5714285714286 10.8157156 10.0834993 12.1704803 10.2540468 8.2219037 9.6245524 10.4589904 9.7958593 10.1409611 11.5142379 11.6953649 10.6351779 4.4192422 16.1648194 4.2328296 9.0168982 6.9101222 8.9616861 11.2380647 13.4635933 1.6967951 13.2653007 6.4246954 9.3413518 10.2382584 5.0042047 NA 10.5547556 8.9101219 3.3290375 8.1805905 7.4082694 0.6967951 5.4301280 9.9447021 10.5646710 9.3268595 12.5190267 9.9941493 11.9318314 11.6023120 11.4656205 14.5920090 8.3942702 9.9950663 10.9306339 11.7677005 5.8586624 2.7671675 9.4442962 12.3034573 NA 11.2550039 6.2574897 7.9275155 4.3055839 10.7199744 11.8102562 10.3100115 12.3045672 12.7561190 7.5891657 11.1840116 10.7279519 11.4781342 11.5934097 5.1950247 12.7754591 11.6987456 0.9598443 10.2116857 9.2673893 3.5471783 7.7389813 10.3221181 10.3660140 10.2187675 10.2881098 4.3748447 10.5973394 13.3824432 13.4274569 10.2230781 9.2749584 0.02589200 0.22731000 0.00027728 0.00027728 0.00041593 0.00444110 -0.00193990 -0.00193990 0.00000000 0.00000000 0.00000000 -0.00083160 -0.00041585 0.00277450 -0.00429290 -0.22084000 -0.01326400 -0.00443120 0.00722170 -0.00124730 0.00402430 -0.22231000 2.99330000 0.01656500 -0.00830050 -0.00830050 -0.00843850 -0.00069303 -0.00608140 0.02589200 -0.00387790 0.00027728 0.00041593 0.00041593 0.00444110 0.00444110 -0.00193990 -0.00193990 -0.00498440 0.00013863 0.00013863 0.00000000 0.00249460 -0.00207840 -0.00207840 -0.00546840 -0.00041585 -0.00041585 0.00277450 -0.00429290 -0.22158000 -0.22158000 -0.01326400 -0.00443120 -0.00443120 -0.00088013 -0.00124730 -0.00124730 0.00402430 -0.15669000 -0.22231000 0.76772000 0.00194180 -0.00407710 -0.00843850 -0.00069303 -0.00055444 0.00110930 0.00110930 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 -0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.201 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 -0.222 0.000 0.000 0.000 0.000 0.000 0.000 0.201 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.11631329 NA 5.59401401 10.08047886 11.46776871 6.47029607 11.14695479 10.24667470 8.78953169 5.45166281 11.29370965 11.05177319 4.92943596 2.62276640 3.80110691 7.79691113 4.32904464 10.95345499 11.68843807 10.44630876 9.14137531 3.76716746 7.39165432 10.53912488 9.40551358 8.37061374 2.07529302 NA 11.27797510 7.65793506 7.44630917 8.58186076 7.87469247 9.77504280 10.66486528 4.85057942 8.09765398 -0.04022984 8.41787361 12.96467311 7.59884828 7.70127596 -0.62504400 4.18219966 8.61325132 5.14303009 4.76716216 1.18218377 8.40275244 7.10276730 5.39721427 9.90476496 1.95980724 10.28136130 10.07875005 9.64922456 6.37484648 10.92583361 13.90378884 9.73733828 4.76716216 4.92943596 11.70043296 2.46231413 NA -0.62504400 -0.04022984 13.043662 5.004205 8.438242 16.164819 10.576278 10.414794 13.463593 12.900918 8.918845 11.127227 13.541637 11.481900 9.444296 8.534718 -0.625044 7.349261 10.872199 11.054327 11.673625 7.715208 14.032694 8.790588 8.937089 8.877678 9.466943 10.245261 9.028587 8.097654 11.695365 5.493788 -0.625044 11.064408 7.248291 6.869503 11.729784 11.318277 10.522051 8.487104 8.027692 13.767600 9.017801 12.393447 9.326860 10.619805 9.585518 11.784105 9.975689 10.784503 10.649225 9.132236 8.166009 9.003502 8.556123 12.303457 8.296687 11.255004 4.281735 10.903362 10.719974 7.576970 14.159865 10.145510 10.872948 13.298638 10.201792 8.618021 3.732399 10.879169 10.386772 9.937566 TCGA-AC-A2FE 62 1 2636 NA breast stage iiic t3 n3a mx female 2005 NA yes infiltrating lobular carcinoma 18 white not hispanic or latino NA NA 3 3 4 3 6 4 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.040392e-07 7.69230769230769 38.4615384615385 15.3846153846154 23.0769230769231 15.3846153846154 9.7955244 9.3924928 11.0721414 9.0600650 8.3006225 9.3112022 9.8194370 9.6086089 10.6911187 11.7721025 10.8531316 10.1566985 2.5556199 13.0835518 4.0625708 9.8870003 6.6870621 8.5365033 9.1903274 12.1619684 3.4369613 13.2364803 7.1687714 9.8968861 10.1683834 5.6652364 NA 12.7196263 7.5697789 3.9801076 8.6619338 7.5436985 -0.6922218 3.8926436 9.5472829 10.5674277 9.8095215 11.3319584 10.0504149 11.1739974 4.5744709 11.1627475 14.7724535 7.6626171 9.9703528 11.3197851 10.8898264 6.0081238 5.0356063 8.6408396 10.7982846 -1.6924549 10.6408398 6.4625023 7.1625525 5.0890447 10.4007718 11.5839542 10.7793596 11.8947587 12.6112511 9.1037240 10.8390659 10.5204209 11.0684043 10.2123190 4.6114675 10.7042892 11.4978177 -1.6924549 10.4523427 9.1278633 2.5563804 6.3244920 11.1258671 10.2358326 10.1198617 9.8075303 2.6296131 9.6685315 13.3946914 13.3118171 10.0799990 9.1238682 0.3510400 0.3510400 0.0000000 -0.0049844 -0.0073339 0.3587100 -0.0013858 -0.0013858 0.3595700 0.3595700 -0.0241140 0.0040243 0.0016642 -0.0019399 -0.3613600 0.3754500 0.0048579 0.0048579 -0.0083005 0.0000000 0.0147490 0.0206230 0.0206230 0.0206230 0.0310140 0.0310140 0.0310140 0.0151680 -0.3705300 -0.3705300 -0.0098185 0.0095883 -0.0073339 -0.0073339 -0.0131270 -0.0131270 -0.0013858 -0.0013858 -0.0013858 -0.0095426 -0.0095426 0.3733100 0.0072217 0.0072217 0.0072217 0.0160060 0.0016642 0.0016642 -0.0019399 -0.3613600 -0.3810000 -0.3890600 0.0048579 0.0048579 0.0048579 -0.0083005 0.0000000 0.0000000 0.0147490 -0.3673700 0.0206230 0.0206230 0.0011093 0.0310140 0.0310140 0.0109330 -0.3841400 0.0431570 0.0370760 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.367 0.000 0.000 0.000 0.000 0.000 0.000 -0.019 0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.359 0.359 0.000 0.000 0.000 0.000 0.360 0.360 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.367 0.000 0.000 0.000 0.000 0.000 0.000 -0.019 0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.359 0.359 0.000 0.000 0.000 0.000 0.360 0.360 0.000 0.000 0.000 0.000 8.7506279 3.3951451 7.6250973 11.1770855 11.0510462 7.8711093 11.6447488 9.0226511 9.6268541 3.5556076 12.2506570 11.1126422 2.6999957 2.5556199 3.7995329 8.3383513 4.8312439 10.7441357 10.7757993 10.6652364 9.1994682 5.2849656 7.6892272 10.2250565 8.8273208 7.5171379 0.3076617 NA 10.6848949 6.7671158 7.5220032 8.0491515 6.9694625 11.4720571 9.8385784 5.1405742 9.0499939 -1.6924549 7.9641092 12.5933756 8.8184486 8.2575109 NA 5.9223953 8.2977884 5.1020996 4.9515412 -0.6922218 7.5627133 5.4093977 4.6652336 10.3683803 -0.1073370 8.0791738 10.3737736 9.6028794 5.4369680 10.3599128 13.4475155 9.2009859 3.2618768 4.9941860 12.5599802 2.6999957 -1.6924549 NA 3.0625708 11.5788556 5.6114645 8.5567980 13.0835518 10.0841174 10.5349995 12.1619684 10.9913370 9.5030567 10.3241445 13.5457905 10.7464763 8.6408396 8.3424832 -0.6922218 7.5292712 10.5721270 11.539506 11.905155 7.102101 13.858999 8.594242 8.639721 8.336972 8.033903 10.316708 8.947025 6.858431 10.853132 7.028784 3.214576 10.715749 8.628485 7.099043 10.471963 10.694894 10.429542 7.485104 9.003783 11.601300 7.102101 10.379485 9.809522 10.542502 9.459335 10.933393 10.446276 11.034115 10.409988 8.176507 1.115033 9.379341 7.453565 10.798285 5.951541 10.640840 6.962320 10.970575 10.400772 7.477609 13.391330 9.471963 9.957839 12.692603 11.287110 2.892644 -1.692455 10.620284 9.815479 9.486349 TCGA-AC-A2FF NA 0 NA 2759 breast stage iib t2 n1 mx female 2006 NA yes infiltrating lobular carcinoma 3 asian not hispanic or latino NA NA 3 3 4 3 3 3 4 3 6 3 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 0 0 30 10 30 30 10.4885582 10.2846425 11.9337192 9.9228704 8.3137742 9.3773329 10.2380816 9.6310219 9.6805563 10.1719564 11.1077162 10.6505199 2.0658480 13.3414338 4.4314959 9.5815463 7.4921112 9.0967257 10.2116806 12.3547125 3.6133313 13.2142741 5.8166176 9.1202941 10.1140190 4.0378302 -1.6344194 11.9831715 8.9559939 4.7747976 8.6345334 7.8948372 -0.6346434 6.4098016 9.7937668 10.2507218 10.0984221 12.1793883 10.3811702 11.9246643 4.3426898 11.0033900 14.4360937 8.3339009 9.6280888 11.8788876 11.6584472 6.7141342 2.9503751 9.7240580 12.1362771 -1.6344194 11.1335911 5.9874596 7.1791876 5.4946908 10.6782896 12.0719027 10.3272181 11.9991966 12.8309094 7.8083503 11.0325183 10.7865117 11.3855186 11.7149644 5.4206879 12.2223185 12.2878053 -1.6344194 10.3773328 9.3491129 3.9898021 6.4739314 11.3747105 10.6519645 10.2965136 10.0847955 4.3426898 8.5663053 13.8169720 12.3225088 10.4189932 9.6198449 0.0081242 0.0107030 0.0114000 0.0171240 -0.0081624 0.0251160 0.0000000 0.0000000 0.0204830 0.0204830 0.0161460 0.0037465 0.0037465 -0.0510460 -0.0510460 -0.0510460 -0.0329960 -0.0329960 -0.0091010 -0.0193140 0.0217440 -0.0742770 -0.0742770 0.0070826 -0.0051227 -0.0051227 -0.0051227 0.0144700 0.0153080 0.0081242 -0.1124700 0.0114000 -0.0081624 -0.0081624 0.0251160 0.0284810 0.0000000 0.0000000 -0.0074720 0.0040243 0.0040243 0.0197830 0.0056919 -0.1767700 -0.1767700 -0.1767700 0.0037465 0.0036436 -0.0510460 -0.0510460 -0.0510460 -0.0510460 -0.0329960 -0.0329960 -0.0329960 -0.0013858 -0.0193140 -0.0232300 0.0217440 -0.1654800 -0.0742770 -0.0742770 -0.1260300 -0.0051227 -0.0051227 0.0141900 0.0037465 -0.1286200 -0.1188700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 -0.165 0.000 0.000 -0.121 -0.121 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.129 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 -0.165 0.000 0.000 -0.121 -0.121 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.129 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 8.19987794 0.36535660 6.77054761 10.18478746 11.23075337 6.61622682 11.02004279 10.20876646 8.02584827 5.34268629 11.72378320 11.23287855 3.22339166 5.21089534 4.85725947 8.92669479 4.22338393 10.39882972 11.49098166 10.19314634 8.57607803 4.65081050 8.09672569 10.30204470 8.35124846 8.67260744 0.95039376 -1.63441943 11.14348385 8.65887840 8.07276610 7.91422845 7.75557596 9.72834776 10.56016362 4.66918554 8.02004265 3.31960348 8.54033227 13.31937579 8.25262712 8.14676620 NA 3.88896724 8.24038828 -0.04960624 5.00926206 0.36535660 7.13359127 5.89186631 5.00926206 10.35728279 -0.63464340 10.41423418 10.47882330 9.68507884 6.58457472 10.62043530 12.34071736 9.87962766 4.17275952 4.96531793 10.46902238 0.36535660 NA -0.04960624 2.88896724 13.0715250 5.4098016 9.0404815 13.3414338 10.7485710 10.1537172 12.3547125 12.0900272 9.0997691 11.0675794 12.8091273 10.5227536 9.7240580 8.3863868 -0.6346434 7.7769179 10.8360656 11.4213670 11.4410530 6.7577247 13.7402414 9.0245106 7.8391124 8.3597601 8.6940817 10.1731038 7.4233983 7.3569282 11.1077162 5.5552302 1.8248493 11.1616492 7.2449898 6.6653928 12.1943366 10.9079550 10.4294758 8.6565775 7.9103711 12.7053959 9.1377212 10.9576465 10.0984221 10.4778463 9.7948135 11.1399879 10.1541251 10.7644176 10.8534979 9.5990263 NA 9.4750285 8.4080235 12.1362771 8.8073134 11.1335911 7.5303135 10.6095059 10.6782896 7.3960738 14.7144286 10.1533093 10.6862073 12.4746661 10.0593292 4.0092665 0.3653566 10.6053036 10.4244131 10.1650930 TCGA-AC-A2FG 79 0 NA 1853 breast stage iib t2 n1a mx female 2007 NA no infiltrating lobular carcinoma 1 white NA NA NA 3 1 4 3 3 3 4 3 4 3 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-06 4.161568e-07 18.6046511627907 20.9302325581395 0 30.2325581395349 30.2325581395349 10.282394 9.662798 11.784470 9.614969 8.506072 9.186841 10.945643 9.487964 10.697657 11.818923 9.611150 10.604922 3.337169 13.110864 3.666484 9.910143 6.967653 8.776287 10.302367 12.832774 1.958657 12.688284 8.014669 9.418729 11.177993 6.507100 NA 11.057924 8.601558 1.051790 8.318560 7.711769 1.221692 4.666484 10.025470 10.463813 10.240362 11.585103 10.163235 11.437096 5.738273 12.216523 14.521717 8.077660 10.039740 11.466722 11.096509 5.337176 1.752192 8.829028 12.465599 -1.948419 11.061951 5.017557 5.606362 4.970637 10.155061 12.051156 10.447039 12.356552 12.995661 8.112469 10.889992 11.081890 11.614612 11.317974 4.946591 12.120047 10.900005 6.211645 10.131924 9.031913 4.055829 5.005970 10.915766 10.392736 10.300590 9.716665 4.651683 9.748306 13.024977 12.387582 10.093090 9.881496 0.94936000 1.01610000 0.00138680 -0.00387790 -0.00041585 0.00249690 -0.00360110 -0.00360110 0.00069327 0.00069327 0.00069327 -0.00044851 -0.00044851 0.00041593 0.00041593 0.00041593 -0.00138580 -0.00138580 0.01502800 0.00527490 0.01694600 -0.00346270 -0.00346270 -0.00346270 -0.02303600 -0.00013862 -0.00013862 0.01349200 0.00402430 0.00402430 -0.00152430 0.00138680 -0.00041585 -0.00041585 0.40894000 -0.00041585 -0.00360110 -0.00360110 -0.00360110 -0.00415460 -0.00415460 0.00069327 0.00129640 0.00129640 0.00129640 0.00610900 -0.00044851 0.01824300 -0.54462000 0.00041593 -0.54239000 -0.53348000 -0.00138580 -0.00138580 -0.00138580 -0.00136630 0.00527490 0.00527490 0.00615620 -0.54179000 -0.00346270 -0.00346270 0.00805670 -0.02303600 -0.00013862 0.01349200 0.00124810 0.01223700 0.07656600 0.000 0.000 -0.542 -0.542 0.000 0.000 0.000 0.000 0.000 0.515 -0.542 0.000 0.000 0.000 0.000 0.000 0.000 0.949 0.949 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.542 -0.542 0.000 0.000 0.000 0.000 0.000 0.515 -0.542 0.000 0.000 0.000 0.000 0.000 0.000 0.949 0.949 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3486892 NA 5.3646565 10.6463308 11.3078342 7.3952248 12.4316251 9.7192305 8.3656536 5.3646565 11.7644074 10.7263713 3.5753365 4.7099853 4.2805926 8.2216978 3.0961606 10.0741408 11.8069735 11.3554110 9.4440904 4.9344174 7.7745802 10.6015576 7.1016217 7.6197292 3.3737039 NA 11.0103256 8.2925641 7.0432953 7.7241980 7.4632840 10.4346077 10.4598373 5.5831550 8.3770786 NA 8.7028248 13.4575792 8.8623444 7.0879465 -0.9481407 1.8591347 8.7591322 3.0059748 3.6063593 2.8591347 4.6956264 4.8369290 3.8846663 10.1645383 1.9586571 10.2775829 10.8635490 9.7762868 4.7660173 10.3916230 11.2105404 8.5841290 1.7521920 3.3737039 11.8974590 -0.9481407 NA 2.8591347 1.9586571 12.1676416 4.2805926 8.8909768 13.1108639 10.6109111 10.9580999 12.8327740 12.9024482 9.4594656 10.8435464 13.2764153 10.8054076 8.8290282 9.6651021 -0.9481407 7.8671564 11.2799904 11.141885 12.182183 7.475939 14.331417 8.755676 6.000140 8.849435 7.811661 10.083447 6.364656 7.798287 9.611150 5.890977 -0.363271 10.882486 7.895694 5.986290 11.792397 10.388280 10.969518 8.081060 7.777991 12.293533 6.575335 11.818933 10.240362 10.439790 9.737836 11.413580 9.498339 10.130257 10.591659 8.799966 NA 8.844832 7.268325 12.465599 7.057397 11.061951 6.734768 11.014308 10.155061 7.330222 14.273435 10.220132 10.205008 12.579433 10.128589 0.636729 1.221692 10.382970 10.216051 10.043649 TCGA-AC-A2FK 45 0 NA 2650 breast stage iiic t2 n3a m0 female 2006 NA yes infiltrating lobular carcinoma 3 white hispanic or latino NA NA 3 5 NA NA 3 3 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 10.820466 10.311002 11.791442 10.341480 8.324572 9.036510 10.237453 10.049885 11.163033 13.708911 10.866203 10.829659 2.290159 13.328506 5.306448 10.752929 7.192660 10.133926 10.058332 11.543673 0.971516 11.695289 8.551816 9.264406 10.795418 5.896805 NA 9.524386 8.748089 5.430630 9.034064 8.752557 1.415705 5.306448 10.439433 10.037120 10.165548 12.489486 10.663606 12.286044 7.423173 10.006266 15.178805 7.942008 9.573026 11.989484 11.895964 6.188268 4.188266 9.757754 13.797492 NA 11.477950 5.585603 7.445426 5.517216 10.509316 12.153349 10.238515 12.954999 13.124978 7.839145 11.278316 11.207572 11.472768 11.962734 5.598901 11.870664 11.583515 1.152638 10.150953 9.367935 4.810741 4.761455 10.826484 10.512394 10.237984 10.064935 5.306448 9.616986 13.637266 13.583515 10.166107 9.834234 0.01791200 0.01791200 0.00147410 0.00147410 -0.00046716 -0.00294290 -0.00046716 -0.00046716 -0.00199110 -0.00199110 -0.00199110 -0.00420580 -0.00420580 0.00202910 0.00202910 0.00202910 -0.00365230 -0.00365230 0.00272310 -0.00079641 0.00133540 0.00014529 0.00014529 0.00014529 0.00856200 0.00856200 0.00856200 -0.00060575 0.00494540 0.01791200 0.00330800 0.00147410 -0.00046716 -0.00337560 -0.00294290 -0.00294290 -0.00046716 -0.00046716 -0.00046716 -0.00862770 -0.00862770 -0.00199110 0.00327850 0.00327850 0.00327850 0.00327850 -0.00420580 -0.00420580 0.00202910 0.00202910 0.00202910 0.00202910 -0.00365230 -0.00365230 -0.00365230 0.00272310 -0.00079641 0.00466750 0.00133540 -0.00129860 0.00014529 0.00014529 0.01107000 -0.00240660 0.00856200 -0.00060575 -0.00060575 -0.01716700 -0.01716700 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.9181793 NA 5.8641391 10.5224598 11.3092332 6.6232465 11.0236255 10.4132911 8.1872125 6.1253370 11.9825257 10.5854118 2.9181763 0.4156505 5.6508966 8.8475247 3.9600019 9.9567754 11.4853524 10.1610730 8.8307164 3.0786440 7.9155245 10.3934357 7.0106254 9.1103270 0.4156505 NA 11.9901147 6.9753745 8.3640462 8.0131105 10.5026997 10.2290326 10.4933847 5.7010805 8.0230091 0.8307421 9.6267560 13.3885390 9.3689052 6.7907186 -1.1694201 5.1882664 7.9905879 -1.1694201 4.0786440 10.0762690 5.3225700 5.6170516 5.2736613 10.1515169 3.8307117 10.9852181 10.7596048 9.6572649 4.4156776 9.8307163 11.7533008 9.0559236 3.5855996 3.2901442 10.9902723 NA NA 2.0006491 2.8307218 11.748918 3.531157 8.830716 13.328506 10.580623 10.002519 11.543673 12.253964 9.198961 11.355503 13.241896 11.475023 9.757754 7.923474 NA 7.650895 11.105386 11.2238386 11.6015867 7.4996012 14.6197145 9.0547180 7.6055032 9.4109749 7.2057561 10.4244949 7.0928110 7.1705661 10.8662028 3.6380738 5.3064482 11.5847687 9.2390462 5.6883231 13.0343702 10.9451094 10.2262505 8.6022059 8.2187337 11.9310502 7.4380466 11.1860041 10.1655482 10.1149621 9.5577859 12.3342937 10.3528074 10.4504778 10.7939737 9.6777737 NA 9.3875194 7.6949025 13.7974921 7.4491016 11.4779499 6.2983211 11.2254470 10.5093165 7.6636065 14.3847055 9.7338451 10.4010464 13.3129571 10.2632583 1.8307015 0.4156505 10.8812452 10.6173944 10.2772828 TCGA-AC-A2FM 87 1 792 NA breast stage iib t2 n1mi m0 female 2004 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 2 2 2 1 1 4 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 3.467973e-07 22.2222222222222 13.8888888888889 8.33333333333333 27.7777777777778 27.7777777777778 9.800491294 9.414174865 11.183901009 9.146328100 9.191546859 7.873735083 11.439561223 9.304866470 9.000549641 13.708102442 11.015296287 10.627556409 3.173287369 14.443136186 2.877842389 8.688703157 9.352098395 8.476399511 10.441122292 13.503091560 0.418459838 13.657297557 1.877822762 9.715713743 11.565930652 4.199766559 -1.581648112 10.219307579 10.222942183 2.003386356 9.228979302 6.319274704 NA 4.372603915 10.052311141 9.966747972 9.990634273 9.593333414 9.774309376 11.064516375 1.003386356 11.656215192 13.562826981 9.947013267 9.638786137 11.521203595 11.329986947 4.793448547 6.999608841 8.812870403 9.684022708 -1.581648112 10.658602814 9.362387696 3.173287369 3.062259894 10.578909474 11.637727516 9.799950676 12.096127351 12.052878462 7.974913567 10.067663856 9.851993217 10.490540348 10.531173035 4.861349980 11.142495192 12.325110459 0.003314389 10.363485734 9.528238423 3.595133630 3.877842389 11.053445559 10.197716634 10.789912119 10.471654895 1.877822762 9.079294901 11.437303332 10.066765295 9.713028503 9.134369587 0.326560 0.302980 0.273630 0.257930 -0.026768 -0.021235 -0.123300 -0.123300 1.857100 1.857100 1.827800 -0.093453 -0.093453 0.388490 0.986380 -0.661420 1.876900 0.492860 0.365640 0.787750 -0.155280 -0.123690 0.857000 0.857000 3.372500 2.644100 3.656900 0.388660 -0.643580 -0.655680 -0.581370 0.273630 0.452410 -0.022332 -0.021235 -0.029926 -0.123300 -0.123300 -0.098682 0.273480 -0.127460 1.857100 0.253240 0.253240 0.253240 0.287070 -0.093453 -0.073076 0.388490 -0.651830 -0.661420 -0.661420 -1.161300 0.492860 0.582020 0.559390 0.782920 0.809080 -0.158090 -0.649030 -0.123690 0.857000 0.417470 -0.623220 -0.654450 0.388660 0.254490 -0.638590 -0.638590 0.000 0.000 -0.263 -0.652 0.493 0.493 0.366 0.783 -0.158 0.000 -0.574 0.733 0.857 -0.653 -0.653 -0.623 -0.623 -0.341 0.303 0.389 0.389 0.254 -0.639 -0.586 -0.586 0.274 0.274 0.000 0.000 0.000 0.000 -0.123 -0.123 0.273 0.273 1.857 1.857 0.253 0.253 0.000 0.000 0.000 0.000 -0.263 -0.652 0.493 0.493 0.366 0.783 -0.158 0.000 -0.574 0.733 0.857 -0.653 -0.653 -0.623 -0.623 -0.341 0.303 0.389 0.389 0.254 -0.639 -0.586 -0.586 0.274 0.274 0.000 0.000 0.000 0.000 -0.123 -0.123 0.273 0.273 1.857 1.857 0.253 0.253 0.000 0.000 8.1649220 -1.5816481 4.9882620 10.9495454 11.5341017 6.6759838 11.0618130 8.3182481 9.0507942 1.0033864 11.1223113 10.7755391 6.2512968 2.7403448 2.5883249 7.7803514 4.4628049 8.6351536 11.1991525 10.4452770 9.6544219 3.0033684 7.9380440 10.2825939 6.8819325 6.4682558 -0.5816481 NA 10.3870745 8.2591858 10.6734363 7.0367934 8.7118793 12.0732965 9.8905908 2.9419702 9.5560393 NA 7.1326529 11.7216177 8.3726039 8.5553990 NA 7.3132259 8.5308472 4.5883309 6.0694594 -0.5816481 2.9419702 6.6636748 1.2257685 10.8592769 -0.5816481 7.1292140 10.1480285 10.2201161 4.8941435 8.4393875 11.2207222 7.4324283 2.3253001 3.1732874 12.3095269 3.6663362 NA 2.6663249 3.3726039 14.221774273 6.827798705 8.841523779 14.443136186 10.190095286 10.410283858 13.503091560 13.509305805 8.292943215 11.095907151 12.131686836 11.632878632 8.812870403 8.198127245 0.003314389 8.137796541 11.866524024 11.500390 13.057296 5.827799 12.612778 8.252879 4.372604 10.620225 9.163242 10.827459 5.276389 9.686365 11.015296 7.500557 2.118858 10.627861 9.356517 7.551730 9.288002 10.313983 11.501056 8.917257 10.279107 11.871807 3.418406 10.488210 9.990634 10.862387 9.945885 12.238088 9.960472 10.242969 10.677268 8.899198 -1.581648 8.860304 5.276389 9.684023 3.810721 10.658603 4.090836 11.814076 10.578909 6.583314 12.544144 10.137369 9.555399 12.205086 10.560515 -1.581648 NA 9.533451 10.067215 10.035875 TCGA-AC-A2FO 65 0 NA 2255 breast stage iib t2 n1 mx female 2005 NA no infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 1 3 NA NA 6 4 4 8 6 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 13.6363636363636 59.0909090909091 4.54545454545455 22.7272727272727 0 9.8804884 9.6491627 11.4810009 9.2999718 8.6365626 9.3479933 9.9618616 9.6706081 9.9551121 12.7178087 11.5511198 10.5357459 -1.3662433 13.5625437 3.3341821 9.4555216 6.5644849 8.7118985 9.4273510 12.2823300 -0.3662433 12.9535610 4.8816744 9.3591139 10.6060096 8.7973973 NA 10.3079400 8.6110277 2.4411116 8.1395595 7.2484580 NA 5.0600128 10.1084677 10.0415466 9.5755290 11.4151075 10.2224624 11.0893318 0.9556848 11.1117589 14.8103884 8.4795200 11.5374413 11.3752147 10.9733194 4.9735975 7.2521337 9.1873771 11.3859193 NA 11.1724217 9.0931793 7.1135276 4.6337451 10.4427119 11.7312861 10.1738757 11.6971428 12.7364616 7.9005342 10.8706589 10.8276550 11.1597578 10.3865465 4.9005336 11.8669180 11.2352864 7.8721522 10.2443113 9.1738757 4.1172379 6.6726672 10.3432623 10.2364466 10.3890526 9.7973974 3.5406349 7.3785818 12.9634039 12.7950371 9.5179183 9.1873771 -0.01078400 0.47101000 -0.12603000 -0.12603000 0.03453600 -0.00401620 -0.05145100 -0.05145100 2.76610000 -0.34263000 0.10322000 0.56401000 0.02511000 0.01369300 0.01369300 0.01369300 0.07915900 0.19725000 -0.05185600 -0.01023200 -0.00097017 0.03171800 0.03171800 0.03171800 0.13776000 0.13776000 0.13776000 1.73390000 0.04131700 -0.01078400 0.02226400 -0.12603000 -0.01064600 0.05979400 -0.00401620 -0.00401620 -0.05145100 -0.05145100 -0.07214000 -0.06464300 -0.02342900 -0.36181000 -0.37786000 -0.00747200 -0.00747200 -0.03925800 0.02511000 0.03919500 0.01369300 0.01369300 -0.37865000 -0.37865000 0.08204300 -0.33918000 -0.33918000 -0.05185600 -0.01023200 -0.01023200 0.00791750 -0.32332000 0.03171800 0.03171800 0.04623700 0.13776000 0.13776000 0.09304000 0.00208050 0.01754400 0.01112100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.227 -0.093 0.000 0.000 -0.420 0.000 0.138 0.138 0.000 0.471 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.362 -0.259 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.227 -0.093 0.000 0.000 -0.420 0.000 0.138 0.138 0.000 0.471 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.362 -0.259 0.000 0.000 0.000 0.000 8.3393802 2.6337567 5.4917281 10.0563382 11.1651292 7.3742709 10.4650549 9.6164847 8.6615155 4.3061747 11.9262132 11.1409577 8.6657935 4.6110248 3.3341821 8.2484575 4.2776054 10.9182827 11.4303958 10.4811966 9.1816062 3.1573025 7.9846867 10.2224624 8.6533385 7.7212106 0.2187192 -1.3662433 11.3754254 8.0725394 7.2299378 7.5376292 7.7025260 10.2932666 9.9426555 5.8625655 8.0746168 -1.3662433 8.4167460 12.8279659 9.1931249 7.5163911 -1.3662433 6.0087872 8.0870183 -1.3662433 4.8235711 0.2187192 7.4216500 5.6231148 4.8036714 10.2290053 -1.3662433 9.3852919 10.1811243 9.2955258 6.0431389 10.6227874 13.2321492 9.6224324 4.7422704 5.1729075 12.8654939 1.8036817 NA -1.3662433 2.3341964 13.062929 5.060013 8.592300 13.562544 10.460296 10.389053 12.282330 12.321779 9.292852 10.801479 13.473198 11.470981 9.187377 9.029282 1.633757 7.788566 11.359753 10.9688589 11.6519479 6.0346273 14.2903664 9.0011624 8.1825697 7.9098721 7.6561152 10.1519336 8.3079398 8.4745257 11.5511198 6.4539274 -0.3662433 11.0225723 5.2336619 6.6270829 9.9657843 10.7617420 10.6822346 8.3919709 8.4183827 11.6875040 7.8625667 12.0214703 9.5755290 10.5861250 9.6442758 11.1089745 9.5893976 10.1185706 10.4224661 8.5224909 NA 9.0377822 7.3743040 11.3859193 8.8529162 11.1724217 6.2036025 10.7716995 10.4427119 7.2703720 13.9315231 10.3612428 10.3986193 12.7293096 10.1548573 6.1806432 2.5406473 10.1365795 10.1955130 9.8074248 TCGA-AC-A2QH 58 0 NA 1005 breast stage iib t3 n0 mx female 2011 NA yes metaplastic carcinoma 0 white not hispanic or latino NA NA 4 4 NA NA 5 2 2 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.508365e-07 2.080784e-07 26.3157894736842 21.0526315789474 0 42.1052631578947 10.5263157894737 8.8532774 10.1413807 11.4582452 9.0921078 8.6785223 7.1137380 5.6756155 10.9038148 10.7444817 3.7214164 10.5431945 10.6469749 3.4218561 10.2162760 2.7214164 11.5011398 6.5027809 9.2702423 8.7129424 6.9112446 NA 7.3434727 4.9308745 9.6814224 2.8913414 4.0433445 1.3063789 8.5384039 11.1142745 3.7214164 7.5223202 10.8869556 3.0433445 4.8913463 9.1849447 10.7430945 11.2027154 9.1518730 9.1890259 9.3867564 NA 5.2760090 13.9838090 8.7635722 9.6565856 12.6816034 10.3157451 4.3652796 6.8609715 9.3471292 10.2625170 -0.2785836 10.2062433 4.8088844 6.3938452 5.5287745 9.4270528 12.1424333 10.0456011 11.6697877 12.4922908 8.8377645 10.6987004 10.6700797 10.7610250 11.0166154 4.8507044 12.0972744 8.8988399 1.3063789 10.3498660 9.8403616 5.1140796 6.0433489 12.3075565 10.1705691 11.1471609 9.2988494 2.7214164 5.0433489 13.2009481 11.6951178 9.7424004 10.6055910 0.086049 0.098270 0.035383 0.240930 -0.036674 0.084643 0.709830 -0.051991 -0.747770 -0.629030 1.249500 -0.676220 -0.256000 -0.407160 -0.670390 -0.670390 0.792200 -0.056307 -0.331790 -0.621500 -0.064374 3.656900 -0.689880 0.230240 -0.245570 0.063509 0.063509 0.146520 0.024548 0.086049 -0.264800 0.048688 0.129180 -0.081339 0.084643 0.027778 0.709830 -0.446520 1.102400 0.581120 -0.965770 0.111550 -0.228590 -0.466770 -0.427460 -0.415990 -0.278930 -0.268530 -0.636610 -0.670390 -0.394190 -0.394190 0.792200 -0.070670 -0.056274 -0.336310 -0.621500 -0.621500 0.334960 -0.055634 3.163000 -0.689880 0.569520 -0.245570 0.063509 0.112720 0.659470 1.886000 -0.148360 -0.256 -0.256 -0.394 -0.394 0.792 0.000 -0.336 -0.621 0.329 0.000 0.000 0.600 0.600 0.165 0.000 -0.246 0.000 0.000 0.000 0.147 0.147 0.622 -0.100 0.000 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.710 0.710 -0.906 -0.906 -1.042 0.974 -0.421 -0.421 0.000 0.000 -0.256 -0.256 -0.394 -0.394 0.792 0.000 -0.336 -0.621 0.329 0.000 0.000 0.600 0.600 0.165 0.000 -0.246 0.000 0.000 0.000 0.147 0.147 0.622 -0.100 0.000 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.710 0.710 -0.906 -0.906 -1.042 0.974 -0.421 -0.421 0.000 0.000 8.0612702 6.9598246 9.4595128 11.2474306 11.7541550 7.5149263 8.0657166 9.3061200 7.3367922 -0.2785836 11.0246304 11.6112134 2.3063789 NA 5.0433489 11.7651313 4.0433445 7.5093229 11.1260299 10.9770392 8.9811637 0.7214164 9.1137380 10.1062042 4.1137338 -0.2785836 NA 3.9693439 9.1201643 4.0433445 9.7603394 8.0612702 8.9811637 9.7888144 9.6972684 5.1808520 9.5543105 -0.2785836 7.6580586 12.7356153 9.2012006 10.2331731 NA 5.4218595 7.6814226 -0.2785836 8.1971538 NA 2.0433445 0.7285736 0.7214164 13.7889388 NA 16.0929589 11.2162761 9.8194525 7.4628875 11.8397127 10.9235442 10.1190951 -0.2785836 2.3063789 9.7058388 3.5287713 NA -0.2785836 5.3063826 10.525455 7.692964 8.950239 10.216276 9.530385 10.668327 6.911245 9.400901 8.113738 11.621533 12.240811 11.221764 9.347129 9.354416 2.306379 8.168504 10.858412 11.6268075 11.9893775 0.7214164 13.5912042 8.1726315 5.6283099 8.9740859 7.8351624 10.7176609 4.6756184 6.8088831 10.5431945 3.3063789 6.9210923 9.9430076 10.5117690 8.7383122 15.0479904 9.4879493 9.5076900 7.9740859 9.1664353 10.2400736 3.3063789 10.3311995 11.2027154 9.6447479 9.8875836 9.9645944 10.1581320 10.6573221 10.0021913 8.4729645 -0.2785836 9.6056062 8.9508160 10.2625170 NA 10.2062433 10.5392036 10.8186757 9.4270528 7.7326477 14.4644666 10.0365700 9.7603394 11.3026210 11.7069067 NA 2.5287713 10.0229166 9.2969598 9.7821164 TCGA-AC-A2QI 76 0 NA 588 breast stage iiia t3 n1a mx female 2011 NA yes infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 3 1 2 2 4 4 1 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-06 6.242351e-07 18.8405797101449 49.2753623188406 4.34782608695652 15.9420289855072 11.5942028985507 10.0535841 9.7715340 11.5949071 9.5442387 8.1531487 9.4232769 11.1904994 9.6346597 11.0811381 11.1236654 9.5132118 10.3112172 -0.6542630 13.6196985 2.9896477 10.3068815 7.7251720 8.2720895 8.0634700 12.9079764 -0.6542630 13.9807181 6.7928775 9.4044146 10.2394743 8.3792168 NA 10.6288560 9.4484255 3.8693582 8.5107005 7.2941612 NA 4.6677219 10.0057896 9.7604788 9.3479055 11.2732012 10.1446704 11.0927277 0.9307752 10.9593529 14.9405410 7.3255042 11.3752534 10.5479175 10.9733275 4.1271545 1.1531568 8.5031404 11.1753182 -1.6542630 10.7923600 5.3344789 6.1205800 5.4647336 10.4831050 11.5903061 10.6646188 11.8970212 12.5770148 8.3415606 10.5509760 10.7061524 11.3250402 10.9694465 3.8693582 11.3415608 11.7292279 -1.6542630 10.3450891 8.8859218 3.4349484 5.8133990 10.1487139 9.8902751 10.1778925 9.4802199 3.2999919 8.3344784 12.9449510 12.4624625 9.7699600 9.9833241 1.0369000 1.0369000 0.0129340 0.0129340 -0.2305500 0.0019418 0.0016642 0.0265140 -0.0131270 -0.0131270 -0.0131270 -0.2388700 -0.2388700 0.0065262 0.0065262 0.0065262 -0.5805800 0.0141900 0.0197830 0.0084743 0.0207630 -0.5853000 -0.0205490 -0.0205490 0.0000000 0.0000000 -0.0070576 -0.0050904 -0.0227440 -0.0227440 -0.0377620 0.0129340 -0.2295700 -0.2330000 -0.0087146 0.0116790 -0.6324400 0.0265140 0.0265140 0.0068044 0.0022193 -0.0131270 -0.2299400 -0.2299400 -0.2299400 -0.2299400 -0.2388700 -0.2388700 0.0065262 0.0065262 -0.5814700 0.0122370 -0.5805800 0.0141900 0.0141900 0.0197830 0.0084743 0.0084743 0.0114000 -0.6095000 -0.5853000 -0.0205490 0.0018030 0.0000000 -0.0070576 0.0143300 0.0425900 0.0169850 0.0169850 -0.239 -0.239 0.000 0.000 -0.581 0.000 0.000 0.000 0.000 0.020 -0.587 -0.565 0.000 0.000 0.000 0.000 0.000 0.000 1.037 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.233 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.230 -0.230 0.000 0.000 -0.239 -0.239 0.000 0.000 -0.581 0.000 0.000 0.000 0.000 0.020 -0.587 -0.565 0.000 0.000 0.000 0.000 0.000 0.000 1.037 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.233 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.230 -0.230 0.000 0.000 8.6654656 6.2406120 6.5889679 10.9937017 11.3065196 6.8091958 12.1166640 9.0777744 9.0057270 0.3457370 10.9871681 11.6543275 4.3457938 3.7720546 3.1006750 7.5182212 3.5937243 10.9380170 11.4302699 10.6694114 8.9705891 5.6311945 8.1643760 10.5469986 7.4199349 3.3457938 -0.6542630 -1.6542630 10.7052686 6.1271524 6.0600387 7.6654660 5.1659722 10.3399950 10.7167535 6.3344789 8.9494200 -1.6542630 7.3115776 12.6330731 8.2720895 8.8907580 NA 0.3457370 8.8486254 0.3457370 5.5937213 0.6677559 5.7970052 4.8651171 4.1271545 10.3881370 3.3457938 7.9531238 10.9236944 9.6934150 5.1786828 9.7557148 12.1622773 9.4530107 2.9896477 5.1139796 10.5622363 2.5937123 NA 1.5157125 2.7381193 12.313684 4.299992 8.377840 13.619698 10.315899 10.664054 12.907976 11.398531 9.143260 9.640414 13.346058 9.936848 8.503140 8.435906 NA 7.354222 11.478454 11.5107005 12.4255284 6.9568187 14.0771363 9.0703075 6.6450012 7.9715027 7.7230042 10.4810733 8.1255132 7.4464556 9.5132118 7.9769707 -0.0693005 10.7749388 6.1271524 5.5227149 11.0559543 10.2620463 10.6401271 8.3202080 9.0788089 11.2151947 6.0737131 10.1429039 9.3479055 10.5390109 10.1619773 10.7902909 10.8798533 10.1607765 10.2330142 8.3570210 1.6677105 9.4153171 6.3057955 11.1753182 6.4543174 10.7923600 6.4172568 10.6799048 10.4831050 7.2099797 13.4836653 10.0918880 10.0186609 13.2161583 11.1842097 3.8376506 1.5157125 10.0918880 10.1218153 9.2824315 TCGA-AC-A2QJ 48 1 446 NA breast stage iiib t4b n0 m0 female 2011 NA yes metaplastic carcinoma 0 white hispanic or latino NA NA 4 3 3 1 5 5 4 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 3.467973e-08 11.7647058823529 11.7647058823529 0 52.9411764705882 23.5294117647059 7.4655411 7.3508623 9.8594554 4.1388145 9.1282540 7.8649166 6.8318342 9.4030983 12.7995212 8.6047867 8.5561021 8.8036743 1.2319239 11.1810187 NA 14.1325054 5.8017769 6.7788157 5.2091999 3.1388145 NA 6.8466312 3.4798514 10.7864961 5.6913527 5.3193831 2.8168864 12.7491960 10.5817556 3.8168864 8.6790046 6.4018472 NA 4.1861202 8.8901329 8.1626587 8.0648117 7.0132814 7.0584702 8.0961079 1.5538520 3.4798514 14.7221457 3.3312179 10.7287754 8.8865575 7.5080459 3.5538520 NA 6.6497735 9.0505039 NA 10.0663926 5.9461671 6.7476210 6.6581858 8.1358032 11.0871794 10.4285237 11.2632782 10.7451557 10.2056189 9.6391893 9.2206061 8.6434327 9.7691400 -0.7680761 10.1259814 7.8972574 -0.7680761 10.9427280 8.8539735 1.5538520 4.1861202 8.6913530 8.1832061 10.4118306 7.9254085 0.8168864 8.4559231 12.0065027 11.9254085 9.2912660 9.9166703 0.264200 0.236590 0.298380 0.290340 0.152030 0.281840 -0.016292 -0.016292 -0.173860 -0.173860 1.789200 -0.272600 -0.272600 -0.054825 -0.054825 -0.054825 -0.102370 -0.121200 -0.218370 -0.109780 -0.160090 -0.384810 0.164000 0.164000 -0.060748 -0.060748 -0.060748 0.275050 0.396450 0.314020 -0.030813 0.363130 0.173320 0.145780 0.281690 0.252610 -0.016292 -0.016292 -0.016292 0.298510 0.283270 -0.173860 0.862150 -1.223700 -0.433820 -0.415970 -0.272600 -0.272600 -0.054825 -0.054825 -0.067556 -0.054825 -0.102370 -0.121200 -0.102890 -0.218370 -0.102770 -0.102770 -0.182570 0.026654 -0.396800 0.164000 -0.176890 -0.060748 -0.060748 0.275050 0.262470 0.356590 0.356590 -0.273 -0.273 0.000 0.000 -0.121 -0.121 -0.218 -0.110 -0.172 0.000 0.000 -0.385 -0.221 -0.177 -0.177 0.000 0.000 0.314 0.314 0.275 0.275 0.252 0.357 0.000 0.000 0.290 0.290 0.146 0.146 0.253 0.253 0.000 0.000 0.299 0.299 1.615 1.789 -0.416 -0.416 0.000 0.000 -0.273 -0.273 0.000 0.000 -0.121 -0.121 -0.218 -0.110 -0.172 0.000 0.000 -0.385 -0.221 -0.177 -0.177 0.000 0.000 0.314 0.314 0.275 0.275 0.252 0.357 0.000 0.000 0.290 0.290 0.146 0.146 0.253 0.253 0.000 0.000 0.299 0.299 1.615 1.789 -0.416 -0.416 0.000 0.000 8.3246788 -0.7680761 8.0552889 11.5869973 11.3037191 8.6074172 10.0945590 5.7239353 10.4356917 3.7554858 12.4550183 13.8412406 3.9868114 NA 0.8168864 7.5126923 6.3508632 12.0862056 11.1755353 8.4018467 8.6560880 0.8168864 7.3404457 10.6080470 7.0198242 6.9598420 3.1388145 2.0392788 8.2817701 1.5538520 7.8093501 9.4786622 6.8612780 11.1985388 8.4043493 2.2319239 10.5357023 NA 7.2262754 13.0870820 8.3140706 12.2468138 2.0392788 0.2319239 7.5938654 NA 5.9323612 NA 3.4018489 5.0648096 3.3193867 11.8171188 1.2319239 6.8972574 11.0723061 9.7778513 6.9323612 9.4571291 10.5004636 10.1977058 NA 5.5717708 9.6434325 3.8168864 NA 2.9323636 6.8972574 11.119961 7.831834 8.089903 11.181019 9.184663 10.917108 3.138814 6.809350 9.042493 9.184663 12.511967 12.629329 6.649774 9.921046 5.276314 6.517325 7.376580 10.2556759 12.2909280 3.8168864 13.3241006 8.3791266 5.3404448 6.8685460 7.2708410 7.8479556 7.8539732 6.7633027 8.5561021 5.4018455 1.8168864 8.0328216 8.6954458 8.3975570 10.2248599 9.8963689 9.2899133 7.3612043 11.4471512 3.9868114 4.0392788 9.7136604 8.0648117 10.6172448 10.6226280 7.4118304 10.6655070 9.5470711 10.1183802 5.3816675 NA 10.6681646 6.7710800 9.0505039 4.4413772 10.0663926 7.2319220 9.8594554 8.1358032 7.5583511 14.4591238 11.0548907 9.8972575 11.6631580 11.3682719 NA -0.7680761 8.1448107 8.2680951 8.3033840 TCGA-AC-A3BB 46 0 NA 987 breast stage iiia t3 n2a mx female 2011 NA yes infiltrating lobular carcinoma 5 black or african american not hispanic or latino NA NA 2 3 NA NA 4 4 4 3 6 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-06 5.548757e-07 13.0434782608696 44.9275362318841 7.2463768115942 23.1884057971014 11.5942028985507 9.1365939 9.0227393 11.3035263 8.1687062 8.5367100 9.5714419 10.4123291 9.5444232 10.9946068 11.7691613 10.7056973 10.3460723 1.9933121 12.8103102 2.7818213 10.6618893 7.4646323 8.2481406 8.7187702 12.4158693 0.1188913 13.2731482 6.2133745 9.8924253 10.1113238 6.8914471 -1.4659384 12.6595563 8.7000582 3.4407795 8.6567230 6.4287136 -1.4659384 4.3667838 9.6286325 9.6120458 9.3217976 11.7206283 9.0476226 10.5728140 5.7138030 10.5289554 14.6576931 7.3234610 10.1541148 10.7921666 10.1586905 5.4165391 6.8376759 8.4362701 12.1885310 NA 10.7933440 5.4764109 6.4467839 5.3667838 9.7711050 11.6053573 10.7720011 12.4954351 12.3993383 8.3234286 10.3000098 10.0222423 10.8027294 10.3246508 3.1777584 11.1976754 10.5918867 0.1188913 10.6407850 8.7603071 3.7054250 5.7237196 10.8172728 9.5638724 9.9278217 8.9747642 3.1777584 9.5486129 14.1872439 12.8708896 9.9612079 9.6187034 0.4164700 0.4077700 0.0169850 0.0200630 -0.1914900 0.0058309 -0.2131600 -0.3232900 -0.0041546 -0.0041546 -0.0041546 0.0093098 0.0066653 0.0072217 0.0072217 0.0058042 0.0088355 0.0101460 -0.1957500 0.0079175 -0.0056757 -0.2223100 -0.2223100 -0.2223100 0.0087528 0.0087528 0.0087528 -0.0022168 -0.2123100 -0.2123100 -0.0044312 0.0169850 -0.2051000 -0.1914900 0.0058309 0.0058309 -0.2131600 -0.3930100 -0.2201000 0.0077783 0.0077783 -0.0041546 0.0227250 0.0227250 0.0227250 0.0126550 0.0066653 0.0036542 0.0072217 0.0072217 0.0058042 0.0058042 0.0088355 0.0025192 0.0066653 -0.1957500 0.0079175 0.0079175 -0.0056757 -0.4407000 -0.2223100 -0.2223100 -0.4221100 0.0087528 0.0087528 -0.0022168 0.0291840 -0.4292000 -0.4292000 0.000 0.000 0.000 0.000 0.000 0.000 -0.196 0.000 0.000 0.223 0.223 -0.222 -0.222 -0.422 -0.422 0.000 0.000 -0.212 -0.212 0.000 0.000 0.000 -0.429 0.000 0.000 0.000 0.000 -0.191 -0.191 0.000 0.000 -0.323 -0.323 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.196 0.000 0.000 0.223 0.223 -0.222 -0.222 -0.422 -0.422 0.000 0.000 -0.212 -0.212 0.000 0.000 0.000 -0.429 0.000 0.000 0.000 0.000 -0.191 -0.191 0.000 0.000 -0.323 -0.323 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8273665 2.6213603 6.5782897 11.3220015 11.3438640 7.8250198 11.1916600 9.0193419 9.7044084 4.5782866 11.6398035 11.7122937 3.8193003 3.3918777 2.3412457 7.7675144 4.1188580 11.3825179 11.3534754 10.3576603 9.2098520 4.3667838 7.8958388 10.3468745 8.4924477 8.6528360 3.4407795 -1.4659384 10.9588485 6.4347616 6.8513080 7.8936443 8.9601598 11.2974746 9.7069475 4.9089330 9.2795693 NA 8.0297499 12.6102095 8.7025672 8.9912758 NA -1.4659384 8.1319475 5.1338060 4.9432837 NA 7.3793853 5.2785944 5.5451220 10.7545756 0.1188913 8.5507033 10.3738860 9.7847855 6.2820876 10.6826893 12.5000399 9.4065698 4.4880908 5.6319279 9.8687269 1.5339121 NA 0.1188913 3.6631738 11.9659018 4.7038205 8.3730987 12.8103102 10.2063203 10.6676794 12.4158693 11.5056182 9.2854390 10.2472815 13.0520563 11.7119373 8.4362701 8.9401001 0.8558303 6.6734462 10.7569917 11.4751260 12.4280496 6.9851065 13.2136500 8.8204528 7.9809781 8.6721668 7.3667847 10.3669352 8.5810190 8.9304996 10.7056973 8.2820876 4.4165358 10.3436631 4.9432837 6.7894424 10.1028011 10.7378547 10.2677577 7.7794475 9.2273820 9.5183134 7.7912827 11.3507287 9.3217976 10.8493276 10.2032229 10.3727050 10.1929989 10.1018511 10.4738414 8.2635157 0.8558303 10.0726078 7.1113235 12.1885310 8.3037328 10.7933440 7.2652137 10.9283577 9.7711050 6.5168882 14.1122382 10.0247459 10.5079510 12.6196164 11.3809523 5.6937657 2.3958580 9.5945909 9.7075721 9.0106411 TCGA-AC-A3EH 79 1 197 NA breast stage iiic t3 n3 m0 female 2011 NA no infiltrating lobular carcinoma 12 white not hispanic or latino NA NA 5 2 NA NA 2 2 6 5 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 3.467973e-07 25.5813953488372 13.953488372093 2.32558139534884 32.5581395348837 25.5813953488372 8.7124878 9.1143936 12.1248117 7.9078040 8.2168045 8.2499331 11.0174414 9.0999303 11.7129334 8.9963656 10.9855882 10.3147755 5.7978508 14.1194160 1.2742915 9.0779599 7.8549525 7.2998253 8.2950714 12.7635646 1.2742915 14.2180083 4.2218230 9.3380702 11.1415688 5.3495776 0.0518593 12.5415775 9.5092784 1.7888527 8.4906893 6.0962914 -0.5330336 2.4669403 10.2071375 10.1318267 8.9015632 11.2168045 10.2007978 11.0253558 2.2742915 10.9240594 15.5225988 6.1828293 11.2654048 10.1260391 11.2402804 4.8932020 -1.5332424 8.0310847 11.1293809 -1.5332424 8.8624691 4.3738291 3.6763915 5.2482957 10.5434167 11.5638149 10.8837326 11.4797342 12.5104751 8.2318068 9.8511792 9.6020030 10.9784407 9.6715062 4.9426693 11.9107852 11.8138643 -1.5332424 10.8062283 9.1534355 3.5607516 4.8067829 10.5783968 9.8294269 9.9036466 9.2058717 1.0519289 10.2147085 12.7269725 12.3568193 10.6659939 9.7752741 1.16990000 1.17600000 0.01335800 -0.00774820 -0.41784000 -0.00180140 0.00000000 0.00000000 0.81318000 0.81318000 0.78910000 0.42587000 -0.41410000 0.00999500 0.01153900 0.01153900 0.00235810 -0.01519100 0.00013863 -0.40285000 0.04032600 0.03171800 0.03171800 0.03171800 0.03622900 0.03622900 0.03622900 0.02651400 -1.27930000 -0.41036000 0.07282700 0.02693500 -0.41784000 -0.41784000 -0.00180140 -0.01064600 0.00000000 0.00000000 0.00000000 0.06651500 -0.00292560 0.81318000 0.02104300 0.02104300 0.02104300 0.07455200 -0.41410000 0.02890300 0.00527490 0.01153900 -0.00013862 -0.00013862 0.00235810 -0.00609040 -0.82806000 0.00013863 -0.40285000 -0.40285000 0.03199900 -0.81942000 -0.81589000 0.03171800 -0.82529000 0.03622900 0.03622900 0.02651400 0.02174400 0.05879500 0.05879500 -0.414 -0.414 0.000 0.000 0.000 0.000 0.000 -0.403 0.000 0.000 -0.819 -0.816 0.000 -0.825 -0.825 0.000 0.000 -0.395 0.774 0.000 0.000 0.000 0.000 -0.423 -0.423 0.000 0.000 -0.418 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.813 0.813 0.000 0.000 0.000 0.000 -0.414 -0.414 0.000 0.000 0.000 0.000 0.000 -0.403 0.000 0.000 -0.819 -0.816 0.000 -0.825 -0.825 0.000 0.000 -0.395 0.774 0.000 0.000 0.000 0.000 -0.423 -0.423 0.000 0.000 -0.418 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.813 0.813 0.000 0.000 0.000 0.000 8.5357132 5.3249150 5.8506394 11.1139437 11.8607277 7.6665585 11.9446934 8.0240160 9.5927037 0.0518593 12.1422306 11.2490283 2.2742915 -0.5330336 3.1673740 7.2934836 3.1673740 8.8678146 11.7400021 10.8611298 9.3396100 3.8931972 7.5003583 10.7606941 6.2151272 4.8592540 0.0518593 -1.5332424 10.2787111 4.6166812 5.9826354 7.9767102 5.2218230 11.0447557 10.5113292 4.0518941 9.1331592 -0.5330336 6.4556198 12.5527395 7.5003583 8.0176820 NA -0.5330336 8.5910563 1.0519289 5.1251469 NA 3.0518941 5.5330244 1.4669142 10.5810027 -1.5332424 6.9345401 10.2176421 9.7638512 3.4669403 9.0099669 11.5120121 7.8994772 2.2742915 3.5543924 9.3495780 1.9263790 NA -1.5332424 1.4669142 12.220093 5.208400 8.059392 14.119416 10.062659 10.872343 12.763565 11.817322 9.485135 10.335372 12.933904 10.118435 8.031085 9.053775 1.051929 6.893200 11.270663 11.845365 12.286016 6.331121 13.735951 8.253205 5.397673 8.796731 7.982635 10.688649 6.775274 5.421132 10.985588 7.364781 1.274291 10.023441 6.349578 6.458797 11.143333 10.453488 10.180751 8.208402 9.908323 10.984112 3.636857 9.865492 8.901563 10.437401 10.671506 10.840616 9.535713 8.008032 10.635294 9.175157 1.926379 9.949415 5.585876 11.129381 2.714861 8.862469 6.538397 11.284718 10.543417 6.355679 12.997829 8.638112 10.322582 13.298638 11.858447 -1.533242 -1.533242 9.731964 9.640612 9.225991 TCGA-AC-A3HN 87 0 NA 496 breast stage iib t2 n1a mx female 2011 NA no infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 3 5 4 3 4 3 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.733986e-07 26.6666666666667 13.3333333333333 0 26.6666666666667 33.3333333333333 10.5868081 10.1343999 11.4066722 9.8110346 8.3253540 8.7430541 10.8438601 9.7211641 10.6113027 9.8992187 11.1243935 10.3362689 5.6064363 13.2422384 3.4326120 10.3788362 6.9939189 8.5749015 9.7107736 12.9253888 0.8824474 13.6642677 7.7171075 9.7374747 9.9542558 7.1438342 -0.3398928 12.1002366 9.1598638 3.6296480 9.3347986 7.1465178 -1.9246727 5.6219493 9.9075499 10.1611917 10.2062693 11.2003075 10.0873308 11.4979087 0.6600159 9.6842342 14.7749532 8.8478895 9.8127254 11.7908030 11.1022703 5.5749008 5.3324430 9.0771671 12.3969131 -1.9246727 10.9967105 5.6296451 6.9909344 5.8232475 10.3394981 11.5191644 10.6351495 12.0538553 12.7915534 8.3662260 10.7089588 10.6589585 11.0785733 11.3724017 4.7615566 11.1418174 9.1015789 NA 10.4746004 8.9142592 3.9099651 5.8029764 10.5439340 10.0226924 10.2314546 9.5185170 3.4673708 9.9890668 13.8481174 12.2868677 10.0343329 9.7184608 0.40744000 0.40333000 -0.00912860 -0.00912860 -0.01523000 0.43277000 -0.00995650 -0.00995650 -0.00799620 -0.00799620 -0.00478960 0.00708260 0.00708260 0.00000000 0.56632000 -0.42237000 0.00041593 0.00041593 -0.00401620 0.00263570 0.01572700 0.02231100 0.01997800 0.01997800 0.03552400 0.03073200 0.03073200 0.02862200 0.03764100 -0.00758870 -0.00387790 -0.00912860 0.03298600 -0.01523000 0.32527000 0.36166000 -0.00995650 -0.00995650 -0.00995650 0.02048300 -0.00980000 -0.00178000 0.00305220 0.00305220 0.00305220 0.00305220 0.00708260 0.00708260 0.00000000 -0.40639000 -0.42237000 -0.42237000 0.00041593 0.00041593 0.00041593 -0.00567570 0.00263570 0.00263570 0.01572700 -0.42484000 0.03608800 0.01997800 -0.00337940 0.03552400 0.03073200 0.01081900 0.00791750 -0.39797000 -0.39419000 0.000 0.000 0.000 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.402 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.362 0.362 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.402 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.362 0.362 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.54774632 NA 6.79615515 11.32772087 11.29815217 7.29941868 11.92299367 9.50049695 9.02619448 6.59075470 11.57265784 11.57512798 3.39698146 3.20434421 4.61421512 8.41935138 4.28450673 10.87575319 10.94329927 10.75651354 8.95387283 5.58285101 8.23113860 10.50158235 7.70258967 7.43260787 1.53450988 NA 10.98307269 7.31345992 7.23492662 7.80467637 7.34418226 11.12018881 10.45632803 4.26488168 8.98419855 0.07505336 8.11260266 12.34979758 8.91976136 8.57788725 -1.92467275 3.53448498 8.24998094 1.39698146 4.89523475 0.39703624 5.92680359 5.69644737 4.05233764 10.50655305 0.88244742 9.12762348 10.29422395 9.55180168 6.84984293 10.37855085 12.38694566 9.35930131 3.53448498 4.76155655 10.67659411 3.62964804 -1.92467275 NA 2.59862723 13.3150757 5.6219493 8.3947276 13.2422384 10.5499528 10.4939622 12.9253888 11.9543515 8.6494599 10.6842342 13.1354559 10.0701160 9.0771671 8.9039851 0.6600159 7.2990569 10.5401117 11.457544 11.957890 7.708051 13.677665 8.693441 6.872717 9.078573 8.412677 10.405112 8.037952 7.990935 11.124394 7.146518 4.075053 10.962086 5.754535 7.418596 11.427927 10.606924 10.666578 7.648703 9.168473 11.837749 7.536535 11.469108 10.206269 10.505769 9.491325 11.343451 10.935754 9.788012 10.760023 8.642061 NA 9.658735 8.601574 12.396913 7.582850 10.996710 6.888837 10.712738 10.339498 7.227341 13.718151 10.124904 10.005054 12.783062 10.695275 4.945420 1.245009 10.369102 10.180309 9.929145 TCGA-AC-A3OD 68 0 NA 451 breast stage iib t2 n1mi mx female 2011 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 5 NA NA 3 4 4 3 6 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6.242351e-07 6.935946e-08 15 20 0 50 15 10.8374434 9.9227243 11.2891546 9.8073214 8.5080832 9.1331738 9.6716527 9.6509813 9.5417725 10.8219031 11.5600480 10.5039156 3.2329523 12.9754200 3.9262841 9.7038461 7.3365717 8.6216080 9.2415568 12.8463666 -0.3215675 12.8620734 8.1275090 9.3371656 10.8890318 5.3926059 NA 10.9553688 9.6989932 3.2930761 8.5363416 7.5822421 -2.3219281 4.3648595 10.2661380 10.3020134 9.3289634 10.8040968 10.1601598 11.2726851 5.7605084 12.4188264 14.5241200 8.7068883 9.8978315 11.0866902 10.8815555 4.6895899 4.1540971 9.9170638 12.1270576 NA 10.8353915 5.8179123 7.7035001 6.5144111 10.4486114 12.2382752 10.5606214 11.7686383 13.0267429 9.1213040 10.9227243 10.6183785 11.4242448 10.8941968 5.3857209 12.0554354 11.5873159 -1.3215675 10.1095969 8.9131778 4.7276646 6.5363420 9.2223590 11.0002886 10.3260437 9.9056755 2.8878177 10.2343874 13.2866731 12.3548685 9.8018352 9.6923810 0.3595300 1.0314000 -0.4081100 0.7372000 -0.0053992 0.0027745 0.0000000 -0.0099565 0.0133530 0.0133530 0.0024969 0.0108420 0.0108420 0.0066653 1.7892000 1.1091000 -0.0018014 -0.0018014 0.3588800 0.0087528 -0.3853700 -0.3900700 0.0127950 0.0127950 0.6965200 0.0127950 0.0127950 0.0220240 -0.3735800 -0.3869400 -0.0030475 -0.3959700 0.0068044 0.0122370 0.0027745 -0.4090400 0.0000000 -0.0099565 -0.4032900 0.0026357 0.0000000 0.0133530 0.0133530 0.0133530 0.0047034 0.0185230 0.0108420 0.0108420 0.0104240 0.0066653 -0.3985300 -0.4011200 -0.0018014 -0.0018014 -0.0018014 0.0020805 -0.0227440 -0.0227440 -0.3853700 -0.3839200 -0.3900700 0.0127950 0.0114000 -0.4227600 0.0127950 0.4051100 0.0019418 0.0260920 0.0260920 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 0.000 -0.384 -0.390 0.000 0.000 0.000 0.390 0.390 0.000 0.350 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 -0.035 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.279 0.097 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 0.000 -0.384 -0.390 0.000 0.000 0.000 0.390 0.390 0.000 0.350 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 -0.035 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.279 0.097 7.3701041089 3.0002885102 4.4465473867 11.0038064925 11.0204351111 7.3845454753 11.2760639039 9.3205160426 8.2383111044 4.5852510109 12.3578955385 11.3530427006 3.7444517586 3.7868890529 4.8878128063 8.0070356791 4.5731806028 10.1282828311 11.6128806579 10.4903371698 9.4893335951 4.5972212684 8.0717508727 10.3818315695 8.2670750509 7.4062806997 0.0002885102 -0.7367251650 10.5921848244 6.2819875019 6.7711170278 9.3917468873 7.7268475617 11.5106443174 10.3685767393 4.7551760123 9.0348124405 2.8878176793 8.5464114234 12.9051113209 9.9128785609 7.4905380417 -0.3215674662 7.9392800665 8.6677548442 3.3788029073 4.0182068567 2.4857101859 7.2967455505 6.9413246711 4.9544848205 10.4122231561 -0.3215674662 8.9369264492 10.5598568574 9.8021586358 5.6895871116 10.2124201447 13.6499713852 10.0975306066 5.3648595421 4.5487263677 12.6134334192 -0.3215674662 -2.3219280949 -1.3215674662 1.1377658081 14.807145 5.717279 8.180198 12.975420 10.843902 10.946902 12.846367 9.978141 10.100720 11.055435 12.883352 11.084300 9.917064 9.519925 NA 7.300412 10.867876 11.383777 12.026535 8.694472 13.101310 8.058821 7.931026 8.971257 8.528547 10.296124 8.417297 6.681175 11.560048 7.148003 6.554877 11.140224 8.078173 7.237891 10.768307 10.939574 10.762338 7.364861 8.631102 12.360367 7.594239 11.810753 9.328963 10.430323 10.343696 10.687839 10.099899 10.205349 10.825565 8.267075 2.963770 9.645551 7.983282 12.127058 6.956809 10.835392 5.935747 11.403514 10.448611 7.231202 13.728209 9.599830 9.947487 12.619683 10.363109 5.931026 2.340562 9.945732 9.867258 10.050681 TCGA-AC-A3QP 79 0 NA 675 breast stage iib t2 n1mi mx female 2011 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 5 4 3 3 3 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.080784e-07 14.8148148148148 11.1111111111111 3.7037037037037 37.037037037037 33.3333333333333 9.735561 8.573536 10.687231 6.340007 9.015098 8.727130 9.698886 9.465396 11.242581 9.092876 11.274309 9.787636 3.135650 13.291731 2.419431 11.250296 6.166675 8.191402 9.921562 11.751797 1.612069 13.950126 5.906708 10.436635 9.771957 5.380269 NA 10.461714 9.103939 2.312520 8.255942 6.751638 -1.387978 4.393444 8.600771 9.755469 9.376128 10.952493 9.112928 10.108441 4.860014 11.187389 14.358469 5.431626 9.902681 9.886464 9.882965 4.444978 4.226794 7.918148 10.860607 NA 10.503490 5.038353 5.951935 5.419441 10.042016 11.640856 10.997140 12.235053 11.966886 8.085792 10.596148 10.237338 10.169071 9.963025 4.312527 11.083253 9.580753 1.934026 10.404876 9.132705 3.007142 5.444975 10.764054 9.540604 9.810531 9.301210 3.419445 8.189515 13.129133 13.006549 8.997948 9.752277 3.1910e-03 3.1910e-03 -5.3992e-03 -5.3992e-03 -6.6432e-03 4.3021e-03 -3.1859e-03 -3.1859e-03 7.9374e-01 7.9374e-01 7.9762e-01 0.0000e+00 0.0000e+00 -2.7479e-05 -2.7479e-05 -2.7479e-05 1.3863e-04 1.3863e-04 -2.6322e-03 4.4411e-03 3.6076e-03 1.2237e-02 1.2237e-02 1.2237e-02 1.8943e-02 1.8943e-02 1.8943e-02 2.4969e-03 3.1910e-03 3.1910e-03 -3.3243e-03 -5.3992e-03 -6.6432e-03 -6.6432e-03 7.5966e-04 7.5966e-04 -3.1859e-03 -3.1859e-03 -8.9243e-03 1.2934e-02 -2.8906e-03 -4.5768e-01 5.8309e-03 5.8309e-03 5.8309e-03 5.8309e-03 0.0000e+00 0.0000e+00 1.4749e-02 -2.7479e-05 3.6076e-03 3.6076e-03 1.3863e-04 1.3863e-04 1.3863e-04 -2.6322e-03 4.4411e-03 4.4411e-03 3.6076e-03 -4.4102e-01 1.2237e-02 1.2237e-02 6.3871e-03 1.8943e-02 1.8943e-02 2.4969e-03 6.9435e-03 3.6887e-01 -3.8649e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.363 -0.441 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.386 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.363 -0.441 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.386 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2487106 NA 5.6781762 11.4690951 11.6522045 8.1301885 10.9494292 5.5322608 9.8012558 4.2267936 12.4580661 11.3613878 3.5662794 NA 1.7820311 7.6700776 4.2845141 10.1809922 10.9345776 9.4322650 9.5821920 3.3669796 8.1609081 10.6268040 6.9112937 6.4258671 -0.3879778 -1.3879778 10.8306493 4.0383484 7.2595446 8.0467142 7.2119992 11.2553741 9.0918664 7.2194164 9.3417067 NA 7.7179944 12.9860387 8.3038296 9.1346676 1.9340258 4.3400067 8.1838388 3.8600093 6.0959012 -1.3879778 5.4194411 5.3128031 5.1970476 11.0089584 -0.3879778 8.0735653 10.6461972 9.6781753 7.8481002 9.5575299 11.0137656 9.6071465 2.9340069 4.1039424 10.6875653 1.9340258 -0.3879778 1.6120694 2.6995516 12.309124 3.934016 8.649633 13.291731 10.246897 10.562277 11.751797 10.917008 9.229195 9.916437 12.718731 12.086679 7.918148 8.488603 1.419431 7.694235 9.545777 10.7941700 12.1025609 5.6889021 13.0956462 8.9215625 5.6995489 8.7140617 7.4322654 10.0915026 8.2138571 7.8741810 11.2743094 7.6889014 3.0044115 9.7245256 7.3802706 5.4464945 10.3472190 10.1468753 10.0519169 8.5738108 10.1454158 6.3736378 6.4886034 10.7060549 9.3761282 10.7857632 10.2482575 10.3543955 9.6399920 9.8712409 10.0150980 6.9340140 NA 9.7874235 6.6727817 10.8606067 7.2304720 10.5034901 6.0715181 10.8483993 10.0420158 6.7310271 15.2498713 10.7713267 10.6700778 12.5125756 11.2180285 4.8019088 0.6121166 9.1069416 9.3636302 9.3220316 TCGA-AC-A3QQ 53 0 NA 734 breast stage ia t1c n0 (i-) mx female 2011 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 4 4 4 3 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.433109263 7.686395473 9.898772929 4.640256507 9.535556500 8.054389424 8.566253489 8.819764926 10.984727402 11.179412767 11.831658690 9.123102275 4.125684160 17.512259306 1.581351247 9.967941376 7.675878018 7.267860667 8.829287641 12.408702973 NA 14.051807311 5.535555333 10.640803917 9.481220623 2.455833513 -1.003466630 12.402602758 9.574770424 -0.003611254 8.123102275 5.455830226 NA 3.519956991 8.158788910 9.264354863 8.166322787 8.670590043 8.196069946 9.453778678 3.166329818 10.661733659 14.016639847 5.290649254 10.804557554 8.838748228 9.759610101 6.455828583 NA 6.938912659 9.123102275 NA 10.177549973 4.125684160 4.244323872 5.281798382 8.843455044 11.579950678 11.036344940 11.193614433 11.172882623 9.388715209 10.237785131 10.176306814 9.258492543 9.234802585 -1.003466630 10.711072567 10.735334483 NA 9.972245763 7.764582359 4.852388432 2.455833513 10.274847171 8.571936902 9.837962158 7.982239527 0.581399457 10.070539198 12.355186306 11.961280092 9.441412515 10.020844827 1.23130000 1.57070000 -0.00193990 -0.00193990 -0.00360110 -0.00055444 0.02104300 0.02104300 0.00388540 0.00388540 0.00388540 0.00000000 0.00000000 0.16070000 3.06270000 -0.71042000 -0.00304750 0.00374650 -0.02438800 -0.02763700 0.00110930 -0.71060000 3.65690000 0.15920000 -0.01684100 -0.01684100 -0.01684100 0.47495000 -0.71114000 -0.00622860 0.00791750 -0.00193990 -0.00360110 -0.00360110 -0.00055444 -0.00055444 0.02104300 0.02104300 0.01883100 -0.01230000 -0.00484610 0.00388540 -0.04373700 -0.04373700 -0.04373700 -0.04373700 0.00000000 0.00000000 0.17950000 -0.03155600 -0.71042000 -0.71042000 -0.00304750 0.00374650 0.00374650 -0.02397700 -0.02763700 -0.01972600 0.00110930 -0.62998000 -0.71060000 0.15920000 0.01824300 0.62424000 -0.01684100 0.47495000 0.00180300 -0.00830050 0.02300500 0.000 0.000 0.057 -0.710 0.000 0.000 0.000 0.000 0.000 0.683 -0.699 -0.551 0.159 0.000 0.000 0.000 0.000 1.244 1.244 0.475 0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.057 -0.710 0.000 0.000 0.000 0.000 0.000 0.683 -0.699 -0.551 0.159 0.000 0.000 0.000 0.000 1.244 1.244 0.475 0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.194842773 -1.003466630 5.581360287 11.860003314 12.051849683 9.144556537 11.742702144 NA 10.140080755 3.388713056 11.662843695 12.086369533 7.166322787 2.696839590 0.996388746 6.790813734 4.611107445 10.248471862 11.175062645 9.924175767 9.800528827 3.083860095 6.938912659 10.675877841 6.921210178 7.013206527 2.318316841 NA 9.642956389 5.996397786 6.156269186 7.618449376 6.225217079 11.761615471 9.935242266 2.166329818 10.632115866 NA 5.790813734 12.685412931 8.340693555 9.511111797 NA -0.003611254 8.585112398 1.318345767 5.300178648 0.581399457 4.205853839 7.410025582 3.244323872 10.844629431 2.581351247 7.073212914 10.727716796 9.623931590 5.040791631 9.053035560 10.936711397 8.506172679 2.318316841 4.854379716 11.887991611 1.318345767 -1.003466630 -0.003611254 3.083860095 14.784689 6.205852 7.845021 17.512259 10.027754 11.475167 12.408703 10.547145 8.356147 9.636643 12.826913 10.754204 6.938913 10.539913 4.205854 7.002023 9.713217 10.3643585 12.4368777 5.3183241 13.2320351 8.8197649 5.3001786 8.6221067 8.6546092 8.8485528 7.8851411 8.9665037 11.8316587 8.9751082 1.9963887 8.4701036 9.8980189 6.9366815 8.7260185 9.8141809 10.0917948 7.9793915 11.0931129 4.2058538 5.2631847 11.3176946 8.1663228 10.6366427 10.7765274 9.3126792 9.2336077 8.5160341 10.2672771 4.3183241 0.5813995 8.4322972 5.1663218 9.1231023 6.8356020 10.1775500 5.5199601 10.3972772 8.8434550 7.7311072 14.1955716 10.0442033 9.0838606 11.9249161 11.8853312 5.3362477 3.1663298 8.6635094 8.7479419 8.6293931 TCGA-AC-A3TM 50 0 NA 762 breast stage iiia t3 n1mi m0 female 2011 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 5 2 2 4 4 4 3 6 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 33.3333333333333 25.9259259259259 0 18.5185185185185 22.2222222222222 8.6567927 7.8465949 10.7226155 5.0702047 8.4287094 8.3283585 9.4410118 8.8003324 11.1125314 9.9744953 10.9922886 9.5198572 2.0306892 13.2923814 1.6681191 10.6896830 8.1983753 9.7023175 7.7403367 11.9463916 2.1826923 13.8115369 6.5260892 10.8892670 9.8515662 7.3283590 0.8607642 10.5387898 9.6081069 1.4457267 7.8061971 5.2530703 NA 3.3843123 8.0105001 9.3705281 9.6231353 10.3803894 8.3566082 9.1098667 6.1086813 11.2815029 13.6987260 5.0645423 10.1832447 9.4662327 8.4919300 5.0105024 6.1086813 6.7187342 10.2812398 -1.1392358 10.8719804 3.9051487 4.5046077 4.2183085 8.6355404 11.8733777 10.9999848 12.2385060 11.3513534 9.7743906 10.2546799 10.1257822 9.7241651 9.6106226 1.1826923 11.2072669 10.8441031 NA 10.1110517 7.9187452 3.3843123 1.6681191 11.4518080 9.1380406 9.4315576 8.0530462 3.6156399 10.8723299 12.8680433 12.1759027 9.9315449 9.7494964 0.95291000 0.98067000 0.00449080 -0.00161320 0.00074294 -0.01583000 0.00351850 -0.45197000 0.01061400 0.01061400 0.01061400 0.00324080 0.00324080 -0.00050480 -0.00050480 -0.00050480 0.00880260 0.00880260 0.01927300 0.00088162 0.00574170 -0.44109000 0.04519100 0.86997000 0.00240780 0.00240780 0.00240780 0.00365740 0.02053300 0.00000000 0.00588070 0.00449080 0.00074294 -0.00350820 -0.01583000 -0.01583000 0.00351850 -0.45197000 -0.45197000 -0.00479660 0.00088162 0.01061400 -0.00189030 -0.00189030 -0.00189030 0.00316340 0.00324080 0.00324080 0.00046560 -0.00050480 -0.00050480 -0.00050480 0.00880260 0.00880260 -0.01122900 -0.00488670 0.00088162 0.00088162 0.00574170 -0.63004000 -0.01651700 -0.00022759 0.00560270 0.00240780 0.00240780 0.00727160 -0.00880320 -0.40148000 -0.40148000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.240 -0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.973 0.000 0.000 0.000 -0.401 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.435 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.240 -0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.973 0.000 0.000 0.000 -0.401 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.435 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.4239496 6.4606656 6.0991584 11.8640954 12.3208251 8.9182711 11.5240889 3.8817919 10.2398120 3.1826764 11.8245524 11.6104886 2.6681191 1.1826923 1.6681191 7.7372703 4.3843123 10.7449237 10.9442325 9.7638819 9.8934877 3.6156399 7.7280321 10.8691818 6.8719804 5.5331771 3.1826764 NA 9.1204963 4.5611917 5.9796938 8.4287094 7.9561502 11.7087109 9.8164031 0.4457267 10.3364866 -0.1392358 6.3119644 12.7576532 8.6089460 8.6072674 NA -1.1392358 8.4754631 0.8607642 5.5749976 -0.1392358 5.3999128 5.5611917 4.5611917 11.3405335 0.4457267 6.8322964 10.8522750 9.6264537 4.3526032 9.2912057 10.8907305 7.8294202 1.6681191 5.5886727 11.0952713 2.0306892 NA 2.7676336 2.4457267 13.294032 7.060426 8.072641 13.292381 10.186059 11.450404 11.946392 11.141234 9.154547 9.689683 13.015571 11.210587 6.718734 10.710549 4.287022 8.153075 8.967970 10.500094 12.250653 5.518963 12.993969 8.922799 5.990036 8.761620 8.077499 9.327972 7.122848 8.084755 10.992289 8.374481 1.668119 9.327340 8.526089 7.281134 9.892110 9.733428 9.359602 7.571559 11.218305 4.718734 5.253070 12.133078 9.623135 10.587397 10.623135 9.203939 9.775886 9.476383 10.207267 6.270144 NA 9.920375 5.706243 10.281240 5.883120 10.871980 5.430610 11.007322 8.635540 7.706243 14.703153 10.862513 9.916713 12.039262 11.555111 3.668108 NA 9.240132 8.740336 9.068988 TCGA-AC-A3TN 75 0 NA 456 breast stage iib t3 n0 mx female 2012 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 1 4 3 4 1 3 3 3 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352509e-06 5.895554e-07 21.3114754098361 6.55737704918033 9.83606557377049 24.5901639344262 37.7049180327869 9.3194917 7.9835261 11.1249102 5.8976640 8.9412343 8.9100877 10.8383342 8.9324035 11.0564574 8.4318394 11.4733352 9.9412341 3.9067078 13.7978864 2.4916735 10.0063210 5.4674262 7.7396004 7.8953947 12.9048070 NA 14.4425688 6.4239865 9.7755821 10.0841298 6.0846277 NA 10.8509831 9.0786376 0.5847701 7.8255732 4.3921388 NA 2.7547165 8.9078371 9.1744334 10.2077492 10.8051605 9.0214936 10.0052687 2.4916735 11.1577192 13.9385148 6.2463473 10.3554460 9.3194917 9.9268568 3.5847822 6.5904074 7.1659823 10.5088524 NA 10.4972973 6.3595686 3.9770967 3.3921388 9.0431889 11.6833078 10.7792312 12.5015947 11.9240755 9.1451149 10.2155044 10.1263629 10.3583335 10.0655723 2.2852246 11.2474506 8.3092958 -1.4150375 10.1772393 8.1258789 2.5528689 3.0442192 9.8568287 8.9587348 9.8643928 8.1902617 2.7547165 10.3459178 11.6998258 12.2931117 9.7281654 9.7578347 0.73019000 0.73019000 -0.00498440 -0.00498440 -0.00802440 -0.00166290 -0.00387790 -0.00387790 -0.76877000 -0.76877000 0.00055459 0.01400000 0.01400000 0.00819590 0.00819590 0.00819590 0.00124810 0.00124810 -0.00277070 0.00805670 0.02960600 -0.76072000 0.02160300 0.01765200 0.03481800 0.03481800 0.02022100 0.03495900 0.00485790 0.00485790 -0.00512270 -0.00498440 -0.00802440 -0.00802440 -0.00166290 -0.00166290 -0.00387790 -0.00387790 -0.00387790 0.00000000 0.00000000 -0.78572000 0.00972760 0.01894300 0.01894300 0.01894300 0.01400000 0.01400000 0.00819590 0.00819590 0.00819590 0.00819590 0.00124810 0.00124810 0.00124810 -0.00277070 0.00805670 0.00805670 0.02020300 -0.78833000 -0.76072000 0.02160300 0.02525000 0.03481800 0.02022100 0.03495900 0.01307400 0.04854600 0.04854600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 -0.761 0.000 0.000 0.000 0.000 0.000 0.000 0.725 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.769 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 -0.761 0.000 0.000 0.000 0.000 0.000 0.000 0.725 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.769 0.000 0.000 0.000 0.000 0.000 9.1650406 NA 6.6182049 11.8031941 11.4660874 8.9102002 11.9212887 2.6044747 10.7553019 0.9067367 12.4746663 11.5118379 4.0110483 2.2852246 1.3921525 7.0605154 3.5389726 10.5272967 11.2396419 10.0985098 9.5265634 9.7357987 7.8585778 10.7865998 6.2782692 6.8885631 0.9067367 NA 9.6847874 6.6722457 6.2068346 7.8063692 7.9224042 12.0069284 9.7978863 2.5847942 9.3848731 NA 6.8087840 12.8226643 9.7948447 9.1432028 NA 5.9856621 8.3743157 6.3262497 6.5036461 0.1697968 3.6291817 6.7846021 0.9067367 10.2349364 -1.4150375 5.8976640 10.7761499 9.4901692 4.9598211 10.3063086 10.6458158 6.7395997 2.8327078 3.4427578 11.9335103 3.4916735 NA -0.4152299 2.1697326 13.7931690 5.2286379 8.5462320 13.7978864 10.1541632 10.8315228 12.9048070 12.4275254 8.9630770 9.6959178 12.4665653 9.4589951 7.1659823 10.0068470 0.5847701 8.0068467 9.7856808 10.7392838 12.3476832 5.4302719 13.6114266 8.7783075 5.0442149 8.6209558 7.6209558 9.8162194 6.2358343 7.7597078 11.4733352 8.2747802 1.5847701 9.9581912 7.0442138 5.8602552 8.3245627 9.6078435 10.0696051 8.9078371 9.9957635 5.7646912 2.7547165 11.8394492 10.2077492 10.5634926 10.3092960 10.5099657 8.7721344 7.5988029 10.1355290 6.5620623 -0.4152299 10.0571379 6.0442149 10.5088524 2.5847942 10.4972973 5.9684871 11.1137246 9.0431889 6.4239865 14.2112042 10.6785298 10.4578417 12.4615869 10.8922676 0.1697968 -0.4152299 9.2358338 9.2589744 9.5243613 TCGA-AC-A3W5 65 0 NA 504 breast stage iia t2 n0 mx female 2011 NA yes infiltrating lobular carcinoma 0 black or african american not hispanic or latino NA NA 4 4 3 2 2 6 6 3 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.155855e-06 8.323135e-07 9.32203389830508 30.5084745762712 4.23728813559322 32.2033898305085 23.728813559322 9.4590742 9.7594247 11.2306968 8.2595465 8.1962082 9.1941836 10.4386944 9.8223935 11.7971013 12.2506843 10.0170855 10.0732504 1.3034008 17.5130786 3.0403840 10.9583470 5.5764314 8.3220764 6.6010933 11.9648938 -1.2813863 11.1512530 7.3183629 9.8521832 10.1675988 6.0582992 -1.2813863 10.9890374 10.4480709 3.5258058 9.7716973 7.2653450 NA 5.5258058 9.2182961 10.4395493 9.0313332 9.8795820 9.4429640 11.3505365 5.3034118 8.7587399 15.1748045 7.5325196 10.5096049 10.3178981 10.2542115 4.7845406 5.1107683 8.2730389 10.9339831 -0.2815617 10.7226706 5.6132664 7.3478065 6.1107683 9.6871169 11.4582307 10.7149236 11.8204258 12.1246551 7.7324707 9.9887455 9.7673865 10.6609646 10.8012644 4.7628431 11.0335997 9.4049506 -1.2813863 10.5245970 8.6447461 2.9724353 6.0403774 9.3748749 9.5552895 9.8522345 8.8164823 2.8059115 8.6283431 12.9084291 12.2072944 10.0015385 9.7345620 0.8308000 0.8437800 -0.1715700 -0.0715950 0.1345600 -0.0093936 0.3265800 -0.2908200 -0.7952700 -0.4787000 0.3976300 -0.0058350 0.0263850 -0.4302800 0.2579400 0.2579400 0.2697100 0.2264300 0.1793700 -0.0344840 -0.1209400 -0.4395000 3.6569000 -0.4330000 0.1628100 0.1628100 0.0691070 0.4397100 -0.0803230 0.2656200 -0.7279000 -0.1715700 0.1910300 0.7351300 -0.0093936 -0.0093936 0.3307700 -0.2908200 -0.2908200 0.9786900 0.2650000 -0.4839600 0.3382200 0.3382200 -0.0887610 -0.1643200 0.0263850 0.0263850 -0.4302800 0.2579400 -0.7541700 -0.7541700 0.2697100 -0.4230800 -0.4230800 -0.4415500 -0.1236100 0.2030600 -0.0651680 -0.4606800 -0.4395000 -0.4648200 -0.7351100 0.1628100 0.0765780 -0.4578900 -0.0695890 0.3021900 0.3202900 0.000 0.000 -0.395 -0.113 0.226 0.226 -0.438 0.000 0.000 0.249 -0.184 -0.431 -0.431 -0.152 -0.353 0.000 0.000 0.000 0.844 -0.425 0.015 0.000 0.302 0.000 0.000 0.000 0.000 0.135 0.135 0.000 0.000 0.036 -0.291 0.265 0.265 -0.484 -0.285 0.338 0.000 0.000 0.000 0.000 0.000 -0.395 -0.113 0.226 0.226 -0.438 0.000 0.000 0.249 -0.184 -0.431 -0.431 -0.152 -0.353 0.000 0.000 0.000 0.844 -0.425 0.015 0.000 0.302 0.000 0.000 0.000 0.000 0.135 0.135 0.000 0.000 0.036 -0.291 0.265 0.265 -0.484 -0.285 0.338 0.000 0.000 0.000 8.0956607 NA 6.9376186 11.2534824 11.0583001 7.1504490 11.8440250 8.8474498 9.5301781 1.5258183 12.2358734 12.0493670 3.8883731 0.7184383 4.1778779 7.7628444 5.1778819 11.6343295 10.9607311 10.6041465 8.9168952 5.1941816 8.1509922 10.7411647 8.3183629 4.9279012 1.8883828 NA 10.7261782 6.2883050 7.1530787 8.5209663 9.4067003 10.8021654 9.7986014 5.2103031 9.7184502 -0.2815617 8.0426307 12.3654587 8.8386880 9.6162956 NA 6.7408183 8.0153665 1.8883828 5.6373146 0.3034593 6.7408183 5.9011420 4.3623086 10.6399192 6.8833569 9.9199614 10.9831859 9.1850365 5.7952656 10.4716669 12.6288118 9.1032338 5.1941816 5.5513407 9.5039026 4.7184493 1.7184383 -0.2815617 4.1107641 11.721531 7.190125 8.771018 17.513079 10.022351 11.211555 11.964894 10.317898 9.070273 10.148380 12.894078 8.738041 8.273039 8.310907 3.040384 6.660964 11.183761 11.487875 13.291742 4.966380 14.159349 9.006163 7.383786 8.751873 7.947269 10.133738 8.108619 7.918123 10.017086 8.013071 1.718438 10.419757 9.777795 7.531269 12.963557 10.782856 10.987869 8.040378 9.335918 9.024512 7.322077 11.372742 9.031333 10.227730 10.206792 10.488701 11.109694 10.586501 10.312308 7.506353 7.666818 9.748358 7.709972 10.933983 7.190125 10.722671 8.226245 10.912831 9.687117 7.604146 13.587032 9.995156 9.761477 12.117060 11.979811 4.672646 1.718438 10.102154 9.836742 9.391759 TCGA-AC-A3W6 90 0 NA 602 breast stage iiia t3 n1 mx female 2012 NA no infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 3 3 5 3 6 4 4 3 6 2 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.771866e-06 1.11759e-06 14.3646408839779 61.878453038674 2.76243093922652 17.6795580110497 3.31491712707182 9.2739995 9.2651935 11.4394739 7.9259876 7.8831442 9.2213515 10.6497321 9.6579783 11.3414129 8.3619789 10.8217439 10.1719534 1.5509499 11.9869159 2.0655378 10.2434390 6.2274080 8.3765882 9.0162230 12.3305502 1.5509499 13.7018287 6.9962588 9.8685028 9.8495016 3.7435904 -0.2563558 10.8882387 9.6594726 3.4440309 9.6376530 7.1572206 NA 4.9724124 9.6728515 9.9135182 9.0519321 11.0202992 9.3029701 10.7855944 2.5509499 10.1677595 15.2624614 8.7979941 11.3400135 10.0456608 9.6054554 5.3729486 2.0655378 8.2414450 11.9909273 0.7435581 10.7104591 5.8310564 6.4984807 5.3583013 9.4808405 11.7108194 10.5302711 12.2621234 12.3924001 8.4230730 10.0817723 10.0009810 10.6220273 10.9266081 3.9135213 11.3362838 11.3831599 -0.2563558 10.5237228 8.6231762 3.7884247 5.5380104 10.6368946 9.1164583 9.9141441 8.7194412 5.2513896 8.8586369 13.1495988 12.1212104 9.6794949 10.2060954 0.14533000 0.14533000 -0.00193990 -0.00193990 -0.00719580 0.05736800 0.00610900 -0.00968060 0.00041593 0.00041593 0.00041593 -0.00110870 -0.00041585 0.00610900 0.00610900 0.00610900 0.00000000 0.00000000 -0.33653000 0.00152550 0.00868070 -0.31447000 -0.31447000 -0.32287000 0.01447000 0.01447000 0.01447000 0.01670500 0.14533000 0.14533000 -0.00083160 -0.00193990 -0.00719580 -0.00719580 0.05736800 0.05736800 0.00610900 -0.00968060 -0.00968060 0.05529900 0.05736800 0.00041593 0.00208050 0.00208050 0.00208050 0.00208050 -0.00041585 -0.03299600 0.00610900 0.00610900 -0.00193990 0.00847430 0.00000000 0.00000000 -0.32391000 -0.33653000 -0.00138580 -0.00138580 0.00277450 -0.30404000 -0.31447000 -0.31447000 -0.32426000 0.01447000 0.01447000 0.01670500 0.00277450 0.02904400 0.02904400 0.000 0.000 0.000 0.000 0.000 0.000 -0.337 0.000 0.000 0.000 -0.304 -0.314 -0.314 -0.324 -0.324 0.000 0.000 0.145 0.145 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.337 0.000 0.000 0.000 -0.304 -0.314 -0.314 -0.324 -0.324 0.000 0.000 0.145 0.145 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5216703 7.8363502 6.4646928 11.3446675 10.6628289 7.9186933 11.8607492 8.9406378 9.5743540 4.4160155 11.8356896 11.5384760 3.0655206 -1.2563558 3.8728780 6.2354456 4.2030210 11.8388253 11.0513632 10.3034482 8.7645731 4.0655206 8.1423368 10.4300937 8.4335913 6.1698589 1.5509499 NA 10.7988756 7.3360504 7.2904880 7.5605766 7.2981817 11.6253457 10.2248880 5.3285565 9.5059753 -1.2563558 8.0405095 12.7780483 9.8250766 9.2162839 -1.2563558 -0.2563558 7.5541644 3.4440309 5.9334168 0.3286067 6.7093775 5.9747174 4.6743307 10.2715587 NA 8.2091594 10.7212308 9.5208485 6.4300929 10.5561716 12.3742016 9.1444727 2.2030132 5.5764828 9.7028707 2.2030132 -1.2563558 -0.2563558 3.0655206 12.750501 6.074510 8.245431 11.986916 9.848192 10.292415 12.330550 11.803951 8.817735 9.892705 12.835524 10.029573 8.241445 8.174046 1.328549 6.601575 10.968499 11.4802065 13.0192084 6.4300929 13.2795361 8.9085001 7.9915207 8.3210221 7.3360504 10.6588638 8.7108195 9.2817822 10.8217439 7.3172407 4.6504831 10.4270265 5.9819987 7.5839305 10.3063126 10.7896940 10.3941962 7.1823854 9.6684057 9.1667092 6.4984807 11.1076457 9.0519321 10.6042922 10.0387882 10.8264075 11.2474189 10.1359106 10.4331544 8.1677593 0.3286067 10.1297575 9.0566803 11.9909273 5.9819987 10.7104591 6.9135178 11.6412495 9.4808405 6.6802315 14.1391942 10.2157763 10.2880746 12.3285556 11.3869984 0.3286067 NA 9.5637721 9.4984807 9.4448995 TCGA-AC-A3W7 66 0 NA 471 breast stage iib t2 n1a mx female 2012 NA no infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 5 5 3 3 3 4 3 3 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.491228e-06 7.282743e-07 20.5882352941176 52.9411764705882 4.41176470588235 11.7647058823529 10.2941176470588 9.5623728 9.5028356 12.2205447 9.3913753 7.5537698 9.2141897 11.8785714 9.2796484 10.5554947 10.8129163 10.8445310 10.2561553 2.7208694 13.0719697 2.5093665 10.0619438 6.5188357 8.3621108 10.6096232 12.9813718 3.5093791 13.9776247 8.9276722 9.4726370 10.8534381 5.0296340 NA 8.9747146 9.0337630 3.9618918 8.3581633 7.2642634 NA 4.2387257 9.9021452 9.4150004 9.1914464 12.0675951 10.0012289 11.5544888 3.3058392 11.4265123 14.7057191 9.5182997 11.0893844 10.8165167 10.3758414 5.1683372 4.7532997 8.3515608 11.7859900 0.2614706 10.5497377 4.6190021 5.2614481 4.6877158 10.0217525 11.8759281 10.5543451 12.4693015 12.7196627 8.0784321 9.8998842 10.0403016 11.1387324 11.4810706 4.7850117 11.4488004 10.8417069 -0.7386497 10.3699727 8.5946038 5.0298990 4.0943374 10.4304337 9.9125000 9.9102552 9.0517968 3.8160364 10.5514672 13.3594804 12.2389071 10.4986583 10.0092217 0.5693400 0.5729100 0.0036076 0.0036076 -0.0095426 0.0000000 -0.0008316 -0.0008316 0.0260920 0.0260920 -0.0055375 0.0291840 0.0241960 0.0186170 0.0186170 0.0186170 -0.5742400 0.0794470 -0.0024938 0.0283410 0.0467000 -0.5383500 -0.5383500 -0.5383500 0.0891270 0.0891270 0.0891270 0.0672320 0.0296060 0.0296060 -0.0049844 0.0036076 -0.0095426 -0.0095426 0.0000000 0.0000000 -0.0008316 -0.0008316 -0.0008316 0.0095883 0.0114000 0.0260920 0.0188030 0.0188030 0.0188030 0.0461330 0.0241960 0.0241960 0.0471260 0.0186170 0.0186170 0.0186170 -0.5742400 -0.5558700 -0.5558700 -0.0024938 0.0283410 0.0283410 0.0467000 -0.5539700 -0.5383500 -0.5383500 -0.5628600 0.0891270 0.0891270 0.0387710 0.0332670 -0.5215400 -0.5403500 0.000 0.000 0.000 0.000 -0.574 -0.574 0.000 0.000 0.000 0.000 -0.554 -0.538 -0.538 -0.563 -0.563 0.000 0.000 0.000 0.535 0.000 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.574 -0.574 0.000 0.000 0.000 0.000 -0.554 -0.538 -0.538 -0.563 -0.563 0.000 0.000 0.000 0.535 0.000 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5034314 2.3489122 5.4709012 11.6667228 10.7221601 8.2154121 12.5480783 8.9787734 9.1306334 2.6537709 11.5572173 10.9457805 4.1194309 0.2614706 4.1440953 7.7043920 3.3907365 10.1194293 11.5155911 10.7221601 8.9592848 6.6877130 8.2301151 10.6443425 6.6364883 6.2214499 1.9618826 -1.7384090 10.9518829 6.6708389 7.4288668 7.8006068 8.0639645 11.8244980 10.5058121 4.9618872 9.4848467 -0.7386497 8.1348924 12.5333490 10.0542385 8.0832224 0.2614706 3.1683372 7.7351539 NA 4.2838181 0.8463930 4.8464131 5.8969862 3.6877102 10.3900871 -0.7386497 8.8641471 10.8796044 8.8407644 5.0816294 10.2838161 11.3797406 7.6644601 2.7850064 3.9893661 10.1562660 2.4313823 -1.7384090 2.0688084 2.6537709 12.990587 5.283814 8.300367 13.071970 10.600185 10.331569 12.981372 12.697835 9.239637 9.768252 13.002599 9.872934 8.351561 9.072020 1.431356 6.901694 11.186261 11.4856008 12.9780534 5.5093760 13.8273227 9.0155006 6.0230002 8.7422384 7.1100709 10.6985943 7.2444419 9.2893543 10.8445310 7.9071070 5.3803901 11.2150992 5.8761584 7.0621865 11.0530182 11.0415779 10.6093465 7.3829819 9.3119771 10.9976388 4.9338747 11.2439001 9.1914464 10.3640803 10.2765148 11.5569303 10.8782268 10.0639646 10.6703087 8.8798338 NA 10.1877258 7.0122893 11.7859900 4.9618872 10.5497377 7.1773278 11.2418164 10.0217525 7.4035558 14.0059663 10.1690901 10.3449277 12.3153742 11.7536771 0.2614706 2.0688084 10.1321983 10.2772118 10.0667891 TCGA-AC-A3YI 74 0 NA 707 breast stage iiic t1c n3a mx female 2012 NA yes infiltrating lobular carcinoma 12 white not hispanic or latino NA NA 3 3 NA NA 3 3 4 3 6 2 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 6.935946e-08 23.0769230769231 7.69230769230769 15.3846153846154 30.7692307692308 23.0769230769231 10.202892730 9.284543051 11.665088710 8.930330783 8.113755187 8.539115762 10.111811074 10.197403715 11.429713452 11.693961070 10.275888552 10.241927514 3.240146387 13.644730345 1.314174451 11.673679508 6.713320522 8.867202741 9.569650199 11.127610067 2.314145441 12.524333817 5.992222333 9.425243393 9.780124041 5.384540295 NA 10.381842058 8.820358011 5.014587391 9.256663956 9.065024002 0.992188336 4.899112777 9.644170122 10.062342339 10.075700818 11.124078392 9.688319557 10.965560072 8.277623564 9.890822852 15.283608005 8.565262813 10.194957488 10.747108911 10.840844393 5.162145571 4.384540295 8.505948871 11.937482368 0.577150837 10.561602420 7.216222999 6.259008785 5.182044687 9.479056512 11.733056262 10.306804725 12.932626810 12.720354530 7.986574765 10.708183442 10.520763434 10.628392862 11.353891144 4.747108072 11.027364193 12.030283068 -0.007811664 10.624762289 9.501996370 4.742022384 5.100746428 10.815190497 9.860272251 11.026676556 9.639679860 3.636079338 9.748777694 13.480877527 13.375183137 9.059655682 9.491070623 7.6600e-02 7.6600e-02 7.2580e-04 -7.8539e-03 -1.9074e-03 -1.0610e-04 -4.6754e-03 -4.6754e-03 1.1057e+00 9.2741e-01 3.6317e-01 4.4846e-04 4.4846e-04 3.2525e-05 -6.9702e-02 -6.9702e-02 -4.7552e-03 -4.7552e-03 -3.8454e-03 3.2525e-05 1.8355e-03 1.4193e-03 1.4193e-03 1.4193e-03 3.2525e-05 3.2525e-05 3.2525e-05 3.0847e-03 7.6600e-02 7.6600e-02 1.8556e-02 7.2580e-04 -1.9074e-03 -2.7382e-03 -1.0610e-04 -1.0610e-04 -4.6754e-03 -4.6754e-03 -4.6754e-03 -3.1535e-03 -3.1535e-03 -1.7497e-01 -1.4918e-03 -1.4918e-03 -1.4918e-03 2.7821e-02 4.4846e-04 4.4846e-04 3.2525e-05 3.2525e-05 -6.9702e-02 -6.9702e-02 -4.7552e-03 -4.7552e-03 1.0596e-02 -4.6754e-03 3.2525e-05 3.2525e-05 1.8355e-03 -1.6363e-01 1.4193e-03 1.4193e-03 2.2519e-03 3.2525e-05 3.2525e-05 3.0847e-03 -4.0649e-03 6.8780e-01 -1.4471e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.149 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.149 0.000 0.000 0.000 0.000 8.208967349 4.636079338 6.492067882 11.211087352 10.845141018 7.932211799 10.646857478 10.346873033 8.739272962 2.899117612 12.927018033 11.528281602 3.515788132 NA 5.296002134 8.627032593 3.079685307 10.880964711 11.422673997 10.645066374 9.024267036 0.992188336 8.126647693 10.279356607 6.592134077 6.221039905 2.451646328 -0.007811664 11.007636463 5.664647808 7.244887059 7.476037338 8.603246150 10.613101005 10.111811074 1.992224599 8.505948871 0.577150837 8.397362746 13.086134118 9.533318051 8.334296082 NA 4.636079338 7.692660830 -1.007811664 5.141968143 -1.007811664 4.747108072 4.314152694 2.799584701 10.435164969 1.799584701 9.833785726 10.789072235 9.981615942 5.349772181 9.552554215 11.484825764 8.671701691 2.451646328 4.577181056 10.410601125 -1.007811664 NA 0.992188336 2.577175012 12.610967 5.500015 7.884005 13.644730 9.932535 10.198015 11.127610 11.650210 8.897608 10.449602 13.439434 12.365086 8.505949 8.459827 -1.007812 7.447549 10.517742 11.841627 12.187286 5.546811 14.130732 8.595848 6.531380 8.716735 6.806003 10.157606 6.812401 7.216223 10.275889 6.090254 4.240146 11.038322 6.928859 6.208094 12.120055 10.165274 10.228236 8.044790 9.841627 10.808405 6.569651 11.934571 10.075701 10.661106 9.603246 11.510875 11.050551 10.418486 10.460336 8.069037 3.240146 9.708887 7.507921 11.937482 7.507921 10.561602 7.925912 12.396964 9.479057 7.225841 14.404196 9.976640 9.941319 13.383666 10.844361 4.036618 NA 10.001350 9.547769 9.949324 TCGA-AC-A3YJ 66 0 NA 754 breast stage iia t2 n0 (i-) mx female 2012 NA no other, specify 0 white not hispanic or latino NA NA 3 1 2 2 4 1 1 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 3.121176e-07 29.6296296296296 22.2222222222222 3.7037037037037 25.9259259259259 18.5185185185185 9.3445223 8.4864747 10.8260624 6.3252155 8.9680337 8.8393559 9.7399821 9.7261451 10.0276466 13.0313746 11.2306647 10.1941757 0.9414820 12.8565494 2.1114320 8.5227110 7.2589231 7.5302253 9.2532587 12.9692436 3.1114320 13.8952066 2.4009477 10.3128132 9.9776839 8.1846845 NA 10.2996120 11.8325345 1.7488476 7.9044064 5.7359256 NA 2.6419390 9.4660520 9.0937952 10.1852793 9.5708668 8.9457309 10.1007510 NA 10.4537570 14.2235128 7.9264413 10.1655120 9.8226242 9.8737251 3.6419506 8.5283502 7.5075647 9.9386898 0.5264695 10.4318599 3.0289757 5.2452903 3.7488691 10.0102886 12.1162800 10.4728917 10.9108968 11.9211142 10.2211209 10.2401457 10.0409239 10.2217011 9.8355701 3.9415101 10.9439738 11.1790191 NA 10.8367069 8.2059530 2.2691828 4.5853652 10.7407919 9.3698706 10.3735302 8.3078324 2.4009477 5.5113668 11.6941001 11.1319524 10.0096167 9.0539498 0.69260000 1.45430000 -0.00415460 -0.00705760 -0.00013862 0.00360760 -0.00387060 0.00000000 0.00958830 0.00958830 0.00958830 0.00152550 0.00152550 0.00287180 0.00287180 0.00287180 -0.00152430 -0.00152430 0.00110930 0.00208050 -0.00678130 0.00263570 -0.00013862 -0.00013862 0.00124810 0.00124810 0.00124810 0.00152550 -0.00816240 -0.00816240 -0.00041585 -0.00415460 -0.00277070 -0.00013862 0.00360760 -0.00229380 -0.00387060 0.00000000 0.00000000 0.00152550 0.00152550 0.00958830 -0.00180140 -0.00180140 -0.00180140 -0.00180140 0.00152550 0.00152550 -0.00059069 0.00287180 0.00287180 0.00287180 -0.00152430 -0.00152430 -0.00152430 0.00110930 0.00208050 0.00055459 -0.00678130 0.00499690 0.00263570 -0.00013862 0.00235810 0.00124810 0.00124810 0.00152550 0.01642500 -0.00429290 -0.00429290 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.454 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.454 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.38341702 NA 7.98863413 11.42809396 11.58941839 9.53260256 11.69389096 5.50237834 9.90518676 -0.05844292 11.94976384 11.79450010 3.18944506 3.98590112 -1.05859316 7.94151013 3.74886908 10.45770283 11.07304578 10.56264646 9.55345727 6.35936303 8.97217740 11.08393653 6.20829680 4.02897574 3.58537121 NA 9.86483784 6.48840414 6.25439374 7.79013342 7.60328807 11.44767408 9.97217740 7.81187493 8.59793522 NA 7.19889779 12.92066753 9.80801654 8.80414780 1.26345513 2.74886908 8.95692525 2.11143201 3.98590112 1.26345513 3.84839760 6.24656960 3.46507331 10.46800957 -1.05859316 5.64195057 10.55161243 9.39065887 4.74886371 9.01431289 11.04840036 9.47872877 2.26342508 3.64195057 11.78895922 3.18944506 -1.05859316 -1.05859316 2.74886908 12.44897175 5.31655126 8.57268734 12.85654939 9.95831868 11.88914728 12.96924358 12.32656381 8.47049172 9.34984006 12.42759111 11.10106638 7.50756474 12.45276882 -0.05844292 7.28580630 9.93868982 10.351962 12.320618 5.007599 13.845436 8.394781 4.070793 8.128863 6.866323 9.838932 7.947135 6.299061 11.230665 6.350902 NA 9.807244 10.444839 6.449543 7.599722 10.092527 10.695980 8.376201 10.217053 7.217635 3.400948 11.242632 10.185279 10.860001 10.164909 10.215306 8.849903 9.187063 10.128244 6.409116 NA 10.039918 8.671131 9.938690 3.263440 10.431860 4.556221 11.068215 10.010289 6.376139 14.747607 10.652747 10.103272 11.783468 10.136883 NA -1.058593 9.425326 9.136267 8.888417 TCGA-AC-A4ZE 63 0 NA 890 breast stage iib t3 n0 m0 female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 2 2 2 6 4 3 4 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.28102623 9.53558760 11.29112862 9.53166003 8.57492157 9.18843653 10.60824743 9.30806548 10.69567374 12.01197452 12.16062600 10.31188713 5.01268040 13.27956325 3.51518258 8.94144411 6.76310744 9.06434129 10.22821215 13.34797643 0.01264018 14.37398327 6.09305305 9.35527246 11.09527174 7.72692452 -1.57217932 8.97171512 9.62677550 2.59765035 7.62738870 5.15563591 NA 4.42771343 9.62124200 10.47654401 8.90648628 10.90066125 9.19341719 11.59497796 12.56342591 11.64446249 14.03588480 7.38057448 10.35993137 10.82378621 10.85319484 5.75863364 NA 9.02390651 12.18061991 0.01264018 11.01009390 3.85398567 4.71311840 3.88714505 10.03504691 12.14828155 10.07742194 11.14539304 12.97207741 7.57492119 10.94169088 10.94239618 11.51650487 10.69157264 5.07157391 11.41870691 10.72463288 -0.57217932 10.24029513 8.86858584 4.78738022 4.85398068 9.08682065 9.61135204 10.82859604 9.80221277 2.95127073 9.75245976 12.41515831 12.35067263 10.33685966 9.71888730 0.82915000 0.88926000 -0.00304750 -0.00304750 0.00917050 0.00374650 0.00411560 -0.91808000 0.00126750 0.00126750 0.00000000 -0.45244000 0.01223700 0.00083195 3.65690000 3.65690000 -0.00069303 -0.00069303 -0.44986000 0.01992300 0.00944910 0.02468900 0.02468900 0.02468900 -0.02534600 -0.02534600 -0.02534600 0.00166420 -0.94828000 0.00271040 -0.00691950 -0.00304750 0.00917050 0.00346870 0.00374650 0.00374650 0.01349200 -0.91808000 -0.91808000 0.00041593 0.00041593 0.04485700 -0.00152430 -0.00152430 -0.00152430 -0.00152430 0.01195800 0.01195800 0.00083195 -0.03572100 -0.91965000 -0.91965000 -0.00069303 -0.00069303 -0.00069303 -0.44555000 -0.00284490 -0.00284490 0.00944910 -0.97337000 -0.92629000 0.02468900 0.00610900 -0.02534600 -0.02534600 0.00166420 0.03608800 0.02048300 0.02862200 -0.452 0.000 0.000 -0.884 0.000 0.000 -0.446 0.000 0.000 0.000 -0.906 -0.926 0.000 0.000 0.000 0.000 0.000 0.000 0.875 0.000 0.000 -0.898 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.918 -0.918 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 -0.452 0.000 0.000 -0.884 0.000 0.000 -0.446 0.000 0.000 0.000 -0.906 -0.926 0.000 0.000 0.000 0.000 0.000 0.000 0.875 0.000 0.000 -0.898 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.918 -0.918 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 8.40499676 NA 6.77644488 11.14796087 11.03943310 7.97420577 11.17926066 9.30522318 8.73868138 2.74964153 10.46285937 11.14418247 6.24149701 4.47211080 4.74964689 6.91153221 3.01267593 9.67089060 12.07213626 11.07247424 9.58758796 5.27320628 7.84134482 10.30269798 7.26692050 8.42065503 -1.57217932 NA 10.63869230 9.17758597 4.51518258 7.23828817 5.67564377 11.79559817 10.87195505 4.18260491 9.45700384 NA 7.79403890 13.08475590 9.95665901 8.07157284 NA 1.59765035 8.29345004 5.28569813 4.07157391 0.42771343 5.38191320 6.37479780 2.51518258 9.95323744 0.01264018 7.68510478 10.65051157 9.74682416 4.90344807 10.54015614 11.15882349 7.65171833 2.88715480 2.88715480 11.06366142 0.42771343 NA 4.74964689 1.74966298 15.254218 5.169183 8.527064 13.279563 9.979905 10.555389 13.347976 13.143518 10.347198 10.928036 12.319216 11.914175 9.023907 8.525749 2.887155 7.228617 10.956903 11.0283265 12.3458345 7.5749212 13.4472118 8.2700668 5.8027567 9.8130398 8.8005816 10.6163858 6.5257494 8.2700668 12.1606260 5.9275623 -0.5721793 10.7052947 5.8539807 7.9801744 9.1220745 10.3691311 10.5141846 7.1624266 9.4057120 12.8884925 4.2856981 12.5444139 8.9064863 10.5598950 10.0863744 10.4676638 10.5244318 9.9961478 10.7767214 8.2810264 0.7496630 8.8020281 5.4572791 12.1806199 3.0126759 11.0100939 2.8200360 10.9799054 10.0350469 8.0897264 14.2391164 9.3315984 9.6389966 12.3850908 11.3860881 -1.5721793 2.5151826 10.1725505 10.1963145 10.5155109 TCGA-AC-A5EH 76 0 NA 511 breast stage iib t2 n1mi mx female 2012 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 1 2 NA NA 2 2 2 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.155855e-06 1.179111e-06 7.8740157480315 22.8346456692913 4.7244094488189 37.007874015748 27.5590551181102 9.1388127 9.0861500 11.2295621 8.5722023 7.9628064 9.3739640 10.4093909 9.7901217 11.6369609 13.5574242 11.4588400 10.1170138 4.0074198 12.7496621 2.4224483 11.6268380 5.9604190 7.7664096 11.4592626 11.8044970 -1.2778838 13.5141446 4.9508323 9.5286776 9.8557996 6.2455774 0.3069621 11.9369414 11.6672762 1.0439744 9.0740588 7.2842578 NA 4.2138683 8.5675051 10.8081515 7.3293452 11.5815501 9.6153168 10.9888018 NA 9.5533225 15.3359773 7.8909628 9.8673106 10.6334072 9.9351195 4.5293712 7.1896210 8.5643656 10.3102614 1.3069621 10.7698208 5.3513704 6.1649592 5.1143337 10.4107027 11.5539162 10.3577333 12.0390038 12.6249556 8.0707435 10.5962282 9.6411690 10.8429011 10.5461784 4.4224550 12.0550308 10.4384061 -1.2778838 10.5973807 8.7513024 2.8983438 5.8200462 10.8341289 9.3404007 10.2387002 8.4752320 3.6762110 9.1409220 13.1282867 11.9648916 9.0085729 9.2118632 0.0440890 0.0817550 0.0475520 0.0204830 -0.2584200 0.0413170 -0.6335100 -0.2578100 -0.5974000 -0.5974000 -0.2447200 -0.0047079 0.0203430 -0.6095000 0.0420240 0.0420240 0.0063400 0.0535210 0.0351000 0.0195030 0.0058309 -0.0145030 -0.6378400 0.0284810 -0.0385780 -0.0385780 -0.0385780 0.7038200 -0.2867900 -0.2867900 -0.2910600 0.0553730 -0.1738600 -0.2584200 0.0522410 0.0522410 -0.6335100 -0.6344300 -0.3067000 0.0440070 0.0592230 -0.5974000 -0.6087300 -1.2263000 0.0382060 -0.6729700 0.0203430 0.0203430 -1.0540000 0.0420240 0.0417410 0.0417410 0.0535210 0.0525250 0.0525250 0.0369350 0.0195030 0.0000000 0.0058309 -0.6171000 -1.2499000 -0.6378400 -0.6249300 -0.0385780 -0.0385780 0.6978800 0.0210430 -0.6773800 -0.3117000 0.000 0.000 -0.610 0.000 0.000 0.000 -0.596 0.000 0.000 0.000 -0.617 -0.646 0.000 -0.289 -0.289 0.000 0.000 -0.287 0.000 0.704 0.704 0.000 -0.306 0.000 0.000 0.000 0.000 -0.272 -0.272 0.000 0.000 -0.634 -0.263 0.000 0.000 -0.592 -0.245 -0.510 0.000 -0.205 -0.205 0.000 0.000 -0.610 0.000 0.000 0.000 -0.596 0.000 0.000 0.000 -0.617 -0.646 0.000 -0.289 -0.289 0.000 0.000 -0.287 0.000 0.704 0.704 0.000 -0.306 0.000 0.000 0.000 0.000 -0.272 -0.272 0.000 0.000 -0.634 -0.263 0.000 0.000 -0.592 -0.245 -0.510 0.000 -0.205 -0.205 8.5985323 8.0166362 7.9958107 11.4877158 11.6242019 6.9065936 12.0421106 8.4983167 9.5685243 1.5293712 11.9334473 12.0626373 4.2766009 2.6289135 2.9699517 6.3144718 4.0439394 11.0875175 11.9413351 10.3154064 8.9663791 1.8919246 7.6497929 10.6008325 5.8717623 5.1314043 4.8512993 NA 10.6921212 3.6762110 8.1649587 9.6906821 4.9314703 10.0652010 9.4465292 4.3367261 9.5604312 0.3069621 8.1461817 12.3299235 7.9699425 8.0883372 NA 6.4499360 8.0166362 0.7220288 3.9314656 3.9314656 5.1314043 5.1671130 3.1814524 10.1244945 0.3069621 8.8894334 10.1987614 9.9025461 4.8512993 9.3367250 12.3813422 8.6378946 0.7220288 4.8919392 11.1300796 4.4769001 NA 0.7220288 3.0439394 12.509102 7.152467 8.569073 12.749662 9.212866 11.107338 11.804497 10.196228 8.987630 10.018931 12.773309 10.024083 8.564366 10.082314 -1.277884 7.189621 11.120492 11.764530 13.040629 6.470208 14.247290 8.709279 5.336726 9.204823 7.579996 9.865398 7.586201 3.891944 11.458840 7.503375 3.181452 9.869220 5.197747 7.823387 10.276124 9.985871 10.527356 9.008250 9.422455 8.408516 2.722007 10.610450 7.329345 10.265530 10.197242 11.204823 9.916157 10.212866 11.067421 8.658653 10.050690 10.430297 7.233768 10.310261 2.529371 10.769821 8.915541 10.340401 10.410703 6.173225 13.742431 10.805162 11.095968 12.280197 11.260447 -1.277884 2.043939 9.851298 9.726236 8.383793 TCGA-AC-A5EI 88 0 NA 442 breast stage ib t1c n1mi mx female 2012 NA no other, specify 1 white not hispanic or latino NA NA 3 4 5 3 NA NA 2 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 19.2307692307692 26.9230769230769 7.69230769230769 19.2307692307692 26.9230769230769 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.27363000 0.20886000 -0.00304750 1.03770000 -0.01363100 1.01680000 -0.01395300 -0.01395300 0.46810000 0.46810000 0.46810000 -0.00415460 -0.00415460 -0.01298900 -0.01298900 -0.01298900 0.00555290 0.00000000 -0.02562000 0.51228000 -0.00318590 -0.01285100 -0.01285100 -0.01285100 0.89267000 0.89267000 0.89267000 1.04510000 -0.00719580 0.27363000 0.00819590 -0.00163820 -0.01363100 -0.01174900 1.01680000 1.00990000 -0.01395300 -0.01395300 -0.02096100 1.59480000 1.59480000 -0.05320600 -0.00857660 -1.06770000 -0.01038300 -0.01381500 -0.00415460 -0.00415460 -0.00705760 -0.01298900 -0.01298900 -0.01298900 0.00555290 0.00000000 0.00000000 -0.00581400 0.51176000 0.51176000 0.00610900 -0.15067000 -0.03263600 -0.01285100 -0.00013862 0.89267000 0.89267000 -0.00318590 -0.00097017 -0.01340200 -0.01340200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.512 0.000 -0.151 -0.151 0.000 0.000 0.000 0.000 0.893 0.893 0.274 0.274 0.000 1.045 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.017 1.017 0.000 0.000 1.595 1.595 0.468 0.468 0.000 0.000 0.211 0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.512 0.000 -0.151 -0.151 0.000 0.000 0.000 0.000 0.893 0.893 0.274 0.274 0.000 1.045 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.017 1.017 0.000 0.000 1.595 1.595 0.468 0.468 0.000 0.000 0.211 0.211 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AC-A5XS 74 0 NA 588 breast stage iia t2 n0 mx female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 3 2 2 6 4 3 9 2 2 0 0 0 0 7 0 6 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 6 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.172175e-05 4.092208e-06 9.2274678111588 77.8969957081545 3.21888412017167 7.72532188841202 1.931330472103 9.4349895 8.8216710 9.1118506 6.5012226 9.0410978 9.6115693 9.0296022 9.5751313 10.1027370 9.8201889 10.6850558 10.0575426 3.7012496 12.6126398 3.1418251 9.9155669 5.6218145 8.1559880 10.0359999 12.1171405 -0.1060942 13.0937953 8.2404069 10.4477382 9.7909821 8.1082118 0.4788165 12.3379967 10.1641883 NA 8.8495427 6.3451036 NA 4.1033466 10.1571621 9.1700174 9.8305309 10.7707935 9.6768911 10.0442748 7.4900823 11.2843306 13.8872736 4.2510904 10.4100854 9.6479453 9.9925831 4.3533233 6.1700172 7.7917385 12.4871673 NA 10.7491507 6.2602158 5.9051198 3.3533233 10.2634902 11.7839672 10.5773262 11.0947915 12.2702897 9.4993724 10.6008206 10.3932406 10.8116379 9.1465582 1.7012385 11.1054771 9.6939840 -1.1062495 9.8480893 8.7932499 3.1087921 6.2426216 11.2368009 9.3887486 9.8238910 9.2937050 2.2158339 8.2135650 12.6722781 13.0986169 9.2292834 10.1063893 0.60799000 0.92638000 0.01544700 0.02300500 -0.45018000 0.01223700 0.61498000 -0.36068000 0.01712400 0.01712400 0.01712400 0.00166420 0.00166420 -0.00263220 -0.00263220 -0.00263220 -0.47986000 0.00000000 -0.04644800 -0.00221680 -0.01972600 -0.03789800 -0.03789800 -0.03789800 -0.03871400 -0.03871400 -0.03871400 0.43361000 -0.49830000 0.00388540 -0.02564300 -0.46855000 -0.46825000 -0.45018000 0.01223700 0.01223700 -0.40252000 0.11038000 -0.38470000 0.00833510 0.00833510 0.01712400 -0.00429290 -0.00429290 -0.00429290 -0.00429290 0.00166420 0.00166420 -0.00263220 -0.00263220 -0.00263220 -0.00263220 -0.47986000 0.00000000 0.00000000 -0.04644800 -0.00221680 -0.00221680 -0.01972600 -0.48995000 -0.03789800 -0.03789800 0.00958830 -0.05483000 -0.03871400 0.43361000 -0.00069303 -0.50826000 -0.50826000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.910 -0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.926 0.926 0.434 0.434 0.000 -0.508 0.000 0.000 0.000 0.000 -0.450 -0.450 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.910 -0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.926 0.926 0.434 0.434 0.000 -0.508 0.000 0.000 0.000 0.000 -0.450 -0.450 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2645803 3.4788553 6.5159442 10.8535327 11.1343861 7.3235088 10.6102837 6.9575037 9.9328119 4.7518761 12.2708323 11.8769595 3.4174610 -1.1062495 1.2158028 7.5592287 4.1418170 11.3272176 10.8886000 10.4427148 9.6184068 2.8007860 8.2558368 10.4928759 7.5268881 8.1227115 -1.1062495 NA 10.7342775 5.9382881 6.1322972 7.1275126 8.5214269 10.6164700 9.5113603 4.1418170 8.9355520 NA 5.8364064 11.7751981 9.0499759 8.6947928 NA NA 8.6012519 3.1418251 6.2689321 NA 6.5012226 4.0638222 4.3201597 10.1370670 -0.1060942 8.1606792 11.5275693 10.1015175 6.5873800 10.1191004 13.2066341 10.0366382 2.7012385 4.5663159 11.4982145 -1.1062495 -1.1062495 1.2158028 1.8939058 11.2971234 7.7487611 8.0638179 12.6126398 10.4242993 11.4395814 12.1171405 11.3008951 8.7315210 9.2765169 13.4461417 10.9643493 7.7917385 9.7542041 0.4788165 7.4135289 11.4378914 10.3665837 12.4537480 5.7012468 13.8948515 9.4036680 6.8882464 8.5305175 7.8995176 10.2965054 7.9245602 8.8393367 10.6850558 7.2113053 -0.1060942 9.8889534 6.7826366 6.9858044 8.6587645 10.5476337 10.8970595 7.4484814 9.6175538 7.2292832 6.6286030 10.5533626 9.8305309 10.4975193 9.8509950 10.0263927 10.0550248 11.7066719 10.0656952 7.4291682 1.4788683 9.9009202 6.4330512 12.4871673 8.5214269 10.7491507 4.9813549 10.3822353 10.2634902 7.7393830 14.0559199 10.1088191 10.8455420 12.0142928 10.5030717 3.7518707 4.3533233 11.1200040 9.6302948 9.2558368 TCGA-AC-A5XU 74 0 NA 455 breast stage iib t3 n0 (i-) mx female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 2 1 2 1 1 3 1 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.109751e-06 6.242351e-07 32 30 6 18 14 8.6978054 8.8182616 11.0957723 9.2135937 9.3547858 9.2655548 9.8139059 9.5693242 10.2154820 13.7802534 11.5561589 10.8330967 0.6371001 12.3624756 1.9590282 8.9869433 7.6923916 9.1259538 6.2881610 13.0784325 -0.3628999 13.6412420 -0.3628999 10.0027756 9.7331655 7.4282722 1.6371001 8.7072304 9.9420310 0.6371001 8.7219177 6.1684916 -0.3628999 5.4950907 9.7728186 9.7566989 9.4396256 9.0985888 10.0680846 11.0398550 -1.3628999 10.3730884 14.9933722 8.9644038 11.7395772 11.0088860 10.3336423 4.7032004 3.2220781 8.2444395 9.6828691 0.6371001 10.1498499 7.6650154 4.4444617 3.9225119 10.3161496 12.0938488 10.1042053 10.8953809 12.4920751 8.1108153 10.8796881 10.7153669 10.7292058 10.6859367 5.2518175 11.5426844 11.2580165 -1.3628999 10.2328330 8.2646434 4.7359824 4.3650276 11.9508427 10.2337650 10.3440370 8.2518194 3.8070354 5.0121485 11.0733004 10.4774939 10.8272427 9.6677765 0.0543090 0.6413100 0.1681300 0.1579400 -0.0054639 0.2993900 0.3303600 0.3303600 3.6569000 -0.5191200 3.6569000 -0.3503600 -0.4927100 -0.5255700 3.6569000 -0.5309800 0.3173100 0.2834800 0.0538820 0.0264440 0.3250400 -0.2302400 -0.2388100 -0.2388100 0.1953500 0.9305100 2.4437000 0.6541600 -0.5249600 -0.5249600 -0.0100790 0.2548800 -0.0054639 -0.0054639 0.2943800 -0.3072700 0.3303600 0.3303600 0.3303600 0.3137200 0.3473800 0.0741970 -0.5256800 -0.5256800 0.2339300 0.3062600 -0.5382900 -0.5770700 -0.5255700 -0.5344200 -0.5398100 -0.5398100 0.3173100 0.2968400 -0.3057400 0.2669500 0.0413920 0.0413920 -0.2722200 -0.2071500 -0.2340800 -0.2388100 0.1205700 -0.6084900 0.7441400 -0.0072603 -0.5152200 -0.2729000 -0.2729000 -0.350 -0.350 -0.530 -0.530 0.283 0.283 0.267 0.000 -0.268 0.789 -0.210 0.113 0.343 -0.527 0.157 0.000 0.000 0.114 0.638 0.000 0.000 0.000 -0.273 0.000 0.000 0.158 0.158 0.000 0.000 0.299 -0.307 0.330 0.330 0.341 0.341 -0.509 -0.509 -0.252 0.273 0.000 0.000 -0.350 -0.350 -0.530 -0.530 0.283 0.283 0.267 0.000 -0.268 0.789 -0.210 0.113 0.343 -0.527 0.157 0.000 0.000 0.114 0.638 0.000 0.000 0.000 -0.273 0.000 0.000 0.158 0.158 0.000 0.000 0.299 -0.307 0.330 0.330 0.341 0.341 -0.509 -0.509 -0.252 0.273 0.000 0.000 9.0001491 -0.3628999 5.6371088 10.5151603 11.0644222 7.3122195 10.9814052 9.7372000 9.7735174 -1.3628999 12.7301968 11.0629730 11.2811909 -1.3628999 3.6371117 7.9946612 9.4331489 10.3002227 10.8216748 10.1404382 8.6567001 1.8070251 8.2664661 10.2827678 7.4052938 1.9590282 3.0294352 NA 10.1830391 6.8318658 9.3086505 7.4825990 6.0294264 10.8169594 10.0965410 2.3375398 9.3886534 NA 6.0965402 12.5094957 8.5619218 9.5012954 NA 1.2220626 8.3735112 1.2220626 4.8269348 -0.3628999 3.9590375 2.8850276 1.6371001 11.1003783 3.4444683 7.0841929 10.8580922 9.5020692 5.5440000 8.6567001 11.6168918 7.3340766 3.8465635 3.8070354 10.7862213 8.6115239 -1.3628999 5.0121485 0.9590282 14.843643 5.012148 8.766392 12.362476 10.060225 10.524711 13.078433 13.006230 8.688318 10.592759 12.108658 12.269650 8.244439 8.246288 NA 7.112843 10.490809 11.635171 12.186533 8.279161 14.014759 8.545502 4.280964 8.908572 8.428272 10.720486 5.875515 10.884740 11.556159 9.090380 3.160678 10.042783 6.003431 6.688808 10.226761 9.921933 10.504774 8.921355 9.379419 9.418469 7.195530 10.939831 9.439626 10.620103 9.934599 11.998642 10.242126 9.753453 10.911779 8.212649 1.807025 8.929695 6.653917 9.682869 7.298887 10.149850 7.421744 11.676885 10.316150 6.176269 13.717565 10.053379 9.896853 12.072649 10.346624 -1.362900 NA 9.426643 9.620815 9.637814 TCGA-AC-A62V 58 1 348 NA breast stage iv t2 n1a m1 male 2013 NA yes infiltrating ductal carcinoma 3 black or african american not hispanic or latino NA NA 1 2 NA NA 1 1 2 1 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.6355803 7.8034912 10.5107349 5.1776547 9.7091278 6.4000494 8.9417276 9.8989916 10.7818370 13.3932594 11.5930828 10.2513981 NA 12.6338812 2.3196757 9.8684976 5.5291275 7.8008022 6.1776567 12.1731152 NA 15.0773434 NA 10.5093313 9.9276224 6.2893015 2.8221795 9.5620558 10.7462898 NA 8.3475815 4.9245370 NA 1.3196757 7.6565543 9.1302472 9.3466600 8.0178017 8.8327451 9.0339213 0.3196179 10.3350907 14.5076462 6.7018817 9.5809870 9.6264968 9.8882652 2.8221795 4.7791074 6.3420427 8.6355799 -0.2653446 10.1462241 4.6416038 3.7347096 4.5676002 8.5468906 11.4914779 10.0356377 10.6112301 11.2592548 9.6632315 9.7933814 9.3585947 9.1259566 9.2796777 1.9046190 10.2420122 11.0864806 -1.2653446 10.1583543 8.4437968 0.3196179 2.8221795 10.0137433 9.1879837 10.1499267 8.6295308 3.3785671 5.5548927 10.9450801 10.0189589 9.5532954 9.9459932 0.0158660 0.8661200 0.0020805 -0.4871800 3.6569000 0.4510500 -0.0071958 0.0000000 0.9554100 0.9554100 0.9882500 0.4463000 0.4347900 0.4412200 0.4412200 0.4412200 0.0043054 0.0043054 -0.0457700 3.4957000 0.0196430 -0.0332690 -0.4940200 3.6569000 -0.4728900 -0.5054600 -0.5054600 1.0434000 -0.4944400 -0.4424300 -0.4897400 0.0020805 -0.5253200 0.0000000 -0.0246610 -0.0015243 -0.5132100 0.0000000 -0.0465830 0.4634800 -0.0178030 0.9554100 -0.4927700 -0.4927700 -0.4927700 -0.4927700 -0.0123000 -0.0387140 0.4027700 0.4412200 -0.5032800 -0.5032800 0.0043054 0.0206230 -0.0215100 -0.0457700 -0.0118330 -0.0118330 0.0196430 -1.0774000 -0.0332690 -0.0325870 -0.3024000 -0.4757500 -0.5054600 -0.5115600 -0.0099565 0.1896500 0.6410300 0.419 0.419 0.441 0.441 0.000 0.000 0.000 0.000 0.000 0.385 0.385 0.000 0.000 -0.300 -0.300 -0.476 -0.476 0.000 0.000 3.156 3.657 0.000 0.190 -0.436 -0.436 0.000 0.000 -0.465 -0.465 0.447 0.000 0.000 0.000 0.421 -0.054 0.955 0.955 -0.493 -0.493 0.000 0.000 0.419 0.419 0.441 0.441 0.000 0.000 0.000 0.000 0.000 0.385 0.385 0.000 0.000 -0.300 -0.300 -0.476 -0.476 0.000 0.000 3.156 3.657 0.000 0.190 -0.436 -0.436 0.000 0.000 -0.465 -0.465 0.447 0.000 0.000 0.000 0.421 -0.054 0.955 0.955 -0.493 -0.493 0.000 0.000 9.2305681 NA 5.4212132 12.3528692 13.9637572 7.2552533 10.4766014 NA 10.0012947 2.5420599 11.8289558 12.7754832 5.5160719 1.3196757 1.7346988 7.1483413 3.4895943 9.3677083 11.4168299 9.4778645 9.4386168 -1.2653446 8.0498627 10.5315639 6.8327457 6.8061758 0.7347421 NA 9.3457379 1.9046190 5.0922666 8.9514590 5.4896007 11.2320186 8.3893491 1.3196757 10.0594563 -1.2653446 5.0384932 12.6572046 9.0396349 8.7612367 -1.2653446 3.5926962 8.5895815 6.1693418 6.0475951 0.3196179 2.0566529 5.5432267 -1.2653446 11.4227448 -1.2653446 4.4626348 10.5262831 9.5652283 4.4351552 9.0645094 9.9623291 8.6446062 1.3196757 3.1270224 14.0133441 2.7347205 -1.2653446 0.3196179 2.4351485 15.110798 6.056642 11.106490 12.633881 9.676494 11.044758 12.173115 11.536219 8.693266 9.087860 11.632748 9.736825 6.342043 9.157829 3.944165 11.032203 9.979077 9.6355799 12.6915430 5.9635319 12.8973381 7.7845616 2.9826377 8.7899956 8.1982373 8.5051129 6.5802028 4.1941422 11.5930828 8.7556931 2.3196757 8.5323746 8.7248170 8.1148927 8.1075780 8.2225529 9.5770636 4.5676002 11.9827890 3.0566355 1.7346988 11.7543664 9.3466600 9.7233978 11.0324892 10.7148527 8.8484552 10.0464615 9.2612123 6.3567653 -1.2653446 8.9667981 6.3567653 8.6355799 0.7347421 10.1462241 6.5988996 10.2104466 8.5468906 6.3640699 13.5581799 10.4190235 9.4035981 10.8287909 10.1178773 NA 2.8631654 8.8034915 7.7004973 8.3803714 TCGA-AC-A62X 72 0 NA 417 breast stage iia t2 n0 mx female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.31783e-06 3.467973e-07 46 26 2 16 10 8.8365762 7.7074578 10.2866608 7.1066017 8.4118711 9.6570111 9.0465268 9.9058390 11.8260264 12.2323933 11.5137857 9.9773014 1.5432484 12.4981922 2.9838418 10.1891846 7.0846426 9.7160536 6.3797700 6.2116469 NA 11.9100595 8.3652708 9.0882996 11.7267271 9.2045381 -1.2639580 9.4874580 10.7662363 -0.2641313 9.1994385 6.9502328 0.7359554 3.2594834 10.2461837 10.1093229 9.2799126 8.3923389 10.2672955 10.9641315 8.3761588 6.2828086 14.4244922 5.9044359 11.1702816 9.4882947 10.6791614 5.9158220 3.6428055 9.1798937 12.3709519 -0.2641313 10.9401795 3.4908011 7.6842816 3.7803101 7.8496559 11.7646834 10.0544569 10.7288524 12.2159468 8.7762037 10.9608201 10.6589035 10.8938924 9.6570111 3.9034336 11.7825265 7.0802099 NA 10.8945237 9.8703404 3.4407795 3.0578488 11.3281374 8.5954488 9.7693370 9.9257385 3.1282274 7.4672330 11.2844951 13.1638815 10.3990273 10.5636537 1.47860000 1.47930000 -0.00816370 0.98390000 -0.12109000 0.09492600 1.16630000 1.90010000 0.82437000 0.82437000 0.52503000 1.06080000 1.57710000 -0.02821900 -0.00954390 -0.00954390 0.48475000 -0.04712600 -0.58520000 -0.55477000 -0.50753000 -0.51167000 0.03453500 0.03453500 0.00745580 0.00745580 0.00083064 0.08045500 -0.47014000 0.48239000 -0.03204300 -0.04503600 0.00041462 0.50411000 -0.60129000 -0.60129000 1.16630000 1.90010000 0.85700000 -0.57861000 0.48475000 0.57898000 3.22850000 3.22850000 -0.12187000 -0.06115300 1.57710000 -0.53825000 0.01600500 -0.00954390 -0.04450300 0.02819900 0.48475000 -0.04712600 -0.04712600 -0.58520000 -0.55477000 -0.55477000 -0.52716000 -0.51167000 -0.51167000 0.03453500 -0.02176200 0.02651200 0.00745580 -0.51476000 1.91310000 0.08391900 0.14863000 0.994 0.994 0.000 0.000 0.455 0.455 -0.585 -0.554 -0.508 0.644 -0.512 -0.465 0.000 0.000 0.000 0.000 0.000 0.482 1.479 -0.537 -0.537 0.000 0.000 0.000 0.000 0.000 0.984 -0.127 -0.127 0.000 -0.601 0.857 1.900 -0.579 0.485 0.824 0.824 3.229 3.000 0.151 0.151 0.994 0.994 0.000 0.000 0.455 0.455 -0.585 -0.554 -0.508 0.644 -0.512 -0.465 0.000 0.000 0.000 0.000 0.000 0.482 1.479 -0.537 -0.537 0.000 0.000 0.000 0.000 0.000 0.984 -0.127 -0.127 0.000 -0.601 0.857 1.900 -0.579 0.485 0.824 0.824 3.229 3.000 0.151 0.151 8.5544964 3.6428055 7.0890606 11.3140508 11.9080289 6.5166834 11.7445177 8.7734610 8.5117874 NA 11.6837336 12.1093393 6.4224147 NA 1.0578315 7.8418228 4.5688043 10.6809920 10.9266646 10.9123988 11.2818438 0.3208890 8.4030257 10.0067932 5.8754655 6.5560937 -1.2639580 1.0578315 11.1645359 3.7803101 6.8754655 7.4363534 9.8233768 10.2980563 10.3734445 NA 9.4118711 3.8233723 6.4638349 11.4514471 6.9158232 10.9120872 NA 2.9058322 8.5512972 1.7359120 1.0578315 -0.2641313 1.0578315 3.1282274 4.2594759 11.7387290 6.2905037 7.6062786 11.7513291 10.2377512 3.7359120 9.2014805 13.4502132 5.8754655 0.7359554 1.3208890 10.1752254 2.0578315 9.3048202 1.3208890 8.7939056 9.879195 8.388759 7.818063 12.498192 9.484107 10.855179 6.211647 5.915822 8.000357 10.596225 13.427221 11.433750 9.179894 6.477381 1.905851 8.245689 9.065710 11.109595 11.753592 4.463832 14.379598 8.826026 2.320889 8.902077 8.676962 9.619772 2.905832 3.780310 11.513786 12.743905 NA 9.641301 11.743467 8.014247 10.230270 9.499126 10.163227 5.974318 9.688655 6.796609 3.057849 9.791393 9.279913 10.082428 10.417592 11.471258 10.576692 11.406128 9.878659 7.925738 4.713195 10.030879 5.642806 12.370952 8.807376 10.940179 9.094565 11.110138 7.849656 7.339540 13.927436 10.198927 10.380672 13.348552 11.669973 -1.263958 NA 10.584928 9.000357 8.672552 TCGA-AC-A62Y 79 0 NA 530 breast stage iib t2 n1 mx female 2012 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 5 NA NA 4 1 3 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456549e-06 4.508365e-07 17.5438596491228 33.3333333333333 3.50877192982456 22.8070175438596 22.8070175438596 10.1761531 9.2226631 10.9637023 7.8319615 7.7788177 10.0073836 10.0359755 10.5128027 9.9253970 14.5295387 11.7927909 10.5038241 -1.2792838 12.1396009 1.8907580 11.3921458 6.6156443 7.6126098 9.8838465 12.9579611 -1.2792838 13.5108689 7.6486042 9.6067052 10.0822214 7.7264505 -0.2791087 11.9785216 11.5815249 1.5281712 7.5378093 7.9253972 NA 3.5788059 9.8488202 10.4064507 9.7542488 10.3794836 9.6596704 10.9103416 2.1802434 11.4162717 13.8843183 7.0539367 9.8016101 9.8391181 9.8449472 2.9687543 6.3355351 8.1365677 11.5404063 0.3057955 9.7720348 4.9876119 6.7542488 5.1965598 10.2301061 11.7339741 10.5370096 11.8092829 12.8661212 8.5616038 10.3705311 10.3493216 11.5852055 9.7306546 4.4212637 11.5257636 10.6574639 NA 10.0838655 8.7080900 2.1213802 5.2443886 9.8175411 9.3888243 9.2541556 9.0404980 2.7208257 9.3619745 13.3795952 12.8391181 9.7073790 9.4020643 0.76102000 0.76102000 -0.00650500 0.01419000 -0.39432000 0.00000000 -0.22158000 -0.22158000 -0.02201200 -0.02201200 -0.02178400 -0.42117000 -0.42298000 0.37611000 0.24191000 0.24191000 -0.00512270 -0.00152430 -0.43669000 0.38833000 -0.04115900 -0.43778000 -0.43778000 -0.43778000 0.31386000 0.31386000 0.31386000 0.71246000 0.08710000 0.08710000 0.36231000 -0.00650500 -0.39432000 -0.40474000 0.00055459 -0.00299300 -0.22158000 -0.22158000 0.00346870 0.33383000 0.32785000 -0.03802300 -0.02246900 -0.02246900 -0.02246900 -0.02246900 -0.42298000 -0.42298000 0.29089000 0.24191000 0.24191000 0.24191000 -0.00512270 -0.02492900 -0.02492900 -0.39575000 0.38833000 0.38833000 -0.04115900 0.30538000 -0.43778000 -0.43778000 -0.00470790 0.31386000 0.31386000 0.71246000 0.34892000 -0.46121000 -0.46121000 -0.405 -0.405 0.376 0.376 0.000 0.000 -0.396 0.388 0.000 0.467 0.467 -0.438 -0.438 0.121 0.000 0.314 0.314 0.000 0.674 0.712 0.712 0.349 -0.461 0.362 0.362 0.000 0.000 -0.394 -0.394 0.000 0.000 -0.222 -0.222 0.328 0.328 0.000 0.000 0.000 0.000 0.000 0.000 -0.405 -0.405 0.376 0.376 0.000 0.000 -0.396 0.388 0.000 0.467 0.467 -0.438 -0.438 0.121 0.000 0.314 0.314 0.000 0.674 0.712 0.712 0.349 -0.461 0.362 0.362 0.000 0.000 -0.394 -0.394 0.000 0.000 -0.222 -0.222 0.328 0.328 0.000 0.000 0.000 0.000 0.000 0.000 9.6201828 NA 5.1965598 10.2987267 10.4852828 7.4209884 11.8873028 7.7984161 9.5495575 -1.2792838 12.1852440 11.6470811 3.5788059 5.2599842 1.7208475 7.5631764 5.0958654 11.1881767 11.1515398 10.5733554 9.1884313 6.5663159 8.5647470 9.3547294 5.6034691 8.0108447 4.0783793 NA 11.0511826 5.4487457 5.6156429 7.9758543 4.4212637 10.1538427 9.6793786 5.9969513 9.3225968 NA 7.8832170 11.5751099 9.5394082 8.0359752 -1.2792838 -1.2792838 8.3914820 2.4212637 5.4073256 NA 4.2443848 3.7208257 2.4212637 10.1879220 -0.2791087 6.2754150 10.7232893 9.8378195 7.1554538 9.2887819 12.7978085 9.1302169 3.0427494 4.1470869 11.7769555 1.0427844 NA 3.1802593 1.8907580 12.529478 6.379037 7.880697 12.139601 9.978803 11.032290 12.957961 11.740938 9.245368 10.255615 13.679560 11.229859 8.136568 8.006228 -1.279284 6.585012 11.472579 10.3866059 12.4676551 7.1761532 13.3590299 10.3327728 5.2443886 8.1023689 7.3646819 10.1159744 7.2561011 9.9496446 11.7927909 6.2754150 NA 10.7932935 4.3057882 7.9343189 10.1653232 10.1072273 11.1663581 7.4890106 9.3565440 9.8208311 4.0062262 11.7272134 9.7542488 11.2585296 9.8907508 11.3142170 9.6179150 10.6688280 9.6757493 7.8029751 2.3057955 8.8657391 7.5378093 11.5404063 1.3057955 9.7720348 6.2677212 10.3221324 10.2301061 7.4622929 13.1403911 10.6822756 10.7239924 12.2745752 10.1596177 0.3057955 -1.2792838 9.9496446 10.1007458 8.7963051 TCGA-AC-A6IV 47 0 NA 568 breast stage iib t2 n1 mx female 2012 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 3 NA NA 1 4 4 3 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1696676 9.5693908 11.0124280 8.9219641 8.7777422 9.1624812 9.2924330 9.8056887 10.3063564 9.2404837 11.0312902 10.3002303 1.1017845 12.8226707 4.3497120 10.5175270 6.0942509 8.9283336 9.3281974 12.1211443 0.8387501 13.7876290 5.0714109 9.7792876 10.1448124 5.9005263 0.1017845 10.5329345 9.0206483 3.4710183 8.3685719 7.3654458 -0.4831780 5.1461786 9.7894525 9.6633914 9.8716230 9.7818516 9.2146591 10.8171752 2.9762536 9.8967424 15.0078929 9.4981046 9.6075835 10.8683141 10.8760232 6.5936376 5.1606782 8.9166346 11.9010668 1.6867470 10.9808578 7.1786011 7.2344994 6.2717095 10.1148752 11.9236920 10.5062172 12.0353529 12.6841624 8.2932555 10.8194616 10.9260333 10.8197471 10.7582101 5.0086751 11.7821447 11.1710112 0.5168220 10.8194616 8.6954876 4.1895320 7.0559819 10.8569510 10.1218391 10.6892502 9.4304601 5.0714109 8.6627549 12.7770807 12.7593269 9.9509297 10.1808254 0.1165300 0.2364300 0.0034687 0.0000000 -0.0011087 0.0034687 0.0921700 -0.0025556 -0.0103700 -0.0103700 -0.0103700 -0.0158790 -0.0318490 -0.0453640 -0.1566200 -0.1566200 -0.2574500 0.0946730 0.0140510 -0.0042929 0.0024969 0.0034687 0.0034687 0.6948400 -0.0070576 -0.0070576 -0.0070576 0.0068044 -0.2503100 0.1165300 -0.0136770 0.0000000 -0.0011087 -0.0011087 0.0034687 0.0034687 0.0921700 -0.0025556 -0.0033243 -0.0217840 -0.0217840 -0.0103700 0.0013672 0.0013672 0.0013672 0.0055529 -0.0318490 -0.0318490 -0.0453640 -0.1566200 -0.1566200 -0.1566200 -0.2574500 0.1789000 0.1789000 0.0140510 -0.0042929 -0.0042929 0.0024969 -0.2458200 0.0034687 0.0034687 0.0015280 -0.0070576 -0.0070576 0.0068044 -0.0022168 -0.2478800 -0.2478800 0.000 0.000 0.000 -0.111 -0.257 0.000 0.000 0.000 0.000 0.221 -0.248 0.000 0.000 0.000 0.000 0.000 0.000 0.117 0.117 0.000 0.000 0.000 -0.248 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.111 -0.257 0.000 0.000 0.000 0.000 0.221 -0.248 0.000 0.000 0.000 0.000 0.000 0.000 0.117 0.117 0.000 0.000 0.000 -0.248 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.0265976 -1.4831780 7.3716913 11.3988925 11.6095799 7.8386606 10.6328417 10.0497289 8.7525499 4.3241769 12.2095472 11.8138005 6.2241812 4.9430868 4.9091394 8.1678742 5.1315319 11.1674257 11.1615803 10.3875727 8.7647502 2.9762536 8.1732474 10.3310046 8.1786006 10.5505898 1.8387501 0.1017845 10.8051120 7.7016981 7.8677618 7.6435272 7.4207047 11.1606203 10.4608027 5.5936376 9.2464435 0.1017845 8.8079934 12.3262894 9.1980612 8.7987527 -1.4831780 3.6867470 8.0325224 -0.4831780 6.2447425 0.8387501 6.8432528 4.9163333 4.1315319 10.0666074 0.1017845 9.1971823 10.3377994 9.8716230 7.6486797 9.9690640 12.4152351 10.2220231 4.4237126 4.9430868 12.6158417 3.5612161 NA 3.1606782 4.0086751 13.955689 5.802224 8.528050 12.822671 10.391620 9.992050 12.121144 13.696965 8.565895 10.201571 13.096963 11.228275 8.916635 8.613538 2.838750 8.012678 11.852353 11.4118299 12.1838233 6.9430880 13.0541558 8.6042856 8.1204489 9.2015714 8.1821584 10.4746430 8.5474899 8.4983901 11.0312902 7.9783020 1.5168220 10.5509338 7.3654458 7.0873239 11.0545264 10.8308394 10.4804413 8.4486681 9.3281974 11.5111762 6.5224466 12.2390325 9.8716230 10.5748144 9.8085689 11.1427598 10.8885994 10.5481793 10.4688359 8.4578705 NA 9.5487375 7.0443001 11.9010668 6.0866776 10.9808578 7.7789175 11.3249181 10.1148752 7.1498182 13.8951176 9.8716230 10.1379588 12.5097610 10.8183189 2.9762536 0.8387501 10.1116138 9.4731988 10.2878995 TCGA-AC-A6IW 73 0 NA 413 breast stage iia t2 n0 (i-) mx female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 5 4 1 2 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.056056 8.505890 10.714207 8.295122 9.192056 9.426720 9.131447 10.036796 12.276397 11.450732 10.315607 9.905887 1.944933 11.190869 1.681899 9.644782 9.046458 7.933605 11.115888 3.681888 0.681854 6.612622 8.733910 10.231328 10.579126 5.974667 1.529871 11.925317 11.030614 2.529871 9.627915 6.811169 NA 2.167326 8.312699 9.833663 7.272847 10.003814 8.998394 9.801864 1.529871 6.211707 14.510300 9.040599 11.774377 10.592079 9.709239 4.404351 NA 8.804973 9.069041 NA 10.127314 6.067316 7.519829 6.108150 10.635791 11.741636 10.825779 9.988859 12.128142 6.147860 10.337595 10.475616 9.945390 10.339025 4.087879 11.542507 8.386481 1.529871 10.314881 10.265345 4.857090 4.883518 12.318510 9.616756 11.273782 9.729555 8.129796 3.167310 12.278448 11.545298 9.486662 9.428736 1.20070000 0.28041000 -0.01575400 0.62405000 -0.30553000 -0.04089400 0.31963000 -0.01857500 1.23240000 1.23240000 0.93202000 0.18782000 -0.14824000 -0.00189930 -0.18102000 -0.17829000 0.70831000 0.00416490 -0.15529000 -0.17032000 -0.09684200 0.00373990 0.00373990 0.00373990 0.44951000 0.41747000 0.10307000 0.19583000 -0.19688000 0.26733000 -0.18232000 -0.00678790 -0.30553000 -0.15989000 -0.04089400 -0.68342000 -0.45469000 -0.01857500 0.09143800 0.18907000 -0.04170900 0.35707000 -0.22164000 -0.18811000 -0.18811000 -0.18811000 -0.17766000 -0.18761000 0.00805010 -0.18102000 -0.18867000 -0.24767000 0.01655900 -0.00402280 0.00040937 -0.17171000 -0.61422000 -0.19137000 -0.10237000 -0.22215000 0.00373990 0.00373990 0.13198000 0.44951000 0.10307000 0.35137000 0.21115000 -0.01189300 0.34664000 -0.008 -0.183 -0.178 -0.178 0.000 0.000 -0.172 -0.191 -0.102 -0.214 -0.214 0.000 0.000 0.132 0.132 0.450 0.450 0.267 0.267 0.196 0.196 0.211 0.000 0.002 -0.168 0.180 0.180 -0.306 -0.160 -0.209 -0.209 0.000 0.000 0.116 0.000 0.756 0.756 -0.188 -0.188 0.000 0.000 -0.008 -0.183 -0.178 -0.178 0.000 0.000 -0.172 -0.191 -0.102 -0.214 -0.214 0.000 0.000 0.132 0.132 0.450 0.450 0.267 0.267 0.196 0.196 0.211 0.000 0.002 -0.168 0.180 0.180 -0.306 -0.160 -0.209 -0.209 0.000 0.000 0.116 0.000 0.756 0.756 -0.188 -0.188 0.000 0.000 7.24565348 0.35997089 2.94491465 11.13803470 12.21735545 6.90058911 11.17933837 8.72379676 9.08462478 -0.64002911 12.99170304 12.27582202 3.75227761 -1.64025395 2.75227761 9.81065341 5.06039764 11.07097919 11.21618856 11.29254141 9.19994859 NA 8.25931439 10.58395922 7.89523293 4.42605001 NA -0.64002911 10.49598740 1.94493339 7.56697189 8.28179838 9.95521500 10.73683451 10.65141609 5.59836223 10.21638308 4.71751193 5.89911519 12.89541521 8.37397788 6.77358497 -0.64002911 1.52987091 8.20544774 2.06039331 -0.05514155 -0.05514155 6.99658195 2.68692627 6.30832447 11.73798139 8.26985042 8.31705981 11.23417047 10.96451076 6.41523980 10.04689576 13.93558544 10.15599722 6.44742050 5.47889740 10.24527258 2.44742050 7.37954819 4.94491934 6.94115797 11.568715 9.038558 7.581545 11.190869 9.642467 11.400419 3.681888 10.166104 8.419843 10.890537 14.276677 13.784157 8.804973 8.042952 2.752278 8.400247 9.908298 10.149491 11.712139 5.325743 14.160754 9.992498 7.345799 9.377462 8.398877 8.904507 8.373978 6.167312 10.315607 10.584261 NA 9.933131 9.110664 8.799238 13.118961 11.147044 10.081057 8.397504 9.912627 6.974667 6.974667 10.383154 7.272847 10.465211 10.143365 11.599705 11.130415 10.542042 10.133509 7.354311 NA 9.526290 5.230322 9.069041 7.074204 10.127314 2.266846 10.808107 10.635791 8.015005 16.254195 10.912867 10.355725 12.030503 12.094667 5.290693 2.060393 10.075062 9.188887 8.231863 TCGA-AC-A6IX 49 0 NA 373 breast stage iiic t2 n3a mx female 2013 NA yes infiltrating lobular carcinoma 19 white not hispanic or latino NA NA 1 2 4 2 6 4 4 9 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1895849 9.7354360 11.3224540 9.1864285 8.5996592 9.6985621 10.0698977 9.5590948 10.2461165 9.0931989 11.6618577 10.5295073 1.5443865 12.5117833 3.4512639 9.6858454 7.1882328 8.7477247 9.6384546 12.4421278 3.0679312 13.4686791 6.5556045 9.5205399 10.7397491 6.9622297 1.1293490 12.0095160 10.0022707 4.4270228 7.9215875 7.4810147 -1.4556135 4.6941224 9.4868913 10.2487128 9.2756960 11.0796522 10.2348114 11.1927344 -0.4556135 11.0686737 14.3458579 9.7427667 10.6730156 10.6688214 10.4197423 4.9366945 5.8842267 8.7067681 11.2733602 -1.4556135 10.8814412 5.8389971 6.1517066 5.0201110 10.2769683 11.9966181 10.6401036 11.9180577 12.7667945 8.6463524 10.2735728 10.0254296 11.4444890 10.4050759 4.6736582 11.5925231 11.8252926 -0.4556135 10.5764226 8.4662176 4.1347384 5.5101613 10.2016954 10.0742954 10.2761202 8.7055087 2.6318493 8.7143019 14.2787954 11.5119634 10.4000240 9.6305130 2.6609000 0.4825100 0.0079175 -0.0078863 -0.0102790 -0.0037395 0.0087528 -0.0150220 0.5168200 0.0220240 -0.4915200 -0.4731100 0.0196430 0.0125160 2.1852000 0.8532400 0.0080567 0.0080567 -0.0085766 0.0020805 0.0308730 0.0525250 -0.4496400 0.0545180 -0.4161900 0.0623650 0.0722530 0.0386300 -0.4391800 0.0000000 -0.0073339 -0.4836500 0.0736900 -0.0209610 -0.0037395 -0.0037395 0.0087528 -0.0150220 -0.0150220 0.0083351 -0.0067813 0.0218840 0.0202030 0.0202030 0.0202030 0.0202030 0.0196430 0.0196430 0.0125160 -0.4632300 -0.4759200 -0.4722600 0.0080567 0.0080567 0.0080567 -0.0085766 0.0301690 0.0301690 0.0308730 -0.4694000 -0.4530800 -0.4496400 -0.4737400 -0.4161900 0.0623650 0.0386300 -0.0073339 0.0673750 -0.4504900 -0.473 0.000 -0.486 -0.486 0.000 0.000 0.000 0.000 0.000 0.000 -0.469 0.000 0.000 0.000 -0.481 -0.416 0.000 0.000 0.453 0.000 0.000 0.000 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.473 0.000 -0.486 -0.486 0.000 0.000 0.000 0.000 0.000 0.000 -0.469 0.000 0.000 0.000 -0.481 -0.416 0.000 0.000 0.453 0.000 0.000 0.000 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7586959 2.5443865 7.1255778 11.3776623 11.3400107 7.1336539 11.6377944 9.5244878 8.9669778 4.0989669 11.9214518 11.4615456 4.5443741 6.2097126 4.5216538 8.0160522 4.2722995 10.9651266 12.0630300 12.1223957 9.4422224 3.0038001 8.3693356 10.3104917 7.3224537 9.6600708 1.7143115 NA 10.7477249 6.7827820 7.4239605 8.5259440 7.1918350 10.9317130 10.0922353 5.0679398 8.3109058 0.8663146 8.4391947 12.1107877 9.0160522 8.5087178 0.5443865 5.2858424 8.4407093 1.5443865 4.7342002 0.8663146 5.9706420 4.6951420 4.3257390 10.5802069 -1.4556135 8.5130438 10.4296919 9.9112455 5.3772661 9.9991902 12.6974538 9.4706729 2.7143115 3.5887686 11.9879680 1.8663146 -1.4556135 2.2448262 2.5443865 13.489469 6.588772 8.419358 12.511783 10.536253 10.854422 12.442128 10.519508 9.840593 10.535190 14.161155 9.528083 8.706768 7.829779 2.129349 7.591501 10.977962 11.308626 12.833387 6.678803 13.444438 9.025167 7.295921 8.731729 7.188233 10.688532 7.383581 8.534481 11.661858 7.504379 2.631849 10.846730 5.244815 6.764320 11.131217 10.213705 10.978223 7.414742 9.178280 10.636804 7.258623 11.190353 9.275696 10.687760 9.266330 11.119207 10.458014 10.529507 10.614162 8.282469 8.848158 9.712729 7.318669 11.273360 7.417821 10.881441 7.209713 10.728815 10.276968 7.405464 13.936325 10.056623 10.055635 12.216913 10.614833 3.003800 2.338282 10.436920 10.223417 10.083536 TCGA-AC-A6NO 43 0 NA 51 breast stage iib t2 n1a mx female 2011 NA NA infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 2 1 1 2 4 4 6 5 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.5954924 8.9606409 11.9404631 8.5348771 8.5758179 9.6789374 10.9302674 9.5705760 10.2126605 12.6246000 10.9566279 10.1069651 6.2160221 13.3597035 3.5683240 9.6955441 8.7044601 8.1928146 9.3523039 12.7362434 4.8902521 14.2836850 5.9282187 10.0070378 10.8134008 5.5069224 NA 8.1232399 9.5862455 2.5683240 9.3876512 7.0918860 0.2463473 3.8708874 10.0649777 9.5884701 10.3156215 10.5940168 10.0526766 11.0705587 3.1208661 11.7475692 14.5452456 8.8420385 10.3743897 11.1229124 10.8086379 4.2463929 6.3893534 8.2482730 10.9288049 -1.3386152 10.3644713 2.6614304 4.0189813 4.2761393 9.9839245 12.0967126 10.8995391 13.4864414 12.7904744 8.5194141 11.0126483 10.5770509 10.8216195 11.0104377 4.8512593 11.1749138 11.0073926 -1.3386152 10.3343002 8.7971424 5.4080155 2.9833676 11.3549199 9.9782802 10.1572879 9.3961426 1.6614304 9.9205878 12.2475690 11.2976044 9.9566279 10.1259787 1.56570000 1.62690000 -0.00636680 -0.01146700 -0.00387790 -0.00429290 -0.00722080 -0.00470790 0.22376000 0.22376000 0.22376000 0.00055459 0.00055459 -0.00277070 -0.00277070 -0.00277070 -0.00263220 -0.00263220 -0.00691950 0.00052636 0.00527490 0.00736090 0.00736090 0.00736090 0.01223700 0.01223700 0.01223700 0.73322000 0.00285380 -0.00512270 0.00305220 -0.00636680 -0.00387790 -0.00387790 -0.00429290 -0.00429290 -0.00722080 -0.00470790 -0.00470790 1.01010000 0.49372000 0.22376000 -0.00097017 -0.00097017 -0.00097017 -0.00097017 0.00055459 0.00055459 -0.00277070 -0.00277070 -0.00277070 -0.00277070 -0.00263220 -0.00263220 -0.00263220 -0.00691950 0.00052636 0.00374650 0.00527490 -0.76492000 0.00736090 0.00736090 0.37680000 0.01223700 0.01223700 0.72001000 0.00527490 -0.50225000 -0.50225000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.210 -0.732 0.000 0.000 0.380 0.380 0.000 0.000 0.000 0.163 0.724 0.724 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.720 0.494 0.224 0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.210 -0.732 0.000 0.000 0.380 0.380 0.000 0.000 0.000 0.163 0.724 0.724 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.720 0.494 0.224 0.224 0.000 0.000 0.000 0.000 8.2482730 NA 4.8111781 11.2795890 12.0635124 8.4150678 11.9495781 8.2677642 9.2312980 NA 10.8194114 10.8412115 3.3618666 0.6614760 4.2761393 8.3739600 3.9468338 9.7268491 11.1025616 11.2611134 9.0200841 2.4687918 7.7907160 10.5600343 6.4163213 4.4163196 0.2463473 -1.3386152 10.7816708 4.7275230 5.8998378 9.0134765 7.5501765 11.1955413 10.8851331 3.1208661 9.7302113 -1.3386152 8.0299393 12.4055310 10.3039360 7.5471290 NA -1.3386152 8.9765825 3.3052847 4.2761393 NA 4.0189813 6.0752310 2.8313503 10.6483416 NA 8.0079467 10.7068513 9.7037764 3.9093603 8.1432322 11.1515317 6.8660042 3.1208661 2.7488905 11.6644237 3.1208661 NA 1.8313503 2.5683240 13.484622 5.899838 9.116760 13.359704 10.277982 11.376108 12.736243 12.368792 9.021973 10.146256 13.069763 10.611624 8.248273 8.528712 3.519416 6.880601 11.431684 11.266912 12.786604 7.344427 13.247741 8.793290 5.455850 9.502211 8.936394 10.889993 6.455848 8.171208 10.956628 6.826340 NA 11.320537 8.563808 7.919858 10.966355 10.413395 10.349683 9.110416 9.441973 10.800665 4.638711 11.624054 10.315621 10.102821 10.513962 10.765376 10.034298 9.934063 10.717393 8.949145 NA 9.991515 7.048330 10.928805 5.615628 10.364471 5.738249 11.404702 9.983924 7.743635 14.116632 10.270150 9.954330 12.976653 11.182297 1.468792 -1.338615 9.820674 10.091886 10.023377 TCGA-AC-A7VB 51 0 NA 250 breast stage iia t1c n1a mx female 2013 NA yes infiltrating ductal carcinoma 3 black or african american not hispanic or latino NA NA 1 2 NA NA 1 1 1 8 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6318791 9.1083838 11.7388989 9.0960924 9.6082718 9.2095504 10.9792322 9.0648977 9.1076186 12.7905852 9.5968671 10.3153954 -0.7727518 14.7510002 2.1341552 9.5946846 6.4318402 8.1505972 9.2223303 13.4484792 6.7271159 14.6499095 1.9277069 9.4590729 11.6965300 6.4893647 2.3972006 5.5033933 10.8049346 -0.7727518 6.8009167 6.5536999 NA 3.3565523 10.1148711 8.5241859 8.5748913 9.0281696 10.0569925 10.9135514 2.5492009 11.2665315 13.5800374 9.4278129 11.7897483 10.3996973 10.5036850 5.7191232 8.1416550 8.5693445 9.6125930 NA 10.5581866 2.6867022 2.7508423 2.6195773 9.2349980 12.2072308 10.4686571 10.6704723 12.9704211 7.9568907 10.3371004 10.4187670 10.9052096 11.1352870 5.2045516 11.3644210 11.8117625 -0.1877072 10.1675834 8.2202080 4.0384801 3.3972006 11.0165996 9.4590910 11.1870906 9.3047531 1.0346383 6.1281366 10.7571883 8.9509306 10.3968816 10.0968636 0.00152550 0.79045000 0.00555290 -0.00995650 0.00000000 0.01964300 -0.00318590 0.00055459 3.65690000 -0.84227000 1.53330000 0.02511000 -0.00083160 0.00638710 0.03793800 0.82118000 0.01810300 3.65690000 -0.85480000 0.86533000 0.01908300 -0.83122000 0.83058000 0.83058000 -0.78117000 0.03242200 0.03242200 0.02421300 0.00152550 0.00152550 -0.01023200 -0.87557000 0.00000000 0.00555290 -0.00990290 -0.01243800 -0.00318590 0.00055459 -0.00816240 -0.00263220 -0.00097017 -0.86026000 0.00552710 0.00552710 0.01178600 0.01178600 -0.00083160 0.00972760 0.00638710 0.03793800 -0.86876000 0.00875280 -0.86113000 -0.86287000 -0.86287000 -0.85480000 -0.85186000 0.81981000 0.01908300 -0.85361000 -0.83122000 0.83058000 0.02384700 -0.79453000 0.03242200 -0.87767000 -0.84891000 -0.83519000 -0.83519000 0.000 0.000 0.000 0.000 -0.831 -0.831 -0.855 0.000 0.000 0.000 -0.851 -0.001 0.831 0.000 0.000 -0.765 -0.765 0.000 0.000 0.000 0.000 -0.854 -0.835 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.825 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 -0.831 -0.831 -0.855 0.000 0.000 0.000 -0.851 -0.001 0.831 0.000 0.000 -0.765 -0.765 0.000 0.000 0.000 0.000 -0.854 -0.835 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.825 0.000 0.000 0.000 -0.110 -0.110 8.8783213 5.7586523 4.4560899 11.2449481 12.1204765 8.7663218 11.2226836 7.0211010 9.4696579 1.3972006 11.5330465 10.9265016 6.0020566 1.2272482 4.7664308 7.6764183 4.1814683 10.1300217 11.8220609 10.8143441 9.6928362 6.1697847 8.2510241 6.5935913 5.8493213 8.8979259 2.3972006 NA 9.1770966 5.7971245 5.7586523 8.4668681 4.3357976 10.8043563 9.9611325 0.8122107 9.9813221 NA 5.4071794 11.5542609 9.0249313 8.2244494 NA 1.0346383 9.1923325 NA 4.2045477 2.0346383 -0.1877072 7.2197271 -0.1877072 9.6825970 NA 5.8854816 10.7427232 8.8593562 1.9277069 6.7390218 13.2401998 5.5218893 2.4751887 2.3972006 13.6494002 3.2716647 NA 1.8122518 1.0346383 13.580063 6.610975 9.096864 14.751000 9.941086 10.555384 13.448479 13.382207 10.159064 10.569622 11.701736 11.152268 8.569345 8.727116 1.812252 8.535609 10.471336 11.4079560 13.1690968 5.7350645 13.4009063 9.0743272 2.6867022 9.0554064 9.9329021 10.9622291 4.4367215 9.1022511 9.5968671 9.3597695 0.8122107 11.4952269 5.7971245 8.8388478 8.4488568 10.3484794 11.2049074 7.3693766 10.4671666 8.4158588 3.2272636 12.5990253 8.5748913 9.5178646 10.6345375 12.3168858 9.0546125 10.6337405 11.0398482 8.4656746 -0.1877072 9.2441685 5.2606919 9.6125930 3.0852547 10.5581866 2.9277069 11.1268155 9.2349980 8.2016843 13.5920644 10.5025213 9.4769758 12.0853479 9.7985484 -0.7727518 -0.1877072 9.8584468 10.5968671 9.7808991 TCGA-AC-A7VC 56 0 NA 1 breast stage iib t3 n0 mx female 2013 NA NA metaplastic carcinoma 0 white not hispanic or latino NA NA 4 4 NA NA 5 2 4 2 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.7717153 8.8460250 11.0513987 6.4702505 8.7634478 7.5152607 5.1533960 10.2408570 11.5013457 6.4600561 9.4791139 10.1350865 1.6424243 10.5047596 3.1278644 12.5346715 6.7042080 7.8002845 8.8731731 5.4290301 NA 6.5872900 0.9055049 10.6091338 3.7799321 4.0209466 -0.6794576 8.7149667 10.7634476 5.2273945 6.6514206 7.6955436 NA 5.8282990 8.8499345 9.1549753 8.8596631 7.7881095 8.9893891 9.3247247 NA 4.5299583 15.6474076 8.0715793 10.4923065 10.1382873 8.9858399 4.8750920 -0.6794576 8.3892824 10.0295879 1.3204847 10.2739731 4.1278561 7.9425561 5.9643594 8.6955436 12.2063911 10.0594409 12.4985465 11.6840914 7.8401403 10.0287259 10.3070573 9.8203500 10.6271355 2.1278644 11.0783108 9.7520017 NA 10.4696161 9.2790568 8.9227206 2.9054664 11.5945910 10.0475737 10.3607939 8.2213711 -0.6794576 6.7128214 14.1936598 11.7240488 9.8322568 10.8932044 0.5362600 0.3218900 -0.0908900 0.0827650 -0.3269000 0.2071700 0.2277700 0.2381400 0.3649300 0.3649300 0.9614400 -0.3244200 -0.1074900 -0.1409100 -0.1409100 -0.1409100 0.0044411 0.0044411 -0.1577100 -0.2649200 0.0782940 -0.0033186 0.0015380 0.0015380 -0.0178030 -0.0178030 -0.0178030 0.0706730 0.5362600 0.5362600 -0.5538100 -0.0908900 -0.3269000 -0.3162200 0.2071700 0.2071700 0.2277700 0.2381400 0.2086700 0.2741800 0.1766400 0.3649300 -0.2269900 -0.2269900 -0.2269900 -0.1574500 -0.1074900 -0.1074900 -0.1409100 -0.1409100 -0.1409100 -0.1409100 0.0044411 0.0044411 -0.0198630 -0.1963700 -0.2649200 -0.2649200 0.0719220 -0.1584800 -0.0033186 0.0015380 -0.3007500 -0.0689310 -0.0178030 -0.0091286 0.0632230 0.0059700 0.0059700 -0.324 -0.107 -0.141 -0.141 0.000 0.000 -0.158 -0.265 0.000 -0.158 -0.158 0.000 0.000 -0.301 -0.301 0.000 0.000 0.536 0.000 0.000 0.000 0.000 0.000 -0.547 -0.547 0.000 0.000 -0.327 -0.327 0.207 0.207 0.238 0.238 0.209 0.209 0.365 0.961 -0.227 -0.227 0.000 0.000 -0.324 -0.107 -0.141 -0.141 0.000 0.000 -0.158 -0.265 0.000 -0.158 -0.158 0.000 0.000 -0.301 -0.301 0.000 0.000 0.536 0.000 0.000 0.000 0.000 0.000 -0.547 -0.547 0.000 0.000 -0.327 -0.327 0.207 0.207 0.238 0.238 0.209 0.209 0.365 0.961 -0.227 -0.227 0.000 0.000 8.4929315 5.5299583 8.8002845 11.3074128 11.2423451 6.8374652 9.2168365 8.8813719 8.2512414 NA 12.7020471 12.0544008 3.1278644 NA 3.2274022 8.7192478 4.0209466 8.6197123 10.9733491 10.1018638 8.7982625 NA 8.9643602 10.2630187 5.9204172 1.9054664 -0.6794576 5.2031463 9.4092923 2.1278644 7.1533939 8.8998200 7.1214040 10.8610294 9.6933692 0.9055049 10.5414870 NA 7.4290284 13.5795853 9.0936434 12.6411637 -0.6794576 1.3204847 7.4702513 -0.6794576 2.7799321 -0.6794576 1.3204847 2.4904418 1.3204847 12.2747004 -0.6794576 7.1406836 11.2016181 10.4549304 6.1278582 9.3703526 9.8760518 8.8557795 0.3205424 4.9352146 9.8577226 4.3649016 NA -0.6794576 6.5966281 11.350381 8.784029 8.351171 10.504760 9.780960 10.859178 5.429030 10.819852 9.281954 10.057751 12.504140 12.494494 8.389282 9.449787 6.587290 7.855779 9.465162 11.153394 12.149236 8.306346 13.609941 8.878925 3.568433 8.563678 8.587291 9.708360 5.251242 4.964362 9.479114 11.387266 2.127864 9.426413 7.738356 9.745468 12.281049 10.484783 9.789128 8.477851 10.238622 5.763449 2.490442 10.720706 8.859663 10.333827 10.795224 9.175372 12.452361 10.746769 10.419194 7.140684 NA 10.169745 7.252955 10.029588 8.892257 10.273973 11.236010 10.233393 8.695544 7.563678 15.461853 10.820848 10.389954 11.665355 11.750434 1.320485 4.127856 9.142278 8.916694 9.132681 TCGA-AC-A8OP 72 0 NA 614 breast stage ia t1c n0 (i-) mx female 2011 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 2 NA NA 6 4 4 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.20808496 9.61425599 11.64466441 9.30040496 9.84857834 9.12825731 10.33261586 9.63882124 10.04021053 13.00284778 11.70630792 10.04658000 4.85746352 13.49802919 4.00430363 9.48160410 5.69396360 8.87188060 9.34702269 12.82633393 2.22002033 14.90468277 5.07247458 9.03687308 11.05748425 5.83146687 -0.94981178 8.76726878 9.63882124 1.05011855 7.42514623 6.23001467 0.05004888 3.22003581 10.25773103 10.41205036 9.00284792 10.60085335 10.01155630 11.70496630 3.57366536 12.43489029 14.23075389 10.47423079 10.17034447 10.25651041 10.71277494 4.44242602 4.88299512 8.65001954 12.27591648 NA 11.13092405 5.02738852 5.57366839 4.69396081 9.27410811 12.20080581 10.03381267 11.98545578 12.84249015 8.78142562 9.94719566 9.88569119 11.05573111 10.89638047 5.02738852 11.11147772 10.53039190 -0.94981178 10.36071927 9.69125515 4.84270233 4.50953750 9.97788450 10.49718980 10.86629022 10.39938774 4.17939162 7.67946321 12.77334084 11.36582221 9.77462038 9.28132779 0.609730 1.126600 0.423180 -0.097268 0.000000 0.437670 -0.213170 -0.209210 -0.114820 -0.114820 0.860430 0.091155 0.100310 0.100600 0.089482 0.089482 0.088982 0.081251 0.108620 -0.056442 -0.102370 1.770900 -0.106440 3.218000 0.733030 0.058795 0.058795 0.389210 -0.513730 -0.201990 -0.021921 -0.097268 -0.196620 0.091010 0.125050 0.125050 -0.213170 -0.206100 -0.209210 0.375780 0.363790 -0.837560 -0.500480 -0.505050 0.085267 0.085267 0.100310 0.805190 0.100600 0.089482 -0.507120 0.129180 0.099288 0.091365 0.112280 -0.511600 -0.056442 -0.056442 -0.102370 -0.489110 -0.495800 0.030029 -0.493080 -0.031632 0.058795 -0.195120 -0.200250 -0.181180 -0.205970 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 -0.102 -0.181 -0.489 0.708 1.204 -0.181 -0.493 0.674 0.000 -0.202 0.408 0.113 0.389 -0.200 -0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.125 0.125 -0.209 -0.209 0.364 0.364 -0.833 0.860 -0.500 -0.500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 -0.102 -0.181 -0.489 0.708 1.204 -0.181 -0.493 0.674 0.000 -0.202 0.408 0.113 0.389 -0.200 -0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.125 0.125 -0.209 -0.209 0.364 0.364 -0.833 0.860 -0.500 -0.500 0.000 0.000 8.05010658 1.85746352 5.31689152 10.91506648 11.40545763 7.41743399 11.19444612 8.77409157 8.86388767 4.00430363 12.26518446 11.57724140 5.95699754 3.13756910 6.23993070 7.46373443 3.44242602 9.26077796 11.93865953 11.35160271 8.98084390 6.29803323 7.81829073 9.80916247 7.31689333 7.99847366 -0.94981178 NA 11.00684569 7.13225603 7.03879172 8.53392226 7.69396290 10.69633225 10.26624613 4.98084333 8.18453272 0.05004888 7.17422763 12.21971841 10.18067712 8.26199475 NA 7.31220137 8.64256368 3.95699521 4.05010984 -0.94981178 5.72253160 6.80712948 3.90808273 9.98895105 -0.94981178 8.60469555 10.29387555 9.60661267 4.66481844 10.10877482 12.05520471 8.33781900 0.63505783 3.95699521 13.77823964 3.22003581 NA NA 1.37206058 14.5987960 5.6648156 8.3239023 13.4980292 10.4153354 10.3955118 12.8263339 13.3282656 8.7712059 10.6880899 13.1629533 11.8926533 8.6500195 8.4273170 -0.9498118 8.7083180 11.7056373 11.169372 11.944166 6.998474 13.158464 8.407659 6.517712 8.960000 7.851006 10.639079 7.394403 8.414241 11.706308 8.247323 4.573671 10.797041 3.693966 7.271791 10.616161 10.635069 10.357307 8.482648 9.472171 11.474010 6.565806 12.673803 9.002848 10.273505 10.174874 11.937708 10.332037 10.037371 10.699363 8.697565 NA 9.104290 7.267870 12.275916 6.158632 11.130924 5.956998 11.481082 9.274108 7.708318 13.311026 9.522797 9.546960 12.273052 10.766497 4.635069 3.442426 10.203659 9.809995 10.896772 TCGA-AC-A8OQ 72 0 NA 34 breast stage iib t2 n1a mx female 2011 NA NA infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 3 4 2 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.33919441 8.79433366 10.94056460 9.05765442 8.68171946 8.97359033 9.30942246 10.26792081 11.78159585 13.39234830 10.23409135 10.24796963 1.40375854 12.43908358 3.32974074 11.37268934 7.97054999 9.43605583 9.00513412 5.01254186 NA 7.49965936 5.43935718 10.18152910 10.02651860 7.18509446 2.88916200 10.03381969 9.03017383 1.08181681 8.24671353 7.44812870 -0.91811503 8.09582687 9.13301554 9.79948287 8.97054971 9.21494877 9.33210504 11.06480008 3.88916200 6.92729679 16.11787279 8.50901447 10.21365057 10.55348175 10.59059173 4.91469845 -0.91811503 9.01549729 9.92022258 0.08174865 10.17786274 6.03600213 6.57365930 6.48268536 9.89799017 11.50754695 9.55449734 11.87926542 12.49133005 8.66676902 10.48694802 10.25035954 10.49860402 10.92258448 5.38558634 10.92376394 9.80972698 1.40375854 13.27963752 9.07898602 5.06342960 5.79605259 9.49013627 10.19619957 10.91706747 9.31901655 3.98869377 6.09303403 12.45833894 12.07615996 9.86234631 9.17588408 1.4305000 1.0926000 -0.1611900 0.2621600 -0.0254830 0.5383700 0.5771200 0.0018030 0.0000000 0.0000000 2.2874000 1.2201000 -0.1073600 -0.1210800 -0.1245700 -0.1387100 -0.2108200 -0.1227800 0.0663720 -0.1584800 -0.0935350 -0.0440090 0.1152100 0.0709600 -0.2559900 1.2914000 -0.2796500 1.2205000 -0.3262300 0.2226800 0.2362800 -0.2828700 -0.0978910 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8.9727090 3.0817998 11.9257276 11.8501004 3.9397908 2.5412422 4.8891620 8.4037347 4.9146985 11.9278845 11.2366246 10.6728613 9.2366246 1.4037585 8.0704913 10.5216374 8.9521713 7.4082363 0.6667566 1.0818168 10.2660620 3.9397908 6.8762222 8.4437504 8.9735903 10.9423271 10.3148269 4.1692676 9.4964917 2.5412422 8.2136637 13.4676015 9.7969105 8.6611225 NA 5.1262006 8.0006699 3.1692676 1.8891620 NA 6.9826731 6.0024573 5.8366942 10.7409104 7.9856883 9.5153920 11.2264648 9.4719755 6.4741245 10.1745637 12.8654187 9.8907707 5.2315553 4.3672103 9.6535592 2.4037313 5.4911989 0.6667566 6.9521716 11.735970 9.829999 8.390146 12.439084 9.839197 11.268849 5.012542 11.041808 8.935116 9.935116 13.746198 11.184110 9.015497 8.061946 5.474124 7.651662 10.927689 10.948313 11.669818 3.889162 13.439631 8.698355 7.348593 8.166615 9.298552 9.751321 7.979652 7.718431 10.234091 10.505973 7.474124 9.700192 8.927296 9.482291 11.943087 10.057654 9.747142 7.711163 9.548393 9.041808 10.729715 11.558284 8.970550 9.893181 10.432193 11.934336 12.686244 10.345662 10.886744 9.012544 NA 10.197188 6.970550 9.920223 10.882706 10.177863 6.740018 10.796481 9.897990 7.678406 13.917808 9.916278 10.585632 12.987664 11.345076 6.482685 6.147895 9.923371 9.002159 9.423881 TCGA-AC-A8OR 75 0 NA 40 breast stage ia t1c n0 (i-) mx female 2013 NA NA mucinous carcinoma 0 white not hispanic or latino NA NA 3 5 NA NA 5 1 3 4 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.81805165 8.88516586 11.46610267 9.23427306 8.54503319 9.12106256 10.98279070 9.72594203 10.46811692 13.54711886 11.41193590 10.41272046 -0.01727104 12.01638579 1.56774013 10.85431098 7.70388973 7.97147515 9.96293027 13.17762450 2.88968769 13.98349498 6.27741202 10.18449814 9.88063609 8.69014992 0.56774013 9.45039617 9.07554787 2.88968769 8.28885224 9.52775516 NA 2.56776446 9.52678912 9.95505251 9.76415039 10.44835711 8.74267895 10.95971278 -0.01727104 11.80237108 15.11817936 6.43828287 11.05224049 11.15709223 10.74890547 5.73767865 -1.01712504 8.22834348 9.31258713 -0.01727104 10.84504063 3.07025192 3.88967796 4.76414973 9.88817778 11.70410357 10.35511166 11.09945959 12.59899492 8.23545615 10.48760975 10.52420201 10.52437138 11.12138251 4.91352614 10.86313950 12.95343590 NA 10.46559865 8.51026769 3.85955218 5.28657070 11.16611593 10.25133269 10.82120676 8.94713165 -1.01712504 3.93698650 13.36669746 12.73245068 10.06693478 9.29907222 -0.00013862 -0.00013862 0.00600560 0.01544700 0.02132300 -0.02288100 -0.00387790 -0.88225000 0.00291330 0.00291330 0.00291330 -0.00415460 -0.00415460 -0.00567570 -0.00567570 -0.00567570 0.00000000 0.00000000 0.01126100 -0.00609040 -0.02164700 -0.03681000 -0.03681000 -0.02794500 -0.04305900 -0.04305900 -0.04305900 -0.03163200 -0.04441500 -0.00013862 0.00000000 0.00986690 -0.03775000 0.02132300 0.00889200 0.00889200 -0.00387790 -0.88225000 -0.93378000 -0.01560400 0.00805670 0.00291330 0.00624810 0.00319100 0.00319100 -0.02123500 -0.00415460 -0.02671400 -0.01660400 -0.00567570 -0.00567570 -0.00567570 0.00000000 0.00000000 0.00000000 0.01126100 -0.00609040 -0.00609040 -0.02164700 -0.02928400 -0.03681000 -0.03681000 -0.00360110 -0.04305900 -0.04305900 -0.03163200 0.00917050 -0.03817000 -0.05797100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.866 -0.866 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.866 -0.866 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.58641724 NA 4.02718060 11.60530014 11.25949671 8.91503502 10.91869243 6.96641086 8.58801110 NA 12.61476348 11.44796423 4.86543388 2.15270263 4.96007146 7.85006929 3.62664939 10.55549093 11.43528938 10.23840952 8.79657180 NA 7.87760868 10.73851284 4.93698650 1.98280196 3.68322483 NA 9.94061826 1.56774013 4.15271885 7.86543388 5.72425735 11.58127361 9.75097507 4.34034150 9.07290300 0.98280196 8.16518488 13.32639284 9.55643785 8.59381537 -1.01712504 NA 7.88063594 -0.01727104 -0.01727104 -1.01712504 3.23072563 4.34280361 2.44222695 10.76456022 1.30474466 7.71750027 10.93261745 9.60941240 3.07025192 8.02170957 11.28285723 8.08082286 0.56774013 1.30474466 11.83141366 3.15271885 NA 0.56774013 1.56774013 13.214503 3.683225 8.550747 12.016386 10.284287 10.155218 13.177624 12.563874 8.869707 10.142031 12.080329 12.539536 8.228343 9.114648 1.982802 7.096533 11.511245 11.04348662 12.64601523 7.62664720 14.14525915 8.97147544 7.89268366 8.54503319 7.61578558 10.22888998 6.97714366 6.35782996 11.41193590 6.20195921 NA 10.63518755 10.82396187 6.73887995 12.78298284 10.21521166 10.62348758 8.24723352 9.96364434 10.55691112 1.98280196 11.84775836 9.76415039 10.49849053 10.31370762 10.82984805 9.65698306 9.70474438 10.56210664 9.24253391 NA 9.64439061 3.62664939 9.31258713 -0.01727104 10.84504063 7.49849023 10.72046060 9.88817778 6.65521585 14.71442715 10.09718372 9.73014454 12.60724350 10.65698297 -0.01727104 -1.01712504 9.96720911 9.54598690 9.31370751 TCGA-AC-A8OS 71 0 NA 70 breast stage iia t2 n0 (i-) mx female 2013 NA NA infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 2 NA NA 6 3 4 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.931822 9.755480 12.127523 9.700214 7.519591 9.330886 11.715926 9.609894 9.855943 10.304586 10.777656 10.206159 3.134155 12.294158 3.567119 9.461488 6.606648 8.614748 11.264474 12.627015 1.619601 12.953940 8.223743 9.343857 10.761329 5.116011 -1.187707 11.813366 8.614748 5.204552 8.312078 7.187272 -1.187707 5.484657 10.841519 9.860038 9.265503 12.420372 10.217906 12.621397 6.246860 11.869039 14.808882 9.231013 10.611894 10.926951 10.500920 5.382086 3.719118 8.665542 13.173491 1.134155 10.768608 5.540151 6.731095 5.079020 10.213112 11.829389 10.173628 12.858845 13.203879 7.221623 10.003291 10.076557 11.127382 11.756578 5.041050 11.936515 9.827647 -1.187707 10.429240 8.688749 4.902238 5.238496 9.854576 10.311580 10.094162 9.517000 4.567119 9.682597 13.507243 12.137257 10.304085 9.712344 0.00875280 0.00875280 0.00152550 -0.00567570 -0.01078400 0.00069327 -0.00533040 -0.00533040 -0.00193990 -0.00193990 -0.00193990 0.00917050 0.00861350 0.00485790 0.00485790 0.00485790 0.00000000 0.00000000 -0.00733390 0.00819590 0.02373500 -0.46834000 -0.46834000 -0.46834000 0.02791900 0.51054000 0.51054000 0.02946600 0.00875280 0.00875280 0.00277450 -0.00304750 -0.01078400 -0.01078400 0.01433000 -0.01023200 0.01126100 -0.00533040 -0.00166290 0.52731000 0.46732000 -0.00193990 0.01223700 0.01056400 0.01056400 0.01558700 0.00861350 0.00861350 0.02651400 0.00485790 0.00485790 0.00485790 0.00000000 0.00000000 0.00000000 -0.00733390 0.00819590 0.00819590 0.02637300 -0.48081000 -0.46834000 -0.46834000 -0.47300000 0.02791900 0.51054000 0.02946600 0.01964300 0.04726800 0.04726800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.481 -0.468 -0.468 -0.473 -0.473 0.000 0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.467 0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.481 -0.468 -0.468 -0.473 -0.473 0.000 0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.467 0.467 0.000 0.000 0.000 0.000 0.000 0.000 7.9846600 5.9721044 6.5333313 11.0778473 10.3701745 8.7321681 12.3455620 9.9348144 9.2738753 5.6451223 12.0629748 10.8374653 4.2716647 2.7191177 5.6577229 7.8234596 3.8996977 10.9638831 11.5976847 10.3835109 8.5452475 5.1872729 8.0143559 10.5536993 7.8401384 8.5333313 NA 0.3971458 11.3653815 8.1431490 8.5367461 8.3220074 9.6139406 11.6041562 9.9921413 5.8456556 8.9821574 -1.1877072 8.3591267 12.9856752 10.0772612 8.2045496 NA 3.0601512 7.4452276 2.5126820 4.6702115 1.1341552 6.2960480 6.8456556 3.7191177 9.9128946 NA 9.5057193 10.4868659 9.4204870 6.6066480 10.5427024 12.5645084 8.7576760 2.7191177 4.0216840 10.2290298 -1.1877072 NA 0.8122107 2.8996977 12.775920 5.221622 8.638781 12.294158 10.445682 10.031401 12.627015 12.362618 9.095529 10.497743 12.392020 9.789512 8.665542 7.663981 1.812252 6.682597 11.006681 11.4499892 12.6707961 6.4987327 13.7646505 8.7400101 7.3934325 9.0020569 7.2045496 10.3092208 8.1719819 8.7994963 10.7776558 6.5870199 1.6196008 11.1651033 4.9821585 7.3229566 10.9790230 10.9418373 10.9632488 7.0836953 9.0778473 11.7468446 6.7722341 12.3280799 9.2655030 10.2237433 9.9214100 11.4000098 10.8349468 9.9865338 10.6721553 9.3030832 NA 10.1104037 8.1758634 13.1734907 7.1829197 10.7686084 7.2593158 11.1378188 10.2131116 7.4560882 13.8939208 10.1194331 10.6721553 12.2024012 10.9138797 2.1341552 0.8122107 10.4659730 10.6502543 10.2515437 TCGA-AN-A03X 74 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 1 NA NA NA 1 1 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 5.548757e-07 2.080784e-07 9.09090909090909 4.54545454545455 4.54545454545455 45.4545454545455 36.3636363636364 9.124444 10.033421 11.077948 9.593288 8.339989 8.661917 8.451967 9.273145 10.911160 12.594181 11.000111 10.183403 NA 13.071014 3.158660 9.489576 7.613399 7.790096 7.764933 12.332337 2.936270 13.748244 4.905895 10.126092 9.702244 2.351317 NA 9.904934 11.870695 2.673240 7.501051 6.752184 NA 4.521227 9.709956 10.814318 10.461135 8.608692 9.503589 10.629754 3.051738 9.531214 15.199438 7.313160 9.025497 11.468623 10.796837 4.521227 6.459828 8.620431 10.648794 NA 11.203444 6.691154 5.560758 2.521227 9.506123 11.377828 10.182612 12.480426 12.163883 9.121142 10.563193 9.430789 11.321410 10.619846 6.106191 11.065121 10.628592 NA 10.148966 9.166688 1.936252 5.106193 10.141653 9.265690 9.116176 9.708856 NA 8.483162 13.586720 11.146532 9.650513 9.572892 0.76255000 0.76389000 0.00694350 0.00083195 -0.00041585 0.01265500 0.00000000 0.00000000 0.64103000 0.64103000 0.64103000 0.00124810 0.00124810 0.00221930 2.00970000 2.84000000 0.01950300 0.00305220 -0.54088000 0.01273700 0.01321300 0.02006300 0.02006300 0.02006300 -0.00567570 -0.00567570 -0.00567570 0.43969000 -0.51764000 -0.53124000 -0.01285100 0.00694350 -0.00041585 -0.00041585 0.00889200 0.00889200 0.00000000 0.00000000 0.00000000 -0.00622860 -0.03199200 0.87767000 -0.47976000 -0.47604000 -0.47604000 -0.46834000 0.00124810 0.00124810 0.00499690 -0.03817000 -0.53774000 -0.53774000 0.01950300 0.00305220 0.00305220 -0.54088000 0.00861350 0.00861350 0.01321300 -0.52256000 0.02006300 0.02006300 -0.48806000 -0.00567570 -0.00567570 0.44901000 0.49259000 0.03750000 0.03750000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.100 -0.519 0.000 0.000 -0.488 -0.488 0.000 0.000 -0.518 0.245 0.449 0.449 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.641 0.641 -0.476 -0.476 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.100 -0.519 0.000 0.000 -0.488 -0.488 0.000 0.000 -0.518 0.245 0.449 0.449 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.641 0.641 -0.476 -0.476 0.000 0.000 9.600418 NA 6.158660 10.422767 11.330730 5.618092 10.803546 8.762900 8.726344 3.351303 12.376790 11.728520 NA 1.936252 2.810731 8.099497 4.599234 9.577717 10.599825 10.562584 8.373672 4.905895 5.395697 9.305501 5.459828 4.936266 2.673240 NA 10.882686 4.673234 7.603970 5.936268 9.563193 9.726344 10.289414 6.051744 7.546061 NA 6.980661 11.996513 6.246123 8.062111 NA 7.132664 8.106192 NA 3.743623 NA 3.599234 4.258195 NA 9.951217 3.743623 7.145720 9.754316 10.141653 3.599234 9.636707 12.468298 7.613399 1.351289 3.258202 11.779141 1.936252 NA NA NA 13.573195 3.874866 8.116176 13.071014 8.599232 10.567444 12.332337 11.435448 10.330730 10.018416 13.208314 11.529347 8.620431 8.488296 NA 6.501052 11.266437 10.617505 11.797612 5.305500 12.782671 8.760695 4.905895 8.395699 7.119489 9.296646 5.655086 6.521230 11.000111 8.568050 4.395700 10.431456 3.874866 4.088447 11.113687 9.706656 10.686695 8.203053 8.203053 11.747374 3.743623 10.558148 10.461135 10.335011 10.083472 11.222825 10.010408 10.099497 10.047403 8.218583 6.608692 7.784556 7.079224 10.648794 2.351317 11.203444 9.359733 9.265690 9.506123 5.599231 13.219645 9.715439 9.267184 12.395699 10.370200 NA NA 9.698926 9.611048 8.359733 TCGA-AN-A03Y 66 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 NA NA NA 4 1 2 5 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6.242351e-07 2.427581e-07 40 16 4 8 32 9.9228873 9.8884975 11.4663732 8.2293341 8.7049131 8.5388427 9.5284111 9.2310505 10.6193596 8.6482307 11.6242662 10.6015565 4.5374576 12.2248185 2.2155233 7.7511028 5.1149999 8.4736412 7.0149344 13.4118939 1.9745293 14.5174860 1.6849982 10.2382674 11.9714429 3.2699757 1.1000357 11.3908378 11.7042953 3.4219773 8.4007847 5.7147620 -0.4849941 2.9074099 9.2042129 9.9068691 10.0099441 11.4266677 9.8901279 10.4671016 2.4219907 11.2026829 14.3408423 6.1921744 9.6294816 11.5250920 10.8855035 4.3479774 3.2699757 8.4561363 11.5445483 NA 10.0624651 4.3224402 5.4692836 4.1298023 10.2133591 12.0320196 11.2968580 11.3078788 12.0550954 9.2276155 11.2809961 10.3568219 10.6353264 10.6642005 5.0228827 11.5464451 12.0737484 NA 10.2011512 10.6607023 4.3979740 5.3730705 11.5381498 10.9665572 10.4231058 10.8429218 7.3605785 9.1214936 11.9718279 11.0564272 10.6884533 8.8879535 1.2668000 2.7559000 0.3805900 0.3805900 -0.0751880 0.9196900 0.4146600 0.3675900 -0.5317300 3.6569000 3.4382000 -0.0416010 -0.0416010 -0.0539920 3.6569000 3.6569000 0.3898500 0.3898500 0.3949900 -0.0395060 -0.0031617 0.0050212 0.0050212 -0.0146380 0.4473500 0.4473500 0.4424500 0.4708700 -0.4683200 -0.5322400 -0.4853200 0.3805900 -0.0751880 -0.1008500 0.8120900 0.8302300 0.4146600 0.3490600 0.3675900 -0.0583040 -0.0753210 -0.5531200 -0.5512800 -0.5512800 -0.5157700 -0.5157700 -0.0416010 0.0000000 -0.0539920 -0.5290800 -0.5464600 -0.5465700 0.3898500 0.3898500 0.3898500 0.3625100 -0.0395060 -0.0395060 -0.0031617 -0.4869900 0.0050212 0.0050212 0.3755200 0.4473500 0.4473500 0.4708700 0.3699500 -0.0070334 -0.0411410 0.000 0.000 0.000 -0.480 0.390 0.390 0.363 0.000 0.000 0.088 -0.486 0.000 0.000 0.422 0.422 0.447 0.447 -0.517 2.756 0.471 0.471 0.370 0.000 -0.508 -0.508 0.381 0.381 0.000 0.000 0.812 0.812 0.368 0.368 0.000 0.000 2.906 3.438 -0.516 -0.516 0.159 0.159 0.000 0.000 0.000 -0.480 0.390 0.390 0.363 0.000 0.000 0.088 -0.486 0.000 0.000 0.422 0.422 0.447 0.447 -0.517 2.756 0.471 0.471 0.370 0.000 -0.508 -0.508 0.381 0.381 0.000 0.000 0.812 0.812 0.368 0.368 0.000 0.000 2.906 3.438 -0.516 -0.516 0.159 0.159 8.5744331 6.6900147 4.9244800 10.7306215 10.9468473 6.9729614 11.5289346 7.8220845 8.6507082 0.8370552 11.9215593 11.1875094 2.3224474 1.1000357 3.2155233 8.6065240 2.6850207 9.7233229 10.9167680 10.9486740 8.7475096 3.9413505 8.1187148 10.2886399 6.8901281 5.5919038 -1.4847922 NA 10.2215846 6.0464692 4.8188710 10.0687178 6.4458260 10.9773454 11.2693497 3.3730635 9.5023525 NA 5.7534922 12.8570242 8.2964482 7.5318968 NA 7.0658351 9.1103460 NA 4.1000525 NA 6.0149355 6.1180461 2.9745110 12.6393714 NA 6.0307885 11.0344790 10.2753926 4.8188710 9.7754200 11.8384248 8.0425655 4.7630184 3.4219773 12.1441036 2.6850207 NA 0.5151069 1.5151069 15.579519 5.613122 7.692508 12.224819 10.292960 11.908881 13.411894 11.308895 13.545989 10.736676 12.600644 12.640663 8.456136 10.932941 NA 6.809709 10.910890 10.415201 11.494156 8.314370 13.270498 8.079238 6.772477 9.613779 8.994869 9.358711 7.069677 5.054249 11.624266 5.581176 7.607846 10.209446 7.984731 8.050150 8.973495 8.736676 10.865199 9.567656 8.879223 11.843202 5.966299 12.624958 10.009944 10.141710 9.881957 11.292344 9.839832 9.359794 10.323248 7.928716 1.100036 8.871562 6.092518 11.544548 5.613122 10.062465 5.445826 10.315179 10.213359 7.357439 14.035216 10.212491 9.826837 13.197699 11.252758 2.515082 1.684998 9.726368 9.813151 9.446565 TCGA-AN-A041 29 0 NA 7 breast stage iib t2 n1a m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 2 1 NA 2 3 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.733986e-07 22.2222222222222 22.2222222222222 5.55555555555556 27.7777777777778 22.2222222222222 10.406104747 9.920536717 12.076057014 10.242168270 8.543704663 9.609563836 10.167501443 10.524321915 9.667844238 15.145376222 9.694680520 11.301631313 0.994217647 14.154164612 2.801593262 7.982925145 5.860488606 8.751352914 11.347019862 12.988829890 2.109728291 13.565005645 0.731183242 9.002669333 11.331676781 8.898122475 1.409255147 9.120084656 8.761321513 2.868706517 8.345916143 7.448197268 -0.005782353 5.328139932 10.055386837 10.088318392 9.271915608 10.142717329 9.557119213 11.693090075 2.316174712 11.208964606 15.257534388 8.343839056 9.216633105 11.365109732 11.221856665 5.081701790 7.584204135 9.477384696 10.438220274 -0.005782353 11.343153285 5.420505982 4.801593262 4.363472483 11.035899887 11.816545990 9.713058928 12.611478589 13.197792658 8.721026710 11.212198453 11.192896524 11.472504779 11.284451611 5.190638563 12.435888133 8.816545950 NA 10.295736912 10.739634983 3.063485685 4.340013855 10.879174352 11.098621085 10.832919437 9.919547908 1.731226696 8.474021038 12.177979470 10.561563091 9.897620566 9.736269326 0.610350 0.713670 -0.201310 0.264110 -0.268650 -0.308640 0.201280 -0.656920 -0.427630 -0.427630 1.395100 0.031657 0.031657 -0.288200 -0.069408 -0.679080 0.029987 0.059570 0.848190 0.056860 -0.024465 -0.682460 0.887340 0.958660 -0.354940 -0.198070 -0.198070 0.108830 -0.324560 -0.296690 0.011739 -0.201310 -0.288630 -0.249890 -0.289100 -0.281630 0.201280 -0.656920 -0.656920 0.058001 0.058001 -0.029388 -0.298560 -0.292900 -0.324230 -0.313020 0.031657 0.045911 -0.320110 -0.069408 -0.679080 -0.679080 0.059570 0.059570 0.059570 0.848190 0.056860 0.056860 -0.069391 -0.282700 -0.682460 0.958660 -0.448410 -0.329080 -0.198070 0.508180 0.041378 0.035444 -0.695910 0.000 0.000 -0.219 -0.610 0.000 0.000 0.848 0.000 0.000 0.318 0.036 -0.369 0.959 0.000 0.000 -0.329 -0.329 -0.297 0.417 0.000 0.000 0.000 -0.709 0.000 0.000 -0.201 0.063 -0.269 -0.269 -0.282 -0.282 0.201 -0.657 0.000 0.000 -1.293 -1.293 -0.324 -0.324 0.000 -0.168 0.000 0.000 -0.219 -0.610 0.000 0.000 0.848 0.000 0.000 0.318 0.036 -0.369 0.959 0.000 0.000 -0.329 -0.329 -0.297 0.417 0.000 0.000 0.000 -0.709 0.000 0.000 -0.201 0.063 -0.269 -0.269 -0.282 -0.282 0.201 -0.657 0.000 0.000 -1.293 -1.293 -0.324 -0.324 0.000 -0.168 7.742433403 -1.590744853 7.123523426 9.981978484 12.438565452 6.791383021 10.504675207 9.069247279 8.674893138 NA 10.924485263 11.566554089 4.409275516 0.409255147 3.618732001 8.145680002 3.963862490 12.464730134 11.544987512 11.094903072 9.054936635 2.932835996 8.054936907 10.359834099 6.584203383 1.994253859 3.164158743 NA 10.389060709 3.835540113 6.994240280 7.574184785 5.109719935 10.200107296 10.789198037 4.409275516 8.120084915 NA 7.102765196 12.539768362 8.585451206 8.215022324 NA 9.340754521 8.332605903 -1.590744853 3.963862490 NA 2.801593262 4.553120854 1.579180148 10.746342582 -1.590744853 8.099276266 11.076167909 9.753574119 5.291920291 8.989536704 12.204100205 7.502035368 4.242168032 3.109711578 12.241772717 5.177463391 -0.005782353 0.994217647 1.216610069 13.148079 5.852221 8.479399 14.154165 11.087399 10.129950 12.988830 13.740790 8.176651 11.323663 12.826537 10.425042 9.477385 9.063914 NA 8.237415 12.857395 10.969611 12.607493 6.548830 12.715268 8.810158 4.731205 9.439945 9.744110 10.487879 5.940660 10.242959 9.694681 6.680741 3.694680 10.850666 8.018457 7.778527 11.503521 9.854293 10.960986 7.664306 9.051330 11.635088 5.164167 11.467486 9.271916 10.909622 10.040910 11.674454 9.858943 10.647982 10.455038 9.294212 NA 9.866413 7.548727 10.438220 5.475367 11.343153 8.142293 10.221054 11.035900 7.426087 13.350463 9.710774 9.633883 12.212602 10.078163 -1.590745 -1.619714 10.732051 10.672841 9.905133 TCGA-AN-A046 68 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 3 NA NA NA 4 4 3 2 NA NA 0 7 0 7 0 0 0 0 0 4 0 0 4 4 0 0 0 0 0 0 0 4 0 0 0 5 4 7 0 7 4 0 0 5 0 1 4 0 4 0 4 0 0 4 0 0 0 0 4 7 7 0 0 0 0 0 0 7 0 7 4 0 4 4 0 0 0 0 0 0 4 4 0 4 0 0 0 0 5 7 0 4 7 7 0 5 0 0 4 0 4 0 4 0 4 0 0 0 0 7 0 0 5 4 0 0 0 0 0 4 4 4 4 0 4 0 0 0 4 0 4 1 0 0 4 0 0 0 7 0 0 0 0 0 5 7 0 0 4 7 7 0 0 5 4 7 0 1 4 0 0 7 4 0 4 0 0 0 4 4 0 0 0 0 0 4 0 0.0001464872 3.249491e-05 38.1142857142857 37.847619047619 0.60952380952381 10.0952380952381 13.3333333333333 10.5425294 9.6969477 11.8576289 8.3687535 8.1224776 9.3521324 10.7464387 9.7230370 9.7486628 13.0174272 10.3666863 10.4685095 0.1838358 12.9089604 3.2427702 10.0992597 6.9298324 8.0397849 8.4830862 13.1015611 2.1838676 13.3129465 2.4062645 9.4110929 11.1580538 8.7087463 -1.4012537 10.4444058 11.8468432 0.1838358 7.2606938 6.3268357 -0.4010632 4.1535054 9.8732938 9.6890281 9.5428957 10.2053209 9.7763353 11.3261980 2.6863885 11.9522004 15.1631247 7.3514305 9.9728684 9.7178568 10.1126433 3.8843146 4.4815573 8.3917059 10.0578349 NA 10.8920999 5.1838795 6.9782940 5.4444053 9.6350894 12.2956659 10.2117842 12.2496309 12.9943829 7.4631017 10.9183056 10.3438673 10.9429341 11.1368621 4.5761956 13.1794687 10.8068451 0.5989368 10.6636584 8.9782940 3.8087557 6.0827324 10.4773499 9.9772105 10.5370250 9.9723246 2.0583511 9.1429142 12.4562164 11.6665181 10.1390438 8.9531651 -0.1966900 0.3751900 0.0026357 0.0026357 -0.1633200 0.0136320 0.0105640 0.0024969 0.0018030 0.0018030 -0.0019242 0.0093098 0.0000000 0.0024969 0.0024969 0.0024969 -0.0018014 -0.0018014 -0.1270700 0.0037465 0.0151680 -0.5272600 -0.2407000 -0.2407000 0.0332670 0.0332670 0.0332670 0.0211830 -0.2266200 -0.1966900 -0.0294480 0.0026357 -0.1633200 -0.1633200 -0.0027707 -0.0027707 0.0109820 0.0024969 0.0024969 0.0037465 0.0126550 0.0018030 -0.0171950 -0.0171950 -0.0140900 -0.0140900 0.0000000 0.0000000 0.0024969 0.0024969 0.0024969 0.0024969 -0.0018014 0.0146090 0.0146090 -0.1275900 0.0037465 0.0037465 0.0151680 -0.5235800 -0.5272600 -0.2407000 0.0030522 0.0332670 0.0332670 0.0091705 -0.0691980 0.0342540 0.0342540 0.000 0.000 0.000 0.000 0.000 0.000 -0.128 0.000 0.000 -0.511 -0.511 -0.527 -0.241 0.000 0.000 0.000 0.000 -0.197 0.027 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.163 -0.163 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.128 0.000 0.000 -0.511 -0.511 -0.527 -0.241 0.000 0.000 0.000 0.000 -0.197 0.027 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.163 -0.163 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6240552 1.4062645 5.0746510 10.6157240 11.2702356 8.1355318 11.7992013 9.1380939 8.3109267 -0.4010632 12.8251774 11.3928705 2.9912270 4.7887379 1.5989368 7.8349299 4.1838755 12.3578676 11.8158131 10.6027850 9.7905919 2.5058147 8.5589177 10.1787031 7.7887405 6.0501273 2.4062645 NA 10.6535200 6.6650047 5.9026959 8.5946829 3.5989130 10.8018078 10.2989219 4.1224739 8.1819985 NA 7.5177788 13.2467676 8.8692110 7.1224781 -0.4010632 0.5989368 7.7512006 2.9208459 3.1838835 1.7688407 6.9869331 7.0522692 3.1838835 10.8159646 -1.4012537 6.7435742 10.8820041 10.1121498 5.6969481 10.3827324 14.4147493 9.0272760 5.2427702 4.1224739 11.6344021 2.2993619 NA -0.4010632 1.7688407 12.6067787 4.1224739 8.9095286 12.9089604 10.2924026 11.3880417 13.1015611 11.8120199 8.9997951 10.5340808 13.6631532 11.4931651 8.3917059 8.3900787 -0.4010632 7.3302348 11.0985125 11.4717829 12.7909002 8.1419477 13.2799322 9.1458102 7.4158989 9.1467741 7.9208435 10.7899287 7.8889344 8.3753488 10.3666863 5.0583468 2.2993619 11.4108924 4.9739556 7.1381909 10.7970538 11.1511045 10.6426266 7.9782940 9.7054786 11.2398384 6.5589181 11.0195707 9.5428957 10.9747697 10.4349660 10.9619553 9.5080588 9.9095285 10.6143307 9.0726214 5.4692804 9.4709826 7.5361128 10.0578349 5.3670984 10.8920999 6.8325356 11.5144216 9.6350894 7.8610106 14.5934901 10.0867558 10.4677383 12.5725234 10.7084199 4.4568981 0.5989368 9.7600476 9.7893577 9.4389068 TCGA-AN-A049 62 0 NA 19 breast stage iia t2 n0 m0 female 2008 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 NA 4 3 1 4 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 38.4615384615385 11.5384615384615 3.84615384615385 23.0769230769231 23.0769230769231 10.5729849 10.2045606 11.3927231 9.4170624 9.4754147 8.7881287 9.7874308 9.2749500 9.6544570 12.7221103 10.6613287 10.4421067 -1.2260037 13.9080129 3.5289963 9.0005203 4.7048443 8.4553465 9.8708233 12.9317709 2.5814718 13.6112926 3.7283015 10.0909553 11.0068289 7.5910914 NA 10.0190665 11.0615319 0.7740807 7.1491476 7.6195979 -1.2260037 2.9440338 10.0807395 10.6394548 10.8263365 9.8642205 9.7684616 10.3425393 1.0960594 11.5491010 14.9104184 8.0553893 9.8401839 11.6630416 11.0770326 4.0960341 3.0220304 10.0727436 11.1344066 -1.2260037 11.5816643 5.3740205 5.9339786 5.0595110 10.4771466 11.5978734 10.7195520 12.2332836 12.9206768 8.5701479 10.8361543 10.2260970 10.9771502 10.6944610 4.9639318 13.4193725 8.3665653 -1.2260037 10.5377355 9.3515369 2.5711186 6.0314967 10.9932767 10.3562501 10.4170624 10.5591518 2.2335507 6.8930491 12.3035387 11.1036242 9.6742202 10.3185897 0.0000000 0.0352420 0.6470800 1.3340000 -0.7115900 -0.0270660 -0.0152630 -0.0152630 -0.6851500 -0.6851500 1.2985000 -0.6905100 0.0178240 0.0085368 0.6732600 0.6732600 0.0165650 -0.0108820 0.0296060 0.0171240 -0.6797600 0.0562280 1.9978000 0.7040100 0.0338310 0.0338310 0.0228080 0.0384890 -0.5613700 0.0000000 -0.6867000 -0.7013400 -0.0131270 -0.6877900 -0.0237030 -0.0237030 -0.0152630 -0.0152630 0.0047190 0.6490500 -0.7005500 -0.6851500 -0.6038100 -0.6038100 0.0249690 -0.6511800 0.0178240 0.0178240 0.0085368 0.6732600 -0.6870600 -0.6870600 -0.6076700 -0.0108820 0.0298880 -0.0008316 0.0171240 0.0171240 0.0552300 -0.6541700 0.0562280 0.0125160 0.0705300 0.0338310 0.0228080 0.0384890 -0.1316000 -0.6522300 -0.6338700 -0.675 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.413 0.072 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.622 0.000 0.000 0.000 -0.652 0.000 0.000 0.000 1.332 -0.712 -0.712 0.000 0.000 0.000 0.000 0.649 -0.052 -0.685 0.594 -0.604 0.000 0.000 0.000 -0.675 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.413 0.072 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.622 0.000 0.000 0.000 -0.652 0.000 0.000 0.000 1.332 -0.712 -0.712 0.000 0.000 0.000 0.000 0.649 -0.052 -0.685 0.594 -0.604 0.000 0.000 0.000 8.4797407 0.7740807 6.6320893 10.5636418 11.9946376 8.0263480 10.8178190 9.0375535 9.2372544 3.5814597 11.6215570 11.5549862 5.0595110 3.3590713 1.0960594 8.2779341 4.1664262 10.7007748 12.0403090 10.5591518 8.5571064 0.7740807 7.5878893 10.2981601 6.3363512 7.8826327 1.7741229 NA 11.1532157 3.8185029 6.5488959 9.2024684 6.2170523 11.3063569 9.7776260 3.3590713 8.8239566 -1.2260037 6.7741084 11.5754123 8.5239775 7.3515373 -0.2258349 1.0960594 7.8401976 5.4034654 4.0220393 NA 4.8185029 7.5196819 2.4745399 10.7055844 NA 7.6382940 10.3420642 10.0184720 5.4883543 9.3258163 14.2319058 8.0362027 3.7741123 3.4745529 13.1832339 2.6809994 NA 1.9440338 1.5814477 13.4949717 5.7741071 7.5620104 13.9080129 10.3739420 10.9750067 12.9317709 12.0288415 9.8609079 11.1696423 12.8759197 10.8638896 10.0727436 8.7726986 0.3590713 8.0869912 10.7930038 10.496916 12.016091 6.625858 13.284682 8.548895 5.796476 8.670441 8.988427 10.343356 7.036203 8.233540 10.661329 6.439444 1.359071 11.388588 6.050232 7.488731 10.493925 9.532331 11.022036 8.587889 9.551363 13.116808 4.882633 12.157721 10.826337 10.465852 10.644858 11.958983 9.455347 11.014601 10.255403 8.691480 NA 9.088725 10.260546 11.134407 5.233539 11.581664 6.861571 10.513467 10.477147 7.644473 13.682923 10.203515 9.747088 13.008102 10.125600 3.417961 NA 10.192488 10.720649 9.635971 TCGA-AN-A04A 36 0 NA 90 breast stage iiia t2 n2 m0 female 2008 NA NA infiltrating ductal carcinoma 4 white not hispanic or latino 1 1 1 NA 2 2 1 1 2 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 45.4545454545455 9.09090909090909 0 36.3636363636364 9.09090909090909 9.95462804 9.87778458 11.63559239 9.24256035 7.72440880 8.27063873 9.75220500 10.48635619 10.80482920 14.51228970 10.19250008 11.41322643 0.07093882 11.92479588 3.48600637 9.46328404 5.72440744 8.41969478 7.30937085 12.70123365 2.07097316 13.60693035 3.34399047 9.13166253 10.80369928 8.44310600 2.29337048 10.51385479 11.80270982 2.18643717 7.04442472 7.71482248 2.48599349 4.46328241 9.28204358 10.44201705 9.68751531 10.98560083 9.73689453 11.21264794 10.56582210 11.04920028 15.80110935 6.90478393 9.77947560 11.06814599 10.91750165 4.07096457 4.24089434 9.13076154 10.66030553 NA 11.42888502 5.88688420 4.61528681 4.87832317 10.22536279 12.08765875 10.46292612 12.06201591 12.75381483 7.80341692 10.87912632 10.36597013 11.07401586 10.91697920 3.80793188 11.79718467 11.88434691 NA 10.51494607 8.78406649 1.29542917 4.84355680 11.12172213 10.05491019 9.94850624 9.56148309 1.07093882 7.35019046 12.19260795 11.27145649 9.59322116 10.13031096 0.4042700 0.4042700 0.0102200 0.0273570 0.0098669 0.0175440 0.9462900 -0.4155300 -0.4386400 -0.4386400 1.3877000 -0.0243710 -0.0267970 -0.4200300 -0.4200300 -0.4200300 -0.4402700 0.0038854 -0.0313590 0.4267100 3.1996000 -0.4691800 -0.4691800 1.7500000 -0.4342000 -0.0635690 -0.0635690 0.4112900 -0.4658900 -0.4089300 -0.0364010 0.0102200 -0.4498600 0.0098669 0.0175440 0.0175440 -0.8791400 -0.4155300 -0.0395290 0.0136520 -0.0131270 -0.8988600 -0.4335500 -0.4335500 -0.4126700 0.3320500 -0.0267970 -0.0494130 -0.4200300 -0.4200300 -0.4200300 -0.4655700 -0.4402700 0.0038854 0.0038854 -0.4178400 0.3895600 0.3895600 -0.4159700 0.4248600 -0.4691800 -0.4691800 -0.4791300 0.5374900 -0.0635690 0.7912300 -0.3980800 0.0657990 0.0657990 0.000 0.000 -0.420 -0.420 0.000 0.000 -0.383 0.390 0.000 0.425 0.425 1.281 1.750 -0.400 -0.400 -0.434 -0.434 -0.409 -0.005 0.730 0.000 -0.430 0.000 0.000 0.000 0.000 0.000 -0.415 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 -0.439 -0.101 0.332 -0.457 0.000 0.000 0.000 -0.420 -0.420 0.000 0.000 -0.383 0.390 0.000 0.425 0.425 1.281 1.750 -0.400 -0.400 -0.434 -0.434 -0.409 -0.005 0.730 0.000 -0.430 0.000 0.000 0.000 0.000 0.000 -0.415 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 -0.439 -0.101 0.332 -0.457 0.000 9.39664673 NA 5.31889525 10.18687712 12.69072798 6.23506835 10.62555534 9.54321727 8.16259576 1.94542043 11.54534847 12.08593082 3.77141023 0.48604499 1.80793188 8.45467067 3.53039541 10.48741219 11.27043439 10.64113848 8.89114544 1.07093882 9.12443981 10.09333437 5.93721490 7.27390654 3.57347148 NA 10.13570929 5.75279140 7.96981991 7.59191275 5.62555397 10.05817374 10.69789229 3.07097316 7.74103276 0.48604499 6.67087998 13.39434973 5.72440744 7.39589739 -1.51416103 5.57346542 7.99577902 NA 3.44019478 NA 3.97785689 2.81297049 2.87831336 11.40803087 3.00956216 8.82696694 10.60462068 10.19594942 4.04059439 9.89274058 12.24381071 7.87402108 1.29337048 3.87832317 12.76786163 4.00956216 0.07093882 1.29337048 0.48604499 13.148617 5.903855 8.410816 11.924796 10.075655 10.645875 12.701234 14.610751 8.711211 10.623594 13.228156 11.596487 9.130762 9.014458 -0.513955 7.916456 11.093103 11.622194 12.666457 7.702750 13.564320 8.597140 5.486003 9.727987 7.729178 10.966582 5.852326 9.768513 10.192500 5.920632 3.530395 11.453771 7.179491 6.785670 12.034344 10.099333 10.671809 9.312235 9.116271 10.614643 4.343983 9.683976 9.687515 10.994542 9.378547 10.771984 9.769092 10.272682 11.027827 9.647136 -1.514161 9.098725 7.690330 10.660306 5.714822 11.428885 7.933087 10.790355 10.225363 7.104389 14.279430 10.101174 9.932570 12.580659 10.202823 1.293370 -1.514161 9.709402 10.650597 9.493732 TCGA-AN-A04C 51 0 NA 54 breast stage iib t2 n1 m0 female 2008 NA NA infiltrating ductal carcinoma 2 white not hispanic or latino 3 2 4 NA NA NA 2 6 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 1.28315e-06 4.855162e-07 30.7692307692308 17.3076923076923 5.76923076923077 21.1538461538462 25 9.974202 9.036916 11.875384 7.631265 9.283459 9.277700 10.134373 10.138918 11.170119 14.096375 9.355529 10.897146 3.205001 17.290983 3.789959 8.298977 4.694384 9.542108 3.205001 12.398810 NA 11.127299 6.476105 9.326335 11.455299 7.305461 2.411453 8.057230 11.398052 1.311910 8.623502 5.780685 NA 4.337454 9.295723 10.250235 9.242653 10.937885 9.920302 10.736682 12.575688 11.826771 14.711499 6.099632 9.644751 10.105867 9.541421 4.387204 3.896882 8.486128 12.378005 -1.495329 11.108882 4.435295 6.633844 4.633844 10.265696 12.147064 9.588040 11.537812 12.890760 6.331109 11.267150 9.983836 11.251915 10.684159 2.311910 11.935405 10.081045 1.311910 10.211057 10.023214 4.240894 4.362540 11.388540 9.774272 10.810337 10.273572 1.504570 10.814605 12.900831 11.301006 10.004407 10.087643 0.417310 0.417310 -0.120950 -0.151950 0.242640 0.976470 0.259340 1.711000 -0.673250 -0.589020 3.656900 0.192540 0.192540 0.260750 0.260750 0.260750 0.224990 -0.519590 1.757000 -0.278940 0.036935 -0.571500 3.656900 0.297240 0.076279 0.076279 0.418140 0.251050 -0.149650 -0.149650 0.219510 -0.560670 -0.988990 0.243110 0.213300 -0.576340 0.259340 -0.194870 -1.029500 -0.136260 -0.136260 -1.021900 0.241090 -0.136780 -0.136780 -0.124860 0.192540 0.192540 -0.154520 0.260750 -0.154390 -0.154390 0.224990 -0.519590 -0.519590 -0.233980 -0.278940 -0.278940 0.036935 -0.489840 -0.561960 2.021100 0.227000 -0.302630 0.436650 0.228230 -0.135490 -0.015604 -0.017713 0.193 0.193 0.224 0.224 0.225 -0.295 -0.234 -0.279 0.000 0.342 0.000 -0.559 -0.559 0.227 0.227 0.685 0.685 0.268 0.417 0.251 0.251 -0.135 0.000 0.220 0.220 -0.152 -0.152 0.245 0.245 0.400 -0.576 -0.195 -0.195 -0.136 -0.136 -0.056 0.882 -0.137 -0.137 0.000 0.000 0.193 0.193 0.224 0.224 0.225 -0.295 -0.234 -0.279 0.000 0.342 0.000 -0.559 -0.559 0.227 0.227 0.685 0.685 0.268 0.417 0.251 0.251 -0.135 0.000 0.220 0.220 -0.152 -0.152 0.245 0.245 0.400 -0.576 -0.195 -0.195 -0.136 -0.136 -0.056 0.882 -0.137 -0.137 0.000 0.000 8.70054792 0.82651798 5.33745064 10.89768295 12.09725126 5.05469222 11.18733586 9.52925016 9.38545282 -0.49553215 11.44377255 11.09790275 2.82649764 0.50456955 4.02811824 8.32154438 2.82649764 9.58070817 11.54124945 10.49537378 9.80319603 9.16633886 8.77485590 9.84885654 6.39937791 8.36874696 1.96399192 NA 10.59368010 1.82647730 5.69438436 9.15111931 9.77952107 9.74412341 10.62544649 1.67450585 8.79918155 3.75249171 7.52415146 13.35205849 8.60127569 8.53108392 3.93082248 7.07820739 7.74296553 1.31190994 3.78995873 NA 5.23248041 4.99785691 2.50456955 11.21385989 5.79918058 8.53798362 11.03764702 9.53246658 4.61308369 10.78938472 11.42918760 7.59995746 3.59202641 3.02812708 10.62155430 2.41145336 NA 4.45875602 0.08949815 12.110336 7.992401 9.676988 17.290983 9.946467 10.854671 12.398810 9.482556 9.238423 10.628682 12.983393 11.073942 8.486128 5.374925 4.613084 8.342188 11.858121 11.081517 12.069187 6.441198 13.466099 8.394825 9.315132 9.447808 10.398620 10.291908 5.654307 5.905440 9.355529 6.211919 -1.495329 10.318743 10.125697 8.033269 12.873613 11.134828 10.062024 6.537984 9.595996 7.478975 5.337451 11.357987 9.242653 10.266112 10.837436 9.323143 9.076313 8.807200 10.452563 8.122946 1.089498 9.122873 6.487554 12.378005 7.051455 11.108882 4.771347 11.434928 10.265696 8.229603 14.863641 10.392162 10.188433 11.805771 11.688661 2.896872 2.963992 10.183161 9.512989 9.435298 TCGA-AN-A04D 58 0 NA 52 breast stage iib t2 n1 m0 female 2008 NA NA infiltrating ductal carcinoma 2 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-06 8.323135e-07 8.33333333333333 14.2857142857143 3.57142857142857 40.4761904761905 33.3333333333333 9.3706083 9.3240554 11.1846712 7.2178385 8.6996727 7.9570341 9.0749528 10.1857416 10.5649389 12.4827026 11.1014740 10.4594363 0.5257682 12.0536136 2.2038276 10.1364015 4.4892218 9.5149982 13.1963577 6.0111736 NA 4.1107057 8.7165582 9.5559990 12.0809100 2.0111736 0.7887692 6.0612383 11.9479156 1.0111378 8.8267846 5.8762419 NA 3.4892218 8.9172041 9.6405291 8.4995864 10.0710963 9.8440625 10.7286041 4.9851771 10.7646281 14.7335531 7.8368854 9.8129963 9.7376340 10.5464479 5.0986343 -1.7963603 8.8682648 11.0263884 0.5257682 7.0680033 1.7887692 3.7887797 4.6956710 6.2482122 12.5389986 10.7071464 10.5522691 12.5304577 7.4564834 10.9670299 10.6838176 10.9427543 10.4990125 3.4132691 11.9316317 11.2478701 -1.7963603 10.2213220 9.3388854 5.7531017 2.9042529 10.9497020 10.9391621 10.8517257 9.0948417 3.9042529 5.1345536 11.9333321 10.2846351 9.9607909 11.4598788 1.2886e+00 1.3976e+00 -8.2865e-01 6.8812e-01 7.0101e-01 -8.3001e-01 7.2697e-01 -4.3885e-02 9.7064e-04 9.7064e-04 1.3060e+00 6.9452e-01 1.6006e-02 -5.6402e-05 1.1121e-02 1.1121e-02 -1.5191e-02 6.1552e-01 1.9201e+00 -1.6971e-02 3.3127e-02 -7.6962e-01 5.0819e-02 7.8080e-01 7.0817e-02 7.0817e-02 8.0745e-02 1.4207e+00 -7.4681e-01 -1.6567e-02 -7.9218e-01 -8.0003e-01 -7.9903e-01 -3.0540e-02 -8.3438e-01 -5.8731e-02 7.2697e-01 -4.3885e-02 -8.3276e-01 -1.1198e-02 -1.1198e-02 -8.2782e-01 7.1565e-01 7.1565e-01 2.3987e-02 -7.7592e-01 1.6006e-02 -7.8345e-01 2.6654e-02 1.1121e-02 3.7465e-03 2.5812e-02 -1.5191e-02 3.4395e-02 3.4395e-02 -1.2929e+00 -7.9603e-01 -8.0169e-01 -7.9653e-01 7.6710e-02 -7.6962e-01 5.0819e-02 5.2749e-03 7.0817e-02 5.7566e-02 4.3157e-02 1.3868e-03 9.9870e-02 9.9870e-02 0.197 0.000 0.000 0.000 0.000 0.000 -0.842 0.000 0.000 0.000 0.000 -0.770 0.000 0.000 0.000 0.000 0.000 1.289 1.289 0.000 0.000 0.000 0.000 0.000 0.000 -0.760 0.000 -0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.664 0.000 0.000 0.000 0.000 0.197 0.000 0.000 0.000 0.000 0.000 -0.842 0.000 0.000 0.000 0.000 -0.770 0.000 0.000 0.000 0.000 0.000 1.289 1.289 0.000 0.000 0.000 0.000 0.000 0.000 -0.760 0.000 -0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.664 0.000 0.000 0.000 0.000 8.4529310 NA 9.2926058 11.1965790 12.6002886 4.8799165 11.5537899 8.0200971 8.0997712 -1.7963603 10.3684103 11.5848887 7.6216702 NA 4.4892218 9.6232511 2.0111736 8.2536660 11.2833024 11.5445022 9.7405505 NA 9.5246181 9.7892496 5.6384446 0.2037650 NA -1.7963603 10.4505581 7.8018700 5.0864611 8.7116123 8.9452846 10.3913800 11.2543465 -1.7963603 9.4967144 5.9720010 7.6446869 12.6465020 7.7351992 7.9637059 NA 5.8973034 8.9085860 5.1345536 3.3737456 -0.7961098 2.1106973 1.7887692 1.3737317 10.9433873 3.0111736 5.6956710 10.1404556 9.9909040 3.8762419 9.4380362 10.7550452 5.5347340 3.4892218 2.7273759 10.2749448 0.2037650 7.5347348 6.2859662 7.2482113 7.885056 9.378119 9.004717 12.053614 11.216091 11.652450 6.011174 9.087225 9.100771 10.086461 12.719579 9.141927 8.868265 8.991720 2.203828 8.664273 11.433087 10.6573454 11.4261597 6.2859662 16.0613542 9.0856735 0.7887692 10.7791205 9.2945916 9.5793784 3.2038119 6.0111736 11.1014740 9.5891408 NA 9.2247976 10.0594648 10.0898532 12.0892280 9.7066493 9.7897190 6.7273800 9.8185274 4.8037282 1.6632535 10.5261542 8.4995864 9.5734149 10.5641160 10.4044097 9.8740312 10.6147988 10.0271849 8.6142689 NA 9.7370695 6.7501335 11.0263884 6.5701396 7.0680033 6.3227592 10.2812476 6.2482122 7.7400263 13.9378127 9.5206648 9.7560063 11.8929420 12.1668039 1.0111378 1.4773147 10.1308547 8.8584535 8.7293383 TCGA-AN-A0AJ 79 0 NA 303 breast stage iib t3 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 4 NA 1 2 2 2 6 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.664627e-06 6.589149e-07 26.865671641791 25.3731343283582 0 28.3582089552239 19.4029850746269 10.0886520 10.0142551 11.2871298 8.8472475 9.2257593 8.3800666 9.3400165 10.1169026 9.4655474 13.6016840 10.5352390 10.9391123 6.7781691 12.5113462 3.8732423 8.5600294 4.3878174 9.6215726 9.3199042 12.8885157 2.5064496 13.2250385 4.0658911 9.5783463 11.7238443 5.9796321 2.0658825 11.9598395 12.1243629 -1.7413002 9.1242663 6.5299958 -0.7415414 4.2585340 10.3624765 11.4250100 9.5554492 10.8283887 10.2988228 10.2833264 5.0267160 10.0378421 14.5408794 8.0107295 9.2988228 10.8990039 11.1794441 3.3029331 0.2585792 9.2010474 10.6267666 NA 10.6446650 5.9520190 7.1165145 6.0067266 10.2210676 12.5372002 10.4468127 11.6206138 15.0371235 6.8207751 11.0155062 10.6966179 10.9086872 10.6430470 4.9450317 12.6975198 10.8563528 -1.7413002 10.2141830 10.1223321 3.9035397 5.1040221 8.9424048 9.9589727 10.3512902 11.0437811 -0.7415414 4.9864519 11.7660799 11.7014765 10.1529719 8.6753304 3.65690000 1.02140000 -0.00954260 0.41195000 0.08536500 0.39911000 0.73549000 3.65690000 -0.94445000 -0.94445000 2.30350000 0.00940820 3.65690000 0.32914000 3.65690000 -0.02315500 -0.01092200 0.40711000 -0.46982000 0.00000000 -0.26733000 -0.44674000 -0.01009400 0.97523000 1.13310000 -0.00097017 -0.00097017 3.15510000 -0.43843000 -0.46312000 -0.29449000 -0.00954260 0.69055000 -0.74508000 0.39911000 0.42267000 0.73549000 0.77791000 -0.03789800 0.82177000 -0.47702000 -0.94445000 -0.52092000 -0.52092000 0.00315020 0.01698500 -0.46589000 -0.43875000 0.32914000 0.35626000 -0.47607000 -0.47067000 -0.94576000 0.00593630 -0.45854000 -0.50017000 -0.01270900 -0.01890200 -0.24545000 -0.43333000 -0.44674000 -0.01009400 -0.02096100 -0.51208000 -0.00097017 0.22037000 0.39745000 -0.42887000 -0.43561000 0.000 0.000 0.329 -0.471 0.000 0.000 -0.500 0.000 -0.245 0.477 0.052 -0.447 0.000 -0.408 0.000 0.000 0.000 0.150 0.589 0.723 0.723 0.000 -0.436 -0.451 -0.451 0.000 0.412 -0.386 -0.386 0.399 0.399 0.719 0.000 0.000 -0.410 1.103 2.047 -0.488 0.000 0.697 -0.239 0.000 0.000 0.329 -0.471 0.000 0.000 -0.500 0.000 -0.245 0.477 0.052 -0.447 0.000 -0.408 0.000 0.000 0.000 0.150 0.589 0.723 0.723 0.000 -0.436 -0.451 -0.451 0.000 0.412 -0.386 -0.386 0.399 0.399 0.719 0.000 0.000 -0.410 1.103 2.047 -0.488 0.000 0.697 -0.239 8.3605087 6.9624368 6.1593991 10.8390271 11.1633558 7.5061997 11.1639200 8.1022655 8.2541306 1.4284640 11.7121895 11.5754976 3.0658825 -0.1564985 2.0658825 8.5288284 4.0398929 11.3301630 12.3183844 10.7548875 9.8288630 2.9589726 8.6636744 9.8307595 7.0033672 3.6508450 2.0658825 NA 10.9220911 7.0267171 6.0067266 9.0008425 4.2127327 10.3578776 11.1676761 3.5064623 9.2025130 2.4284640 7.4184042 12.1814890 7.1503170 7.6594123 -0.7415414 0.5804350 7.9185288 4.1165145 1.2585189 2.5064496 7.0300226 5.7083418 2.9023824 11.9773869 3.2127250 7.3878157 10.5585995 10.2984802 5.2472174 9.9607057 13.6611787 8.9710601 5.9023896 4.5253172 10.2933320 2.1654296 -1.7413002 0.2585792 3.9864564 13.559519 7.094583 8.598383 12.511346 9.198112 11.504383 12.888516 11.014881 9.178886 10.757133 15.455010 11.094781 9.201047 10.381684 1.580483 8.704583 11.985709 11.229717 11.582010 5.734265 12.077312 8.609472 6.742349 8.939771 9.763352 10.019623 7.189270 4.843497 10.535239 4.813119 1.428464 10.366077 5.580462 8.750065 9.480724 10.590010 10.613609 8.958105 9.655673 11.600191 6.801565 11.891293 9.555449 10.555449 10.562028 10.633844 9.246508 10.317201 10.807355 8.316525 3.258534 8.879321 7.249715 10.626767 6.854723 10.644665 5.667923 10.648702 10.221068 7.665801 13.677769 10.326304 10.219621 12.470269 10.228639 3.873242 1.717956 10.158268 10.061857 9.308382 TCGA-AN-A0AK 76 0 NA 224 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 4 NA 1 2 1 2 2 2 NA NA 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 4 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 2.132803e-05 8.808651e-06 25.9090909090909 6.36363636363636 1.93181818181818 40.1136363636364 25.6818181818182 9.5854546 9.7534511 10.1272049 9.5830875 8.6471835 9.1009734 11.4551857 9.7583547 10.1031776 14.2680155 9.7743501 10.7340242 NA 13.4209700 3.9957558 8.2654960 6.0697537 8.1379958 13.2297521 13.1980713 0.3327366 13.7862741 NA 9.5719898 11.1824548 7.0424474 NA 9.2113510 10.7128893 -1.2522259 8.8379391 6.0697537 -1.2522259 4.1053764 9.2496639 10.2220396 10.0453161 8.7826255 9.8233058 11.0993180 12.8984465 10.5155972 14.3950320 7.9511990 10.0573030 11.4672154 11.5359331 3.0697537 5.4343280 8.9202540 9.4612132 NA 10.3858099 3.7020258 4.6785621 5.0146142 10.8058183 11.6277927 10.4787212 10.1347668 12.8474210 7.8112218 11.2456784 9.9899885 10.5913552 11.5743751 4.0697537 11.6919896 8.9850364 NA 10.1239520 7.9327020 1.9177373 4.5551842 11.8080159 10.5287764 10.3261992 9.6562193 -0.2522259 4.2713883 11.0043302 9.8854581 6.7701948 8.9742388 0.4327700 0.3779200 0.0293250 0.0043021 -0.0663860 0.3396600 0.0365120 0.0114000 0.0886920 0.0455400 0.9027100 -0.3745900 -0.3750900 0.0297470 0.0297470 0.0129340 0.0342540 0.0209030 0.0454240 -0.3692900 -0.3498500 0.0577960 0.0577960 0.0577960 -0.3551000 0.3574300 0.3574300 0.0425900 -0.3554400 -0.3554400 0.0000000 -0.7917700 -0.4370200 -0.0927420 -0.4087200 -0.4020700 0.0365120 0.0114000 0.0114000 -0.0386630 -0.0369460 0.0886920 -0.5549800 -0.5401700 -0.1050000 -0.1050000 -0.3750900 -0.3358300 0.0523830 0.0297470 -0.8021100 -0.8021100 0.0342540 0.0209030 0.0209030 0.0329860 -0.3692900 -0.3692900 -0.3498500 -0.7761700 0.0577960 0.0577960 -0.2315300 -0.3551000 0.3574300 0.0425900 -0.0238400 -0.3359500 -0.3359500 -0.375 -0.375 0.000 0.000 0.000 0.000 0.000 -0.369 -0.350 0.000 -0.776 0.000 0.000 -0.209 -0.209 0.002 0.357 0.075 0.431 0.000 0.000 0.000 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 -0.075 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 -0.540 -0.105 -0.215 -0.215 -0.375 -0.375 0.000 0.000 0.000 0.000 0.000 -0.369 -0.350 0.000 -0.776 0.000 0.000 -0.209 -0.209 0.002 0.357 0.075 0.431 0.000 0.000 0.000 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 -0.075 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 -0.540 -0.105 -0.215 -0.215 7.8796837 -1.2522259 7.2985731 10.3916828 12.5992829 6.0978825 11.4286256 7.6738263 9.1127163 NA 10.9171253 11.0427259 0.7478600 -1.2522259 0.3327366 8.5648103 1.3327938 9.7701944 12.1200115 11.4850739 9.2976112 0.3327366 6.9572797 9.3898782 5.8563508 5.9474978 2.4482667 NA 9.0239509 5.5027157 8.0943401 10.0046250 3.0697537 9.9106522 10.3703361 2.4482667 9.6026950 NA 5.3024141 12.5629096 6.1315319 7.6335228 -1.2522259 6.6726389 8.5160108 NA 3.8771062 NA 5.0697537 2.7514209 1.0697709 12.1104554 2.6547105 9.3374776 10.4325752 10.1179690 4.0697537 8.5583981 12.3236022 8.2792080 5.9862312 3.2713958 10.5897840 1.3327938 NA 2.0697709 3.0697537 12.764388 7.959715 9.142289 13.420970 10.434327 11.006098 13.198071 12.807931 9.369878 10.641128 12.732423 10.600356 8.920254 8.308159 1.747817 7.902645 11.406038 11.5999659 13.2231167 5.7590546 12.6992907 8.4774474 4.2713883 10.0753793 9.8543895 10.5569315 5.0876750 9.3205269 9.7743501 7.0052147 -1.2522259 10.2481706 6.9957536 7.3587409 8.9838407 10.5328703 11.1774948 8.6274099 9.7136109 9.6312336 4.5291838 9.5310705 10.0453161 9.8751762 10.8605919 12.1332846 9.9039097 10.4308211 10.8202942 9.1119611 4.6304695 8.8344802 4.5551842 9.4612132 5.7812495 10.3858099 5.0146142 10.7453589 10.8058183 7.4859186 13.7042027 10.4808419 9.6441589 11.5406169 10.9766453 -0.2522259 NA 10.3449480 10.2164506 9.0742560 TCGA-AN-A0AL 41 0 NA 227 breast stage iiib t4 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.733986e-06 3.81477e-07 9.52380952380952 20.6349206349206 3.17460317460317 41.2698412698413 25.3968253968254 9.1115011 9.3038837 11.5760781 8.4472229 8.8845515 9.8185488 9.5653858 10.9239470 12.7418544 13.6761526 9.4480548 10.6429847 -1.3125809 11.3845196 1.4946716 11.9909729 5.2108953 8.6745987 11.1138617 9.2552909 -0.3125809 9.3374890 2.2722920 9.9688361 10.2895697 6.3738361 1.2723219 11.1650021 10.9888310 1.2723219 8.4736043 8.1135995 NA 6.4488861 10.2605087 10.9149507 8.7166219 9.2467119 8.7069256 10.4062957 NA 6.5265384 16.0111197 6.4701366 9.2628740 10.4101423 9.3148687 2.3877761 NA 9.2390431 10.7083148 -0.3125809 10.8793193 5.6298491 6.0623743 5.4686941 10.2481453 11.7769508 9.1364834 12.2863178 13.3958260 8.2797916 10.2638192 9.7339883 11.1879278 10.3020447 3.7747976 11.6344238 9.7055349 2.2722920 10.7276246 8.9681057 2.6293799 6.0271850 11.1582478 9.9933966 10.1716542 9.1406054 -1.3125809 6.3020448 13.1807525 11.9577762 9.3929671 10.1198767 0.12520000 0.53169000 -0.72914000 0.72943000 0.00638710 0.05494500 -0.67426000 -0.74455000 0.02104300 0.02104300 0.71923000 0.14043000 -0.70720000 0.37891000 0.37891000 0.37891000 1.97370000 0.68906000 1.18170000 0.01000600 2.43860000 -0.71809000 -0.71809000 0.05167200 -0.00138580 -0.00138580 -0.00138580 0.00917050 -0.70890000 0.12520000 -0.67325000 -0.72914000 -0.04238100 -0.73731000 -0.74342000 -0.75219000 0.03863000 -0.75379000 -0.02027500 0.79123000 0.02651400 0.02104300 -0.72208000 -1.29290000 0.03014000 -0.71568000 -0.70720000 -0.80036000 -0.73950000 0.37891000 0.37891000 0.37891000 -0.72261000 0.68906000 -0.02315500 -0.61066000 0.00000000 0.00000000 0.00861350 -0.04604100 -0.71809000 -0.71809000 -0.75158000 -0.69622000 -0.00138580 0.00917050 -0.00581400 -0.00055444 -0.73591000 0.000 0.000 -0.348 -0.348 0.000 0.000 0.000 0.000 0.000 -0.589 0.000 -0.718 -0.718 -0.735 -0.735 0.000 0.000 0.125 0.125 0.000 0.000 0.000 1.102 0.000 0.000 0.000 0.000 0.000 0.000 -0.730 -0.730 0.000 0.000 0.765 0.000 0.000 0.000 -0.669 0.000 0.000 0.000 0.000 0.000 -0.348 -0.348 0.000 0.000 0.000 0.000 0.000 -0.589 0.000 -0.718 -0.718 -0.735 -0.735 0.000 0.000 0.125 0.125 0.000 0.000 0.000 1.102 0.000 0.000 0.000 0.000 0.000 0.000 -0.730 -0.730 0.000 0.000 0.765 0.000 0.000 0.000 -0.669 0.000 0.000 0.000 8.5122937 NA 7.7371831 10.8361291 11.9767774 6.1256284 11.1696386 9.6250103 8.9771001 3.0796512 13.4760022 12.0622235 2.4946972 NA 1.0092755 7.5390836 3.7317263 10.8367644 12.0567959 10.2054961 8.4135530 5.0448880 7.8319931 9.9004391 8.4084342 10.8481516 2.0092755 3.4946844 10.8916003 2.2722920 6.5265384 9.4015803 4.2108953 9.6723797 9.6929594 3.5453136 9.6922575 1.0092755 8.0115152 13.0264193 6.4488861 9.3579911 1.6873295 0.6873295 6.9257396 4.3597601 4.8572595 NA 6.2108973 1.4988125 4.9911136 11.0165706 4.2108953 11.2086899 10.0007848 10.0574773 6.0967257 9.9101297 13.7580009 10.5425927 3.0092576 4.8166202 9.3597601 1.0092755 6.1136005 -0.3125809 6.9634591 12.099508 7.338386 9.054749 11.384520 10.250531 11.355998 9.255291 10.914349 9.435528 10.981094 12.868487 10.242883 9.239043 8.154941 3.009258 7.545316 10.898615 10.832630 13.043168 5.146765 15.242235 9.045986 6.442222 9.081798 8.283525 9.551103 7.839620 5.785367 9.448055 3.687329 7.422045 10.003616 6.726254 8.856633 11.396203 10.269947 10.585558 8.549972 8.815329 9.296514 7.569978 10.026767 8.716622 10.331191 10.459649 11.695588 11.145229 10.793571 10.051469 9.076428 NA 10.424045 7.872210 10.708315 10.025514 10.879319 7.641531 9.758797 10.248145 7.234229 13.494438 10.092476 11.542398 12.228552 10.305261 8.722134 4.387776 9.795206 9.848467 8.413553 TCGA-AN-A0AM 56 0 NA 5 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 4 NA 6 2 5 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.144431e-06 3.467973e-07 16.2790697674419 25.5813953488372 2.32558139534884 27.906976744186 27.906976744186 8.6573871 9.3973396 11.2394397 8.7123884 10.5674304 9.3951001 9.8347679 10.1989285 11.4757347 13.6764160 10.0005863 10.5345718 5.4107040 11.4377951 3.4341612 9.9892477 6.7278946 7.7928508 10.5308365 12.2623516 -1.5199417 13.6509879 6.0649303 10.3055385 10.6808662 6.3065156 0.4799548 11.1537382 10.5574509 0.4799548 8.5270915 8.0268620 -1.5199417 4.2078850 9.9818047 9.5799728 8.9104200 9.8550070 9.0103740 9.8153578 3.4799678 11.2199591 14.8489343 7.5135555 10.4707771 10.1011036 10.1156856 4.2348538 4.3379465 8.4729061 11.8069587 NA 10.1510663 4.6697921 6.2078889 5.1804065 10.0422100 12.1371743 10.3124620 11.2210131 12.2944499 8.4771471 10.3928569 10.0858081 10.5450470 10.9559543 4.8294031 11.6805597 9.8419113 NA 10.5040684 9.0488737 2.7286607 4.6697921 11.0171860 10.3124620 13.6077604 9.3207455 1.6498913 6.6894208 12.4694508 11.4003204 9.7057775 9.1065891 2.3657000 0.4819900 0.0516720 0.2090100 -0.0731380 2.0846000 -0.0673300 2.5231000 -0.3711000 -0.3711000 0.1509900 0.0224440 2.1540000 -0.0637030 -0.0637030 -0.0637030 3.6569000 3.6569000 0.2390700 0.2585500 3.6569000 -0.3799900 -0.3970800 0.5114100 0.5436500 0.1057000 0.1057000 0.6762300 -0.0760120 -0.2335700 0.0049969 -0.1961500 -0.3403300 -0.0731380 0.2581900 0.2581900 -0.0673300 1.0222000 -0.3316800 0.2152600 -0.2386300 -0.4041600 -0.2083400 -0.2083400 -0.2083400 -0.3721100 0.1203500 -0.3883900 -0.1643400 -0.0637030 -0.0637030 -0.0637030 0.1104300 -0.2968800 0.8510600 -0.0834650 -0.0441440 -0.0258930 0.0297470 0.0062481 -0.3799900 -0.4082700 -0.1823100 -0.0778780 0.1057000 0.1212300 -0.1325100 0.1028500 0.1339100 0.000 0.000 0.000 0.000 -0.297 -0.297 0.000 0.000 0.000 0.553 0.000 -0.340 0.000 -0.182 -0.182 0.000 0.106 0.353 0.353 -0.001 0.305 -0.133 0.103 0.152 0.000 0.000 0.157 -0.267 0.000 0.632 0.632 0.274 0.274 -0.010 -0.225 -0.225 0.146 -0.208 -0.208 -0.198 -0.198 0.000 0.000 0.000 0.000 -0.297 -0.297 0.000 0.000 0.000 0.553 0.000 -0.340 0.000 -0.182 -0.182 0.000 0.106 0.353 0.353 -0.001 0.305 -0.133 0.103 0.152 0.000 0.000 0.157 -0.267 0.000 0.632 0.632 0.274 0.274 -0.010 -0.225 -0.225 0.146 -0.208 -0.208 -0.198 -0.198 9.24317994 6.93117836 8.09099259 10.28086749 12.67687699 6.60801377 11.23088387 7.72168845 8.79665648 NA 11.06844799 12.37468113 1.93941466 3.33795366 1.93941466 7.87871124 5.42248195 12.28520759 11.92252234 11.55226769 9.50094741 3.00353028 8.53931199 9.57206390 5.92291141 11.34879011 5.88935915 -1.51994173 10.06116811 3.90623643 7.06116811 8.46580962 7.54605637 11.15037594 10.22941801 1.47995483 9.22311890 7.56477598 7.15239336 12.98695689 8.06680713 6.76537031 -1.51994173 6.86367213 7.83090684 3.87228703 2.18040251 0.06488285 5.13817963 2.64989133 4.54605483 11.85853337 1.28729498 8.53253554 10.88643835 9.92187425 5.91459562 9.50302886 14.27418032 7.99566767 4.62971215 3.83751945 10.18689519 2.18040251 -1.51994173 1.80190361 3.38685232 12.975959 7.792851 8.696713 11.437795 10.512702 11.731894 12.262352 16.305777 8.711189 13.082716 13.849326 9.932724 8.472906 7.701555 4.287325 8.136392 10.424680 10.581615 12.342605 6.513391 13.538635 8.539312 6.138180 8.169966 7.993695 8.513336 6.931178 8.709988 10.000586 9.557451 -1.519942 10.183871 7.518887 9.334727 10.500600 10.132364 10.532875 8.544710 9.463674 8.533893 6.769986 10.445939 8.910420 10.833666 10.558118 10.443225 9.729674 10.094677 9.955701 8.398831 1.064952 9.045812 6.906233 11.806959 7.148853 10.151066 7.713587 10.071022 10.042210 7.613752 13.780356 10.694287 10.420281 12.245461 10.686371 1.287295 NA 9.338726 9.667938 8.496776 TCGA-AN-A0AR 55 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 1 1 0 0 0 0 0 2.670339e-06 6.935946e-07 6.06060606060606 26.2626262626263 3.03030303030303 37.3737373737374 27.2727272727273 8.1323090 8.5621054 10.8873337 8.2221694 9.7995617 7.1098829 9.5265675 9.1913509 11.6672743 12.1624724 10.8506105 10.0448749 -0.4713287 11.1673446 1.9881211 8.6227602 8.4174255 9.8048069 12.8712433 8.9113066 -1.4711287 12.1321929 11.0374676 10.5513519 10.8258853 3.3866592 2.6986186 8.6280303 11.0712307 2.2291264 8.0620121 7.1098829 3.6161459 2.6986186 9.4995073 9.0344939 9.5482732 9.8889809 8.8884322 10.8598793 0.1137005 8.5907285 15.0719258 7.5827712 8.3741409 11.0087152 10.4408233 4.2011084 -0.4713287 8.5593496 9.7356968 NA 8.8347441 4.5947695 3.5730715 5.0044160 9.5510503 12.0667501 10.6582875 10.9679939 12.4074997 8.2151830 11.3633510 11.2480713 10.7332536 10.2523434 5.4475461 11.2037574 8.7694739 -1.4711287 10.5723933 9.1922405 3.1748378 3.4828741 8.4310575 10.5240963 11.1143492 8.9653941 0.5286713 8.5385110 11.7576514 11.2041985 10.2814812 9.4879600 0.05850900 -0.90183000 0.02090300 0.01628600 -0.00097017 1.64700000 0.04826200 0.79491000 -0.03190500 -0.03190500 0.76178000 1.55860000 0.02482900 -0.00664320 0.03905400 1.63130000 2.17420000 -0.86137000 0.45037000 0.00388540 0.73360000 0.02174400 -0.80534000 -0.82879000 0.29867000 -0.04265200 0.01293400 -0.85979000 -0.81326000 0.03481800 -0.90319000 -0.84979000 -0.87634000 -0.87782000 0.04755200 -0.84887000 2.69360000 0.79491000 -0.90426000 0.00360760 0.05067700 -0.96316000 1.47470000 1.47790000 0.84514000 0.07671000 -0.02432900 -0.08943400 -0.86955000 0.03905400 -0.02096100 -0.04780100 0.87587000 -0.00774820 -0.00512270 -0.86232000 0.15173000 0.94547000 -0.86024000 -0.86923000 -0.07214000 0.01796300 0.69727000 -0.82513000 0.01293400 0.04570800 -0.89312000 0.02974700 -0.04428000 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 0.000 -0.845 -0.846 -0.846 0.000 0.000 -0.083 0.764 0.000 0.000 -0.843 -0.843 0.000 -0.860 0.000 0.000 0.000 0.000 -0.850 -0.850 -0.858 -0.858 -0.423 -0.849 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.000 -0.220 -0.220 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 0.000 -0.845 -0.846 -0.846 0.000 0.000 -0.083 0.764 0.000 0.000 -0.843 -0.843 0.000 -0.860 0.000 0.000 0.000 0.000 -0.850 -0.850 -0.858 -0.858 -0.423 -0.849 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.000 -0.220 -0.220 7.7884260 NA 6.2081622 12.3038812 11.4113255 7.2825343 10.7363070 8.7649717 8.7858229 -0.4713287 11.0607948 10.4006300 5.2429264 NA 5.0522463 10.0320113 3.5286838 7.7550945 11.4924817 10.2116770 10.6860294 -1.4711287 8.9591349 11.4937452 5.1285945 6.3360370 2.2291264 2.3360263 9.7023595 1.5286713 6.1725395 9.4453083 9.8779637 10.2692728 9.6663140 1.6986186 10.3568189 5.8862355 6.6682340 13.9430704 9.1424719 6.8906267 0.1137005 1.1136338 8.4219840 6.6528034 2.6161459 NA 2.9209983 3.4374941 2.4355753 11.3500578 2.9881211 9.3174009 11.6621458 10.5991389 4.1433934 10.0615254 11.1498186 7.8071321 2.7766094 2.9881211 11.0642009 2.9881211 2.2291264 3.2835662 5.1580381 12.994682 8.441572 9.260001 11.167345 10.327154 9.947589 8.911307 11.153021 10.319031 11.266141 12.001246 12.184772 8.559350 6.728355 5.877411 7.528682 9.040435 11.2442155 12.7486072 4.2835736 14.6671127 7.8278673 7.6579658 10.4204662 7.7526844 10.8080928 5.7478519 4.3615719 10.8506105 6.0600647 0.8506394 10.1940183 5.9633100 8.6682851 11.8293210 9.9845234 9.2195533 8.5994338 8.7884257 7.8301786 3.9549500 9.9399974 9.5482732 9.7789809 11.0839906 11.8198532 11.2538357 11.2044190 11.0394466 9.2403494 -1.4711287 10.8116174 5.1868927 9.7356968 7.3001722 8.8347441 7.0871032 11.0119944 9.5510503 7.9986903 15.6900703 9.8551119 11.2623334 11.1924629 11.4174257 -1.4711287 3.1136505 10.4634790 9.8381589 9.7350863 TCGA-AN-A0AS 70 0 NA 10 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 4 white not hispanic or latino 3 2 4 NA 1 2 5 2 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 8.323135e-07 1.040392e-07 25.9259259259259 18.5185185185185 0 33.3333333333333 22.2222222222222 10.7139515 9.5700096 11.7562801 9.2906345 7.9582900 8.9477973 9.9944236 9.8790525 10.6067385 13.1206446 11.0206292 10.7007334 -1.1500808 12.0176538 2.6571140 12.8646575 5.4347283 8.4663143 10.3976238 13.0764033 -0.1502409 13.3550186 7.4043539 9.5938423 11.1581043 8.2356275 2.1716872 8.9712987 10.5992158 2.0197019 8.3985872 9.7619062 0.4347750 3.6571255 10.3772423 10.6897564 9.2916719 8.4177213 9.3723469 10.8508215 8.3927970 9.1351675 15.3151723 6.5723683 9.0171834 10.5789612 10.5142126 2.1716872 NA 9.0334007 9.7385086 NA 11.0854804 5.8721343 6.4496786 6.2927081 10.4727323 11.1595258 10.4129615 12.5460809 12.0599800 8.3416184 11.3050925 10.9569431 11.5137681 11.4117692 4.5776886 12.4235308 11.4208069 2.1716872 10.6893628 9.9995124 2.7566604 5.6179508 10.7151119 9.9771149 9.9438430 11.2385898 3.8941581 5.9687060 12.6385856 11.4480505 9.6490469 9.5026103 0.5352000 0.2873900 0.2999500 0.2156000 -0.1330200 0.3618200 -0.0036011 -0.1118200 -0.7740500 2.1618000 1.4117000 0.2660800 0.5516000 0.1386500 1.0536000 1.0536000 -0.0564420 2.7578000 0.0077783 -0.0762780 -0.0243880 -0.4039600 -0.4039600 -0.4266900 -0.1080200 -0.1080200 -0.1080200 1.0195000 -0.0392580 -0.0859880 -0.1467000 0.2999500 -0.7285300 -0.1171700 -0.2575700 -0.1153500 -0.0036011 -0.1118200 -0.1118200 0.3185100 -0.4671700 -0.7965300 0.0834960 0.0940910 0.0501080 0.0501080 -0.3748200 0.7347300 0.1386500 0.1386500 -0.0630320 -0.0630320 -0.0564420 -0.4545800 -0.4545800 0.0077783 -0.4376700 1.7342000 -0.0243880 -0.0756120 -0.4039600 -0.4039600 0.2314800 -0.1080200 -0.1080200 0.8445500 0.1940600 0.2009100 0.2009100 0.266 0.000 0.139 0.000 0.000 0.000 0.672 0.000 0.000 0.000 0.000 -0.404 -0.404 0.000 0.172 -0.108 -0.108 0.535 0.535 0.814 0.000 0.194 0.201 -0.147 -0.147 0.300 0.300 -0.133 -0.133 0.362 0.246 0.000 -0.108 -0.137 -0.456 -0.774 0.638 0.000 0.000 0.000 0.000 0.266 0.000 0.139 0.000 0.000 0.000 0.672 0.000 0.000 0.000 0.000 -0.404 -0.404 0.000 0.172 -0.108 -0.108 0.535 0.535 0.814 0.000 0.194 0.201 -0.147 -0.147 0.300 0.300 -0.133 -0.133 0.362 0.246 0.000 -0.108 -0.137 -0.456 -0.774 0.638 0.000 0.000 0.000 0.000 8.3030359 NA 6.2927081 10.5292454 10.6881814 5.7426422 11.5397632 8.8884921 7.8866806 NA 12.6775049 11.7151622 NA NA 3.3091907 8.3214407 2.3092053 10.4148673 11.5046251 10.4791219 9.2029121 6.6113170 7.0494380 10.1357454 4.7324103 4.9372267 1.1717192 NA 10.6607385 0.8497591 6.8609926 9.0725603 4.2073150 10.6026978 10.8017784 -0.1502409 8.1024309 NA 7.2117092 13.1994612 7.5945993 7.2160872 0.8497591 7.0737667 6.8665730 0.4347750 4.2760276 NA 3.3091907 2.9372314 NA 12.2151309 0.4347750 6.9158543 10.6866046 9.5133233 3.8039606 8.7385085 11.8066859 8.2182716 0.8497591 4.4043514 11.4891060 5.5221907 -1.1500808 NA 0.4347750 13.117408 4.577689 8.002050 12.017654 10.186272 10.118307 13.076403 10.363986 9.735462 10.687393 13.143524 10.797767 9.033401 8.964809 NA 6.597959 12.848003 11.099175 13.644080 2.550211 13.705362 9.559694 4.242084 8.666749 7.009637 10.842013 6.442222 9.556261 11.020629 5.493622 1.657137 11.548470 8.469985 7.401089 12.257697 9.998242 12.296719 7.162648 9.401473 10.399550 2.550211 10.774062 9.291672 9.774578 10.048824 10.816992 10.861342 10.947139 10.610901 8.993148 8.434728 8.900036 6.267618 9.738509 2.657114 11.085480 9.398587 9.880432 10.472732 7.404354 15.408126 10.124726 10.271304 12.721959 10.403395 NA NA 10.456170 11.764711 9.599635 TCGA-AN-A0AT 62 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 9 5 1 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.913097e-06 6.242351e-07 6.86274509803922 15.6862745098039 3.92156862745098 45.0980392156863 28.4313725490196 10.1795362 8.8717041 11.4637517 9.7456083 8.7552648 9.4088282 7.0352027 11.2287147 11.5173703 12.8827593 9.7412415 10.5575236 -0.2095616 10.8616815 2.1123665 9.2040705 6.8493363 7.6730857 6.8016696 6.8238653 -1.7943573 6.4908830 8.1509242 9.4167602 10.0770005 5.8421039 1.2054551 8.9093663 11.0509702 -0.2095616 10.5737137 7.7829091 2.3754009 4.2278489 9.0796930 10.6963310 9.1553068 8.5431022 9.9287145 9.5217618 3.0128368 8.6700259 14.4471654 8.0371993 10.5500535 10.5217617 6.9933823 4.5453321 NA 9.6359326 9.6212218 NA 8.1347384 7.3087677 6.1421173 6.8201905 9.7600690 12.5875637 9.3450315 10.7862098 13.1790430 8.4710952 11.3514123 11.0124264 11.2942684 10.5983342 5.1002965 11.7756917 7.1450589 4.7600666 10.4453770 9.7653352 3.6107945 3.9868387 8.5464431 10.0560577 11.0403462 9.7107956 0.2055176 5.6063593 12.3829776 11.0852548 9.9351009 9.6291214 0.0389130 0.4648500 0.1632500 0.0567980 0.0298880 -0.6338000 1.7623000 0.0382060 -0.6483700 0.0223040 -0.0070576 0.8982900 -0.6420800 0.1402800 0.0258120 0.1626500 -0.0716060 -0.6459300 -0.5215400 0.0434400 0.6630900 -0.6850600 -0.4331100 -0.0572500 -0.3082700 -0.0396650 -0.0659840 0.0000000 -0.6750800 -0.3407900 -0.6992900 -0.6214000 -0.6761900 -0.6169100 -0.6338000 -0.6338000 0.1719600 0.0382060 1.2181000 0.0069435 -0.6595700 -1.2929000 -0.4207600 -1.2929000 0.0111210 -0.6629100 -0.6482800 -0.6622600 0.0026357 0.0258120 -1.2929000 -0.6626300 0.0182430 0.0012481 -0.6709500 -0.6088300 0.0083756 0.0083756 -0.6776800 0.0061090 -0.6850600 -0.4331100 0.6511200 -0.3170400 -0.6753600 -0.6848700 0.2861200 0.0108420 -0.7062100 -0.642 -0.642 0.000 0.000 0.000 0.000 -0.508 0.000 0.000 0.000 0.000 -0.664 0.000 0.646 0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.623 -0.623 -0.634 -0.634 0.000 0.000 0.000 0.000 -0.648 0.000 0.000 0.000 0.000 -0.108 -0.642 -0.642 0.000 0.000 0.000 0.000 -0.508 0.000 0.000 0.000 0.000 -0.664 0.000 0.646 0.646 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.623 -0.623 -0.634 -0.634 0.000 0.000 0.000 0.000 -0.648 0.000 0.000 0.000 0.000 -0.108 9.0120297 NA 6.3399070 9.8072509 12.0193615 6.0127072 10.0059756 9.1979796 7.6473246 -0.2095616 12.8937305 11.1906604 3.2054864 NA 3.4908781 8.8384753 3.2498700 9.4978018 11.5612442 10.7083119 8.9469472 0.7904384 8.9308464 9.5908033 6.2444000 5.9265783 2.7904384 1.3754009 11.4684558 4.0881246 7.4414943 9.4020824 6.7523740 9.1529051 10.6050252 2.1123665 10.4734373 4.9334027 8.5274082 13.6667038 8.2250710 8.0650148 -1.7943573 1.9059285 6.9093843 5.2054785 2.2054864 -1.7943573 5.9736641 1.2054551 3.9868387 10.9960323 3.5630361 8.3100788 11.1314054 11.1859768 5.3754044 8.5341550 13.0458647 10.3447117 5.5001009 4.2054785 11.6197690 0.5273707 -0.2095616 2.2929290 6.6148718 13.460093 9.022464 9.112371 10.861682 9.494923 11.498089 6.823865 11.918115 9.982324 11.133017 13.043601 12.545052 9.635933 8.991750 5.216707 8.175586 10.166568 10.402390 12.235112 6.350138 13.846710 8.767703 7.809106 8.197002 5.545329 9.275601 6.429482 4.490885 9.741241 1.527421 NA 10.870150 10.497514 9.840223 11.682353 9.967031 10.427067 8.650971 9.943572 8.435501 7.213909 10.896890 9.155307 10.252604 10.644532 12.928661 11.518080 12.007694 10.295593 8.905920 NA 8.433481 6.287629 9.621222 7.311389 8.134738 5.112371 9.833748 9.760069 8.371957 14.813186 10.327014 10.787152 12.320280 11.248678 4.729042 2.012819 10.490882 10.536397 8.818349 TCGA-AN-A0FD 71 0 NA 196 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 NA 2 2 1 1 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 2.427581e-07 9.67741935483871 16.1290322580645 0 45.1612903225806 29.0322580645161 10.20302908 9.46644726 11.64783744 8.45875274 7.99666668 9.04242902 10.31167033 10.76360744 10.36049092 14.31733231 10.75499428 10.93318540 3.49682023 12.02982610 1.71922726 9.45585693 7.09176752 7.82474749 10.38200889 13.05108997 -1.08804003 15.25348146 0.49682023 9.20871721 10.18914579 6.41965349 1.23376538 8.51698587 10.90231700 0.91188329 8.84111677 7.43933557 -1.08804003 4.15978255 9.13223674 9.14307959 9.06414320 10.68623367 9.70057670 10.73999489 4.08178273 12.75047145 15.11478571 6.54194378 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2.2122e-02 1.6384e-02 0.0000e+00 0.0000e+00 -2.5350e-03 -7.1437e-01 2.0861e-02 2.0861e-02 -6.8224e-03 -7.1304e-01 -7.1793e-01 -7.0749e-01 4.2265e-02 -6.8873e-01 -5.7311e-01 1.7502e-02 -6.7014e-01 1.8621e-02 3.3226e-02 -7.2820e-01 -6.8006e-01 -6.8426e-01 0.000 0.000 0.000 0.000 -0.714 0.000 0.000 0.000 -0.707 0.000 0.000 -0.433 0.256 0.000 0.000 0.000 0.000 -0.328 0.000 0.716 0.716 0.000 -0.684 0.000 0.000 0.000 0.000 -0.719 -0.265 0.000 0.000 0.000 0.000 0.000 0.000 -0.733 -0.733 0.000 0.000 -0.290 -0.290 0.000 0.000 0.000 0.000 -0.714 0.000 0.000 0.000 -0.707 0.000 0.000 -0.433 0.256 0.000 0.000 0.000 0.000 -0.328 0.000 0.716 0.716 0.000 -0.684 0.000 0.000 0.000 0.000 -0.719 -0.265 0.000 0.000 0.000 0.000 0.000 0.000 -0.733 -0.733 0.000 0.000 -0.290 -0.290 7.94252565 NA 4.95625185 10.82399928 11.65079507 6.87764242 10.46068032 8.23702875 9.09266281 NA 11.10753821 11.62218272 5.70627360 3.95625185 0.91188329 7.87186028 4.08178273 11.30417584 11.57630568 10.11642961 8.74632956 4.91185933 7.66005153 10.58560913 6.24277588 1.91184495 -0.08819339 NA 10.13102698 3.91185453 6.64656735 8.03597959 5.63977915 9.87324292 10.30899822 2.49682023 8.90903801 NA 7.92308558 12.35894163 7.51548460 8.10415107 -0.08819339 5.84259674 7.89199812 1.23376538 2.99931456 NA 4.15978255 2.91186412 1.71922726 11.17718044 0.49682023 5.97794845 10.60098285 10.20705338 7.23378646 9.19262916 13.70505526 7.04114111 3.99932358 3.66674523 10.82250112 5.40371083 NA 2.23379605 1.23376538 13.090972 5.541214 7.972554 12.029826 10.357908 10.292319 13.051090 11.018421 8.904797 9.933533 12.487043 11.809515 8.965784 8.844073 2.081783 8.852906 12.618354 11.2104938 11.7111400 7.1833218 13.0057670 9.1016829 5.3548012 9.8336994 7.2650055 11.1461130 6.2868978 8.2694105 10.7549943 7.2201974 3.6667452 10.1780593 6.0098913 8.0432783 11.0395304 10.6239555 10.5913385 8.0514096 10.0118636 11.7540123 5.6397791 10.1457357 9.0641432 10.5284072 10.4640472 11.4671665 9.3537650 10.7308400 10.8164930 9.2326588 5.0411422 9.2488557 7.2912370 10.4329681 6.7062736 11.2896112 7.5412151 10.9283185 10.4821885 6.9005432 14.4543764 10.2672095 10.2987986 11.9737358 10.4779124 NA 0.9118833 9.8292305 10.1188727 8.9439040 TCGA-AN-A0FF 32 0 NA 172 breast stage ia t1b n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 NA 2 2 1 1 3 8 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.040392e-07 23.5294117647059 5.88235294117647 0 29.4117647058824 41.1764705882353 10.1454269 9.7559493 12.3210192 9.2064757 8.0134455 9.4384669 10.2978988 10.2581243 9.2995851 13.8275371 8.5510565 11.2485527 2.6455864 12.2535640 3.5581207 9.3598266 6.1801697 8.0318241 10.0738181 13.3008487 3.7675701 14.9237230 4.9331571 9.7452847 10.6630445 9.7460888 2.6455864 9.9648546 10.9888321 0.1431322 7.3492812 7.4769811 NA 4.7078671 9.9838586 10.1719076 10.4075232 11.1638292 9.2358379 11.0404220 2.7280511 11.1897500 14.5243307 8.8073739 9.5721386 11.4636932 11.1374341 5.2446169 6.1127064 9.3774990 11.4290608 NA 10.9605974 5.7869361 7.5210138 4.2585566 10.5318156 11.8101922 10.7709186 11.7010230 12.7403573 9.3146745 10.8769434 10.7208242 11.7971199 11.4472419 5.2305450 11.9443849 10.1663730 -1.4418303 10.2659087 8.9568620 3.6472800 5.9843820 10.7324197 9.9557929 10.3569949 9.7875379 0.5580717 9.8078242 12.8497925 11.3664791 10.1093458 9.5545917 1.19190000 1.60850000 0.00000000 0.47512000 0.00903120 0.00291330 -0.00304750 -0.69505000 0.00833510 0.00833510 -0.00968060 0.00374650 0.00374650 -0.00507520 -0.00507520 -0.00507520 -0.00208030 0.45581000 -0.03640100 0.00458000 -0.00581400 -0.00539920 -0.00539920 -0.00539920 -0.01271300 -0.01271300 -0.01271300 -0.00304750 -0.01174900 -0.00097017 -0.00069303 0.00000000 0.00903120 0.00704350 0.00291330 0.00291330 -0.00304750 -0.69505000 -0.70523000 0.00136190 0.00360760 0.00833510 -0.00166290 -0.00166290 -0.00166290 -0.00166290 0.00374650 0.00138680 -0.00470790 -0.00507520 -0.00507520 -0.00507520 -0.48500000 0.45377000 0.45377000 -0.03640100 -0.00830050 -0.00830050 -0.00581400 0.03326700 -0.00539920 -0.00539920 -0.00180140 -0.01271300 -0.01271300 -0.00304750 -0.68092000 -0.68433000 -0.68433000 0.000 0.000 0.000 0.000 0.000 0.454 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.684 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.454 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.684 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1184511 NA 5.0499705 10.6356015 11.6493883 7.8028627 11.3482630 8.9501135 9.2093313 3.2585641 10.9380380 11.3712480 3.0816805 4.6874023 0.1431322 8.1165389 3.8435216 10.2650458 11.4953081 11.4754903 9.4650088 4.0499705 8.2654772 9.8452534 6.6718609 5.9156691 -0.4418303 NA 10.5425367 6.5860246 6.5749265 8.1838269 4.4650080 10.5456274 11.2055766 4.8800439 8.7833257 NA 7.5411121 11.5188442 8.4453390 7.8527392 NA 5.9068473 8.8618989 -1.4418303 4.7479405 -1.4418303 5.3910081 4.6027300 3.6455864 10.5777089 -1.4418303 7.3460208 10.1696041 9.9989874 5.1580300 10.1444889 13.3022162 8.8423639 3.3129991 2.4650080 12.5448491 2.2585491 NA 3.3129991 2.4650080 13.2472754 6.0419329 8.4114279 12.2535640 10.4454454 11.7162545 13.3008487 12.1310552 8.9973881 10.6518658 13.3014800 9.8446760 9.3774990 8.6835315 0.5580717 7.0499716 12.1724830 11.1435502 12.3935765 7.4160991 13.1789663 9.1783379 6.0338524 9.4415252 8.6561502 10.5482612 7.7205097 10.1654485 8.5510565 7.1691433 -1.4418303 11.2917691 7.5267848 8.4146527 10.3618458 10.2064757 10.9013039 10.0703648 9.5108595 12.5683840 6.6614062 11.5134939 10.4075232 10.7094519 10.0077828 9.2437431 9.8137369 10.4803309 10.9431717 9.3598266 -1.4418303 9.7524134 7.8418549 11.4290608 6.7280429 10.9605974 5.9068473 10.8541741 10.5318156 8.2288807 13.3716489 10.6682752 10.3929842 12.2273354 10.3217455 2.6455864 0.1431322 10.5560033 10.3553744 9.6004616 TCGA-AN-A0FJ 59 0 NA 242 breast stage iv t2 n2 m1 female 2010 NA no infiltrating ductal carcinoma 8 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.046104e-06 5.548757e-07 15.7894736842105 32.8947368421053 6.57894736842105 31.5789473684211 13.1578947368421 10.2207136 9.5397360 12.6334815 9.5490137 7.7106949 8.7554648 10.0101259 10.8008300 12.4158964 13.8483980 11.1910192 10.1347468 4.4335337 11.4285185 3.4335337 9.3510744 8.2692361 7.8258543 11.9772129 7.2804200 NA 6.7230438 7.1091014 9.0580275 10.9597097 5.8334670 5.0965022 7.3025302 11.1165312 NA 7.6814640 7.7910886 NA 3.8485779 9.2192615 10.5239432 9.0033923 7.8746365 9.1293448 10.9662172 6.7312172 7.8296657 15.8394906 7.3022560 9.8902333 11.3280175 10.1637236 2.5855395 0.8485578 8.9983213 8.9430918 0.8485578 12.0455860 4.4730660 4.8485729 6.3928944 9.2090554 12.0911528 9.2322784 11.8481044 12.6851505 7.3616438 11.4574449 11.0462495 11.3815793 11.7421284 4.8182012 12.2297565 4.9074676 0.8485578 10.0996620 9.8076101 8.4209838 3.3510770 8.1794911 10.5221776 10.0965016 9.5350747 0.2636354 3.5115439 13.7200944 10.4165302 10.0050785 10.0539601 0.1648200 0.0714600 -0.3753300 0.2388300 -0.6891100 0.8863500 0.1123500 0.6778000 0.0620050 0.0620050 3.6569000 0.0000000 0.0216710 0.9026000 -0.0087863 0.0462010 0.1598800 1.1587000 0.1190100 -0.7019500 0.8002400 0.0061758 -0.6936400 -0.4329500 -0.0311570 0.1016900 -0.0093383 -0.7655700 -0.1610900 -0.2460000 -0.0540860 -0.6912000 -0.8072900 -0.6937300 -0.6979800 -0.6900200 1.6783000 -0.6950900 -0.7328800 0.0209700 0.8008200 0.0547290 -0.7020400 -0.6850200 -0.7054500 -0.8043900 0.7785800 -0.1260900 -0.0991460 0.0187300 -0.7054500 -0.7443400 1.7242000 -0.1260900 -0.2356400 0.0922610 -0.7048200 -0.7329700 -0.8421500 0.3361700 -0.7654100 -0.5042700 0.3185900 -0.8276100 0.0620050 0.0674440 -0.2645000 0.6145100 0.0159330 0.000 0.000 0.000 0.000 0.102 0.000 0.000 -0.702 0.000 0.000 0.000 -0.729 -0.438 0.627 0.319 0.000 0.000 0.000 0.000 0.000 0.000 -0.300 0.000 0.000 0.000 -0.327 -0.327 -0.677 -0.677 0.886 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 -0.693 -0.693 -0.190 -0.190 0.000 0.000 0.000 0.000 0.102 0.000 0.000 -0.702 0.000 0.000 0.000 -0.729 -0.438 0.627 0.319 0.000 0.000 0.000 0.000 0.000 0.000 -0.300 0.000 0.000 0.000 -0.327 -0.327 -0.677 -0.677 0.886 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 -0.693 -0.693 -0.190 -0.190 6.6299336 NA 4.1215957 11.1565338 11.5767781 4.8996542 10.9342678 9.8175575 7.8004806 NA 10.6090168 9.9915320 2.0709732 NA 3.2636054 8.8984227 3.0709732 9.3270067 12.1671169 10.2915176 8.7106949 7.9289476 9.0628932 10.1028154 5.9915332 5.4133571 NA 1.8485578 10.8865786 3.7871712 8.0084454 8.5327381 6.5397358 9.6167142 10.6835718 2.9640474 9.5174592 1.5855395 8.2119788 14.2308379 6.4335370 11.5020163 NA 0.2636354 7.6982400 5.1705020 2.2636054 NA 4.9915309 1.6309645 2.5855395 11.6095712 10.7998588 10.3424295 9.9101703 10.0326230 3.5855395 8.8672380 11.6104023 6.8635247 3.1705020 3.5115439 10.7857026 2.5855395 -0.7364848 3.5115439 4.6211610 10.952115 8.983000 7.859801 11.428519 10.306639 10.859335 7.280420 11.984497 9.430239 10.849513 12.361479 12.583707 8.998321 7.771406 4.818201 7.647316 7.297035 10.781773 11.549881 7.779312 13.902158 8.889321 5.511538 10.184709 9.088570 10.136086 4.878323 7.211979 11.191019 10.113798 2.848578 9.883831 9.539736 10.203837 12.991000 10.691448 9.374747 7.601590 8.791089 9.292899 4.351077 11.181241 9.003392 9.926280 9.735287 11.527761 9.983856 10.831092 10.116921 8.710695 NA 8.501132 7.156853 8.943092 3.070973 12.045586 4.964052 10.626651 9.209055 7.525706 15.098255 10.628293 9.560528 13.955355 11.562247 NA NA 10.639194 9.155395 8.574225 TCGA-AN-A0FK 88 0 NA 213 breast stage iiib t4 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 2 NA 2 2 4 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 5.548757e-07 35.1351351351351 10.8108108108108 2.7027027027027 32.4324324324324 18.9189189189189 10.5326906 9.8824769 11.4084114 8.4054453 8.1961900 8.7340091 10.1828548 9.7872421 10.1763728 14.5085199 11.8960660 10.4046531 1.5741500 12.3310069 3.8220673 9.3406669 8.8173118 7.8756339 12.3856130 13.6233058 1.8960781 14.5702804 3.3814910 9.8245192 10.6256867 5.2034948 -1.4258500 10.4734948 10.5078285 0.1591125 9.1439936 6.7390447 NA 5.3814945 9.7945163 10.4305635 9.9078524 10.3113853 10.3505709 11.2952371 4.1287306 12.4932806 14.7410267 6.5809972 9.4258870 11.3231693 11.1763728 3.6616014 4.1591044 8.3206521 11.1045442 0.5741500 10.6741432 3.7034219 3.7034219 2.5741500 10.3697718 11.7545133 10.6476101 10.1050319 11.9918586 8.2483304 10.5871116 10.4491192 10.5699051 10.7719689 4.5965058 11.1906868 10.0654901 NA 10.0624802 8.7799311 2.4915709 4.5283338 11.7610259 10.0139688 9.9669919 10.1094133 -1.4258500 8.0639861 11.3227501 10.3923206 9.6307757 8.9491774 1.1072000 1.2370000 -0.0045695 -0.0045695 -0.4182700 0.3713400 0.3690400 0.3690400 0.3595300 0.3595300 0.3595300 -0.0033243 -0.0033243 0.3437200 0.3437200 0.3437200 0.3458300 0.3458300 -0.0013858 0.0020805 -0.3867400 -0.0097902 -0.0097902 -0.0097902 0.2827900 0.2827900 0.2827900 0.0000000 -0.3816800 -0.4042900 -0.3688400 -0.0045695 -0.4182700 -0.4182700 0.3713400 0.3664100 0.3690400 0.3690400 0.3644400 0.0000000 0.0000000 0.3595300 0.1986200 0.1986200 0.1986200 0.1986200 -0.0033243 -0.0033243 0.3437200 0.3437200 0.3437200 0.3437200 0.3458300 -0.3997500 -0.3997500 -0.0013858 0.0020805 0.0020805 -0.3893300 -0.3832500 -0.0097902 -0.0097902 -0.0052610 0.2827900 0.2827900 -0.0088158 -0.0103700 -0.3773000 -0.3773000 0.000 0.000 0.344 0.344 -0.054 -0.400 0.000 0.000 -0.387 0.694 -0.383 0.000 0.000 0.000 0.000 0.283 0.283 -0.371 0.866 0.000 0.000 0.000 -0.377 -0.369 -0.369 0.000 0.000 -0.418 -0.418 0.371 0.371 0.369 0.369 0.000 0.000 0.360 0.360 0.199 0.199 0.000 0.000 0.000 0.000 0.344 0.344 -0.054 -0.400 0.000 0.000 -0.387 0.694 -0.383 0.000 0.000 0.000 0.000 0.283 0.283 -0.371 0.866 0.000 0.000 0.000 -0.377 -0.369 -0.369 0.000 0.000 -0.418 -0.418 0.371 0.371 0.369 0.369 0.000 0.000 0.360 0.360 0.199 0.199 0.000 0.000 8.2883835 NA 7.1132963 10.0035446 11.2452366 6.6623437 12.1473117 7.8116348 9.5734192 NA 11.3951146 11.7612239 2.8960587 3.5741378 0.5741500 7.6020441 3.4321176 9.4885230 12.1493226 11.1435189 9.7130496 4.3290231 7.4227611 10.5567750 6.0417424 2.8220571 1.5741500 NA 11.1703277 5.9578426 5.1132963 8.4133419 4.2465601 10.3030745 10.9497204 0.8960781 8.8077577 NA 6.6721693 11.8129905 7.0170812 8.6813551 NA -0.4258500 8.4567811 2.9664489 4.2465601 -0.4258500 2.1591125 5.3156061 0.1591125 10.2066788 -0.4258500 5.2034948 10.4445027 9.2909574 4.2745748 10.3101170 11.5085660 6.5741378 3.0976951 2.5741500 13.1596873 4.9835272 NA 0.1591125 2.1591125 14.018284 5.128726 7.776262 12.331007 10.097210 11.979013 13.623306 11.129925 9.501279 10.809554 13.258119 10.473872 8.320652 10.357136 3.661601 7.045813 12.047970 10.8841826 12.3808889 6.8315251 14.8731815 8.7848092 3.7835929 8.6602741 8.5992776 10.4103500 5.5514176 8.2412496 11.8960660 5.2745785 5.2323499 10.0150071 9.8635805 6.7885539 9.6839685 10.3071532 10.8447252 8.2901000 9.6253468 12.4772666 5.2034948 10.6946253 9.9078524 10.6718409 10.4712270 10.6209209 9.6388806 9.8403388 11.0597157 9.3604075 0.8960781 9.4888819 11.8817571 11.1045442 6.1363801 10.6741432 6.0170823 10.1925234 10.3697718 6.9448257 13.0519594 10.0030214 10.7005197 12.6788186 10.2157382 -1.4258500 NA 9.7156065 10.0222542 8.9535164 TCGA-AN-A0FL 62 0 NA 231 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 5 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4.161568e-06 1.213791e-06 12.258064516129 25.1612903225806 3.87096774193548 31.6129032258064 27.0967741935484 9.0515652 8.4908192 10.5443087 6.9369229 8.8474245 9.0134972 10.9724143 10.0377233 12.1808483 13.4743309 9.0652756 10.5816464 NA 11.7232046 2.9691044 10.0763972 5.6231060 8.2545052 11.4338291 8.7990125 NA 11.5822967 7.6889951 9.3379947 10.6006012 8.3225096 0.4666532 7.1248141 10.1449094 -1.1184137 8.7930323 5.8241543 NA 4.0910905 9.7809972 9.0018782 8.4266048 9.0578133 9.6061540 10.4857301 -0.1184137 6.9849277 15.0742028 3.5848543 9.7734239 9.4871197 7.6498245 2.4666010 NA 8.5200761 9.6547794 NA 10.1571828 3.5254926 2.5820742 3.4052027 10.3889393 11.2167514 9.1331227 10.9631237 12.2368537 8.6809217 9.7042111 9.5155437 11.2479625 10.2734209 3.3410749 11.7947167 9.7089830 4.4052027 9.9150633 9.1531033 2.5842891 2.5820742 7.6825403 8.5663890 10.2819861 10.0377233 2.0515809 6.2303683 11.7359243 9.9816455 9.5864086 9.5191707 0.91743000 0.90452000 0.00083195 0.75375000 -0.01532900 0.02034300 0.62388000 -0.02109800 -0.87720000 -0.87720000 2.15180000 1.44710000 -0.01519100 0.65866000 0.03298600 0.03298600 -0.87557000 -0.87190000 -0.04495700 0.00166420 -0.87354000 -0.84659000 -0.84659000 -0.60177000 0.75108000 0.03397200 0.05722600 0.00763920 -0.85281000 0.21729000 -0.90320000 -0.85043000 0.00546600 -0.84891000 -0.90578000 -0.89794000 0.64885000 -0.02109800 -0.01519100 0.78176000 -0.01188700 0.04670000 -0.00830050 -0.00830050 -0.00830050 0.00055459 -0.01519100 0.75949000 0.05195600 0.03298600 0.38171000 0.41078000 -0.87557000 -0.86578000 -0.86727000 -0.02370300 0.00499690 0.77560000 0.82980000 0.03933700 -0.85480000 -0.60622000 -0.86452000 -0.77727000 0.77368000 -0.01807800 0.02412700 0.07325800 0.84081000 0.000 0.000 0.000 0.000 -0.859 -0.859 0.000 0.000 0.000 0.000 0.000 -0.855 -0.855 0.000 -0.871 0.000 0.000 0.230 0.887 0.000 0.000 0.000 0.735 -0.859 -0.859 -0.831 0.754 0.000 0.000 -0.892 -0.892 0.000 0.000 0.000 0.741 0.000 0.750 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 -0.859 0.000 0.000 0.000 0.000 0.000 -0.855 -0.855 0.000 -0.871 0.000 0.000 0.230 0.887 0.000 0.000 0.000 0.735 -0.859 -0.859 -0.831 0.754 0.000 0.000 -0.892 -0.892 0.000 0.000 0.000 0.741 0.000 0.750 0.000 0.000 0.000 0.000 9.0553174 NA 7.3654563 10.4347896 10.8038530 6.4793211 11.5685784 9.0420790 8.8815698 -1.1184137 12.5936298 12.3400777 5.5109967 NA -0.1184137 6.5540654 0.8816646 8.2058206 12.1184019 10.5398518 9.3266551 3.3410749 6.4438834 10.6193101 5.4963505 13.9610000 NA -1.1184137 11.6260537 5.2391918 3.5820742 8.5362764 9.2248260 8.5766771 10.2750307 -0.1184137 9.3694802 2.8816450 5.8241543 13.3842856 6.0415124 11.1354877 -1.1184137 -1.1184137 8.1922529 2.5820742 3.4052027 NA 2.2035771 2.7885396 2.6889860 12.0935286 2.8816450 6.5540654 11.0540678 9.0134972 4.3734951 9.6760561 13.1257811 7.1990529 1.2035771 1.2035771 8.9164393 3.9691044 4.9901652 0.4666532 9.0540678 11.004769 6.307906 8.367470 11.723205 9.582947 11.428052 8.799012 8.552296 8.742929 8.919187 12.591263 10.532692 8.520076 6.051566 2.341075 6.365456 10.653542 10.5920162 13.1416042 5.6231060 16.2805666 9.4571795 7.1624115 8.5751274 4.6629973 10.1362379 3.9260374 3.6889972 9.0652756 7.5540654 8.2259362 10.2114366 10.1092562 7.0460446 11.7825071 10.2862497 10.9534378 7.5073491 9.6044478 7.7703838 2.4666010 9.9473997 8.4266048 10.9355661 10.6958221 11.1449095 11.0609274 10.2485089 10.4912807 8.6695427 NA 9.7633737 6.4666027 9.6547794 2.6889860 10.1571828 5.4362285 10.5250455 10.3889393 7.2653450 14.3469197 9.8963581 11.7755106 9.2125572 10.0689924 -0.1184137 6.2214905 10.0831517 9.7018192 8.6597173 TCGA-AN-A0FN 61 0 NA 218 breast stage ia t1c n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 3 NA NA NA 4 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 6.935946e-08 27.2727272727273 0 9.09090909090909 54.5454545454545 9.09090909090909 10.58501885 10.02345664 11.21405557 8.91628973 8.46764060 9.47586088 9.20543015 10.76098285 10.49654634 7.99942281 11.08610284 10.67166189 1.75339060 11.94062325 2.89089412 10.46454565 7.03879721 8.70526225 8.32476831 12.13363949 0.01649632 12.40597104 5.57101841 9.76853122 9.08699760 5.48674976 NA 10.09369010 10.30529535 3.71687021 8.48403499 7.94716643 11.31487379 6.57101841 9.58691746 10.69708189 10.01595955 10.98821233 9.75395830 10.95967671 0.01649632 9.82807157 15.54182777 8.56736861 9.54716079 11.17903046 11.15683306 5.15938699 4.31410918 8.86191940 11.50108440 1.43146250 11.56235907 6.65546919 7.73296311 5.52949927 10.60919776 11.51361584 10.50292914 12.85792814 12.74774833 8.52025487 11.29371671 10.61623684 11.43340272 10.69854607 4.31410918 11.81152197 9.64213818 0.43146250 10.59919857 9.14485322 3.07992419 6.50292884 10.88190485 10.12277417 9.79121630 9.88782118 2.60138750 8.28633504 13.91691880 13.01148979 9.43498469 10.00558722 2.3917e-01 2.3917e-01 1.3402e-03 -7.3216e-03 -1.0612e-03 -1.1553e-03 -2.8172e-03 -2.8172e-03 -4.1946e-03 -4.1946e-03 5.9233e-03 6.4669e-04 0.0000e+00 1.2015e-03 -4.6557e-05 7.8537e-04 -6.2750e-03 -1.9864e-03 -1.0167e-03 2.4503e-03 4.3944e-03 5.0892e-03 5.0892e-03 5.0892e-03 2.1727e-03 2.1727e-03 2.1727e-03 5.6452e-03 -1.6018e-01 -1.6018e-01 -2.9556e-03 1.3402e-03 5.3672e-03 -1.0612e-03 -1.1553e-03 -1.1553e-03 -2.8172e-03 -2.8172e-03 -2.8172e-03 5.0802e-04 5.0802e-04 -4.1946e-03 5.2282e-03 5.2282e-03 5.2282e-03 5.2282e-03 0.0000e+00 0.0000e+00 1.2015e-03 -4.6557e-05 7.8537e-04 7.8537e-04 -6.2750e-03 -1.9864e-03 -1.9864e-03 -1.0167e-03 2.4503e-03 -1.0554e-02 4.3944e-03 -1.7111e-01 5.0892e-03 5.0892e-03 7.8537e-04 2.1727e-03 2.1727e-03 5.6452e-03 -5.7101e-03 7.0359e-03 7.0359e-03 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 -0.171 0.000 0.000 0.000 0.000 0.000 0.000 -0.160 0.079 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 -0.171 0.000 0.000 0.000 0.000 0.000 0.000 -0.160 0.079 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.67225808 NA 7.04985182 9.94667385 10.89754328 6.83694915 10.02158605 10.35393976 9.04249168 4.62128999 12.48700346 11.67064018 2.82379011 4.15938699 3.75339060 8.42582013 4.66028405 12.00333793 11.42582024 10.37178046 9.11094704 2.51893793 8.17124737 9.89805307 8.34883879 6.86191940 2.82379011 NA 11.56091085 7.02392397 7.88884795 7.92131493 5.97836040 9.82366084 10.16363421 6.45937260 8.06082345 NA 8.45244677 12.60256540 7.89703345 9.08699760 0.01649632 3.51892534 8.23559783 -1.56832356 5.65063533 -1.56832356 8.16617664 4.69825182 5.18635397 10.20543015 NA 9.39869304 9.97691405 9.94074700 7.17965933 10.73923684 12.71701352 9.39797234 2.67940128 5.65063533 10.48878170 3.89089412 NA NA 1.75339060 12.553471 5.978360 8.462134 11.940623 10.487088 10.501252 12.133639 11.067412 9.185294 10.518598 13.661262 10.095025 8.861919 8.932309 -1.568324 7.437091 11.052832 11.170192 11.770899 6.038796 13.544839 8.996569 8.579943 8.661487 7.744349 9.911999 8.452447 7.578672 11.086103 7.169559 3.475863 10.779088 5.669871 6.307984 11.663738 10.986775 10.878292 8.022054 9.115339 10.762384 7.933304 11.643763 10.015960 10.696789 9.289448 10.805691 10.349957 10.671065 10.418020 9.075323 -1.568324 9.779171 8.672151 11.501084 8.595116 11.562359 9.291002 10.795875 10.609198 6.943219 14.024417 10.059001 10.701178 12.718818 10.378008 4.890899 -1.568324 10.150000 10.120154 9.050770 TCGA-AN-A0FS 55 0 NA 210 breast stage ia t1c n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 3 NA 4 3 3 4 3 4 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 4.508365e-07 22.5 30 0 32.5 15 10.1724260 10.0213724 12.0229534 9.4295386 8.6989168 8.8788685 10.3799529 9.7267791 9.8605148 12.1322995 11.7566496 10.5712265 3.4108702 13.0629942 3.1884801 9.1593872 6.8671799 8.5033801 9.3667322 13.5667471 1.4779881 14.4158476 6.1984667 9.6945144 10.7200805 6.7701009 NA 7.8624787 8.2485780 1.8259077 7.9418851 8.0588473 0.3405053 5.2853430 9.8788685 10.2114666 10.3410490 11.7965318 10.2903122 11.0707858 4.7867427 11.3940041 14.4758581 8.1691042 9.6346466 11.3173360 11.2949727 5.2182309 7.1984667 9.2377260 11.0033318 -1.9816507 11.2816798 8.9901008 4.1478439 4.4279480 10.3291701 11.6981474 10.4728567 12.2166954 12.6378030 9.1536252 11.1234837 11.0922672 11.7341977 11.3327158 4.9610723 11.7760516 12.9170643 -0.3964983 10.0836369 8.9901008 3.4197816 3.9727570 10.2655948 9.8605148 9.9507721 9.8387364 4.4615024 8.6479138 13.3599372 12.8592370 10.2664849 9.7879820 1.04620000 1.62710000 -0.01009400 -0.01422800 -0.00456950 0.04783600 -0.00258290 -0.00646040 -0.63632000 -0.63632000 0.00097064 0.00300220 0.00861350 0.02370600 3.21080000 0.00736090 -0.00207840 -0.01913900 -0.20242000 0.00500990 0.00110930 -0.01409000 -0.01959400 -0.01959400 -0.03204100 -0.03204100 -0.03980100 0.01698500 -0.01684100 -0.00622860 0.00972870 -0.01009400 0.00819590 -0.00277070 0.00000000 0.00000000 0.00393190 -0.00646040 -0.00304750 0.00013863 -0.00483600 -0.63632000 0.00254960 0.00254960 0.00254960 -0.03289400 0.00861350 0.00861350 0.02370600 -0.01326400 -0.63916000 -0.62083000 -0.00207840 -0.00747200 -0.00747200 -0.20124000 -0.00373950 -0.00432510 0.02258500 -0.63169000 -0.01409000 -0.01959400 0.01398100 -0.03204100 -0.03204100 0.01386700 0.00360760 0.00235810 0.03087300 0.000 0.000 -0.640 -0.640 0.000 0.000 -0.202 0.000 0.000 0.000 -0.632 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.046 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 -0.640 0.000 0.000 -0.202 0.000 0.000 0.000 -0.632 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.046 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.636 0.000 0.000 0.000 0.000 0.000 8.7422185 NA 6.5184029 10.4218357 11.0785777 6.4412942 11.5705059 9.2984524 8.5942951 4.8765366 11.3264697 11.2319548 2.9254488 5.0738417 3.5104050 8.2521772 3.3761098 9.4060362 13.3137523 10.7771970 9.4723424 3.3039561 7.3892450 10.2243506 5.7189972 7.2664849 NA NA 10.9723901 7.3494741 7.8145972 9.6900984 6.7566497 10.0156664 11.0097249 4.7050600 8.3268964 -0.9813658 8.5144123 13.0752798 8.0993752 7.7033063 -1.9816507 2.1060132 9.1329505 4.6909813 4.8129756 -0.3964983 3.5104050 5.6490779 2.1884959 10.2652980 0.3405053 8.8765384 10.2691519 9.9201785 4.8514492 10.1581088 11.7408313 8.0029759 2.0185630 3.1060132 11.2188430 0.3405053 NA 1.0185630 1.1884642 15.082588 4.588415 8.039537 13.062994 10.084505 11.293227 13.566747 12.651098 9.036062 10.689435 13.311670 10.169574 9.237726 11.830133 -1.981651 7.717262 11.742112 11.2240452 11.7843615 8.4300682 14.2704087 9.0967083 5.3314401 9.0643170 8.3337068 10.5610427 5.5731473 6.3177653 11.7566496 5.6332684 1.0185630 10.7289334 9.1368497 5.7617081 10.8656147 9.9983398 10.2572607 7.8780920 8.4861629 12.2163884 5.6909841 11.4103984 10.3410490 10.3603542 9.9418848 11.6396935 9.4453462 10.2821201 10.7083370 8.6497344 1.0185630 8.7436170 7.7861461 11.0033318 4.7328010 11.2816798 6.4779897 10.5852941 10.3291701 7.4045277 14.3931215 10.1000408 10.2870994 12.4898515 10.1708422 -0.9813658 3.4012209 10.2744711 10.3390759 9.8609077 TCGA-AN-A0FT 63 0 NA 214 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic 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10.680780 8.613763 12.138554 10.533420 6.625034 13.806877 10.401179 9.542736 11.788395 9.988461 -1.380446 4.090269 10.717441 10.514227 9.997704 TCGA-AN-A0FW 67 0 NA 11 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 1 2 1 NA 2 2 1 4 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 2.150143e-06 6.242351e-07 8.53658536585366 15.8536585365854 1.21951219512195 48.780487804878 25.609756097561 9.4542935 9.6899129 12.1415972 7.3107473 10.0505445 9.1030423 10.4635651 10.2832054 8.9711742 14.4605145 11.0388283 11.2110093 0.3192711 11.5540430 4.1265765 8.4106608 5.3960396 8.2110093 10.0347587 13.1812817 NA 13.2766904 1.9041950 9.0964809 11.0898894 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11.44317719 9.87668929 4.34159443 -0.68084454 8.29936510 2.84277775 8.70293003 12.06982788 11.59985135 9.49539877 1.77867117 7.69426525 9.54684161 6.19574326 8.01271280 2.84277775 NA 9.82255442 7.41725760 5.08741192 6.85060692 4.42774695 10.12556974 10.78326069 3.56715600 8.35951546 NA 6.30791116 12.94487735 6.84278780 7.79090103 -0.68084454 3.27342637 8.68773190 1.77867117 4.27341891 0.31927109 5.20186906 3.67677515 1.77867117 11.20244160 -0.09588204 8.07578183 10.80480332 10.36907415 4.40668632 8.71475964 11.46021505 8.83591050 1.77867117 3.52868383 11.77043669 0.64117606 NA 0.31927109 1.90419505 14.05008494 5.73707830 8.11038830 11.55404299 10.49446321 10.76760001 13.18128170 14.40166572 8.58601221 10.99054550 14.03733028 10.65321949 9.21707097 9.37450810 -0.09588204 9.09976543 11.77699121 11.131403 13.173802 6.562400 13.141743 8.768374 5.319224 9.826525 7.550447 10.603231 5.676778 10.350927 11.038828 6.698603 6.599996 11.119923 4.319228 7.569951 9.749678 10.363620 10.857415 8.640579 9.802538 11.816204 5.226115 11.313247 9.848656 11.476257 9.978776 11.090509 9.460055 10.892873 10.744179 9.041179 NA 8.876890 5.962072 11.587183 4.991649 10.833693 6.645656 10.608838 11.000684 8.103861 14.032048 10.594186 9.963983 11.889793 10.921461 1.319213 5.948582 10.355399 10.028309 9.341593 TCGA-AN-A0FX 52 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 3 4 NA 5 1 5 5 2 7 NA NA 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.788144e-06 3.632167e-07 18.2926829268293 15.8536585365854 4.8780487804878 39.0243902439024 21.9512195121951 10.12961171 9.74116594 11.54736813 9.57915054 8.04850213 8.88486437 10.07690082 10.77937120 11.72126819 12.52443079 10.90468384 10.83836959 0.93651545 12.24833995 3.43899806 10.61245405 6.29404907 9.22574753 10.81070995 7.54135918 1.81097772 9.87852274 9.93602731 9.05886790 11.57115686 7.70908657 NA 10.27931249 10.32881448 3.25842847 8.12632142 8.14106845 0.35151526 4.70908657 10.27114282 10.32738254 9.08709045 10.15566563 9.25013590 11.08539730 5.44956798 7.56585380 15.84627297 8.13010460 9.83735387 10.79006653 10.63520170 6.64155325 3.93649661 9.57854875 10.71457421 NA 10.20250270 4.93649661 6.63693632 4.65531748 8.83030413 12.07988027 10.14269742 12.45899685 13.05916330 7.57070275 11.05954071 11.18161792 10.75401369 11.35540379 4.87509688 11.97621579 10.45678829 -0.06355993 10.40952629 9.69749410 6.65622748 3.77779842 11.51502702 11.58425526 10.48049547 9.67684002 3.25842847 9.52271138 12.75601091 12.13371375 10.17450367 9.98725264 1.23910000 0.61244000 0.36510000 0.68663000 -0.38940000 0.89227000 0.38700000 0.00708260 1.03750000 0.32093000 2.94440000 0.00000000 0.00000000 -0.03735400 -0.05765400 0.33869000 0.01405100 0.01690300 1.68690000 -0.37110000 -0.31471000 -0.36068000 -0.36068000 0.04202400 0.26216000 0.93488000 0.26043000 -0.01684100 0.03651200 0.00041593 0.31726000 -0.39319000 -0.39908000 -0.07080400 -0.41420000 -0.43057000 -0.79017000 -0.39196000 -0.40550000 -0.05873100 -0.02864300 -0.37988000 0.41396000 0.41396000 0.41396000 0.30473000 -0.40440000 -0.02644100 0.20595000 -0.05765400 -0.76052000 -0.05293600 0.45632000 0.38436000 0.00513590 -1.05090000 -0.37110000 -0.38515000 -0.36658000 0.02721600 -0.36306000 0.04202400 -0.01670400 0.26216000 0.26043000 0.71133000 -0.04522800 0.29979000 0.33335000 0.000 0.000 0.000 0.000 0.439 0.000 -0.379 -0.371 -0.315 0.000 0.000 -0.361 -0.361 0.000 0.000 0.262 0.935 0.000 0.576 0.000 0.000 0.000 0.333 0.338 -0.046 0.687 0.687 -0.389 -0.389 0.294 0.294 -0.392 -0.392 0.000 0.000 -0.058 0.483 0.414 0.305 0.139 0.139 0.000 0.000 0.000 0.000 0.439 0.000 -0.379 -0.371 -0.315 0.000 0.000 -0.361 -0.361 0.000 0.000 0.262 0.935 0.000 0.576 0.000 0.000 0.000 0.333 0.338 -0.046 0.687 0.687 -0.389 -0.389 0.294 0.294 -0.392 -0.392 0.000 0.000 -0.058 0.483 0.414 0.305 0.139 0.139 7.46266995 -0.64837167 6.61832089 10.72249437 11.21397820 6.60779042 11.29917149 9.03163036 8.67897507 1.15891864 11.22709195 10.89837117 5.10642370 -0.64837167 4.07945492 9.31876084 3.43899806 9.05543809 11.08094288 11.01687046 9.24331825 1.15891864 8.11971878 9.77307342 5.75241410 6.59470828 0.67346597 -1.64837167 10.82498666 5.87509688 6.88291567 7.91186712 9.85883361 11.35025893 11.12817320 3.59946063 10.23913593 -0.64837167 7.68692487 13.09415978 7.39865820 8.00974578 -1.64837167 3.59946063 7.90804069 5.54135996 6.90995547 -0.06355993 4.59946063 3.70908105 3.93649661 10.54382740 3.05198107 9.83585398 10.70330198 10.13125391 5.40681555 8.97083755 11.76251584 8.01331262 2.74385961 3.70908105 10.38942463 3.15888634 4.92138872 3.15888634 5.14595048 11.0658874 9.5609879 7.6018332 12.2483399 11.1329844 10.9540015 7.5413592 11.7968081 9.5047129 11.0184243 12.7209956 11.8866884 9.5785487 8.1394373 0.3515153 8.1491958 10.2782012 11.894566 11.493961 5.093002 14.401787 8.410879 9.225748 9.651315 7.264424 10.790721 5.743852 5.980891 10.904684 9.322359 5.980891 10.492684 9.987253 9.109583 13.597050 10.607153 9.704681 7.266219 10.106005 9.498103 6.058894 11.484595 9.087090 10.285594 9.794478 11.617296 11.003483 10.717310 11.061265 8.065780 7.252401 9.053387 7.842465 10.714574 6.246353 10.202503 6.902281 11.072967 8.830304 7.829495 14.782493 9.959327 9.307911 12.932146 11.819395 2.158886 NA 10.761721 9.382891 10.296247 TCGA-AN-A0FY 55 0 NA 10 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 4 NA 2 2 1 1 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.24847e-06 1.387189e-07 36.5853658536585 12.1951219512195 4.8780487804878 26.8292682926829 19.5121951219512 8.9850894 9.6342046 12.0909389 9.0568802 8.2465734 8.4170727 10.9999279 10.8613888 9.8727403 14.3040314 11.4183644 11.1025916 0.4443490 11.9644095 2.7074144 9.8198540 5.5981865 8.4101643 8.0142359 12.9935872 2.9804275 13.8152855 3.5818815 9.6674166 10.9636232 4.5818815 1.1224739 8.4147736 10.0979418 2.1224408 7.7353204 6.5941275 1.4444020 3.0293469 9.6674166 10.0766483 8.9249683 10.9476096 10.1743407 10.7902289 6.2973785 11.7395751 14.8828991 7.3161249 9.7599825 11.0864318 10.5289228 3.2099212 -0.8775261 9.1434319 10.2171895 NA 10.4731151 4.5818815 5.3798393 5.3319058 8.6072748 12.1723857 10.2955045 12.0219034 12.7257307 6.7149090 11.7420989 11.0867659 11.2327722 12.0250156 4.9168683 11.5455679 12.5714717 0.4443490 10.4055404 9.9119857 3.5624134 4.1885434 11.9104566 10.9121894 10.7799938 10.6087843 4.7806618 7.7390008 12.2031030 11.5937462 10.3810181 9.8580080 0.343230 0.343230 -0.054825 -0.056038 0.389820 0.672150 0.371170 0.371170 0.421500 0.421500 1.179900 0.000000 -0.011198 1.734700 0.526780 0.526780 0.354470 0.354470 0.765610 0.806550 -0.534620 -0.507430 -0.508350 0.339180 -0.492870 1.843400 1.239300 3.656900 0.353230 0.343230 -0.049019 -0.058953 0.320440 -0.130180 -0.153240 -0.153240 0.371170 0.371170 0.371170 -0.345150 -0.346890 -1.078500 0.725670 1.754400 -0.494540 -0.041431 -0.011198 -0.066493 0.767530 0.526780 0.694090 0.928780 0.354470 -0.098023 -0.061958 -0.538960 -0.041567 -0.539560 -0.519180 0.387330 -0.547030 -0.508350 0.810310 -0.469610 0.202740 -0.110510 -0.485960 -0.516740 -0.519690 0.000 0.000 0.338 0.338 0.354 0.000 -0.504 0.000 -0.519 0.390 0.390 -0.508 -0.508 0.178 0.810 0.000 0.203 0.343 0.343 0.000 0.000 0.000 -0.517 0.000 0.000 0.000 0.000 0.320 0.190 0.519 -0.153 0.371 0.371 0.152 0.152 0.156 1.148 0.000 0.000 0.144 0.144 0.000 0.000 0.338 0.338 0.354 0.000 -0.504 0.000 -0.519 0.390 0.390 -0.508 -0.508 0.178 0.810 0.000 0.203 0.343 0.343 0.000 0.000 0.000 -0.517 0.000 0.000 0.000 0.000 0.320 0.190 0.519 -0.153 0.371 0.371 0.152 0.152 0.156 1.148 0.000 0.000 0.144 0.144 7.7518085 NA 4.9426318 10.4087210 11.5517280 6.7546110 10.0986581 7.6045947 7.9323488 NA 11.7404933 12.5551551 7.4800041 -0.8775261 -0.8775261 8.8469659 4.7223622 9.4667480 11.5488479 10.3294664 10.1104265 3.9298099 9.1054455 9.7022394 5.3221228 6.3319058 -0.8775261 NA 11.5261299 6.6262785 5.9928160 8.8529221 8.2861017 11.2633521 10.6652421 2.4443755 10.5010179 NA 6.1723015 12.0876952 9.2019369 7.0678957 -1.8777911 6.4216592 7.6770409 3.6770459 3.0766446 1.2923695 4.6923100 5.2744331 1.1224739 11.5470120 3.8503694 5.7223649 10.8298112 9.6736797 3.9553407 10.4090098 11.5476680 9.8163746 3.5147661 3.9804367 10.7177095 5.5818845 -1.8777911 NA 1.5818815 12.805432 7.963230 7.751808 11.964409 10.392455 10.532108 12.993587 12.035061 9.942132 11.048007 12.426447 11.951679 9.143432 8.489867 5.488775 8.135077 12.386015 11.1959242 11.6844559 7.5841771 13.7665590 9.1790898 8.1420427 9.9577130 8.5920937 10.8500790 6.0997328 9.7060050 11.4183644 9.5570803 0.1224739 10.3930393 6.1054455 9.7822919 11.9420324 9.9418329 9.6072750 9.0353413 10.8552554 9.6533460 4.0050945 12.7139715 8.9249683 10.3060874 10.0300938 11.5822678 9.3017392 11.0151846 10.5648772 9.3578680 0.1224739 9.6250502 6.8266667 10.2171895 2.2923695 10.4731151 8.2543092 10.4502853 8.6072748 8.2633711 14.1782005 10.4353350 10.5241316 11.8987823 11.0125263 0.7074364 1.1224739 10.5788065 9.3085663 10.2102464 TCGA-AN-A0FZ 45 0 NA 10 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 2 1 NA 2 2 1 1 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.144431e-06 2.774378e-07 41.4634146341463 12.1951219512195 0 31.7073170731707 14.6341463414634 9.758677109 9.855892240 11.942271763 9.716154280 9.002872666 8.992220066 10.612157385 10.318418757 9.160877341 15.145256472 10.661175246 10.806685508 -0.990796173 13.653674419 3.053615323 7.772439289 3.764112567 8.625775315 11.582755491 12.697094343 2.653082953 14.231549853 0.331131922 9.002872666 11.648454253 4.963423259 -1.990796173 8.685183642 9.502081328 0.009203827 8.850004575 7.056350502 -0.405833672 4.501082408 9.978972808 9.619790069 9.077333004 9.977173292 10.333407185 11.224759614 2.764112567 10.746051291 14.209512225 9.434437246 9.235638755 10.746473928 11.505331386 3.179144757 6.169097218 9.350745410 9.554673838 -0.990796173 10.414368125 6.271321086 3.816579228 3.257161520 10.470194371 11.991061435 10.136898602 12.696547628 12.956635267 8.582873966 10.520237971 10.023100627 11.709666332 11.144294592 4.638583615 12.432079814 10.707714240 NA 10.311579972 10.057372828 2.180752571 3.468661510 10.241047775 10.674784587 10.779064495 11.161828366 0.331131922 3.867204595 11.897399082 9.828208220 9.858631771 9.545959491 0.451900 0.451900 0.239690 0.137610 0.075258 -0.612580 -0.068797 -0.120950 0.930400 0.808110 1.984900 1.287500 -0.607290 -0.630930 -0.586180 3.656900 0.177840 3.656900 0.440130 1.672100 -0.183700 -0.838570 0.488200 0.488200 -0.312950 -0.328090 -0.328090 3.432400 0.028481 0.092025 -0.135100 -0.577430 0.108910 0.052851 -0.647800 -0.653610 -0.068797 -0.111420 -0.120950 -0.383920 -0.299920 -0.938870 -0.206850 -0.206850 -0.206850 -0.206850 -0.607290 -0.607290 -0.359090 -0.575370 -0.627280 -0.611620 0.177840 -0.410640 -0.368500 0.458200 0.052810 0.052810 -0.183700 -0.473530 -0.838570 0.488200 -0.614790 -0.312950 -0.328090 0.245750 -0.385820 -0.836560 -0.552560 1.087 0.480 -0.612 -0.612 0.178 0.178 0.440 0.444 -0.184 1.281 0.000 -0.839 0.488 -0.615 -0.615 -0.328 -0.328 0.000 0.344 0.514 1.044 0.130 -0.579 -0.155 -0.155 0.138 0.138 0.000 0.000 -0.648 -0.648 0.000 0.000 -0.835 -0.835 -0.131 1.985 -0.207 -0.207 0.000 0.000 1.087 0.480 -0.612 -0.612 0.178 0.178 0.440 0.444 -0.184 1.281 0.000 -0.839 0.488 -0.615 -0.615 -0.328 -0.328 0.000 0.344 0.514 1.044 0.130 -0.579 -0.155 -0.155 0.138 0.138 0.000 0.000 -0.648 -0.648 0.000 0.000 -0.835 -0.835 -0.131 1.985 -0.207 -0.207 0.000 0.000 8.007817238 -0.405833672 5.645851499 10.383451043 12.545048732 6.765148827 11.078844229 8.642457902 9.218095056 NA 12.381071322 11.674451471 2.594190220 -0.405833672 2.963418635 6.957594274 3.331160592 10.359337115 11.253887776 10.832195708 9.230813760 -0.990796173 8.266614625 10.335656090 5.660278341 4.384263984 3.501082408 NA 10.605416364 3.294635451 7.422854457 8.874959838 7.692221431 10.930329305 10.258043625 1.816599707 8.064508897 NA 6.375548630 11.562015793 8.109889144 7.693975440 NA 7.577182567 7.853147965 -0.990796173 4.975011048 1.179128829 2.257161520 3.233029057 0.009203827 11.028817343 NA 7.486984612 10.654434735 9.388063365 4.418615001 8.152609856 11.538046984 7.107258930 4.384263984 2.709665599 11.146377874 4.349075067 -0.990796173 4.009230706 2.709665599 12.738210 5.764115 8.590427 13.653674 10.419227 9.997556 12.697094 13.628702 11.496871 10.843105 12.266099 10.059756 9.350745 8.409039 1.709688 7.759096 13.437914 10.757000 12.596946 6.384266 12.767292 9.689146 2.468662 8.606348 8.751536 10.620238 5.117749 8.693098 10.661175 5.891869 4.349075 10.493798 8.623016 8.286421 10.501831 9.687387 11.051228 7.414368 8.975732 11.340144 2.179161 11.215878 9.077333 10.288547 9.392931 12.197584 10.104624 10.807091 10.409039 9.480902 2.532791 8.959673 5.816582 9.554674 2.009240 10.414368 7.456310 10.533381 10.470194 7.715032 13.366263 10.278646 9.895304 12.139636 9.744360 NA 1.331132 10.884208 10.702496 9.881517 TCGA-AN-A0G0 56 0 NA 16 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 NA NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 8.669932e-07 1.387189e-07 27.5862068965517 20.6896551724138 6.89655172413793 24.1379310344828 20.6896551724138 10.1709025 9.4528866 12.2681499 9.7960179 8.2476883 9.1044693 8.8200752 10.6276973 11.3027928 13.3726321 10.3763749 10.7125481 NA 12.5567600 4.2067682 10.9249339 6.1243054 9.5321270 7.6661999 10.3664792 NA 9.6878948 3.5148923 8.7362917 10.8446579 2.4774183 -1.7705351 7.9471302 10.3610235 0.8144274 8.7598945 8.9316606 NA 5.0874671 8.3906200 9.7183323 9.1423774 9.8186710 10.0038633 11.7867124 9.6404693 8.9935303 15.6977700 7.6449976 9.5183542 11.2236647 11.6835303 3.9019095 -1.7705351 9.0239040 11.0506641 -1.7705351 11.1874970 3.3994172 5.2518554 5.7052204 9.8583892 11.9256949 9.0781110 11.4120376 12.8272497 8.4821533 11.2854483 11.0355120 11.1468601 11.5740614 4.9159893 11.4663992 5.6473404 -1.7705351 9.6309009 10.0800656 3.0904470 3.7530482 8.7273399 9.6325002 9.9142367 9.9484490 -1.7705351 3.4389448 12.6624214 10.4186949 10.1945508 9.9620795 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.8275409 -1.7705351 3.7213398 10.9881277 12.0436700 5.2715863 10.8602102 8.7770574 8.0370203 NA 11.0494675 11.0147239 1.0368198 NA 3.6218057 8.7859941 2.4774183 10.0588143 11.8150375 11.5678066 9.1273335 NA 7.9843757 10.2915341 5.5958110 11.1318632 NA 2.2294956 11.9562384 7.0368429 5.3275185 9.7730033 9.2089132 9.2293259 11.5570407 NA 9.1013932 1.6889412 8.6034409 13.1652517 7.6848152 6.4291607 NA -0.1855726 8.9734810 2.1363883 2.7530482 NA 4.0368462 0.8144274 -0.1855726 12.1426580 2.4774183 9.3709565 10.6947993 9.6468132 4.1836850 8.6185815 12.2975945 12.9943597 5.0874671 2.1363883 10.7117919 2.6218057 7.1572661 -0.1855726 5.7763830 12.260069 7.356192 8.795542 12.556760 9.190279 11.447900 10.366479 11.476822 13.139519 10.730330 12.758308 10.733065 9.023904 8.431612 1.229465 7.409397 11.396122 10.846726 13.047271 5.399414 15.618673 8.502118 4.295576 9.166126 9.771553 9.398248 5.638879 3.621806 10.376375 1.814468 5.894825 10.654704 10.058814 9.649206 13.977681 9.587590 10.812336 9.134123 8.971798 9.214619 6.887700 10.011290 9.142377 9.618582 10.313964 12.001390 10.247688 10.775900 10.285787 10.465203 NA 10.368294 8.666335 11.050664 7.139381 11.187497 6.912482 10.050864 9.858389 8.598158 13.641462 10.199953 10.794590 12.802425 11.852684 1.399390 NA 10.420856 11.025325 9.645758 TCGA-AN-A0XL 61 0 NA 163 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 1 1 NA NA 6 4 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.733986e-07 20.8333333333333 20.8333333333333 4.16666666666667 29.1666666666667 25 10.413052 9.972847 11.882350 9.251912 9.085967 9.243919 10.178796 9.450192 9.503982 12.975263 11.255450 10.480364 2.974456 13.395220 3.582146 9.243028 5.536336 9.009454 9.190396 12.721772 1.167101 12.631734 3.389498 9.054527 10.909974 6.885922 NA 8.815760 9.292086 3.904070 7.279108 7.282581 -1.417733 4.752063 9.997354 10.316427 9.045665 11.529960 10.289931 11.439344 5.151997 11.317697 14.753513 9.042197 10.479986 10.962061 11.079743 5.415032 0.167101 9.675558 11.676053 NA 11.488468 6.337028 4.791595 4.363501 10.114009 11.943536 9.913618 12.151522 12.787858 8.134810 10.946823 10.788731 11.374728 11.119844 5.008406 12.384152 9.417402 -1.417733 10.107662 9.706908 3.139191 4.690663 9.794637 9.836579 10.269954 10.723609 4.167101 9.680831 13.028578 12.549277 9.848342 9.567271 0.78273000 0.51125000 -0.00373950 0.49614000 -0.00415460 0.80986000 -0.00857660 -0.00857660 -0.46929000 -0.00650500 0.81103000 0.00000000 0.00000000 0.40111000 0.40111000 -0.46142000 -0.01023200 -0.01340200 -0.45811000 -0.00581400 0.00000000 -0.46515000 0.40611000 0.40611000 -0.02013800 -0.02013800 -0.02013800 0.41881000 -0.00401620 -0.00401620 0.00027728 -0.00373950 -0.00415460 0.00000000 0.80908000 -0.00539920 -0.00857660 -0.00857660 -0.00857660 0.41580000 0.41580000 -0.46334000 -0.00069303 -0.00069303 -0.00069303 -0.00069303 0.00000000 0.00000000 0.40111000 0.40111000 -0.46142000 -0.46142000 -0.01023200 -0.01340200 -0.01340200 -0.45811000 -0.00581400 -0.00581400 0.00000000 -0.47260000 -0.46515000 0.40611000 0.00819590 -0.02013800 -0.02013800 0.41881000 -0.00544820 -0.00235530 -0.00235530 0.000 0.000 0.401 -0.060 0.000 0.000 -0.458 0.000 0.000 0.421 -0.036 -0.447 0.406 0.000 0.000 0.000 0.000 0.000 0.511 0.419 0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.774 0.000 0.000 0.000 0.416 0.416 -0.457 0.811 0.000 0.000 -0.286 -0.133 0.000 0.000 0.401 -0.060 0.000 0.000 -0.458 0.000 0.000 0.421 -0.036 -0.447 0.406 0.000 0.000 0.000 0.000 0.000 0.511 0.419 0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.774 0.000 0.000 0.000 0.416 0.416 -0.457 0.811 0.000 0.000 -0.286 -0.133 7.8813489 NA 7.5363374 10.2037348 11.6418232 6.9960644 11.0520369 10.0658205 8.1020324 4.7318892 11.3913059 12.2157388 3.4401283 3.9040698 4.5821405 7.8371694 3.1056948 10.2237410 11.7120677 11.0118090 9.2580977 7.2078499 7.6801731 9.6313086 6.5421419 9.7533176 NA NA 11.6100467 9.1764654 7.4678370 8.1986896 6.5128779 10.5908004 10.7149617 4.9744559 8.2877733 -1.4177330 8.4323277 12.4954042 9.1472428 8.5835488 NA 7.3470127 8.8500977 3.7915953 5.7318892 NA 4.3635005 4.3788931 2.0415584 10.0057819 NA 9.7075541 10.1945486 9.7306174 5.7719648 10.1299993 11.0448986 8.4478738 1.9040794 3.4401283 10.9784780 -0.4179258 NA -1.4177330 3.0415759 13.622191 4.337026 8.816958 13.395220 9.966924 9.937492 12.721772 12.630883 8.391105 10.779050 13.793763 11.435060 9.675558 8.236777 1.167101 8.180193 11.245476 11.1386468 11.7982803 6.3830407 13.5925797 8.8640707 5.1968509 8.4070995 9.0799927 10.5488156 5.7318892 6.5305078 11.2554498 6.1968509 4.3370260 10.8421782 7.5594207 6.4058256 10.9525557 9.9962974 11.0382384 8.3083591 8.6854286 11.5565553 5.0899345 12.9597512 9.0456652 10.5128781 10.3403640 10.8568100 10.4924087 10.4513490 10.5279503 8.5651345 -1.4177330 8.9778354 8.6665372 11.6760534 3.8300727 11.4884677 6.0167682 10.4946559 10.1140095 7.3830407 13.6210169 9.6121180 10.0619210 12.6420766 10.4939072 NA -0.4179258 10.2838803 10.5888175 9.7854888 TCGA-AN-A0XN 68 0 NA 10 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 3 2 4 2 4 3 5 2 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 2.947777e-06 8.669932e-07 8.18181818181818 19.0909090909091 2.72727272727273 39.0909090909091 30.9090909090909 10.0833882 10.0860354 11.1089931 9.7419538 8.3142724 8.6166518 9.4208647 10.4045213 10.5506270 12.2836102 10.2666465 10.4530067 NA 11.3650150 3.9487971 10.4013365 5.9487971 8.8999870 9.7208181 11.5337588 NA 12.2772541 4.4864505 9.2960962 10.1050834 4.9487971 0.9945797 9.6248671 10.4581244 2.9014945 9.0754176 9.0430869 2.1645289 4.6950417 9.4814350 10.1238830 9.6863435 10.6701161 9.9223779 10.9988205 NA 10.4182412 15.7209645 9.0082717 9.1682772 11.1395769 11.8488840 4.3869144 3.9487971 9.6000796 10.6915676 NA 11.4287069 7.1844241 7.4944460 5.7360663 10.3422214 11.6184815 11.1964176 12.5042513 13.2280699 8.3847691 11.5009076 10.7707780 11.7101331 11.2285192 3.9945978 12.6594917 10.6023927 -1.0054927 10.6661411 9.7088456 2.9955026 6.8019553 10.8871428 9.9675798 10.0559712 9.9319739 5.4208664 8.8463491 13.7874411 11.6985036 9.9868303 9.2742106 0.5189100 1.2616000 0.6088200 0.2993100 -0.0900290 1.3683000 0.1807100 3.3893000 3.6569000 3.5499000 0.9150100 0.3938000 0.7629300 -0.0019399 0.5020300 0.3577300 -0.3428500 -0.0179410 -0.3395200 0.6137100 -0.3332900 -0.2946100 0.0246890 0.0246890 0.3492500 0.0479780 0.0199230 0.6542400 0.0210430 0.0162860 0.5016800 -0.1015800 -0.3927400 -0.7976100 0.3565900 -0.7766000 0.1807100 0.3063300 -0.3783100 0.0715350 -0.3863800 -0.4165200 -0.4999600 -0.3774100 -0.0322200 -0.3280900 -0.3986400 -0.3436600 -0.7240300 0.5020300 -0.2995700 -0.2903500 -0.3581800 -0.0179410 -0.3498500 -0.2434600 -0.3524800 0.0016642 -0.3368400 -0.3096800 -0.2946100 0.0246890 -0.3971900 0.3492500 -0.0142280 0.0198230 0.1177000 0.0413170 0.1090600 -0.344 -0.344 0.000 0.000 -0.358 0.000 -0.359 -0.332 -0.337 -0.323 -0.323 -0.295 0.000 0.000 0.000 0.301 0.000 0.000 0.491 0.000 0.397 0.000 0.109 0.000 0.000 0.000 0.000 -0.168 -0.168 0.000 -0.315 0.116 0.000 0.000 0.000 -0.417 0.753 0.000 0.000 0.000 0.000 -0.344 -0.344 0.000 0.000 -0.358 0.000 -0.359 -0.332 -0.337 -0.323 -0.323 -0.295 0.000 0.000 0.000 0.301 0.000 0.000 0.491 0.000 0.397 0.000 0.109 0.000 0.000 0.000 0.000 -0.168 -0.168 0.000 -0.315 0.116 0.000 0.000 0.000 -0.417 0.753 0.000 0.000 0.000 0.000 8.060689448 4.948797056 5.652810563 9.923858406 10.850247170 6.113956731 9.911972095 10.161014195 7.963266606 -0.005347871 12.669895514 11.877816053 2.454044254 1.801944990 1.801944990 8.323275033 4.316529541 11.061361944 11.687869169 10.498922486 8.830650518 5.749488680 7.338895906 9.479422981 6.925337240 10.479422880 -0.005347871 -1.005492684 11.061361944 5.960384282 7.667025652 8.531818492 6.667024942 10.063895354 10.293808085 4.204054616 8.338895906 NA 8.771033149 12.946704199 7.049882303 8.097887806 -1.005492684 5.223418688 8.418766354 4.204054616 3.164528861 NA 4.801955334 4.359521170 2.579566360 10.257282112 -1.005492684 6.154471821 10.327755393 9.983284650 5.722520671 9.359828830 12.968924965 8.829070997 3.454031090 5.164524838 10.666141079 4.695041721 NA -0.005347871 2.164528861 13.040871 6.184425 8.057995 11.365015 9.741954 10.942237 11.533759 11.921822 9.416665 10.721670 13.006875 10.907115 9.600080 8.682850 -1.005493 7.352152 11.191202 11.0586691 11.2371787 6.7293094 13.5411322 9.1290264 6.7890158 8.5063528 8.1670277 9.6754518 6.7360663 3.9945978 10.2666465 7.3344503 4.4540311 10.6505779 7.4662755 7.2616671 12.8125829 10.3756022 10.5078342 7.9708203 7.4250522 12.7620603 4.1238814 10.9881682 9.6863435 10.2228175 9.8518035 10.5701393 10.2210122 10.8607198 10.4519809 9.2915163 5.3165295 8.9249087 7.8525813 10.6915676 3.6950362 11.4287069 10.5004116 10.0827257 10.3422214 7.6563784 14.1706952 10.1881254 10.4213889 12.8313408 10.7326922 0.9945797 NA 10.3057806 10.2794242 9.5530208 TCGA-AN-A0XO 59 0 NA 375 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 1 2 2 2 2 3 4 2 2 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.733986e-07 13.0434782608696 39.1304347826087 8.69565217391304 13.0434782608696 26.0869565217391 9.5888917 10.2531174 12.3211365 9.5690513 8.5095276 9.1190376 10.6129217 9.4666975 9.7186767 13.3208559 11.3544891 10.7339282 -0.2297207 13.3475417 4.1853433 9.9687546 6.5776645 8.4380125 9.8165240 13.3433650 3.0922413 13.6366548 7.9064463 9.3675862 11.7260805 6.6406744 NA 8.1219852 11.0697084 1.6447792 7.0433281 8.6053073 -1.8145140 4.0922413 9.9568366 10.5655375 9.4093487 12.5040311 10.2684939 11.4772372 3.2297417 11.6137072 14.9078478 8.5440313 9.2807441 10.8289778 11.2087549 4.2728070 5.1965756 9.4129629 12.6755712 NA 11.8964762 5.6931412 3.5776584 4.2514389 9.8137926 12.4198651 11.1162692 12.8150452 12.8029867 8.4201645 11.4129630 11.0351665 11.4553503 11.3317566 5.3042883 13.6524431 12.2069343 1.3552982 10.5010627 8.9568364 2.1862470 1.3552982 10.2321300 9.4620531 9.8480154 9.9435702 4.5947396 10.7235360 13.5296083 11.5717485 10.4681460 9.7089090 0.5606300 1.1736000 0.1715100 0.7694500 0.0108420 0.5764800 -0.0221950 -0.0221950 1.1556000 0.1754300 0.3723200 -0.0580580 -0.0580580 -0.0511810 -0.0511810 -0.0511810 0.2191400 0.2191400 0.2071700 0.0458490 -0.1080200 0.0810330 0.0810330 0.0810330 -0.0232920 -0.0232920 -0.0232920 0.1041000 0.0041632 -0.0714720 -0.0253460 0.1715100 -0.6039000 0.0000000 0.5764800 0.5764800 -0.0221950 -0.0221950 -0.0221950 -0.0269880 -0.0269880 -0.6478100 -0.1063100 -0.1063100 -0.1063100 -0.0764120 -0.0580580 -0.0258930 -0.0511810 -0.0511810 -0.0511810 -0.0511810 0.2191400 -0.4278300 -0.4056200 -0.5961400 0.0587950 0.0587950 -0.1080200 -0.5301200 -0.6499600 0.0810330 0.2056400 -0.0232920 -0.0232920 0.1041000 0.0576530 -0.5445100 -0.5445100 0.000 0.000 0.000 0.000 -0.209 -0.428 0.207 0.000 -0.108 0.174 0.174 -0.650 0.000 0.000 0.164 0.000 0.000 0.000 0.467 0.104 0.104 0.000 -0.545 0.000 0.000 0.172 0.172 -0.604 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.000 0.143 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 -0.428 0.207 0.000 -0.108 0.174 0.174 -0.650 0.000 0.000 0.164 0.000 0.000 0.000 0.467 0.104 0.104 0.000 -0.545 0.000 0.000 0.172 0.172 -0.604 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.000 0.143 0.000 0.000 0.000 0.000 8.2674960 6.6406744 5.9064457 10.8422188 11.2827208 6.4367349 11.9844263 8.2498340 8.5016286 -0.2297207 11.5420741 11.4546841 2.2727996 2.2727996 2.3552700 7.7926771 3.3146240 9.8018959 11.4045156 10.8208385 9.2399515 3.5776584 7.5989748 10.1060720 5.1965756 5.9535307 1.9926959 NA 11.1017864 5.3248970 7.0339702 8.4603076 9.0854592 10.8977794 10.5263098 -0.8147677 8.4603076 -0.8147677 7.3376317 12.2502582 7.5947381 7.5947381 -0.2297207 1.3552982 8.8727226 3.8857891 4.4521341 -0.8147677 0.7702793 4.5506175 0.9926959 10.8057960 -0.8147677 9.0641642 10.4030019 9.4568100 4.3350973 9.5973876 11.4603075 6.1042108 -0.8147677 2.6447792 11.1812908 3.4707451 0.9926959 2.0922413 1.1853591 13.791204 5.507275 8.755203 13.347542 10.141723 11.303964 13.343365 12.667777 9.467856 11.098049 13.465973 9.364012 9.412963 10.281733 NA 7.389918 11.695740 11.2085816 12.8786707 6.8255923 13.4829419 8.4415557 3.9667073 8.9975244 8.6861888 10.4915056 3.8000612 7.3452181 11.3544891 6.7245057 4.2938707 11.6404174 7.4497900 6.9325998 12.1397251 10.3646341 10.5406981 8.9568364 9.1190376 12.9445591 2.2727996 11.9097138 9.4093487 10.2534535 10.1245590 11.4898410 11.2012847 9.5224115 10.6946272 9.3068806 10.0158623 9.3425676 9.1607939 12.6755712 2.6447792 11.8964762 7.4959597 10.2297411 9.8137926 7.6408183 13.7212603 10.2588192 10.6836977 13.3402838 10.8595393 -0.2297207 NA 9.8573304 10.5494817 9.4793933 TCGA-AN-A0XP 69 0 NA 9 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 1 2 1 5 2 4 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.733986e-07 21.7391304347826 34.7826086956522 4.34782608695652 8.69565217391304 30.4347826086957 10.22611013 9.85092550 11.79888588 9.68219298 8.39788423 9.63571522 10.96763861 9.46506107 10.65108632 13.97814026 11.18346387 10.50774371 0.36311499 13.21033856 3.85494316 9.17686652 6.12463625 8.01234184 10.29308351 13.59201681 -1.63710936 14.23624112 6.10455263 9.02930932 10.81892635 7.75110281 -1.63710936 10.42984733 9.58225397 -0.05199728 6.28789703 6.92150655 NA 3.88664769 10.31582670 10.18963396 10.27035163 11.96717527 10.17526273 11.83818551 -1.63710936 11.36149955 14.51649891 7.96552458 9.19597549 11.21620002 11.61441990 3.26997568 -0.05199728 8.96485633 12.94021916 -1.63710936 10.68501356 4.51283368 3.68500944 4.14444616 10.46374771 11.68951491 9.98742391 12.07550495 12.68388597 7.91575452 10.08631977 9.75593942 11.07216926 10.98833767 5.09100582 11.76449831 9.48656013 NA 10.21053437 9.00964418 3.57292604 4.57253804 10.15424826 10.45253593 10.31837209 9.78515017 2.94804011 9.19042819 12.42723872 11.28474043 10.16842630 9.21170825 0.89708000 0.89708000 0.01321300 0.01000000 -0.30569000 0.01279500 0.00027728 0.00898630 0.00000000 0.00000000 0.00000000 -0.31541000 -0.30095000 0.00013863 0.00013863 0.00013863 0.00041593 0.00041593 0.01377200 0.00221930 -0.00788630 -0.71051000 -0.01876500 -0.01876500 -0.04278800 -0.04278800 -0.04278800 0.63244000 -0.37775000 -0.34400000 -0.29619000 0.01321300 -0.32898000 -0.30569000 0.01279500 0.01279500 0.00027728 0.01782400 0.01084200 0.00903120 0.00903120 0.00000000 0.00000000 0.00000000 0.00000000 -0.01230000 -0.30095000 -0.30095000 0.00013863 0.00013863 0.00013863 0.00013863 0.00041593 0.00041593 0.00041593 0.01377200 0.00221930 0.00221930 -0.00788630 -0.73225000 -0.71051000 -0.01876500 -0.73810000 -0.04278800 -0.04278800 0.63244000 -0.00539920 -0.02908400 -0.02466100 -0.291 -0.291 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.673 -0.682 0.000 -0.680 -0.680 0.000 0.000 -0.344 0.553 0.632 0.632 0.000 0.000 -0.298 -0.298 0.000 0.000 -0.306 -0.306 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.291 -0.291 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.673 -0.682 0.000 -0.680 -0.680 0.000 0.000 -0.344 0.553 0.632 0.632 0.000 0.000 -0.298 -0.298 0.000 0.000 -0.306 -0.306 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.74786905 -0.63688501 5.71181425 10.10455237 11.39805627 6.86356931 11.58149728 8.55893724 9.22881869 NA 11.31163514 11.84139876 2.88664769 0.68499822 2.06353746 7.89446675 2.36308695 11.92210394 11.84223412 11.13292329 9.35602383 8.24113611 7.39925912 9.94004207 6.26395270 3.00694426 1.17043787 NA 10.92723492 4.42917405 5.57253804 8.17365715 3.94804945 10.40234721 10.71236664 1.82252622 7.97595398 NA 7.92341841 11.67213540 7.93673274 9.56337095 -1.63710936 2.82252622 8.62400509 0.68499822 3.45055144 NA 1.53301507 5.35245134 -0.05199728 9.98192969 -1.63710936 5.18326418 10.54268358 9.79510521 4.36308695 10.06828574 13.91145582 6.57740466 1.82252622 2.88664769 11.37919726 4.78934845 NA -0.05199728 1.36305891 13.752163 4.552912 8.080762 13.210339 10.658567 10.927949 13.592017 12.859128 8.961138 10.863890 13.621357 8.682758 8.964856 9.558458 -0.636885 7.331752 12.022970 11.01166769 11.99323877 8.07094472 13.61726296 8.98605249 2.88664769 9.09270614 8.48072841 10.29704900 5.19597352 8.34892729 11.18346387 7.34322481 -0.05199728 11.10980963 4.24573143 6.30964005 10.74678973 10.25714525 11.15180378 9.03727761 8.09610053 13.53687965 2.06353746 10.99591933 10.27035163 10.83552243 10.01234156 11.21580999 9.41497417 10.03992400 10.98788090 9.46111760 NA 9.38404462 6.55646314 12.94021916 2.36308695 10.68501356 7.33175179 10.37011272 10.46374771 7.10117731 12.40243291 10.18804418 10.62987195 13.50734534 9.81892627 -1.63710936 NA 10.14157329 10.88836152 9.82763121 TCGA-AN-A0XR 55 0 NA 10 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 7 white not hispanic or latino 1 1 2 1 NA NA 4 1 3 4 NA NA 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 1.733986e-07 11.1111111111111 25.9259259259259 0 51.8518518518518 11.1111111111111 10.0236518 8.8829361 11.8446925 8.5505479 8.9592088 9.3855850 10.6996452 9.3622139 9.6768739 12.7416140 11.6289063 9.6717645 2.6324776 11.7229451 2.3105437 9.1189797 7.2214441 7.9423350 9.8904961 13.4308976 1.7256103 14.2052748 7.6082326 9.1054657 11.1620405 7.7997304 0.3105728 9.2114184 9.9495910 0.3105728 7.9663803 6.3105510 NA 1.7256103 9.4389758 10.2963936 8.7071565 12.0283709 9.8664190 10.6992866 NA 11.5905492 13.7389555 9.1276952 10.7308418 10.6017224 10.9264878 5.1349807 NA 8.2954448 11.3986774 NA 10.9110842 3.0475209 3.8130526 4.4535110 9.7135637 12.2168160 10.4708434 11.7190584 12.7559977 7.0384724 10.6112856 10.2853009 10.9538066 11.3185134 4.6324776 12.9622762 10.4325168 -1.2743897 10.3171116 8.6884853 3.5845657 3.3105583 10.7923512 10.1162956 10.3250372 9.4173327 -1.2743897 9.1360406 11.6345447 11.0037482 10.5901623 9.9123225 0.74706000 0.76195000 -0.00237170 -0.00237170 -0.00292550 -0.00181780 0.01166200 -0.01424400 -0.00638320 -0.00638320 -0.00638320 0.01068600 0.01068600 0.01355000 0.01355000 0.01355000 0.00470250 0.00470250 -0.00748840 -0.00665950 0.02270800 -0.75764000 -0.78379000 2.14300000 0.05735100 0.05735100 0.05435900 0.03127900 0.06478000 0.00595350 -0.00831680 -0.00237170 -0.00292550 -0.01994800 -0.00181780 -0.00596860 0.01166200 -0.01424400 -0.01080000 0.01417400 -0.00015504 -0.00638320 0.00201270 0.00201270 0.75163000 0.79024000 0.01068600 0.01068600 0.01355000 0.01355000 0.00164780 0.00164780 0.00470250 0.01976600 0.01976600 -0.00748840 -0.00665950 -0.00665950 0.02146000 -0.83149000 -0.81116000 -0.78379000 0.01152300 0.05735100 0.05435900 0.02522700 0.02355000 -0.81230000 -0.80004000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.010 -0.812 -0.800 -0.800 0.000 0.000 0.000 0.000 0.000 0.741 0.000 0.000 0.000 -0.800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.751 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.010 -0.812 -0.800 -0.800 0.000 0.000 0.000 0.000 0.000 0.741 0.000 0.000 0.000 -0.800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.751 0.000 0.000 8.7114312 NA 3.3694386 11.2053695 12.0616773 7.8612730 11.4449781 7.4667862 9.1982699 NA 11.5638083 10.4483157 1.3105728 3.8548734 0.3105728 7.4050691 1.3105728 11.0276569 11.7555666 11.3946957 9.2647480 1.3105728 7.9203463 9.9092247 4.1179028 3.2491571 3.1179111 NA 10.4573325 7.6264559 5.6681049 8.2705537 5.1179069 10.5675191 10.6692029 -0.2743897 9.2333838 NA 4.9923742 11.2923568 9.4050693 7.3622139 NA NA 7.3766412 NA 2.9735194 NA 2.0475035 5.9735171 -1.2743897 10.1977724 NA 4.1850181 10.3572210 9.2628076 5.2333858 9.2134292 13.8979386 6.5584789 1.3105728 2.5329403 10.9705476 3.8955159 NA 5.3255015 NA 14.229583 6.126469 7.867696 11.722945 10.605173 11.147917 13.430898 13.104494 8.849711 10.467477 13.109563 8.602106 8.295445 10.098998 3.185026 9.268621 10.667737 11.4796416 12.5746033 7.1602173 13.4803687 9.1060287 1.0475384 9.2820953 7.9853325 11.5474569 5.0475166 9.2164401 11.6289063 5.9544080 NA 10.6219216 5.8445313 7.1634665 8.9532053 10.0825914 10.5909359 6.2801787 9.9411222 11.9044097 2.1850102 11.9898471 8.7071565 11.1429144 9.9405155 11.5716672 9.3161763 9.9197305 11.0779086 8.7396098 0.7256103 9.8197593 8.5990332 11.3986774 1.8954965 10.9110842 9.1911557 11.4074864 9.7135637 7.3292160 13.0961404 10.9483842 10.6169933 11.8503568 10.7930236 -1.2743897 -1.2743897 9.7617628 9.9723298 10.0587445 TCGA-AN-A0XS 63 0 NA 10 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 2 1 1 2 2 4 4 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.040392e-07 33.3333333333333 19.047619047619 0 28.5714285714286 19.047619047619 10.368989 10.032723 11.494445 9.417042 8.767526 9.380003 10.395494 9.543780 10.105170 12.987094 9.095287 10.555110 1.708982 12.844061 2.293959 9.970148 3.972031 8.663189 10.051512 13.119232 2.474540 13.139655 1.708982 10.429179 11.802675 2.779386 NA 10.068251 9.715179 2.387059 7.406656 7.223116 NA 6.699947 9.237252 10.020968 10.567596 12.088588 9.926708 10.996705 3.030919 12.272380 14.879419 8.364001 9.892380 11.783803 11.294894 4.219958 -1.613079 9.073565 12.652460 2.387059 10.929129 6.317802 6.425985 5.128533 10.395844 11.694693 10.350684 13.272285 12.868738 8.043490 11.102383 10.734418 11.016649 11.149032 4.672465 12.052512 10.968265 NA 10.551029 9.648572 2.407652 5.986977 10.912830 10.757480 9.841364 10.819607 5.615884 9.655022 12.803401 11.448098 9.861278 10.049733 -0.2086800 -0.2071300 0.0222590 0.0222590 -0.2656800 0.0235210 0.0115550 0.0174990 -0.6471600 0.9319700 1.4452000 -0.2721600 -0.2721600 -0.2790900 -0.2790900 -0.2790900 0.0237140 0.0237140 0.0287170 0.0194460 -0.2833000 0.0520530 0.0520530 0.0526220 0.0435360 0.0435360 0.0435360 0.0514840 -0.1807200 -0.2086800 0.0013423 0.0222590 -0.2656800 -0.2716900 0.0235210 0.0235210 0.0475060 0.0174990 0.0174990 -0.2862700 -0.2933600 -0.6471600 -0.2811200 -0.2811200 -0.2811200 -0.2811200 -0.2721600 -0.2721600 -0.2790900 -0.2790900 -0.2790900 -0.2790900 0.0237140 0.0237140 0.0333630 0.0287170 0.0194460 0.0194460 -0.2741300 -0.6154400 0.0520530 0.0520530 0.0433950 0.0618910 0.0435360 0.0514840 -0.2628000 -0.2578500 -0.2578500 -0.272 -0.272 -0.279 -0.279 0.000 0.000 0.000 0.000 -0.274 0.891 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 -0.209 0.000 0.000 -0.263 -0.258 0.000 0.000 0.000 0.000 -0.266 -0.266 0.000 0.000 0.000 0.000 -0.286 -0.286 0.285 1.445 -0.281 -0.281 0.000 0.000 -0.272 -0.272 -0.279 -0.279 0.000 0.000 0.000 0.000 -0.274 0.891 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 -0.209 0.000 0.000 -0.263 -0.258 0.000 0.000 0.000 0.000 -0.266 -0.266 0.000 0.000 0.000 0.000 -0.286 -0.286 0.285 1.445 -0.281 -0.281 0.000 0.000 8.3398059 NA 6.5768894 10.8104434 11.5496136 6.6961316 10.7550256 9.2690123 9.3735540 1.5569934 11.4580244 11.4354530 3.2450392 4.3643413 3.8133297 9.0336237 3.4314625 11.2960204 11.2614699 10.0896705 9.1149854 -1.6130787 7.4982006 10.2700899 8.0072847 8.0577210 -1.6130787 NA 11.0166492 7.2512514 7.0700597 7.8028065 9.5208493 11.4700638 9.9781197 4.7089928 8.7368991 NA 7.6278563 12.3157683 9.1879647 7.9358870 -0.6128581 5.6908445 7.6999479 -1.6130787 4.7089928 NA 6.2635809 5.5491547 4.5569873 10.5747262 NA 7.7112457 10.4955893 9.6608605 6.0309209 10.1928088 12.7727251 8.9027646 4.4094317 4.9106271 11.3989910 2.6349882 -1.6130787 0.3870316 1.9720309 12.40029333 4.47452690 8.55071447 12.84406092 10.30961959 9.95692046 13.11923231 12.46613294 9.16349798 10.76725537 12.55063593 8.50210859 9.07356534 9.16842467 -0.02796912 7.74021184 11.35339007 10.9392536 11.9856990 7.3814184 13.0570550 8.7566621 7.1149854 9.6805366 8.1030271 10.4187660 7.6086518 8.4625440 9.0952865 5.9569209 0.3870316 10.6526799 6.3118773 6.6422828 10.7221760 10.6341023 10.5182788 9.3207554 8.6158834 11.8026746 8.3514057 11.1073177 10.5675956 10.6605691 9.8561978 11.1804650 10.0634628 10.2469878 10.2943311 8.9262236 -1.6130787 9.7166034 7.6128508 12.6524602 9.0209683 10.9291294 7.8648231 10.5418830 10.3958436 6.7621043 13.5382797 10.1335792 10.3077900 12.8934964 11.0512899 4.1944181 -1.6130787 9.9767160 9.8804200 9.6403214 TCGA-AN-A0XT 54 0 NA 10 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 1 4 1 2 2 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 2.427581e-07 2.427581e-07 26.6666666666667 6.66666666666667 6.66666666666667 40 20 10.003259 10.116916 11.435926 9.005077 8.830147 8.665170 10.712674 9.594474 9.866604 14.169575 8.379576 10.789231 NA 12.069629 3.831512 8.060915 7.302819 8.183724 7.708960 13.582652 5.278973 14.350673 7.708960 9.256761 10.629470 6.356975 NA 10.090329 7.678903 2.246560 7.518438 5.809486 NA 5.487560 9.639649 9.847815 9.815025 11.908005 9.806015 11.341229 3.874581 12.288583 13.916845 6.311231 10.424197 11.142746 10.120275 3.787119 5.916403 9.729634 11.870599 -1.212902 11.373021 4.246553 4.764399 3.430981 9.488426 11.887289 10.446223 11.774916 12.726331 8.362659 10.365964 10.293645 11.310436 11.084322 5.126969 12.423178 12.944466 NA 10.202861 9.043328 4.753594 3.645102 10.790286 11.096880 11.113830 9.942570 3.916400 9.313619 12.075120 11.257270 9.481477 10.375366 0.00083195 -0.00277070 0.00027728 0.75166000 -0.80169000 0.00917050 0.00208050 0.00208050 0.78099000 -0.00636680 -0.00664780 0.00000000 0.00000000 0.71999000 0.00597000 0.00597000 -0.02283400 -0.02283400 0.79026000 0.00583090 0.00291330 1.39610000 -0.78058000 -0.78058000 0.73303000 0.00610900 0.00610900 0.00513590 -0.78134000 0.00083195 -0.38593000 -0.79745000 -0.80169000 -0.80169000 0.00917050 0.00917050 0.00208050 0.00208050 0.00208050 -0.01395300 0.00750000 -0.80782000 0.00060517 0.00060517 0.00060517 0.00833510 0.00000000 0.00000000 -0.79344000 0.00597000 -0.79285000 -0.78522000 -0.02283400 -0.02283400 -0.00940460 -0.80269000 -0.79686000 -0.79686000 0.00291330 -0.78606000 -0.78311000 -0.78058000 0.04812000 -0.76510000 0.00610900 0.00513590 -0.81269000 -0.78319000 -0.78319000 0.000 0.000 -0.793 -0.793 0.000 0.000 0.000 0.000 0.000 0.762 -0.786 -0.783 -0.783 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 -0.783 -0.386 -0.386 0.000 0.000 -0.802 -0.802 0.000 0.000 0.000 0.000 -0.803 -0.803 -0.801 0.000 0.000 0.000 -0.263 -0.263 0.000 0.000 -0.793 -0.793 0.000 0.000 0.000 0.000 0.000 0.762 -0.786 -0.783 -0.783 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.806 -0.783 -0.386 -0.386 0.000 0.000 -0.802 -0.802 0.000 0.000 0.000 0.000 -0.803 -0.803 -0.801 0.000 0.000 0.000 -0.263 -0.263 8.5235212 NA 6.9670291 10.4128283 10.1821180 6.2380837 10.7336602 9.8291344 8.7208099 2.8745806 11.0394892 10.8077001 3.5944769 1.5944530 5.9867909 7.9112410 3.2465449 9.7765140 11.8620971 10.6693804 9.1911967 NA 7.4417557 10.3262782 6.8532085 5.3720815 NA NA 10.6120782 7.8719280 10.0736771 8.0585822 7.2424463 10.5798569 10.3488847 2.1090596 8.4542310 1.1090262 7.7059827 12.1721729 9.7686867 8.8232930 NA 0.7870981 8.4327778 1.9570602 5.6450993 0.7870981 3.6940110 4.0810072 -1.2129019 10.0356400 NA 9.2909452 10.7500154 9.8930280 5.6574828 9.2998598 11.2196613 7.1225102 1.7871399 3.5420104 12.8422324 2.3720885 NA -1.2129019 2.6940110 13.265155 3.109043 7.770113 12.069629 10.766187 10.078290 13.582652 13.947897 9.275964 10.897603 12.554994 10.922187 9.729634 7.929226 3.310675 6.758663 11.874251 11.145496 12.569708 7.140266 14.211939 9.011121 4.487557 9.325308 7.379577 10.983383 4.764399 6.681937 8.379576 7.770113 NA 10.730733 4.741316 6.254889 11.397221 10.564375 9.809487 6.820543 7.170823 12.747574 5.109047 12.147913 9.815025 10.355076 9.622380 11.796248 9.785005 10.379576 10.657099 8.412828 NA 8.258754 6.827354 11.870599 5.946990 11.373021 5.278973 11.195715 9.488426 7.238330 13.765830 10.224351 9.853209 11.967961 9.345540 1.594453 3.542010 11.029400 9.382377 10.121393 TCGA-AN-A0XU 54 0 NA 10 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 4 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 2.358222e-06 5.895554e-07 10.3448275862069 20.6896551724138 2.29885057471264 42.5287356321839 24.1379310344828 9.1247306 9.6863508 11.3573913 9.8444955 9.0127371 9.6766643 9.5039271 10.7627329 11.0175414 12.2365038 9.8488149 10.6101574 -1.5370054 12.4326987 2.1634021 9.2253345 6.3995898 9.5411032 9.7684442 4.4629554 NA 8.7781021 7.6253436 9.3877649 11.5178959 4.8723412 0.4629946 10.0374419 11.1311727 4.2958406 7.6177708 8.1651251 -1.5370054 5.8379912 9.5303868 10.5623002 8.8871188 9.2077862 11.5509125 7.9786521 1.0478873 9.5831904 14.7639663 8.8982997 8.9386860 10.8125102 11.6633914 4.1068089 -1.5370054 9.3516957 10.9001844 -0.5370054 10.4323391 6.9507927 7.4430919 6.1633921 8.4258487 12.0477976 9.3683395 12.3596633 13.5069196 6.9264763 10.7755518 10.7879403 11.6974706 11.4352143 5.2178395 12.4565985 9.1993543 -1.5370054 10.7108800 9.7238720 3.6727987 3.6328731 10.2451317 10.3641965 11.2735241 9.8369051 6.5073459 8.7837529 12.5292099 11.8496233 10.1780565 9.4713812 0.7202400 0.0275450 -0.0023084 0.1708100 0.6383500 0.3368000 -0.3746700 0.8949400 -0.6412000 0.0674230 1.3372000 0.9160300 -0.1938300 0.6585400 -0.6757500 0.5335000 0.2664500 0.0822360 0.2869600 -0.1919500 0.3493000 -0.3370600 0.2027900 0.1951600 0.0500140 0.6546700 0.0101930 0.0881620 -0.3156000 -0.2495400 0.0604140 -0.6535700 -0.6636200 -0.2169400 -0.6705500 -0.6705500 -0.3451100 0.8949400 0.6119600 0.0000000 0.6379800 -0.6853600 -0.0351300 0.0030992 -0.6606500 -0.6485300 -0.9207500 -0.5003400 -0.6229000 -0.6670400 0.1323300 0.0800730 -0.5410500 0.0312020 -0.6627100 -0.3400600 0.0945410 0.0945410 0.7574500 0.7401100 -0.6812800 -0.3552800 -0.3550600 -0.6566500 0.0101930 0.0154950 0.0777670 0.0974460 -0.2267700 -0.194 -0.194 0.132 0.132 0.000 0.000 -0.225 0.000 0.426 0.027 -0.187 -0.325 -0.325 -0.333 -0.333 0.000 0.000 -0.316 -0.316 0.000 0.000 0.000 -0.200 0.000 0.000 -0.208 -0.208 -0.664 0.000 0.729 -0.650 0.000 0.000 0.000 0.000 -0.641 0.000 -0.652 -0.652 -0.113 -0.113 -0.194 -0.194 0.132 0.132 0.000 0.000 -0.225 0.000 0.426 0.027 -0.187 -0.325 -0.325 -0.333 -0.333 0.000 0.000 -0.316 -0.316 0.000 0.000 0.000 -0.200 0.000 0.000 -0.208 -0.208 -0.664 0.000 0.729 -0.650 0.000 0.000 0.000 0.000 -0.641 0.000 -0.652 -0.652 -0.113 -0.113 9.19427153 NA 4.19087556 10.43593232 12.17794921 5.76362403 11.16577448 8.55829672 7.52118818 -0.53700539 11.90083455 10.76514874 5.48532055 NA 5.30844097 8.98258865 5.17719626 10.29781847 11.21386875 11.19023483 8.79498893 6.12828928 9.40326602 9.43449604 6.25736898 8.60378210 1.63287309 0.04795711 9.34176987 0.46299461 10.66568855 8.60122443 9.00404907 10.20477335 10.92058986 0.04795711 9.85204598 6.58707390 9.16425883 12.76773159 9.05447490 12.96173938 0.78483897 5.07766173 7.47138096 -0.53700539 6.60250439 NA 5.06286429 2.55296721 7.20104471 11.60521911 7.75066478 11.44505479 11.27251968 10.65246821 6.82489639 10.22034253 14.39375911 9.21616915 5.01754337 3.59222978 10.15556799 1.78488084 6.12116464 0.46299461 4.32093229 10.545611 8.115797 8.890265 12.432699 10.071549 10.847197 4.462955 7.378832 10.180119 11.719898 13.191989 11.177842 9.351696 8.420055 1.632873 8.219509 10.671187 10.246769 11.990552 6.032808 13.843614 8.192573 7.587074 7.088661 5.149454 9.244566 6.451636 5.652776 9.848815 10.517557 2.270320 11.335820 6.807248 10.054358 13.274227 9.375093 11.502043 8.462614 7.652777 9.321711 7.732079 10.880776 8.887119 10.340237 9.259803 12.714731 10.040853 11.401613 10.337934 10.059142 5.345595 9.425899 10.350980 10.900184 7.759869 10.432339 8.032808 10.332932 8.425849 8.416087 13.028471 10.595131 11.327912 13.359379 10.595452 1.784881 -1.537005 10.427293 10.631311 9.012737 TCGA-AN-A0XV 67 0 NA 162 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 7 white not hispanic or latino 1 2 3 2 NA NA 4 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.387189e-07 23.0769230769231 19.2307692307692 3.84615384615385 30.7692307692308 23.0769230769231 10.84162465 10.17648784 11.65113176 9.23066200 8.32073287 9.50509459 10.30690062 10.19763138 10.22057906 13.85234395 11.19977159 10.80778831 4.15237815 12.07975163 3.83750936 9.50440210 6.73734335 8.54738929 11.22394781 13.16453925 1.80190361 13.67744046 4.23484617 9.66843261 11.07847281 7.42832248 0.06488285 9.37021922 12.07649419 2.72787690 7.82425106 7.21466494 2.18040251 5.99565410 9.80638448 10.46045160 9.96578428 10.92238014 9.96477780 11.19505896 3.64987983 12.00265910 14.69552589 8.27503685 9.55876623 11.54469774 10.98774961 4.52435209 4.66978081 9.33092315 11.28428769 NA 10.97130708 5.93116535 6.07986874 4.23484617 10.09512481 11.93155247 10.12155514 11.76333277 13.02195905 7.43123934 11.02032523 10.62754784 11.51320588 10.81674049 4.66978081 11.71850899 10.61950637 0.06488285 10.00840915 8.79397162 3.33892353 4.98774834 10.81785561 10.25103166 10.18601925 12.44276063 3.68941099 9.14529100 13.44542364 11.95695424 8.84846145 9.33404418 2.0846e-02 -5.7320e-03 -8.8803e-04 -8.8803e-04 5.3573e-03 2.7180e-03 -4.6259e-03 0.0000e+00 6.6578e-01 5.2916e-01 2.1938e-01 -4.3492e-03 2.2146e-03 7.7547e-04 -9.3810e-03 -9.3810e-03 3.6899e-03 -6.5613e-03 -4.9959e-01 1.1916e-03 -3.2423e-03 8.2178e-05 8.2178e-05 8.2178e-05 -1.6623e-02 -1.6623e-02 -1.6623e-02 7.4651e-02 2.0846e-02 2.0846e-02 -1.9963e-03 -8.8803e-04 5.3573e-03 3.1345e-03 2.7180e-03 2.7180e-03 -4.6259e-03 0.0000e+00 5.9133e-03 5.7453e-02 5.6170e-02 -5.8180e-01 -5.0592e-01 -1.0142e+00 -2.4117e-03 -5.2250e-01 2.2146e-03 2.2146e-03 7.7547e-04 -9.3810e-03 -4.7642e-03 -4.7642e-03 3.6899e-03 -7.1139e-03 -7.1139e-03 -4.9156e-01 1.1916e-03 1.1916e-03 -3.2423e-03 5.7453e-02 8.2178e-05 8.2178e-05 2.4210e-02 -1.6623e-02 -1.6623e-02 8.3139e-02 1.1343e-02 -2.9304e-02 1.5390e-02 0.0 0.0 0.0 0.0 0.0 0.0 -0.5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 -0.5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 8.5949986 4.6498798 5.2873098 10.0113364 11.1821276 7.3140149 10.9637708 9.4338894 8.3716930 2.5674238 11.7269924 11.5093820 3.3868523 4.9228971 4.8375094 8.2061734 2.8722772 10.6765571 11.5109669 10.2905266 8.7443976 7.1165800 7.9976244 10.0364610 6.9956552 6.7135749 1.9393770 NA 11.1122686 7.5460440 7.4312393 8.1093115 5.3379358 10.0748907 10.3671756 4.0345415 7.8308942 -0.5199417 8.4841756 12.6346940 9.2104252 7.4370571 -1.5199417 7.1803945 8.5500761 5.7373434 3.7653544 2.5674238 6.3868454 5.6020055 2.4799548 10.3860940 -0.5199417 9.5133780 10.3819532 9.9882450 5.6398254 10.6227002 12.6797040 8.1629497 4.5023242 3.6498798 12.0564393 1.0649518 NA 2.5674238 2.2873245 13.55595465 4.58848079 9.20361596 12.07975163 10.19591694 10.76506817 13.16453925 11.78030756 9.27923657 10.73586873 12.99380592 11.86257901 9.33092315 8.29853735 0.06488285 7.08728568 11.33131362 10.661107 11.605368 6.951630 13.581396 9.031663 6.502323 9.098341 8.356472 9.212106 6.145290 8.450061 11.199772 5.756079 3.689411 11.175618 4.669781 7.080723 11.099487 10.498155 10.947561 9.091902 7.916667 12.195381 6.718360 12.639476 9.965784 10.392844 9.822585 11.831722 9.792838 10.704861 10.539975 9.076145 5.931165 8.999493 7.986739 11.284288 7.398818 10.971307 7.548733 11.095104 10.095125 7.131007 13.830376 10.551417 10.853364 12.417605 9.684526 2.180403 -1.519942 10.806384 10.472893 9.765935 TCGA-AN-A0XW 36 0 NA 170 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 3 2 1 3 6 2 2 2 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.583437e-06 1.699307e-06 4.2654028436019 87.6777251184834 1.8957345971564 4.2654028436019 1.8957345971564 10.1091181 10.1472311 11.4408712 8.8988704 8.5863181 9.7207653 9.1896593 10.5848573 10.0526362 13.6274785 11.2590871 10.7147666 -1.3621579 12.1452501 3.7672310 9.5205941 5.7672337 8.5236474 8.6932336 12.8095187 -0.3619725 12.8393857 2.5448316 9.4184662 10.2462058 8.3521966 0.6379348 9.6237930 10.2229135 3.7672310 7.2961628 8.1886976 -0.3619725 5.4834418 9.6999971 10.7425498 9.2609179 11.4801049 9.4428886 11.0534287 0.2229282 10.5002009 15.0611818 7.9935442 9.4881378 11.4891144 10.6813201 5.2818058 2.9598814 9.2294733 11.3762544 -1.3621579 11.5653586 5.9047370 7.9910978 5.5568156 10.5627635 12.0521077 10.0704929 12.1943373 12.9803035 8.6754980 11.4170548 10.8116281 11.4191057 11.4335848 5.2961637 12.4354099 12.2354217 1.2229282 10.2818072 9.0324136 2.5486832 5.8078752 10.1318064 10.7435321 9.8296271 10.0642157 3.7672310 9.3590502 13.0135335 12.0502562 10.0194940 9.3886580 0.5124600 0.6503800 0.0053375 0.0157270 0.0449990 0.0189430 -0.0044312 3.6569000 -0.0077704 -0.0077704 0.0185230 0.0035797 -0.5224600 0.0141900 1.0339000 3.6569000 0.0000000 0.0000000 0.0181260 0.0169850 -0.0291750 -0.0651790 -0.1780300 3.6569000 0.3395000 0.3395000 0.3395000 -0.0626180 -0.0479360 -0.5065000 0.0026357 0.0157270 0.0171240 -0.4650400 0.0189430 0.0189430 -0.5392600 -0.4780700 -0.5361200 0.0069435 0.0108260 0.0107030 -0.5113500 -0.4875400 -0.0205490 -0.0453720 -0.5224600 -0.5224600 0.0141900 -0.5746700 -0.4991300 -0.5172200 0.0000000 -0.0067813 -0.0067813 -0.4900800 -0.0100410 0.0133530 -0.0291750 -0.0305400 -0.5806800 -0.1118200 0.0879690 -0.1741100 0.3395000 -0.5332700 -0.0099565 -0.0820040 -0.0820040 0.000 -0.522 0.000 -0.499 0.000 0.000 -0.472 0.000 0.000 0.000 0.000 -0.516 0.000 0.000 0.000 0.339 0.339 0.000 0.627 -0.492 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 -0.465 -0.465 0.000 0.000 -0.477 -0.477 0.000 0.000 0.000 0.000 -0.511 -0.511 0.000 0.000 0.000 -0.522 0.000 -0.499 0.000 0.000 -0.472 0.000 0.000 0.000 0.000 -0.516 0.000 0.000 0.000 0.339 0.339 0.000 0.627 -0.492 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 -0.465 -0.465 0.000 0.000 -0.477 -0.477 0.000 0.000 0.000 0.000 -0.511 -0.511 0.000 0.000 8.2943758 2.0973748 5.5568156 9.7094133 10.9276818 6.7316069 10.4861827 9.6934300 9.5477390 -1.3621579 12.3924210 11.6977956 1.4453029 0.9598443 2.8858867 8.4028228 5.3658710 12.6622250 11.4234035 10.8543937 8.5906922 1.4453029 8.0850342 9.9105808 7.6519716 4.1925414 4.3658745 0.2229282 10.4184907 4.8078752 7.6986470 7.6209448 4.8277733 9.5957785 10.2809052 4.0302654 8.9553637 -0.3619725 8.2836093 12.8200349 8.0238131 7.5021372 0.6379348 2.0973748 8.2545000 NA 2.2229282 NA 7.3068364 4.2558935 4.2818095 10.2925870 3.0302654 7.7775026 10.4282994 9.9783575 6.0642168 10.0808945 14.1633189 9.2219740 7.2745757 5.1298023 10.8431333 3.2229127 NA 0.2229282 0.6379348 13.8668737 7.6037354 8.6561513 12.1452501 10.0173293 10.6470798 12.8095187 11.1583242 12.2024578 10.6141570 13.2066197 9.9012202 9.2294733 10.5709038 0.9598443 9.6066179 11.0099998 11.366084 11.910872 6.192539 12.919154 8.742550 7.470841 8.531252 8.819103 10.239397 7.461318 6.671374 11.259087 6.767234 3.807880 10.786745 5.746477 8.627644 12.385515 10.396174 10.696281 7.574589 8.559792 10.617376 7.355628 10.638810 9.260918 10.708072 9.159551 10.252661 10.075183 10.293034 10.749739 8.892980 3.847406 9.379671 8.240928 11.376254 7.419311 11.565359 9.255418 11.082448 10.562763 6.932571 13.244588 10.649528 10.060016 13.139975 10.879338 2.445303 NA 9.628764 10.172740 9.335787 TCGA-AO-A03L 34 0 NA 2442 breast stage iiia t3 n2 m0 female 2003 NA yes infiltrating ductal carcinoma 4 asian not hispanic or latino 1 2 1 2 4 3 2 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 5.548757e-07 6.935946e-08 15.7894736842105 15.7894736842105 0 36.8421052631579 31.5789473684211 9.92428461 10.25736533 11.66605442 9.07962291 8.83620787 9.88091827 9.92526632 9.85693653 9.98956736 14.18466695 10.56762996 10.92330215 2.40367675 13.49671202 3.21102777 9.31505783 7.24286922 8.55087066 9.39518772 12.81702939 -0.59640505 13.49170876 3.98863016 9.73434196 10.88974670 6.09715356 -0.01144255 10.86155974 11.02800445 -0.59640505 7.22703345 7.23655576 NA 4.33440380 10.27634079 10.73206039 10.50235596 10.84271757 9.48248389 10.98298181 2.92723278 10.08534352 14.87542049 8.31019559 10.99120670 11.72672067 10.64415912 5.17185132 6.39801853 9.30226741 12.01238277 -0.01144255 11.47764009 8.75791532 5.55341273 4.33440380 10.15018024 12.30424972 9.82099105 11.95897401 12.92041241 7.63248489 10.56227563 9.51307873 11.37017137 10.96136895 4.91146150 11.34214286 10.00450799 -0.01144255 10.16188907 9.21182577 3.44894059 4.77870797 9.58046247 9.81676496 10.70058207 9.64505331 2.57359266 5.13158537 12.76608922 11.77421712 9.44258485 9.53359294 0.3458300 0.3290900 -0.4969400 0.3052100 0.0020805 0.2926200 0.2651400 -0.4859600 0.0127950 0.0127950 0.0127950 0.0238470 0.0238470 0.2744200 0.9711100 -0.4922500 1.7756000 0.2571500 -0.5109400 0.2709600 0.9444000 0.2263800 0.8402100 0.6213300 0.1629500 -0.5249100 0.1779900 0.2621600 -0.4214500 -0.3436600 -0.0536490 -0.4893200 -0.0257280 0.0379240 0.2926200 0.2790000 -0.1252500 0.2970800 -0.5014200 -0.3476700 -0.4029600 0.0127950 -0.4800800 -0.4800800 -0.1061800 -0.1061800 0.0238470 0.0238470 0.2744200 0.2185300 -0.4922500 -0.4922500 -0.5063400 0.2571500 0.2571500 -0.4750100 0.2709600 0.2709600 -0.1105100 -0.5024900 0.2557400 -0.5461300 -0.4117900 0.1629500 -0.5249100 0.2123800 -0.0630320 -0.5170200 -0.5284900 0.000 0.000 0.274 -0.218 0.257 0.257 -0.475 0.271 -0.111 0.258 -0.486 0.256 0.256 -0.394 -0.394 0.163 -0.362 -0.341 0.000 0.246 0.246 -0.493 -0.528 -0.105 -0.105 -0.157 0.305 0.000 0.000 0.293 0.293 0.261 0.000 -0.358 -0.358 0.000 0.000 -0.480 -0.106 0.000 0.000 0.000 0.000 0.274 -0.218 0.257 0.257 -0.475 0.271 -0.111 0.258 -0.486 0.256 0.256 -0.394 -0.394 0.163 -0.362 -0.341 0.000 0.246 0.246 -0.493 -0.528 -0.105 -0.105 -0.157 0.305 0.000 0.000 0.293 0.293 0.261 0.000 -0.358 -0.358 0.000 0.000 -0.480 -0.106 0.000 0.000 9.1718503 NA 4.3809441 10.4082375 12.4491696 6.3140385 10.9262474 8.7144945 8.0111814 0.7256103 11.3703516 11.5042855 5.7959825 0.4037040 2.4036767 8.5393752 3.8299307 10.7199475 11.8662960 10.4582702 9.3809459 7.2647532 8.4232567 9.8098708 6.6082371 3.3578616 4.7959851 NA 10.7965200 5.9272280 6.3225285 7.2045663 4.8466086 10.2527700 10.2029476 2.9272328 9.0072922 NA 6.8753414 12.1591794 7.3432452 6.7743535 0.7256103 0.4037040 7.9961232 -1.5964050 4.8130577 -1.5964050 5.8045441 5.1083990 3.6515913 10.8894952 0.9886302 8.4603035 10.8809182 10.1320116 4.6890699 10.3384625 13.1987924 8.0778582 2.2110122 4.1850260 10.5348798 4.0475209 -1.5964050 0.9886302 0.4037040 13.573475 5.532950 8.269399 13.496712 10.033478 11.050225 12.817029 12.577811 8.452153 10.840117 12.956815 10.795983 9.302267 10.127327 3.211028 7.827832 11.705876 11.1876872 13.1799961 6.5483241 13.4504472 8.3766455 6.5380927 8.8548771 8.7819606 10.8885744 6.7028736 10.1447115 10.5676300 6.9114603 2.7255885 10.6005754 5.6704523 7.5738410 10.7924904 10.0988942 11.2487639 7.9330963 10.0888528 12.2226475 6.1718493 10.6937107 10.5023560 11.1535353 10.1535353 10.3395676 9.7295336 11.1522781 10.5345581 8.8995210 NA 9.0569319 7.2920437 12.0123828 7.2142375 11.4776401 6.4535143 10.1489200 10.1501802 7.3344029 13.5930272 10.2977257 10.0760913 11.6700133 11.0355250 0.7256103 3.9372314 10.3873721 10.4432704 8.8763567 TCGA-AO-A03M 29 0 NA 1866 breast stage i t1c n0 (i-) m0 female 2006 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 4 3 5 2 1 4 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.824154e-05 5.999593e-06 5.29986052998605 85.4951185495118 2.51046025104602 5.02092050209205 1.67364016736402 9.5330947 9.7963894 12.5575429 9.1041112 8.8736385 9.2556239 10.7472106 10.6962961 9.7469862 15.1524493 10.3030923 11.1341017 0.9037324 13.7601637 3.1838517 9.6799362 7.0300734 8.5362142 8.5173962 13.0870191 NA 13.8929299 3.7110984 9.5231616 10.8491820 8.0963831 3.1407787 10.0542107 11.0802675 0.4183519 8.0822252 7.1048115 NA 5.8972840 9.9636620 10.2797084 9.5289250 11.2486681 9.7929162 12.2116708 4.9911998 10.7905235 14.8293456 7.4802821 10.5771709 11.0478501 11.1492909 3.9543638 NA 9.1041112 11.4837275 -0.9037381 10.9790263 5.9543638 7.1651613 4.4714216 10.8283386 12.0165500 9.8695224 11.6819326 12.6824020 7.3537714 11.1035858 9.9153368 10.9531978 11.2076819 4.8777442 11.9674221 10.1668397 1.0963968 10.9465700 8.9410890 3.3765960 5.4539356 9.1691857 9.9125669 10.0917971 9.5200244 0.4183519 6.5517098 12.7778413 11.9732838 10.4760324 9.3466817 0.0000000 0.0000000 -0.4504900 0.0286220 0.0033299 0.2071700 0.8408100 0.0192230 -0.0031859 -0.0031859 0.4463000 -0.2187400 -0.2187400 -0.2282200 -0.2198500 -0.2198500 -0.0494650 0.0161460 0.0066653 0.0066653 -0.4587100 -0.4630200 0.0144700 -0.0024938 -0.4363700 0.0804560 0.4321000 3.6569000 -0.0239450 0.0000000 -0.1955000 -0.4429700 0.0033299 0.0033299 -0.2068500 -0.2068500 1.5677000 0.0192230 0.4425700 0.0076392 0.7137000 -0.0957800 0.0030522 0.0030522 0.0030522 0.0012904 -0.2187400 -0.2187400 -0.2282200 -0.2198500 -0.2198500 -0.2198500 0.0161460 0.0161460 0.0161460 0.0066653 0.0066653 0.0066653 -0.4551600 -0.0048461 -0.4630200 -0.4309400 0.0024969 -0.4363700 0.0804560 1.1921000 -0.1599700 -0.0143390 -0.0186280 -0.219 -0.219 -0.220 -0.220 0.000 0.000 0.000 0.000 -0.451 0.000 0.000 -0.449 0.000 -0.479 0.000 -0.436 0.000 0.000 0.000 3.657 1.137 0.000 0.000 -0.195 -0.195 -0.443 0.000 0.000 0.000 0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.219 -0.219 -0.220 -0.220 0.000 0.000 0.000 0.000 -0.451 0.000 0.000 -0.449 0.000 -0.479 0.000 -0.436 0.000 0.000 0.000 3.657 1.137 0.000 0.000 -0.195 -0.195 -0.443 0.000 0.000 0.000 0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.5078945 NA 4.9165626 10.5401038 12.7141376 7.8765618 10.5616945 9.1985821 8.8063373 3.9037421 11.5678044 12.1550625 6.2762919 -0.9037381 1.7968054 8.3990219 3.8777442 11.5017907 11.2229264 10.2572001 9.5506825 1.6813593 8.3119163 10.0013941 7.9245198 4.7110929 2.3443172 -0.9037381 10.1215228 6.4714232 9.0152464 8.4929880 8.8554391 9.9620779 10.0025222 3.9037421 8.9268984 1.2663368 6.7863807 12.4548284 5.8378499 6.4228133 NA 4.1838438 7.8546066 2.9543638 1.7968054 -0.3186857 7.1215232 3.0580047 3.4183114 10.9432448 4.3631711 9.6061583 10.6294696 10.1980307 6.3910047 10.8502267 15.2322829 9.4166196 6.3631693 4.5558162 10.4849388 3.2663068 -1.9034683 -1.9034683 3.8777442 12.615712 7.132557 8.524743 13.760164 10.027239 10.277535 13.087019 11.203273 9.000265 10.635057 13.012962 10.650972 9.104111 9.465981 2.418298 7.235935 12.920845 11.4109665 13.1520470 5.9543638 13.0361415 8.9045431 7.1838458 9.7284697 8.1930985 10.7106306 7.3276047 9.8475089 10.3030923 6.7220916 0.9037324 10.4725086 6.7863807 8.9366103 11.0516699 10.8002868 10.6343296 8.8818356 9.6056634 10.8174824 7.9101642 10.2541186 9.5289250 10.7659327 10.1904609 11.7826649 10.1128433 11.0352277 10.8327851 9.6865025 NA 9.3147285 7.3600280 11.4837275 8.3525917 10.9790263 5.8174826 11.3167616 10.8283386 6.8445765 13.6884314 11.0738421 10.2045809 12.5557508 11.0302583 5.9418739 0.6813143 10.7373060 9.9930941 9.2880593 TCGA-AO-A03N 59 0 NA 2031 breast stage iib t2 n1a m0 female 2006 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 1 2 2 1 2 2 2 2 6 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.288862e-06 9.710324e-07 16.4948453608247 61.8556701030928 3.09278350515464 13.4020618556701 5.15463917525773 9.776953 8.660377 10.823940 6.956362 8.996519 10.388567 9.007790 10.573444 9.924750 13.284313 11.069936 10.711680 6.944680 11.870024 2.809517 8.950533 5.660378 8.469771 10.865578 13.527136 2.002162 14.315793 6.259553 10.629700 10.458520 8.447180 4.287568 6.932903 11.769523 NA 7.278290 7.068255 NA 3.909053 8.400909 10.731362 9.778599 10.042455 9.245340 10.803066 11.051334 9.685160 14.177481 5.726270 9.577705 11.017929 10.317881 2.702613 NA 7.780243 10.819549 1.587125 9.998639 5.428431 3.324091 3.002162 10.416851 11.870602 10.306517 11.723692 12.515030 8.292184 10.501513 9.663053 11.266315 10.117860 3.002162 11.676137 9.174593 2.324091 10.163298 8.663944 5.268951 3.250098 11.476886 9.548095 8.806297 9.706069 4.089625 9.569171 13.021061 12.487618 9.972991 10.377748 0.9061300 0.9428200 0.0098669 0.0000000 -0.4017400 0.0062481 0.3372300 -0.1094000 0.0291840 0.0683780 0.0656560 -0.4801800 0.5581500 -0.0229740 -0.0229740 -0.0229740 0.4208300 0.4174700 -0.4488900 1.5076000 -0.0756120 -0.2860000 -0.2860000 -0.2860000 -0.1771400 -0.1771400 -0.1658600 0.6124400 -0.4638700 -0.4499700 0.0655130 0.0098669 -0.4017400 -0.3957500 0.0062481 -0.0084385 0.7383400 -0.1094000 -0.1059200 0.7227300 0.2623200 -0.4194800 -0.1555400 -0.1555400 -0.1555400 -0.1570700 -0.7204800 -0.9655200 -0.0229740 -0.0229740 -0.0094046 -0.0094046 0.4208300 0.4174700 0.4174700 -0.4488900 -0.4901600 0.4866400 -0.0450930 -0.4617400 -0.2860000 -0.2860000 -0.4521100 -0.1694200 -0.1771400 0.5971300 0.3934600 -0.2115600 -0.4657900 -0.449 -0.449 0.000 0.000 0.421 0.421 -0.449 0.566 0.000 0.840 -0.462 -0.286 -0.286 -0.461 -0.461 -0.177 -0.177 -0.454 -0.454 0.612 0.612 0.393 -0.466 0.000 0.000 0.000 0.000 -0.402 -0.402 0.000 0.000 0.738 -0.109 0.723 0.723 -0.419 0.000 -0.156 -0.156 0.223 0.058 -0.449 -0.449 0.000 0.000 0.421 0.421 -0.449 0.566 0.000 0.840 -0.462 -0.286 -0.286 -0.461 -0.461 -0.177 -0.177 -0.454 -0.454 0.612 0.612 0.393 -0.466 0.000 0.000 0.000 0.000 -0.402 -0.402 0.000 0.000 0.738 -0.109 0.723 0.723 -0.419 0.000 -0.156 -0.156 0.223 0.058 10.105453504 0.002162421 7.110690010 10.133379602 11.140437481 6.678333933 11.011994252 5.005319137 9.796581532 NA 12.351032109 11.507481048 2.809517343 NA 2.702613220 7.498021039 4.131449554 10.326908733 11.250389738 10.395556092 9.854695125 2.587124922 8.350893669 9.632432727 6.436793147 5.250093725 2.002162421 NA 10.503505269 5.324094117 8.126286831 7.786800207 6.131449554 9.794142411 9.974427497 1.587124922 7.068254837 -0.997693533 6.921029230 11.799624565 6.525727509 9.544230152 0.002162421 2.002162421 8.043824580 NA 4.359717939 0.002162421 2.461607135 4.359717939 NA 10.548095466 NA 5.287568334 10.545680871 9.816748166 3.702602139 10.153816480 11.242062490 5.525727509 4.587130924 4.211619680 9.447180574 4.616875205 NA 3.909053017 3.525730640 12.237939 5.730086 8.926978 11.870024 9.776953 11.364109 13.527136 9.730937 8.609496 10.385330 13.163613 7.110690 7.780243 8.498021 NA 7.245340 11.150007 10.5480955 13.2193661 6.4778991 12.8005362 8.8878621 4.1720874 8.8709882 8.1544506 10.6490034 4.4615940 6.6886657 11.0699361 7.7503586 2.4616071 10.7851639 4.8848079 6.1878331 9.8748406 10.1113433 11.5529125 7.1211066 9.3139140 6.5871279 3.0896337 12.5085464 9.7785987 11.8880527 10.5153997 9.7562180 9.4273816 9.9187915 9.7008704 6.8909087 NA 8.7519179 8.4574929 10.8195491 1.0021624 9.9986392 8.5432623 9.3048047 10.4168509 7.8969832 13.5749251 10.2583744 11.0876381 12.3872192 10.7065016 0.5871729 3.0896337 10.4320955 9.5710719 8.6657239 TCGA-AO-A03O 69 1 2483 NA breast stage iia t2 n0 (i-) m0 female 2002 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 2 1 NA 1 2 7 2 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 1.629947e-06 2.427581e-07 27.7777777777778 11.1111111111111 0 35.1851851851852 25.9259259259259 9.9190455 10.0055510 11.8735986 9.0322684 8.1511663 9.0490162 10.1747949 9.3563606 9.1958960 13.3939524 11.0534695 10.8623058 3.6120104 12.5362896 3.6626385 7.8814682 4.0525811 8.1107140 10.8950957 12.9849501 1.9745660 13.7244934 4.2309177 9.2818338 12.0759695 6.1796922 NA 9.1533805 10.6552300 0.3895668 9.6587415 5.7115417 -1.1952856 3.9339314 10.2884682 9.8284067 9.6665148 10.0000247 10.3500996 11.3389553 6.9390784 10.9377946 14.8025375 8.0059675 9.8947649 11.4184419 10.7416583 3.1265765 0.8046318 9.9638931 11.8225047 -0.1952856 10.4294479 5.1445033 6.1175351 5.2803848 10.0929417 12.2160310 10.4138311 11.1129915 12.7797839 8.1015687 10.9566202 10.0836825 11.2161634 11.4668757 4.7588468 12.1730224 11.9800460 NA 10.3539557 10.0460397 2.9022666 4.8921141 10.9486733 9.7175417 9.6634104 11.0590906 9.2824106 8.6103963 12.3628339 10.4902772 10.4376476 9.5085560 0.80223000 0.89989000 -0.01505400 0.42452000 3.03820000 0.44465000 -0.01063100 3.65690000 0.91582000 0.86433000 2.77930000 0.59350000 0.36280000 -0.05334100 3.65690000 -0.48470000 0.90130000 3.65690000 -0.51620000 0.29596000 -0.00277070 -0.13549000 0.03481800 0.02932500 -0.07040200 1.28460000 0.32929000 1.70460000 0.00152550 -0.00636680 0.00402430 -0.01505400 0.00777830 1.10160000 -0.01904000 -0.01904000 -0.00027724 0.24803000 0.42654000 -0.05231200 -0.01519100 -0.99458000 -0.48838000 -0.01670400 -0.50090000 -0.51651000 0.33545000 0.24887000 -0.05334100 -0.03435900 -0.97466000 -0.98266000 -0.48932000 -0.13316000 -0.10644000 -0.48932000 0.32979000 0.29995000 -0.00277070 -0.47469000 -0.13549000 0.03481800 -0.01092200 -0.07361000 0.36608000 -0.04726000 -0.04685400 0.60413000 -0.00304750 0.593 0.404 0.000 0.000 -0.428 0.000 -0.508 0.300 0.000 0.908 -0.057 -0.135 0.000 -0.481 0.000 0.366 0.366 0.000 0.800 0.000 0.401 0.380 0.000 0.000 0.000 0.415 0.415 0.000 0.000 0.439 0.439 0.379 0.379 0.000 0.000 -0.518 1.893 0.000 -0.459 0.134 0.134 0.593 0.404 0.000 0.000 -0.428 0.000 -0.508 0.300 0.000 0.908 -0.057 -0.135 0.000 -0.481 0.000 0.366 0.366 0.000 0.800 0.000 0.401 0.380 0.000 0.000 0.000 0.415 0.415 0.000 0.000 0.439 0.439 0.379 0.379 0.000 0.000 -0.518 1.893 0.000 -0.459 0.134 0.134 7.6872952 6.0807770 5.0141053 10.6754024 11.4446713 5.8898848 11.2599796 8.6996672 8.1709746 2.1265765 11.5649565 11.8664607 2.6119986 2.2640860 2.7115390 8.0478263 3.3896081 11.3476842 10.9451627 10.6876775 9.8907887 3.5595408 7.9720705 9.8179751 6.3668957 4.6872959 NA NA 9.4753087 8.4321861 5.0525811 7.4911532 6.4981392 10.1881570 10.7246330 2.9745844 9.3544372 NA 5.3896150 12.1040035 7.4770774 5.3438129 NA 9.6493582 8.3476843 NA 1.8046318 6.8974099 6.3745074 5.5922926 3.2640860 11.9302273 -0.1952856 7.3896150 10.1942837 9.8734307 5.9645234 10.3462330 14.8937511 8.4358294 5.0525811 3.5595408 10.2640840 1.9745660 0.3895668 NA 2.2640860 12.898971 7.525752 9.177517 12.536290 9.838764 10.821461 12.984950 12.309347 8.556196 11.635710 13.003865 11.159177 9.963893 9.165499 NA 7.320352 11.447155 10.998486 11.839795 5.954399 12.832209 8.930066 6.747167 9.273276 9.405494 10.124104 6.484133 4.162202 11.053469 5.328215 1.126576 10.541054 4.892114 7.939053 10.627223 10.189436 10.965469 9.241364 7.972071 12.868974 6.886801 11.707039 9.666515 10.934257 9.942284 11.458617 8.541054 11.193746 10.143946 8.222505 7.900049 8.834602 9.474237 11.822505 6.933935 10.429448 5.404566 9.611202 10.092942 7.300507 13.455984 10.530445 9.152274 12.524469 10.940041 3.974575 6.599199 11.200722 10.385382 8.863997 TCGA-AO-A03P 54 1 2911 NA breast stage iib t2 n1 m0 female 2003 2576 yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 1 1 1 NA 2 2 1 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 3.81477e-07 21.6216216216216 16.2162162162162 5.40540540540541 40.5405405405405 16.2162162162162 10.010955606 9.573647566 11.715483729 8.522163275 9.337917323 8.846971189 10.855576548 10.240931660 9.325206273 13.623892027 12.411122033 11.180569283 0.002594517 12.931908645 4.002522510 6.913419624 4.118002497 8.714480795 8.766292691 13.541604943 2.665483733 14.754315043 NA 9.654062954 11.199948406 6.089989587 0.739502506 8.345342259 9.753512948 0.739502506 7.541685967 7.211980741 NA 4.925358606 10.001587359 9.867229001 9.845924676 10.909918353 9.843304909 11.248871660 5.046923175 11.705276810 14.420555200 7.973572246 9.522163275 11.153966351 11.077114391 4.775119039 -0.582512001 8.664305053 9.834889576 1.002522510 10.692815983 3.972150393 4.224920075 3.417569010 10.263838301 12.591709894 11.091315179 11.251837951 12.631883539 7.592489927 12.144314765 12.193233342 11.109744025 10.925359051 4.646381580 11.794774952 12.451675585 0.002594517 10.143782547 9.234548023 3.401698723 4.300204279 11.556955893 10.424591685 10.848278342 10.114966375 5.917410272 5.211981714 11.625798780 10.698045234 10.334936482 9.280201698 0.4672400 0.4636500 0.0745050 -0.2374100 -0.0098185 -0.0631660 0.0297470 0.0143300 -0.7712400 0.0718220 0.4818000 0.0036076 3.6569000 -0.1072300 0.3904800 -0.7397600 0.1713600 0.1713600 -0.0861200 0.4314200 3.6569000 -0.1808100 0.4067700 0.4067700 0.2722200 -0.2375300 1.9020000 3.6569000 -0.3178600 -0.3650200 -0.3123700 0.0745050 0.0000000 -0.4308300 0.0130740 0.0109820 0.0297470 0.0143300 0.0143300 0.0171240 0.0297470 -1.2617000 -0.0069195 0.0059700 0.0059700 0.0298100 -0.7561600 1.0559000 -0.1072300 -0.0323140 -0.7577100 -0.7577100 0.1713600 0.1713600 0.1713600 -0.0654470 -0.3587400 -0.3587400 -0.5242000 -0.3498500 -0.2002500 0.4067700 1.4805000 -0.6841500 -0.6264000 0.8295500 -0.3917100 -0.7200400 -0.7664900 0.000 0.000 -0.107 -0.740 0.171 0.171 0.000 0.431 0.000 0.000 -0.350 -0.181 0.226 2.439 2.559 -0.626 -0.626 -0.347 -0.347 0.515 -0.323 -0.392 -0.720 -0.326 -0.326 -0.241 -0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.771 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 -0.107 -0.740 0.171 0.171 0.000 0.431 0.000 0.000 -0.350 -0.181 0.226 2.439 2.559 -0.626 -0.626 -0.347 -0.347 0.515 -0.323 -0.392 -0.720 -0.326 -0.326 -0.241 -0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.771 -0.361 0.000 0.000 0.000 0.000 8.881088870 NA 5.597474562 10.078451727 11.596229271 8.479232583 11.396453601 8.366340576 8.182436069 NA 11.243119524 10.117366742 5.300207940 4.032277201 1.417542007 8.859471114 3.324450605 9.611705581 11.825363259 10.940391126 9.794232431 6.104064032 8.081122286 9.499047800 6.237743432 3.876998174 0.002594517 NA 10.209947989 6.250453813 6.541685192 7.939164857 5.702967767 9.587946430 10.747921144 3.061413318 9.906910733 NA 7.423189041 12.466221591 7.599958948 8.185748628 -1.582512001 4.775119039 8.833306311 NA 3.909417906 1.224904644 3.739491704 2.883542619 1.876998174 10.948702167 1.739502506 7.709886121 10.894816778 10.177036513 4.198926269 8.799107387 12.655446578 7.709886121 3.417569010 3.876998174 12.588897631 4.987420923 NA 0.002594517 2.417569010 14.931647 5.461957 9.129231 12.931909 10.544527 11.197079 13.541605 18.078561 8.228136 10.806120 12.495131 11.786480 8.664305 9.104940 2.002523 8.455111 12.485335 10.790429 11.537478 6.775116 12.990257 9.031354 4.118002 10.030433 9.499714 11.059427 5.324454 10.013754 12.411122 6.306308 -0.582512 10.007216 6.814170 7.640045 9.593738 10.067270 10.763524 9.931637 9.743994 10.348671 5.198922 11.160369 9.845925 10.837788 9.893298 12.438544 9.754629 10.490367 10.695433 8.669047 -1.582512 8.389280 6.724948 9.834890 5.287930 10.692816 5.809883 10.315032 10.263838 7.209053 14.524373 10.702678 9.874945 12.233948 9.857395 1.417542 1.224905 10.212792 9.852193 9.291009 TCGA-AO-A03R 57 0 NA 2091 breast stage iib t2 n1a m0 female 2005 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 2 2 5 NA NA NA 3 4 2 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.976338e-07 4.161568e-07 28.5714285714286 14.2857142857143 2.85714285714286 31.4285714285714 22.8571428571429 10.1804156 9.2405705 11.4489044 6.8350562 8.5593102 8.5745500 9.8888784 9.5896307 11.2373821 13.1442727 10.7769527 10.4101415 0.4171639 10.7598334 2.7391352 9.5795945 6.8684139 8.1586703 8.0574481 12.2199215 0.4171639 14.3250796 5.3479420 10.1862145 11.1241308 9.0392549 2.5871249 8.7413837 10.7306531 4.4172044 6.7570526 6.9407646 -0.5827281 4.1720874 8.0355887 9.3464617 9.1019518 9.2293805 8.0282282 10.1586701 3.4172044 9.6290914 14.7299089 5.8735155 9.8570341 10.8180826 9.6544132 4.3713986 1.0021624 7.9130581 11.6384882 NA 11.3074675 5.4395699 5.0610590 2.8766250 9.4492489 12.0803165 10.1878671 11.3086072 12.6076452 6.9640971 10.6921636 10.1870410 10.9936875 10.9832572 3.0021624 11.1446983 12.3620982 NA 10.6478241 10.2309844 3.7398481 5.2500937 10.5701217 9.0520142 10.1072011 11.4097875 2.7391352 9.2500933 12.3939463 12.2130399 9.6686856 9.4058879 0.59458000 0.57416000 0.02216400 0.00263570 -0.00138580 -0.00581400 0.00944910 -0.62941000 2.73940000 2.23100000 2.20060000 0.01419000 0.01419000 -0.00138580 -0.00138580 -0.00138580 -0.64246000 -0.00097017 -0.61987000 0.01279500 0.02496900 -0.60960000 0.03115500 0.53960000 0.02482900 0.02482900 0.02104300 0.01670500 0.01126100 0.01126100 0.00000000 0.00485790 -0.00138580 -0.00138580 -0.00429290 -0.00429290 0.00944910 -0.62941000 -0.62941000 0.00221930 -0.00011004 -0.62655000 0.00903120 0.00903120 0.00903120 0.00903120 0.01419000 0.01419000 -0.00138580 -0.00138580 -0.00138580 -0.00138580 -0.62093000 -0.00097017 -0.00097017 -0.61987000 0.01279500 0.01279500 0.00083195 -0.60989000 -0.60960000 0.03115500 0.00944910 0.02482900 0.02482900 -0.62417000 -0.60555000 0.03947800 0.03947800 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 0.000 0.000 0.000 -0.610 -0.604 0.000 0.000 0.000 0.000 0.000 0.574 0.574 0.000 0.000 -0.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 1.574 2.201 0.000 0.000 -0.228 -0.228 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 0.000 0.000 0.000 -0.610 -0.604 0.000 0.000 0.000 0.000 0.000 0.574 0.574 0.000 0.000 -0.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 1.574 2.201 0.000 0.000 -0.228 -0.228 9.3786529 NA 5.4832934 10.7408209 11.5930645 8.5432105 10.3180699 9.1668716 10.0596520 1.0021624 11.3829875 11.4536756 3.2245651 NA 3.2245651 6.8009077 3.8766348 10.3786528 11.5240932 10.2883384 9.7503585 0.4171639 8.7503586 10.5516294 7.3597179 7.2181031 NA NA 10.2445459 5.1985609 9.1348796 8.3772049 5.7026049 10.0437974 10.0745216 3.9407681 8.9130581 -0.5827281 6.5257275 13.0027526 8.1176431 8.5921288 1.4172179 0.4171639 9.0059178 -0.5827281 4.0021624 -0.5827281 7.0096607 6.0319134 2.7391352 10.1870410 NA 8.4886656 10.1502185 9.8827696 6.0610590 10.3233421 11.8345283 8.0574481 3.3240905 4.4172044 12.1779231 0.4171639 1.0021624 -0.5827281 2.0021624 13.355978 4.971792 8.754825 10.759833 9.665131 11.356415 12.219921 11.857813 8.655608 9.302900 13.245042 12.352000 7.913058 9.156984 1.002162 7.262693 10.931917 10.9490719 12.5074810 5.5257275 13.9838471 8.2998463 9.6710506 8.9407652 8.3538411 10.0408378 6.5669506 5.7570526 10.7769527 7.8888784 2.0021624 10.1829037 5.7391325 7.7051001 9.9269782 10.4602304 10.0124607 10.4492488 10.4595466 7.9870588 6.1853869 11.9670456 9.1019518 10.7758544 10.4023336 10.0556391 9.3523681 9.6107285 10.5618614 8.0096601 -0.5827281 8.6944906 8.7346158 11.6384882 7.7072218 11.3074675 4.0021624 11.3240938 9.4492489 7.2051061 14.6026981 10.7954981 10.9095571 11.8526130 10.6162620 5.5046649 0.4171639 10.2373821 9.2116190 9.6745909 TCGA-AO-A03T 42 0 NA 2124 breast stage iib t2 n1a m0 female 2007 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 1 2 1 NA NA NA 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.803346e-06 6.242351e-07 6.94444444444444 22.2222222222222 11.1111111111111 30.5555555555556 29.1666666666667 9.5151353 9.2859681 10.8388871 6.5482100 9.4154547 8.8605941 9.1619489 10.4838769 10.4257384 14.1468964 10.0786484 10.5708216 2.4998586 12.2936719 3.1278809 8.6178443 7.6661239 8.1515509 8.9711527 12.4098763 1.0404015 13.2513910 5.3072026 10.3200259 10.5901999 9.0148298 NA 11.0025775 9.6102710 4.1278809 8.5969214 7.3668450 NA 3.5639757 8.0119590 9.5049610 8.2277675 11.2767285 7.9473061 10.0669387 6.4666793 10.1964984 14.5293538 7.3214646 11.5732582 9.6752263 10.1218987 5.7953020 7.5120902 7.8348313 11.1088577 NA 10.2871559 8.1437031 5.1065033 4.8733063 9.8348311 11.7453996 10.3211860 11.5008712 12.0715996 9.2847792 10.7334666 10.2296222 10.9766851 10.1748416 2.3623296 11.1873021 11.6180801 -0.9595985 10.4587950 8.6914668 4.2498700 3.9473015 10.0820745 9.9184661 10.7797740 9.9996928 3.2103421 7.7852491 11.1825224 11.7214340 9.6281929 9.7827247 0.0070826 -0.1226500 -0.5546700 0.0087528 0.0073609 0.0000000 -0.1162600 -0.5541700 -0.0162920 -0.0162920 2.4370000 -0.4624900 -0.5629600 -0.0142280 -0.0142280 -0.5624600 -0.4543600 -0.0048623 0.0037465 0.0153080 1.0298000 -0.0263040 -0.0263040 0.5640100 -0.0336770 -0.0336770 -0.0336770 1.0224000 -0.0113350 0.0070826 -0.5808800 -0.5546700 0.0073609 0.5618700 0.0000000 0.0066653 -0.1162600 -0.5541700 -0.5729600 0.5243300 0.0273570 -0.0162920 -0.0254830 -0.0254830 -0.0254830 -0.0320410 -0.5629600 -0.5629600 -0.5729900 -0.0142280 -0.5624600 -0.5624600 -0.4543600 -0.0048623 -0.0048623 -0.5468300 -0.5634600 -0.5634600 -0.0040162 -0.0238540 -0.5795000 -0.0263040 0.0141900 -0.0336770 -0.0336770 -0.0208240 -0.0069195 -0.0187650 -0.0187650 0.000 0.000 0.000 -0.548 -0.450 0.000 0.000 0.000 0.000 0.000 0.000 -0.553 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.022 0.000 0.000 0.000 0.000 -0.555 0.000 0.000 0.000 0.000 0.000 -0.554 -0.554 0.000 0.000 1.275 1.275 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 -0.450 0.000 0.000 0.000 0.000 0.000 0.000 -0.553 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.022 0.000 0.000 0.000 0.000 -0.555 0.000 0.000 0.000 0.000 0.000 -0.554 -0.554 0.000 0.000 1.275 1.275 0.000 0.000 0.000 0.000 9.71813486 NA 5.34419647 10.01195890 11.89956179 8.13789437 10.02269585 8.28251765 10.18884102 -0.95959848 11.42222858 12.53886937 10.39796731 5.01769480 2.62538740 7.66246686 4.87330630 11.90266521 11.43165889 9.89216437 9.87093043 -0.95959848 7.96225634 10.12056656 6.57957390 6.93523342 -0.95959848 -0.95959848 9.70397346 4.84777147 7.53226864 8.76492930 7.59500380 11.12061989 9.80445745 3.79529941 8.09569766 2.49985864 6.57179663 12.65028658 9.21908016 8.89372472 NA 6.04041467 8.77343068 -0.95959848 4.39796721 0.04040152 5.43273230 3.36234364 3.12788086 10.69281215 0.04040152 8.22032415 10.79905492 9.58730967 5.53226708 10.12123277 12.65443491 7.32118582 3.43273230 3.56397567 10.20154712 7.46668014 NA 5.23024145 3.04041905 13.136459 6.159357 8.950308 12.293672 10.469299 10.246209 12.409876 13.063910 7.979994 9.269234 12.432330 10.683370 7.834831 8.020555 1.362330 7.117231 10.333312 10.74258801 11.67363760 6.32581812 13.59889221 8.75637718 6.07383737 8.68246690 8.03759472 8.75917082 6.08480839 6.33503656 10.07864839 7.69146717 NA 9.25108659 8.59883600 8.26258208 10.01841066 10.59596308 10.16453665 8.89216422 10.14435871 8.21034016 6.22032415 12.52312244 8.22776754 10.55414293 10.51716150 10.42735559 7.83807691 10.19713042 10.35952282 6.84777022 -0.95959848 8.94969338 6.24986815 11.10885771 6.02909946 10.28715585 4.76833785 11.01016155 9.83483113 7.64032810 14.14571000 10.83076379 9.87725468 11.92744547 10.39301048 5.30720263 0.04040152 9.83807675 8.31187816 9.30251007 TCGA-AO-A03U 31 1 1793 NA breast stage i t1c n0 (i-) m0 female 2001 NA no other, specify 0 white not hispanic or latino 2 3 3 3 6 1 5 5 5 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-08 3.467973e-08 0 33.3333333333333 0 0 66.6666666666667 10.4903603 9.8986491 11.2899120 10.1193274 8.1824420 9.3251712 9.5110228 10.2305053 11.7754644 13.3802576 10.1287955 10.3624348 1.2876496 11.9847005 4.1702696 12.7202315 5.1824420 9.6544928 5.3750881 6.2418211 -0.7124095 10.6216182 4.5730291 9.4656107 9.3141477 4.0155422 NA 13.0864100 8.0475128 3.0949792 9.1556751 10.0404230 -0.7124095 4.1205178 9.6274742 9.8484348 9.8645810 10.5919757 9.9915279 11.4119072 2.9880666 5.1078050 15.3233255 7.5752216 8.9050918 11.4311670 11.3170841 3.1456122 NA 9.6106790 13.1758919 0.2875905 11.6012160 6.1141733 8.7904560 5.1824420 11.0524959 11.3925506 10.0541532 12.0627202 12.5402158 7.7138889 10.9371050 10.7770735 10.7969045 11.1909414 4.6970176 11.0117118 7.3590863 -1.7121731 10.3836805 8.8772755 2.5544169 5.9169805 10.3849981 10.4055921 9.8796140 9.7154610 1.4575418 8.1687383 12.7893993 13.5869039 9.7017810 9.5649118 0.01265500 0.01265500 -0.00249380 -0.00249380 -0.01098300 0.00069327 -0.00401620 -0.00401620 -0.00290910 -0.00290910 -0.00408330 -0.10972000 -0.10972000 0.00069327 0.00069327 0.00069327 0.00027728 0.00027728 0.27316000 0.00000000 0.01056400 0.00763920 0.00763920 0.00763920 0.01098200 0.01098200 0.00876500 0.01223700 0.01265500 0.01265500 -0.00253300 -0.00249380 0.00152550 -0.01098300 0.00069327 0.00069327 -0.00401620 -0.00401620 -0.00401620 0.00332990 0.00180300 -0.00290910 -0.03163200 -0.03163200 -0.03163200 -0.03163200 -0.10972000 -0.10972000 0.00069327 0.00069327 -0.00152430 -0.00152430 0.00027728 0.00638710 0.00638710 0.27316000 0.00000000 0.00000000 0.01056400 0.01405100 0.00763920 0.00763920 -0.00263220 0.01098200 0.00876500 0.01223700 -0.00290910 -0.01546600 -0.01546600 -0.110 -0.110 0.000 0.000 0.000 0.000 0.273 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.273 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.2505201 NA 4.3320204 10.4544151 11.6359375 6.1202607 10.3374728 9.7618931 8.6556395 1.4575418 13.6353149 12.0370266 2.0949792 NA 2.9314751 7.9404692 5.6539457 11.6606254 11.6299768 10.1113896 8.5140366 0.6095659 7.6385633 10.3813720 6.4724991 11.2392733 -0.1273682 -1.7121731 11.5334741 4.9023341 6.4013659 8.2049966 11.7262862 9.4580627 10.0189433 8.0458476 8.4749762 -1.7121731 9.2027569 13.1038580 8.1424926 6.9242484 2.2876200 0.6095659 8.1220955 NA 3.7138937 NA 4.8725875 2.9924965 7.6885035 10.1717948 4.9023341 12.1175452 10.7562484 9.5942557 5.0018698 9.9525160 11.9433787 8.8527264 1.4575418 4.3099910 10.4020174 2.5355553 1.2876496 3.3320204 4.6626613 11.7089002 5.0949792 8.7232947 11.9847005 10.7714401 10.2187312 6.2418211 11.2174375 8.9839313 10.7577341 12.7795400 10.6460008 9.6106790 7.7012524 -0.1273682 7.4600520 10.6103975 10.9536264 12.2492549 7.2242622 14.5874394 8.5152402 5.7222529 8.3333839 7.6863682 9.7026636 9.1338982 5.9458347 10.1287955 6.9206196 0.2875905 10.8981879 9.7480803 7.0019047 12.0774636 10.9682036 10.6238520 8.5284158 8.4181950 12.3237979 5.7874690 10.2073518 9.8645810 10.3134559 9.5736044 11.6777933 10.9185739 10.3790597 10.3800511 9.4091578 NA 9.6383150 8.1731069 13.1758919 4.4970758 11.6012160 7.3044326 11.5686850 11.0524959 6.9314810 14.2280962 9.9997214 10.3367922 13.0358172 9.4316451 0.6095659 NA 10.1915061 10.5334741 9.2257336 TCGA-AO-A03V 41 0 NA 1351 breast stage i t1c n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 4 NA NA NA 1 4 5 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456549e-06 2.427581e-07 16 36 2 30 16 10.3490752 9.9145316 11.9216951 9.5397670 7.3842122 9.8968369 10.7051242 10.2093578 9.3086066 14.6060377 11.7634077 10.9857303 1.4568587 12.3959121 2.8194229 9.5428044 6.8638220 7.8118942 14.1320586 13.1210510 0.9714424 12.8709388 6.0332071 8.8796313 11.1968793 7.2494159 -1.3503386 8.5443204 9.8393273 2.6495005 7.3706020 7.4664860 -0.3505225 3.5074775 10.2865804 10.5148494 8.1413556 11.3757209 10.2752116 11.2890695 5.5198690 9.7176093 14.3333472 8.3015410 10.1302929 11.0150050 10.2335257 3.9349033 5.2193583 8.9406733 11.4983213 -1.3503386 10.5835621 4.4823901 4.3499455 3.9349033 9.9854513 11.9542819 10.4043902 12.0482464 12.8191929 7.3324976 11.8757644 9.8783215 11.3710292 11.5631402 5.3360048 12.1214319 12.5834700 4.0757636 10.3786986 9.3740166 4.2077679 3.8589557 10.7223053 11.1081657 9.9068906 9.5912839 2.4568587 9.4776393 12.2574109 12.6269616 10.0950350 10.0663003 -0.00097017 -0.00263220 0.04528200 0.01507400 0.65875000 -0.78218000 0.00027728 0.00972760 -0.61959000 -0.61959000 0.34655000 0.82657000 2.91430000 -0.00940460 0.00235810 0.00235810 0.01349200 0.00133740 -0.75072000 -0.00193990 2.12070000 -0.72146000 -0.70181000 -0.72170000 0.03326700 0.03326700 3.64590000 3.65690000 -0.00110870 0.06365200 -0.71737000 0.04528200 -0.00207840 -0.70190000 0.00319100 0.00319100 0.00027728 0.00027728 0.00444110 0.00152550 -0.02394300 -0.07654500 -0.72341000 -0.72341000 -0.03095000 -0.66217000 -0.53906000 -0.51063000 0.65866000 0.00235810 -0.73955000 -0.75262000 -0.00290910 0.00166420 0.00166420 -0.00981850 -0.00193990 -0.00193990 -0.65901000 -0.75582000 -0.75020000 -0.70181000 0.00041593 0.03326700 -0.68174000 1.29160000 -0.01050800 0.01866300 -0.00415460 0.304 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.643 0.000 -0.721 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 1.292 0.621 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.158 -0.635 0.000 0.000 0.000 0.304 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.643 0.000 -0.721 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 1.292 0.621 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 0.158 -0.635 0.000 0.000 0.000 8.6051528 NA 5.7890536 10.0380582 10.6149263 6.3348829 10.9267902 8.6711769 7.9319655 1.9714424 11.2012110 10.5091967 6.3219281 4.5074839 4.0757636 8.0136376 5.2494150 9.6856763 11.4857504 9.9209658 7.8879072 2.2344707 7.7839294 9.7787858 6.2788601 6.6938967 6.6829258 NA 11.2335257 8.5890818 7.6438562 8.0332071 7.5043709 10.6965107 10.2996570 3.1730635 10.1577927 -1.3503386 7.2269314 12.5908255 8.8017876 7.7580273 -1.3503386 1.4568587 7.4696817 4.8393298 3.9714332 0.2345013 4.2933558 2.9728764 2.9714240 10.6763720 1.8194229 7.8879072 10.8150379 9.9366379 5.1089342 9.2400898 12.3367691 7.0715675 1.9714424 4.9893525 11.7869743 6.1171090 -1.3503386 3.5074775 2.8974341 13.166048 5.809373 8.946419 12.395912 11.523908 10.492246 13.121051 14.364312 9.386260 10.827234 12.807244 11.030775 8.940673 9.134326 1.971442 6.513688 12.916875 10.617089 12.858042 8.024542 14.146946 9.769741 5.682924 9.458467 7.287360 9.713322 5.404389 8.813152 11.763408 5.075768 2.736973 10.958126 5.704786 5.756039 9.946992 9.628928 10.820054 7.571344 9.342990 10.478036 5.934906 11.447316 8.141356 10.481997 9.430042 11.248951 9.671871 10.981819 9.775562 8.789054 1.819423 8.745954 6.098900 11.498321 5.819428 10.583562 5.704786 10.275668 9.985451 7.629642 14.008908 11.061278 9.718281 12.094000 11.123716 2.234471 NA 10.392233 10.324578 8.633921 TCGA-AO-A0J2 41 0 NA 997 breast stage ia t1c n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 1 NA 1 1 2 6 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.28315e-06 6.935946e-07 12.280701754386 8.7719298245614 5.26315789473684 42.1052631578947 31.5789473684211 8.6065869 9.1392904 10.9743913 8.3333929 8.9847742 9.8029842 9.4109255 10.2551601 11.0467155 13.6203953 9.3580331 10.3438689 0.7736588 13.1101106 2.8325863 10.2791778 6.7960643 8.0467153 7.6044761 12.4425081 NA 11.6571040 7.7811918 9.3597298 10.5410538 9.9622858 5.0342245 11.6308992 11.8048238 NA 8.7623817 7.4054802 NA 5.5016175 9.8167243 10.2006605 8.7821258 10.5416055 9.0690832 9.4301219 9.7713470 9.2262814 14.6078553 7.1789805 8.8891742 9.8112440 9.0389215 2.3586494 0.7736588 8.0263624 9.7881824 -0.8112193 7.9402784 4.1194724 5.9029804 4.9569209 7.4671841 11.9841654 9.6097474 11.0212290 12.1864432 8.4993472 10.1411118 9.3202829 11.0969394 10.9128220 3.5462895 11.2112757 9.3238024 0.1887807 10.3292447 9.2900536 2.1896348 4.2548208 11.6507254 9.8379907 10.5553300 9.3479752 -0.2263412 9.6254460 12.5844025 12.7679915 10.0827944 9.5664874 0.426880 0.688120 -0.062764 -0.167900 0.400110 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0.000 0.000 0.389 0.000 0.000 0.000 -0.526 -0.526 0.382 0.382 0.000 0.000 0.000 0.401 -0.535 -0.187 0.000 0.000 -0.268 0.301 8.4566916 -1.8114725 8.1194719 9.5890803 12.8279056 6.4134113 10.4063893 7.3396746 8.8610450 NA 11.7327329 11.7771974 4.5462895 -0.8112193 0.1887807 7.5572408 4.6805888 12.3763185 11.9456035 10.0587138 10.2314199 2.7122876 10.7739318 9.2242210 6.1487369 10.0717596 6.7122959 -1.8114725 10.4115294 2.8325863 7.1224253 9.0978775 8.9259819 9.7335638 9.6050042 2.5810620 8.8208210 -1.8114725 8.7699350 12.6007088 8.0835522 8.0590994 -0.8112193 3.9166582 8.5072773 5.1075958 1.5106582 -0.2263412 5.3076762 4.5122838 1.5106582 12.4082812 0.5106582 9.0342245 10.6634545 9.3902459 5.3076762 12.1202107 13.8782957 7.3810272 3.9700898 4.6149984 9.5324753 1.5106582 -1.8114725 0.9960995 3.6150042 12.1145133 8.0529207 9.1436577 13.1101106 9.9498702 11.9473741 12.4425081 6.8926375 8.2628761 10.1109472 12.9007778 11.0103092 8.0263624 7.8943667 0.1887807 7.5528689 11.9706064 11.6079046 12.9820838 4.7122986 14.3371700 9.8690941 6.4079033 7.8995412 4.3384815 9.7070730 6.6925597 6.8397858 9.3580331 10.3070267 0.9960995 9.2913664 9.2255950 9.9570430 11.8527373 10.8391131 10.9111151 7.9901840 9.4467116 8.3548977 5.3884065 9.1818639 8.7821258 9.8280752 10.4865106 8.9502858 8.9098337 10.8464995 11.0496275 8.4103216 -1.8114725 10.2207147 7.7781238 9.7881824 5.2221593 7.9402784 7.1283140 9.7720430 7.4671841 7.9960893 14.1752654 10.9855853 11.0793788 11.9743913 10.7017218 1.8891620 -0.8112193 9.8121589 9.5621434 9.5010502 TCGA-AO-A0J3 67 0 NA 651 breast stage iib t2 n1b m0 female 2009 NA yes other, specify 1 white not hispanic or latino 1 1 1 NA 2 2 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.629947e-06 5.895554e-07 26.1538461538462 27.6923076923077 4.61538461538462 32.3076923076923 9.23076923076923 10.536789315 10.063568464 11.500628446 8.439217115 8.130652412 8.663526084 9.566167280 9.628631447 7.308513781 13.409315816 12.363761865 10.837178815 0.576086724 11.699645887 2.849078522 6.229505250 6.755971788 9.578409490 7.879844198 14.212234770 -0.008827391 15.253975624 -2.008682243 9.869431444 10.337614544 6.434044360 0.313013609 10.307806568 10.779819142 NA 6.870684050 4.434041023 NA 3.239031363 9.428852992 9.383418317 10.002328129 9.216308376 8.945297218 11.257594567 4.078567141 9.773689634 13.729984749 8.593975926 9.709205497 10.983862209 10.450532473 3.772455785 8.785516550 8.727502897 9.680225182 -2.008682243 10.650427824 9.142751658 3.348657345 3.576062531 9.837374690 12.045959468 9.921838111 10.718383119 12.770255884 9.834236692 11.021940351 10.459470350 11.197352108 10.604199600 3.921836178 11.246424536 12.843045023 -1.008972553 10.838745471 8.921838260 3.038120075 2.849078522 10.493186772 9.708348833 9.647525703 9.985100622 0.991100030 4.909965067 10.126168718 9.166650428 10.057526494 9.848304323 0.8976800 0.0181650 -0.5648500 -0.0053992 0.5250300 0.2549600 0.0484040 -0.5732800 3.6569000 1.1180000 0.5900900 1.1396000 0.0582240 0.3088900 2.6012000 -0.5355100 0.0448570 0.5788400 0.0310140 0.5865000 0.0665150 -0.5117700 -0.4952700 2.5284000 -0.4736300 -0.4736300 -0.4736300 -0.0369460 -0.4796500 -0.5560700 -0.5269600 -0.5648500 -0.5633600 1.0293000 -0.0037395 -0.0213730 0.0484040 -0.5732800 -0.5699200 0.4051100 0.6417600 -1.2083000 -0.5589700 -0.5589700 -0.5435100 0.0957780 0.0582240 0.0582240 0.3088900 -0.4909900 -0.5510600 -0.5510600 0.0448570 0.0525250 0.0525250 -0.5763400 0.0610790 0.0610790 0.0665150 -0.5278800 -0.5117700 -0.4952700 0.0385880 -0.4736300 -0.4736300 -0.0369460 -0.1924900 -0.4453400 -0.4453400 1.080 1.080 0.309 -0.227 0.000 0.000 -0.576 0.000 0.000 0.000 -0.528 -0.495 -0.495 0.000 0.000 -0.474 -0.474 0.000 0.000 0.000 0.000 -0.192 -0.445 -0.530 -0.530 -0.559 0.000 -0.587 0.525 0.255 0.000 0.000 -0.573 0.363 0.000 -1.208 0.590 0.000 -0.544 -0.113 -0.113 1.080 1.080 0.309 -0.227 0.000 0.000 -0.576 0.000 0.000 0.000 -0.528 -0.495 -0.495 0.000 0.000 -0.474 -0.474 0.000 0.000 0.000 0.000 -0.192 -0.445 -0.530 -0.530 -0.559 0.000 -0.587 0.525 0.255 0.000 0.000 -0.573 0.363 0.000 -1.208 0.590 0.000 -0.544 -0.113 -0.113 9.279966858 NA 4.861464129 11.254516747 11.965605055 6.786004265 12.155850658 8.148649949 10.113550358 0.313013609 10.627725471 12.069507702 4.313028125 NA 3.897995464 8.279967090 4.078567141 9.978009388 11.403935255 10.468100118 9.831878824 2.383413996 8.566640133 10.291167360 5.442313216 0.798423845 -1.008972553 NA 10.605580633 6.785516550 10.247014625 6.506800265 3.161033096 10.570034795 10.056180315 2.239031363 8.326491059 NA 4.257885628 11.731408645 9.140212692 7.873743694 NA -2.008682243 8.525403744 0.313013609 3.276496666 1.161049225 2.798465321 4.980125865 -0.008827391 9.289736272 -1.008972553 7.161026039 10.701046233 9.852575544 3.514665142 7.083857968 11.983685175 6.906980761 4.294878022 1.798465321 12.845920521 6.974094465 NA 0.576086724 -0.423913276 17.096048 6.210270 9.469365 11.699646 9.905112 11.150341 14.212235 13.431451 8.483515 10.443085 12.724487 10.184626 8.727503 8.174736 -2.008682 8.754313 11.258180 10.9831540 12.1702324 8.2306992 14.1382642 8.2971625 3.6349533 10.7081345 8.1522326 10.8751969 4.4505316 4.5146651 12.3637619 6.6915411 NA 10.3428683 2.6915342 6.6545873 7.5166219 10.3242562 11.3242562 8.6975970 10.6978126 10.6712406 2.1610170 11.4893405 10.0023281 10.4497638 10.0798890 11.2238215 7.6564370 10.7781871 10.7623839 8.5656943 -0.4239133 8.9999425 4.0996234 9.6802252 2.5760625 10.6504278 3.8979955 11.8633909 9.8373747 7.0272746 13.1447716 10.3967742 9.6181786 10.9445698 9.8533507 0.5760867 NA 10.4627761 9.6945719 9.8897021 TCGA-AO-A0J4 41 0 NA 1587 breast stage ia t1c n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 3 4 NA NA NA 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.942065e-06 6.242351e-07 16 40 0 28 16 10.2253513 9.5556116 11.7350623 10.4212569 8.3790738 8.9874121 9.8066224 10.4444043 12.7726531 13.5009206 10.4998098 10.7133214 0.3500446 11.9457864 2.9350259 9.5453118 4.3679860 8.4627628 9.1766113 3.8861111 -1.9719967 8.0725287 9.3330563 9.0180471 11.1170884 7.8876697 2.0281448 10.2730930 11.1190740 1.7285736 9.1320781 8.2855224 -0.9719967 5.5595163 8.6996755 10.5872726 8.9559126 10.0036243 10.0118408 11.1154317 2.1155993 7.4977768 16.6492600 8.2703561 10.4161465 11.1011046 10.8944476 4.4543997 -0.9719967 9.8123604 10.2145585 -1.9719967 10.7851078 7.1854810 7.0393622 6.1366590 10.0790036 11.8677321 9.5219900 11.8588479 13.1128600 7.9721148 10.8800788 10.5935176 11.6967980 12.0246081 5.1049488 12.2804304 10.0491145 4.8861160 9.7696017 10.1603130 3.4557415 5.5119519 11.5904963 10.0632774 10.7106903 10.9303212 2.7285736 5.6428431 12.7624738 11.3941836 10.0677391 9.5531660 1.3980000 1.0458000 0.3015400 0.3164300 0.7975900 -0.3045100 0.1082000 0.7398600 -0.6120100 -0.6120100 2.9509000 -0.0069195 -0.1132500 -0.0209610 0.0394030 0.0394030 0.2212900 -0.4135500 -0.2119300 -0.1589900 0.6855200 -0.3995900 -0.3936800 0.2369000 0.2477800 0.2477800 -0.3582900 0.0846430 0.0871000 0.0871000 0.2471600 -0.3880600 -0.2604700 -0.4073800 -0.3934400 -0.3934400 0.0070826 0.2260700 -0.0381700 -0.4124000 0.0842090 -0.7376600 0.2872300 -0.4092600 -0.1030300 -0.1030300 -0.1132500 -0.3012600 -0.4026300 0.0394030 -0.2788800 -0.2616700 0.2212900 -0.4017400 -0.3798800 -0.2254100 -0.1332100 -0.1610300 0.0000000 0.6044900 -0.3995900 0.3249500 -0.4365900 -0.3657800 0.2477800 0.1913200 0.4412200 0.0843540 0.6293400 0.000 0.000 0.000 0.000 -0.181 -0.402 -0.176 -0.159 0.000 0.000 0.000 -0.400 -0.163 -0.287 -0.129 -0.111 -0.111 0.000 0.000 0.191 0.191 -0.139 0.000 0.000 0.000 0.290 0.290 -0.397 -0.397 -0.393 -0.393 0.000 0.000 0.000 0.388 -0.738 0.712 -0.409 -0.103 -0.104 0.175 0.000 0.000 0.000 0.000 -0.181 -0.402 -0.176 -0.159 0.000 0.000 0.000 -0.400 -0.163 -0.287 -0.129 -0.111 -0.111 0.000 0.000 0.191 0.191 -0.139 0.000 0.000 0.000 0.290 0.290 -0.397 -0.397 -0.393 -0.393 0.000 0.000 0.000 0.388 -0.738 0.712 -0.409 -0.103 -0.104 0.175 7.83226534 NA 6.67559296 10.89560641 11.49140354 5.51918647 10.99337780 10.59322481 8.42826678 NA 12.03831302 11.52267774 5.44598818 NA 3.55170057 8.93276928 3.61309548 11.29521384 11.59585304 11.81389356 8.51697878 0.61306011 8.83790289 10.54555790 8.17151760 5.22780653 0.02814477 0.35004457 11.03288175 4.13665897 6.64651983 8.70585422 7.59609059 9.36270395 11.21362955 3.83548958 9.36742786 3.42045545 7.69701967 13.48910237 7.65201604 6.70409177 -1.97199672 3.88611113 7.76114962 2.83547948 3.07253460 -0.38684557 7.06430841 2.88612088 5.89232059 10.78197814 4.40317227 11.10778606 10.52872758 9.68723849 5.70761590 9.84791456 13.85805550 8.73030743 5.49573993 5.13665897 10.42259727 2.72857360 8.60933501 0.61306011 7.79300628 13.048588 7.499810 8.938777 11.945786 10.182636 10.838505 3.886111 13.171039 9.227194 11.541986 13.644683 11.716057 9.812360 8.196807 3.276065 8.531960 11.242606 10.618254 11.868814 5.762843 14.257760 8.927491 8.331915 7.622459 6.237589 10.090852 8.253342 6.390078 10.499810 2.835479 3.115599 10.386511 10.226580 10.143910 13.348477 10.762633 10.653387 8.090181 8.149668 9.906185 8.427946 10.451327 8.955913 9.938777 9.886116 12.525986 12.485772 11.459240 10.982331 9.701885 NA 9.528235 8.231813 10.214558 9.277248 10.785108 9.102276 10.370243 10.079004 8.508198 14.348565 10.469004 10.378245 12.776380 10.789478 8.095569 3.642840 10.531463 10.404531 9.646520 TCGA-AO-A0J5 48 1 792 NA breast stage iv t4 n1a m1 female 2008 735 yes other, specify 2 white not hispanic or latino 1 2 3 NA 4 3 6 4 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 3.467973e-07 12.8205128205128 15.3846153846154 0 48.7179487179487 23.0769230769231 9.855723 10.383549 11.863451 10.160703 7.281632 7.982273 11.393506 10.001339 10.962342 14.283013 10.573619 11.194058 2.920179 12.771405 3.750253 9.602000 5.657143 8.523940 10.401901 12.539717 NA 14.980234 0.165301 9.246226 10.700564 9.078926 1.335197 9.325160 9.303561 3.252749 8.811848 7.475901 -1.834956 6.101927 10.274793 10.408463 9.888950 11.079300 10.595218 11.803385 11.156279 10.420613 15.566977 9.170141 12.339824 12.018111 11.312335 5.632893 6.819925 9.704448 11.146321 -1.834956 11.317732 4.985469 6.330196 5.119485 10.265951 11.773775 10.870705 12.191466 12.831957 8.075182 11.288117 11.167198 10.555995 11.416919 5.374740 11.682958 12.097965 -0.834699 10.443157 9.129630 3.168899 5.487216 10.793507 10.012346 9.677041 9.897456 3.072174 7.250098 13.340058 11.719998 10.200432 9.676053 0.5640200 0.8404100 0.0012481 0.0043021 0.0087528 -0.1257700 0.0012481 -0.6326300 0.1767900 -0.1945000 0.0811770 0.0109820 0.0109820 -0.0526660 -0.0526660 -0.6237900 -0.0038779 -0.0038779 0.0000000 0.0075000 0.0044411 -0.0134020 -0.6328700 2.7338000 0.0715350 0.0715350 0.0715350 0.0590800 -0.3044000 0.0034687 -0.0087146 -0.6333900 0.0087528 0.0087528 -0.1257700 -0.1257700 0.0012481 -0.6229300 0.0029133 0.0000000 -0.0062856 -0.6378400 -0.3073300 -1.2431000 -0.3087400 -0.3087400 0.0109820 0.0109820 -0.0526660 -0.0526660 -0.6237900 -0.0510460 -0.0038779 -0.0038779 -0.0038779 0.0000000 0.0075000 0.0075000 0.0044411 -0.7303800 -0.0134020 -0.6328700 0.0100160 0.0801680 0.0715350 0.0590800 -0.0111980 -0.0109220 -0.0109220 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.561 0.561 -0.554 0.000 0.000 0.000 -0.302 0.561 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 -0.490 0.133 -0.309 -0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.561 0.561 -0.554 0.000 0.000 0.000 -0.302 0.561 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 -0.490 0.133 -0.309 -0.309 0.000 0.000 8.1973347 3.5576061 5.9790696 10.0807947 13.2604385 5.9497917 11.1032143 9.4899982 8.6449681 3.2527487 11.1010064 11.9171215 3.9726467 3.8932069 4.1876569 8.5693658 4.8234997 9.7222737 11.7663631 10.8021400 9.0945472 1.7502635 7.5162279 10.4747652 6.6123717 7.5468320 -0.2498223 NA 10.3923029 6.6165003 7.5316107 7.6061579 5.8657283 9.9664959 10.7220343 4.7652006 8.2881167 NA 7.8863880 12.8718388 7.4804380 7.9101228 -1.8349564 8.2124127 7.8795342 -1.8349564 5.8306255 -0.8346990 3.2527487 5.4690687 3.1194890 10.7802286 -0.8346990 8.2273348 10.2390956 9.7460184 5.0479309 9.6379797 11.5104168 8.8829652 -0.2498223 3.1194890 10.7227525 0.9726191 NA 0.4871776 1.7502635 12.333605 6.182096 8.479305 12.771405 10.588336 10.407272 12.539717 10.063512 8.509585 11.216479 13.258335 8.453001 9.704448 8.612372 0.165301 8.734195 12.402872 11.1642317 12.1913799 6.6571412 14.3027791 8.2474377 5.2945730 9.3544956 7.3501639 10.6209961 6.4827015 6.8199249 10.5736185 6.9564517 5.8234997 12.2802511 4.8234997 7.6732419 12.0532709 10.2903794 10.8405843 7.9433658 8.7679878 10.3910988 5.8019140 11.9515012 9.8889497 10.3026002 9.9629504 11.6692387 10.1143859 10.4576104 10.5145700 9.1361137 -1.8349564 9.0347439 7.6749253 11.1463208 5.8091443 11.3177321 9.2829318 10.3453502 10.2659511 7.5894549 13.6967592 9.7208366 9.9950116 12.4737700 10.8118475 -0.2498223 1.6247092 10.2777283 10.5381538 9.3631198 TCGA-AO-A0J6 61 0 NA 1140 breast stage iia t2 n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.496941e-06 5.895554e-07 7.86516853932584 21.3483146067416 4.49438202247191 44.9438202247191 21.3483146067416 9.28890897 8.73078259 10.29067448 9.26815037 9.14928401 8.33183910 7.80018096 9.96292680 11.89239907 13.43042185 9.56074934 10.26096386 0.61532212 11.99197350 2.35227830 11.55022487 4.50607506 10.21056299 9.15317098 5.23001467 NA 10.99287753 9.09036335 9.81997850 10.08698062 4.88832438 0.61532212 9.59687273 11.16043084 3.67420074 8.26516025 8.45660781 NA 2.73079210 9.34492612 9.42426960 9.97212425 9.61624447 8.42587719 10.26605810 0.03040671 5.25916324 14.48157016 7.99818873 10.78710567 10.96163447 10.79769978 3.75826053 -0.96973456 9.37685665 10.76208624 NA 8.73424660 4.68855525 6.92516037 3.70276835 9.76801275 11.74383689 10.68810796 10.92894431 12.49022278 8.35452357 10.86580131 10.37455005 9.79479988 9.80306991 3.88832438 12.43068875 8.55390494 0.35230655 10.38211040 10.17945494 1.92273067 3.93723138 8.24344726 8.86639339 10.97084007 10.19587808 0.03040671 4.09643054 13.16585185 11.67926223 9.54653548 9.27708348 0.65277000 0.02104300 0.48148000 1.10400000 0.00624810 0.13243000 -0.58853000 -0.62922000 -0.65501000 1.69440000 0.04188300 0.61643000 -0.07254100 0.00000000 -0.03275500 0.60088000 0.03495900 -0.00954260 -0.63510000 -0.63007000 -0.61479000 0.00777830 0.00777830 0.04287400 -0.01477800 -0.01406100 -0.01406100 0.00583090 -0.60051000 0.01950300 -0.40573000 -0.62503000 -0.62389000 -0.65873000 -0.63874000 -0.63874000 -0.58853000 -0.62903000 -0.60941000 1.52930000 -0.02041200 -0.65052000 -0.01574100 -1.29290000 0.00055459 -0.19081000 -1.02130000 -0.08890400 0.01014600 -0.03275500 -0.58735000 -0.61556000 0.03495900 0.58417000 -0.01601700 -0.63225000 -0.63083000 -0.63083000 -0.62508000 0.01852300 0.00777830 0.00777830 -0.63991000 -0.01147300 -0.01406100 -0.26444000 0.58829000 -0.60960000 0.48923000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 -0.631 -0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.274 -0.274 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 -0.624 0.947 0.947 -0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 -0.631 -0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.274 -0.274 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 -0.624 0.947 0.947 -0.623 0.000 0.000 0.000 0.000 0.000 8.15833703 5.68139585 5.06376609 10.28330405 11.69323381 5.97285805 10.21056299 8.48737500 7.81741285 NA 12.17157198 11.98175153 3.15962919 -1.96973456 1.93723138 8.87190739 3.45660905 11.87974807 11.46614342 10.70210514 8.38899411 1.93723138 8.22633030 9.91794442 5.08562436 8.63767327 4.53813460 -0.96973456 10.49156653 1.03033608 6.05271150 9.23918702 8.22633030 10.67931612 10.25253405 -0.96973456 9.64781042 6.18009016 9.15122868 12.62087153 7.20526836 9.44449956 0.61532212 0.61532212 8.25555030 -1.96973456 2.03033608 -0.96973456 6.11249164 3.20026893 4.94920807 11.89839381 3.31574011 10.50582306 10.56172441 10.49488868 5.28773085 9.45450926 13.74807292 7.12045563 2.67418944 4.09643054 10.49488868 0.03040671 0.35230655 0.35230655 6.25916136 12.159552 8.872693 8.830434 11.991974 9.163485 11.106992 5.230015 9.464450 9.672846 10.445821 13.394375 12.278789 9.376857 8.007623 -1.969735 7.756561 10.848126 10.4537215 10.8018324 6.6039898 14.3545054 9.3064673 7.4877235 9.1576925 9.5371464 9.6179143 7.8376979 2.8377011 9.5607493 3.1596292 0.8377011 9.5921083 8.3341235 10.1430301 12.3535385 10.9547843 10.0903633 8.1983630 9.4015750 7.9266755 5.4226602 10.0869298 9.9721243 9.6482695 10.1240907 5.2687488 9.6890007 10.6674206 10.6802727 7.8457265 NA 9.5162981 5.8441245 10.7620862 4.8376960 8.7342466 3.7852262 11.1193001 9.7680127 7.5181826 14.0406088 10.0373703 9.6260667 13.1174743 10.7546436 2.6741894 -1.9697346 10.1832616 9.2214022 9.2597626 TCGA-AO-A0J7 71 0 NA 618 breast stage iib t2 n1 m0 female 2009 NA yes other, specify 3 white not hispanic or latino 1 1 2 NA 2 2 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.040392e-07 25 31.25 0 18.75 25 9.7011994 9.7080091 11.4772808 9.0259792 8.5990019 8.4235714 10.4054051 8.8888717 10.1153059 13.4515062 8.4592320 10.8831398 5.1031451 12.9228603 2.6056366 9.1374874 6.3125998 7.2630184 10.4441097 13.4201355 0.1031283 14.3084056 5.3636757 10.4103857 11.2029331 6.9857896 -1.4819685 7.6980934 10.6647531 2.2186262 7.7445964 5.0573420 -0.4817670 2.6056366 10.2229527 10.4429970 10.6551755 9.9481142 9.3020012 10.3028193 4.2461040 12.1945823 14.2678706 5.7102802 9.5467812 11.6647531 10.8162470 5.9939189 4.4954649 8.9528126 11.2840920 -0.4817670 9.9688802 3.6056484 3.6056484 4.9105024 10.4198056 12.7138642 9.9893515 10.9719695 12.9006734 8.4280775 10.4239475 10.1252974 10.8347488 10.4843293 5.1906109 11.5302851 10.8505007 NA 10.3154407 9.3846907 3.7276373 3.4723838 11.3939338 10.5195926 10.8096430 9.8139533 -0.4817670 6.1475408 12.3714940 10.3275506 10.5058037 8.8602592 0.423010 0.423010 0.449180 0.451780 -0.543810 0.435130 -0.561070 -0.561070 0.444600 0.444600 0.444600 0.000000 0.012934 -0.553870 -0.556070 -0.556070 0.234730 0.221530 0.216680 0.433280 -0.551660 0.373800 0.373800 0.373800 0.320930 0.320930 0.320930 0.197710 -0.562390 -0.542290 -0.049559 0.440230 -0.543810 -0.543810 0.435130 0.435130 -0.561070 -0.561070 -0.561070 -0.559870 -0.559980 0.444600 0.451390 0.451390 0.420230 0.420230 0.012934 0.012934 -0.553870 -0.553870 -0.556070 -0.556070 0.234730 0.221530 0.221530 0.216680 0.433280 0.433280 -0.551660 -0.553390 0.373800 0.373800 -0.301690 0.282950 0.320930 0.213300 -0.552860 -0.309210 -0.309210 0.000 0.000 -0.554 -0.554 0.235 0.235 0.217 0.433 -0.552 0.392 -0.157 0.374 0.374 -0.302 -0.302 0.321 0.321 -0.119 0.423 0.213 0.213 -0.553 -0.309 0.000 0.000 0.440 0.440 -0.544 -0.544 0.435 0.435 -0.561 -0.561 -0.560 -0.560 0.445 0.445 0.420 0.420 0.000 0.000 0.000 0.000 -0.554 -0.554 0.235 0.235 0.217 0.433 -0.552 0.392 -0.157 0.374 0.374 -0.302 -0.302 0.321 0.321 -0.119 0.423 0.213 0.213 -0.553 -0.309 0.000 0.000 0.440 0.440 -0.544 -0.544 0.435 0.435 -0.561 -0.561 -0.560 -0.560 0.445 0.445 0.420 0.420 0.000 0.000 8.0708535 NA 5.3636757 10.7367477 11.6767941 7.5093665 11.0259790 7.9529584 8.8876291 -0.4817670 11.1395495 10.7567265 6.0727725 7.5349930 1.1031283 8.5829270 3.8401107 8.2896740 11.1761727 10.8253852 9.9449733 4.1620408 8.7433918 10.1844084 4.7470006 1.8401208 0.1031283 NA 9.9528127 5.0417468 4.6056484 7.8173924 3.7276373 10.4127635 10.4661865 1.1031283 9.6214722 -1.4819685 6.3573884 12.5929113 8.6526109 5.9939189 NA NA 7.6345287 NA 2.9105024 NA 2.1031619 6.2084626 0.1031283 11.0813807 1.1031283 6.0338833 9.7036794 10.1054932 5.6980934 10.1937004 11.1618152 6.6526113 3.3255447 1.8401208 10.4351835 6.6830915 NA NA NA 11.581977 5.884508 8.179962 12.922860 10.606310 11.015288 13.420135 12.569818 8.557103 10.576514 13.158994 12.362596 8.952813 9.200301 -1.481969 8.132895 10.837857 11.161815 12.075887 7.775572 12.664024 8.307718 3.688113 9.717243 9.776161 11.105498 4.647470 8.486851 8.459232 5.010037 1.688091 11.532554 6.794309 8.107817 9.374610 10.680890 10.884507 9.675531 8.322315 12.503315 3.325545 11.175324 10.655176 11.737655 9.546090 11.365046 9.064114 9.975565 11.039049 8.165643 NA 8.263859 5.626708 11.284092 2.977610 9.968880 5.858033 10.840958 10.419806 6.948637 14.047005 10.358569 9.869124 12.331264 10.396619 NA 3.803589 9.798375 9.653252 9.695604 TCGA-AO-A0J8 61 0 NA 680 breast stage iia t2 n0 (i+) m0 female 2009 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 1 1 3 NA 4 3 4 1 6 6 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 18.1818181818182 22.7272727272727 4.54545454545455 36.3636363636364 18.1818181818182 10.218815 9.606605 12.172982 9.396369 8.422939 9.950250 10.765568 9.383981 9.332214 8.495833 10.992905 10.431077 1.462419 13.319861 1.703411 9.147637 7.994501 7.973084 10.296163 13.300253 2.587941 14.154847 7.360530 10.027772 10.869098 9.899311 NA 10.954992 8.319260 2.172903 7.462411 7.150184 13.892388 3.617686 10.180087 9.710338 10.465736 11.152249 9.577099 11.206938 -1.997117 10.353365 14.403541 7.742152 10.169769 11.639943 11.149547 4.897797 5.478713 8.186614 11.551198 -1.997117 11.099694 5.192802 6.283750 5.202653 10.364374 11.810535 11.025867 11.444885 12.905071 8.943292 10.941272 10.668257 11.264780 10.918671 5.306758 12.022656 9.983832 -1.997117 10.356125 9.136121 2.508226 5.526541 11.204490 9.905354 10.199888 9.465481 2.172903 10.758909 13.704177 12.357917 10.742970 9.663420 1.36710000 1.36710000 0.00055459 0.00055459 0.00249690 0.00555290 -0.77005000 -0.76201000 0.00147470 0.00147470 -0.00526100 0.00555290 0.00555290 -0.03358900 -0.03358900 -0.03358900 -0.00470790 -0.00470790 0.00527490 -0.00110870 -0.00138580 -0.00263220 -0.00263220 -0.00263220 -0.00332430 -0.00332430 -0.00401620 -0.00636680 0.00083195 -0.00055444 -0.01092200 0.00055459 0.00249690 0.00249690 0.00555290 0.00000000 -0.77005000 -0.76201000 -0.77336000 0.00152550 0.00152550 0.00147470 0.00277450 0.00277450 0.00277450 0.00569190 0.00555290 0.00555290 -0.03358900 -0.03358900 -0.03358900 -0.02219500 -0.00470790 -0.00346270 -0.00346270 0.00186830 -0.00110870 -0.00110870 -0.00138580 -0.76227000 -0.00263220 -0.00263220 0.00360760 -0.00332430 -0.00401620 -0.00636680 0.00610900 -0.75469000 -0.75469000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.050 -0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.367 0.000 0.000 0.000 -0.755 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.762 -0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.050 -0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.367 0.000 0.000 0.000 -0.755 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.762 -0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9909532 NA 5.4208327 10.6979894 11.7584922 7.4687902 11.9036568 8.7596685 8.9332058 0.3249258 11.0073746 11.3384806 1.0029545 5.9687635 -0.4119630 8.6241148 4.0690663 10.8949522 11.5314327 11.5387400 9.6323353 3.2509010 8.3834395 10.5501142 6.2975986 6.0364022 1.5879410 NA 10.8445430 7.6103088 6.0253456 8.3215214 7.0225698 9.9512729 11.2929975 4.0253478 8.5785180 NA 6.9218421 12.1483536 7.5954358 7.4665031 -0.9971175 5.2509047 8.3249069 3.4292410 3.8358736 NA 5.3605293 5.5909433 2.7578767 10.6756250 -0.4119630 6.4376073 9.5328972 9.8179615 4.7034164 9.5479431 13.2329615 8.2209364 3.3249114 4.0473726 11.0295021 2.3953096 NA 3.9337143 1.5879410 13.069330 4.945495 8.423992 13.319861 10.575916 11.362591 13.300253 12.086209 9.347829 10.951528 13.627774 8.901580 8.186614 9.233600 -0.411963 7.322651 11.258007 10.9764966 11.8201622 7.7478123 14.2317400 8.9673194 5.8609603 9.2878026 8.1335491 10.3237933 7.0582613 7.3693007 10.9929053 7.0473726 3.2883881 10.8295271 6.2461534 6.3517061 11.5353346 10.5870016 11.1319396 8.5498732 8.5945012 12.3376011 5.2603682 11.1095939 10.4657365 10.8065044 10.3561254 10.3118864 8.9859723 10.2921329 10.9825824 9.0864579 -0.4119630 9.3720797 5.9859717 11.5511985 5.0253478 11.0996938 6.9831179 10.4130775 10.3643741 7.6771706 13.9552649 10.4184564 10.5479430 13.4352269 10.2278847 3.3249114 -0.9971175 10.6700902 10.7649453 9.4474759 TCGA-AO-A0J9 61 0 NA 1613 breast stage iiic t2 n3 m0 female 2007 NA yes infiltrating lobular carcinoma 15 white not hispanic or latino 2 2 2 NA 4 3 6 4 3 5 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-06 5.548757e-07 12.3456790123457 61.7283950617284 2.46913580246914 14.8148148148148 8.64197530864197 9.686096 9.492636 10.490188 7.717123 8.660204 9.562637 8.508846 10.160483 10.268204 9.270107 9.271058 10.392663 4.431021 11.515681 3.951028 10.512468 7.015985 8.696040 9.675364 12.681544 2.403540 13.792222 6.779918 10.705566 9.913774 4.317811 -1.296899 10.267237 9.972813 3.988503 7.214854 6.795859 9.524876 4.346957 7.719910 10.572696 9.556412 10.976315 9.011441 10.183892 3.790564 10.581536 15.034789 6.885148 9.527265 10.780586 10.582685 4.951028 -1.296899 8.581153 11.593556 NA 11.717471 6.339727 6.361314 6.697456 10.407006 12.520785 11.228868 11.460284 12.586700 8.457990 11.147599 10.422491 10.736525 10.484462 3.226663 11.416274 10.592226 1.510456 10.687521 7.983873 3.660552 4.969887 11.611870 10.125167 9.720606 9.055145 2.951028 6.927104 13.300282 12.006883 9.737901 10.413048 1.01050000 0.99987000 -0.00484610 -0.00484610 -0.01202400 0.66438000 -0.00622860 -0.00622860 -0.33595000 -0.33595000 -0.33595000 0.01000600 0.35871000 -0.32368000 -0.32368000 -0.32368000 0.63993000 0.63993000 -0.00097017 0.01642500 -0.25783000 0.04103400 0.04103400 0.04103400 0.04244900 0.03707600 0.03707600 0.39463000 -0.30228000 0.00232890 0.01070300 -0.00484610 0.02777800 -0.01202400 0.66438000 0.66438000 -0.00622860 -0.00622860 -0.00622860 0.00000000 0.00000000 -0.33595000 0.36070000 0.36070000 0.02701500 0.02701500 0.35871000 0.39147000 -0.33353000 -0.32368000 -0.32368000 -0.32955000 0.63993000 0.63993000 0.63993000 -0.00097017 0.01642500 0.01642500 -0.24496000 -0.32398000 0.04103400 0.04103400 0.00583090 0.04244900 0.03707600 0.39463000 0.01098200 -0.30944000 -0.30944000 0.349 0.349 -0.324 -0.324 0.640 0.640 0.000 0.000 -0.258 0.438 -0.307 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.998 0.395 0.395 0.000 -0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.664 0.664 0.000 0.000 0.000 0.000 -0.336 -0.336 0.334 0.000 0.000 0.000 0.349 0.349 -0.324 -0.324 0.640 0.640 0.000 0.000 -0.258 0.438 -0.307 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.998 0.395 0.395 0.000 -0.309 0.000 0.000 0.000 0.000 0.000 0.000 0.664 0.664 0.000 0.000 0.000 0.000 -0.336 -0.336 0.334 0.000 0.000 0.000 9.2528868 -1.2968993 8.4877372 11.2892382 10.8932355 7.3479322 10.6485460 10.0105250 9.4991417 2.7905635 12.7064444 12.3712691 3.3469569 5.0954181 3.5104556 8.2461339 4.4844604 10.9827127 10.9988710 10.6268010 9.6507391 4.0250288 8.5657396 10.6860957 7.5579706 11.2041929 1.2880632 NA 10.6814551 6.7420210 6.4712867 7.8272233 7.3965894 10.5840325 10.5933664 3.9510282 8.6917868 NA 8.3397267 12.9072147 8.8375286 9.7261633 2.1625323 1.5104556 8.8879776 2.9510282 5.3030135 -0.2968993 6.2880650 3.9885029 2.7905635 11.1293669 0.2880632 9.0781415 10.0534889 10.1884284 6.7583845 10.5023838 11.7812529 9.2441987 4.7474948 4.5104556 10.9101164 -0.2968993 NA NA 4.2266627 10.829600 5.941508 8.246134 11.515681 10.458407 11.177822 12.681544 10.102914 8.547023 10.273907 12.868637 9.833029 8.581153 9.914382 5.042951 6.857920 11.397460 11.036817 12.240806 7.965197 12.988641 8.965174 6.375528 9.255771 7.969889 10.244784 7.272958 8.732389 9.271058 7.047398 3.162532 10.422491 5.573465 7.569082 10.376853 10.830129 10.252405 8.190942 9.225684 9.828516 5.444568 12.204851 9.556412 11.189686 9.521684 10.675005 9.470459 10.303015 10.690721 7.639740 NA 8.836604 7.152788 11.593556 5.375526 11.717471 6.837528 10.595265 10.407006 7.389603 15.472927 10.346056 10.700987 12.228133 10.772216 4.129365 1.873026 9.698163 8.917421 9.871774 TCGA-AO-A0JA 36 0 NA 655 breast stage iiic t2 n3 m0 female 2009 NA no infiltrating ductal carcinoma 11 black or african american not hispanic or latino 2 2 2 2 NA NA 2 4 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 9.09090909090909 54.5454545454545 9.09090909090909 22.7272727272727 4.54545454545455 9.79884859 10.66440097 11.77796979 9.98927613 8.24779368 9.39122554 10.16725204 10.13409551 10.12043346 13.62378142 10.94939274 10.82126034 0.49794442 12.29761041 4.02148861 8.99177947 7.42570183 8.89773596 9.28582664 12.84215058 0.08283881 13.16708593 4.62720993 8.10525430 11.33811188 6.58007311 -1.50225991 11.81347130 9.88701753 3.19836842 8.78563653 7.56401303 0.08283881 4.90731372 10.43750325 11.05059311 9.79082074 11.82126034 10.42496123 11.85959372 13.77346660 11.44866220 15.06470650 9.56208746 10.23474033 11.29781274 11.23517142 4.66784672 4.83777172 9.33791509 13.68093905 NA 11.01288463 6.91155138 6.63234966 5.33081293 11.27866887 11.98513603 10.39425646 12.51751478 13.06558310 8.82097893 10.85904537 10.50553658 11.71815122 10.91313767 5.21216853 12.71011643 9.45792605 -1.50225991 10.31650624 8.45792584 3.62761851 6.75058909 10.75590112 10.42829181 9.69636912 9.56670234 1.81987252 9.83554596 13.60644850 11.53512779 10.33870196 9.58140341 0.62018000 0.59973000 0.03242200 0.00917050 0.00218610 0.00917050 0.00000000 0.00000000 0.66493000 0.66493000 0.01063900 0.00573370 -0.64790000 -0.66003000 0.01474900 -0.66040000 0.00221930 -0.01156300 -0.00013862 0.01782400 0.03522000 -0.63897000 -0.63897000 0.02707600 -0.00221680 -0.00221680 -0.00221680 0.03721700 -0.61383000 -0.65848000 -0.01037000 -0.65640000 -0.01188700 0.00218610 0.00917050 -0.00083160 0.00000000 0.00000000 0.00000000 0.00513590 0.00513590 0.66493000 -0.64959000 -0.65480000 0.01684500 0.02848100 -0.64790000 -0.64790000 0.01670500 0.01474900 -0.65892000 -0.65854000 0.00221930 0.00319100 0.00319100 -0.00013862 0.01782400 0.01698500 0.03397200 -0.63311000 -0.63897000 -0.63897000 -0.66633000 -0.00221680 -0.00221680 0.03721700 0.02848100 -0.62589000 -0.61777000 0.000 -0.648 -0.660 -0.660 0.000 0.000 0.000 0.000 0.000 0.000 -0.633 -0.639 0.000 -0.654 -0.654 0.000 0.000 -0.614 0.640 0.000 0.000 0.000 -0.618 0.000 0.000 -0.664 -0.664 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.666 -0.650 0.000 -0.169 -0.169 0.000 -0.648 -0.660 -0.660 0.000 0.000 0.000 0.000 0.000 0.000 -0.633 -0.639 0.000 -0.654 -0.654 0.000 0.000 -0.614 0.640 0.000 0.000 0.000 -0.618 0.000 0.000 -0.664 -0.664 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.001 -0.666 -0.650 0.000 -0.169 -0.169 8.3036680 1.8198725 5.4752049 9.7977045 11.3659749 6.5850151 11.3278449 9.0164197 8.8565752 2.3052702 11.5176885 11.2644675 3.4048214 3.3052847 2.7458612 8.0214858 3.2528092 10.1905396 10.9930296 10.6090597 8.2972056 6.5258293 7.0409560 9.6647148 7.4979237 7.3866670 2.3052702 NA 10.6549551 6.5640138 8.1363601 8.4078171 6.9073149 10.0272277 10.8232295 4.5423200 7.9367157 NA 8.0505931 11.7644178 7.8355458 7.3682891 -0.5020556 0.4979444 8.2410756 NA 4.8017071 -1.5022599 4.6678467 5.6307054 2.1983684 10.3659749 1.0829069 8.0076990 10.0692027 9.9262843 4.9897794 10.3953914 13.0928318 9.2300915 3.4979189 3.5423200 11.6974430 2.8198521 NA 1.4979444 1.4979444 13.0088736 5.3052775 8.7255401 12.2976104 10.5060024 10.6568492 12.8421506 12.0115283 8.6489407 10.8902039 13.5148629 9.2258444 9.3379151 8.0057189 -0.5020556 7.1236331 11.6358758 11.4600971 12.7431796 9.0534717 13.0712162 8.4360335 5.8377742 9.1870484 8.0772398 10.9958707 6.9532513 8.9241887 10.9493927 7.8039858 3.9897748 11.3562937 5.3682899 6.8087184 11.3428259 10.8783851 11.1395242 9.4145499 9.1236328 12.5667863 5.4637075 11.9720888 9.7908207 10.7018838 9.7494064 10.9545351 10.0639781 10.5730689 11.0854672 9.0116516 NA 9.1563407 7.3742257 13.6809390 6.7073771 11.0128846 8.0155935 10.2339030 11.2786689 7.0293060 12.7407260 9.4063166 10.1245457 12.4951917 10.8291210 0.8198317 2.1983684 10.3878082 10.6874398 9.4100648 TCGA-AO-A0JB 50 0 NA 1542 breast stage iiia t3 n1a m0 female 2007 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 4 4 5 2 5 3 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.595268e-06 4.161568e-07 11.6666666666667 16.6666666666667 1.66666666666667 40 30 9.2268437 7.8783213 10.4688650 6.0667673 9.6018038 8.9950885 9.6712252 9.9795337 10.8550687 12.3392773 10.0388965 10.2658379 0.4520682 12.0142991 2.4520682 10.5248592 8.5127527 8.6517291 8.2722355 11.9533963 1.4520682 13.7927413 5.1524958 10.7677950 10.9667708 7.3346997 4.6999846 11.8276392 11.0621588 3.6219815 9.2432197 6.6808757 NA 4.3589448 7.7094444 8.7603956 8.9114882 9.8991400 8.4854796 10.3453582 12.7258523 11.2746275 14.2731331 6.5239477 10.4018834 9.5813398 9.2690404 4.8443756 NA 7.4062526 11.2626283 NA 10.7974620 4.9756164 4.0370219 4.4520550 9.6952307 11.9970211 10.2448470 12.3297243 12.4995215 7.6517291 10.0959128 9.4771963 10.5100484 10.9368796 3.0370132 11.6424987 10.0162062 3.4520550 9.9834381 8.6468136 5.0959118 3.6219815 9.9795337 10.4548717 10.9114883 9.3619497 2.0370307 10.0370192 12.3177900 12.1888814 9.3945712 10.5019052 0.51762000 -0.70383000 0.69372000 -0.03931300 0.00563550 -0.67641000 -0.00028286 -0.00324210 0.10054000 0.00768790 1.81200000 0.02182700 0.02701900 -0.68733000 0.04168400 0.04168400 0.05460300 -0.00254990 1.28040000 0.03540400 2.16600000 -0.67218000 -0.69348000 0.63182000 -0.00752800 0.00000000 0.00000000 0.69090000 0.00869630 0.00869630 -0.67411000 -0.63995000 -0.67521000 -0.66702000 -0.00849450 -0.70212000 0.03988900 -0.00324210 0.02940900 0.60460000 0.61999000 -0.68089000 -0.38933000 0.03490200 0.03490200 0.03490200 0.02701900 -0.66859000 -0.67907000 0.60676000 0.01622900 0.09574000 -0.00298250 -0.70059000 -0.66794000 0.39738000 0.01678800 0.01678800 -0.67531000 -0.16388000 -0.67218000 -0.69348000 -0.67595000 -0.00752800 0.00000000 -0.02299100 -0.68058000 -0.65103000 -0.58994000 0.000 0.000 -0.679 0.000 -0.701 -0.701 0.397 0.000 0.000 0.000 0.000 -0.672 0.000 0.000 0.000 0.000 0.000 0.595 0.595 0.000 0.000 0.000 -0.662 0.000 0.000 0.000 0.000 0.000 0.000 -0.676 -0.676 0.000 0.000 0.591 0.000 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.679 0.000 -0.701 -0.701 0.397 0.000 0.000 0.000 0.000 -0.672 0.000 0.000 0.000 0.000 0.000 0.595 0.595 0.000 0.000 0.000 -0.662 0.000 0.000 0.000 0.000 0.000 0.000 -0.676 -0.676 0.000 0.000 0.591 0.000 -0.681 0.000 0.000 0.000 0.000 0.000 9.2399593 2.0370307 6.0959139 11.3945712 12.6244842 8.1928496 11.1850720 5.7079361 9.7230061 1.4520682 12.3434607 11.5972883 4.6219815 NA 4.0370219 7.2722360 3.0370132 9.9135362 11.8720169 10.0593871 9.8804169 3.2594081 9.1102682 10.5748847 6.4964512 6.1799767 2.0370307 NA 9.9657843 6.3827935 6.2594119 9.3377530 7.5709979 11.5473350 9.8593245 3.9114903 9.5813398 NA 6.7558370 12.5543605 9.3768692 10.1782748 1.4520682 NA 7.5916084 2.4520682 5.9756187 2.0370307 3.9114903 5.2594119 4.3589448 10.8085087 NA 9.5684006 10.7153258 9.2881070 6.1524958 9.5154517 10.8172856 8.0445138 3.2594081 3.9114903 9.9439098 0.4520682 3.2594081 3.2594081 3.4520550 12.153991 6.259412 8.844374 12.014299 11.698797 10.457681 11.953396 12.858262 8.840074 9.510048 12.463983 11.072277 7.406253 8.915581 4.452055 7.998951 9.835761 11.032315 13.082551 4.152500 13.414763 8.601652 6.601803 8.534206 5.037018 10.364976 6.621982 8.117393 10.038896 7.081413 1.452068 9.953894 8.193524 7.990517 10.403341 10.433624 10.108482 8.316243 11.297547 8.626982 5.310038 13.259053 8.911488 10.812904 11.355939 10.117393 10.090493 9.423600 10.896036 6.791907 2.452068 9.051226 6.925356 11.262628 6.661510 10.797462 5.310038 11.455202 9.695231 7.927790 15.868161 10.423600 10.427905 11.293621 11.584556 3.259408 NA 9.800785 8.429336 9.735145 TCGA-AO-A0JC 64 0 NA 1547 breast stage iia t2 n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 3 3 2 2 7 4 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 6.935946e-08 0 66.6666666666667 0 33.3333333333333 0 11.7778239 10.1343049 11.8944077 9.2082492 9.2596484 10.7903614 8.7971220 11.1679124 9.0276058 10.8623632 11.5030129 11.1278272 -1.1916561 10.0197173 3.8959036 7.5930721 5.6157929 9.7655394 7.5699885 10.5431470 NA 11.5674933 2.8959036 10.3961914 8.4323189 4.6664158 1.6157929 11.4673183 8.7494850 2.8959036 9.3231514 7.7626338 2.5088850 5.6664186 10.1218873 10.0599198 9.9306182 11.7615425 10.1365512 11.1170608 2.7153223 9.8049109 14.7508144 9.4750962 9.4046271 11.3816111 10.4679874 5.5226835 -0.1914914 9.4594890 11.3950426 NA 11.1733928 8.6238208 9.8308051 5.4083518 11.0542871 12.4146112 10.7369557 11.0411581 13.9861683 5.8852522 10.7358450 10.6523662 11.2658183 11.4090472 4.7391730 11.8735168 9.8885886 NA 10.3451702 9.3475961 4.4511386 8.5914356 10.8238524 10.7892910 10.3915201 10.1996809 3.0563581 6.7332499 13.3177175 13.7352893 9.9441466 9.5175212 0.09521700 0.09521700 -0.00360110 -0.00360110 -0.00442420 0.10804000 -0.00013862 -0.00401620 -0.00069303 -0.00069303 -0.00069303 0.00388540 0.00388540 0.00000000 0.00000000 0.00000000 0.00819590 -0.00290910 -0.00055444 0.00569190 0.01223700 0.01307400 0.01307400 0.01307400 0.01415400 0.01126100 0.01544700 0.01153900 0.00423850 0.00714090 -0.00429290 -0.00360110 -0.00447490 -0.00816240 0.10804000 0.10804000 -0.00013862 -0.00401620 -0.00401620 -0.00138580 -0.00138580 -0.00069303 0.00708260 0.00708260 0.00708260 0.00708260 0.00388540 0.00388540 0.00000000 0.00000000 0.00000000 0.00000000 0.00138680 -0.00290910 -0.00290910 -0.00055444 0.00569190 0.00569190 0.01558700 -0.10434000 0.01307400 0.01307400 0.00750000 0.02749700 0.01544700 0.01153900 0.00805670 0.01824300 0.01824300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.108 0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.108 0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3572595 1.8084262 4.8308029 9.9447877 11.0453484 7.3127795 10.3849216 11.2554741 10.0703794 4.8084365 12.3706798 11.1590258 4.6413264 1.6157929 3.8528278 8.5295364 3.9377210 11.2834107 11.1640637 10.4711057 8.8432364 2.1303708 8.9117251 10.9727158 11.3214246 9.4540959 2.7153223 NA 12.3146209 7.1167764 8.4879176 7.4594890 6.2513802 11.5240841 10.6741706 6.7153278 9.1190500 -0.1914914 8.2596486 12.8697242 10.6097416 8.1258500 NA 3.2678653 8.8487271 5.6157929 3.2007554 NA 10.8321917 4.5643904 7.7391744 10.6535353 NA 8.2719616 10.4777653 9.9031748 9.1996809 13.1150687 13.6620393 9.7198293 8.5226827 7.2596482 10.2882176 0.3934162 0.3934162 NA -0.1914914 11.206275 6.183477 9.094995 10.019717 11.333958 10.009336 10.543147 10.164889 9.423147 11.101047 13.489676 10.566661 9.459489 7.750952 2.393389 8.008110 11.451617 10.459938 11.585282 4.200755 12.657049 9.191061 11.004425 9.681881 8.415768 9.817405 11.330038 9.808437 11.503013 6.308283 1.978379 11.083980 4.393402 8.832427 9.634191 12.423377 10.282650 7.879900 8.410208 10.266331 10.505405 13.398553 9.930618 11.012703 9.957549 10.107645 10.568326 10.660186 10.646853 8.247229 NA 10.531940 9.030025 11.395043 11.875031 11.173393 5.437794 11.726928 11.054287 8.089278 14.772327 10.102484 11.304043 12.151623 11.373301 12.293638 8.073349 10.587746 9.706283 10.318707 TCGA-AO-A0JD 59 0 NA 2190 breast stage iiia t3 n1a m0 female 2005 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 3 2 1 1 1 2 2 4 5 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.496941e-06 5.895554e-07 16.6666666666667 18.8888888888889 4.44444444444444 31.1111111111111 28.8888888888889 10.1761653 10.4171373 11.6340179 9.0150105 8.5497966 9.2586796 9.9340905 9.9223907 9.2569062 13.0159938 10.9108771 10.6355543 3.5897994 12.1920295 2.0492125 7.5056742 3.5897994 8.7177888 8.3177151 12.7620658 3.0492300 13.1334910 4.7597204 9.0356888 11.1032755 7.2971538 1.1747260 10.9790468 10.7805453 0.9117299 6.5381625 7.4035762 3.2336580 3.2336580 9.9810382 10.8711451 9.5461708 10.9001234 10.5756365 10.3963443 -0.4102365 11.4851806 13.9153109 6.9445727 9.3202647 8.3546664 11.0379109 2.8377213 NA 9.3662276 13.5038994 NA 8.6245937 4.1133588 5.6450762 4.8935758 11.2600082 12.4541742 10.7842437 11.2884992 12.5890900 7.6121623 11.6845321 10.3329460 10.6403235 10.9387993 5.2304720 12.4279152 10.4364602 NA 10.3409202 9.3825849 2.9138947 4.9473482 10.8013787 10.6464323 9.9991856 9.9190303 8.1691108 7.5026838 12.4556245 11.1008059 10.3104663 8.2354528 0.1592000 0.7328400 0.0485460 0.0000000 0.1174100 0.0245880 0.1000200 0.0070938 0.1422100 0.1422100 -0.4958000 -0.0449570 -0.4898400 0.3913100 3.1798000 -0.4831300 0.1328800 0.1328800 0.0013434 -0.0480720 0.4975300 0.1872200 -0.4559700 -0.4696100 -0.1021100 -0.1021100 -0.4858600 0.1778400 -0.2798900 -0.5006000 -0.4628100 0.0485460 0.1174100 -0.2308000 0.0245880 0.0501080 -0.5477400 0.0370760 0.5870400 0.1670000 -0.5492500 -0.0255190 0.0445740 -0.5078400 -0.4734200 -0.4544700 -0.9426200 -0.4861800 -0.4846000 -0.4909900 -0.4998800 -0.4878500 0.1328800 0.1349500 -0.4890000 0.0359470 0.1489000 0.5373100 -0.1506700 -0.4606700 -0.4474900 -0.4559700 -0.7146200 -0.1021100 -0.1459200 0.1507100 -0.1859700 -0.4484600 -0.4532900 -0.484 -0.484 0.000 0.000 -0.336 -0.469 0.000 0.537 -0.110 -0.272 -0.473 -0.447 -0.447 0.000 0.000 -0.102 -0.102 0.159 0.159 0.188 0.188 -0.220 -0.448 0.151 -0.312 0.000 0.000 0.117 -0.088 0.000 0.000 0.000 0.000 0.177 0.177 0.000 0.000 -0.473 -0.473 0.000 0.000 -0.484 -0.484 0.000 0.000 -0.336 -0.469 0.000 0.537 -0.110 -0.272 -0.473 -0.447 -0.447 0.000 0.000 -0.102 -0.102 0.159 0.159 0.188 0.188 -0.220 -0.448 0.151 -0.312 0.000 0.000 0.117 -0.088 0.000 0.000 0.000 0.000 0.177 0.177 0.000 0.000 -0.473 -0.473 0.000 0.000 9.0358441 5.6772573 7.2008192 9.3971494 12.6897998 5.6430134 11.3951354 8.5405985 8.4218616 1.1747260 11.5066071 11.1605777 3.7992531 2.3971458 3.2336580 5.8089642 3.1747579 10.0614698 11.6538637 11.0479448 8.8798136 5.9821129 8.4399813 9.3744294 6.0574004 10.0368779 4.2045007 NA 10.0690696 7.9842572 6.9648341 8.9906741 4.8377213 8.7148723 9.9928067 4.0492300 9.1952740 -1.4100448 5.8751977 12.1142139 7.1328267 7.4906616 -1.4100448 2.9117299 9.3100388 -0.4102365 1.1747260 0.1747899 5.5086568 6.5471290 2.0492125 11.9289487 NA 9.7009302 10.2475597 10.5352384 4.5439907 9.9912075 13.3686931 8.5813166 4.7992479 3.1747579 10.4337156 1.9117299 NA NA -0.4102365 13.531106 6.304040 8.947346 12.192029 10.292400 12.075121 12.762066 12.289150 8.788240 10.587934 12.467366 11.152991 9.366228 8.974578 2.049213 7.045122 10.714239 10.313029 12.967615 7.384210 14.601368 8.598223 6.065527 8.180382 8.785782 9.866344 6.016059 5.174758 10.910877 8.095606 1.759710 12.372793 5.317716 8.686470 9.675931 9.393118 11.709384 9.767837 9.332104 11.987202 5.233650 10.751525 9.546171 10.757526 9.112376 11.578302 8.178509 8.669279 10.109922 9.295427 NA 8.763109 8.069575 13.503899 5.397149 8.624594 4.589793 9.343847 11.260008 7.975657 13.807184 10.863299 10.681561 11.950093 10.723258 3.113350 2.759710 10.796198 11.289584 8.598223 TCGA-AO-A0JE 53 0 NA 2335 breast stage iiia t2 n2a m0 female 2005 NA yes infiltrating ductal carcinoma 8 black or african american not hispanic or latino 3 2 1 2 6 1 2 6 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.075072e-06 2.774378e-07 20.5128205128205 43.5897435897436 2.56410256410256 17.9487179487179 15.3846153846154 9.9035946 10.1252012 10.9060368 9.1204771 8.7012274 10.5699326 9.1516830 9.6105532 11.4576764 14.2954756 10.1019570 10.7718845 0.6983963 15.5637590 4.3708408 9.1392815 7.4126579 8.5625985 8.7332113 12.0087411 NA 11.4810011 4.0907264 9.9512433 10.7356161 8.5454696 3.3422703 10.7705450 10.9145519 -1.3015148 7.6022943 7.6899344 2.1578522 6.0907307 9.6518814 9.7911696 8.9212072 10.9383092 10.0998253 9.8270511 4.2219776 9.5672349 15.2463010 7.6593702 10.0163732 10.7228595 11.1130976 3.6053047 2.6984185 8.9090836 12.7766466 1.5057893 11.2158357 6.1162649 7.6053032 5.5313035 10.1568190 11.8954754 10.2190310 11.8422738 12.6566025 7.4160890 10.9233184 9.9592555 11.1270343 10.6431244 4.0203422 11.6276708 9.9175809 NA 10.3966829 8.7577567 2.2244725 6.4126579 10.9698754 9.8795646 9.7214737 9.7872006 3.6526127 10.0095930 13.0443027 12.2173113 9.4912027 10.3503610 0.41614000 0.80349000 0.00989720 0.03569500 0.05996800 1.18790000 -0.00440120 0.03146700 -0.48940000 -0.48940000 1.90580000 -0.00481620 -0.00481620 -0.01144300 0.75738000 0.75738000 0.03400300 0.00794770 -0.38412000 0.36169000 0.00141690 -0.51442000 2.65870000 0.07013000 -0.05533500 0.77276000 0.45585000 0.35875000 -0.52602000 0.01226700 -0.51247000 -0.48602000 -0.05290700 0.05526100 -0.02914500 -0.02914500 -0.00440120 -0.45798000 0.00419330 0.00058467 -0.47232000 -0.47382000 -0.47208000 -0.46736000 -0.02750500 -0.02750500 -0.00481620 -0.01268300 -0.01144300 -0.05937500 -0.49463000 -0.49463000 0.03400300 0.00794770 0.00794770 -0.40752000 0.34961000 0.34961000 -0.01846100 -0.12386000 -0.50565000 0.07013000 -0.04939500 -0.06336000 -0.51638000 0.78624000 -0.52284000 -0.05681700 -0.05681700 0.000 0.000 0.000 0.000 0.000 0.000 -0.384 0.350 0.000 1.803 1.803 -0.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.359 0.359 0.000 0.000 0.000 0.000 0.000 0.000 -0.455 -0.455 0.350 0.350 0.000 0.000 -0.472 -0.472 -0.482 0.000 -0.440 0.000 -0.377 -0.179 0.000 0.000 0.000 0.000 0.000 0.000 -0.384 0.350 0.000 1.803 1.803 -0.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.359 0.359 0.000 0.000 0.000 0.000 0.000 0.000 -0.455 -0.455 0.350 0.350 0.000 0.000 -0.472 -0.472 -0.482 0.000 -0.440 0.000 -0.377 -0.179 8.5501615 3.3422703 4.9463379 10.4023160 11.5762716 6.3276227 11.1657632 9.5277784 8.3324793 0.6983963 12.5376161 12.3430449 4.2833736 1.0203422 3.8276971 7.6083051 9.0044741 12.4275020 11.7031595 11.1340826 8.6641966 0.2833292 8.1578441 9.8102001 8.0338029 11.7373313 3.3422703 -0.3015148 11.5907654 2.5057639 8.0493514 9.2239332 5.9651979 9.4733064 10.2131265 5.1902672 8.7536948 -1.3015148 7.0647341 12.2764312 7.4023163 8.0382622 NA 6.7964446 8.1942673 -0.3015148 2.9463379 5.9175797 7.2720596 5.1120412 4.3988497 10.8529140 NA 6.9029840 10.6124236 10.1922678 5.6870971 10.7152206 14.0191072 8.9976204 5.2375714 5.0559635 10.7297689 4.0559678 NA 1.0203422 2.7858853 12.6343104 8.5041564 8.6913506 15.5637590 10.1792025 11.5177931 12.0087411 9.2288187 10.1917674 10.6083055 12.7013153 10.4628693 8.9090836 11.7356161 0.6983963 7.5810552 10.3870998 11.106477 12.279495 6.574930 14.240445 8.923620 7.051559 8.769875 9.174146 9.890539 8.139282 5.466598 10.101957 8.667079 7.206207 11.069372 6.391900 7.804531 12.793067 10.388847 11.682297 8.960190 7.993033 10.206702 8.031568 10.420904 8.921207 10.874586 10.013562 10.857968 9.853863 10.367297 10.733555 8.875832 8.859544 8.983109 8.019822 12.776647 8.196264 11.215836 8.773892 10.527342 10.156819 8.123377 13.761934 9.825117 9.811503 13.469799 10.817678 3.221970 1.505789 10.279142 10.904816 9.005613 TCGA-AO-A0JF 68 0 NA 1980 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 2 2 3 3 4 3 4 4 4 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 2.427581e-07 0 20 5 55 20 10.2669377 10.2601719 11.7156112 9.9540935 8.0148418 9.4115419 10.2058111 10.0249885 10.0324195 13.2965565 10.8632554 10.4345609 0.2053925 12.8103580 4.1439403 9.9075143 5.4907434 8.3819301 7.7393202 12.7771732 -0.3796951 12.8644455 6.5030227 9.2681972 9.9773811 7.6260039 0.6203987 12.9364484 9.7051874 4.6203811 7.6005188 8.0212587 1.2053299 5.5392426 9.8527999 10.9298554 10.2817118 10.5034041 10.2826023 11.4259214 9.3086294 10.5796566 14.8923526 8.0306605 9.5811051 11.4785544 11.4147949 4.5745738 4.1439403 9.4074654 12.3457453 -1.3796951 11.7877972 5.9691067 7.1517604 5.5976593 11.0089345 11.5070283 10.3639512 11.9960973 12.7414268 7.9034674 11.1385404 10.9736444 11.5958688 10.9916112 4.8871646 12.2942402 8.8419662 -0.3796951 10.1892852 8.8953396 2.3263648 6.1826208 10.3389119 9.9613417 9.6803994 10.0895121 3.3752619 9.6441333 12.5743935 12.1036910 9.8994092 9.3138660 0.43092000 0.40411000 -0.00443120 -0.00443120 -0.00678130 0.00499690 -0.00539920 -0.00539920 0.00025738 0.00025738 0.00624810 0.00110930 0.00152550 -0.02958400 -0.02958400 -0.02958400 0.00597000 -0.00423100 -0.00180140 0.00346870 0.00597000 0.00458000 0.00458000 0.00458000 0.00291330 0.00291330 0.00777830 0.01628600 0.00958830 -0.00152430 0.00000000 -0.00443120 -0.00678130 -0.00678130 -0.00138580 -0.00304750 -0.00539920 -0.00539920 -0.00539920 0.00083195 0.00083195 0.01084200 0.00195070 0.00195070 0.00346870 0.00346870 0.00152550 0.01474900 -0.02958400 -0.02958400 -0.36918000 -0.07454400 -0.00263220 -0.00423100 -0.00423100 -0.00180140 0.00346870 0.00346870 0.00597000 -0.41915000 0.00458000 0.00458000 0.00666530 0.00291330 0.00777830 0.01628600 0.00708260 0.01866300 0.01192800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6330036 -0.3796951 6.1122331 10.2216856 11.1219675 6.8462125 11.3631095 10.0226929 8.8027735 5.4783603 11.6359683 11.2069609 2.6203753 4.5976563 3.3752619 8.6062209 4.0126938 10.4520821 11.1590530 10.5182245 9.1643775 5.0297709 7.2460879 10.0762200 7.0961121 10.6115465 3.1439484 -1.3796951 11.4766100 7.5716639 7.2821571 8.0062414 5.6203782 9.6592569 10.2015796 4.5511161 7.9624536 NA 8.4922842 12.7596106 7.3346246 8.7663112 -0.3796951 5.3346255 8.5687462 -1.3796951 5.2350875 -1.3796951 6.3951656 5.2447729 3.0798048 10.2188969 -1.3796951 9.3576263 10.4465302 9.8040143 5.6316049 9.9383568 12.2191295 9.6918414 2.2053299 4.2350913 11.9339707 3.3208168 NA -0.3796951 1.4277134 12.527645 4.112233 8.531771 12.810358 9.985608 10.728577 12.777173 12.314955 8.905099 10.940333 13.443199 9.500728 9.407465 9.874817 NA 7.275015 11.175208 11.2253955 11.9420253 6.4405586 13.7348937 9.0116225 6.5451915 8.4261230 7.9309916 10.4028285 7.0297698 8.3121224 10.8632554 6.9602290 0.6203987 11.2734480 3.3208168 5.3266344 11.6331782 10.2866030 10.4058315 8.0403390 8.4999623 12.8352294 5.6427478 11.3438757 10.2817118 10.4760262 9.4033772 11.1795171 10.5632601 10.5683811 10.5606926 9.6756614 -1.3796951 9.1625404 8.5204910 12.3457453 4.4277335 11.7877972 8.4564296 10.0979653 11.0089345 7.2642352 13.8177877 10.2114338 10.6575828 13.1139218 10.0638406 0.2053925 2.0236457 10.5872450 10.6347483 9.3852507 TCGA-AO-A0JG 49 0 NA 798 breast stage iiia t2 n2a m0 female 2009 NA yes other, specify 4 white not hispanic or latino 2 2 1 2 2 2 3 4 3 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.3942239 10.7041619 12.4929502 9.7728869 8.6469431 9.3836885 10.2461519 10.0803103 9.8258948 13.9769705 11.9226553 11.3422909 -0.7083964 12.5887949 4.9063038 9.0347434 5.6579143 8.7262202 8.6688024 13.4693230 -0.1234339 15.5094456 4.9920297 8.8197825 10.4627688 9.4362503 NA 11.4953988 9.3236378 2.1984942 7.3250149 7.0794944 -1.7083964 5.5583779 10.1553912 10.3994629 9.7723822 10.2588183 9.8447412 12.0408330 5.7510245 10.1323699 14.5085462 8.6766994 12.3933199 11.0175972 11.3480604 5.1117700 8.7632672 9.8292957 11.1296141 1.0989585 11.3702432 5.6666316 7.0827547 4.8614492 10.0452266 12.1935902 10.2074713 11.8679583 13.2297013 7.8307510 11.0647312 11.3191819 11.6796093 11.0933004 5.4413407 11.9439889 12.9163875 NA 9.8053195 8.6513416 4.5828992 5.2915925 10.4618301 10.2406891 10.6988598 9.5987928 2.1984942 8.0548045 12.8950445 11.6451524 10.3239821 9.7510236 0.47426000 0.48527000 -0.51187000 0.00805670 0.00283230 0.00346870 0.66974000 -0.51640000 -0.51692000 -0.51692000 0.00000000 -0.00166290 -0.00166290 0.00374650 1.43050000 3.65690000 -0.00097017 -0.00097017 0.00360760 -0.00263220 -0.00083160 -0.00055444 -0.50567000 2.23160000 -0.00166290 -0.00166290 -0.00166290 0.00402430 -0.51373000 0.00541390 -0.00705760 -0.51187000 0.00283230 0.00718610 0.00346870 0.00346870 -0.52808000 -0.51640000 -0.51640000 0.00263570 0.00263570 -0.51692000 0.00263570 0.00263570 0.00263570 0.00263570 -0.00166290 -0.00166290 0.00305220 -0.50525000 -0.51486000 -0.51486000 -0.00097017 -0.00097017 -0.00097017 -0.51702000 -0.00263220 -0.00263220 -0.00083160 0.00194180 -0.52328000 -0.50567000 0.00468820 -0.00166290 -0.00166290 0.00402430 -0.00360110 -0.51897000 -0.51897000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 0.000 0.474 0.474 0.000 0.000 0.000 -0.519 0.000 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 -0.516 -0.516 0.000 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 0.000 0.474 0.474 0.000 0.000 0.000 -0.519 0.000 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 -0.516 -0.516 0.000 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 8.3630545 0.8765661 5.6839098 10.7986434 11.1757625 6.6605793 11.6290746 10.2770035 8.6592032 3.5010442 11.6306069 11.0254653 3.6135199 3.9920342 3.2915888 8.3909398 4.4208731 10.3997897 12.0055155 10.9959280 9.5436660 1.9920433 8.1665734 10.2245449 8.1969793 5.8307497 1.6135317 -1.7083964 10.4327412 7.4260181 7.2745860 6.8576464 6.0924929 9.7488857 11.4519362 4.7993878 7.8896445 -1.7083964 8.3536382 12.3684911 8.5953727 8.0614301 -1.7083964 1.7510352 8.7944237 -1.7083964 4.8765562 4.8614492 7.4336989 4.2042425 4.0195151 9.8576461 0.8765661 8.7571583 11.6358879 9.7046910 6.7834449 9.8732634 12.9732148 8.7448628 5.6044747 4.3139569 11.9088299 4.5395187 NA 1.4615286 1.2916036 14.552703 5.529996 8.503480 12.588795 10.927083 10.633667 13.469323 13.232548 12.381671 11.172515 13.354987 9.907681 9.829296 9.738158 NA 9.203733 11.950138 11.0383163 11.9854056 8.2370359 13.7906889 9.3346192 7.7115520 9.6101347 6.7673251 10.8685156 7.6579143 9.8461808 11.9226553 6.0126916 0.2916036 11.4220017 4.3790525 6.2661212 10.7430607 10.0334803 11.0543893 7.3305109 8.8765544 11.5583786 6.5252123 11.4151767 9.7723822 10.8593104 9.1795742 10.0973358 10.1185377 10.4605774 10.8751450 8.9264030 NA 9.0747703 7.4981910 11.1296141 7.3710770 11.3702432 6.6752966 10.9274507 10.0452266 7.5653877 13.7925857 9.8092614 9.9794050 12.0668937 10.3090965 5.0058356 0.6135317 11.1248774 10.6073077 9.6197059 TCGA-AO-A0JI 56 0 NA 1528 breast stage iia t1c n1 m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 2 4 3 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 6.935946e-08 46.1538461538462 0 0 30.7692307692308 23.0769230769231 10.740065 10.358388 11.994718 9.783791 8.865702 7.822917 9.596801 8.991233 10.258466 13.270346 10.496383 10.750884 1.768841 13.306221 6.033544 9.601731 7.138074 8.603136 8.570459 13.089829 3.686377 15.291967 2.058351 9.493036 11.132975 9.399816 NA 6.419094 9.932630 1.768841 7.309722 5.893537 NA 4.353803 10.423477 9.847436 10.368754 10.617811 9.337008 11.611366 2.299362 10.920280 14.120792 8.502963 10.362128 12.204395 11.240290 3.991236 6.535554 9.361298 10.553112 -1.401254 10.758787 3.728204 5.965237 1.406265 10.072621 11.514608 9.830137 10.348366 13.071607 8.703514 10.784101 11.042823 10.483849 10.742937 5.228272 11.349832 12.161158 NA 10.053729 9.580483 4.061292 4.380272 10.527804 9.533344 10.208556 10.790283 3.643314 4.686377 11.993914 10.663658 9.957017 8.545822 0.00777810 0.00624810 0.00541390 0.01590800 0.03354900 0.00805670 0.00166420 -0.79494000 3.65690000 -0.08983100 0.70062000 -0.00788630 -0.00807980 -0.01064600 -0.01064600 -0.01064600 0.00000000 0.00000000 -0.79245000 0.00152550 -0.01037000 -0.03313200 -0.03313200 -0.03313200 -0.05118100 -0.05118100 -0.05118100 0.68141000 -0.81030000 -0.78681000 -0.78696000 0.00541390 -0.01945200 0.03354900 0.00805670 0.00805670 0.00166420 -0.79494000 -0.79494000 -0.07908900 0.01084200 -0.06477700 -0.01497500 -0.01497500 -0.01908600 -0.01908600 -0.00807980 -0.00636680 -0.01064600 -0.01064600 -0.01064600 -0.03830600 0.00000000 0.00000000 0.00000000 -0.78883000 0.00152550 0.00152550 -0.00633090 -0.81802000 -0.03313200 -0.03313200 0.00055459 -0.05118100 -0.05118100 0.68141000 -0.00595220 -0.03939400 -0.03939400 0.000 0.000 0.000 0.000 0.000 0.000 -0.792 0.000 0.000 0.000 -0.776 0.000 0.000 0.000 0.000 0.000 0.000 -0.787 0.000 0.681 0.681 0.000 0.000 -0.729 -0.729 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.795 0.000 0.000 3.657 3.657 0.000 0.000 -0.126 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 -0.792 0.000 0.000 0.000 -0.776 0.000 0.000 0.000 0.000 0.000 0.000 -0.787 0.000 0.681 0.681 0.000 0.000 -0.729 -0.729 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.795 0.000 0.000 3.657 3.657 0.000 0.000 -0.126 -0.126 8.9376522 NA 4.4318035 11.1690086 10.9149143 8.5161984 10.5099331 11.6951334 8.8301368 6.0583468 11.2954486 11.0859015 2.9912270 3.4062645 3.9564656 8.3637874 2.0583511 8.0562968 11.4082819 10.6181589 9.5244702 0.5989368 6.6157238 7.4784986 5.8468443 3.9912361 NA NA 9.6877039 9.3208694 5.8083696 8.5761956 5.1067084 10.0131780 10.0382271 1.9208268 8.7887402 -1.4012537 7.6916730 12.2834452 8.4723598 6.2993546 -1.4012537 6.3802758 8.7825511 -1.4012537 5.4815573 -0.4010632 4.7074420 5.9918347 2.4062645 9.7862678 NA 7.9498547 10.4010281 10.0141293 4.7074420 9.4420517 11.7657065 6.9782940 2.0583511 2.6863885 13.5797247 0.5989368 NA 1.7688407 -1.4012537 14.2968335 5.5875990 9.4420517 13.3062209 9.2173012 10.8492141 13.0898292 12.7321382 9.0962985 10.6467212 12.7815428 11.6698752 9.3612977 7.9343060 0.1838358 6.9912327 12.1170770 11.1590097 11.7752447 6.9739556 12.9443175 7.5443594 5.1838795 9.7191537 9.1165852 10.6728965 5.5647013 8.1477376 10.4963831 7.7204495 -0.4010632 11.8979806 3.4568981 7.1294386 9.3412250 10.2218826 10.8477328 10.2377452 8.6212834 12.5821765 5.1687704 10.8400945 10.3687535 10.9278711 9.9885471 11.5449081 9.1244364 9.8680424 10.9679677 9.5840461 NA 8.8585294 6.0167682 10.5531120 6.0083076 10.7587870 3.5531147 10.9660574 10.0726214 6.1535054 12.7794465 9.2227971 10.4098889 11.9170348 9.3174486 4.0583511 2.4062645 9.9761262 10.7856490 9.6508044 TCGA-AO-A0JJ 54 0 NA 1887 breast stage iib t2 n1a m0 female 2006 NA yes infiltrating lobular carcinoma 2 white not hispanic or latino 2 2 3 1 4 3 6 3 3 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 1.040392e-07 18.1818181818182 0 9.09090909090909 36.3636363636364 36.3636363636364 10.3086520 9.7588938 11.6631436 9.3346326 8.8949793 9.2821949 9.7732134 10.0607758 10.0519936 10.0273147 9.8679916 10.6463866 NA 12.0027127 3.6963945 9.6525320 7.2059525 8.4423522 9.7612903 13.1090853 1.5264695 13.7857747 7.3844540 9.3864424 10.2173438 7.9379840 NA 10.7026459 9.7001499 4.5488435 8.1039015 8.0042311 NA 5.8302528 9.6685799 10.4929783 9.8618631 11.6149298 8.5320976 10.9440616 3.6139323 10.6424918 14.8179673 7.3279550 9.3758779 11.3595605 11.0953790 4.4806723 1.6963945 9.3466518 12.1421025 -0.4735305 12.2930017 5.5264726 7.2746661 4.3844505 10.6560778 11.7636828 10.2967238 12.6056242 12.7026460 8.1594682 11.0307953 10.9237784 11.6455761 11.1804374 5.1558302 12.3359395 10.7938448 NA 10.1926968 8.7838606 2.5300707 6.7838613 10.3534185 9.7576940 10.2967238 9.9657843 3.1703257 9.9112566 13.3480475 12.7936984 9.5502271 9.6685799 0.49701000 0.49701000 0.00152550 0.00152550 0.00750000 0.00360760 -0.52148000 -0.52148000 0.01042400 0.01042400 0.00652620 0.04287400 0.04287400 -0.00124730 -0.00124730 -0.00124730 -0.00650500 -0.00650500 -0.47797000 -0.00235530 0.01042400 -0.02644100 -0.02644100 0.27805000 -0.03220900 -0.03220900 -0.01395300 -0.00027724 -0.02292800 0.00680440 -0.00443120 0.00152550 0.00750000 0.00750000 0.00360760 0.00360760 -0.54593000 -0.52148000 -0.14013000 0.00221930 0.00221930 0.01042400 0.00000000 0.00000000 0.00000000 0.00000000 0.04287400 0.04287400 -0.00124730 -0.00124730 -0.00124730 -0.00124730 -0.00650500 -0.00650500 -0.00650500 -0.47797000 -0.00235530 -0.00235530 -0.00733390 -0.53419000 -0.30710000 -0.03122300 -0.34744000 -0.03220900 -0.03220900 -0.02484000 0.01950300 -0.01202400 -0.02068700 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 0.000 0.000 0.000 -0.524 -0.281 0.000 0.000 0.000 0.000 0.000 0.000 0.497 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.521 -0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.125 -0.059 0.000 0.000 0.000 0.000 0.000 0.000 -0.478 0.000 0.000 0.000 -0.524 -0.281 0.000 0.000 0.000 0.000 0.000 0.000 0.497 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.521 -0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.125 -0.059 8.6557557 NA 6.1775252 10.2590642 11.3768550 8.1852020 10.9514264 9.9271015 8.7090162 4.9015138 11.2934158 11.2322326 5.5925617 4.1988948 3.3844505 7.8927948 4.3593595 10.6534999 11.6522092 10.6179082 9.2492804 3.9187869 7.5844642 9.9203995 7.7528850 8.3160063 -1.4735305 NA 11.0612620 6.5264726 7.5681317 7.7063820 6.0022052 9.7683249 10.3502381 7.3937517 8.5817553 -0.4735305 8.0559033 13.0347009 8.0362478 7.6812911 -1.4735305 4.6139382 8.4303547 2.9187869 4.9358652 0.1114320 7.6112808 5.4418752 5.2679402 10.1793178 0.1114320 9.0906224 9.8308242 9.8170678 6.2679402 10.6139357 12.8119473 9.6179082 2.8483976 4.6349998 13.0504023 0.5264695 NA 3.3844505 1.6963945 12.943450 4.848403 8.398378 12.002713 10.013308 10.537351 13.109085 11.701555 9.320889 10.708246 13.276499 9.818219 9.346652 8.943270 3.050031 7.247572 11.723382 10.6907513 11.7107283 6.6505937 14.3290142 8.7310440 7.8971599 8.7600925 8.9112781 10.0423205 8.0578542 8.2355567 9.8679916 7.1521814 1.6963945 10.7958918 8.8325344 7.4226232 11.0128051 10.1962437 10.8938876 7.7648776 8.2355567 13.0629022 8.2389998 10.9622967 9.8618631 10.7897420 9.8336736 10.5623029 9.9300174 10.3074226 10.7013985 9.1029573 -0.4735305 9.3224638 7.5432809 12.1421025 8.4453361 12.2930017 8.8049222 10.5243580 10.6560778 7.1151873 14.1698217 10.4627426 11.0774601 12.5771718 9.9981481 4.7932612 0.3745109 10.3731386 10.3569880 9.1365749 TCGA-AO-A0JL 59 0 NA 1683 breast stage iiia t2 n2a m0 female 2006 NA yes infiltrating ductal carcinoma 7 white not hispanic or latino 3 3 4 4 6 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.421869e-06 4.161568e-07 18.8679245283019 26.4150943396226 3.77358490566038 28.3018867924528 22.6415094339623 10.7041669 8.4498816 10.9437510 6.4192928 8.4624377 8.9157190 9.3985346 10.4574284 10.8373868 13.1542931 10.0565391 10.3952640 0.8749936 14.0756160 3.5379421 8.9120621 7.9482218 10.5544528 8.3151500 7.6298600 NA 10.3473252 8.3985346 10.6175629 11.5658438 5.0973664 1.6119278 8.3358517 11.2445701 3.4599299 7.7938361 6.8369050 NA 5.7162749 8.2586772 10.2073823 9.7667565 9.5915065 8.9904501 11.4180046 3.3774708 5.4397561 14.2755409 8.5975755 9.6017585 10.9800082 10.5473981 6.4896826 8.6343061 7.4649361 10.9024180 0.2899525 10.1534222 2.9904467 5.5188278 1.6119278 9.8455580 12.0925266 10.6409494 10.5690404 11.9109173 9.4611870 10.8834013 10.1886116 10.5254262 10.6376316 3.4599299 11.1768499 11.1268496 NA 9.9093132 10.5603056 4.4192962 3.7494377 9.1495449 9.2644248 9.5800290 10.6045935 1.2900115 8.2871897 12.3883714 12.1920084 10.2332576 10.6791038 1.7942000 2.4906000 -0.0146410 -0.0022168 0.3243100 0.5084600 0.7652300 -0.2929600 0.2212900 2.6422000 1.9343000 0.9721400 0.5593900 -0.2747600 -0.2747600 -0.2747600 0.6410300 -0.2840600 -0.5992600 -0.3240300 -0.3080300 0.5641800 3.6569000 -0.3102600 0.4283900 3.6104000 -0.2599700 0.5241500 -0.2916500 -0.0042929 -0.4593900 -0.0171160 0.0788710 0.0546600 -0.5943900 -1.2819000 0.7652300 -0.2929600 -0.2929600 0.0289030 0.5633000 0.2287000 0.6240600 0.6240600 -0.3051200 -0.2769100 -0.2941400 -0.2941400 -0.2747600 -0.2747600 -0.2833500 -0.2833500 -0.2706900 -0.2840600 -0.2840600 -0.5754600 -0.3226300 -0.3212400 -0.3140900 0.2579300 0.1569600 -0.8353500 0.2714300 0.4283900 -0.2599700 0.3976100 -0.0283550 -0.0501000 0.4651900 0.423 0.000 -0.275 -0.275 -0.284 -0.284 -0.575 -0.323 -0.294 0.825 0.825 0.157 -0.135 1.380 0.267 0.428 -0.224 0.000 1.719 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.403 -0.106 0.472 -0.293 0.652 0.000 -0.326 -0.326 0.319 -0.305 0.109 0.109 0.423 0.000 -0.275 -0.275 -0.284 -0.284 -0.575 -0.323 -0.294 0.825 0.825 0.157 -0.135 1.380 0.267 0.428 -0.224 0.000 1.719 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.403 -0.106 0.472 -0.293 0.652 0.000 -0.326 -0.326 0.319 -0.305 0.109 0.109 9.7036382 NA 8.0482335 11.5664255 10.9882808 7.1601286 11.3500306 7.9824512 8.9921830 NA 11.8177316 12.1247380 4.9904512 0.2899525 4.2442097 9.7277624 1.6119278 8.9939138 10.6999315 11.2956348 9.8664946 2.0973748 8.6365238 10.0102545 6.7162749 7.6164400 NA 6.1603757 10.7057520 4.0449012 4.6119396 7.9973692 10.0639737 10.6231041 10.5573821 NA 8.9211873 -0.7100475 7.4397578 12.2209324 8.8843348 10.2878954 0.8749936 3.1969060 9.0162283 0.2899525 4.4192962 NA 3.4599299 5.0983943 4.4599365 10.4498816 5.8899237 10.0033968 11.3078626 9.0762798 6.3668258 8.6164397 10.2383775 8.8824673 5.7657442 3.0973580 10.0925266 3.4599299 12.7588888 3.9338653 9.8693263 9.9903633 9.5532795 8.7718097 14.0756160 9.4244365 11.4400748 7.6298600 9.5742559 8.5308015 10.0565391 12.7879868 10.8165095 7.4649361 8.7036382 0.8749936 6.9765103 11.9426312 10.4063542 11.8133272 5.7978042 12.5242259 8.3587883 6.4089513 8.9211873 6.4994632 10.0610705 5.1229005 4.7162776 10.0565391 5.4192928 0.2899525 9.7858652 7.8712110 8.7025377 10.3513814 10.3761464 9.7687798 8.1938920 10.0255662 6.2557953 3.9904467 12.2112357 9.7667565 10.1665272 10.3102957 11.2507363 11.5379378 10.5313976 9.9606665 6.5567972 1.6119278 8.9511649 8.3234331 10.9024180 5.4798352 10.1534222 9.2354540 10.4346685 9.8455580 7.6609158 14.5689315 9.6552391 10.1165588 10.7733222 11.5608895 0.2899525 2.2900115 11.0590215 8.1665272 9.0989745 TCGA-AO-A0JM 40 0 NA 2184 breast stage iib t2 n1 m0 female 2005 NA yes infiltrating ductal carcinoma 2 NA hispanic or latino 1 2 1 2 4 3 2 2 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.427581e-07 34.4827586206897 17.2413793103448 3.44827586206897 20.6896551724138 24.1379310344828 9.8125584 9.9056131 11.3110953 8.4787850 9.6818547 9.1691937 9.2029187 10.3843535 9.8073058 14.1850161 10.5940928 10.9779128 -0.8764662 15.7323673 3.2109031 9.6252710 5.7233456 8.7762790 8.5808148 13.0804453 NA 13.8626872 0.7084080 10.2432116 10.4088361 6.5328250 2.1234344 9.2280327 12.0707056 NA 6.3618385 6.8445325 NA 4.1234344 9.4053640 10.0318266 9.3843536 10.5071382 9.7591520 9.9332020 3.2933558 10.1895231 15.0369545 7.8142005 9.8924452 10.2002496 10.5269786 3.6469921 3.0303184 9.4677298 10.6761031 NA 11.3181908 4.9307894 5.1895241 3.5828691 9.9186619 11.8436782 9.8436782 12.6058638 12.5296389 7.7381436 10.9328001 10.0501451 10.9716656 10.2933590 3.7672946 12.4883893 9.6042241 0.7084080 10.3286163 9.5746450 2.8238716 5.4088375 10.8453876 9.8368204 8.8547531 8.7252047 1.9307752 11.0560178 12.8935816 11.4557503 9.4385835 10.3594481 0.93142000 0.93142000 0.39081000 0.40177000 0.41563000 0.43496000 0.36190000 -0.02013800 0.44206000 0.44206000 0.81892000 -0.01995500 -0.00283890 -0.00263220 0.72508000 -0.10171000 -0.02841200 0.52783000 -0.45104000 0.83019000 0.30202000 -0.91032000 3.65690000 3.21660000 -0.46206000 -0.45693000 -0.03463100 0.42318000 -0.46982000 -0.00117780 0.00000000 -0.45136000 -0.46109000 0.40644000 0.23473000 0.23473000 0.74651000 -0.02013800 -0.01986300 -0.00995650 -0.46291000 -0.48113000 -0.00263220 -0.00263220 -0.00868090 0.41429000 -0.00283890 0.01462100 -0.01450300 0.72508000 -0.10171000 -0.11325000 -0.02493400 -0.01064600 0.00015442 -0.45104000 0.79995000 0.81396000 0.30042000 0.00889200 -0.46408000 -0.46664000 0.00180300 -0.46238000 -0.03463100 0.43328000 0.40111000 -0.03149600 -0.01601700 0.000 0.000 0.000 0.000 0.000 0.000 -0.451 0.800 0.300 0.420 0.000 -0.423 0.000 0.000 0.000 -0.457 -0.457 0.000 0.931 0.433 0.433 0.409 0.000 0.000 0.000 0.000 0.000 -0.448 -0.042 0.176 0.176 0.362 0.000 0.000 0.000 -0.453 -0.046 0.000 0.000 0.409 0.278 0.000 0.000 0.000 0.000 0.000 0.000 -0.451 0.800 0.300 0.420 0.000 -0.423 0.000 0.000 0.000 -0.457 -0.457 0.000 0.931 0.433 0.433 0.409 0.000 0.000 0.000 0.000 0.000 -0.448 -0.042 0.176 0.176 0.362 0.000 0.000 0.000 -0.453 -0.046 0.000 0.000 0.409 0.278 8.7690923 NA 4.7672893 10.2964864 12.7368781 6.9004587 10.8415386 9.3137649 8.0541712 NA 11.2092383 12.3275389 5.2108953 3.7672946 1.4453559 7.9436131 3.1234344 11.4660642 12.1124736 10.9420161 9.4809858 4.0303272 7.7852118 9.3304482 5.9814143 5.1007128 NA NA 10.5344152 5.7816456 7.3280053 7.6625929 3.9814143 9.6478288 10.0688778 0.7084080 8.5412864 -0.8764662 6.7454861 12.4160432 6.3902206 7.6272595 -0.8764662 0.1234013 8.4294955 0.1234013 4.4809889 NA 5.1234344 3.5828691 0.7084080 10.6047288 -0.8764662 5.6312295 10.8522048 10.1705578 3.5157503 9.7699927 13.1716654 7.5951090 3.5157503 3.7672946 10.6928149 4.1234344 NA 0.1234013 1.4453559 13.1631241 6.3902206 8.9243339 15.7323673 10.1114085 10.9464030 13.0804453 12.2265578 8.9763224 10.3492438 13.4963670 10.0863300 9.4677298 9.9642119 -0.8764662 8.7046344 11.1972408 11.480436 13.061543 6.418055 13.061265 8.790528 4.956326 8.851354 8.218831 10.733601 5.599166 9.140242 10.594093 6.156858 1.123401 10.714956 6.313259 7.515451 10.545499 10.272546 11.592567 8.027316 9.373732 10.997262 4.515750 10.200570 9.384354 10.999183 10.688536 9.582866 9.465509 10.755975 10.715424 9.255291 2.708386 9.083552 7.485378 10.676103 4.904792 11.318191 7.788770 10.494121 9.918662 7.432274 13.533819 10.183454 9.765486 12.249332 10.268729 NA NA 9.507138 11.012558 8.891618 TCGA-AO-A124 38 0 NA 3506 breast stage iia t2 n0 (i-) m0 female 2002 NA no other, specify 0 white not hispanic or latino 3 3 4 4 1 1 5 5 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 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12.7377616 11.6964785 10.6042318 9.7191985 0.9828700 3.6569000 -0.1294000 2.1557000 -0.1703100 -0.1101100 1.9594000 3.6569000 -0.1355200 -0.1355200 1.2076000 1.1619000 0.4696400 -0.0030475 -0.1069700 -0.1234300 1.2592000 -0.1502900 0.4944100 -0.1325800 0.6386500 -0.1074900 0.9546800 1.3645000 0.4236800 0.6175200 0.4486700 -0.0789430 -0.7558200 -0.1477200 -0.0906260 -0.1294000 -0.7828600 0.9874200 0.4847500 -0.1565600 1.0466000 1.5132000 1.0022000 0.9616500 0.5500000 -0.7941100 1.1279000 0.5523000 0.5909800 -0.0847930 -0.7645800 -0.0344950 0.7058800 -0.1069700 -0.7027100 -0.7473400 1.0380000 -0.1396200 -0.1197700 -0.1484900 -0.1455400 0.5267800 -0.7530500 -0.0013858 -0.1074900 0.5068900 -0.7390600 -0.0904930 -0.1065700 0.4381700 -0.1449000 0.4558100 -0.7602900 0.322 -0.116 0.000 0.000 1.038 -0.150 -0.127 -0.133 0.508 1.413 0.000 0.392 0.499 1.103 1.103 0.424 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 -0.129 -0.129 -0.787 -0.787 -0.110 -0.110 1.439 1.439 0.481 0.481 -0.152 -0.152 0.000 0.000 -0.125 -0.441 0.322 -0.116 0.000 0.000 1.038 -0.150 -0.127 -0.133 0.508 1.413 0.000 0.392 0.499 1.103 1.103 0.424 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 -0.129 -0.129 -0.787 -0.787 -0.110 -0.110 1.439 1.439 0.481 0.481 -0.152 -0.152 0.000 0.000 -0.125 -0.441 8.3705623 0.1955996 6.5265540 10.6496788 12.0762724 4.8469746 10.7716485 9.4325715 7.3175582 -1.8044004 11.1594358 9.7697050 3.4435669 NA 5.2180062 9.0182074 3.5175655 9.1491056 11.7333404 10.5022679 9.2138367 -1.8044004 8.5608655 9.7664411 5.1843200 10.7654922 -0.2194379 -1.8044004 11.1940508 1.7806041 5.0782811 9.0118204 11.3048143 10.3751228 10.8034293 -0.2194379 10.0582740 2.2830921 8.5198171 13.1167802 7.6834768 7.9704234 NA 4.3041605 8.3780308 3.6550656 3.1025238 -1.8044004 3.6550656 2.0029905 6.4099560 11.4075249 10.4694322 9.9192976 11.3437954 10.2920224 3.2400242 9.5739315 11.8229425 7.3300627 2.5879650 3.2400242 11.2617258 1.3655806 9.4459350 2.5879650 8.1040294 8.385461 8.907304 7.883887 12.937420 10.572847 12.419337 5.817687 10.511918 9.187159 11.810691 12.941783 11.376789 10.658650 8.257683 2.655077 9.035628 10.331346 11.126374 12.118593 6.957188 13.975484 8.577180 5.802966 9.189283 10.426029 10.152684 4.655066 3.780604 11.020595 8.428057 7.269778 11.727505 9.121933 9.589622 13.686895 9.470597 10.606088 3.305839 8.686488 10.508520 5.149832 9.171950 9.403871 9.797407 9.601842 11.551263 11.578261 10.188929 10.757163 8.528792 5.544365 8.307842 7.317170 11.595182 5.471760 8.015815 7.187158 10.047561 6.963821 8.259032 14.258378 9.446527 10.483349 13.822743 11.352194 7.111517 5.494752 10.153464 10.485943 9.133746 TCGA-AO-A125 72 0 NA 3456 breast stage iia t2 n0 (i-) m0 female 2002 NA no other, specify 0 black or african american not hispanic or latino 1 1 3 1 NA NA 4 1 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.774378e-07 37.037037037037 18.5185185185185 3.7037037037037 25.9259259259259 14.8148148148148 10.5624933 8.9155651 11.2767527 7.7325785 9.1849923 9.7170936 10.6766369 8.3696418 9.8311729 12.4578814 10.4842301 9.8864418 2.9200836 12.6776373 3.3530409 7.9947573 7.8002761 8.4607897 9.8789233 13.3745855 -0.4018254 14.2953644 6.9775307 10.7794352 10.7251795 5.8742781 NA 7.0452354 9.1859300 NA 7.3696418 5.4183316 NA 1.9200646 9.4800312 9.6615476 10.9327051 11.7726101 9.9357744 11.3723218 11.5147784 12.3634386 13.7793436 10.1098557 10.1513018 11.2213481 10.8514091 3.2420079 3.1831212 7.7605437 11.0254653 NA 11.1469744 1.9200646 2.1831053 2.9200836 9.9807765 12.4683245 10.9197987 13.8440765 13.2141269 8.3663366 10.5797197 10.5925201 10.8786333 11.0862437 3.7274304 11.6961846 11.0887527 0.5981746 9.9818568 8.0032941 5.0941685 3.3530409 10.8534762 10.0834787 10.2142418 8.8707824 NA 10.4646587 14.1102757 10.8620085 10.3650954 9.9324258 1.78690000 1.78690000 -0.01194900 -0.01194900 -0.00981720 -0.01233700 -0.00733390 -0.02035100 -0.00346270 -0.00346270 -0.01451900 0.00485790 0.00485790 0.00000000 0.00000000 0.00000000 -0.00470790 -0.00470790 -0.00899060 0.00638710 0.01307400 0.00319100 0.00319100 0.00319100 0.00982090 0.00982090 -0.00443120 0.01978300 0.02244400 -0.01037000 -0.01275200 -0.01194900 0.00013863 -0.02268600 -0.01233700 -0.01233700 -0.00733390 -0.02035100 -0.02035100 0.94262000 0.94262000 -0.00346270 0.00108130 0.00108130 0.00388540 0.00388540 0.00485790 0.00485790 0.00000000 0.00000000 0.00000000 0.00000000 -0.00470790 -0.00470790 -0.00470790 -0.00899060 0.00180300 0.00180300 0.01307400 -1.04080000 0.00319100 0.00319100 0.01684500 -0.00115300 -0.00885100 0.01978300 0.00930980 0.03059100 0.03059100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.002 -0.978 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.943 0.943 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.002 -0.978 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.943 0.943 0.000 0.000 0.000 0.000 0.000 0.000 8.8904741 1.9200646 5.5639360 11.1682454 11.1064425 8.4781953 11.6319196 7.4649059 9.1952740 -1.4020160 11.7324184 10.5617711 2.9904648 3.4055023 3.9904739 8.1661083 1.7680784 10.1392491 11.2013152 11.8367065 9.6356994 7.6803018 8.3679904 10.6547902 5.1980658 0.9200646 4.2985923 NA 10.3836049 5.6856150 5.7780614 7.4215196 7.0940080 10.7458821 11.0093986 3.4055023 8.0799519 NA 7.4342029 12.0778065 10.4685172 8.2634885 0.1830736 1.4055023 8.9435577 1.9200646 0.1830736 1.4055023 0.9200646 6.6149601 NA 9.9064915 NA 5.6205190 10.7962906 9.6058806 4.8649389 10.6803015 11.0390216 4.7274358 3.9200836 3.1217117 11.5430475 4.1217117 NA 5.0244172 NA 13.444725 4.326070 9.129534 12.677637 10.697500 11.400669 13.374586 12.388806 9.057584 10.101481 13.720333 8.041096 7.760544 9.549437 1.183137 7.790446 10.970746 10.4634991 12.2246601 7.1019778 13.2117630 9.2688000 1.5981746 8.8508179 7.8578958 10.0360241 3.7680784 5.2420079 10.4842301 6.3925682 -0.4018254 10.9399492 8.3158289 6.5494951 8.7364243 10.6298537 11.4549671 8.6301983 8.2898962 10.6726285 NA 14.3472507 10.9327051 10.7325788 10.7876682 11.4465798 8.7351437 9.1305085 10.4506820 7.6615472 -1.4020160 9.1744668 4.0244172 11.0254653 -0.4018254 11.1469744 1.7680784 10.8608052 9.9807765 7.4215196 13.8573073 10.0275592 10.0839819 12.4437405 10.3136855 NA -1.4020160 10.7646295 9.6288197 10.6988148 TCGA-AO-A126 39 0 NA 3307 breast stage iia t2 n0 (i-) m0 female 2002 NA yes infiltrating ductal carcinoma 0 asian not hispanic or latino 1 1 3 1 2 2 1 1 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.387189e-07 26.3157894736842 21.0526315789474 0 26.3157894736842 26.3157894736842 9.6439985 8.8237751 10.6397218 6.5043582 9.1676532 8.5338495 10.1602078 9.6742832 11.1426840 13.1082748 11.2040740 10.0893207 0.9808296 12.6707942 3.2438366 9.6311299 7.0767205 8.6375787 11.1975421 12.4256041 NA 14.9151322 5.6361490 10.2083545 10.3175260 6.4980721 -0.3411716 11.9713584 9.9268252 3.4137565 8.7209142 6.5353858 NA 3.1824381 8.1607054 10.0131176 8.9751498 10.9677760 8.8948823 10.1295271 8.0053820 10.6293336 14.8017131 6.1046281 10.8554703 10.3850863 10.6325655 4.9626508 5.0511850 7.1902494 10.0629453 0.2437909 10.7657582 8.1366267 5.5043598 3.6130601 9.0934965 12.1022003 10.6707942 11.5966098 12.2513252 8.5369190 10.8089327 10.1799779 10.6054090 10.4394080 1.9807931 12.1946295 12.7070144 1.4662356 10.5650071 8.7276465 3.7463343 4.2735756 10.4307702 9.4336553 10.0940175 9.3540964 5.2587827 6.7829890 12.9324453 13.7322148 10.2936792 10.6425743 0.00000000 0.00346870 0.00708260 0.00138680 -0.00097017 0.00541390 0.00138680 -0.00013862 -0.66467000 1.64290000 -0.01436600 0.00750000 0.00750000 0.60973000 1.71900000 1.69810000 0.00166420 -0.00443980 -0.00650500 0.00944910 -0.00124730 0.00499690 0.02567100 0.01474900 -0.00166290 -0.00166290 0.02370600 0.02006300 0.02763800 0.00000000 -0.02268100 -0.66716000 -0.00097017 -0.00097017 0.00541390 0.00541390 -0.00083160 -0.67884000 -0.01106000 0.00000000 0.00666530 -0.68479000 0.00666530 0.00666530 0.00666530 0.00666530 0.00750000 0.00750000 0.60973000 0.58524000 -0.66328000 0.00138680 0.00166420 0.01656500 0.01782400 -0.67481000 0.00944910 0.00944910 -0.00691950 -0.65482000 -0.65659000 0.02567100 0.00360760 -0.00166290 0.02370600 0.02006300 0.00610900 0.01880300 0.01880300 0.000 0.000 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.650 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.650 0.000 0.000 0.000 0.000 0.000 9.0882749 1.8287940 5.9162569 11.2144160 11.3872139 7.9796235 11.5591689 8.8686871 9.4914655 2.9067944 12.6953852 11.3888351 3.8683213 3.1182933 1.8287940 7.6895354 4.5896077 10.6676469 10.5650071 10.3343842 9.9085743 -1.3411716 7.9649300 10.6083301 5.9162569 3.5657556 NA NA 10.3268667 6.1587147 7.0682591 7.1018118 6.7195641 10.8885672 10.3027244 3.9067944 8.9488870 NA 7.7700038 13.2562806 9.6425743 9.3961156 -0.3411716 2.3592963 8.3952702 NA 4.7673953 2.3592963 5.2134562 7.4774507 2.7463343 10.3829556 1.2438518 7.3453689 10.3713952 9.7436765 5.9534888 10.6926353 11.4536902 7.8287934 4.1507221 3.3593103 10.8517774 4.3593103 0.2437909 2.2438214 0.6588284 14.677342 6.174568 8.498072 12.670794 10.474652 10.396960 12.425604 11.445342 10.100256 9.801613 12.540747 9.405383 7.190249 9.669396 1.466236 7.433656 10.368383 11.1007749 11.9914642 6.6922905 13.4261692 9.1038831 5.6475534 8.9431140 7.3312932 9.7819873 5.7569005 5.5777309 11.2040740 8.8111531 3.9807931 10.2864020 9.9355742 6.9610954 10.8089327 10.4479942 10.5552006 8.5121779 9.5821956 7.1426840 4.2134562 11.8532003 8.9751498 11.0070430 11.0075963 11.0885364 9.1785045 9.4262251 10.3188641 6.6013830 4.6588684 8.3862954 7.7167516 10.0629453 4.0511894 10.7657582 8.7791060 11.0535988 9.0934965 7.0120155 15.2760337 10.1646797 9.7810490 11.9900651 10.5207305 -0.3411716 -1.3411716 10.3072257 8.8325454 9.5732533 TCGA-AO-A128 61 0 NA 3248 breast stage iia t2 n0 (i-) m0 female 2002 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 2 3 6 1 5 5 3 3 NA NA 0 0 0 0 0 7 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 7 4 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 7 0 0 0 0 0 0 0 0 0 7 4 4 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 4 5 7 0 0 0 0 0 0 0 0 2.039168e-05 8.288455e-06 30.6413301662708 6.29453681710214 1.42517814726841 26.4845605700713 35.1543942992874 10.1534782 9.6981228 11.9582281 9.8126933 8.2163676 9.4950033 9.2051352 10.0891603 9.1964861 12.8144879 10.3641851 10.6114403 3.1627257 12.3712964 2.0252415 11.4021472 5.5612803 8.8564277 10.9537937 9.4626313 NA 7.7889917 9.3290067 9.7636786 10.6853407 6.3471536 -0.2967221 11.9065439 10.1165732 2.2882700 8.1803816 7.4648488 NA 4.6418986 10.6455680 9.8782235 9.3192341 10.3798427 9.6843894 12.4156099 1.4402612 7.0252260 14.7978842 8.4730364 9.5731488 11.2664942 10.7355733 7.4129559 10.4813750 9.3763125 11.5319633 NA 10.0398045 8.2566074 9.3973655 6.1126897 11.4123817 11.7478058 9.9994493 12.7203963 13.4060478 6.1897969 10.6834374 10.2677935 10.9166047 11.4832907 5.5277272 12.0505501 4.8048383 NA 10.8375102 9.7454132 3.0757893 6.8931219 9.7358029 10.6731640 10.2350042 10.6176830 1.7032779 6.4626315 13.0625899 11.8937399 10.3137076 9.3892147 0.7254600 0.7290500 0.2299300 0.4720400 -0.0142280 0.1923800 -0.0217840 -0.0157470 0.7262200 0.7262200 0.7038200 0.2379800 0.1613000 -0.0156040 -0.0156040 -0.0156040 -0.0124340 -0.0124340 -0.0040162 -0.0077482 -0.0849260 -0.0154660 -0.0154660 -0.0154660 0.0827650 0.0827650 0.4610900 0.2406200 0.2512100 0.2449800 0.0056919 0.2299300 -0.0142280 -0.0142280 0.1923800 -0.0164290 -0.0199270 -0.0157470 -0.0156040 0.4947600 0.2270000 -0.0212350 0.2358100 0.2356600 0.2356600 0.2471600 0.1613000 0.2494900 -0.0156040 -0.0156040 -0.0156040 -0.0156040 -0.0124340 -0.0136770 -0.0136770 -0.0040162 -0.0077482 -0.0077482 -0.0849260 -0.0124380 -0.0154660 -0.0154660 -0.0066432 0.2263800 0.4610900 0.2457500 0.2032000 -0.0136770 -0.0136770 0.232 0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.461 0.461 0.725 0.725 0.241 0.241 0.203 0.000 0.000 0.000 0.471 0.471 0.000 0.000 0.192 0.000 0.000 0.000 0.399 0.000 0.000 0.704 0.236 0.236 0.133 0.133 0.232 0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.461 0.461 0.725 0.725 0.241 0.241 0.203 0.000 0.000 0.000 0.471 0.471 0.000 0.000 0.192 0.000 0.000 0.000 0.399 0.000 0.000 0.704 0.236 0.236 0.133 0.133 7.7476922 NA 2.9763086 10.6404264 11.4115196 7.8916725 10.6757991 9.8110991 9.0725826 1.5777793 13.1153384 11.8887443 3.9512241 NA 2.6418928 8.8402889 5.9256909 12.6437950 11.2838705 11.2440717 9.1998188 7.0371988 8.5181472 10.7858905 8.9464718 2.1183265 0.4403144 NA 10.9157942 -0.8817732 6.8187752 8.2398687 5.6418986 10.0236547 10.8107329 6.3567407 10.8976444 3.1627257 7.3155517 11.8363330 7.6976515 5.3851204 0.9256957 0.1183597 8.0768883 3.8462526 1.9256957 NA 9.0652416 6.7574233 4.4221186 10.6443455 3.3662663 7.2424567 10.3259599 10.0158028 8.0652416 10.5090418 15.0872496 10.2898250 9.9037879 6.2110920 9.9228698 1.2882404 3.8732226 0.1183597 5.8048357 11.836531 7.886520 8.176327 12.371296 10.265222 11.037012 9.462631 5.703297 8.973204 11.033468 13.554429 10.044631 9.376313 8.415252 2.762200 7.401424 12.125538 10.759710 11.458881 1.577779 14.037941 9.058649 8.953596 7.688191 9.367449 10.445941 9.457072 5.866527 10.364185 7.583902 8.422116 11.068891 3.544597 8.637932 12.802098 10.897850 10.761966 8.535861 8.363888 10.792748 8.912751 10.598828 9.319234 10.727514 9.539348 9.686767 10.551921 10.591534 11.091495 9.091315 4.288263 10.126750 9.092478 11.531963 8.381604 10.039804 4.327788 11.730422 11.412382 8.378078 13.304833 10.672445 10.498796 13.152619 10.932517 5.205799 5.732237 10.690325 10.537506 9.553485 TCGA-AO-A129 29 0 NA 3286 breast stage iib t2 n1a m0 female 2002 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 3 3 4 4 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.150143e-06 7.282743e-07 13.2530120481928 26.5060240963855 3.6144578313253 30.1204819277108 26.5060240963855 9.8267202 8.4958706 10.9624383 7.9911828 9.4376196 9.2932718 7.9124499 10.5485170 12.0785166 12.4393255 10.3152982 10.1758699 1.6270465 11.5397502 1.7969715 10.8672430 5.9933709 8.5768747 6.8938342 5.5812428 0.6270465 11.4640844 8.0782592 10.7005870 10.7878648 6.8891425 0.6270465 11.8144000 10.6880815 1.4344014 8.7065326 7.3344074 -1.3729535 5.9668988 9.0321893 10.0736143 9.2518433 9.3727223 8.9136057 10.6221084 3.2709026 8.2269607 15.4158682 7.3367868 10.1973780 10.6043279 9.6666524 3.2709026 NA 9.1729777 10.2073065 NA 9.8193407 6.2343787 7.2082480 6.2044772 8.8316192 11.9395055 11.1444713 10.7527842 12.6429856 7.3100429 10.7303357 10.1269336 10.5150301 10.4950987 2.7145093 11.9910457 7.4756710 3.6714406 10.6768964 9.1338514 3.9856553 4.8364998 12.2029416 10.2564045 11.0616761 9.4559777 0.9489746 7.4756710 12.4322879 11.7691550 9.4520066 10.2171671 1.0979000 1.4562000 -0.0314960 0.5150700 -0.4161900 -0.2488500 0.3505500 0.1975600 -0.4781800 -0.4781800 1.2217000 2.4003000 -0.4689700 0.3544700 0.0139110 0.0139110 0.9308100 -0.1212100 0.2240700 -0.4506100 0.2978700 -0.2215800 -0.2768300 -0.2884500 0.0502500 0.1229900 -0.2544300 0.7583400 -0.3848100 0.0817550 0.0070826 -0.4438300 -0.2747600 -0.4687200 -0.4431000 -0.4431000 0.3505500 0.2113100 -0.0454990 0.0144700 0.3805400 -0.4781800 0.6597700 0.0670880 0.0670880 -0.4666400 -0.4553300 0.2099300 0.0891270 0.0139110 -0.1468200 -0.4941300 0.3779200 -0.4689700 -0.4689700 -0.4369400 -0.4621500 -0.4621500 -0.4854400 -0.1456700 -0.2215800 -0.2884500 -0.0153290 -0.4796500 -0.2403400 0.0301690 0.0511030 0.0663720 0.0680910 0.000 0.000 0.000 0.000 -0.444 -0.444 -0.428 -0.462 -0.463 -0.236 -0.236 -0.222 -0.222 -0.163 -0.163 0.000 0.000 0.395 0.395 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.392 -0.392 -0.240 -0.393 0.224 0.224 0.000 0.000 0.237 0.715 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.444 -0.444 -0.428 -0.462 -0.463 -0.236 -0.236 -0.222 -0.222 -0.163 -0.163 0.000 0.000 0.395 0.395 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.392 -0.392 -0.240 -0.393 0.224 0.224 0.000 0.000 0.237 0.715 0.000 0.000 0.000 0.000 9.6584045 NA 4.9845985 11.4664485 11.0493755 7.5078256 10.5848754 9.2311655 8.7420524 0.2120090 12.2994732 11.9529028 3.2709026 0.2120090 5.0864781 8.8254931 4.1506084 11.3888069 11.3277044 11.1729777 9.7250799 1.7969715 8.6958261 10.2834727 7.9467197 4.7563295 1.2120090 NA 10.9812973 3.7145093 6.9216684 9.1797170 9.5279146 11.5926807 10.9083984 3.1506084 9.8106833 1.2120090 8.0844289 13.2967081 8.0236529 7.7511691 -1.3729535 3.1506084 8.3869359 3.3819340 3.4344014 NA 6.8749752 2.8810381 5.9489769 10.7859731 4.0193639 10.3575180 10.5245153 9.7427419 6.2417582 10.0166792 12.5999380 9.0129103 6.0279281 4.5812428 9.6762157 -1.3729535 0.2120090 0.6270465 4.9845985 11.820254 8.261859 8.084429 11.539750 10.561844 12.079418 5.581243 10.485806 8.972453 11.124650 13.092359 11.190244 9.172978 9.295933 3.714509 7.693137 11.313111 10.569929 11.641243 4.533937 13.936163 8.975776 7.324016 8.440829 6.521866 9.315386 9.474888 6.166207 10.315298 10.303887 NA 9.760190 9.261859 9.303525 11.500300 10.481916 10.537316 7.727710 9.841367 7.799475 8.116896 10.899331 9.251843 10.102275 10.170080 10.673831 10.052264 10.787550 10.393163 8.270904 NA 9.837427 6.761474 10.207306 9.294159 9.819341 6.545911 10.819957 8.831619 8.082375 14.771567 10.393577 10.332248 12.353798 11.266615 6.962438 1.948975 9.654954 9.084429 8.820573 TCGA-AO-A12A 47 0 NA 3112 breast stage iia t2 n0 (i+) m0 female 2003 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 2 NA 6 2 3 4 5 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-07 1.387189e-07 27.2727272727273 36.3636363636364 0 9.09090909090909 27.2727272727273 11.3663521 10.0591706 11.6792280 8.8569368 8.2830782 9.1671399 10.0870430 9.4785844 10.3596244 13.3520653 10.8468163 10.5958120 3.2034988 12.5755534 3.7340050 9.8143827 7.2719747 8.7951208 10.8293386 12.7414319 6.5200702 14.2295312 6.4429601 9.8831519 10.5577848 4.9404581 -0.5513104 9.7089385 9.7682791 2.6965280 7.7973353 7.9202820 0.7705331 4.4028040 9.9755952 10.3400111 10.3711914 11.4797913 9.9979104 11.2219523 6.2299666 12.1316016 14.7592198 8.2229330 9.4401289 11.4554591 11.2679878 5.2299685 1.9080443 9.0660744 12.1548872 -1.5513104 11.4403060 4.4258889 6.4258873 4.5146967 11.0151368 12.0143042 10.9243404 12.8023052 12.7070258 7.4230218 11.3344940 10.8184770 11.1280871 11.0328650 4.5360716 11.5694929 10.8627637 -0.5513104 10.6325525 8.8290681 4.2575085 5.0335684 11.4654153 10.4974344 10.1236820 9.8690936 4.4709728 9.6941597 13.4552837 11.9973085 9.9711886 9.6689853 0.99717000 0.99717000 0.00000000 0.00000000 -0.18534000 0.29676000 0.06265100 0.06265100 0.00013863 0.00013863 -0.00747200 0.25652000 0.25652000 0.30075000 0.30521000 0.30521000 -0.00166290 -0.00166290 0.27395000 -0.00567570 0.07067300 -0.02288100 -0.02288100 -0.02288100 0.21991000 0.22854000 0.23055000 0.28612000 -0.21243000 -0.21243000 -0.17988000 0.00000000 -0.20737000 -0.23995000 0.29676000 0.29676000 0.06265100 0.06265100 0.06265100 -0.00221680 -0.00221680 0.00013863 -0.02151000 -0.02151000 -0.02151000 -0.02151000 0.25652000 0.25652000 0.30075000 0.30075000 0.31803000 0.30649000 -0.00166290 -0.00933220 -0.00933220 0.27395000 -0.00567570 -0.00567570 0.07067300 -0.36839000 -0.02288100 -0.02288100 0.31033000 0.21991000 0.22854000 0.27395000 -0.03558500 -0.35920000 -0.35920000 0.257 0.257 0.301 0.301 0.000 0.000 0.274 0.000 0.000 0.508 -0.368 0.000 0.000 0.310 0.310 0.229 0.229 -0.212 0.785 0.286 0.286 0.000 -0.359 -0.189 -0.189 0.000 0.000 -0.207 -0.207 0.297 0.297 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.257 0.257 0.301 0.301 0.000 0.000 0.274 0.000 0.000 0.508 -0.368 0.000 0.000 0.310 0.310 0.229 0.229 -0.212 0.785 0.286 0.286 0.000 -0.359 -0.189 -0.189 0.000 0.000 -0.207 -0.207 0.297 0.297 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3689599 NA 5.6965336 10.8350084 11.5195665 6.7542128 10.9638141 9.3848990 9.0166105 1.0335816 11.5180568 10.8351189 2.7705331 1.2559841 4.6384330 8.3734194 5.1351080 10.9573922 11.4808250 11.0734025 9.3419086 8.4834059 8.2703808 10.7273468 6.9243410 6.1697066 -1.5513104 NA 11.2667898 5.4486070 7.4115034 7.7637568 7.6359589 9.9192353 11.0205967 5.3434256 8.5120020 0.7705331 8.7626239 12.6388175 8.7761596 7.6677758 NA 2.0335816 8.5701407 1.4485838 4.7340105 -1.5513104 5.5881569 5.7795250 4.1490480 10.0447968 0.0335111 9.2987939 10.5344114 9.7258945 9.3637394 9.4758220 12.1911270 8.2233941 3.2559690 3.0924612 11.0756848 2.6185206 -1.5513104 2.1490317 2.2559539 13.5493523 5.0184606 8.5778899 12.5755534 10.7617735 11.2186514 12.7414319 11.8940099 9.0843253 10.6269606 13.4688491 10.9281347 9.0660744 8.4187128 0.4485838 7.4057091 11.2227764 11.2338551 11.9139183 6.8236462 13.3961919 9.3756442 6.6531776 9.5505827 8.2862348 10.8175635 6.8105511 8.8905139 10.8468163 5.7247321 2.2559539 11.1991047 7.3281902 6.7877002 11.9219323 10.5775680 10.8039581 8.7293777 8.7784034 11.9820584 5.9243398 12.2115195 10.3711914 10.5823914 9.8967234 11.2653907 10.7761597 10.3419086 10.6294486 9.2663902 1.0335816 9.3791892 6.8096292 12.1548872 6.2623881 11.4403060 7.0410644 11.0939998 11.0151368 6.9243410 14.1143316 10.0554748 10.5466391 12.9312890 10.7823215 2.5360778 -0.5513104 10.2093270 10.4009843 9.6929709 TCGA-AO-A12B 63 0 NA 2989 breast stage iia t2 n0 (i-) m0 female 2004 NA no infiltrating ductal carcinoma 0 white hispanic or latino 1 1 3 1 2 2 4 1 3 4 NA NA 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 3.467973e-08 33.3333333333333 8.33333333333333 0 16.6666666666667 41.6666666666667 9.7917353 9.3042420 11.1700881 8.0598084 9.2531679 8.8230551 10.7413059 9.4938683 9.7183142 13.0878985 11.0468900 10.8474318 0.7583032 11.7260790 3.2818763 7.6860901 7.4622160 7.2380923 10.3409248 13.7223824 3.3432799 13.8693257 -0.2416115 10.4598051 11.5624434 5.4862317 0.3432372 10.1029911 9.6394263 -1.2416115 7.7917353 6.5975163 NA 4.5396737 9.1048260 9.2749973 9.7889794 8.7370228 10.1414766 10.7586645 5.4021696 11.6875707 14.3456797 8.3437445 9.7681410 11.7535495 10.6378956 1.5656459 NA 7.8510694 9.2033272 NA 10.5908068 2.7583032 3.1506247 2.0802483 9.9823140 11.4046460 10.7519584 11.5281502 12.2285899 4.7583138 10.5943627 9.9786907 10.4311796 10.6006627 2.9282377 11.2688293 11.0920268 -0.2416115 9.5198636 8.5065052 2.3432657 4.5656703 10.2896937 10.1452525 10.3633288 9.3498348 -1.2416115 9.0204072 10.1772191 10.4280832 9.4448128 8.9943266 0.9513100 0.9532300 -0.0223380 -0.0239830 -0.0313650 0.9491400 0.4873300 0.4758000 0.4699100 0.4699100 0.4699100 -0.0191830 -0.0191830 0.4728900 0.4728900 0.4728900 -0.0318870 -0.0269940 0.4706600 -0.0250780 -0.0158700 0.4500200 0.4500200 0.4500200 0.4498500 0.4498500 0.4498500 0.4844000 -0.0213790 -0.0213790 -0.0084447 -0.0223380 -0.0313650 -0.0474910 0.9076000 0.9322200 0.4873300 0.4758000 0.4758000 0.4677500 0.4677500 0.4856000 0.0000000 0.0000000 -0.0045757 -0.0045757 -0.0191830 -0.0191830 0.4728900 0.4728900 0.4728900 0.4728900 -0.0269940 -0.0306830 -0.0306830 0.4706600 -0.0250780 -0.0250780 -0.0106520 -0.6084100 0.4500200 0.4500200 -0.0113420 0.4498500 0.4498500 0.4844000 0.4795800 0.4876700 0.4876700 0.000 0.000 0.473 0.473 0.000 0.000 0.471 0.000 0.000 -0.055 -0.560 0.450 0.450 0.000 0.000 0.450 0.450 0.000 0.951 0.484 0.484 0.480 0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.932 0.932 0.476 0.476 0.468 0.468 0.470 0.470 0.000 0.000 0.225 0.225 0.000 0.000 0.473 0.473 0.000 0.000 0.471 0.000 0.000 -0.055 -0.560 0.450 0.450 0.000 0.000 0.450 0.450 0.000 0.951 0.484 0.484 0.480 0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.932 0.932 0.476 0.476 0.468 0.468 0.470 0.470 0.000 0.000 0.225 0.225 8.7569029 NA 4.8457761 10.3651802 11.4167470 6.9583776 11.1581243 7.5516552 9.6462793 0.3432372 10.0431364 10.8582156 11.0514966 5.7695390 -1.2416115 6.8616006 1.9282377 10.1997003 11.9666991 10.9456644 9.0914677 6.3052063 6.4930212 9.4289685 6.2340452 3.2177425 2.5656703 NA 10.3181673 4.6162930 3.4587495 9.0959342 3.8027102 10.7097792 10.3172113 4.7125077 8.1549173 NA 5.1845778 12.9141583 7.8027063 8.5511026 -0.2416115 5.0981627 8.2877428 3.6162989 4.6162930 NA 2.7583032 6.8152206 -0.2416115 9.9036077 NA 5.2818725 10.8156272 9.5347454 5.0250997 9.0192318 12.8341257 6.9382211 -0.2416115 1.7583032 11.9679180 3.0802483 NA 2.7583032 0.3432372 13.671445 3.343280 8.384021 11.726079 10.084180 10.944117 13.722382 11.531658 9.431621 10.010978 12.588431 10.170353 7.851069 9.012160 1.080248 8.285789 11.007129 10.225918 11.694030 7.671201 13.700688 7.840461 8.718314 8.744154 8.986578 9.633893 5.665202 8.524841 11.046890 5.689050 -1.241612 10.099275 7.835128 5.793168 9.219792 10.239607 10.609671 9.062983 10.170882 9.788979 2.845771 10.712578 9.788979 10.058665 10.159725 11.993579 8.784836 9.412948 10.064374 8.742731 NA 9.246584 7.761128 9.203327 4.115866 10.590807 7.982314 11.763410 9.982314 6.635197 13.655543 10.796888 11.377845 12.963724 9.866183 NA NA 9.875306 10.003865 9.296501 TCGA-AO-A12C 42 0 NA 2372 breast stage iib t2 n1a m0 female 2005 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 1 1 NA 1 2 2 3 1 5 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.0078750 10.1028686 11.4830833 9.9640354 8.6445442 9.3640558 10.5375705 9.7323650 9.5997221 13.1125968 12.0430805 10.3645178 1.0777215 14.3771661 4.7330831 9.4014594 7.6106691 8.4440512 9.8991842 13.1420003 0.7558276 13.9700442 4.4562410 8.8406093 10.9689052 10.3089502 -0.2441724 10.4631601 8.9106190 4.1481206 8.0481228 7.5039934 0.3407332 5.0956502 10.3194739 10.0532904 9.3218551 12.0486977 9.9695127 11.7835342 1.0777215 11.6359584 14.9629869 8.4137269 10.1193773 11.2088143 11.3239946 4.8218888 5.5502173 9.6161121 11.4957925 -1.2443433 11.4832960 5.8850838 5.4422999 4.5631581 10.5127742 12.4031470 10.4981104 12.6125183 13.1929678 7.9846195 10.5094356 10.3819207 11.2421332 11.1045291 4.6626897 12.5180792 11.6951965 -0.2441724 10.2101002 9.0214162 3.5154854 5.1987456 10.7005131 10.7764338 10.4734774 10.0486977 2.0777215 8.3332296 12.6917027 11.8525161 9.9785959 9.4014594 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.6521333 NA 5.0595802 10.5914567 11.0595817 7.3152927 10.6600593 9.5155394 7.9304269 0.3407332 11.9826647 11.4338883 2.3407616 3.8001958 4.5371594 8.2090717 3.5631581 9.5264648 11.7779954 10.9074518 9.0202435 6.9257265 7.9181924 9.8359523 6.7892245 5.0777301 2.5631581 NA 10.6551579 7.8538329 7.4282262 7.4492882 6.5305874 10.7482932 10.8275985 3.3996633 7.5006348 -0.2441724 7.9030057 12.5954969 8.2070119 7.2910767 NA 7.1351798 7.5239853 1.9257336 5.8001958 0.7558276 2.6626840 5.2047002 1.5631581 10.4691875 1.3407901 8.4786087 10.3960459 9.9042776 5.3557140 9.2376005 11.8039472 8.1045290 2.4562279 2.8432603 10.9631204 4.2793599 NA 3.6626954 1.5631581 13.952019 4.483719 8.702707 14.377166 10.871170 10.345452 13.142000 13.206497 9.043652 11.034776 13.371603 11.345920 9.616112 8.796091 NA 8.355714 11.854491 11.3421716 12.3661338 7.5338779 13.6973952 9.4862711 5.0777301 9.4820191 6.4211374 10.6598861 6.3924256 8.6122264 12.0430805 6.4769001 5.6506181 11.3638247 7.2871823 5.2989882 12.1320620 10.2183032 10.8154834 8.4938931 9.3084701 12.4796752 5.9554732 12.4244899 9.3218551 10.8416054 9.9400565 11.4169110 10.2631002 10.7298570 10.7223064 9.1089478 NA 8.7201994 8.6163915 11.4957925 6.1904292 11.4832960 8.7642297 10.9789701 10.5127742 7.4044459 14.6110831 9.7430650 9.7063568 12.1388302 10.9131479 NA 0.3407332 10.2935048 10.5322340 9.9640354 TCGA-AO-A12D 43 0 NA 2515 breast stage iia t1c n1a m0 female 2005 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 3 2 4 NA 6 1 2 6 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7.976338e-07 2.427581e-07 16.1290322580645 61.2903225806452 0 19.3548387096774 3.2258064516129 10.2161091 10.0442155 11.9340639 9.7860322 8.0062913 9.2794028 10.5525368 10.5075222 11.6429025 13.8458367 9.4053987 10.8043710 4.1128252 17.6873361 4.6708177 9.1027678 4.6708177 8.5409490 7.0514210 12.6152112 NA 10.9714931 6.3691611 9.3618030 11.5167802 7.8285929 2.1128336 10.5217408 10.2921776 1.5278711 10.3544073 8.2580459 NA 6.2648254 9.8963653 10.1259114 9.9694198 11.0313534 9.9158761 11.0980308 12.3382966 9.9173109 15.2852662 7.8450001 9.7201517 11.0964484 10.7828874 6.4974846 3.8008792 9.0721795 12.8402692 -1.0570914 10.8426309 6.7566777 7.7340592 4.6708177 10.5174899 11.5334834 9.5740735 12.3862285 12.3171208 7.0566388 10.9425441 9.8072063 11.2622862 11.2137756 4.4664575 12.1049729 9.1178220 0.5278711 9.9180278 9.6197351 3.9674822 5.9981797 8.9173109 10.9180279 9.8669665 10.1620649 4.7757880 11.0954981 13.5562254 12.3709948 10.1265318 9.5993211 0.3477300 0.3651000 0.2400000 0.2700100 1.1696000 -0.0031859 0.0731150 0.0731150 -0.2554000 -0.2554000 0.7068200 -0.0077482 0.3391800 -0.0056757 -0.0056757 -0.0056757 -0.2504300 -0.0033756 0.2384500 -0.0012473 1.1255000 -0.1932500 3.6569000 -0.2256400 0.4307500 0.4307500 0.2050300 0.0063871 -0.0065050 -0.0065050 -0.0931390 0.2400000 -0.2579300 -0.2481200 -0.0031859 -0.0031859 0.0731150 0.0731150 0.0731150 0.2350400 -0.2684100 -0.2554000 0.0133530 0.0133530 0.0133530 0.0133530 -0.2511600 -0.2511600 -0.0056757 -0.0056757 -0.0056757 -0.0056757 -0.2504300 -0.0125860 -0.0125860 0.2384500 -0.0012473 -0.0012473 -0.2104500 0.0000000 -0.1932500 -0.2602300 -0.2443600 -0.2867900 0.2050300 0.0063871 0.4439200 -0.0265770 -0.0123000 0.000 0.000 0.000 0.000 -0.238 0.000 0.238 0.000 0.483 0.000 0.000 -0.226 -0.226 0.000 -0.244 0.431 0.205 0.634 0.634 0.000 0.000 0.706 0.000 0.458 0.458 0.240 0.240 -0.248 -0.248 0.000 0.000 0.000 0.000 0.235 0.235 -0.255 0.707 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.238 0.000 0.238 0.000 0.483 0.000 0.000 -0.226 -0.226 0.000 -0.244 0.431 0.205 0.634 0.634 0.000 0.000 0.706 0.000 0.458 0.458 0.240 0.240 -0.248 -0.248 0.000 0.000 0.000 0.000 0.235 0.235 -0.255 0.707 0.000 0.000 0.000 0.000 7.4585961 -1.0570914 5.9872913 9.5813322 11.2409589 5.3403557 12.7439984 10.4091666 8.2845710 NA 13.3600896 11.3165092 3.1128169 NA 2.6433252 8.1474675 4.3004459 12.2479606 11.6746397 10.5808797 9.1327210 NA 7.4936433 10.0520740 8.2443924 1.7502635 6.1228052 NA 11.1795086 2.8497791 6.6011081 8.1203156 9.0263757 9.8653321 10.5988742 3.1908203 8.6759115 NA 8.7598799 12.5226837 7.9173112 7.7275311 NA 6.3437756 8.4307365 6.1620650 2.8497791 3.3352117 7.0356536 5.1128210 4.2648216 10.6788754 2.7502420 10.4155872 10.8274485 9.5612818 6.0303582 10.2732530 14.2652471 8.8795342 5.6571426 4.6708177 9.8475310 3.1128169 NA 0.5278711 3.8497891 12.472937 6.914440 9.663995 17.687336 10.370733 11.036314 12.615211 11.205285 9.104028 10.154176 13.238522 10.597085 9.072180 7.759880 -1.057091 6.608233 12.022881 10.98181534 12.22134581 6.62939742 14.38713383 9.20028413 8.87067419 8.80553366 8.32660071 10.13781933 7.93441801 6.89126363 9.40539870 6.81326044 1.94290855 10.61929424 7.96526424 7.89032873 12.08388585 10.83202002 11.26115673 8.47622613 8.22366726 10.02437980 8.53722112 10.86629068 9.96941976 10.23809133 9.62413472 11.44199481 10.49460462 10.82821139 10.60778802 9.03565360 NA 9.70566038 7.59738889 12.84026915 9.53161091 10.84263092 8.56677787 10.88491961 10.51748988 6.95970409 13.47659111 10.27101031 10.52456777 12.48314550 10.96734350 -0.05709145 -1.94619356 10.98899719 10.43474945 9.14502015 TCGA-AO-A12E 51 0 NA 2142 breast stage iib t3 n0 (i+) m0 female 2005 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 1 2 1 2 4 2 3 4 4 4 NA NA 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 4 1 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.496534e-06 4.959201e-06 26.9922879177378 13.3676092544987 2.82776349614396 30.0771208226221 26.7352185089974 9.6477926 10.0444090 11.7287662 9.5021090 9.0023692 9.6038898 10.1841166 9.4707866 9.6220117 12.2595311 12.0266633 10.3052643 0.4500631 12.9509263 3.8005790 9.7661396 6.2880281 8.5927022 9.0529687 12.9700155 2.9355163 13.0363613 5.4500829 10.4912179 10.8408983 5.0229758 0.1281614 9.8203360 9.2366808 1.7131239 7.6038896 7.5916809 2.0350608 4.5711003 9.7988126 10.8834612 10.5185941 10.8003606 10.2016285 11.4777141 10.9006771 10.4193270 14.5313848 8.3329232 10.4250726 12.1341317 11.3230671 4.6673131 1.2980717 8.7854747 12.3263711 NA 11.3415644 5.9610468 6.2209142 4.4857102 10.2043039 11.6496341 10.4991162 12.3605023 12.9058226 8.3241436 10.3151990 10.1121332 11.0778007 11.2516312 4.6038874 11.1937408 9.9724698 -0.2868321 10.2248715 9.2149560 3.7170238 6.3473255 10.6423773 9.6482839 10.0142339 9.9423383 2.8830342 9.0845326 12.3756389 12.6399090 9.8229495 9.4042807 -0.0047773 0.4409600 -0.0074033 -0.0074033 -0.0033939 0.4731500 -0.0109910 -0.0186970 0.4504600 -0.0103020 0.4462300 -0.0021479 -0.0021479 -0.4757600 3.6569000 -0.0045007 0.4664700 0.4615200 -0.4912300 -0.0040857 0.0040934 0.4273000 0.4273000 0.4273000 -0.0312910 -0.0312910 -0.0517940 0.4526600 -0.0122310 -0.0047773 0.0000000 -0.0074033 -0.0033939 -0.0010770 0.4511300 0.4511300 -0.0109910 -0.0186970 -0.0186970 0.4397800 -0.0687300 0.0085436 0.0020108 0.0020108 0.0020108 0.0020108 -0.0021479 0.0010397 0.0011784 -0.4753800 -0.4837100 -0.4721000 0.4664700 0.4437800 0.4160500 -0.4764400 -0.0040857 -0.0040857 0.0040934 -0.4954300 0.4273000 0.4273000 -0.4710000 -0.0802080 -0.0517940 0.4526600 0.0134220 -0.4876900 -0.4876900 0.000 0.000 -0.475 -0.475 0.462 0.462 -0.476 0.000 0.000 0.458 -0.037 0.427 0.427 -0.468 -0.468 0.000 0.000 0.000 0.000 0.453 0.453 0.000 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.442 0.442 0.000 0.000 0.450 0.450 0.442 0.442 0.000 0.000 0.000 0.000 0.000 0.000 -0.475 -0.475 0.462 0.462 -0.476 0.000 0.000 0.458 -0.037 0.427 0.427 -0.468 -0.468 0.000 0.000 0.000 0.000 0.453 0.453 0.000 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.442 0.442 0.000 0.000 0.450 0.450 0.442 0.442 0.000 0.000 0.000 0.000 8.1657035 0.9355352 6.2156184 10.0384242 11.4534618 6.7317833 10.6987237 10.5809406 9.2935344 6.3278293 12.0270411 12.0841640 4.2980791 5.2156204 3.8286011 8.2142924 3.9861378 11.3438410 10.8998521 10.4657783 9.2202528 4.5544231 7.3996197 10.1132868 5.8216439 9.3363907 -0.8719706 NA 11.2443378 8.4170225 8.6846624 7.9419373 7.8979943 10.1377750 9.7827924 5.7131184 8.7364111 -0.8719706 8.0138525 12.0462742 8.3080655 6.9923424 -1.8719706 6.0350476 8.6634318 NA 5.2779029 0.7130799 3.2156165 6.6143079 3.1281614 10.4438720 1.5876050 9.6069259 10.0932191 10.0717700 5.5460085 9.8522438 13.4637909 9.2255302 0.7130799 2.7131239 12.7140578 NA NA 0.9355352 3.0823449 15.3490241 5.8830440 8.6536770 12.9509263 9.7707316 10.7848047 12.9700155 12.2614592 8.9698073 10.9045894 13.1839895 11.4313663 8.7854747 8.4019521 -0.8719706 7.2905479 11.0935799 10.8673041 11.2804412 7.1861479 13.9731776 8.1752801 5.6119720 9.0721364 9.7760645 10.1710947 7.0199398 8.3043294 12.0266633 7.1698158 2.2156165 10.8413281 6.1225091 7.2932647 11.3952356 9.9483353 10.7417156 8.2379872 8.8509638 13.5015313 4.7575140 11.9785835 10.5185941 10.8643469 9.3623750 11.6856201 10.0473921 10.5438981 10.7890436 8.9086961 NA 8.7986532 7.4478288 12.3263711 5.9483345 11.3415644 4.3376112 10.7380276 10.2043039 6.9924659 13.3523088 10.4253592 10.0402973 13.3276370 9.6726378 NA -0.8719706 10.4680063 10.4627090 9.4840580 TCGA-AO-A12F 36 0 NA 1842 breast stage iia t2 n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 3 4 NA 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 1.040392e-07 36 8 8 32 16 10.03304356 8.83281471 11.00942325 8.78909343 8.95753769 9.11456822 7.75541038 11.43117273 9.01370343 12.55642211 10.98104455 10.55299506 1.25217341 12.46647140 3.73019431 9.26258044 8.80124921 9.30820932 5.37553299 7.08504218 0.02970023 10.82255020 7.17950707 9.99966916 9.25134701 5.92053151 0.02970023 9.76841510 11.81016295 4.25215070 10.45672341 7.73941812 0.02970023 4.76672766 8.49055689 10.72208481 9.74457773 9.09315502 9.70454071 11.34641855 3.61472162 9.71684381 15.07977853 8.10757228 9.18542133 11.12735309 11.03561827 4.30277965 -0.55512094 8.64569590 10.29146301 NA 10.34453194 5.02976206 5.10301078 3.44479956 10.11766466 12.12515688 9.17781267 10.69953072 12.87014443 6.08142272 11.06616247 9.91113893 11.18921079 10.49736537 3.35168486 11.44796387 7.50007941 -0.55512094 9.58434866 9.72962142 5.20155545 5.08865469 10.40371253 9.50481780 10.50177370 9.40335018 2.14522094 7.65181160 12.10222746 12.58130793 10.31554732 10.00226103 1.4679000 1.7391000 0.0146090 -0.0114730 -0.3190200 0.0940560 0.0689520 0.0040254 0.0022193 0.0022193 0.9283700 0.5079400 -0.3695200 -0.6718700 3.6569000 -0.6724200 1.6323000 -0.3045100 -1.0522000 -0.3252800 -0.3928600 -0.0074720 0.0830540 0.0830540 -0.2710500 0.1692600 0.1692600 0.8826600 -0.6652200 -0.3207000 -0.3021600 0.0352420 -0.6521800 -0.3061600 -1.0373000 -1.0373000 0.0689520 0.9604200 1.0226000 -0.1963700 1.0629000 1.0857000 0.3580600 0.3580600 -0.6585400 -0.3042800 -0.3695200 -1.0688000 -0.6619800 0.3406400 -0.6756400 -0.6843300 1.6323000 -0.3045100 -0.3045100 -0.6638300 -0.3252800 -0.3339700 0.0356650 0.0632230 -0.0074720 0.0830540 -0.7053200 -1.1472000 0.1692600 0.1041000 0.0000000 0.1204900 0.1204900 -0.162 -0.670 -0.662 -0.662 0.335 -0.305 -0.664 -0.325 -0.661 0.000 0.000 0.000 0.000 0.122 0.122 0.000 0.169 0.205 1.540 0.090 0.883 0.000 0.120 0.563 0.563 0.000 0.000 -0.631 -0.324 -0.388 -1.037 0.000 0.000 -0.196 0.246 0.986 0.986 -0.466 -0.659 -0.321 0.152 -0.162 -0.670 -0.662 -0.662 0.335 -0.305 -0.664 -0.325 -0.661 0.000 0.000 0.000 0.000 0.122 0.122 0.000 0.169 0.205 1.540 0.090 0.883 0.000 0.120 0.563 0.563 0.000 0.000 -0.631 -0.324 -0.388 -1.037 0.000 0.000 -0.196 0.246 0.986 0.986 -0.466 -0.659 -0.321 0.152 6.8794252 NA 7.0184450 10.7846474 11.6919832 5.9714148 9.8451431 10.1353105 9.2788023 3.7301943 11.5405240 12.3553399 3.6147216 NA 2.8371157 9.5175999 3.4447996 9.4220774 11.4145436 11.0481919 9.7717885 0.4447731 9.2351459 9.5932740 6.4277905 7.1929901 -1.5551209 0.4447731 10.8160295 4.3516849 5.1452372 7.9083218 9.2096690 9.9072792 11.0764292 1.6147098 9.4980446 5.1030108 8.0184445 12.6326907 8.0241135 8.4177770 -1.5551209 7.1172223 9.1913117 0.4447731 4.2261540 NA 3.0297532 3.4447996 1.2521734 10.3531900 4.6346223 10.1163384 10.3116899 10.1799302 4.5322608 9.9406525 10.5549544 8.3027783 3.0886505 1.4447731 10.7893707 2.3516849 4.9993867 3.3516849 3.1452372 12.956016 7.966398 8.085042 12.466471 9.182045 11.418315 7.085042 11.071419 8.572792 11.241243 13.275511 11.539535 8.645696 9.114568 3.730194 7.604669 11.317087 11.1321730 12.2164932 6.1658959 13.8708282 8.9376119 4.3989933 9.2776875 9.1581838 10.3215598 4.3274431 4.6736186 10.9810445 4.9525898 -0.5551209 10.2521522 11.0936043 8.9742279 11.8365780 9.3606768 10.2042695 8.6046689 8.5467729 9.7995977 3.9993867 11.9857354 9.7445777 10.0127534 10.6727141 12.4733078 11.3940769 10.3658945 10.3546905 8.2245169 NA 8.9751550 9.3073882 10.2914630 4.8541902 10.3445319 7.6566858 10.3876783 10.1176647 6.7622106 14.5035489 10.2934203 9.9210373 12.8912992 11.0922558 -0.5551209 -0.5551209 9.6358567 8.9276052 9.6184745 TCGA-AO-A12G 75 0 NA 1639 breast stage iia t2 n0 (i+) m0 female 2006 NA no other, specify 0 white not hispanic or latino 1 2 4 2 2 2 3 4 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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12.0744091 12.4345240 8.6865005 10.9818527 10.5026329 11.0301153 10.6227840 4.5109619 12.2969162 13.2027360 1.0000000 10.4283602 9.9431008 2.3829439 5.1699250 11.2969162 9.7176764 10.2649117 10.7592224 3.3219281 5.9634741 12.5408061 12.2089659 9.6858000 9.6452982 0.49352000 0.55319000 0.01209700 -0.00249380 0.02946600 0.03608800 -0.00479970 3.65690000 -0.61911000 0.00402430 1.13400000 0.00555290 -0.61585000 -0.61623000 0.80150000 2.03930000 -0.00761010 -0.00761010 -0.21404000 0.00000000 0.01586600 -0.60381000 -0.01491600 -0.01491600 -0.01587900 -0.01587900 1.02640000 0.00972760 -0.00263220 -0.00263220 -0.00456950 -0.61652000 -0.26107000 -0.61460000 -0.00339620 0.00291330 -0.00479970 -0.00479970 0.00055459 -0.63538000 0.00833510 -0.61604000 0.00513590 0.00513590 0.00513590 -0.61393000 -0.61585000 0.03877100 -0.61623000 -0.02274400 -0.61403000 -0.61403000 -0.00761010 0.00434290 0.00434290 -0.21404000 0.00000000 0.00000000 -0.00121620 -0.61501000 -0.62436000 -0.01491600 0.01377200 -0.38694000 0.53186000 0.00972760 0.00680440 0.58112000 0.58112000 0.000 0.000 -0.593 0.000 0.000 0.000 -0.214 0.000 0.000 -0.615 -0.615 -0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.000 0.000 0.000 0.581 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.616 1.130 0.000 0.000 0.000 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 -0.214 0.000 0.000 -0.615 -0.615 -0.609 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.000 0.000 0.000 0.581 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.616 1.130 0.000 0.000 0.000 0.000 9.0168083 5.8579810 6.1043367 9.8417216 11.3171865 7.1400015 11.5843988 8.9724974 9.1158240 2.3785116 12.3544698 11.1863000 3.5849625 5.4059924 2.6780719 7.9020736 3.9634741 9.6191195 11.7301304 10.2455527 9.5156998 1.0000000 7.7004397 9.4237462 7.1538053 4.6088092 -1.3219281 NA 10.2244841 5.4594316 5.8579810 9.3219281 5.7333543 10.1020754 10.0345239 4.7224660 9.5180630 NA 6.9818527 14.1609429 6.2779847 8.7238316 NA 6.5728897 8.3575520 5.4724878 5.0703893 -0.3219281 5.0531113 5.2326608 3.5360529 10.8771307 NA 8.6667566 10.2488763 10.0927571 5.5849625 10.0378215 11.9633296 8.0617762 -0.3219281 3.6780719 10.8464306 3.4329594 -1.3219281 -1.3219281 NA 12.1296140 4.8073549 8.9068906 13.3924784 9.8041310 11.0476693 12.8543230 11.8044537 10.8083207 10.6340850 12.5867460 10.6308132 8.9212459 11.5605239 0.6780719 7.5391588 10.2728630 10.506605 11.935312 6.694880 14.410555 8.758889 5.867896 8.419539 7.965784 9.709546 6.392317 5.733354 10.746514 8.037821 1.847997 10.356232 6.104337 4.691087 11.056638 9.358431 10.805421 7.979568 8.268659 11.702519 4.847997 10.473994 9.148731 10.343852 10.151778 10.946614 9.691395 10.395320 9.806711 8.431289 3.584963 8.787341 6.700440 10.868514 5.523562 10.128252 6.177918 9.900867 10.432959 6.954196 14.560261 10.698705 10.523562 12.992443 10.161384 3.137504 1.263034 10.347400 10.294621 8.332708 TCGA-AO-A12H 69 0 NA 1234 breast stage iia t2 n0 (i-) m0 female 2008 NA no other, specify 0 black or african american not hispanic or latino 1 1 3 NA 2 2 1 1 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.387189e-07 35.2941176470588 17.6470588235294 0 17.6470588235294 29.4117647058824 10.36303185 9.72147144 11.72427987 8.42545301 8.52802309 9.12663608 10.73462385 9.81665266 9.23063702 14.21327456 7.96412192 11.01546893 NA 12.15968960 2.48362233 9.70051723 6.64409421 8.09487049 8.31204522 14.69948297 -1.21424023 14.81903560 4.95075301 10.04397969 10.72876201 8.95840829 -1.60384051 8.52283180 9.49419797 0.71808758 6.95075534 6.79277078 -0.60384051 3.15104699 9.52416028 10.03233741 10.56044442 9.46896854 9.64587203 10.77066216 -0.01887801 11.51947910 14.72364846 8.22714082 10.71046595 11.84505663 10.84737710 3.68157295 5.89601264 8.18895621 10.25686501 1.71808758 11.38626992 4.17752718 4.44056025 3.39615949 10.73907402 11.87909997 10.44737494 10.29816421 12.29164661 8.72484090 10.67083529 10.75128303 11.24889057 10.34234118 3.98113113 11.81954457 12.56507311 0.98112199 10.23615702 8.77770901 3.10269172 5.42958919 10.78794662 9.62438351 10.58011146 9.61412363 2.30305008 6.89202059 12.87638817 10.76930305 10.30942940 9.29098370 -0.00067168 -0.00829110 0.00210190 -0.00229840 0.03964100 0.00432350 -0.00219550 -0.00219550 0.01253700 0.01253700 0.01253700 0.00224070 0.00224070 -0.00191850 -0.00191850 -0.00191850 0.00099200 0.00099200 -0.01048700 0.00279590 -0.01131400 -0.00108740 -0.00108740 -0.00108740 0.00974910 0.00974910 0.00974910 -0.00510140 -0.00067168 -0.00067168 -0.01585800 0.00210190 0.03964100 0.03964100 0.00432350 0.00432350 -0.00219550 -0.00219550 -0.00219550 0.00738230 0.00000000 0.01253700 -0.01172800 -0.01172800 -0.01172800 -0.01172800 0.00224070 -0.01549400 -0.00191850 -0.00191850 -0.00191850 -0.00191850 0.00099200 0.00099200 0.00099200 -0.01048700 0.00279590 0.00279590 -0.01131400 0.00196310 -0.00108740 -0.00108740 0.00335130 0.00974910 0.00974910 -0.00510140 -0.00261090 0.00571330 0.00571330 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.41227789 NA 5.38485108 10.92364296 11.22052809 8.89773445 12.02198895 7.92885292 9.67679172 NA 11.82818584 10.10952237 3.82243444 4.30305739 2.56608449 8.65001344 4.37344637 10.76658092 11.29136257 10.50795376 9.73601592 -1.60384051 8.41575655 10.60287513 5.69078582 -0.01887801 NA -1.60384051 9.52480476 6.92754688 4.52544877 7.66529256 4.01087828 9.80255708 9.99328743 4.39616634 8.14938284 -0.60384051 7.44329003 12.82020101 7.98862277 8.18243557 NA 1.20351441 7.69766194 4.71809307 2.48362233 1.98112199 2.20351441 6.81228771 -0.01887801 10.32023622 NA 6.17095256 10.29401138 9.85713378 4.35036287 8.89401769 12.03912019 8.19868224 1.20351441 2.48362233 11.33886377 3.04001568 NA 3.78848735 1.20351441 13.444879 5.871900 8.874936 12.159690 10.669915 10.411232 14.699483 6.332805 8.789556 10.315774 12.673526 11.221721 8.188956 9.744341 0.981122 7.515107 13.277184 10.70734662 12.47139442 8.33427552 12.85225854 8.60318012 3.20351441 9.27345015 7.13763262 10.11248812 5.75371684 9.82347886 7.96412192 7.62978572 4.37344637 10.67345334 4.09660764 6.58554547 9.27037897 10.59706461 10.95793128 8.84634632 9.31577429 10.54241642 2.09659921 12.29946791 10.56044442 10.73490239 10.15937829 13.45977172 8.63457076 9.68156821 10.45043112 8.53187540 -1.60384051 8.58203243 5.70523425 10.25686501 2.09659921 11.38626992 5.49419797 11.58850810 10.73907402 6.75810993 14.29870597 11.04452356 10.33868046 12.38857329 9.56921840 NA -0.01887801 10.69250862 9.93968117 9.32690334 TCGA-AO-A1KO 46 0 NA 622 breast stage iib t3 n0 (i+) m0 female 2008 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 4 4 3 3 3 4 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 2.427581e-07 0 12.5 6.25 43.75 37.5 11.2492669 10.5444584 11.7438141 10.1375851 8.4998220 9.3098410 9.9375143 9.9051600 9.7149579 13.3055091 10.5295148 10.7086265 3.1752212 11.7593520 4.3510770 9.8217499 7.7354870 10.1495330 11.2196187 10.1133883 4.7953773 11.5986907 7.8591291 9.1918266 10.6154017 4.6297879 NA 7.3540281 8.8466018 4.3029770 8.7579590 8.9091815 3.1207832 4.0053012 10.5767362 9.9136922 10.1727178 11.8889612 10.7337871 12.4063569 9.2991544 9.4118590 14.1581126 7.9944575 8.6551547 11.8587391 11.9826988 5.4427047 2.2276795 9.8899789 13.6923836 -1.5794906 11.7948333 6.1885216 7.1033319 2.8797646 11.0162939 12.5224769 10.0313618 12.4375805 12.9599806 6.7377503 11.4100864 11.6105785 11.4870991 11.7725185 5.7149571 11.6830192 10.2630803 0.4202937 9.6929669 9.7729323 3.5128842 5.9121900 11.1414363 10.5001552 10.5707191 10.1951241 6.1345824 9.5196850 12.8730288 13.1104988 10.1789768 9.7674047 0.04188300 0.04188300 -0.00551010 0.05067700 0.00000000 -0.00346270 -0.00137600 -0.02411400 0.00319100 0.00319100 0.00319100 -0.00069303 -0.00107310 -0.00401620 -0.00401620 -0.00401620 -0.00512270 -0.00512270 -0.01064100 -0.00097017 0.00180300 -0.00373950 -0.00373950 -0.00373950 0.00277450 0.00277450 0.00277450 0.00221930 0.04188300 0.04188300 0.00360760 -0.00551010 0.00000000 0.00000000 -0.00346270 -0.00346270 -0.00137600 -0.02411400 -0.02411400 -0.00193990 -0.00193990 0.00319100 0.00362840 0.00362840 0.00362840 0.00362840 -0.00107310 -0.00107310 -0.00401620 -0.00401620 -0.00401620 -0.00401620 -0.00512270 -0.00512270 -0.00512270 -0.00719580 -0.00124730 -0.00124730 0.00180300 -0.01642900 -0.00373950 -0.00373950 0.00458000 0.00277450 0.00277450 0.00221930 -0.01739100 0.00388540 0.00388540 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.755727494 NA 5.049691750 9.453071607 11.689609911 6.149889350 10.359181593 9.871991304 7.317063430 2.943902578 10.783650549 10.118776944 3.464733605 3.064193062 4.724115437 9.094529299 4.064193062 9.554763423 11.355133685 10.678903170 8.907172194 1.879784171 7.793202062 10.450659382 6.315154998 7.234118063 0.005328121 -1.579490650 11.546718934 7.078548995 7.831848113 8.160117482 10.122942759 8.811580847 10.235320072 6.071389421 7.526245694 1.227679474 9.718399645 14.299034670 7.567542406 5.559889448 NA 4.590260676 8.313638584 6.265826923 3.327227468 1.742264967 4.590260676 5.727128116 4.549619889 10.238919265 2.120783224 10.354765089 10.554442464 10.093646133 3.812652241 9.340689995 11.286070351 8.153352397 2.327227468 2.668255307 11.626435714 -1.579490650 1.590242708 2.005292186 3.668266655 11.8338659 4.2016966 8.8190809 11.7593520 10.7153225 10.3875634 10.1133883 12.2871331 9.4749414 11.4998219 13.8083880 13.1507011 9.8899789 7.8169420 -0.5797063 8.3075579 11.3204491 10.979475142 11.064869382 7.016526405 14.303860792 8.979714134 7.605212808 9.444784245 7.737749621 9.897564148 5.920183712 6.481032481 10.529514790 3.943902578 6.742264967 11.449796887 9.327978990 6.374010058 12.898221827 10.951962258 10.665889792 10.371257507 6.590262173 12.220630354 6.497152469 12.248041020 10.172717769 10.252436002 9.279871937 12.322335289 9.729813430 10.558608883 11.190174938 9.215565032 NA 8.573965227 8.273365757 13.692383628 8.060581916 11.794833261 6.491800197 11.321483045 11.016293853 7.230909083 15.143838070 10.130282510 10.870259519 12.837991872 9.616324428 NA 0.005328121 11.117087343 10.716679814 10.268960070 TCGA-AO-A1KP 77 0 NA 2953 breast stage iia t1 n1 m0 female 2003 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 5 1 4 3 1 1 5 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.733986e-07 35 5 5 20 35 11.008460627 9.745565593 11.052143874 8.092135010 9.526975886 8.999843324 8.796479653 9.796479815 8.384666344 12.958253307 6.678849398 10.846437998 3.899243316 11.780795272 4.473475225 8.734938875 7.355753673 8.963892248 8.870910559 13.387525864 1.407407140 15.450883573 1.992333382 10.510713440 11.714587087 4.616839926 1.214746523 4.616839926 9.544377386 2.494850785 6.874992410 5.961975162 -0.007666618 2.577320055 9.524379905 9.732129428 10.895477433 11.380186624 10.422801383 11.710738946 2.494850785 11.189155799 12.845658342 6.926786991 8.979139057 11.667129553 11.395715934 4.515907950 7.459954501 8.984815181 11.049889312 0.407407140 10.972964426 6.271573210 4.384664618 2.577320055 10.610734292 12.796681518 10.631387987 11.900616314 13.194472611 8.564733311 11.481527766 11.354659759 11.703585549 10.141248973 4.028852006 11.492526748 12.669701409 -0.592701640 9.971059221 10.190793853 3.801417366 1.729313480 11.948240808 10.932907138 10.320649729 9.204237085 0.729356990 8.470781279 13.180628548 11.317091929 10.257573118 9.609510095 0.8356900 0.8265000 0.0105640 -0.0017050 -0.0114730 -0.0034627 0.0000000 -0.5684300 3.6569000 3.2569000 1.8325000 0.0289030 0.0421700 0.0082552 0.0136320 0.0136320 0.0114720 0.0114720 -0.0107840 -0.0208240 0.0689520 0.0979790 0.0979790 0.0801680 0.0626510 0.0626510 0.0626510 0.1661000 -0.8457900 -0.8685300 -0.0100820 -0.0017050 -0.0114730 -0.0198630 -0.0034627 -0.0034627 0.0000000 0.0000000 -0.0238400 -0.0123000 0.7987800 -0.8961800 0.0160290 0.0160290 0.0570830 0.0570830 0.0421700 0.0421700 0.0397610 0.0136320 0.0136320 0.0178240 0.0114720 0.0114720 0.0114720 -0.0107840 -0.0208240 0.0162860 0.0689520 -0.8620000 0.0979790 0.0801680 0.0109820 0.0626510 0.0626510 0.1661000 0.0086135 -0.8413900 -0.8861900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.273 -0.866 0.000 0.000 0.000 0.000 0.000 0.000 -0.869 -0.122 0.166 0.166 0.000 -0.841 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.795 1.691 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.273 -0.866 0.000 0.000 0.000 0.000 0.000 0.000 -0.869 -0.122 0.166 0.166 0.000 -0.841 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.795 1.691 0.000 0.000 0.000 0.000 9.363036125 NA 7.378929459 10.422801383 10.799435355 7.477587480 9.442872810 9.134864453 8.385953833 NA 11.339785603 10.400873140 1.577295882 0.729356990 4.214738753 8.995163947 3.407379946 8.521128493 11.296700130 11.615315732 10.221968769 0.729356990 7.795403320 9.747236328 3.992351511 2.314290484 -0.007666618 NA 10.092134878 5.808266623 7.214741667 7.415815274 8.582312121 9.789469904 10.923332463 1.866828870 7.426976700 0.407407140 7.992348679 11.963053891 9.615010681 6.227565887 -1.592484088 4.494850785 8.896230670 1.407407140 1.866828870 1.214746523 1.729313480 5.693804734 NA 9.960055380 NA 5.645790989 10.621705385 9.999376012 2.866809092 9.186284876 11.334423470 6.086866546 3.764940573 3.265361879 13.586634520 1.577295882 NA 2.214746523 NA 13.605234 5.764938 9.263812 11.780795 10.035914 11.155579 13.387526 11.239881 9.145479 10.500143 13.396736 10.561571 8.984815 8.757220 1.992333 8.011013 12.286395 10.769330084 11.541331204 7.579813723 11.842142214 8.724798953 3.451778186 9.928005013 8.755007722 11.073079728 1.992333382 4.850329381 6.678849398 6.786764928 3.961975162 10.798361306 7.988586989 6.717317247 9.055743916 10.475156744 11.006369282 10.045822172 7.518521763 12.019333230 3.214746523 14.631286186 10.895477433 11.232941367 10.290793223 11.434255518 8.365939193 9.425586445 10.606445097 8.060231169 NA 8.227836362 8.494849186 11.049889312 3.314275980 10.972964426 6.332199500 10.250914807 10.610734292 6.747235656 13.510469159 9.897735813 11.212525567 11.489036141 9.769878166 -0.007666618 3.214746523 10.441153423 9.736621955 10.654423726 TCGA-AO-A1KQ 84 0 NA 1882 breast stage iiib t4 n1 m0 male 2006 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 1 1 1 2 1 1 2 4 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.10538187 9.21485044 11.15097581 7.20772597 10.51770127 9.62365602 9.56167344 10.17765623 9.61739694 13.24959296 11.42475191 10.59481920 3.28648199 12.50710030 3.28648199 8.80217997 7.24995440 8.89824282 10.71484033 12.86438098 3.13448382 14.12138566 0.96458346 10.70135984 11.04503649 6.47234642 -0.03549047 8.72776427 10.37765097 0.54952132 6.86541903 6.01983533 NA 3.96455574 7.27289101 10.73232271 9.36969352 10.02592328 9.32868659 10.65236513 4.48811649 11.32347793 14.05313327 8.72488931 9.64930073 10.70896548 10.94968243 3.28648199 3.96455574 8.15437663 10.04536952 -1.03534261 10.70854490 5.53440717 6.57188307 4.24995346 9.56167344 11.70580835 10.16483768 11.26290108 12.47679867 7.96736692 11.11112073 10.61335899 10.81552019 10.13885363 3.35687624 11.98709326 9.09640893 -0.03549047 10.76423841 8.85177277 2.56149722 4.32210121 10.60162967 8.83645722 11.02254377 9.80217997 7.38661698 9.01167593 11.26175493 11.24908702 9.99659777 8.92020188 0.4406700 0.4595200 -0.4349100 0.1160500 -0.1179100 -0.3914300 -0.0357550 -0.5087000 0.5166000 0.6355000 2.3174000 0.0944550 0.1200200 0.1101900 0.0448210 0.0448210 1.0518000 1.1940000 -0.8556100 -0.0221420 0.2068300 -0.4229000 0.7150400 0.7150400 -0.2272300 -0.2272300 0.6933000 1.2627000 -0.3632000 -0.3632000 -0.4154500 -0.4307500 0.3726100 -0.0531050 -0.0849600 0.4579800 -0.0357550 -0.5087000 0.1017000 0.3930900 -0.0091634 -0.3264900 -0.3874200 -0.3874200 -0.3874200 -0.3873000 0.1200200 0.1861200 0.0270500 0.0448210 -0.4366100 -0.4366100 0.0443960 -0.1756600 0.2002600 -0.4838900 -0.4246500 -0.4246500 -0.2330300 -0.5156100 -0.4229000 0.7150400 0.2511700 -0.0044397 -0.2272300 -0.1532700 0.0166700 -0.4111600 -0.8970400 0.000 0.000 0.000 0.000 0.653 0.122 -0.484 0.000 -0.233 0.136 0.136 -0.423 0.690 0.251 0.251 -0.223 -0.223 -0.363 0.460 1.147 1.263 0.000 -0.414 0.000 0.000 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 0.393 0.393 0.635 0.635 -0.387 -0.387 -0.142 -0.142 0.000 0.000 0.000 0.000 0.653 0.122 -0.484 0.000 -0.233 0.136 0.136 -0.423 0.690 0.251 0.251 -0.223 -0.223 -0.363 0.460 1.147 1.263 0.000 -0.414 0.000 0.000 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 0.393 0.393 0.635 0.635 -0.387 -0.387 -0.142 -0.142 8.52870141 NA 5.78473168 10.80414950 12.29882534 8.07229234 10.44786399 6.74164360 9.34374625 -1.03534261 11.61582801 12.20894264 5.30440152 0.54952132 1.96454650 7.69926150 4.35686920 11.25687367 11.85443621 10.78193545 9.73851538 -0.03549047 8.97017666 10.40697728 6.75245424 6.79744235 1.54952132 NA 10.43215758 5.69247184 5.71944085 8.49593335 4.77190670 10.40844874 10.29378774 2.87144942 9.71525900 NA 5.62276347 11.72277526 9.37923734 8.05994900 -1.03534261 2.42398148 8.85329521 2.54952132 2.96454650 NA 6.83491722 5.09465834 1.54952132 11.37923729 -0.03549047 9.58660395 10.59254178 9.74509175 5.39081555 9.34825632 13.00132664 7.92744791 4.32210121 4.94183405 11.08996550 7.75571481 NA 2.77190670 2.42398148 14.2815869 4.9418340 9.2242952 12.5071003 9.1307152 11.1187372 12.8643810 12.1626901 9.0860855 10.4964208 12.6411703 11.3237525 8.1543766 8.6873596 0.9645835 8.0144005 11.3892432 10.33959150 11.95128293 6.06258371 12.57361185 8.74753376 7.04670059 8.72444018 10.19577328 9.37645492 6.94183170 8.05201478 11.42475191 5.67879871 3.28648199 9.80375577 6.65803863 8.47677901 8.90266151 9.80533003 10.29041957 9.24416258 9.87669282 8.22899469 6.16422513 13.24446943 9.36969352 10.67793858 10.51144649 11.22576548 9.20056615 10.40542125 10.03735463 7.33959172 NA 8.60490529 8.45576366 10.04536952 6.82873820 10.70854490 7.13447663 10.31106574 9.56167344 7.04136785 13.72027419 10.62008279 9.91218892 12.30105860 11.11048416 2.42398148 -0.03549047 9.88192412 9.03064121 8.56446506 TCGA-AO-A1KR 51 0 NA 2513 breast stage iia t2 n0 m0 female 2005 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.525908e-06 6.589149e-07 9.375 14.0625 7.8125 42.1875 26.5625 8.4366628 7.9590131 10.5026688 6.5178867 10.3863599 9.1847261 9.5809864 10.1098525 10.8976128 11.9492851 11.1072302 9.7730014 4.2272097 12.9441514 2.5897875 10.1133415 7.2653450 8.6866409 8.1341003 6.5073174 NA 11.8596854 8.5231424 10.5986625 10.9056838 3.8792843 NA 9.2175160 11.7335879 1.0048250 8.5283791 7.0123117 NA 3.2272020 6.2400338 9.0726994 9.0400743 9.5935317 8.6244256 10.2708227 6.3505927 7.8627979 14.2169587 6.6381521 9.4156216 9.8955880 10.6977231 6.1880389 4.6677843 8.7190626 11.9739637 0.4198625 10.4429157 2.5897875 5.2527449 2.2272174 8.7350042 12.1611108 10.1613215 11.7270553 11.9744434 5.8955886 10.8040987 9.3942691 9.5809864 10.4394453 2.4198625 11.8369159 7.6438562 NA 10.6176856 8.6022490 5.3027431 2.7417905 11.8249960 9.1306609 11.3047882 7.8078720 NA 6.8292458 11.2723840 14.1192643 10.5119510 9.9286396 0.93752000 0.93549000 -0.00761010 1.14400000 0.00000000 1.09560000 -0.17398000 0.38982000 -0.34102000 3.65690000 3.65690000 0.30170000 1.16980000 -0.30500000 0.00027728 0.00027728 2.02750000 0.01126100 -0.34169000 -0.31622000 -0.02068700 -0.34343000 -0.02315500 0.33869000 0.21024000 0.21024000 0.23876000 0.07685400 -0.00968060 -0.28988000 -0.06356900 -0.33699000 -0.02534600 -0.36170000 -0.32530000 -0.32158000 -0.17702000 0.02286500 0.33804000 0.01377200 0.27789000 -0.34102000 0.10191000 -0.31494000 -0.31762000 -0.32426000 -0.00747200 -0.03054000 0.08319800 0.00027728 -0.01491600 -0.01491600 0.39621000 0.01126100 0.01126100 -0.31190000 -0.31622000 -0.31622000 0.60955000 -0.29756000 -0.34343000 -0.33272000 0.02104300 -0.35396000 0.22314000 0.00958830 0.04089200 0.03778200 -0.00581400 0.183 0.000 0.000 0.000 0.000 0.000 -0.312 -0.316 -0.294 0.000 0.000 -0.324 -0.324 0.000 0.000 0.000 0.210 0.000 0.900 0.000 0.000 0.000 0.000 0.569 0.000 0.000 0.516 0.000 0.000 0.260 -0.322 -0.137 -0.137 0.314 0.314 -0.137 0.204 0.000 -0.311 -0.315 0.150 0.183 0.000 0.000 0.000 0.000 0.000 -0.312 -0.316 -0.294 0.000 0.000 -0.324 -0.324 0.000 0.000 0.000 0.210 0.000 0.900 0.000 0.000 0.000 0.000 0.569 0.000 0.000 0.516 0.000 0.000 0.260 -0.322 -0.137 -0.137 0.314 0.314 -0.137 0.204 0.000 -0.311 -0.315 0.150 7.4966701 2.2272174 4.0048160 11.9169579 12.2374378 7.6274055 10.7069897 6.2667247 9.6149437 NA 11.1289383 11.2707406 4.8461172 NA 1.0048250 8.9256660 2.8792941 10.8324244 11.0118443 10.8596854 10.2879053 3.6677786 9.6280888 10.7597045 5.5491362 2.5897875 3.5073126 -0.5801375 8.2902193 1.7417905 5.4198557 8.8976129 10.2778355 11.5059144 10.6778316 1.4198625 10.6305259 5.6293071 7.4805503 12.9706013 9.3841953 7.8751817 NA 3.3267387 8.4805503 5.2527449 3.1203022 0.4198625 5.1477748 4.1202939 3.1203022 11.3457798 6.7052564 9.8271223 10.3513307 10.3483729 5.1477748 11.0446500 12.1065739 5.9897112 4.8461172 3.8792843 10.2408312 -0.5801375 2.2272174 NA 3.8792843 11.509047 9.645062 7.691318 12.944151 9.834540 11.702653 6.507317 7.639023 8.974443 11.847429 13.047616 11.046932 8.719063 8.663029 2.419862 8.137531 9.814317 10.2598456 11.6513757 1.4198625 13.5968800 7.8996349 5.8792867 8.9097026 7.9434162 9.0089065 5.1477748 4.4198557 11.1072302 10.4056964 NA 9.3755043 9.5465590 8.4901096 8.3476324 8.3267450 9.5759376 9.1946416 9.5606842 4.3267459 5.2012143 11.6449625 9.0400743 10.0771730 11.0327230 11.2832665 9.4601442 9.3856388 10.3870807 6.3387186 NA 9.4108662 7.1613214 11.9739637 7.1880389 10.4429157 4.3740518 11.1575244 8.7350042 7.4642484 14.7721394 10.4177397 9.9906589 11.7224934 12.0605514 NA -0.5801375 9.5696016 8.0382403 8.8419194 TCGA-AO-A1KS 69 0 NA 350 breast stage iia t2 n0 (i-) m0 female 2010 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 2 1 2 1 1 1 9 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 4.508365e-07 29.7297297297297 37.8378378378378 2.7027027027027 8.10810810810811 21.6216216216216 11.393520 11.094669 11.919023 9.687531 8.544814 8.120384 9.640515 10.876413 8.597464 12.825757 12.285541 11.130628 4.402709 12.208552 4.972564 8.356904 6.866232 9.060919 12.168097 14.072450 3.210062 13.954235 5.368492 9.036611 11.864187 7.955376 NA 5.222886 10.499093 1.724650 7.882488 6.961128 12.906036 3.612164 11.164466 11.662156 10.333445 11.770122 11.080207 12.477016 11.768620 12.183247 13.003375 8.150934 8.855978 11.053759 12.801651 4.075130 5.447100 9.932138 11.811037 -1.597278 12.261660 5.511231 6.733624 3.210062 11.297146 12.516368 10.037065 11.501068 12.728575 7.032063 11.947068 11.474930 11.568870 10.992826 5.592532 12.248295 12.311850 NA 9.516449 9.717857 2.491879 6.260688 7.920377 10.609722 10.580438 10.789647 6.799311 9.865721 12.901120 12.242206 10.476179 9.078664 0.336260 0.367720 -0.153110 -0.075478 -0.168150 0.184340 0.198930 0.162800 0.414460 0.414460 1.794700 0.272530 0.272530 0.619330 0.619330 -0.612420 0.231170 0.231170 -0.160390 0.678570 -0.703970 -0.608440 0.306010 0.306010 0.176790 0.176790 0.176790 3.656900 -0.553170 -0.553170 -0.518050 -0.607190 -0.168150 -0.177460 0.184340 0.184340 0.198930 0.162800 0.162800 -0.108150 -0.108150 0.414460 -0.166250 -0.166250 -0.459660 0.429230 0.272530 0.272530 -0.629600 0.619330 -0.612420 -0.630080 0.231170 0.231170 0.258550 -0.187730 0.080974 0.103370 -0.150550 -0.597010 -0.608440 0.306010 0.137170 0.176790 0.176790 0.285280 0.095798 -0.453290 -0.453290 0.273 0.273 0.007 -0.612 0.231 0.231 -0.188 0.000 -0.151 0.328 -0.269 -0.608 -0.302 0.137 0.137 0.177 0.177 -0.553 -0.217 0.144 -0.141 0.000 -0.453 -0.519 -0.519 -0.578 -0.578 -0.168 -0.168 0.184 0.184 0.163 0.163 -0.108 -0.108 0.414 0.994 -0.166 -0.460 0.000 0.000 0.273 0.273 0.007 -0.612 0.231 0.231 -0.188 0.000 -0.151 0.328 -0.269 -0.608 -0.302 0.137 0.137 0.177 0.177 -0.553 -0.217 0.144 -0.141 0.000 -0.453 -0.519 -0.519 -0.578 -0.578 -0.168 -0.168 0.184 0.184 0.163 0.163 -0.108 -0.108 0.414 0.994 -0.166 -0.460 0.000 0.000 7.4139342 1.5726472 7.9592132 9.6458812 11.7329239 4.0227051 9.9553763 7.6970982 7.1828532 3.3095982 11.0874558 10.2661191 2.2100771 -1.5972778 2.8621340 9.4613755 2.4901593 8.1741967 11.7909936 11.3356601 9.2228862 1.2100771 7.6553726 9.6351282 5.8456506 4.6121578 NA 1.5726472 10.1926484 8.4606987 8.8342049 8.5600542 7.9782465 8.8774271 11.4268080 4.5925288 7.1575945 3.2606881 7.2481970 12.4027953 7.1169531 5.8120977 0.7246503 5.1575935 8.0447591 NA 1.8621538 -1.5972778 5.6694945 4.9760520 1.5726472 10.9872000 NA 8.3245483 10.6109416 10.2715298 3.6881132 9.2076450 12.9752890 8.6541895 4.7246339 2.3095837 11.7887044 2.4901593 NA NA 1.2100771 14.182059 6.858034 8.864187 12.208552 9.560143 10.786681 14.072450 11.768073 8.618240 11.629119 12.987846 10.882235 9.932138 8.035703 1.724650 7.812098 13.403455 11.195701 11.101195 7.482192 12.469468 9.281524 6.345222 9.959213 9.842019 11.285259 4.531993 9.054656 12.285541 5.130626 NA 11.453406 5.631526 8.146330 11.455105 10.685217 11.324734 9.993762 5.333445 12.844484 5.886523 13.957696 10.333445 10.930917 10.198747 11.952011 9.263018 10.956097 11.025217 9.174197 10.702488 7.823720 7.727878 11.811037 4.333445 12.261660 6.799311 10.601459 11.297146 7.306589 13.107259 10.006797 10.233222 12.660463 11.019486 1.402722 -1.597278 11.304140 10.978955 10.050166 TCGA-AO-A1KT 78 0 NA 541 breast stage iia t1 n1 m0 female 2009 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 1 2 1 2 1 1 5 6 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 4.855162e-07 27.027027027027 10.8108108108108 5.40540540540541 21.6216216216216 35.1351351351351 10.5616938 9.0959344 10.8274997 7.4926239 9.2116557 8.6713532 8.1085621 9.5034219 10.0581886 14.5982134 10.6499161 10.2334381 3.1241958 12.8947143 1.2662168 10.3292698 5.3642432 9.2941178 6.3160606 12.4387175 2.7897710 14.2688950 5.9666519 10.2520538 11.3480281 6.5329979 1.9666519 10.1613743 11.0397632 2.3536620 8.1427289 7.2233135 -0.7338431 3.1730954 9.6254122 9.9596987 10.6769281 10.2323568 8.6270589 10.9082635 8.2101916 7.8772369 15.0514983 6.8858818 9.1587546 11.2171322 10.5881400 4.4159614 5.0735675 8.3010109 9.4817447 0.2661569 10.7371249 8.1210802 5.7500276 4.6924774 9.5545012 11.5788112 10.5651336 11.6103690 12.3867737 8.5756882 10.3925937 10.1591492 10.7961303 10.1093478 3.8208019 10.9787388 11.9510700 -0.7338431 10.5303612 9.5277192 1.8523585 5.6325329 11.1203010 9.3187798 11.0530940 9.8398590 5.0735675 8.0895792 12.1716928 10.9896595 9.8707651 9.1700936 0.4665600 0.4665600 0.6318900 0.0000000 -0.1723400 -0.0060904 -0.2396000 -0.6922400 3.6569000 -0.7239400 1.2492000 0.0224440 0.0224440 0.5768300 3.6569000 2.5441000 0.0046278 0.0046278 -0.7230500 0.0119580 -0.1924900 0.0234260 0.0234260 0.0234260 -0.7191500 -0.2360600 -0.2360600 0.6814300 -0.7330100 0.0343140 -0.1894900 0.0000000 -0.1723400 1.0015000 0.0196430 0.0196430 -0.2396000 -0.6922400 -0.6922400 0.0061090 0.0061090 -0.7345900 -0.2165600 -0.2165600 -0.2165600 -0.2009900 0.0224440 -0.7233200 0.5768300 -0.7377500 -0.7117600 -0.7117600 0.0046278 0.0137720 0.0137720 -0.7230500 0.0119580 0.0119580 -0.1924900 -0.7419400 0.0234260 0.0234260 -0.5177400 -0.7191500 -0.2360600 -0.7253500 0.4403700 -0.0026322 -0.0026322 0.000 0.000 -0.145 -0.722 0.000 0.000 -0.723 0.000 -0.192 -0.323 -0.706 0.000 0.000 0.447 -0.518 -0.719 -0.236 0.000 0.432 -0.725 0.626 0.416 0.000 -0.189 -0.189 0.000 0.000 -0.172 -0.172 0.000 0.000 -0.166 -0.692 0.000 0.000 -0.704 0.545 -0.217 -0.217 0.000 0.000 0.000 0.000 -0.145 -0.722 0.000 0.000 -0.723 0.000 -0.192 -0.323 -0.706 0.000 0.000 0.447 -0.518 -0.719 -0.236 0.000 0.432 -0.725 0.626 0.416 0.000 -0.189 -0.189 0.000 0.000 -0.172 -0.172 0.000 0.000 -0.166 -0.692 0.000 0.000 -0.704 0.545 -0.217 -0.217 0.000 0.000 8.6702891 NA 8.1640571 10.3436952 11.6785170 6.2690275 10.1549550 8.6244895 8.3754809 NA 12.3737559 12.2938803 3.8208019 -0.1488007 2.2662168 8.4621992 3.8511693 11.1986112 10.7274354 11.1475170 9.8873480 0.2661569 7.9649167 10.0811947 5.9527133 2.0735803 2.7256539 NA 10.9588273 7.3642441 6.2204074 7.3747361 5.8360680 9.6834473 9.8150337 0.2661569 8.4336301 NA 7.0573745 12.7935055 7.9262076 7.4260836 -1.7336032 -0.7338431 8.6945721 4.2885800 4.7256430 NA 3.5141349 3.1850736 1.9666519 10.9379740 -0.7338431 6.1791010 10.7345813 10.2323568 4.4950299 8.9649164 11.6949646 8.4609686 3.2662168 4.5516144 10.7037038 3.0211066 -1.7336032 NA 2.5141475 15.3741908 6.6237645 9.0606276 12.8947143 9.5556544 11.3289326 12.4387175 10.7018821 11.2817419 10.3146987 13.2407161 11.0753771 8.3010109 9.0068357 0.5881329 7.4805309 10.8994341 10.9279899 12.5409540 3.3536762 13.8655706 9.0855925 4.8053699 9.3838550 9.0076788 9.8726910 5.9527133 4.1241958 10.6499161 6.9907257 4.0210977 10.3453632 5.5971289 8.0383122 10.7687950 9.9302146 11.1627335 9.2571738 9.2021135 9.4229270 5.3214952 12.1373018 10.6769281 10.6803685 9.0951417 10.1457951 9.2913515 10.8563310 10.5165102 7.4336297 -1.7336032 8.7226382 7.8471864 9.4817447 5.7897736 10.7371249 7.6477549 10.7389027 9.5545012 7.1148345 14.3971041 9.9275447 9.4835637 12.5758303 9.7174230 0.2661569 2.0735803 10.3221721 10.0198464 9.5728433 TCGA-AQ-A04H 61 0 NA 754 breast stage iiia t2 n2a mx female 2009 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino 1 1 1 2 NA NA 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.629947e-06 5.201959e-07 40.3225806451613 11.2903225806452 6.45161290322581 24.1935483870968 17.741935483871 10.1576342 10.0521744 12.2566007 10.3153419 8.4559876 9.1460821 11.4424939 10.3781697 10.6672998 14.6369206 12.2585920 10.9091499 -0.1818039 14.9680480 3.6255160 7.9318975 7.3233052 8.4727916 8.7300465 13.3696634 NA 14.2861429 0.2331518 9.4921945 11.1628211 7.4426458 -0.7668482 7.6782079 10.3933794 1.9336482 9.4365408 6.7606694 3.6926281 5.1520576 10.3133442 10.2789525 9.5523004 9.7220371 10.4571945 11.4233262 NA 11.2243604 15.2740391 9.1165997 10.1165999 11.5018811 11.8331057 4.0405506 NA 10.6518361 9.7385083 -1.7666027 10.3328694 3.9336293 4.7877824 5.2666142 10.7142354 11.8796391 9.3553738 11.1402713 12.8270508 8.2303721 10.5885439 10.2951479 11.1297145 11.1114354 5.2331940 14.9587988 11.6095896 NA 10.5819210 9.0461723 1.8193412 4.7723502 10.6732834 9.5802605 10.3685815 10.3615095 1.5551290 3.4811181 11.4004542 10.4423415 10.4757715 9.5618678 0.4696400 0.9826100 0.4977000 2.7364000 0.0019418 0.5482400 -0.0146950 -0.0035196 -0.0052610 0.4669000 0.5075900 0.5088000 0.0058309 0.0056919 3.6569000 0.0027745 -0.0041546 -0.0061772 -0.5228700 0.0164250 -0.5088800 -0.5365200 2.3678000 3.6569000 -0.0284910 -0.5274700 -0.5274700 1.4808000 -0.0058140 -0.5173300 0.0068044 0.4977000 0.0019418 0.0019418 -0.0024938 -0.0024938 0.0066653 -0.0033243 -0.0022168 0.0000000 0.0203430 0.0132130 -0.0073339 -0.5196900 0.4975300 0.4975300 -0.5280900 -0.5280900 0.0056919 0.0056919 -0.5316500 -0.5313400 -0.0041546 -0.5541700 -0.0102320 -0.5228700 -0.5286900 -0.5286900 -0.5088800 0.0101460 -0.5365200 -0.0269880 -0.4997500 -0.0284910 -0.5274700 -0.5410800 0.0101460 -0.5418900 0.0033299 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 -0.509 0.503 0.000 -0.515 0.000 -0.500 -0.500 0.000 -0.499 0.000 0.492 0.000 1.481 0.000 0.000 0.000 0.000 0.476 0.476 0.000 0.000 0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.508 0.000 0.498 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 -0.509 0.503 0.000 -0.515 0.000 -0.500 -0.500 0.000 -0.499 0.000 0.492 0.000 1.481 0.000 0.000 0.000 0.000 0.476 0.476 0.000 0.000 0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.508 0.000 0.498 0.000 0.000 7.9695949 NA 5.3312251 9.3423705 12.1497255 6.1733593 11.2158300 9.0996219 8.4511505 0.2331518 10.4368467 11.6319806 4.6082297 1.0405418 3.1873877 7.7429676 3.9880848 9.4614103 11.5531472 11.2382910 9.3397558 4.8479017 7.1490723 10.0915625 7.0849423 4.0145517 2.6255043 NA 10.4949939 5.6510459 4.2331902 7.6678212 7.5528650 9.7963844 10.4993938 2.2331825 8.2430216 NA 7.2472136 12.0986362 9.0549667 8.4217817 -1.7666027 7.2830411 9.0841610 4.2104746 3.0911751 NA 3.8181552 5.9113345 0.5551290 9.8158053 -1.7666027 7.3980998 10.7808104 10.0231340 4.3206580 8.8153349 11.9258084 8.0112698 1.8181552 2.4031314 10.4876309 4.4426450 NA -0.7668482 1.5551290 15.100513 5.546076 8.971285 14.968048 9.622824 10.586064 13.369663 14.467281 8.805893 10.908268 12.919748 11.890400 10.651836 8.048576 2.933629 7.827517 12.749570 11.4412748 12.5773500 6.0276097 13.1331138 9.0389368 5.0145517 9.4408173 9.5934912 11.6161181 5.3100092 5.3206544 12.2585920 7.0112698 -1.7666027 10.5011499 3.5551167 9.2643840 10.7061375 10.1031721 10.2935511 7.8030488 8.7810515 12.6274546 4.0660806 11.7707510 9.5523004 10.0050949 9.9568538 12.0575550 10.0593441 10.8936345 11.1897505 9.8106216 NA 8.7246851 6.3503169 9.7385083 4.0145517 10.3328694 5.4426450 11.4356228 10.7142354 7.1097095 12.5673963 10.0900075 9.5890946 11.9779216 10.6335386 1.5551290 0.2331518 9.9700176 10.0481758 10.7025803 TCGA-AQ-A04J 45 0 NA 819 breast stage iia t2 n0 (i+) m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 3 4 NA NA NA 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.363527e-07 4.161568e-07 7.69230769230769 23.0769230769231 5.12820512820513 23.0769230769231 41.025641025641 10.08270472 9.80105791 11.58423618 9.77881850 8.63305625 9.37278694 9.57780985 11.04895850 11.03702366 13.10277784 11.22511294 11.15957356 1.51409700 11.78376144 2.66612030 9.70941902 7.83203047 10.22721533 10.05628736 7.86579079 NA 9.75570129 7.80362163 9.20450121 11.01152359 6.65252952 1.66612030 10.48946968 10.53339710 2.51412226 9.19359534 7.61798604 -0.65585325 6.33854386 10.11938899 10.38173717 9.41498199 10.23407446 9.76835654 11.02279036 5.42100444 8.62959231 15.41240171 8.47400116 8.70941920 11.11794765 10.85198487 5.12555192 0.66612030 9.29109655 12.25894909 -0.07081499 10.14225694 6.27492694 7.72356880 4.97354699 9.54508880 12.04083183 10.34911290 11.56502199 13.08744685 7.86382635 12.00808184 10.56226905 11.46717996 11.65522896 4.59211613 11.94363824 8.96715708 2.98804840 10.26417081 9.73543383 4.70525914 7.69291813 11.74666942 10.65423494 10.62293008 9.83904581 5.63881238 9.83554232 12.55120458 12.33118772 10.37140509 9.51786738 0.41352000 0.35322000 0.05742400 0.02123800 0.03781200 0.03360400 0.05044800 0.47570000 0.00463410 0.00463410 0.30751000 0.00005396 -0.40092000 1.45030000 0.03163200 0.03163200 0.40001000 -0.43275000 0.62741000 0.00199580 -0.01252200 -0.39837000 -0.39837000 0.45112000 0.00783250 0.00783250 0.00783250 -0.10770000 -0.38253000 0.00519000 -0.39782000 -0.40192000 -0.44594000 -0.08385800 -0.43492000 -0.43481000 0.05044800 0.47570000 -0.00631300 -0.25087000 -0.44163000 -0.05814000 0.39801000 -0.00451570 -0.00451570 -0.38141000 -0.66185000 -0.32769000 -0.19470000 -0.13918000 -0.40959000 -0.40959000 0.38277000 -0.43275000 -0.40325000 -0.80564000 -0.40296000 -0.41527000 -0.43492000 0.01075700 -0.39837000 -0.39837000 -0.49576000 -0.36913000 0.00783250 -0.10770000 0.01634000 0.03642500 0.03642500 -0.330 -0.330 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 -0.114 -0.114 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 -0.446 0.000 -0.435 -0.435 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.330 -0.330 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 -0.114 -0.114 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 -0.446 0.000 -0.435 -0.435 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.55972314 -1.65562597 7.32432998 10.26565935 12.23150606 5.81529619 10.76045999 10.12222634 8.16981680 3.62958976 12.26184203 10.92732709 4.20217477 -1.65562597 4.29838705 8.84801600 4.09907634 10.69540553 11.40099729 10.82951646 9.48310191 2.92914713 8.66949561 9.96669967 8.86382635 5.83604278 0.34414675 -1.65562597 11.79359685 5.71051167 7.48629766 8.89108466 9.77673207 9.49430560 11.08502504 5.28670376 8.88625474 5.95890066 8.79437038 12.87532798 7.75781800 9.22836080 -0.07081499 5.17708063 7.61331727 3.86774823 4.45271403 -0.65585325 7.57541142 2.73788141 6.67510739 10.94107879 1.80364036 9.62554082 10.73113045 9.56456852 6.97354699 10.76835654 12.60341859 9.51035335 5.78713466 4.51411595 10.72031566 3.83604530 9.98894778 2.43164970 4.77045379 11.138606 8.165964 8.476047 11.783761 11.349129 10.798747 7.865791 10.236354 9.455326 11.712969 13.724212 11.629159 9.291097 7.372096 2.151534 8.266031 10.621478 10.768881 11.385165 5.553643 14.085709 9.069548 8.609805 8.685153 6.753582 9.677681 8.663862 7.688486 11.225113 9.676227 4.898779 10.318963 7.347006 9.326200 13.155715 10.978548 9.799518 7.973547 8.882379 10.631037 8.305640 11.126122 9.414982 10.557902 9.774120 11.917246 10.044630 11.344014 10.527826 9.102414 -1.655626 9.681310 8.671743 12.258949 9.637662 10.142257 8.000615 10.325044 9.545089 8.081218 14.339737 9.624381 10.194768 12.730187 10.350867 8.814849 4.151542 10.536791 9.762570 9.099912 TCGA-AQ-A04L 48 0 NA 3957 breast stage iia t2 n0 (i-) mx female 2001 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 4 2 4 3 2 2 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.363527e-07 4.161568e-07 36.5853658536585 17.0731707317073 7.31707317073171 14.6341463414634 24.390243902439 9.9712911 8.7577840 11.3767900 7.8342631 8.8277139 9.3623629 10.7101568 11.0044781 11.7822067 13.9257940 10.7519159 10.5185286 2.9736664 12.9230318 4.0111378 10.2040024 5.9545569 8.6828405 17.0151806 13.0163332 NA 12.2373675 5.8342637 9.9601905 11.0070889 7.0203588 -0.2742152 10.7615684 9.9106137 0.3106891 8.7972008 7.6594287 NA 3.0476605 10.2019782 9.9683170 9.1707531 9.9012879 10.4493993 11.2441456 NA 10.8267291 14.8213826 7.3802307 9.4192254 10.7670553 10.6918832 2.7257412 1.8956516 8.3275091 10.7161969 0.7256975 10.5864374 5.3550938 5.2175913 5.4939227 9.5355065 11.7156650 8.9130905 11.4187896 12.7480194 7.6446019 10.7728623 9.6426106 11.2280729 11.2846373 4.1180523 12.8837168 12.4202050 -1.2743897 10.0716979 9.8045563 2.6335940 4.8342612 10.1619294 9.5578372 10.1897735 9.8407820 3.4806270 8.8511519 12.5603081 11.8448416 9.5290623 9.5727957 0.14348000 0.15876000 -0.38347000 0.44409000 2.78290000 -0.37302000 -0.82097000 0.11917000 0.03919500 0.85938000 1.07230000 0.35643000 3.65690000 0.40327000 1.40060000 1.15530000 0.01377200 -0.08837400 -0.34308000 0.06995600 0.22715000 -0.44027000 -0.44027000 0.00097064 -0.04265200 -0.41521000 -0.43322000 1.03310000 0.29024000 0.43024000 0.02505600 -0.36308000 -0.83519000 0.18192000 -0.31145000 -0.76698000 0.03199900 -0.75305000 -0.32862000 -0.38728000 -0.34779000 -1.26330000 -0.50170000 -0.45875000 0.77425000 0.26687000 0.00000000 -0.43018000 0.34275000 0.33674000 0.05551500 0.05551500 0.06995600 -0.24009000 -0.24009000 -0.76552000 -0.37932000 -0.37932000 0.22715000 -0.00609040 -0.44027000 -0.44027000 -0.35909000 -0.46515000 -0.82301000 -0.01725400 -0.36318000 0.31659000 0.31225000 1.069 1.069 0.403 0.403 0.000 0.000 -0.343 -0.343 0.227 0.000 0.000 -0.440 0.000 -0.359 -0.359 0.000 0.000 0.290 0.143 0.000 0.965 -0.363 0.317 0.000 0.000 -0.295 0.000 -0.767 -0.767 -0.373 -0.767 0.000 0.000 0.000 0.000 -0.404 0.859 -0.550 -0.550 0.000 0.000 1.069 1.069 0.403 0.403 0.000 0.000 -0.343 -0.343 0.227 0.000 0.000 -0.440 0.000 -0.359 -0.359 0.000 0.000 0.290 0.143 0.000 0.965 -0.363 0.317 0.000 0.000 -0.295 0.000 -0.767 -0.767 -0.373 -0.767 0.000 0.000 0.000 0.000 -0.404 0.859 -0.550 -0.550 0.000 0.000 8.4972279 NA 5.9155639 10.2619856 11.5684815 6.4674083 10.6553666 8.3340672 7.9733811 -1.2743897 12.1254168 11.5295305 6.2014712 -0.2742152 3.4806270 7.7397590 4.8550229 8.8906452 11.9604061 10.6239619 9.2374911 6.2648967 7.7864343 10.0942448 7.1810658 1.3106891 NA NA 11.3767900 1.3106891 5.7369647 9.3749945 9.5120080 10.2745602 10.1040332 2.8131963 6.9972009 3.1851688 6.3330695 13.7342107 8.3237907 7.9878330 -0.2742152 8.1790089 8.3928497 0.7256975 2.5330898 10.1692000 2.8956710 4.4267344 0.3106891 11.5377151 2.1851688 8.0876819 10.2230913 9.6438562 3.8131963 10.9012879 11.7264426 7.3550947 2.4261842 4.3107037 10.5095551 1.7257412 NA -1.2743897 2.3106891 13.172788 5.679933 11.396395 12.923032 10.169423 11.302459 13.016333 12.035641 9.660048 10.268287 12.426178 9.817835 8.327509 6.742547 NA 7.728553 11.756750 10.7982059 12.2641698 6.8498592 13.9560197 9.8277141 8.8729432 9.0408878 7.3550947 10.4679424 5.2803254 4.3981656 10.7519159 8.6667861 0.3106891 10.0926069 6.5837191 7.4921015 10.0672571 10.1856822 11.0286628 8.0226547 9.8401313 7.8342631 3.2492936 11.5774366 9.1707531 9.7087320 10.6367557 10.6121970 9.5883757 10.6258504 10.7411534 8.2195940 11.3890740 9.5373860 8.4791222 10.7161969 2.6326405 10.5864374 7.9473254 11.5489065 9.5355065 7.0655885 15.1211553 11.5665163 10.8649699 12.6289612 10.1499046 1.7257412 -1.2743897 10.4343912 9.2735968 9.6929647 TCGA-AQ-A0Y5 70 1 172 NA breast stage iiia t2 n2a mx female 2010 NA no infiltrating ductal carcinoma 5 white not hispanic or latino NA NA 4 2 NA NA 2 2 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.467973e-07 35.5555555555556 26.6666666666667 2.22222222222222 20 15.5555555555556 9.5726072 10.6711615 11.3962092 10.1032763 8.0543026 8.5421907 8.7704264 10.7275168 9.8706617 14.4099610 10.6238558 10.8836591 2.1982427 17.0281116 4.8376456 9.9140665 4.8376456 8.3131801 7.6826723 12.5145180 0.8197499 12.6970856 3.0827537 9.0139596 10.5132118 5.6167370 -0.5022599 8.8015774 12.5060502 4.2791592 8.8684840 8.1235053 -0.5022599 4.2526806 10.0571738 10.6513487 10.1216782 10.1626884 9.9556906 11.8901141 11.1095132 9.8679392 15.4637050 7.2452513 8.7193837 11.0376825 12.1727613 4.8376456 5.7362017 9.1032763 11.4558056 NA 11.6780167 6.7785674 6.7504618 5.4519924 10.8191611 11.5467944 9.7498708 11.7348573 12.7367239 8.0846367 11.0841674 10.1113099 10.8820409 10.7895430 5.4001109 11.9657843 11.9952743 0.4978423 10.5118172 8.9029382 3.0941347 5.0213598 10.0379248 10.3171775 9.5685885 9.9775770 4.8553469 7.6551436 13.2838110 11.7704265 9.6462734 8.9602991 0.28961000 0.32882000 0.01572700 0.02020300 -0.36578000 0.14593000 0.30649000 0.30649000 -0.38761000 -0.38761000 0.36674000 0.63481000 -0.04360200 -0.09366700 -0.01477800 -0.02862800 0.29915000 0.29915000 0.00875280 0.21883000 -0.00940460 -0.39386000 3.65690000 1.15210000 -0.37087000 -0.37572000 -0.32263000 3.65690000 -0.37290000 -0.37290000 -0.35145000 0.01572700 -0.36578000 -0.35099000 0.14593000 0.14786000 0.30649000 0.30649000 0.30649000 0.01950300 0.01321300 -0.37718000 -0.22502000 -0.22502000 -0.22502000 -0.39790000 -0.04360200 -0.10604000 -0.09393100 -0.01477800 -0.38673000 -0.00373950 0.29915000 0.29915000 0.29915000 0.00875280 -0.16447000 -0.16447000 3.54390000 -0.00055444 -0.39297000 -0.37459000 -0.38392000 -0.75935000 -0.75556000 -0.02616700 -0.18911000 0.22299000 0.22299000 0.000 0.000 0.000 0.000 0.299 0.299 0.000 -0.164 0.000 0.606 0.000 -0.371 -0.371 -0.769 -0.363 -0.323 -0.323 -0.018 0.355 0.000 0.000 -0.189 0.223 -0.337 -0.337 0.000 0.000 -0.366 -0.366 0.146 0.146 0.306 0.306 0.000 0.000 -0.377 -0.010 -0.372 -0.372 0.000 0.000 0.000 0.000 0.000 0.000 0.299 0.299 0.000 -0.164 0.000 0.606 0.000 -0.371 -0.371 -0.769 -0.363 -0.323 -0.323 -0.018 0.355 0.000 0.000 -0.189 0.223 -0.337 -0.337 0.000 0.000 -0.366 -0.366 0.146 0.146 0.306 0.306 0.000 0.000 -0.377 -0.010 -0.372 -0.372 0.000 0.000 8.3619828 1.0827707 5.2659807 10.0738086 11.2505955 5.0980068 11.2014840 9.4072998 7.1560082 NA 11.5503648 12.9523858 1.4977912 NA 3.4046852 8.1180165 5.3432870 10.1138860 11.5647268 10.6418176 9.5712689 5.8106796 7.6167378 9.7373952 5.3804386 7.4864811 4.7266133 -1.5022599 10.7415657 4.0827622 8.8152094 8.2905871 5.8901135 9.1341948 10.0095494 2.9572274 7.3681616 -0.5022599 7.7855094 12.7620194 7.7762461 7.4635808 -0.5022599 6.8986764 8.7314165 1.6677105 3.6270815 1.3051534 2.3051534 6.8161133 -1.5022599 11.1930250 2.4977912 8.7970049 10.4836387 10.3483743 4.6876206 9.2701112 12.1656844 8.4373759 1.6677105 4.0213554 10.4351705 3.7457214 -0.5022599 3.8553519 1.3051534 12.994287 5.553078 8.879340 17.028112 10.148848 11.410499 12.514518 10.763119 8.996646 11.189976 13.264015 9.137137 9.103276 8.274230 -1.502260 8.430011 12.906525 10.824507 12.604523 7.704811 14.040556 8.579946 4.924062 9.570599 7.647544 9.766748 5.127155 6.595829 10.623856 6.428534 -1.502260 10.737097 5.755184 6.357580 12.367583 10.044209 11.072627 8.218896 8.443241 10.535000 2.198243 11.589338 10.121678 9.856448 9.405438 11.625952 10.006582 10.196067 10.109283 9.334636 1.497791 8.647734 7.494581 11.455806 1.497791 11.678017 9.954151 9.763798 10.819161 6.398663 13.664509 9.987645 10.124418 12.993964 9.546965 NA 5.616737 10.109283 10.753416 9.066703 TCGA-AQ-A1H2 84 0 NA 475 breast stage iiia t2 n2a mx female 2010 NA yes infiltrating ductal carcinoma 13 white not hispanic or latino NA NA 1 1 2 2 1 1 5 6 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.733986e-07 26.0869565217391 13.0434782608696 4.34782608695652 17.3913043478261 39.1304347826087 9.5900207 9.9712032 10.6176965 8.9490382 9.1207521 8.6160831 9.8339881 9.1668201 10.0408883 12.8308121 11.6586871 10.4614127 2.7054914 13.2043472 1.0050406 8.4511076 5.6985463 8.0549071 8.8355736 13.6580713 3.9357992 14.7035324 8.5815426 10.6321020 11.2563928 7.8284253 -1.9948156 7.6289398 12.9774099 NA 7.5768108 6.0050586 -1.9948156 0.5900510 10.6243612 9.8865547 11.3906511 9.8363655 10.4956585 9.4096678 NA 10.9661462 13.9399009 6.3107545 10.0808716 11.9210310 10.9051704 3.7329746 -0.9948156 8.7847778 10.6407764 NA 11.2906050 4.3088414 5.1849666 5.0384801 9.7624483 11.6796920 10.5054023 10.1731036 12.7619794 9.0589842 9.7864180 9.5144375 11.5745579 10.3289575 4.6344132 11.9126062 9.5644353 -1.9948156 10.6878334 8.1382006 2.0050406 5.6489141 9.7119859 8.7872375 10.1655600 10.0771909 2.4644853 9.2071820 12.2347033 9.8132181 9.7414602 9.5928358 -4.1585e-04 0.0000e+00 -3.5721e-02 -3.8146e-02 5.4233e-02 5.9937e-02 -6.2286e-03 -8.7821e-01 -8.6617e-01 -8.6617e-01 8.5245e-01 9.4491e-03 9.4491e-03 8.0383e-01 6.9858e-01 1.8761e+00 -4.2415e-02 9.5883e-03 -8.6586e-01 1.3868e-03 -3.8986e-02 -6.2069e-02 -6.2069e-02 -6.2069e-02 -8.3997e-02 -8.3997e-02 -9.2345e-02 7.8003e-01 -9.2047e-01 -4.1585e-04 7.6392e-03 -3.5721e-02 3.2515e-02 2.4829e-02 5.9937e-02 5.9937e-02 -8.9626e-01 -8.3810e-01 6.9956e-02 7.4442e-01 -8.5114e-01 -8.6617e-01 -3.3802e-01 -1.2929e+00 -4.0130e-01 -4.0130e-01 9.4491e-03 9.4491e-03 -8.6696e-01 -1.3083e-01 -8.7829e-01 -8.7135e-01 9.5883e-03 9.5883e-03 9.5883e-03 -8.3978e-01 1.3868e-03 1.3868e-03 9.5501e-06 -8.6900e-01 -6.2069e-02 -6.2069e-02 -8.5094e-01 -8.3997e-02 -9.2345e-02 7.8003e-01 5.1359e-03 -7.4010e-02 -7.4010e-02 0.000 0.000 0.804 -0.806 0.000 0.000 -1.293 0.000 0.000 0.722 -0.147 0.000 0.000 -0.873 -0.873 0.000 0.000 0.000 0.000 0.780 0.780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.881 0.030 -0.030 0.836 -0.401 -0.401 -0.198 -0.198 0.000 0.000 0.804 -0.806 0.000 0.000 -1.293 0.000 0.000 0.722 -0.147 0.000 0.000 -0.873 -0.873 0.000 0.000 0.000 0.000 0.780 0.780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.881 0.030 -0.030 0.836 -0.401 -0.401 -0.198 -0.198 9.1837232 NA 7.8458363 10.5550835 11.3096948 7.6271837 11.1129292 7.2081612 9.1749833 NA 11.8538768 11.2972979 3.5596509 3.3626102 3.5900151 8.3724729 3.1749816 9.6867360 12.0542262 11.1463672 9.3609599 7.1774853 7.2927707 10.1126023 4.9937423 3.8124161 3.5286213 NA 10.1544879 5.6123879 5.6703928 8.5500226 7.4123260 10.5068457 9.9740850 3.4969097 7.8284253 2.7599441 7.3537864 12.5839027 9.8363655 6.2858294 -1.9948156 7.4685825 8.0467175 -1.9948156 1.9119600 NA 2.8630464 5.9026018 0.3269975 10.6889301 NA 4.5442195 9.5914290 10.1439700 6.5403342 11.0489400 14.1119892 7.9621603 1.8124161 2.1749816 13.9010122 0.5900510 1.1749816 3.3626102 1.4645114 14.1009633 3.7329746 8.5383880 13.2043472 9.5577273 10.9821593 13.6580713 11.5454286 11.2856957 10.6998514 13.0683691 7.6160834 8.7847778 8.1484415 0.3269975 7.8316068 10.7816969 10.5567666 11.6622651 8.2230161 13.8480199 8.7790216 3.5596509 9.0474018 7.3822687 9.4834033 6.1135817 2.6489256 11.6586871 4.3269831 1.8124161 10.8657573 3.8124161 6.1286625 7.8754232 10.3292389 10.8349792 9.7909194 8.0162857 10.8067666 2.4644853 12.4700832 11.3906511 10.6941827 10.2633299 11.5496606 8.5644353 9.4629521 9.9617974 7.8489790 0.3269975 8.1150978 5.2529870 10.6407764 1.3269975 11.2906050 5.6271107 10.2615618 9.7624483 7.1420499 14.0040894 10.1086739 9.7831354 12.7097185 9.4696040 NA -0.4100448 10.4043363 10.6284825 9.3554449 TCGA-AQ-A1H3 49 0 NA 989 breast stage iiic t2 n3a mx female 2010 NA yes infiltrating ductal carcinoma 14 white not hispanic or latino NA NA 5 5 4 3 4 4 4 3 4 3 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 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10.6277672 10.5172676 3.1199703 10.6505992 13.4272835 11.9505133 10.3797917 9.6981322 1.13230000 1.13230000 0.00847430 0.00847430 -0.00830050 -0.01064600 -0.00981850 -0.60584000 0.56872000 0.56872000 0.56774000 0.00055459 0.00055459 -0.00705760 -0.00705760 -0.00705760 -0.00567570 -0.00567570 -0.00636680 -0.00124730 0.00277450 0.39147000 0.39147000 0.39147000 0.00055459 0.00055459 -0.00223740 0.00110930 -0.00097017 -0.00097017 0.00000000 0.00847430 0.00458000 -0.00636680 -0.01064600 -0.01064600 -0.00981850 -0.60584000 -0.00387790 0.57592000 0.57077000 0.56872000 -0.00259050 -0.00259050 -0.00259050 0.01209700 0.00055459 0.00055459 -0.00705760 -0.00705760 -0.00705760 -0.00705760 -0.00567570 -0.00567570 -0.00567570 -0.00636680 -0.00124730 -0.00124730 0.00277450 -0.62218000 -0.47120000 0.39147000 0.00875280 -0.01023200 -0.00223740 0.00110930 0.00374650 0.01628600 0.01628600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.021 -0.613 -0.080 0.391 0.000 0.000 0.000 0.000 0.000 1.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.576 0.576 0.569 0.569 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.021 -0.613 -0.080 0.391 0.000 0.000 0.000 0.000 0.000 1.132 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.576 0.576 0.569 0.569 0.000 0.000 0.000 0.000 8.0786653 0.1658155 5.7951331 10.2358972 11.8011543 6.6547005 10.8877299 9.4897035 8.2881384 4.4325653 11.3701945 10.8710738 7.1936821 5.5233267 3.8662156 7.6893383 3.7203660 10.2782157 11.6022275 11.2852037 9.3231232 2.4137024 7.7222823 9.9958953 7.2479256 8.4442256 -0.8341845 NA 10.9181569 6.8452567 7.8096325 7.8452561 7.1430566 9.8296322 11.3338215 5.5666569 8.2479251 3.0726718 8.1978222 12.8088432 7.6293005 6.9038686 NA 2.4137024 8.6546206 5.3752306 4.1881477 -0.2493078 6.4137041 5.6782410 3.5233236 9.7869124 NA 9.1199726 10.2575421 9.7837028 5.6576286 9.1134132 12.5586973 8.7020234 2.5580962 3.9471331 12.7018413 1.3357119 NA 2.6893439 2.4137024 13.5959298 5.2101706 8.7497991 13.8862610 10.1871032 10.7551933 12.9358206 12.4235324 9.5100722 11.1517960 13.7007782 10.4944512 9.1257782 8.4430637 0.9731337 7.9223323 11.9113455 11.282283 11.583233 7.831112 14.255886 9.177702 6.838202 9.133002 9.599883 10.228625 6.604568 8.411329 10.600144 5.704936 4.750740 12.888424 8.877443 6.968518 12.612924 10.661381 10.795588 9.611826 7.679504 12.507990 6.558093 10.357933 10.784850 10.232874 9.937678 11.732068 10.166128 10.628534 11.025699 9.592041 2.558096 9.322744 7.855774 12.172891 6.816828 11.129937 8.417258 10.880756 10.764992 7.258586 13.773858 9.852714 10.340702 14.002049 10.339453 4.072663 2.929715 10.656878 10.732306 9.863613 TCGA-AQ-A54N 51 0 NA 78 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 black or african american hispanic or latino NA NA 2 4 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.733986e-06 3.467973e-07 13.1147540983607 14.7540983606557 21.3114754098361 29.5081967213115 21.3114754098361 8.8392035 7.8605768 10.6824073 5.4735532 8.2127371 8.5753074 9.0342688 9.8456487 11.7200205 11.9893750 10.6624661 9.6410107 1.0361165 11.5162656 1.0361165 10.8348904 7.5118823 10.6490171 10.5132322 5.3338280 NA 10.4412901 9.9218450 11.5419602 10.3759986 2.9106175 NA 8.1341809 10.5544739 -0.5487757 7.5010346 4.9430399 6.5172757 3.3580727 8.6557572 10.4313256 8.8774507 10.1782556 8.9550120 10.4162488 3.3580727 1.4511715 15.0813963 4.8161081 9.1977005 8.7062145 9.1585453 6.4846086 2.0361516 8.0361483 8.7179728 NA 12.8777129 1.0361165 4.7365886 5.4053832 7.9106175 11.9577416 10.5655792 10.3929673 12.1899117 9.1516257 10.8637560 10.1943375 9.5945693 10.0380259 2.4511979 11.4266759 9.9786631 5.2060727 10.6434789 8.9884046 3.8462526 -0.5487757 9.3745135 9.1671481 9.7073949 8.8795462 NA 6.3460030 12.2765424 11.4578628 10.5907375 10.7150421 3.3461000 2.2304000 -0.6044800 0.6166100 0.0325630 0.7222500 -0.6078600 -0.6101100 0.6616100 0.6390400 3.5485000 0.6640100 1.7974000 -0.5789100 -0.5772300 0.0607940 1.0887000 0.0481200 -0.6039000 -0.5977000 -0.5889200 -0.5570700 -0.5688300 -0.0316950 3.6569000 0.7064500 0.6764100 0.0959440 0.1084800 0.0454240 -0.1904900 -0.6044800 0.7560500 0.0442900 -0.6388700 -0.6357600 -0.6084400 -0.6101100 -0.6116200 -0.6137400 -0.0022168 0.0545180 0.6725200 0.6623500 -0.5929200 -0.5694200 1.1514000 0.6419400 -0.5845100 -0.5360200 -0.5702100 -0.5693200 1.0674000 0.0437230 0.0562330 -0.5920500 -0.6015800 -0.5825600 -0.5951700 -0.5728900 -0.5802400 -0.5688300 0.1219600 -0.5942900 0.6730700 -0.5700200 0.0751280 -0.5851000 -0.5762500 0.636 0.636 -0.560 -0.560 0.000 0.000 -0.596 -0.598 -0.578 -0.582 -0.582 -0.575 -0.575 0.105 0.105 -0.562 0.706 0.000 0.000 -1.293 -1.293 0.000 -0.572 0.000 -0.193 0.016 0.620 0.000 0.000 0.023 -0.619 -0.605 -0.605 -0.614 0.000 0.681 0.681 0.062 -0.581 -0.267 -0.475 0.636 0.636 -0.560 -0.560 0.000 0.000 -0.596 -0.598 -0.578 -0.582 -0.582 -0.575 -0.575 0.105 0.105 -0.562 0.706 0.000 0.000 -1.293 -1.293 0.000 -0.572 0.000 -0.193 0.016 0.620 0.000 0.000 0.023 -0.619 -0.605 -0.605 -0.614 0.000 0.681 0.681 0.062 -0.581 -0.267 -0.475 8.6085332 NA 7.8732509 12.8468541 11.4042912 8.0268764 10.5888177 4.9152006 10.0879286 NA 11.7059195 11.4039274 2.9106175 NA 3.5386499 9.2077423 2.9106175 11.3029351 10.8600465 10.3399294 10.3361198 NA 9.6883961 11.5852915 3.3580727 5.4511847 NA NA 9.1722852 NA 7.6459430 7.0134288 11.0115189 11.6462076 10.1385618 NA 10.2617577 4.9430399 5.8262256 13.0680795 9.6715644 8.5037542 NA 2.0361516 8.4313258 4.2585415 8.0548127 NA 3.1516316 0.4512243 1.4511715 11.7097521 7.7910359 7.4053823 10.0105632 9.7109294 7.3277026 10.6211111 11.5243235 6.4053832 3.0361516 2.6211024 10.3804445 NA 7.0134288 NA 4.0361516 12.309336 9.318465 8.663075 11.516266 10.095944 11.761799 5.333828 7.021042 9.777616 10.077808 14.828736 11.782943 8.036148 8.593293 3.843502 7.626112 8.503754 10.294322 12.069572 6.407011 13.665350 8.161992 2.258549 10.626736 7.232546 8.692430 5.284077 6.680005 10.662466 11.768881 5.179105 9.316919 9.321551 7.980812 12.031680 10.060365 9.656979 7.302935 9.175700 NA 2.036152 13.267584 8.877451 9.885814 10.196860 11.497287 10.719143 10.178256 10.289602 5.151627 NA 9.113730 1.773110 8.717973 4.660638 12.877713 NA 10.559711 7.910618 7.528002 15.464334 10.505790 9.720313 11.412998 11.863756 NA NA 10.111182 7.570127 9.051099 TCGA-AQ-A54O 51 0 NA 1001 breast stage iia t2 n0 m0 male 2011 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 5 2 2 1 1 3 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 2.427581e-07 25 16.6666666666667 8.33333333333333 33.3333333333333 16.6666666666667 9.0965070 8.1580295 10.0168793 3.3195312 9.0654800 8.5632287 9.3614890 10.3263971 9.7251399 13.8072540 10.6479512 10.5071526 1.7345687 12.3802215 NA 10.2639937 7.1211439 8.5758652 10.0542353 12.2043745 NA 14.4696255 2.7345687 10.6241684 10.7199307 7.1153850 1.1495846 8.3443576 10.0617415 2.4715257 6.7789576 6.5419175 NA NA 7.8707001 9.6682537 10.0781190 9.9585647 8.7970590 10.1781974 0.7345687 10.4004912 13.4334848 5.8494864 9.1566279 9.1037969 9.5547421 5.3784180 6.5246404 7.3927742 10.0130126 NA 9.9334174 2.6090221 5.4163871 1.9569488 9.5246400 11.4519539 9.9044882 11.2337446 11.5579303 9.5536777 10.0906482 9.4152157 10.0935805 9.3044186 2.0449186 10.9521169 9.8664201 NA 10.5992652 8.4602134 2.6090221 1.4715517 10.9681828 9.2502629 10.5268111 10.0044689 1.9569488 8.1802677 12.5948742 9.8681334 10.0466897 9.6293808 1.008200 1.012000 0.523800 0.575230 0.282120 0.358560 -0.809720 -0.856070 1.140500 1.140500 1.163300 0.250270 -0.393860 -0.017391 0.827840 0.355940 -0.250920 0.273630 -0.137810 -0.165230 -0.157200 -0.184330 -0.184330 0.740240 0.178810 0.396800 0.447820 1.891200 -0.189950 -0.097759 -0.180850 0.523800 0.270320 0.284380 0.151730 0.000000 -0.809720 -0.809720 -0.856070 0.528360 0.531340 -0.155280 -0.813840 -0.176130 -0.176130 -0.176130 -0.393860 -0.393860 -0.017391 0.291040 -0.692150 -0.700640 -0.250920 0.271590 0.271590 -0.137810 -0.165230 -0.165230 -0.157710 0.506370 -0.184330 -0.184330 -0.149260 0.156470 0.447820 0.515420 -0.316220 -0.893430 -0.185460 0.250 -0.144 -0.692 -0.692 0.023 0.274 -0.138 -0.165 -0.158 0.486 0.486 -0.184 0.556 -0.149 -0.149 0.397 0.397 1.008 1.008 0.727 0.000 0.165 -0.198 -0.181 -0.181 0.524 0.524 0.282 0.282 0.152 0.000 -0.856 -0.856 0.528 0.528 0.524 1.141 -0.176 -0.176 0.000 0.000 0.250 -0.144 -0.692 -0.692 0.023 0.274 -0.138 -0.165 -0.158 0.486 0.486 -0.184 0.556 -0.149 -0.149 0.397 0.397 1.008 1.008 0.727 0.000 0.165 -0.198 -0.181 -0.181 0.524 0.524 0.282 0.282 0.152 0.000 -0.856 -0.856 0.528 0.528 0.524 1.141 -0.176 -0.176 0.000 0.000 9.429211 NA 5.339426 11.244668 11.399899 9.968335 10.292984 NA 10.742431 NA 12.380972 12.872088 5.688759 5.734563 NA 7.278883 3.319531 10.276305 11.357530 10.380822 9.563229 3.904484 8.502747 10.315136 5.657394 5.007581 2.149585 NA 9.195360 1.734569 5.917785 7.829081 8.106703 11.786868 9.453381 1.734569 9.162225 NA 6.171969 11.474906 11.004469 7.825557 NA 4.149601 8.633416 2.471526 3.397529 NA 5.056492 5.319524 1.149585 10.297441 2.734569 5.397529 9.404629 9.365134 4.982492 10.300617 10.856528 6.734563 2.956949 4.319524 11.325774 NA NA 3.734558 2.609022 12.4781690 6.7862252 9.7679861 12.3802215 10.2177071 11.2788836 12.2043745 11.1957014 8.9044880 9.1733548 12.2581251 8.7420578 7.3927742 8.7364405 0.1496496 7.0744134 11.3838193 10.200809 11.884733 6.319526 12.775880 8.399899 4.793459 8.416387 7.289152 8.817776 6.850041 9.153821 10.647951 8.339425 4.764309 8.974559 6.541917 7.514873 8.346817 10.344357 10.088445 8.721353 10.735502 6.911152 4.237067 12.804364 10.078119 10.562170 10.670710 9.909489 7.877521 9.886003 10.138995 4.193992 NA 9.017914 5.891067 10.013013 4.673161 9.933417 7.278883 10.949287 9.524640 6.625333 13.419166 10.193995 9.152416 11.575865 10.574292 3.319531 NA 9.991165 7.617206 9.121144 TCGA-AQ-A7U7 55 1 584 NA breast stage iiia t2 n2a m0 female 2013 NA yes infiltrating lobular carcinoma 4 white not hispanic or latino NA NA 2 3 5 3 7 4 4 3 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.6542806 9.6867642 11.3849416 9.4893272 8.4664207 10.0310706 9.8549416 10.2355104 10.1152364 9.1567809 11.1088748 10.4763387 0.2279875 11.9174315 2.8909719 9.6812866 6.4948028 9.1802717 8.7023978 11.8291676 1.9649900 12.9417603 7.0310709 9.9046194 9.5566907 9.2373780 NA 13.3183268 9.9022081 2.2280183 9.1288826 7.6430531 -1.3569750 6.1428994 10.0278370 9.8814581 9.8500677 10.9313427 9.4861892 11.2012348 2.2280183 9.5745296 15.0313566 8.3415148 10.2669348 11.2651051 10.8604053 5.8814591 4.5737926 8.7877116 11.6244422 -1.3569750 10.6303174 6.3012657 8.3760685 5.2577650 10.2563824 11.7018907 10.4536250 12.4387887 13.0421977 8.5559427 10.8718721 10.7717373 11.2662490 11.4747564 5.3434931 11.1291342 11.0148300 -0.3569750 10.4865818 9.0682693 5.6688566 7.1587531 10.5298931 9.8537247 10.4723797 9.7966054 3.8525083 9.2392431 13.2554035 13.1082371 10.0017046 10.0299936 0.53571000 0.56005000 0.01101500 0.01219800 -0.01178700 0.01024700 0.55686000 -0.28326000 0.00774010 0.00774010 0.00774010 0.28592000 -0.28616000 -0.00100820 -0.00100820 -0.00100820 0.00120990 0.00801840 -0.28556000 0.02563300 -0.00792420 -0.01825300 -0.01825300 -0.01825300 -0.03003200 -0.03003200 -0.03003200 0.28782000 -0.01797900 -0.28730000 0.00718350 0.01101500 -0.01178700 -0.01178700 0.01024700 0.09285500 0.56005000 -0.28326000 -0.29064000 0.00481970 0.00481970 0.00143310 -0.00183940 -0.00183940 -0.00183940 -0.00183940 -0.28159000 -0.29441000 -0.01390000 -0.00100820 -0.00100820 -0.00100820 0.00120990 0.00093253 0.00093253 -0.28338000 -0.26556000 0.05205900 -0.00792420 -0.30501000 -0.01825300 -0.01825300 0.00565370 -0.03003200 -0.03003200 0.28782000 -0.27658000 -0.30490000 -0.31100000 0.300 -0.294 0.000 0.000 0.000 0.000 -0.283 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.536 0.288 0.288 0.000 -0.311 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.539 0.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.300 -0.294 0.000 0.000 0.000 0.000 -0.283 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.536 0.288 0.288 0.000 -0.311 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.539 0.256 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.2596020 0.2279875 5.6764762 10.5371132 10.7325038 7.9450294 10.9373869 9.9878653 9.3223135 4.5972511 11.7306819 11.6302730 4.6430538 -0.3569750 5.2280144 8.2336403 4.4759409 11.8170427 11.2284854 11.1354073 8.8597991 7.0776820 7.9559364 10.0449995 9.4600371 4.9829023 1.8129910 NA 11.1525810 6.7826051 7.5226365 8.4854039 8.7344888 11.4505452 10.5087866 6.0439328 9.1055555 -1.3569750 8.5767440 11.7671747 10.4624342 8.6874474 NA 3.3434931 8.5899597 NA 5.5256962 NA 8.4901108 3.9295638 5.6430538 10.1409052 -0.3569750 8.6059495 11.0428653 9.7430586 7.3190100 11.2671634 14.2206002 9.9895671 5.2724114 5.5256962 11.0577386 0.6430250 -1.3569750 -1.3569750 0.6430250 12.149574 5.370973 8.252232 11.917431 10.264189 10.357299 11.829168 11.815481 9.063972 10.957920 13.556551 10.968640 8.787712 8.439093 1.227987 7.350412 11.269219 11.3341425 11.9713075 6.2280163 12.6817941 8.3811458 9.2157536 8.7010451 7.9168492 10.4737706 9.9474046 8.4979217 11.1088748 8.0202638 1.2279875 10.9139327 5.1349068 8.2318053 11.0651181 11.4574355 10.5249321 7.2869098 9.3278019 11.5831834 10.4350301 12.8441335 9.8500677 10.4873669 9.7619944 10.5195703 11.2923096 9.7077962 10.6335119 8.9168489 0.9649531 10.1894945 7.9155896 11.6244422 10.1443930 10.6303174 7.4079246 11.2362950 10.2563824 7.4916760 13.1215702 9.4608365 10.2429661 12.9318473 11.2207182 6.3434931 3.6430481 9.8886061 9.9739702 9.9962002 TCGA-AR-A0TP 43 0 NA 4275 breast stage iia t2 n0 m0 female 2003 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 4 1 1 5 5 2 7 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.2673020 9.3632164 11.6838750 9.6763937 8.4486718 8.4531500 9.1220641 10.7290436 12.0700481 13.4051330 10.5963328 10.7247287 0.5342609 11.5002513 3.9937196 9.3156464 6.4108041 8.4590992 11.0248869 6.8196886 1.1192234 3.3416442 9.8668828 9.3284914 10.7600966 5.1041437 1.1192234 7.8539589 10.7622034 1.8562288 7.9605517 7.9563512 NA 3.4411780 9.3703369 9.6480289 8.4884829 10.2958379 9.6616361 12.2968764 -1.4655399 8.0850337 16.3478675 7.7411548 9.7110832 10.4203643 9.6070893 2.7822198 1.8562288 9.4701883 10.8522645 0.5342609 10.8374967 3.4884893 4.3156459 4.9937196 8.1471551 11.8647835 8.9114972 12.0501097 12.7927791 9.3400306 11.3973114 11.5460538 11.8925258 12.1267437 4.9436776 12.2919892 11.6085954 0.8562288 10.0430719 10.1794948 3.8583789 3.3416442 10.7576851 10.3303262 10.5997028 10.2732234 7.5759461 9.1499163 12.9013601 11.9924369 9.9793016 10.2528195 1.3919000 1.5176000 -0.9055500 0.7394800 -0.8958800 0.8705000 0.9081500 -0.9424000 -0.9645200 -0.9645200 1.8592000 0.0084743 0.0084743 -0.9351900 0.0127950 0.0127950 -0.0018014 0.8390300 0.8972800 -0.8949400 1.6268000 -0.9069200 -0.9166500 -0.2822700 0.7400500 0.0386300 -0.0522610 -0.0150540 -0.0231550 -0.1321200 -1.0537000 -0.9055500 -0.9873800 -0.1297000 -0.9186000 -0.9149200 0.9081500 0.0126550 -0.9820400 -0.0109220 1.5468000 -0.9645200 0.1345000 0.1300700 -0.8888100 -1.0008000 0.0084743 0.0084743 -0.9841400 0.0127950 0.0352420 0.0352420 -0.0018014 -0.0070576 -0.0183530 -0.9076800 -0.8747100 0.0358060 -0.0951200 0.0237060 -0.9069200 -0.9015300 -0.9206200 -0.9429800 -0.0522610 0.7543300 0.0800240 0.0536280 -0.1563100 0.000 0.000 0.000 0.000 0.000 0.000 -0.858 0.000 0.884 0.000 0.000 -0.861 -0.861 0.000 0.000 0.000 0.000 0.000 0.579 0.000 0.000 -0.310 0.868 0.000 0.000 -0.894 0.000 -0.863 0.000 0.000 -0.915 0.000 0.000 0.000 0.000 -0.965 1.195 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.858 0.000 0.884 0.000 0.000 -0.861 -0.861 0.000 0.000 0.000 0.000 0.000 0.579 0.000 0.000 -0.310 0.868 0.000 0.000 -0.894 0.000 -0.863 0.000 0.000 -0.915 0.000 0.000 0.000 0.000 -0.965 1.195 0.000 0.000 0.000 0.000 9.3930448 NA 6.1636436 11.4302406 11.5335821 5.2593478 10.6385578 9.4185106 7.9106727 NA 10.8357829 10.8255351 3.3416442 NA 4.6217471 8.9027932 1.8562288 6.8696765 11.6424844 11.2459537 8.8984212 0.5342609 8.2908432 10.7443492 4.7822146 12.6798209 3.4411780 1.5343107 11.3488692 NA 4.5786791 8.8808003 4.3671753 10.1474130 11.7756741 -0.4657391 9.5108508 2.1192566 8.5690855 13.2552256 8.3156464 8.6415038 0.5342609 8.1599954 7.5115669 NA 5.5566532 6.9266044 1.5343107 3.8946529 1.5343107 11.6755956 1.3416442 10.3540666 11.5837949 10.1041423 4.3416442 7.0018923 10.6548486 7.6349490 5.8830147 2.3416442 10.2338592 3.5342858 7.9394282 0.5342609 10.3984729 9.412384 7.619095 7.441177 11.500251 10.008500 11.529701 6.819689 13.354865 9.293343 11.081422 12.731964 10.791085 9.470188 8.416930 4.441178 7.716681 10.880246 10.239919 12.551704 6.567710 15.851070 8.470925 5.163644 8.989614 4.315646 9.774374 3.341644 4.148999 10.596333 10.456871 2.993711 10.659700 9.211125 9.396645 13.907764 9.743740 10.791380 7.828908 8.305776 9.443430 1.704208 11.039317 8.488483 9.467240 9.893487 11.568914 10.139303 11.536750 10.247673 9.615770 NA 9.248833 8.613918 10.852265 2.704208 10.837497 8.192498 9.243629 8.147155 8.024135 14.237217 10.219473 10.921227 11.427209 10.050972 -1.465540 -1.465540 11.408500 10.176338 8.423030 TCGA-AR-A0TQ 27 0 NA 2991 breast stage iiia t3 n1 m0 female 2006 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 3 2 1 2 4 1 1 4 1 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.2239409 9.8575929 12.0802589 9.6879871 9.2429628 8.3240486 10.6090402 10.2960585 9.7566887 14.5881447 11.4682846 11.0684489 3.0847276 16.6665201 2.7743759 9.0101065 5.7378544 8.4603195 9.0001172 12.6730716 0.9378717 14.6793302 2.7154761 10.1176701 11.0721212 8.6393085 3.4159209 10.1359584 10.5716520 2.3784561 6.8787168 6.7994086 0.4524900 4.8719915 9.9131122 10.3914430 9.8745162 10.1045794 9.6248790 11.3525635 2.3784561 10.8439099 15.3793497 8.6364539 9.9069399 11.8999480 11.4372971 3.6851104 3.4524505 8.9507023 10.5614986 NA 10.7896273 6.1020660 6.5567881 5.3973101 10.6879871 11.7451182 9.3472692 11.3298890 12.8669253 7.4251437 10.7084242 10.6162822 11.0925156 11.1560090 4.8854133 11.3306557 9.5567881 0.1305356 9.4990299 9.1563552 3.3496908 6.4748189 11.3997962 10.2594844 10.9995388 10.3411947 1.5899552 5.2285571 12.0107765 11.7357714 10.1448926 9.1417506 0.18980000 -0.25576000 0.00444680 0.01600600 0.01712400 -0.00097017 -0.15464000 -0.15464000 -0.04563500 -0.04563500 0.45564000 -0.00747200 -0.00747200 -0.01587900 -0.05072500 -0.01188700 0.22283000 0.22283000 -0.00448740 1.23010000 -0.01821600 0.17724000 3.65690000 3.65690000 -0.29154000 0.17211000 0.14477000 3.65690000 -0.26979000 -0.23202000 0.00861350 0.00444680 0.01712400 -0.00487870 -0.00097017 -0.00097017 -0.15464000 -0.15464000 -0.15464000 0.00000000 0.00000000 -0.04563500 -0.50826000 -0.46600000 0.01810300 0.01810300 -0.00747200 -0.00747200 -0.01587900 -0.01587900 -0.01188700 -0.01188700 0.22283000 0.22283000 0.22283000 0.00138680 -0.02110400 -0.02110400 -0.01821600 -0.02996900 0.17724000 -0.29733000 -0.00940460 -0.29154000 0.17211000 0.20274000 -0.01958900 -0.04955900 -0.04955900 0.000 0.000 0.000 0.000 0.223 0.223 0.000 0.000 0.000 0.000 0.000 0.177 0.177 0.000 0.000 -0.119 0.172 -0.234 -0.234 0.845 0.845 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.000 0.000 0.000 0.456 -0.472 -0.472 0.000 0.000 0.000 0.000 0.000 0.000 0.223 0.223 0.000 0.000 0.000 0.000 0.000 0.177 0.177 0.000 0.000 -0.119 0.172 -0.234 -0.234 0.845 0.845 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.000 0.000 0.000 0.456 -0.472 -0.472 0.000 0.000 8.6402984 NA 5.3104310 10.6278763 14.1190749 6.6703801 10.0763330 9.0220792 8.6808275 3.8309651 11.0454690 11.3490609 3.8584486 NA 1.4524373 8.2285556 3.3399782 11.2610940 11.7320620 10.6452374 9.4941105 4.8719915 7.4946580 9.1220452 7.9570719 4.3399782 3.4524505 NA 10.2009797 4.4703742 8.4968454 8.4670300 7.4136119 10.4718532 10.1528912 2.7154761 9.4563910 -0.2845459 6.8240104 11.9638088 7.9885046 7.2153321 NA 8.3808216 7.1220452 -0.8695962 4.1966149 -1.8693327 6.8753574 3.6659498 3.9885029 11.4817387 2.4524637 7.6540853 10.5837940 9.8732538 5.7743786 9.5573122 14.0431321 8.8456274 5.1305232 4.5399156 12.8481998 1.4524373 NA -1.8693327 0.7154541 13.505152 6.320347 8.037414 16.666520 10.296373 9.753948 12.673072 12.849805 8.907581 11.035534 12.701624 11.516521 8.950702 7.626379 3.130519 9.665313 12.553245 11.0710205 12.6281258 6.9216862 12.8242815 8.4580760 7.4228452 9.0590418 9.4199659 10.5065212 7.5837943 9.6817509 11.4682846 4.8447673 -1.8693327 10.8040533 4.9378764 9.1925088 11.8798691 10.4891746 10.6328579 9.0818080 9.4620002 9.8563156 7.2285551 11.7092463 9.8745162 9.7730264 10.0876254 11.2031584 9.6278762 10.3739949 10.6417818 9.4957521 -0.2845459 9.9261815 7.6096567 10.5614986 7.7851595 10.7896273 5.5899552 10.5025722 10.6879871 7.6104454 12.8273822 10.2126724 10.2862903 11.5986383 10.3653408 6.0905253 2.0374174 10.1131605 10.1539312 9.5729486 TCGA-AR-A0TR 68 1 160 NA breast stage iib t2 n1 m0 female 2006 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 1 2 1 2 2 4 1 5 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.1220664 10.2320767 12.4610667 10.5188552 8.4553630 9.4893892 11.6006196 10.1385060 7.5172340 14.7587723 10.8016931 11.4460198 1.1356662 13.1649351 3.3451409 7.5889619 6.5869028 8.1172582 9.5139859 13.9275915 2.3836075 14.9137040 5.4932438 8.8353241 11.1504089 7.8955789 0.1356662 7.9005293 10.3551621 NA 7.9526749 5.3645094 NA 3.0425743 10.2889264 9.4089037 10.4254217 12.0152743 10.1549343 12.2307583 0.1356662 12.5897332 13.2844456 10.3201604 10.2707557 11.2195027 11.5637894 3.9685792 6.0485806 9.1635971 13.4339684 NA 10.5052884 3.3056204 4.7055467 3.0425743 9.9256322 12.1735811 10.8859793 10.3509206 13.1454759 6.8567903 10.7376939 11.2994869 12.0341034 11.8921431 5.7867427 11.9540735 11.2954047 NA 9.6250372 9.4153015 4.4639167 4.1129670 9.6845130 9.8473579 10.9827484 10.0263353 1.4575943 10.2383229 11.7034095 10.3112406 11.1217108 9.4018920 0.87921000 0.90561000 0.00518990 0.00213450 -0.43481000 0.51479000 0.44585000 -0.44280000 0.00043013 0.00043013 0.00043013 -0.44735000 -0.44670000 -0.00603670 -0.00603670 -0.00603670 -0.90256000 0.43452000 -0.43600000 0.45061000 -0.44853000 -0.92284000 -0.00410080 -0.00410080 -0.01266000 -0.01266000 -0.01266000 -0.01548600 0.00000000 0.00000000 -0.07035000 0.00213450 -0.95534000 -0.43481000 0.44331000 0.44331000 0.44585000 -0.44280000 -0.45544000 0.45316000 0.44281000 0.03092800 -0.90363000 -0.43383000 0.42576000 0.42500000 -0.44670000 -0.44422000 -0.00603670 -0.00603670 -0.00603670 -0.00603670 -0.90256000 0.43452000 0.43452000 -0.43600000 -0.46116000 -0.46116000 -0.44530000 0.45503000 -0.92284000 -0.00410080 0.02277900 -0.01266000 -0.01266000 0.00811740 0.02263900 -0.93464000 -1.02230000 -0.447 -0.447 0.000 0.000 -0.475 0.428 -0.436 -0.461 -0.445 0.455 0.455 -0.919 0.000 0.000 0.000 0.000 0.000 0.000 0.871 0.000 0.000 0.000 -0.935 0.000 0.000 0.000 0.000 -0.435 -0.435 0.443 0.443 0.023 -0.423 0.443 0.443 0.000 0.000 -0.008 0.426 0.338 -0.008 -0.447 -0.447 0.000 0.000 -0.475 0.428 -0.436 -0.461 -0.445 0.455 0.455 -0.919 0.000 0.000 0.000 0.000 0.000 0.000 0.871 0.000 0.000 0.000 -0.935 0.000 0.000 0.000 0.000 -0.435 -0.435 0.443 0.443 0.023 -0.423 0.443 0.443 0.000 0.000 -0.008 0.426 0.338 -0.008 8.1814505 NA 1.8361261 10.0316450 11.2494332 7.1588359 11.9837271 7.1241772 8.0927931 2.3056204 10.0244342 9.7914096 2.5951217 3.9936744 0.7206287 7.6415027 2.3056204 8.1566712 11.8574311 11.5430916 8.9276678 2.9936744 8.2701173 9.3224244 6.5237078 2.7206506 NA NA 10.3475793 9.2111702 4.5450849 8.6434857 2.8361261 10.1805120 11.1428935 4.8499342 8.2943009 -1.8640712 8.0738004 12.7768396 9.5210142 4.3056131 -1.8640712 0.7206287 7.8464977 3.9430493 1.1356662 -1.8640712 4.8221897 5.3660494 3.4210886 10.4463038 -0.2792838 5.6195069 11.0510102 10.1698021 4.0183315 10.2004337 11.4733129 7.0782053 3.7504028 2.3056204 12.5026279 -1.8640712 NA 2.3836075 -0.8643338 12.7552467 3.7795434 8.3705083 13.1649351 10.2264651 11.1074142 13.9275915 12.8512241 9.2585189 10.2248104 12.3991069 6.6395173 9.1635971 8.8567903 -0.2792838 7.3031095 12.1310165 11.1337525 11.4470136 7.9235937 13.7596842 8.9819648 5.5535448 9.2422540 7.7813492 11.5767275 6.5280086 8.9071806 10.8016931 5.6670718 -0.2792838 10.8563628 4.3451409 7.4097193 6.4976347 10.8561490 11.1990861 8.9307403 8.5215533 13.3162607 6.5619554 10.8925288 10.4254217 10.5835491 10.1946974 6.0485806 9.3156002 10.3734985 11.3188611 10.1154734 -1.8640712 9.9453184 4.6902774 13.4339684 6.7281477 10.5052884 1.3056204 10.8936123 9.9256322 8.2071535 14.3475603 10.5501120 10.3924894 12.3048331 10.1314582 6.0605036 -0.5953148 11.2000970 10.7985819 10.8464975 TCGA-AR-A0TS 46 0 NA 2558 breast stage iib t2 n1 m0 female 2006 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 3 3 4 NA 6 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 9.710324e-07 3.121176e-07 16.2162162162162 29.7297297297297 8.10810810810811 18.9189189189189 27.027027027027 10.8249702 10.0792980 11.9178762 10.2550332 8.5095379 9.1599639 9.0122670 10.4268469 11.4377868 14.5592054 10.6922244 10.9032742 2.5592226 13.0890350 3.4336939 9.4574063 4.8970952 9.3369370 11.9929263 4.0331587 NA 7.7157294 7.3021893 9.4824930 11.1849338 8.0722945 3.8487281 9.3977285 12.0779874 4.4553864 9.4289045 7.7665104 0.3893465 5.1307662 9.5333208 10.2433891 9.3288791 10.7949733 10.0254714 11.6364857 1.1966700 7.5987530 15.7543835 9.0716627 9.9901421 11.7479511 11.3747861 4.3892983 2.4767705 10.3387619 10.7864398 -1.6108738 10.7291500 6.1837168 8.0966593 6.1307662 9.4377868 11.8951115 10.4319853 11.0256980 12.7353288 8.5803592 11.0504099 10.6895123 11.2673509 11.7928446 5.3081643 12.9984209 8.4061080 2.4767705 10.1541715 9.6294951 3.9775639 6.4767624 9.5642255 10.2213987 10.5043436 10.3185584 6.7157300 7.2565786 12.7405153 11.6976390 10.1374928 10.0749248 0.317710 0.321250 -0.178660 0.334480 0.189800 -0.066654 0.121380 0.107890 0.151420 0.151420 0.745940 0.345670 -0.143740 0.059223 -0.114610 -0.060162 0.216220 -0.117170 -0.087579 -0.041431 0.384520 0.026514 0.026514 0.026514 -0.102010 0.044007 0.044007 0.057617 -0.084395 0.310330 -0.120300 -0.178660 -0.126680 0.179810 -0.066654 -0.066654 0.121380 0.107890 -0.073251 0.058367 -0.026681 -0.303450 -0.122650 -0.122650 -0.122650 -0.122650 -0.143740 -0.143740 0.059223 0.059223 0.292620 -0.058731 0.070492 -0.284300 0.039761 -0.087579 -0.070001 -0.070001 -0.153880 0.276470 0.026514 0.026514 0.011818 -0.102010 0.044007 -0.142110 -0.348590 -0.099999 -0.131220 0.346 0.202 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.259 0.137 0.000 0.000 0.104 -0.114 -0.102 0.000 0.310 0.310 0.000 0.000 0.000 0.000 0.064 -0.119 0.200 0.200 0.063 0.190 0.000 0.000 0.108 0.108 0.000 0.000 -0.152 0.399 -0.123 -0.123 0.000 0.000 0.346 0.202 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.259 0.137 0.000 0.000 0.104 -0.114 -0.102 0.000 0.310 0.310 0.000 0.000 0.000 0.000 0.064 -0.119 0.200 0.200 0.063 0.190 0.000 0.000 0.108 0.108 0.000 0.000 -0.152 0.399 -0.123 -0.123 0.000 0.000 8.4727794 6.1374933 7.1574844 10.2860107 11.3790492 6.3463435 10.7613488 10.6127134 8.2859048 2.4767705 11.2604351 11.3681998 4.1706622 -0.6106535 4.9438885 9.5121279 4.5390471 9.7396866 11.5277318 10.7174138 8.5491713 1.3892915 8.4886476 10.2449471 9.5049939 7.6084685 1.1966700 -1.6108738 11.8287413 5.9284580 7.0722945 7.8970946 9.5567181 10.9425572 11.2835493 5.4445809 8.6607629 -0.0257644 8.1257017 12.4493203 9.4033203 6.5741757 -0.0257644 4.6181212 7.8731155 2.7816115 2.9742540 -0.6106535 7.7965679 2.9128606 6.5889724 11.0007859 6.7773171 11.5288513 11.7476764 9.9352297 7.2780433 10.9982478 12.3968529 9.7567148 6.9929259 5.2719448 10.9284587 -1.6108738 11.1690193 NA 7.0966593 9.8579392 7.8322432 8.4925879 13.0890350 10.1576539 10.9697941 4.0331587 12.0122669 9.1558289 11.7346844 13.4026226 10.0340575 10.3387619 7.5815930 -0.6106535 7.7269218 11.2696488 10.792845 12.187367 4.865033 13.840285 9.325938 9.426847 9.556091 7.183716 10.159580 9.299193 8.190200 10.692224 7.674702 2.296193 10.934988 6.936194 9.907938 13.869333 11.213463 10.203482 7.428219 8.315596 10.489962 9.542219 11.436139 9.328879 10.008144 9.987352 12.281843 12.213762 11.220607 10.851291 10.180463 6.492587 10.415713 7.807005 10.786440 10.024565 10.729150 5.943889 10.270812 9.437787 7.940047 13.951125 9.665424 10.546647 12.744582 11.386656 9.098384 4.943889 10.540316 10.153342 9.809787 TCGA-AR-A0TT 53 0 NA 3316 breast stage iiia t2 n2 m0 female 2006 NA yes infiltrating ductal carcinoma 5 black or african american NA 3 2 4 3 1 2 1 4 2 9 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.6155591 9.7968151 12.0233123 9.7401521 8.2158159 9.5978248 10.2123486 10.6323370 10.0978216 13.3285505 10.1063868 10.9581151 0.2910141 11.9707768 2.5133897 9.1122461 3.7504350 9.3986565 4.8759668 12.5343759 2.4064822 14.0654818 0.7060221 9.4952894 10.4721558 5.7284076 1.0280033 11.3228196 10.0586362 1.8759766 8.1217827 6.7558890 -1.2940663 7.4808282 10.9459379 10.1143708 9.5206234 10.8840833 10.2538995 11.2780306 8.6144338 11.0425476 14.7818962 7.9345230 9.6609643 11.3251147 12.0719533 3.8353279 4.6602384 9.3012984 11.1562213 0.7060221 10.3557463 6.0458907 8.1998966 6.3642520 10.7788435 11.7667369 10.0935199 11.0764560 12.9100007 7.5230248 10.7113146 10.0081202 11.0723632 11.4341741 4.7060387 12.0651042 11.0049628 -1.2940663 10.9584108 9.2128443 3.2308639 6.6947256 11.4769114 10.5085574 10.4267128 10.0442203 4.1654698 5.6947270 12.3830999 11.3749260 9.6241588 9.7221528 0.6122600 -0.0918160 -0.1073600 -0.1073600 0.0094887 -0.0320410 -0.0140900 3.6569000 -0.2891700 -0.3454900 0.3450200 0.1622000 1.1349000 0.2498100 0.0881130 0.8920700 -0.0226060 0.7000800 0.4358100 -0.2476700 3.6569000 -0.2773900 -0.1642800 2.9496000 -0.2956800 0.0225850 0.5829100 0.3976100 -0.1287500 -0.1287500 0.0027745 -0.1073600 0.0094887 -0.6687300 -0.2203400 -0.2203400 -0.0140900 -0.0819760 0.2362800 0.3069700 -0.0308230 -0.5718000 0.0928950 0.0928950 0.0928950 -0.0162920 -0.1570700 0.8161000 -0.3306300 0.0881130 -0.3270400 -0.3270400 -0.0226060 -0.0150540 -0.0150540 0.4070900 -0.2355800 -0.2355800 -0.2974500 0.1755800 -0.2773900 -0.1642800 -0.2863200 -0.2973300 -0.0080244 0.3976100 -0.6760900 -0.2492200 -0.6480000 0.162 0.162 -0.320 -0.320 0.000 0.000 0.407 -0.236 -0.272 0.000 0.000 -0.265 0.000 -0.286 -0.286 0.000 0.000 0.412 0.540 0.398 0.398 -0.343 -0.249 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 -0.188 0.000 0.236 0.000 0.000 -0.313 0.259 0.000 0.000 0.000 0.000 0.162 0.162 -0.320 -0.320 0.000 0.000 0.407 -0.236 -0.272 0.000 0.000 -0.265 0.000 -0.286 -0.286 0.000 0.000 0.412 0.540 0.398 0.398 -0.343 -0.249 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 -0.188 0.000 0.236 0.000 0.000 -0.313 0.259 0.000 0.000 0.000 0.000 9.3534995 3.6129304 3.8759668 10.3624658 11.8205967 7.2641170 11.1005037 9.8604542 9.1605562 1.5133897 12.0163698 11.1801956 5.6947270 2.7060442 5.9252090 8.1695653 5.5515314 12.0383574 11.3485440 10.8790935 8.9575235 0.2910141 8.5230248 10.5290101 9.1500206 6.0983585 0.7060221 -1.2940663 10.4675922 3.0279679 8.7734755 8.7572500 7.2984979 10.6689768 10.4155557 6.6718255 8.9106122 NA 7.9007980 12.2615888 9.3040935 7.0279690 -1.2940663 7.4030086 8.2058871 -1.2940663 4.4339609 NA 8.0613923 5.0074467 4.8353228 10.4500339 -0.2938894 9.2606298 10.3678191 9.9763363 6.8608585 10.7795132 14.2192751 9.8564230 7.5825583 5.5004579 10.4407506 5.3925407 NA -0.2938894 -0.2938894 11.079730 6.454233 8.597825 11.970777 10.595925 9.794167 12.534376 14.899239 10.148466 10.865282 13.177018 11.212844 9.301298 7.793504 1.706022 8.926419 10.840788 11.1554476 11.7468444 6.1898562 13.3364777 8.3960392 8.5294083 9.0403144 8.3244263 11.2400909 9.0657907 9.7263265 10.1063868 5.7060415 -0.2938894 10.8902965 5.6008585 9.0748640 10.5667400 11.1687989 10.3691543 8.0458912 8.7394640 9.6338190 10.1582822 12.2808438 9.5206234 10.3244265 9.8411089 12.1372774 9.9663725 10.6133072 10.7667369 8.9492151 7.6602370 9.5750719 7.3207509 11.1562213 10.3372180 10.3557463 7.4064805 11.2728086 10.7788435 7.5613147 13.3031042 10.3092037 10.0586362 12.3450425 11.0375179 5.9252090 0.7060221 10.3938541 10.4220030 10.1344012 TCGA-AR-A0TU 35 0 NA 709 breast stage iia t2 n0 m0 female 2006 NA no infiltrating ductal carcinoma 0 NA NA 3 3 NA 4 1 1 5 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.595268e-06 6.589149e-07 13.6363636363636 22.7272727272727 7.57575757575758 33.3333333333333 22.7272727272727 9.9201335 8.5947053 12.0383333 7.0420861 9.7338009 7.2873061 8.8509091 10.8840259 10.1893698 12.1859814 9.7652790 10.3345883 1.7838338 10.5862110 1.3244074 9.3605835 9.1565086 8.3701695 8.0437989 6.3356369 NA 11.3380815 5.2786056 9.5876791 10.4082216 4.1573025 0.9093507 11.3443480 12.2547776 0.6463470 7.8961622 5.1188248 NA 3.0248515 8.4092182 10.8980571 9.3474710 9.1893697 9.9065518 10.6550467 NA 10.0274482 13.4924551 7.9194992 10.3398250 10.4065589 9.0809662 3.9968316 NA 8.3215895 11.8006498 NA 11.2818747 3.7838443 6.6463384 4.3016901 7.3300340 12.5577299 11.2813305 10.1777194 11.9518297 4.3904957 12.0337091 10.7478226 10.3735777 10.5237755 3.4943388 12.0253914 9.3009739 -0.6755350 10.1870472 10.0144079 2.7256321 4.2313018 12.0414436 9.9219969 11.0989910 9.7848658 -0.6755350 9.0178969 12.7681952 11.8052001 10.4671551 9.7005353 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.8596851 NA 3.0792928 10.1289442 11.7751056 5.8910740 9.6614742 9.3023051 7.8659516 NA 11.6498559 11.3098071 0.3244650 NA 2.5723319 9.8057047 2.7838338 9.6553268 11.4891597 11.0698741 9.7735584 NA 9.4905729 11.3818940 5.4118736 2.8479769 NA NA 9.5568308 5.5817971 5.5142359 8.3384302 9.1955450 9.0767905 10.6316107 1.6463470 9.2603115 NA 8.2282915 12.4906514 7.9335886 6.6051802 0.9093507 -0.0906493 9.1777195 1.3244074 2.9093699 NA 6.3356369 3.2841736 2.1317541 11.4736806 1.4943132 9.9727675 11.5253085 10.0527555 5.5338623 10.2047587 13.5126510 8.2887507 5.0523289 3.1823904 11.1521495 -0.6755350 -1.6757654 NA 6.3074030 10.203610 8.530203 9.327225 10.586211 9.699992 12.357058 6.335637 7.163613 9.851398 11.249964 12.490102 12.636371 8.321589 9.036077 5.182390 8.290194 10.374258 10.917801 11.050415 4.514236 13.164250 9.793034 9.419807 9.943254 5.194773 9.902202 5.543579 4.494332 9.765279 10.918734 4.024852 9.776136 9.432934 10.452246 13.398802 10.927109 9.967815 8.427016 8.278606 5.301690 5.664261 10.722745 9.347471 10.381725 11.228103 11.537514 10.104950 10.408886 10.306690 7.789976 NA 9.050756 6.586505 11.800650 4.879000 11.281875 4.157302 10.986411 7.330034 8.070269 15.070465 10.695642 10.166367 13.289518 11.665234 3.278609 NA 10.459798 9.279333 8.891415 TCGA-AR-A0TV 66 0 NA 2288 breast stage iia t2 n0 m0 female 2005 NA no infiltrating ductal carcinoma 0 NA NA 3 2 4 2 1 3 1 1 3 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.24344952 9.17609733 11.64683062 9.32521729 9.06076563 8.84497592 10.35713156 9.47106834 10.76715637 12.66668919 9.17085118 10.35751638 -1.51457317 11.80715440 3.18566043 7.89885408 6.15765212 8.37092275 3.07018321 12.36500100 2.94465233 13.51239799 3.43942367 9.97083425 11.50551182 3.77062822 1.48522071 11.65983993 10.80065897 1.94467107 7.78900733 5.91149026 NA 3.91149026 9.99648479 9.69589762 11.01245896 9.05792649 9.85209484 10.14254478 3.57268355 11.48487404 15.35204641 5.63355036 10.77120643 12.01172554 10.06689765 5.77062822 NA 9.19431019 10.03741503 0.07025192 10.27190429 5.48522715 6.55668844 5.14343832 9.60481599 11.68397829 10.07394097 9.02438507 12.49750165 8.33853584 10.19947187 9.73799816 11.02729085 11.67288769 4.21314506 12.05472593 11.90571293 3.34320882 10.51174979 8.86135184 2.84136935 5.49645276 10.42810731 9.52756966 10.29056713 9.57732270 2.65514571 4.94465702 10.70771933 10.59961935 10.38760143 9.22921922 -0.0426520 0.0120970 0.0206230 0.0206230 0.0141900 1.0561000 0.3215700 0.3215700 -0.7618400 -0.7618400 0.7719500 0.0091705 -0.3483600 -0.7411600 2.0880000 3.6569000 0.6492800 0.0154470 -0.7575400 1.3111000 -0.3555600 -0.0268510 -0.0268510 -0.0333050 -0.0571160 -0.0571160 -0.0728080 0.6933600 -0.0018242 -0.3450400 -0.3389400 0.0206230 0.0141900 0.0183830 -0.7516700 -0.7480300 0.3624800 0.3215700 0.3215700 -0.7674000 0.0062481 -0.7618400 -0.7361700 -0.7361700 -0.0418380 -0.0757450 -0.3550600 -0.3451500 -0.7411600 -0.7411600 -0.7403700 -0.7411600 0.0154470 0.0154470 0.0154470 -0.7434200 -0.7496800 -0.7815900 -0.3555600 -0.7666300 -0.0268510 -0.0268510 0.0225850 -0.0802020 -0.0728080 -0.0388500 -0.7396700 0.6989500 0.6989500 -0.358 -0.358 -0.741 -0.741 0.000 0.000 -0.743 -0.750 -0.356 0.982 -0.767 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.693 0.000 0.699 0.000 -0.339 0.000 0.000 0.000 0.000 0.936 0.000 0.322 0.322 0.000 0.000 -0.762 0.000 -0.694 0.000 -0.152 -0.152 -0.358 -0.358 -0.741 -0.741 0.000 0.000 -0.743 -0.750 -0.356 0.982 -0.767 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.693 0.000 0.699 0.000 -0.339 0.000 0.000 0.000 0.000 0.936 0.000 0.322 0.322 0.000 0.000 -0.762 0.000 -0.694 0.000 -0.152 -0.152 8.7307789 6.5620424 3.9114903 9.8855721 11.3077971 7.0747655 11.2190890 8.3515625 8.8590704 -1.5145732 10.9850722 12.2066032 2.8775480 3.5296211 3.9770784 8.8284120 3.3921113 12.2697589 10.8783485 10.5023827 9.0321207 2.7331591 8.1943102 9.8172629 7.4070672 -0.5147793 -0.5147793 NA 9.6873501 2.8775480 4.6551514 8.3101851 6.9930210 11.1421918 9.7449695 3.4394237 8.8893035 -0.5147793 5.8161440 13.1136719 9.1072780 6.6196522 NA 8.6132207 8.2763892 NA 3.2925756 -1.5145732 6.7473216 6.8126445 2.8071488 10.4756849 NA 5.1994721 10.8253546 10.1580936 5.1576501 8.8977962 14.0502093 8.4866343 5.0851399 4.2401158 11.3986767 0.8071900 -1.5145732 1.4852207 2.9446523 15.069294 5.415965 8.921938 11.807154 9.253411 10.618690 12.365001 12.214953 11.082972 11.221370 12.924668 12.021838 9.194310 8.977080 1.485221 7.482405 11.228167 10.7523055 11.0994760 6.7613504 12.7426090 8.8526409 6.6501327 8.6538984 9.6526444 9.8292226 6.9114915 5.3307161 9.1708512 7.7212407 -0.5147793 10.2719043 6.0087872 8.0182642 8.2233188 9.2292192 10.3216712 8.7888015 8.1109353 10.2434495 7.0009262 12.7790902 11.0124590 9.8737818 9.4538931 14.5853342 9.1620650 10.0224447 10.5710306 8.1380711 -1.5145732 8.4409779 5.6848973 10.0374150 7.1326848 10.2719043 4.6349707 10.9632375 9.6048160 7.2165451 13.5079409 10.7236311 9.8893035 12.2537208 8.9569014 2.8071488 -1.5145732 10.0402947 9.4181792 9.9172462 TCGA-AR-A0TW 50 0 NA 3009 breast stage iiia t3 n1 m0 female 2005 NA no infiltrating ductal carcinoma 3 white not hispanic or latino 3 2 4 2 1 2 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.74847650 9.18320983 11.89985981 9.45369659 8.85413220 9.58658537 11.45605974 9.47449384 8.90937620 14.72005304 10.83012750 11.20223827 -0.02136504 12.97134107 2.78598988 9.19052696 4.17503750 8.34204355 9.71165407 12.51504784 -0.60625433 14.41957276 -0.60625433 9.26025976 11.18707631 9.52810262 1.39369076 12.05712314 10.60282494 -0.60625433 8.46513863 6.33031458 NA 5.32441460 10.03617925 10.16969793 9.57358528 9.37524344 9.53066734 10.99126326 NA 11.82465140 14.34058250 8.30557752 10.44454522 9.28013487 10.56140796 2.91724078 1.85311739 9.11392054 10.20223821 -1.60647397 9.83610150 6.29454356 6.92115304 4.60312781 10.50546394 11.32994609 10.91208351 10.77738051 12.52585460 7.21704358 10.04068480 9.45166796 10.42916264 10.38767606 5.05188974 11.45183711 9.57482850 -1.60647397 10.38590650 9.14605693 1.09410092 5.84488776 10.10362156 9.75287668 10.28545990 10.53674047 1.20100647 6.81574064 11.49860252 11.37649161 10.58874077 8.77845994 0.1513600 -0.0173240 -0.0003484 -0.0100370 0.3743800 0.3771800 0.2863800 3.3895000 0.4907000 0.4907000 0.4907000 0.3696100 -0.3931400 0.3297100 0.3752000 0.3752000 -0.0003484 0.3788200 -0.0163620 0.3756900 0.0028421 -0.4050100 -0.0341950 3.6551000 -0.4010200 0.2949300 0.2949300 1.0146000 -0.4110600 -0.0286980 0.0063157 -0.0003484 -0.0180110 0.3514500 -0.3914600 -0.4086500 0.2863800 1.5447000 -0.8038900 -0.4177800 -0.0057467 -0.7939800 -0.8072900 -1.1026000 0.0000000 -0.0032570 -0.7076000 -0.3877800 0.2193700 0.3752000 -0.3913500 0.4207400 -0.0003484 0.6986700 0.6986700 -0.0196590 -0.0056085 -0.0056085 -0.8637700 -0.0828690 -0.4050100 -0.0341950 1.2347000 -0.4010200 0.2949300 -0.1773400 0.4183900 -0.3807200 -0.3906800 0.000 -0.388 0.375 0.375 0.000 0.000 0.000 0.000 0.000 0.349 0.349 -0.405 0.000 0.000 -0.383 -0.106 0.295 0.000 0.000 0.065 0.226 0.775 -0.393 0.000 0.000 0.000 0.000 0.357 0.357 0.000 0.000 0.000 0.000 0.000 0.000 -0.794 0.466 0.000 0.000 0.141 0.141 0.000 -0.388 0.375 0.375 0.000 0.000 0.000 0.000 0.000 0.349 0.349 -0.405 0.000 0.000 -0.383 -0.106 0.295 0.000 0.000 0.065 0.226 0.775 -0.393 0.000 0.000 0.000 0.000 0.357 0.357 0.000 0.000 0.000 0.000 0.000 0.000 -0.794 0.466 0.000 0.000 0.141 0.141 8.28394029 3.20103784 4.43807324 9.87396158 13.21120955 7.60183763 12.58781747 8.60770389 9.29076535 -0.02136504 11.72333244 11.21223445 1.85311739 6.00838604 1.39369076 6.63685079 3.09411781 11.34859953 12.07787692 11.10060387 9.33912001 1.85311739 7.57109579 9.31179417 7.80306684 0.71562984 1.71558591 NA 10.24425382 7.93283482 4.81993892 9.04562480 4.45976602 9.05540094 9.76599712 3.25165851 8.64870487 NA 6.13514287 12.10415982 5.86128298 6.22656633 NA 6.89352239 8.75999834 1.39369076 2.91724078 NA 6.47049131 5.79737101 3.09411781 10.64367846 -0.60625433 5.62249408 10.51585711 10.54881064 5.43806991 10.54405817 14.00022602 9.39297164 6.94057084 3.67907468 11.05166452 0.97863496 NA -0.60625433 0.39363586 12.483229 6.459766 9.937192 12.971341 10.251269 10.796955 12.515048 12.653272 9.313284 10.942498 13.107170 11.890655 9.113921 7.390856 1.563597 8.530667 11.726832 11.0368560 12.4349931 5.5022001 13.0946566 9.2210189 6.1485640 9.7424044 7.9823907 10.5694565 6.8324685 8.7534257 10.8301275 4.0941178 NA 10.4267550 4.2516585 8.1469764 9.9162578 10.3456894 10.9228627 10.3738158 9.8638267 10.8407594 7.1147751 10.8519341 9.5735853 10.2094598 10.5494432 10.4563970 9.2477654 10.5723411 10.2655814 9.2422991 0.3936359 9.0206628 7.4380707 10.2022382 8.7324127 9.8361015 5.6224941 10.2356336 10.5054639 7.4215818 12.8654149 10.3336226 10.2740250 12.7130661 9.8623003 3.5635975 NA 10.0284872 10.3834256 9.2578623 TCGA-AR-A0TX 64 0 NA 1972 breast stage iia t1 n1 m0 female 2005 NA yes infiltrating ductal carcinoma 3 NA NA 3 2 3 3 5 1 2 6 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 7.144024e-06 1.976745e-06 7.14285714285714 80.8270676691729 1.50375939849624 7.5187969924812 3.00751879699248 9.885474 10.318721 12.073013 10.235314 8.663254 9.722822 11.173244 10.826473 10.565803 14.883537 10.969198 10.635594 3.928692 17.214197 3.391039 9.896274 5.675246 8.755385 9.988069 13.089463 -1.563199 12.725636 3.244202 9.171340 10.292878 6.591660 NA 10.850205 10.605514 3.436841 9.044172 8.301028 NA 4.846233 10.394669 10.143338 9.705384 10.518991 10.236124 11.729020 7.040468 10.300254 14.533125 8.264328 11.002182 11.628364 11.338652 4.414122 2.524314 9.074372 11.955126 -1.563199 11.387944 5.636514 7.767759 6.073467 10.079796 11.551072 9.510314 11.475246 12.611143 7.025556 11.025088 10.412801 11.258217 11.285660 4.811882 11.540130 11.054539 1.021835 10.473702 8.595451 4.081851 5.837721 10.436137 9.480553 10.613638 9.702457 3.137274 10.056145 12.940419 12.200677 9.570626 9.682989 -0.00346270 -0.00346270 -0.41113000 0.01922300 0.02062300 0.00875280 0.01133300 0.01133300 -0.42254000 3.65690000 0.00499690 0.00000000 0.00000000 0.40577000 -0.00470790 -0.00470790 0.00013863 1.19500000 -0.42385000 0.00360760 -0.41586000 -0.02137300 3.65690000 -0.42200000 -0.03572100 -0.03572100 -0.03572100 2.88280000 -0.00069303 -0.00069303 -0.00539920 -0.40285000 0.02062300 0.02062300 0.00875280 0.00875280 0.01133300 0.01133300 0.01237600 0.00152550 0.00152550 -0.42254000 -0.00719580 -0.00719580 -0.00719580 -0.00719580 0.00000000 0.00000000 -0.42233000 -0.00470790 -0.00470790 -0.00470790 0.00013863 -0.41058000 -0.43446000 -0.40550000 -0.00696680 -0.01106000 -0.41586000 -0.00069303 -0.02137300 -0.42985000 0.00708260 -0.03572100 -0.03572100 -0.01161100 -0.00899060 -0.41003000 0.35235000 0.000 0.000 0.000 0.000 0.000 0.000 -0.406 0.000 -0.416 0.000 0.000 0.000 0.000 -0.426 0.000 0.000 0.000 0.000 0.000 1.181 1.181 0.000 0.000 0.386 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.423 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.406 0.000 -0.416 0.000 0.000 0.000 0.000 -0.426 0.000 0.000 0.000 0.000 0.000 1.181 1.181 0.000 0.000 0.386 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.423 0.000 0.000 0.000 0.000 0.000 7.08789346 6.82054661 5.71296714 10.47370230 12.00372836 6.20250980 11.63942487 9.31882002 8.56725794 2.60677384 11.61908103 12.97840982 3.29482657 0.02176397 2.24418685 9.19922401 5.00669747 11.46440234 11.68921165 9.91611697 8.98084019 3.89627185 7.95254150 9.58658894 8.44246625 8.20005407 1.43685476 NA 10.65933494 5.66565995 8.44946646 8.54797762 9.50360375 10.29061147 9.98951102 5.41412200 8.37642106 -1.56319853 8.31489271 12.59813124 7.85047003 7.09147770 NA 6.40838579 7.40262583 1.89627185 2.75877220 3.82915950 7.55318615 5.57547269 4.74062000 11.00551059 -1.56319853 9.31105484 10.68565891 8.95647809 6.45921028 11.52794664 14.10544989 9.02836416 6.77669227 4.96040514 10.00241998 1.02183503 -0.56319853 -1.56319853 2.60677384 12.165684 6.502930 8.763271 17.214197 9.624194 10.391402 13.089463 9.448768 9.200054 10.789989 12.630367 8.200054 9.074372 7.932697 1.244217 6.361654 12.250122 11.335065 13.324729 5.492126 14.471425 8.767759 7.738338 8.684769 7.865202 11.009542 8.226376 9.213275 10.969198 6.867295 NA 10.812696 5.080696 7.838596 12.626358 11.186921 11.004085 7.596713 8.360169 10.748023 8.847293 10.940327 9.705384 10.669862 9.793294 11.388855 10.287810 10.348983 10.338463 9.417695 6.244196 10.015946 8.578579 11.955126 8.200054 11.387944 7.964319 10.769292 10.079796 7.442467 13.606649 9.858381 10.494495 12.265375 11.110151 5.636514 1.606774 9.917127 10.350105 9.564836 TCGA-AR-A0TY 54 1 1699 NA breast stage iia t2 n0 m0 female 2004 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 4 NA 5 3 1 1 4 9 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 1.24847e-06 3.121176e-07 15.5555555555556 17.7777777777778 8.88888888888889 42.2222222222222 15.5555555555556 10.1922252 9.3559512 11.3127103 8.9025418 10.4725203 8.8225938 9.3594968 10.6798659 8.6812830 15.6813983 11.1192289 11.5000875 -1.6326289 12.1832501 3.2252441 8.2861299 6.3272688 8.1254899 9.4320092 12.8467310 NA 13.1850996 2.0677075 8.7038735 11.7998084 6.0951860 1.6892097 8.7226177 10.1304788 2.5371967 7.0883653 7.6664747 NA 4.5170111 10.5512119 8.6607383 6.6846785 9.1930204 10.3934441 11.0868692 4.8102117 10.6687627 14.1621138 8.0334907 9.2972646 10.6451350 10.6293614 3.3672732 7.3039040 9.4567170 9.7220669 0.3672592 11.4355409 4.3896356 4.5170111 4.1221509 10.2894792 11.7859097 9.2643556 11.7046096 12.4136231 7.9966232 11.1179735 9.6710529 10.8668632 10.5293431 5.0254762 11.4853964 6.7851189 NA 9.8318122 10.7737373 3.1818182 5.0396911 11.3423979 10.5176484 9.6509336 10.7909077 0.3672592 7.3039040 11.2907797 10.8220798 9.3868573 9.1624946 -0.00069303 -0.00304750 0.02850200 0.02651400 -0.72765000 0.02132300 0.01419000 0.01419000 0.78929000 -0.13303000 2.83330000 0.06336600 0.01600600 -0.00360110 -0.00110870 -0.00110870 0.00069327 0.00583090 0.01614600 0.01349200 0.52853000 -0.74325000 -0.74603000 3.65690000 -0.01725400 -0.01725400 -0.02233200 0.66180000 -0.74603000 -0.00069303 -0.72332000 -0.72420000 -0.72765000 -0.71392000 0.00152550 -0.71675000 0.00833510 0.01419000 0.01419000 0.00958830 -0.00691950 -0.76021000 -0.74742000 -1.29290000 -0.73780000 -0.73512000 0.01600600 -0.53124000 0.01656500 -0.00110870 -0.00110870 -0.00110870 -0.73577000 0.00583090 0.00583090 0.00221930 0.01349200 0.01349200 -0.15809000 -0.75530000 -1.29290000 -0.74603000 0.01488800 -0.03952900 -0.75909000 -0.76809000 -0.53053000 -0.76655000 -0.76655000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 0.000 0.000 -0.743 -0.743 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.088 -0.767 0.000 0.000 0.000 0.000 -0.728 -0.728 0.000 0.000 0.000 0.000 0.000 0.000 -0.211 -0.211 -0.738 -0.738 -0.218 -0.218 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 0.000 0.000 -0.743 -0.743 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.088 -0.767 0.000 0.000 0.000 0.000 -0.728 -0.728 0.000 0.000 0.000 0.000 0.000 0.000 -0.211 -0.211 -0.738 -0.738 -0.218 -0.218 9.46002353 -1.63262893 5.06770755 10.54562006 14.49047854 5.54607953 10.18943888 8.45893971 9.02174149 -1.63262893 10.65209054 11.87114562 1.82668068 1.17459817 4.12215087 7.84704669 2.45472864 8.18904025 12.03670522 10.95058433 8.56448335 -0.63262893 8.00207745 10.36020480 6.03260341 2.89083577 8.61163016 NA 10.72536822 3.41165673 4.43335342 8.36303350 5.70711613 9.49556366 9.67047639 1.17459817 8.69369603 -0.63262893 6.16168214 11.96531898 7.01831815 7.92950875 NA 7.48880017 7.07462531 5.01112436 3.53719665 -1.63262893 3.36727321 1.87188307 2.06770755 11.17079224 -0.04781556 8.57061434 11.04718636 10.55986756 4.27415728 8.99844347 11.50665792 7.34454625 0.68920969 2.53719665 11.57976287 2.06770755 NA NA 3.75958197 14.017320 8.429313 8.137104 12.183250 10.693415 10.826954 12.846731 12.126114 9.006290 10.790028 12.250292 10.566018 9.456717 8.737954 2.826701 10.142465 13.571455 10.047186 12.630902 3.454729 13.748268 8.995712 4.634053 10.128818 8.697063 9.479289 5.333052 9.158429 11.119229 4.122151 6.724818 11.092420 4.433353 7.884011 9.616380 9.928554 11.593679 6.702656 10.008867 10.175426 3.826701 11.373733 6.684678 10.550592 10.386162 11.396899 9.170590 11.637562 9.713226 9.822594 NA 9.146329 5.565073 9.722067 6.661888 11.435541 5.859120 9.772940 10.289479 7.491775 14.098028 10.562946 11.499927 10.640188 10.491388 2.826701 5.108734 10.610440 10.764674 8.143700 TCGA-AR-A0TZ 43 1 3262 NA breast stage iiia t2 n2 m1 female 2004 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino 1 1 1 2 4 3 1 1 3 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.8694261 10.5684740 11.9511243 9.8025755 7.8571954 7.6883860 10.7312581 9.5090687 9.1036330 14.3874091 12.0190745 11.0108164 -0.0631077 13.4115939 4.5807003 9.9414139 6.9198358 8.5274293 9.3962738 13.0429553 -1.0631077 14.7430646 4.2766902 8.5702735 11.3438444 7.1117679 -2.0631077 10.5664266 10.1291350 0.9368169 7.6933984 7.1535885 -2.0631077 3.1847722 10.5346620 10.6858736 9.4316977 10.7965711 9.5367550 12.5204539 0.5218548 11.2005516 14.3543157 9.1580547 10.8672100 12.1441617 11.7063702 3.9592137 5.1462968 9.5538504 10.8278664 -1.0631077 11.1629533 8.7482170 5.2129661 4.5218046 10.0450399 12.0978166 10.6562311 11.6005115 13.2164165 6.8346872 11.1725573 11.2665615 11.8314705 10.9370184 5.8437327 11.5762960 13.8699566 -0.4781452 10.3329117 8.9716413 3.7750400 5.2943928 10.6515171 9.4832545 11.3370546 10.3272799 0.5218548 6.2129661 12.5448082 10.9934800 10.1133271 9.1346733 0.01354700 -0.00055444 0.03990200 0.00972760 0.00708260 -0.03149600 0.01056400 -0.87829000 0.00652620 0.00652620 0.01502800 0.00319100 0.01321300 0.03016900 0.88686000 -0.90911000 -0.87322000 0.00000000 -0.87315000 -0.03653800 -0.04255400 -0.88766000 0.02076300 0.02076300 -0.02356600 -0.02356600 -0.02356600 0.48251000 -0.89802000 0.01354700 0.01377200 -0.87907000 0.00708260 0.00708260 -0.05221000 -0.05221000 0.01056400 -0.87829000 -0.88719000 -0.00180140 -0.00166290 0.00652620 -1.04370000 -1.04920000 0.22453000 0.25418000 0.01321300 0.01321300 0.03016900 0.01572700 -0.87671000 -0.89909000 -0.87322000 0.00000000 -0.00332430 -0.87315000 -0.03653800 -0.03653800 -0.03490400 -0.89197000 -0.89634000 0.02076300 0.01572700 -0.02356600 -0.02356600 0.02426800 -0.86649000 -0.89664000 -0.89664000 0.000 0.000 -0.877 -0.877 -0.873 0.000 -0.873 0.000 0.000 0.000 -0.881 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.873 0.397 -0.866 -0.897 -0.874 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.878 0.000 0.000 0.000 0.000 -1.032 -0.808 -0.276 -0.276 0.000 0.000 -0.877 -0.877 -0.873 0.000 -0.873 0.000 0.000 0.000 -0.881 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.873 0.397 -0.866 -0.897 -0.874 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.878 0.000 0.000 0.000 0.000 -1.032 -0.808 -0.276 -0.276 8.6127992 NA 5.3031634 10.8666554 10.8066288 7.1083195 11.2062612 8.3102838 8.4377438 0.9368169 10.9802114 10.8230704 6.8255859 5.4125749 4.5950560 8.7721031 2.7442042 8.2855705 10.7488189 11.1701623 9.4943060 0.2588204 8.7799780 9.7998670 6.1942309 3.0243019 3.3631010 -2.0631077 9.9900894 6.7312579 7.8194855 7.2429035 5.4206576 9.8590550 10.5192195 4.1847722 9.6459261 NA 7.7149193 11.5109627 7.9480693 6.4446373 -1.0631077 0.2588204 7.6933984 -0.4781452 2.5807003 -2.0631077 2.9368358 7.3233079 1.2587601 10.1151958 NA 6.6372813 10.7675555 9.8760541 3.6647673 8.4914310 12.1459148 7.7649790 3.0661236 2.2587601 12.7706712 2.0243197 -1.0631077 0.5218548 2.1067838 14.829983 7.476001 8.702543 13.411594 9.714098 10.170162 13.042955 11.562437 9.519342 10.586547 13.055621 12.573920 9.553850 9.021651 3.222248 7.156011 13.302925 11.7842911 12.6840387 7.4545115 12.8719603 9.2976894 4.4446339 10.2688788 10.5225091 11.6740061 6.1511607 9.6250926 12.0190745 6.1656608 2.1847564 11.1507059 3.1847722 8.4688667 12.2056766 10.3636312 10.9519088 8.2877816 8.9276553 14.0567763 3.8675802 11.9022974 9.4316977 10.6736669 9.8819203 10.8133592 9.8456102 11.2248431 11.2291639 9.0002372 3.6647673 8.5062612 8.5873646 10.8278664 1.3962691 11.1629533 7.3053486 10.9171604 10.0450399 8.5227624 13.0725912 10.1930510 9.0163269 12.3073934 11.2288762 NA 0.5218548 11.4234259 10.7494207 9.7998670 TCGA-AR-A0U0 73 0 NA 1988 breast stage iib t2 n1 m0 female 2004 NA yes infiltrating ductal carcinoma 0 white NA 3 3 4 4 1 1 5 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.589149e-07 2.080784e-07 15.3846153846154 30.7692307692308 7.69230769230769 30.7692307692308 15.3846153846154 10.7384427 9.6883358 11.4572484 9.7228243 8.6773437 8.7100718 9.3146752 10.4652589 10.5917547 11.8871699 9.5965034 10.4226984 3.1061138 12.1353955 2.9686069 8.6466768 6.6579043 8.0020279 5.5535663 3.7341351 NA 7.9618265 6.7447087 9.6289573 11.1452766 8.6662673 1.6466696 13.4317715 9.8178535 1.6466696 9.8002287 7.7234923 NA 6.4540311 10.4255752 9.7087228 9.5139555 9.0162740 9.7823860 10.9547313 3.8165997 6.8512481 14.0470892 8.1279515 9.9870721 11.5809204 10.8343381 4.3471199 -0.3532843 8.6239565 13.1877733 NA 9.0750368 6.9366956 7.9204726 5.0217151 10.5811047 11.4726293 10.1814659 10.7404244 12.6821632 5.2613879 11.2556245 10.2903841 10.9028854 11.0896202 4.0389980 11.4888306 8.7733812 0.2316782 10.0813049 9.8784979 3.0272602 6.2165325 11.7701515 9.9028855 10.1091790 10.6477330 1.4540179 7.7964238 12.9121453 12.9641600 9.5031022 8.4843045 0.1077400 0.2125300 -0.0899640 0.0353830 -0.1126000 -0.2872400 0.4861300 0.3302300 -0.3557800 -0.3557800 1.1795000 0.0012481 0.0012481 -0.2880100 -0.2880100 -0.2180000 -0.3002800 -0.3002800 -0.3233300 -0.2611900 -0.3333900 -0.0220510 -0.0220510 -0.0220510 0.3309200 0.3309200 -0.2131700 -0.0131520 0.0194090 0.1077400 0.0130300 -0.0899640 -0.1126000 -0.2703500 -0.6387600 -0.2913000 0.4861300 0.4861300 0.3481100 0.2997900 0.0266540 -0.3557800 0.2991500 0.2991500 -0.3191400 -0.3191400 -0.7049600 -0.5872600 -0.3079400 -0.2880100 -0.2180000 -0.2180000 -0.3002800 -0.3002800 -0.3002800 -0.3156400 -0.2611900 -0.2611900 0.4057700 0.0000000 -0.0220510 -0.0220510 0.2087000 0.3309200 -0.2131700 0.4267100 0.4331100 -0.2745200 -0.2745200 0.000 0.000 -0.288 -0.288 -0.300 -0.300 -0.323 -0.261 -0.326 0.000 0.000 0.000 0.000 0.197 0.197 0.331 0.331 0.000 0.000 0.427 0.000 0.433 -0.275 0.322 0.000 0.000 0.000 -0.113 -0.270 -0.287 -0.287 0.486 0.370 0.133 0.000 0.773 1.129 0.299 -0.020 0.000 0.000 0.000 0.000 -0.288 -0.288 -0.300 -0.300 -0.323 -0.261 -0.326 0.000 0.000 0.000 0.000 0.197 0.197 0.331 0.331 0.000 0.000 0.427 0.000 0.433 -0.275 0.322 0.000 0.000 0.000 -0.113 -0.270 -0.287 -0.287 0.486 0.370 0.133 0.000 0.773 1.129 0.299 -0.020 0.000 0.000 8.2241054 NA 3.6466811 9.9498867 11.7897410 5.6757990 11.6910708 8.7903149 8.9717234 NA 12.1975437 11.8057028 2.9686069 NA 3.0389980 8.6081265 4.3745944 12.0865076 11.3877223 10.3822328 9.6676566 0.9685700 8.2184296 10.2017451 7.6773440 10.0119055 4.5774167 0.2316782 9.8712814 1.2316167 7.9618265 8.8240964 3.6910763 9.1667355 10.3574832 3.8946044 9.0613620 0.2316782 7.7288259 11.9531657 8.2316393 8.6897042 -0.3532843 2.3471270 9.1741537 5.2613879 0.9685700 -0.3532843 7.1264567 3.6610313 2.8946044 10.5239608 1.8165997 7.4443383 11.2588541 9.6579040 5.2905313 10.3133445 15.1199861 8.2668966 5.6124616 4.2905350 10.6396150 2.4540443 0.2316782 5.5891912 6.0475558 12.812604 6.995405 8.547544 12.135396 9.694482 11.478578 3.734135 6.571489 9.455271 10.320869 13.455892 11.396127 8.623956 9.313788 2.816600 7.821602 10.932368 9.830312 11.165576 5.038994 14.403206 8.583314 8.426396 8.462060 9.310173 8.791870 7.865845 4.691071 9.596503 9.422287 NA 10.045420 7.485881 10.064097 11.425165 9.961826 10.262766 8.239134 9.144528 8.632519 8.816602 10.384997 9.513956 10.432129 9.383079 12.002303 10.226464 8.863422 10.453629 8.863422 3.170246 9.480682 7.146523 13.187773 9.017364 9.075037 5.836502 10.566657 10.581105 7.687460 12.934894 11.613903 11.056598 13.254585 10.732149 5.304887 2.204955 10.333177 10.070843 8.880296 TCGA-AR-A0U1 36 0 NA 4052 breast stage iib t2 n1 m0 female 2004 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 4 NA 1 1 NA NA NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.733986e-06 3.121176e-07 3.2258064516129 19.3548387096774 1.61290322580645 37.0967741935484 38.7096774193548 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.1322900 1.1591000 -0.3295900 0.4522400 -0.2021200 1.0319000 -0.1238200 1.0247000 0.0637950 0.0637950 0.4610900 0.0091625 -0.3477900 0.0662290 -0.3110800 0.0873900 0.0846430 -0.3489300 -0.3506500 0.0513870 0.8451400 -0.3079200 -0.3079200 0.0982700 0.2756800 0.0606510 -0.3088600 0.1008900 -0.1731000 0.1322900 -0.2328800 -0.3295900 -0.2021200 -0.2021200 -0.3496200 -0.3525700 -0.1238200 0.4643400 0.0937660 -0.0284910 0.0852210 -0.3448100 0.4587100 -0.3373300 0.0712480 -0.3152900 -0.3767900 0.0619370 0.0943460 -0.3110800 -0.3752700 -0.3752700 0.0846430 -0.3361800 0.0989970 -0.3330600 -0.3341000 -0.3341000 -0.3326000 -0.0295840 -0.3079200 -0.3079200 -0.3551000 -0.2262500 0.1156500 -0.3180500 -0.1363900 0.1052600 0.1105200 0.000 0.000 0.000 -0.375 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 -0.308 -0.308 0.000 -0.330 0.000 0.000 0.000 0.000 0.000 0.000 -0.136 0.105 0.000 0.000 -0.330 0.000 -0.202 -0.202 0.000 0.000 0.000 0.000 0.000 0.000 -0.345 0.000 -0.315 -0.315 -0.131 0.000 0.000 0.000 0.000 -0.375 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 -0.308 -0.308 0.000 -0.330 0.000 0.000 0.000 0.000 0.000 0.000 -0.136 0.105 0.000 0.000 -0.330 0.000 -0.202 -0.202 0.000 0.000 0.000 0.000 0.000 0.000 -0.345 0.000 -0.315 -0.315 -0.131 0.000 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-AR-A0U2 47 1 2551 NA breast stage iiia t2 n2 m0 female 2004 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino 3 2 1 2 5 3 1 1 2 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.075072e-06 3.121176e-07 23.8095238095238 7.14285714285714 2.38095238095238 42.8571428571429 23.8095238095238 10.6231284 10.2304209 12.1137329 10.1488347 9.0224796 9.6191518 10.8557771 9.0480601 8.4141004 13.0366049 11.1961277 10.4235780 -1.6891946 12.6416595 4.8653992 8.5563654 6.4193366 8.1405353 12.2379425 12.7620882 2.6327335 13.2027388 2.7702370 8.6901911 11.4843337 6.8768668 2.8957679 11.5685202 10.6137372 -0.1042321 9.3795909 6.4400951 NA 4.3108127 10.4445971 10.5248282 9.8663605 8.5348145 9.9654487 11.7567328 5.2177038 8.1181676 13.5576275 10.6438841 10.5141576 11.8421941 12.1296944 4.0921736 1.4807304 9.2873767 10.4307264 -0.6891946 10.7671671 6.6236957 6.5251324 3.7370810 10.6694639 12.0603679 9.2952312 10.8896570 13.1899651 5.9761482 11.2456093 10.9872150 11.5524980 11.6647865 4.9255248 12.3523007 9.3255306 -0.6891946 10.7186116 9.6037094 3.4511847 6.3220399 10.9949038 9.9328645 10.7244406 10.2646454 1.7702370 3.5202714 10.7228532 11.0558567 9.8205876 9.4304024 0.288810 0.288810 0.459730 -0.357950 0.074064 0.040326 0.054518 -0.356910 2.081800 0.049398 3.597600 0.332700 -0.300870 0.426030 1.217000 1.234200 -0.358060 0.377920 -0.350880 0.019083 0.353770 -0.372340 0.101030 0.101030 -0.358740 -0.358740 -0.360680 0.749180 -0.348020 -0.348020 0.000000 -0.821540 0.074064 0.073546 -0.835190 -0.348470 0.054518 -0.356910 -0.380510 0.088837 -0.333230 -0.864840 -0.375720 -0.326700 0.021603 0.021603 -0.300870 -0.300870 0.051814 -0.368460 -0.363860 -0.390400 -0.358060 0.377920 0.377920 -0.350880 0.019083 0.019083 0.367390 -0.820150 -0.372340 0.101030 1.433300 -0.358740 -0.360680 0.749180 -0.833390 -0.377750 0.665120 -0.301 -0.301 -0.364 -0.364 0.378 0.378 -0.351 0.000 0.354 0.366 -0.266 -0.271 0.101 -0.112 -0.112 -0.359 -0.359 -0.348 -0.059 0.749 0.749 -0.374 -0.378 0.227 0.000 -0.358 -0.358 0.000 0.000 -0.370 -0.370 0.000 -0.349 0.741 -0.333 -0.374 0.000 -0.327 0.000 0.149 -0.299 -0.301 -0.301 -0.364 -0.364 0.378 0.378 -0.351 0.000 0.354 0.366 -0.266 -0.271 0.101 -0.112 -0.112 -0.359 -0.359 -0.348 -0.059 0.749 0.749 -0.374 -0.378 0.227 0.000 -0.358 -0.358 0.000 0.000 -0.370 -0.370 0.000 -0.349 0.741 -0.333 -0.374 0.000 -0.327 0.000 0.149 -0.299 8.2880927 -1.6891946 3.8957776 9.5239169 11.7445285 6.1894767 10.4484443 9.5157688 8.3524716 NA 11.3613416 11.2224275 6.4035694 0.6327335 3.5587452 8.3782472 5.3220399 10.1629521 11.2257583 11.7835035 8.8538444 -0.6891946 7.7804545 9.5208752 7.1749986 3.8654042 5.1934564 -0.6891946 9.9774806 7.0590059 8.6134517 10.5717322 4.7702423 9.3529988 10.8409751 3.4807434 8.4656309 NA 6.2880927 11.8975352 8.3688046 6.7537556 -1.6891946 7.4956880 9.0293455 -0.6891946 2.9546616 NA 6.1873303 5.3015401 2.8343674 11.2012670 NA 10.4589715 10.5426339 10.4779172 5.9255224 8.5092576 13.5507841 8.7875588 5.5006364 3.5962196 10.5227010 6.2823564 NA 0.6327335 1.3108054 15.153792 5.925522 9.103603 12.641660 9.567021 10.715156 12.762088 14.321537 8.696675 10.645645 12.496308 11.510332 9.287377 7.371508 3.865404 7.832413 11.894248 11.073402 12.874128 8.159435 14.034258 8.607729 6.403569 9.969917 10.815632 10.793946 5.842194 9.431699 11.196128 6.500638 NA 11.517064 5.193456 8.656994 11.204873 10.063611 11.358448 9.556942 9.333874 9.221455 6.600832 11.493258 9.866360 10.589843 10.069036 11.683950 9.800159 11.965001 11.305166 9.892955 2.632734 9.058511 6.774338 10.430726 6.539632 10.767167 6.031911 10.777909 10.669464 8.737077 12.583224 10.029774 9.987651 11.646622 9.548023 3.440102 1.310805 11.755957 10.552200 10.545929 TCGA-AR-A0U3 59 0 NA 4080 breast stage iib t2 n1 m0 female 2004 NA yes infiltrating ductal carcinoma 1 white hispanic or latino 1 2 1 2 1 2 1 1 2 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6.935946e-07 2.427581e-07 28.5714285714286 17.8571428571429 3.57142857142857 35.7142857142857 14.2857142857143 10.5722576 10.3091151 11.6114499 10.5355792 8.4261880 9.1000670 10.1038114 10.1038114 8.0071574 13.7368274 11.7078434 10.6242810 3.0970714 12.2304637 3.5121004 7.0666909 4.7447639 8.2263476 10.3271651 13.5256341 1.5121257 14.1826256 3.4381065 8.9567029 10.8919136 8.5974418 3.5824958 10.1378109 10.9817439 2.3601114 9.3065179 6.7524168 -0.8097012 4.1901723 10.1282833 11.2633114 9.4117612 11.3647877 10.6905180 11.9965222 3.2776426 12.2083742 13.8827350 9.1738517 9.7505069 11.4051002 11.0427035 3.4381065 4.9715344 9.2696588 11.2488423 NA 11.3415077 3.9450645 5.4569605 3.9975273 11.3456247 11.6248022 10.4014539 11.6174868 12.5992997 8.4870904 11.4607613 10.7032748 10.8465989 11.1108990 5.5824928 11.8537321 8.7826310 NA 10.2208412 9.9583583 2.0118892 4.7137343 8.3449922 11.0143372 10.0643870 10.3569648 2.6496155 10.5771143 12.4257395 11.0497088 10.4002365 9.0773947 0.0580810 0.6355400 0.0083351 0.0068044 -0.7497400 -0.0056757 0.0171240 -0.7523600 3.6569000 2.4426000 1.2743000 0.0465590 0.0197370 0.0069435 2.7896000 -0.6685500 0.1469700 0.0376410 0.1527800 0.0353240 -0.0956480 -0.7032500 -0.6357600 -0.4307200 -0.6290300 -0.7207500 -0.6351900 0.0669450 -0.6582600 -0.7043300 -0.7490700 0.0420240 -0.7318700 -0.7517600 -0.0094046 0.0000000 0.0171240 -0.7513200 -0.7735400 0.9591900 0.0418830 -1.1354000 -0.7444700 -0.7444700 -0.7060300 -0.7060300 0.0062481 0.7053200 0.0069435 -0.6927800 -0.7514200 -0.7595200 0.0253900 0.0376410 0.0376410 0.1527800 0.0353240 0.0353240 -0.0956480 -0.7404600 -0.7032500 -0.6357600 0.0267950 0.1209300 -0.6412300 -0.7287000 1.0659000 -1.2929000 -0.7207500 0.000 0.000 -0.669 -0.669 0.000 0.000 0.153 0.000 0.000 -0.733 -0.733 -0.703 -0.703 0.000 0.000 -0.641 -0.641 -0.658 0.000 -0.723 -0.723 0.000 -0.710 -0.741 -0.741 0.000 0.000 -0.750 -0.750 0.000 0.000 0.000 0.000 0.812 0.000 -0.638 -0.638 -0.706 -0.706 -0.196 -0.196 0.000 0.000 -0.669 -0.669 0.000 0.000 0.153 0.000 0.000 -0.733 -0.733 -0.703 -0.703 0.000 0.000 -0.641 -0.641 -0.658 0.000 -0.723 -0.723 0.000 -0.710 -0.741 -0.741 0.000 0.000 -0.750 -0.750 0.000 0.000 0.000 0.000 0.812 0.000 -0.638 -0.638 -0.706 -0.706 -0.196 -0.196 8.6227159 NA 5.7600293 10.6248022 11.3784537 5.3872936 10.6138152 8.4330145 7.6413849 0.1901723 10.9583583 11.8109574 1.7751348 3.2776426 3.0970714 8.4452028 1.9975453 10.0582249 11.1505380 10.6542092 9.0039552 4.5824898 8.1060536 10.2954278 6.2669889 4.8048848 2.5121004 NA 10.6536984 6.7293325 8.3898464 7.9845899 4.5121004 10.7853196 10.4633868 3.5121004 8.2041945 0.1901723 7.6780141 12.2649845 8.7273923 6.5738789 NA 1.7751348 8.4165860 4.9975273 1.5121257 NA 4.8906121 4.9775547 1.7751348 11.7348970 NA 8.0387972 10.7043949 10.1660219 4.6496040 8.0970645 12.2173889 10.3354693 3.9450645 2.3601114 13.6836542 2.6496155 -0.8097012 0.7751770 2.5121004 15.093659 5.475578 7.586779 12.230464 10.710793 10.979300 13.525634 11.813141 8.695985 11.525564 12.377062 10.478463 9.269659 8.327165 1.512126 7.240022 11.704395 10.6845296 12.3652557 7.4333476 14.2631427 8.6760032 5.5477274 9.9240368 9.0465996 10.1168480 5.5652133 9.6719734 11.7078434 8.0356640 NA 11.0504850 6.8696543 8.3025612 9.8158828 9.7562281 11.2434211 8.9040243 8.8430190 12.1615379 5.5121036 10.7589092 9.4117612 10.7979666 8.7900868 9.2495183 8.8286100 11.3694611 10.4237937 8.9748089 NA 8.7902540 8.5121020 11.2488423 4.4380999 11.3415077 5.9975295 9.6372572 11.3456247 7.4662984 13.5492372 9.9172436 9.8222604 12.7009382 10.4345378 -0.8097012 NA 11.1407299 10.8434670 9.4285788 TCGA-AR-A0U4 54 0 NA 3261 breast stage iia t2 n0 m0 female 2006 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 4 5 1 5 5 2 7 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.3906999 9.1113300 11.8530818 9.9986131 8.6334109 8.9382655 9.0621115 10.7986135 12.7379506 14.9491950 10.3303904 10.8598981 -0.5416180 10.5800186 2.2658269 10.5561882 7.2976885 8.3980643 10.3472284 11.0314222 -0.5416180 10.1718717 5.2398448 8.7485042 9.7798497 6.4068530 0.4584870 9.9098560 10.4894971 1.2658569 10.7273195 8.2283228 -1.5416180 4.1589267 9.4090410 10.3357693 9.0121144 9.7622659 9.7235140 10.8033359 0.0434845 8.4170377 14.8652383 7.9744020 12.0434430 10.6495444 10.6421206 3.3653706 1.7803941 9.7070058 10.4732031 1.7803941 11.2171248 6.1309103 8.5630838 5.4584837 10.8459640 11.8816011 9.9677653 11.5523978 12.6467649 5.7894032 11.4459268 11.1220855 11.1515364 11.5858347 4.6264041 12.5727155 9.3921757 6.5617737 10.6983820 9.6439801 3.1092435 6.3713742 11.5086739 9.2802592 11.3321215 10.0283408 0.4584870 4.0731947 13.1706897 11.8108045 9.6891061 10.3574644 0.42942000 0.91362000 0.03469800 0.29392000 1.20920000 -0.00081171 0.06081400 0.03095000 0.10601000 0.10601000 0.90535000 1.40680000 -0.16315000 -0.35314000 0.41047000 -0.16238000 0.59388000 -0.37368000 -0.19310000 0.39482000 0.43938000 -0.38486000 -0.38486000 0.40113000 -0.00441140 -0.00441140 -0.38592000 0.05297300 0.01086200 0.00000000 -0.38457000 -0.36837000 -0.39239000 -0.17070000 -0.37424000 -0.37424000 0.24674000 -0.38020000 0.04346700 -0.17662000 -0.33316000 1.00410000 0.40863000 -0.78790000 0.02148300 -0.36916000 -0.07238800 -0.61344000 0.48736000 0.41047000 -0.16177000 -0.16177000 0.29742000 0.03737900 0.03145600 -0.24741000 -0.19748000 -0.19748000 -0.37988000 -0.38815000 -0.38486000 -0.38486000 -0.00205850 -0.00441140 -0.38592000 0.31705000 0.00724170 -0.37705000 0.00598990 0.340 0.000 -0.353 -0.353 0.260 0.000 -0.247 0.000 0.000 0.000 0.000 -0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.318 -0.318 0.433 0.433 0.000 0.000 -0.141 -0.141 0.340 0.000 -0.353 -0.353 0.260 0.000 -0.247 0.000 0.000 0.000 0.000 -0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.318 -0.318 0.433 0.433 0.000 0.000 -0.141 -0.141 8.919965 3.628412 3.706409 9.901947 12.335098 5.467811 9.620247 9.238262 8.515421 -1.541618 12.768246 11.969353 3.950338 NA 4.186405 9.163253 5.341128 10.860165 11.655855 11.167138 8.318020 2.265827 7.769098 10.425711 6.863626 7.220037 NA NA 10.803613 2.706420 7.424270 8.864690 8.729948 9.113121 10.525247 3.316464 8.838946 NA 8.054675 12.653319 7.084194 6.252902 1.458487 NA 8.270663 4.867877 3.502878 -0.541618 5.424270 2.545944 6.469712 10.546942 4.341125 9.084194 11.074345 10.265437 4.966278 9.371375 12.737878 9.742731 6.893113 4.291375 10.646456 1.917928 -1.541618 2.265827 10.539303 12.5749916 7.3623673 10.0528097 10.5800186 9.1537134 11.1838514 11.0314222 10.0690487 8.8868452 11.7134946 12.9735690 12.4247202 9.7070058 8.4485892 0.0434845 7.9483334 11.7698078 10.100988 11.984006 5.524575 13.865916 8.979104 6.013074 9.466914 7.458485 9.963895 7.701659 6.715873 10.330390 4.239849 2.043450 10.691805 6.486391 8.852883 13.213112 11.182146 10.650778 7.772751 8.643361 10.624648 7.409770 10.636938 9.012114 10.618041 9.934725 12.030119 10.521206 11.570762 9.970732 9.482239 NA 9.325161 7.799603 10.473203 6.179585 11.217125 7.259385 10.718817 10.845964 7.904100 13.602028 10.643670 10.538970 12.905116 11.208983 2.706420 -1.541618 10.465162 9.815487 8.705226 TCGA-AR-A1AH 51 0 NA 3807 breast stage iib t2 n1 m0 female 2004 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 5 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.768666e-06 9.710324e-07 13.2530120481928 19.2771084337349 7.2289156626506 37.3493975903614 22.8915662650602 9.5640460 9.2076720 11.3074531 9.0135064 9.4399671 9.2247552 8.8781546 10.5261590 8.7956319 12.1383154 9.4329840 10.5330329 0.7457967 12.6877846 2.2312173 8.1737246 8.5479765 8.8129487 6.9630140 3.1787465 NA 11.4387475 8.4939763 9.1795775 9.7830557 5.2052165 1.8832689 6.3722226 11.4238552 1.8832689 8.8965461 7.0125698 9.9875282 2.6717915 10.0591199 12.2181695 10.0509330 9.9726771 10.4451823 10.3740466 2.8832884 9.4448352 13.2901682 8.7436065 8.3262304 10.7567309 10.3744112 3.8832884 0.4238471 8.7803071 11.2953755 -0.5760454 9.7912700 4.5937780 6.1033361 2.7457751 9.2150182 12.1672170 9.9301628 11.3335608 13.4851420 5.3896391 11.3074531 11.2018830 11.3397346 10.6065599 4.4682510 11.3222677 6.2567446 0.7457967 10.2876543 10.3167774 4.8172037 4.4011321 8.3277372 10.0686128 10.8978146 9.2919060 1.0088454 9.5919004 12.4649154 14.1347154 10.1359523 10.1458089 0.397490 0.971720 0.061508 -0.751150 -0.755130 -0.265400 0.759300 0.059651 0.222220 0.802280 -0.770730 0.053094 0.058367 0.058652 0.070243 0.070243 0.050677 0.041600 -0.763380 -0.748460 -0.766460 -0.760550 -0.745860 -0.745860 0.049540 0.049540 0.072971 0.069669 -0.732660 0.036935 0.052099 -0.744820 -0.786230 -0.765690 -0.765100 -0.757800 0.037076 0.059651 0.044715 0.066086 -0.783190 0.222220 -0.765340 -0.755730 -0.748380 -0.748380 -0.768600 -0.768600 0.058652 0.062223 0.070243 0.079015 -0.757800 0.028060 1.625800 -0.763380 -0.754610 -0.754610 -0.759030 -0.754440 -0.760550 -0.745860 0.022865 -0.719420 0.072971 0.079735 -0.794440 -0.719150 -0.719150 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.755 -0.742 -0.741 -0.741 -0.761 -0.761 0.000 0.000 0.000 0.000 0.000 0.195 0.000 0.000 0.000 -0.719 0.000 0.000 -0.751 -0.751 -0.755 -0.755 -0.758 -0.758 0.000 0.000 0.000 0.000 0.187 0.000 -0.756 -0.756 -0.462 -0.462 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.755 -0.742 -0.741 -0.741 -0.761 -0.761 0.000 0.000 0.000 0.000 0.000 0.195 0.000 0.000 0.000 -0.719 0.000 0.000 -0.751 -0.751 -0.755 -0.755 -0.758 -0.758 0.000 0.000 0.000 0.000 0.187 0.000 -0.756 -0.756 -0.462 -0.462 7.2247552 NA 3.9474137 10.6071804 11.9266870 5.7292781 11.0586663 8.3343631 7.9830027 1.2311866 11.1125427 10.6345266 2.2312173 NA 4.0385679 10.2752138 3.5113162 7.2849425 11.7774156 11.2342260 9.1627919 -0.5760454 10.1312143 8.6622600 4.8667992 7.8501199 0.7457967 1.4238471 9.9755634 4.2818392 6.4737041 9.0577587 10.2551624 8.7758986 11.1961698 0.4238471 9.6882979 5.2052165 8.6741538 12.4081847 8.2263717 8.2360324 NA -0.5760454 8.1737246 3.5531393 2.5113162 1.2311866 2.5113162 3.8842658 1.0088454 10.9276809 -0.5760454 7.9610734 11.3141195 10.9299148 3.1787465 10.4879243 12.4364797 8.5349907 2.3307592 0.4238471 11.2738466 2.0088096 NA 0.4238471 4.8501193 11.650014 9.435082 7.999395 12.687785 10.013506 12.086746 3.178747 7.120823 9.299605 11.183535 13.145221 11.137027 8.780307 8.451761 2.671792 7.237636 10.754772 10.370761501 10.978683864 5.244034582 14.313903553 10.264239788 2.671791548 9.804316268 8.960102454 9.473479081 2.883288450 4.205212634 9.432984036 9.232819502 0.008773707 10.446569821 10.559885052 8.547976461 10.968819622 9.221516797 10.444487969 8.511318199 9.509991491 8.292677776 3.378053772 10.911044606 10.050933021 10.322834454 10.883543001 11.828065419 9.002227975 11.862387189 10.492969250 9.610588418 -1.576045406 9.356704832 6.211757887 11.295375497 7.092740230 9.791270028 6.527142293 10.121257255 9.215018197 8.034879828 15.790587225 10.043158146 10.904140544 12.388015563 11.350707128 0.008773707 0.745796658 11.163002897 9.807559558 9.309551613 TCGA-AR-A1AI 47 0 NA 3296 breast stage iia t2 n0 m0 female 2005 NA no medullary carcinoma 0 white not hispanic or latino 3 3 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.31783e-06 3.81477e-07 14 34 6 28 18 9.70667300 9.26534453 11.13210375 10.39024356 8.43668739 9.44305066 10.33124324 10.83183648 11.38547919 13.81989946 10.23061805 10.81394485 2.96873590 12.11427211 1.90458043 10.89379820 6.61007253 10.10783391 11.10516150 5.81148901 -1.55469706 10.38951164 9.27647294 9.15587747 10.49126648 5.54319890 0.44519698 10.57830777 11.09307365 1.44514400 7.94102060 6.32780950 NA 6.99975427 10.10203737 10.76286086 9.66312327 9.99591240 10.65735793 12.20474175 -0.55490899 8.61759309 15.12810534 8.43157658 9.98237916 11.92721722 11.72303416 4.57444670 0.03012416 9.83102802 10.02023202 NA 8.50450996 5.18663129 9.20005309 6.07452256 8.81585302 11.78640642 10.03247434 10.71925250 13.11294244 6.40516700 11.20588554 10.71385087 11.61007253 11.80560121 4.37590131 12.22046724 8.33086177 1.25253677 10.46579840 10.19209970 3.45414957 6.05249632 11.52548352 10.12816024 10.29222292 9.75804861 3.35205226 5.36402957 13.60979760 12.49399301 10.24687394 9.73172344 0.8397900 0.2557100 -0.2955800 0.2972100 0.0424240 1.4584000 -0.0159030 0.2897500 0.2488400 0.2488400 0.2635400 0.6448400 0.1808400 0.8291800 -0.3505500 -0.3061800 0.4854100 -0.2763300 -0.2961700 -0.2851500 -0.3123900 -0.1959000 -0.1615600 -0.1598400 -0.0330190 1.0835000 -0.0358800 0.2469700 0.6724900 0.2926000 0.8137300 0.3207400 -0.6719700 -0.0160570 -0.5910900 -0.5643700 -0.0159030 0.2791300 0.2648000 -0.0083244 0.4193900 0.1876500 -0.3074700 -0.2921200 -0.3032400 -0.3032400 -0.5888400 0.1788700 -0.3123900 0.0059459 -0.2931000 -0.3228800 0.0205990 -0.2872900 -0.3525000 -0.5595900 -0.3043000 -0.3030000 -0.2981700 -0.0139760 -0.1959000 -0.1615600 -0.0487720 -0.0305640 -0.0358800 0.6459400 -0.0091525 -0.0283780 -0.0886850 0.645 0.220 -0.293 -0.293 -0.276 -0.276 -0.296 -0.303 -0.311 0.158 0.000 -0.160 -0.160 -0.285 0.000 0.000 0.000 0.272 0.272 0.646 0.247 0.000 0.000 0.000 0.000 0.297 0.297 -0.577 0.000 1.447 1.447 0.000 0.259 -0.287 0.363 0.249 0.249 -0.303 -0.303 0.000 0.000 0.645 0.220 -0.293 -0.293 -0.276 -0.276 -0.296 -0.303 -0.311 0.158 0.000 -0.160 -0.160 -0.285 0.000 0.000 0.000 0.272 0.272 0.646 0.247 0.000 0.000 0.000 0.000 0.297 0.297 -0.577 0.000 1.447 1.447 0.000 0.259 -0.287 0.363 0.249 0.249 -0.303 -0.303 0.000 0.000 7.464756 NA 4.327809 10.584397 11.783484 4.415326 10.439165 10.267820 7.802101 -1.554697 11.458837 11.639746 2.837479 NA 3.999757 9.788907 4.767093 10.818575 11.829680 11.327618 9.047864 -1.554697 9.177333 10.476867 7.582157 7.950977 2.693097 NA 10.426376 2.030124 7.739787 8.637458 9.245257 8.979468 11.020468 3.252522 9.566699 6.678785 8.602513 12.475402 7.378857 7.092624 -0.554909 5.984325 7.306252 5.748947 0.445197 NA 7.470305 2.046875 4.303145 10.660395 5.290657 6.871431 10.319763 9.914807 6.233067 10.608815 13.851503 9.379594 6.145606 4.375901 10.582797 -1.554697 5.226524 3.399363 5.456392 8.446574 9.977521 7.964802 12.114272 9.538583 10.693686 5.811489 6.711952 9.174277 12.202972 13.396678 11.808068 9.831028 7.582157 1.767104 7.707260 10.729122 11.171597 10.908945 6.500448 13.404033 9.608815 8.142133 8.598718 9.490243 9.639559 8.096217 5.748947 10.230618 9.557605 NA 10.706085 8.569287 9.702365 13.317889 11.057573 10.170532 5.912772 7.312445 9.254934 9.246874 10.113058 9.663123 9.722453 9.894830 12.368122 9.209208 11.720708 10.730279 9.447277 NA 9.195002 7.200053 10.020232 9.666149 8.504510 4.399363 10.460232 8.815853 8.365667 14.109973 11.658118 10.198382 13.810907 11.745375 4.059874 1.030124 11.007408 9.792233 9.468920 TCGA-AR-A1AJ 83 0 NA 3072 breast stage i t1 n0 m0 female 2005 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 3 4 1 5 5 4 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.548757e-07 6.935946e-08 36.8421052631579 21.0526315789474 5.26315789473684 15.7894736842105 21.0526315789474 10.3399061 9.7096815 11.9242945 10.0505431 7.6629531 9.9247251 9.2625255 10.5949538 10.4952634 12.9031073 9.9654787 10.8094393 2.7169909 10.8331841 2.7994604 10.1826795 5.8193540 9.1183745 6.7639559 3.8774596 NA 10.9826770 9.3944018 9.1425965 10.5446626 6.0807408 0.6295665 11.1869939 10.6397086 2.8774498 9.2433197 8.1273820 0.6295665 5.3160299 10.2294430 9.9804694 9.5469022 10.8741913 9.8875073 11.8318071 0.9514386 7.1725615 14.2211694 8.6059080 9.3785615 11.3674113 10.8408102 3.7169909 NA 9.7894016 10.9635240 NA 10.9865323 6.4998953 8.6379587 5.8389845 9.9062363 11.9995364 10.4202860 11.4931357 13.1093736 6.2442401 11.3046051 11.0144461 11.3054872 11.7601007 5.3977140 11.5104529 8.0724735 -0.3705268 10.9409947 9.5632209 2.3221878 7.1293758 11.8207437 10.0828008 10.1343492 9.7003220 3.2733816 8.1802772 12.6596800 12.3032809 10.5386733 9.5152265 4.8165e-01 4.9003e-01 -3.3743e-05 1.3806e-01 0.0000e+00 -1.0710e-01 7.0386e-02 6.3509e-02 6.1661e-01 1.0953e+00 1.0731e-01 2.6687e-01 1.1532e+00 -6.8261e-02 -6.8261e-02 -6.8261e-02 -9.5384e-02 -1.2953e-01 -1.6485e-01 -1.6485e-01 -1.5579e-01 -1.4695e-01 -1.4528e-01 -1.4528e-01 2.0042e+00 2.0183e+00 -1.8471e-01 -3.2314e-02 -3.6011e-03 -3.6011e-03 4.7268e-02 -3.3743e-05 0.0000e+00 0.0000e+00 -1.0710e-01 -1.0710e-01 7.0386e-02 6.3509e-02 6.3509e-02 7.2158e-02 1.4087e-01 -3.2935e-01 -2.7617e-03 -2.7617e-03 -2.7617e-03 1.2152e-01 -1.6967e-01 -1.7152e-01 -6.8261e-02 -6.8261e-02 -6.8261e-02 -6.8261e-02 -1.2953e-01 -1.2953e-01 -1.2953e-01 -1.6485e-01 -1.6485e-01 -1.6485e-01 -1.5579e-01 3.5383e-02 -1.4695e-01 -1.4528e-01 1.3376e-01 -1.3147e-01 -1.8471e-01 -3.2314e-02 3.5577e-01 -1.5311e-01 -1.7431e-01 0.267 0.267 0.000 0.000 -0.130 -0.130 -0.165 -0.165 -0.156 0.000 0.000 -0.145 -0.145 0.106 0.106 -0.108 -0.108 0.000 0.482 0.000 0.000 0.360 -0.153 0.000 0.000 0.000 0.123 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 -0.104 0.219 0.000 0.122 0.000 0.000 0.267 0.267 0.000 0.000 -0.130 -0.130 -0.165 -0.165 -0.156 0.000 0.000 -0.145 -0.145 0.106 0.106 -0.108 -0.108 0.000 0.482 0.000 0.000 0.360 -0.153 0.000 0.000 0.000 0.123 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 -0.104 0.219 0.000 0.122 0.000 0.000 7.7944373 0.2144979 5.4750200 10.1368293 11.2170733 6.0859260 11.2126130 10.5792365 8.0914391 4.4624188 12.6065417 11.5987008 2.7169909 2.4368814 4.1530919 8.9103009 4.7792755 11.9397169 11.1604242 11.3219278 8.8727041 3.4875121 8.3743640 10.3629693 8.6861678 7.5778971 -1.3703403 NA 10.9250122 4.1841216 7.9804692 8.5075810 9.2069589 9.7260938 10.9649206 6.4750200 9.4360798 NA 8.6010736 11.9899658 7.7116794 7.1686892 -0.3705268 2.0889557 8.7156666 1.4369081 3.8389820 NA 8.3437756 3.0922413 7.1879508 10.7626724 1.7994604 9.3659322 10.7588132 9.9195491 7.1530919 11.3989548 14.6961029 9.9355919 6.3910820 5.6956181 10.6807391 0.6295665 2.0889557 2.7994604 6.2368599 13.0608959 10.6358563 8.5676394 10.8331841 9.9793643 11.3166871 3.8774596 8.7575244 9.0930546 10.9166654 13.6902683 12.0468553 9.7894016 7.9218516 0.2144979 7.2841662 11.9255860 11.684304 11.297085 4.357453 13.353456 8.720966 8.518274 8.973826 9.410070 10.458793 8.859551 7.309011 9.965479 9.518274 NA 10.732162 7.872704 9.759451 12.609045 12.381283 10.263434 7.745874 7.654670 10.610741 9.325628 11.268523 9.546902 10.423946 9.726245 11.948355 11.957223 10.897195 11.309450 9.063116 6.690226 9.476243 7.566168 10.963524 9.140294 10.986532 7.113346 11.751933 9.906236 8.247916 13.545830 10.519794 10.228048 12.965967 10.809439 7.229443 3.088956 10.681419 10.033075 10.160424 TCGA-AR-A1AK 70 0 NA 3159 breast stage i t1 n0 m0 female 2006 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 1 1 4 3 3 4 4 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 1.456549e-06 3.81477e-07 21.4285714285714 46.4285714285714 5.35714285714286 17.8571428571429 8.92857142857143 10.3509942 10.1879323 11.6208916 9.6322579 9.2706116 9.2435748 9.8660042 9.5862455 10.5371823 12.5706698 11.7078749 10.4570669 2.8313503 12.9616425 2.9833676 9.5825300 6.3052884 8.5622997 9.4935319 12.3218746 2.0877004 13.2191958 5.5317963 9.9948623 10.4179893 4.4943260 -0.3386152 11.1038582 9.2659863 1.4687918 8.3232111 7.6642482 1.2464081 5.4028995 9.8848314 10.2917001 10.2102549 11.1170171 9.7823188 11.2777520 8.4687877 10.6934787 14.8234702 8.7219939 9.6768479 11.6446047 11.8044973 5.8806023 2.4687918 9.4279619 12.2920414 0.9833858 10.8073651 5.5562516 7.3088914 6.3549193 10.3756785 11.5283255 10.1874430 11.9143940 12.8634802 8.7738724 10.7034343 10.6127941 11.2037394 11.5986229 4.9652117 11.3685764 10.7640649 -1.3386152 10.5884701 9.5914311 3.8393550 6.8708862 10.6145381 9.7574892 10.7268491 10.2270111 3.3618666 8.3549198 13.2260588 12.4648578 9.8206736 9.6236059 0.7710600 0.7910800 -0.0107840 -0.0080175 0.0094491 0.4537700 -0.0113350 -0.0048461 -0.4421000 -0.4421000 0.8070100 0.7596000 -0.0011087 0.0016209 3.6569000 -0.4252500 0.3416100 0.3416100 -0.4199200 -0.0056757 -0.0103700 -0.0569810 0.7581500 0.7581500 0.6377400 -0.0619580 -0.0619580 0.7974300 -0.0271240 -0.0271240 0.0012481 -0.0062791 -0.0050436 -0.0034627 0.3942900 0.3942900 -0.0113350 -0.0048461 -0.0168410 -0.0191770 -0.0013858 -0.4421000 -0.0215100 -0.0215100 -0.0215100 -0.0682270 -0.0011087 -0.4547900 0.0016209 -0.5193800 -0.4424500 -0.4424500 0.3416100 0.3416100 0.3416100 -0.4199200 -0.0056757 -0.0056757 -0.0103700 -0.4497500 -0.0569810 0.7581500 0.0123760 -0.5301200 -0.0619580 -0.0246610 0.0070826 -0.0381700 -0.0381700 0.760 0.000 -0.442 -0.442 0.342 0.342 -0.420 0.000 0.000 0.400 -0.450 0.000 0.758 0.000 0.000 0.000 0.000 0.771 0.771 0.000 0.797 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.394 0.394 0.000 0.000 0.000 0.000 -0.442 0.365 0.000 0.000 0.000 0.000 0.760 0.000 -0.442 -0.442 0.342 0.342 -0.420 0.000 0.000 0.400 -0.450 0.000 0.758 0.000 0.000 0.000 0.000 0.771 0.771 0.000 0.797 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.394 0.394 0.000 0.000 0.000 0.000 -0.442 0.365 0.000 0.000 0.000 0.000 8.3249910 0.6614760 5.6156282 10.7024076 11.8695149 6.8571749 10.8705816 9.7480004 8.7340345 4.9093603 11.7696307 11.8991598 6.5501757 3.3052847 4.5683240 8.2779820 4.8111781 11.0437868 11.6345922 11.3840271 9.5084903 2.3618806 7.6185353 10.3897787 8.1147038 5.4687886 1.6614304 -1.3386152 11.1308204 7.7194244 7.2798186 7.7932899 8.5425471 10.5446528 10.4687879 4.1532865 8.4411523 5.1043744 8.1849948 11.8898007 8.7261756 7.7829668 -1.3386152 6.8902521 8.8574203 2.5683240 3.7488905 -0.3386152 6.8363584 5.0202177 4.8512593 10.0348419 1.2464081 9.8487850 10.3223203 10.0079467 5.6272187 10.4887757 14.1125475 9.5325681 4.5440773 4.5683240 12.6163562 1.2464081 -1.3386152 0.2463473 1.8313503 14.828846 4.519416 8.333858 12.961642 9.949145 10.520579 12.321875 12.362739 8.554735 11.211218 13.253715 11.637639 9.427962 8.392752 1.983349 7.895053 11.296924 11.2274870 11.4972860 7.3893534 13.1663097 8.4607147 7.4460676 9.0929305 9.2715349 10.1734623 8.3391525 6.6726601 11.7078749 6.7855545 4.8313605 10.6002774 5.8708874 7.2536660 10.7123019 10.3052892 10.4079473 8.3944481 9.0548235 13.0393213 6.4879815 11.7442672 10.2102549 10.8416530 9.2054314 11.4937296 10.5611675 10.5394839 10.8385410 8.7673416 3.0537543 8.9910388 7.4588028 12.2920414 5.7275230 10.8073651 4.7058286 11.0279054 10.3756785 7.2798186 13.1783025 10.4041635 9.7561705 13.1566010 9.6178090 4.3052920 -0.3386152 10.3294315 10.0418940 9.7881374 TCGA-AR-A1AL 60 0 NA 2971 breast stage iiia t3 n1 m0 female 2006 NA yes infiltrating lobular carcinoma 3 white not hispanic or latino 1 2 3 1 4 3 3 3 4 3 4 3 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.387189e-07 21.7391304347826 21.7391304347826 0 21.7391304347826 34.7826086956522 11.01256623 10.31329631 11.99157184 10.18743645 8.10745772 9.45847880 10.50041130 10.05820270 10.73330197 12.02045803 10.64085967 10.57385534 3.15991976 12.74468649 4.13393336 9.15508663 5.80378241 8.99552466 9.54671160 12.30503862 4.13393336 13.05241389 5.95989995 9.37840194 10.59514902 4.63797534 NA 11.34123732 7.99281544 3.52249522 8.05992953 7.57173899 2.35256080 4.87613381 10.41394150 10.80403903 10.59007912 12.87619357 10.54301238 12.00910695 10.45520226 10.48217539 15.08882693 9.42595542 9.94456010 11.92858222 11.56065225 5.74488764 -1.64746744 9.31835458 12.43538469 -0.64746744 11.16655189 5.23521391 6.22908797 4.23521391 10.75771185 12.09771942 10.38771310 12.48346262 13.15387454 7.83839969 11.05863463 10.90065771 11.55408171 11.70019173 5.55224180 11.98249610 11.16855398 -0.06250494 10.28293805 9.20587998 3.88831464 5.56202257 10.61260776 10.48731751 10.35749306 9.77253051 3.15991976 10.63739443 12.90679945 12.79116731 10.18031000 9.43471933 0.79510000 0.78121000 0.00000000 -0.00346270 -0.00160400 0.00152550 -0.00207840 -0.00207840 -0.00277070 -0.00277070 -0.00277070 0.00208050 0.00208050 0.00402430 0.00402430 0.00233020 -0.00110870 -0.00110870 -0.00083160 -0.00249380 0.00180300 -0.00539920 -0.00641660 -0.00641660 -0.01202400 -0.01202400 -0.01202400 0.00208050 -0.00290910 0.00499690 0.00583090 0.00000000 -0.00160400 0.00402430 0.00152550 -0.00249380 -0.00207840 -0.00207840 -0.00207840 0.00208050 -0.00193990 -0.00277070 -0.00235530 -0.00235530 -0.00235530 -0.00235530 0.00208050 0.00208050 0.00402430 0.00402430 0.00233020 0.00233020 -0.00110870 -0.00110870 -0.00110870 0.00058259 -0.43344000 -0.43344000 0.00180300 -0.44878000 -0.00539920 -0.00641660 0.00013863 -0.01202400 -0.01202400 0.00208050 -0.00346350 0.00346870 0.00346870 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.410 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.776 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.410 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.776 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.67224216 0.67446065 5.86826944 10.07281459 11.03271008 6.56761846 10.96128718 10.85998344 8.14492127 6.51747728 11.54131373 10.31184423 3.25946835 1.67450585 3.84442583 8.67562507 3.60049575 10.18427347 11.44384044 11.33378083 9.08981776 1.52250778 8.02322652 9.92858218 7.38047665 5.57173748 -0.06250494 -0.64746744 11.72978089 7.77253034 7.69908378 8.13556873 7.69686601 10.01872777 10.76143081 5.77042207 7.91481264 0.35253256 8.08388934 13.05701441 8.47151143 7.51496175 -0.64746744 2.60050765 8.52624765 NA 3.90715987 0.67446065 5.92999925 5.71407513 4.02499335 10.13965674 0.67446065 10.26695551 10.06466746 9.85440761 5.35257140 9.98010430 11.70737069 9.44135856 3.87613381 3.90715987 10.87392544 1.52250778 NA 1.15995204 0.93757038 12.063374 4.418662 8.588585 12.744686 10.438043 10.800687 12.305039 12.788436 9.450319 11.198060 13.997975 11.660625 9.318355 6.970956 NA 7.950623 11.653209 11.590378 11.253437 8.047798 13.880352 8.814050 6.566890 8.862345 8.680123 10.178547 6.856396 7.156701 10.640860 4.259461 2.159920 11.002949 7.182293 6.382797 11.688240 10.325550 10.343738 8.198060 7.842418 12.707715 6.391489 11.842260 10.590079 10.102440 9.286261 11.445658 9.724891 10.545480 10.539613 9.656922 NA 9.357030 8.543062 12.435385 6.864324 11.166552 7.753450 10.983065 10.757712 7.785112 14.145564 10.045622 10.437379 13.296779 10.548250 4.812000 NA 10.826783 10.399353 10.123647 TCGA-AR-A1AM 52 0 NA 2991 breast stage iiia t3 n1 m0 female 2006 NA no infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 3 4 3 3 3 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.387189e-07 20.8333333333333 29.1666666666667 8.33333333333333 29.1666666666667 12.5 10.289032 9.449326 11.883338 8.850438 8.357480 9.233362 11.570961 9.509327 10.248530 12.804420 11.532750 10.255221 3.406387 13.814648 3.669424 9.439812 7.357480 8.661890 8.259387 12.872976 3.958926 14.341849 7.436137 9.623032 10.827613 6.870186 NA 11.544408 9.263541 3.958926 8.413884 7.704070 -1.500626 4.649248 10.108677 9.922089 9.536359 11.269750 9.804420 11.295335 9.348904 10.912333 14.402792 8.134419 10.703761 10.988845 10.619413 6.326047 3.958926 8.377550 11.467626 -1.500626 10.335154 5.618438 6.015199 4.821425 10.405262 11.680030 10.584971 11.830976 12.780994 8.763941 10.860072 10.660870 11.110293 10.997101 4.975231 11.569116 11.882258 0.499476 10.317282 8.965065 4.454163 5.069354 10.385195 9.210305 10.248949 9.404133 4.023060 11.512821 13.686387 12.578734 10.710474 10.225291 0.01070300 0.42704000 -0.01298900 -0.01298900 -0.15567000 0.44816000 0.00138680 0.00138680 0.02006300 0.02006300 -0.00027724 -0.00981850 -0.00459770 0.01000600 0.01000600 0.01000600 0.00346870 0.00013863 0.00097064 -0.11604000 0.00666530 -0.31576000 0.00485790 0.00485790 0.00513590 0.00513590 0.00513590 0.02272500 0.01028500 0.01070300 -0.15123000 -0.01298900 -0.15567000 0.27001000 0.00000000 0.00000000 0.00138680 0.00138680 -0.00180140 -0.00965180 -0.00027724 -0.43344000 0.02174400 0.02174400 0.02174400 0.02174400 -0.44005000 0.06923900 0.01000600 0.01000600 -0.43669000 -0.43669000 0.00013863 0.00013863 0.00013863 0.00097064 -0.11604000 -0.11051000 0.00666530 -0.43181000 -0.31576000 0.00485790 0.01936300 0.00513590 0.00513590 0.00833510 0.00332990 -0.43225000 -0.43225000 0.000 0.000 0.000 -0.437 0.000 0.000 0.000 -0.116 0.000 0.000 -0.432 -0.316 0.000 0.000 0.000 0.000 0.000 0.000 0.416 0.000 0.000 0.000 -0.432 -0.151 -0.151 0.000 0.000 -0.156 -0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.433 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.437 0.000 0.000 0.000 -0.116 0.000 0.000 -0.432 -0.316 0.000 0.000 0.000 0.000 0.000 0.000 0.416 0.000 0.000 0.000 -0.432 -0.151 -0.151 0.000 0.000 -0.156 -0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.433 0.000 0.000 0.000 0.000 0.000 8.38061258 -1.50062605 5.05408874 10.95070985 11.16416824 7.29628486 11.93803072 8.81427451 9.15948564 3.30686008 12.63520803 11.20835850 3.95892617 4.22741763 3.62878526 7.81917064 4.80327871 10.24265014 11.35378277 10.41500471 9.69302411 6.29391485 7.67691827 10.37831599 7.41836201 5.91735060 0.82146532 NA 10.65463316 6.31967754 7.03088008 7.87670909 8.88643888 10.36003489 10.16083147 5.12885427 8.95070985 0.08447252 8.28413375 12.40704667 8.88320290 8.04639338 -0.50042195 1.66943502 9.17369113 5.28085983 4.28085983 1.95891690 5.49949832 6.41477993 4.35748163 10.05312804 2.74743037 9.00431767 10.65873936 9.77387685 4.94244413 9.68189319 12.06507690 9.10682908 3.30686008 4.38214153 10.15144738 0.08447252 NA 2.08447252 2.19993927 13.259189 4.747425 8.713818 13.814648 10.481779 10.572301 12.872976 12.568781 9.204267 10.578984 12.614624 9.964555 8.377550 8.491021 NA 7.351248 11.409767 11.637931 12.350174 6.287402 13.782727 9.457326 6.554781 9.275109 7.073145 10.804189 7.578983 7.132494 11.532750 8.061741 3.669424 10.633604 7.733118 6.781243 11.646067 10.458776 10.539103 8.714826 9.311676 10.788077 6.766285 11.773321 9.536359 10.326444 9.957393 11.202970 10.029905 10.395074 10.604425 8.145157 NA 9.784936 7.242381 11.467626 7.664405 10.335154 6.357480 11.001542 10.405262 7.473914 13.932139 10.209875 10.043980 12.840253 11.408454 3.143361 NA 10.248111 9.768626 9.964044 TCGA-AR-A1AN 46 0 NA 2920 breast stage iia t2 n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 white hispanic or latino 2 2 4 1 NA NA 6 4 5 4 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4.161568e-07 1.387189e-07 43.75 25 0 25 6.25 11.08671903 9.34184569 12.04583422 9.08557018 7.67939354 8.58237987 10.49715536 10.13038214 10.31189791 12.90600134 11.18525902 10.41940247 -0.53011402 11.94199664 3.86225300 10.18804517 7.14942095 7.86868430 9.33644675 13.29559497 0.05491792 12.91954055 4.94567324 9.27709418 10.42667968 7.11379633 NA 9.17643648 11.09473592 3.22482749 7.62222537 6.66469758 0.05491792 4.27729298 9.86814981 10.90769257 9.86064689 11.82735505 10.91236567 11.72201456 0.46999014 11.63657437 14.94600632 8.63839935 9.98317461 11.19807358 10.68152464 3.51433691 1.92937441 10.09382199 11.66761795 0.79185574 11.62744533 4.75534161 7.23481168 5.15644111 10.17945519 11.69016764 9.95928678 13.72182968 12.55416756 8.05490273 11.05419838 10.54797116 11.05231773 11.62712952 4.75534161 12.95091999 10.82225987 1.92937441 10.40878498 9.65295555 2.47713330 4.75534161 9.43355915 11.52488393 10.40215521 9.94466038 2.27730042 8.74140361 12.53687057 11.71445298 9.71786797 9.98957672 0.44139000 0.92837000 0.01181800 0.93650000 1.23510000 -0.00609040 0.01642500 -0.01161100 -0.41838000 0.00458000 0.48285000 -0.43496000 0.00013863 0.00000000 0.46724000 0.03340800 -0.00970170 0.00041593 1.46920000 -0.00263220 0.01866300 -0.44921000 -0.44921000 -0.44921000 0.02820000 0.02820000 0.02567100 0.46741000 0.05266800 -0.00968060 -0.46259000 0.01181800 -0.48656000 -0.49423000 -0.00609040 -0.48544000 0.01642500 -0.01161100 0.00291330 0.00083195 0.01279500 -0.50984000 -0.02425100 0.01084200 0.01084200 0.01084200 0.00013863 0.05096100 0.00000000 0.00000000 0.00360760 0.00360760 0.01530800 0.00041593 0.00041593 -0.01133500 0.01852300 0.04259000 -0.48565000 -0.48238000 -0.44921000 -0.44921000 -0.01944100 0.07484000 0.02567100 0.02454800 -0.03585700 -0.45725000 -0.07200700 -0.410 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 -0.449 -0.449 0.000 0.000 0.000 0.000 0.000 0.412 0.000 0.000 0.000 -0.385 -0.413 -0.413 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.410 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.462 -0.449 -0.449 0.000 0.000 0.000 0.000 0.000 0.412 0.000 0.000 0.000 -0.385 -0.413 -0.413 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.98564046 -1.52990571 6.01683502 10.18890146 11.41373734 6.22569524 11.99178627 9.19546006 7.98802339 4.32792444 12.26760201 11.70636733 3.17037377 2.17037377 2.79187657 8.22148465 3.59922256 10.49680975 11.62839241 10.90117689 9.28532384 5.83626248 8.24637341 10.34184569 6.44722046 8.50336345 -1.52990571 -0.53011402 11.14347040 7.32168913 7.20125942 8.80197699 5.19786146 9.50880457 10.24184257 3.89620402 8.15117894 -1.52990571 7.38880345 12.34597775 6.40067796 7.90456900 -0.53011402 2.79187657 8.39029322 -1.52990571 4.49230827 0.05491792 4.37683213 4.30283081 2.05491792 10.72968379 1.46993806 9.47134864 10.74023579 9.99790615 3.82749387 9.60949181 11.36077473 8.35411095 1.46993806 3.71786831 11.14501543 2.17037377 0.79185574 4.32792444 2.46993806 13.3182495 5.6891090 10.1227854 11.9419966 11.5793402 11.1740603 13.2955950 13.2918639 9.0947359 10.9853940 13.2252976 11.0022964 10.0938220 9.3602047 0.7918557 7.0052158 11.3696750 11.4491870 12.7400898 7.3798332 14.0396166 9.1029357 5.3888026 9.4139205 7.7343831 10.6731661 6.4006780 8.2381248 11.1852590 4.4472221 0.4699901 11.3726924 6.4642942 6.8730380 10.8506721 10.4540029 11.0221293 8.6927354 9.1388255 13.3455939 5.5574040 10.1922784 9.8606469 10.4818665 9.7639868 10.9535044 10.0684583 10.6888064 10.6699195 9.5494252 1.7918557 10.0582663 6.9456744 11.6676179 5.1564411 11.6274453 8.3962366 10.9116501 10.1794552 7.1065650 14.7173856 10.8827749 10.6996606 12.2435949 10.5574033 0.7918557 NA 10.2558017 10.5712597 9.8142364 TCGA-AR-A1AO 47 0 NA 2618 breast stage iia t1 n1 m0 female 2006 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 2 2 3 3 1 1 3 6 4 7 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 1.040392e-07 33.3333333333333 33.3333333333333 0 16.6666666666667 16.6666666666667 10.14276225 9.79716217 11.38832673 9.66677984 8.30554195 9.85204395 9.12207061 10.32525699 10.92455645 12.99534057 10.35197775 10.52857650 3.97911076 11.54008226 3.88600379 10.85076122 5.62296841 8.93814844 8.66678002 10.42998025 0.39418485 10.83294198 7.42757349 9.51114383 10.14862008 5.43854570 -0.02092584 10.86150096 10.30479290 4.32488979 9.15570143 9.24667956 NA 4.78646568 9.94921858 10.02578199 9.50005869 10.68790918 9.58150227 11.11524931 6.91771220 8.88600318 14.81603416 7.51244261 9.10925424 11.16502047 10.51373973 4.67955329 0.39418485 9.79289390 12.17161095 -0.60581515 11.15570136 6.29501767 8.67376063 7.23020013 10.57343721 11.65301056 10.08152578 11.69921434 12.63925713 6.92942531 10.75060207 10.42898695 11.15362226 11.22565530 5.09459079 12.08086951 9.47629925 -0.60581515 10.70986579 9.20230997 3.65040844 7.26451485 10.46225666 10.08720146 10.17714829 9.75883198 3.48160894 8.40117733 13.01328111 12.64422644 9.70135100 9.59075227 0.0451410 0.0451410 0.0231450 0.1629500 -0.0076101 -0.0238400 -0.0143660 -0.0143660 -0.0220580 -0.0220580 0.0245480 0.0018030 0.0018030 0.0259520 0.0259520 0.0259520 -0.0280810 -0.0280810 -0.0751510 -0.0289010 -0.0062286 -0.0372180 -0.0372180 -0.0372180 -0.0062286 -0.0062286 -0.0062286 0.0793030 0.0188560 0.0451410 0.0000000 0.0231450 -0.0821370 -0.0076101 -0.0238400 -0.0238400 -0.0143660 -0.0143660 -0.0143660 0.0221640 0.0221640 -0.0220580 0.0237060 0.0237060 0.0237060 0.0237060 0.0018030 0.0018030 0.0027745 0.0259520 0.0259520 0.0259520 -0.0280810 -0.0700010 -0.0700010 -0.0102970 -0.0289010 -0.0289010 -0.0062286 0.0217440 -0.0372180 -0.0372180 -0.0754780 -0.0062286 -0.0062286 0.0104890 0.0435820 0.0020805 0.0081959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.53114125 NA 6.47096629 10.13730153 11.60573428 6.53661401 10.81568902 9.99149974 8.91823147 5.94873866 13.22382332 12.16610586 4.00886333 -1.60603472 3.67954766 8.31747774 5.02350820 11.19464563 11.40502783 10.15112337 8.73733591 2.97911076 8.16563965 10.51373973 8.12377068 6.86988374 6.28896756 NA 11.73205072 5.53370039 7.79289374 8.50658965 8.18856610 10.19316458 9.96448022 4.22704019 9.05057489 1.97911076 8.33959395 12.81680625 7.39415054 7.83086186 0.71606903 5.34834575 7.76701514 5.30104251 3.64207769 4.12206802 7.76483776 3.20870453 4.82041386 10.41513002 2.30103153 9.91378640 10.49809356 9.81516295 5.86988374 10.49020638 13.28593384 10.97746798 4.94874100 4.78646568 10.20913311 NA -0.60581515 -0.02092584 3.14903169 11.4819511 7.4303237 8.5876755 11.5400823 10.1824607 10.7759635 10.4299803 10.5381710 9.3025427 10.9142777 13.3074136 11.2197053 9.7928939 8.2505756 -0.6058152 7.4656121 10.9963850 11.525525 12.070548 5.554021 13.742427 9.218305 8.180420 8.367130 7.861756 10.327136 8.466953 7.773528 10.351978 6.795029 5.348346 10.913541 7.828778 7.957842 11.576700 11.091335 10.756368 8.326365 8.619358 10.469295 7.886003 10.684212 9.500059 10.538490 9.935247 10.989641 10.804071 10.487238 10.825125 9.392035 3.038015 9.676173 7.602628 12.171611 7.745089 11.155701 7.911820 11.228599 10.573437 7.608712 14.066382 10.680708 10.940804 12.570245 10.563136 5.979113 1.394130 10.355238 10.205123 9.787541 TCGA-AR-A1AP 80 0 NA 2856 breast stage i t1 n0 m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 1 2 4 2 4 4 5 5 1 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 9.01673e-07 6.935946e-08 46.4285714285714 25 0 17.8571428571429 10.7142857142857 9.7240090 9.8870966 11.8025970 9.8125549 8.3905237 9.5137161 10.1328942 8.7782293 9.7293708 12.2438292 11.8064072 10.4163982 1.4324784 13.0123204 3.8474959 9.4154481 4.9135836 7.9946968 9.0086239 12.6974835 NA 14.5230081 5.2904355 10.3220194 10.8753980 3.4913529 -0.1524841 11.3540476 10.3856810 3.3710570 8.1119348 7.3788731 0.8475159 4.5199193 9.6280319 10.1654698 10.2149068 11.1495597 10.4432157 11.6181560 3.6023737 11.1526988 14.6415017 8.5397067 9.4786691 12.0949746 10.8552201 3.4913529 4.8016864 9.3483340 11.1609420 NA 10.8764341 5.0954181 5.9664328 5.4768483 10.4102114 11.5260922 10.8035052 12.8182271 12.9040451 8.4059128 10.4305749 9.5961965 11.0927476 11.4663364 5.2050445 12.1551198 10.4446134 -1.1526444 11.0720968 9.5304867 2.7553363 5.7543825 8.9229712 10.2159985 10.6863021 10.2344323 2.8474959 8.1626416 12.6287493 12.2403461 9.7737880 9.4125942 0.3894900 0.4041100 0.0488300 0.0260920 -0.0328600 -0.0146410 -0.5953600 0.0211830 -0.5941900 0.0597940 0.6421300 0.0576530 0.0485460 0.0345360 2.4837000 2.8814000 0.0549450 0.0377830 0.0000000 0.6220600 0.0716780 0.0814660 -0.5472400 0.0793030 -0.5396600 0.0803120 0.0803120 0.6995100 -0.1517000 -0.1881000 -0.0013858 0.0358060 0.0079175 -0.0351270 -0.0232920 -0.0268050 -0.5953600 0.0211830 0.0491140 0.0918800 0.0270760 -0.5941900 -0.5801600 -0.5801600 -0.5685100 -0.5603700 0.0485460 0.0485460 0.0649400 0.0546600 -0.5884300 -0.5884300 0.0549450 -0.5838200 0.0879690 0.0080567 -0.5693200 -0.5829400 0.0690950 -0.5629600 0.0910100 -0.5472400 -0.5758500 0.0913000 0.0803120 0.6671500 -0.2546700 -0.5594700 -0.5632600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.569 0.000 0.118 -0.445 0.000 0.000 -0.576 -0.576 0.000 0.000 -0.188 0.201 0.672 0.672 -0.255 -0.563 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 -0.594 0.582 -0.580 -0.580 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.569 0.000 0.118 -0.445 0.000 0.000 -0.576 -0.576 0.000 0.000 -0.188 0.201 0.672 0.672 -0.255 -0.563 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 -0.594 0.582 -0.580 -0.580 0.000 0.000 8.3353323 5.4622029 4.6023797 11.4289280 11.5860066 6.6209617 10.7785989 8.9099294 8.9898929 3.3069184 13.4237402 11.9249887 3.2398104 2.1694120 4.3710570 8.2925071 3.3710570 10.6255692 11.7737880 11.0425566 8.1649049 3.1694280 7.8161587 10.3661453 6.7483593 9.9448658 3.3710570 NA 11.3348297 5.8132758 7.4949508 9.7987768 7.2225312 11.0488441 10.6855141 4.5479310 8.9243078 0.4324250 7.6676708 11.9769361 8.4192448 7.0954192 NA 6.7116780 8.0048390 3.8918858 3.8474959 -0.1524841 4.9972382 4.6288494 2.7543745 11.2454340 0.8475159 7.4399489 9.7263093 9.1839986 3.9767760 9.3592446 13.5494482 9.0236651 4.4324517 3.4913529 11.1432610 2.1694120 NA 2.6548479 2.6548479 14.230272 6.239809 8.100158 13.012320 10.293541 10.469086 12.697484 12.051452 11.287962 11.229846 13.732378 9.579660 9.348334 8.739276 NA 7.169420 12.200639 10.759633 11.493826 7.343347 14.021363 9.374969 6.066660 9.136358 8.248372 9.278666 7.169420 7.565168 11.806407 7.810388 2.654848 10.559159 7.836177 7.130442 12.283293 9.990875 10.064844 6.976775 9.711678 12.517484 5.476848 12.178997 10.214907 10.492700 9.965784 11.925810 9.610704 9.634578 10.136935 8.664476 1.169412 8.910995 7.932300 11.160942 4.095418 10.876434 7.526972 10.480487 10.410211 7.585585 13.398058 10.433863 9.536617 12.830575 11.284464 2.654848 NA 9.974842 9.645153 9.302819 TCGA-AR-A1AQ 49 0 NA 3021 breast stage iia t2 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 6 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 8.323135e-07 2.080784e-07 20 10 3.33333333333333 50 16.6666666666667 10.0083708 8.5246792 11.6447408 8.8249982 8.7334215 8.0940450 9.3125361 10.5402762 10.1203932 11.6726299 11.4197861 10.2642730 1.0469101 12.0981300 NA 9.4306252 8.8299193 8.5427761 6.9717332 6.6835463 1.3688242 11.2986993 6.2757390 9.5938156 10.9195959 4.8282812 -0.9531597 11.0584454 10.5904362 -0.9531597 9.3253704 7.8151053 7.2168458 7.7951137 9.0025709 10.7761169 9.0469210 9.7006618 9.4763278 10.7637405 4.1762031 8.6671410 14.2101776 8.1939989 8.8829713 10.7425843 10.1469263 3.7473659 -0.9531597 8.8670999 11.0577988 1.3688242 11.0658166 4.9295638 7.7508249 7.2218471 9.0441006 11.8694919 10.2342732 11.1842324 12.9663431 6.4731862 11.5633598 11.1568986 11.3452701 11.0658166 4.4044740 11.7523374 5.7748424 0.6318959 10.5787898 10.1606632 4.1766180 5.6616299 9.9118809 10.7197883 10.7997198 9.3665932 1.0469101 9.1475835 12.6396117 13.5524225 9.7024518 9.9111072 0.4763200 0.0498310 -0.3190200 0.0592800 -0.3617800 -0.4060900 -0.3497300 -0.3368300 0.3637900 0.3391200 0.3364200 1.7035000 3.0462000 0.0084743 0.0244080 0.0000000 0.2207000 -0.3586200 0.0317180 -0.3783100 -0.3749300 -0.3589700 -0.3589700 -0.3589700 0.0859430 0.0859430 -0.3849300 0.0438650 -0.0138590 0.3692000 0.0200630 -0.3073300 -0.3606800 -0.3629000 -0.3795300 -0.3795300 -0.3497300 -0.3368300 0.0599340 -0.3825700 0.0613650 -0.0915520 0.1981700 0.1981700 -0.3688100 -0.3617000 0.0673750 -0.3892900 0.0399020 0.0244080 0.0000000 0.0000000 0.2035000 -0.3586200 -0.3586200 0.0232860 -0.3783100 -0.3786500 -0.3977300 -0.3872800 -0.3589700 -0.3589700 0.8087000 -0.3640800 0.5422400 0.0438650 0.0397610 -0.3860500 -0.3860500 1.038 -0.369 0.000 0.000 0.204 -0.143 0.000 -0.378 -0.375 -0.387 -0.387 -0.359 -0.359 0.479 0.000 -0.364 -0.364 0.000 0.000 0.000 0.000 0.000 -0.386 0.000 0.000 -0.321 -0.321 -0.362 -0.362 -0.380 -0.380 0.000 0.000 -0.383 0.000 0.364 0.364 -0.165 -0.363 0.000 0.000 1.038 -0.369 0.000 0.000 0.204 -0.143 0.000 -0.378 -0.375 -0.387 -0.387 -0.359 -0.359 0.479 0.000 -0.364 -0.364 0.000 0.000 0.000 0.000 0.000 -0.386 0.000 0.000 -0.321 -0.321 -0.362 -0.362 -0.380 -0.380 0.000 0.000 -0.383 0.000 0.364 0.364 -0.165 -0.363 0.000 0.000 7.4605493 NA 4.4044740 9.9672740 11.5916440 5.6762787 11.0238431 9.5292451 8.9679438 -0.9531597 11.8245873 11.9070187 2.3688521 NA 2.9538053 9.1156994 4.7473605 10.8530679 11.5279636 11.1200584 9.6625507 NA 9.4011705 10.7425843 8.6579458 8.4605489 3.2948413 -0.9531597 10.5719524 2.5063480 8.3956494 8.9234380 5.9417378 9.7924861 10.5792770 4.9776600 9.2709227 0.6318959 7.5626210 12.3977221 8.3711014 7.6205681 1.8542750 4.0913190 7.9417390 3.9538146 2.7473659 NA 7.6318835 1.0469101 6.4392391 11.1915793 2.6318726 9.3722265 10.2416779 9.8109633 6.5626210 10.5719524 14.3335149 9.3380916 7.0242011 4.8018105 10.4721369 1.0469101 NA 3.1343852 4.9538100 11.345574 9.523667 7.740408 12.098130 10.678603 11.094045 6.683546 7.201739 9.484673 11.393712 13.376998 11.488050 8.867100 8.083095 4.570481 7.439238 10.224341 10.630944 11.610117 4.176203 14.456410 9.487790 7.932618 8.986500 8.970249 9.218098 7.811793 6.395649 11.419786 11.115028 6.705132 9.596706 9.049736 9.171559 11.532750 10.407768 10.394542 8.107617 9.731670 7.808473 9.697973 10.202511 9.046921 10.360938 10.479463 11.492195 10.396755 11.127739 10.221847 8.982086 NA 9.658379 7.323046 11.057799 10.641712 11.065817 6.332323 11.214653 9.044101 7.373351 14.946585 11.119054 10.973958 12.115867 11.408317 6.815105 2.216858 10.480506 9.367722 8.774841 TCGA-AR-A1AR 50 1 524 NA breast stage iiia t1 n2 m0 female 2007 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino 2 3 4 4 NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 1.24847e-06 3.81477e-07 12.7659574468085 21.2765957446809 0 38.2978723404255 27.6595744680851 10.65813738 10.06565268 12.11383292 10.31777697 7.50117319 9.65990155 9.37796639 10.69129416 9.52508441 12.18516816 9.59360569 10.45949033 2.93770220 10.59198958 3.73838955 10.45314550 5.15342840 8.54860578 5.54574602 5.44293686 NA 11.69291064 8.43265213 8.48022755 10.64505917 5.26890593 -0.01654119 9.31554019 10.96667545 3.89039805 8.79246789 9.21051794 -2.01624935 3.47535731 10.20478875 11.77639561 9.79206567 11.04132623 10.39077149 11.47860917 -1.01654119 7.77140627 13.86722090 8.25573676 9.22310224 11.09170142 11.07063499 4.34105353 -0.43148140 10.18562748 11.27092752 -2.01624935 10.89227156 6.40976768 8.81560265 5.68394343 10.26224345 12.23372805 10.17610469 11.09104768 13.40198223 6.04959374 11.44472731 11.23674403 11.67175401 11.79628265 5.51488602 11.92244001 7.41604591 2.37581793 10.09887258 10.24265847 2.32550155 6.93187094 9.44395966 10.47510627 9.72749660 10.50215683 0.56842131 5.81005230 13.64422386 12.78379694 10.08153577 9.59129625 0.9604000 0.0224440 0.0147490 0.0546600 0.4517300 -0.4527600 0.0270760 -0.0031859 2.5673000 0.9334000 0.0252500 0.6066600 -0.4313800 0.0280600 0.0280600 0.0280600 -0.4311600 -0.4412400 -0.4512500 -0.5170200 -0.4194800 -0.4128900 -0.4128900 -0.4237500 0.0928950 0.0928950 0.0928950 -0.4113500 0.0520990 0.0203430 0.0172640 0.0000000 -0.4415600 -0.5353100 -0.4527600 -0.4527600 0.0270760 -0.0031859 -0.0623610 0.3230200 -0.8781300 -0.4369100 0.0199230 0.0199230 0.0199230 0.0406090 -0.8125200 -0.4232000 0.0287630 0.0280600 0.0188030 0.0188030 -0.4311600 -0.4353500 -0.4250600 -0.4427500 0.0099382 0.0153080 -0.4194800 -0.4812300 -0.4128900 -0.4128900 0.0876790 0.0049969 0.0928950 -0.4122300 0.0056526 -0.3973000 -0.4040700 0.000 0.000 0.000 0.000 -0.419 -0.419 -0.451 0.000 -0.419 -0.403 -0.403 -0.413 -0.413 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 -0.411 0.528 -0.404 0.000 0.000 0.000 0.000 -0.434 0.000 -0.373 -0.373 0.000 0.000 0.313 0.313 -0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 -0.419 -0.451 0.000 -0.419 -0.403 -0.403 -0.413 -0.413 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 -0.411 0.528 -0.404 0.000 0.000 0.000 0.000 -0.434 0.000 -0.373 -0.373 0.000 0.000 0.313 0.313 -0.437 0.000 0.000 0.000 0.000 0.000 7.44088494 NA 5.00587153 9.02789771 10.41526241 5.15342840 10.13673907 9.59768890 7.57717501 0.56842131 12.46719352 10.92906093 1.15341624 1.79085543 3.30543069 9.32557845 4.45923487 10.73127711 11.75839367 11.38851213 9.03607166 -0.01654119 8.73922570 9.51390994 7.49920331 7.59821333 0.30544528 NA 11.00743128 1.56846996 8.58713017 8.90608817 4.15343246 8.26846668 11.16682890 4.13325115 9.07493914 4.89039319 8.93770014 12.66529112 7.41813175 6.52266313 -0.43148140 1.89040778 8.33554712 3.50707153 2.50705884 NA 6.89639296 3.60614608 3.62736170 10.27236980 NA 7.87983624 10.88832644 9.75127441 4.86614638 10.10212033 13.12573042 9.78763472 5.01692860 4.23143241 11.09202814 -2.01624935 NA -2.01624935 3.93770220 13.582283 8.718213 9.310495 10.591990 9.964636 10.188380 5.442937 8.215925 9.712275 10.787231 14.512339 11.998657 10.185627 7.518779 -1.016541 7.153428 10.982094 11.5066980 11.2959612 2.6839434 13.9105402 9.5270189 8.1978226 8.5236317 9.6934491 9.9479672 6.7316965 5.9607827 9.5936057 9.7169427 3.0278972 11.8395401 5.2026724 8.8217226 12.3127394 10.9847359 10.7448471 8.6300625 7.2941162 10.6142258 7.2712165 10.9908533 9.7920657 10.5540710 9.8764259 11.9976113 10.7356752 11.8793629 11.4857139 10.0411570 -1.0165412 9.2733669 7.7073695 11.2709275 6.0003110 10.8922716 8.2444233 11.5034384 10.2622435 8.3177771 14.6615120 10.8282094 11.3232145 12.5814980 10.7638384 5.6977488 0.3054453 11.1902128 11.2635494 10.6021186 TCGA-AR-A1AS 54 0 NA 1150 breast stage iib t2 n1 m0 female 2007 NA yes infiltrating ductal carcinoma 1 asian NA 1 1 2 1 2 2 4 1 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 4 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 4 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.01673e-07 3.467973e-07 22.2222222222222 36.1111111111111 0 25 16.6666666666667 9.7743451 9.3356257 11.6856300 8.9027164 8.5247478 8.9094866 10.0606789 10.0533617 9.6673727 14.2900165 10.4772361 10.9094865 -0.1512018 12.7212731 1.8487982 9.1202537 5.8260705 7.7129768 9.1639402 13.0281555 0.8487982 13.5654493 2.8487982 9.2486027 11.5383519 8.3703910 -0.1512018 8.3061715 10.6309698 -1.1513620 7.3000020 7.8232054 NA 3.3082152 9.6927117 10.9783956 9.5750088 13.3061715 9.7541777 10.7613057 7.0237167 12.2614928 14.4140415 7.8638988 9.1718453 10.4365681 10.8145749 4.7314331 1.4337607 8.8835897 11.0612870 NA 10.7876350 2.4337607 4.0967173 4.7556834 10.1185017 11.8806641 10.4912936 12.2284397 12.8223983 8.4524171 11.0597663 10.3184324 10.7920380 11.0551945 4.4033768 12.8487906 10.3255369 1.8487982 10.2994863 8.8102403 2.0187054 5.3082225 10.9135334 10.7743450 10.1964119 8.8794577 0.8487982 10.9050896 13.6624716 11.9661090 10.2581816 9.2411080 1.35170000 1.38040000 0.59386000 0.57773000 -0.02767100 0.01894300 0.02146300 0.02146300 -0.71737000 0.05893700 0.04996600 -0.05394300 -0.04874800 -0.05239600 -0.05239600 -0.05239600 0.00291330 0.00291330 0.01241900 0.00000000 -0.04482200 -0.72367000 0.02020300 0.02020300 -0.05345200 -0.05345200 -0.05345200 0.06923900 0.00055459 -0.02035900 -0.12108000 0.59386000 -0.02767100 -0.02767100 0.01894300 0.01894300 0.02146300 0.02146300 0.02146300 -0.08320000 -0.06759200 -0.71737000 -0.02671400 -0.02671400 -0.02671400 -0.02671400 -0.04874800 -0.04373700 -0.05239600 -0.05239600 -0.05239600 -0.05239600 0.00291330 0.00291330 0.00291330 0.01241900 0.00000000 0.00000000 -0.04482200 0.01754400 -0.72367000 0.02020300 -0.03544800 -0.02479800 -0.05345200 0.06923900 0.02454800 -0.00332430 0.00263570 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.977 0.000 -0.724 0.000 0.000 0.000 0.000 0.000 0.000 1.358 0.000 0.000 0.000 0.000 -0.121 -0.121 0.578 0.578 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.717 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.977 0.000 -0.724 0.000 0.000 0.000 0.000 0.000 0.000 1.358 0.000 0.000 0.000 0.000 -0.121 -0.121 0.578 0.578 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.717 0.000 0.000 0.000 0.000 0.000 8.6911408 9.0739980 6.1434118 10.4726721 11.9664337 7.0588771 12.2994864 7.6463873 8.4931337 NA 11.4153204 11.3311146 1.1706942 2.0187054 2.3082152 6.9832171 3.0967173 7.5595974 11.3637512 11.2881021 9.8388946 6.5969828 7.8516054 10.7052161 5.4926480 2.5492256 7.5141262 -1.1513620 11.2060677 4.5212141 5.6301492 7.4744993 5.5212172 10.5281915 10.6186284 2.3082152 9.0594618 NA 6.5492302 13.1520006 7.3366306 6.5698905 NA -0.1512018 8.7942345 5.1525728 3.7556781 -0.1512018 -0.1512018 4.3406406 0.4337073 11.0080313 NA 5.7314331 10.7195406 9.7817435 1.6561302 9.2613604 10.8163771 8.0582440 2.6561531 3.2411080 11.1511439 2.5492256 NA 5.3565840 0.4337073 12.698854 6.348636 8.751166 12.721273 10.316906 11.578199 13.028155 12.387101 9.374311 10.642800 13.294969 10.434223 8.883590 9.262419 1.848798 7.124915 10.834633 11.1659205 12.0379974 8.0824104 14.7774686 9.1341927 2.8487982 8.8945504 9.1875270 9.7146321 6.1616741 8.5492302 10.4772361 5.4781467 -0.1512018 9.9448469 9.2205672 7.6610320 9.2886216 10.0594620 10.9599262 8.8403125 8.0967183 11.5205528 1.8487982 10.6455765 9.5750088 10.1479986 10.0836080 10.9780736 9.6879944 10.8303579 10.5348534 8.9256061 NA 9.5300641 6.1249154 11.0612870 1.6561302 10.7876350 6.6103413 10.4081677 10.1185017 7.4598152 14.2108029 10.5608876 10.5414061 13.2017306 10.5969835 NA 0.4337073 10.5418419 10.4314031 9.4653395 TCGA-AR-A1AT 62 1 1272 NA breast stage iia t2 n0 m0 female 2007 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino 3 2 NA 2 6 1 2 2 5 6 4 1 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.427581e-07 26.0869565217391 4.34782608695652 4.34782608695652 39.1304347826087 26.0869565217391 10.68559620 9.32827123 11.27855905 9.08005295 8.52382224 9.08556992 10.33117694 9.48781713 10.63051951 8.97398774 10.92828008 10.21642528 0.63710012 17.58485282 3.37407963 9.86352161 5.09654018 8.29532079 9.68967743 12.92039067 1.63710012 13.14060386 6.73864761 9.35954116 10.79445632 4.00634291 NA 11.14663696 9.89135068 2.95902822 8.43152518 8.33291779 NA 5.54400000 9.78091766 10.45515890 8.80536372 10.81245097 10.17173650 11.26798318 3.57571168 9.90233366 14.34313764 7.48831737 10.94620668 10.86111103 11.13662309 4.63711172 0.63710012 8.81701849 12.76767991 1.05213762 11.14919133 5.42718711 7.04649979 5.33755055 10.64553802 11.68559624 9.94393055 12.00106155 12.77367332 8.28096559 10.86392289 10.03696399 10.92828008 10.44446426 4.69600494 12.48651445 9.28696429 0.05213762 10.09449024 8.89606776 3.12424541 7.08005322 10.69960525 10.02225281 10.54199478 9.45089059 2.05213762 11.35364303 13.57852383 12.68945098 10.26038116 9.26038116 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.91012762 6.93479011 5.46153838 10.54400000 12.62295130 6.63214168 12.01341567 10.00292877 8.08300695 -0.94786238 11.54500147 11.66265267 2.75257734 NA 2.51156924 7.78685639 4.22207036 10.58255318 11.63593483 11.51898807 9.15412241 NA 7.49509072 9.45409300 8.08005268 3.13961683 NA NA 10.92328202 6.26160039 6.75950608 8.12360930 10.79361388 10.46149541 10.81535920 3.75258805 9.35934766 NA 7.94089027 13.27931151 6.42718711 8.22707245 NA -0.94786238 7.87551408 0.63710012 3.51158189 NA 6.85304626 6.01989091 4.26159851 11.43854830 -0.94786238 6.62200202 10.44231581 9.95527560 5.31893501 10.19425392 13.94535357 10.10131469 5.71035737 4.60673832 10.42989962 4.05214632 0.05213762 0.05213762 1.85949255 12.609759 7.160671 7.900770 17.584853 10.411896 10.311302 12.920391 11.222385 9.160031 10.728545 13.385093 10.940510 8.817018 6.659477 2.752577 7.237023 11.545001 11.3326277 12.3218580 6.0965402 14.0327769 8.8384164 6.8723252 8.7800673 9.2132787 10.0111779 7.8036907 5.9347901 10.9282801 6.2220723 1.3740657 10.2220718 9.4636578 7.8972919 13.6072153 10.4304417 10.8408652 8.1101387 8.7543197 11.0023382 7.0179308 10.1461651 8.8053637 10.2432061 10.3444685 10.9858375 10.2075976 10.5776677 10.5761988 9.2542707 1.3740657 10.2190505 6.4271871 12.7676799 7.8003395 11.1491913 7.4657745 10.7619759 10.6455380 7.7103581 14.0659929 9.4699993 10.2082300 13.1963271 11.2649472 5.7386463 0.6371001 10.3410129 10.4008751 9.4041902 TCGA-AR-A1AU 39 0 NA 2868 breast stage iiia t2 n2 m0 female 2007 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino 2 2 3 5 4 3 1 4 4 9 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.387189e-07 29.4117647058824 23.5294117647059 0 17.6470588235294 29.4117647058824 10.5126724 10.4229542 12.1493587 9.9573283 7.8850807 8.8240795 10.2804577 10.0276916 10.1110784 14.1363593 11.8569534 10.9534994 -1.4096615 12.7852166 3.5446585 9.5432010 7.0903051 8.3453471 8.8595863 12.3788722 4.8192799 13.4116856 4.9998512 8.4343809 11.3887290 8.3848757 NA 10.7901658 8.7055035 2.3978030 8.6142140 7.7678792 0.1754288 4.0498921 10.0893089 10.3836566 9.2716981 11.2672983 9.8460785 11.6319478 10.2257244 10.8534354 15.4341477 8.9372505 10.0035587 11.4449386 10.8072056 4.4731050 6.0982553 9.3158259 11.8303565 NA 11.2806760 5.2628841 5.1903739 5.1603152 10.0570461 12.3331902 10.4623649 12.2892729 12.9950026 8.7852167 10.9646842 10.5262104 11.5468359 11.5761238 5.6672762 12.0811852 13.0731416 NA 10.5798543 9.2611159 3.9123912 5.2051696 10.2562397 10.4134288 10.4719561 9.6135210 4.6565479 8.5167559 12.8569535 12.2405017 10.4122337 9.3192307 0.00652620 -0.01422800 -0.00322800 -0.00526100 0.00130570 -0.02118500 0.49476000 0.49286000 0.44748000 0.44748000 0.89788000 0.00000000 0.00124810 0.44952000 0.46947000 1.34660000 0.00235810 0.00235810 -0.00235530 0.00513590 0.00513590 -0.48197000 0.00781470 0.00638710 -0.00443120 -0.00443120 -0.00443120 0.44867000 0.00374650 -0.46014000 0.00110930 -0.00322800 -0.00166290 0.00110930 -0.47659000 0.00069327 -0.49569000 0.00110930 -0.50245000 0.00541390 -0.00429290 -0.01024000 -0.00304750 -0.00304750 -0.00304750 -0.00055444 0.00124810 0.00124810 0.44952000 0.46947000 -0.47797000 -0.47797000 0.00235810 0.00235810 0.00235810 -0.00235530 -0.47649000 -0.47649000 0.00513590 -0.00166780 -0.48197000 0.00781470 -0.00152430 -0.00443120 -0.00443120 -0.50017000 -0.93489000 0.00388540 0.00388540 0.000 0.000 -0.016 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 -0.460 0.000 0.000 0.000 0.440 0.000 0.000 0.000 0.000 0.000 0.000 -0.016 -0.466 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 -0.460 0.000 0.000 0.000 0.440 0.000 0.000 0.000 0.000 7.9123876 NA 5.6884909 10.7242441 11.8482895 6.3842899 11.0408978 9.6947505 8.6565353 4.0498921 12.2925242 10.9662350 2.8383871 3.4973441 4.6128302 7.7999130 3.7197420 8.9827772 10.9044764 10.5616439 9.4692769 2.7603913 7.9391878 10.7074534 6.1829167 8.5078319 0.1754288 -0.4094698 10.7158732 7.2593450 7.2307045 8.3012662 7.8312509 10.5564820 9.9573283 2.3978030 8.6619220 2.0498747 7.9589662 12.9344088 8.2978187 7.1641064 NA 3.5904583 7.7528509 4.3453467 3.5446585 0.5904344 3.5446585 5.9245085 3.5446585 10.4635193 2.1754288 9.3012662 10.4619800 9.8168720 4.1450497 8.8204802 12.0645459 8.3166780 3.6348488 3.1140171 11.9084375 1.5904823 NA 3.4973441 3.4484385 13.515133 5.219815 8.488305 12.785217 10.122328 10.466977 12.378872 12.382538 10.207808 10.955415 13.421866 12.691779 9.315826 7.074275 NA 6.939188 11.719904 11.5147155 11.7647613 6.6457420 13.1772977 8.7197427 5.4233496 8.5648743 8.6858568 10.3437809 6.1829167 7.3783625 11.8569534 6.0083121 3.5446585 10.3449297 6.9123876 8.0762892 12.6516621 9.9843864 10.0365091 9.2522378 9.4631346 11.4905718 5.4106396 13.5545704 9.2716981 9.7913583 10.3222030 10.3243224 9.9061754 9.9258501 10.6746037 9.1286486 2.9123816 8.8395257 7.5549740 11.8303565 6.8096280 11.2806760 6.7197434 11.0980066 10.0570461 7.0250875 13.4610652 10.2795841 9.6280067 12.7178092 10.8195789 2.1754288 0.9124199 9.8993675 9.8948111 9.5627215 TCGA-AR-A1AV 68 0 NA 1864 breast stage iib t2 n1 m0 male 2007 NA yes infiltrating ductal carcinoma 1 white hispanic or latino 3 2 1 2 2 2 4 1 5 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 1.733986e-07 35.2941176470588 23.5294117647059 2.94117647058824 11.7647058823529 26.4705882352941 10.5937163 10.7391986 12.1274774 10.3195163 8.3521189 9.0492158 10.6707240 10.6960929 8.8903716 14.4978507 11.7098580 11.2598606 0.5319678 13.2083821 3.8824376 9.0117204 5.1872927 8.1525267 10.6648254 13.4054489 1.9104641 13.3056975 NA 9.3321930 10.7108539 5.7018651 NA 11.1014161 11.4913626 3.1642070 6.2489314 6.9815011 -0.7901100 4.3597601 9.7242330 11.0393384 10.7945049 10.9111019 10.6550269 12.1181232 -1.7898605 12.1073849 14.5762831 10.0727618 9.3113246 12.1467420 11.7246029 3.9913722 5.5937153 9.4703437 11.2739127 -0.7901100 10.8113186 5.1048315 5.3597601 4.8682225 10.6681623 12.0444831 11.1422268 12.0939918 13.1354274 8.2198408 10.3139555 10.1506450 11.2114203 11.3891437 5.5937153 11.5742835 10.2170393 -0.2050643 9.9186649 9.0857614 3.1688506 5.1407500 10.9415432 10.7850785 10.7569065 9.9004466 1.6694350 8.6278647 12.0293929 10.9542152 10.1897945 9.1429650 1.2796000 1.2796000 -0.0354480 -0.0354480 0.0000000 0.3678900 0.3461600 0.3461600 -0.0094046 -0.0094046 -0.0094046 -0.0284910 -0.0284910 -0.0114730 3.1177000 -0.4299600 -0.0457700 0.6605000 0.0102740 -0.0310860 0.3375200 0.1971000 0.1971000 0.1971000 0.2451300 0.2451300 0.2451300 0.3254300 -0.0586640 -0.0273980 -0.0099565 -0.0354480 0.0000000 0.0000000 0.5327400 0.5327400 0.3461600 0.3461600 0.3461600 0.3395900 0.3460000 -0.0094046 -0.0271240 -0.0271240 -0.0271240 -0.0271240 -0.0284910 -0.0284910 -0.0114730 -0.4603500 -0.4299600 -0.4299600 -0.0457700 0.6584800 0.6584800 0.3412800 -0.0310860 -0.0310860 0.3772600 0.3399900 0.1971000 0.1971000 -0.3919600 0.2451300 0.2451300 0.3254300 0.3408000 -0.4448000 -0.4529100 0.000 0.000 0.000 -0.418 0.661 0.661 0.000 0.000 0.338 0.978 0.978 0.197 0.197 -0.386 -0.386 0.245 0.245 0.000 1.280 0.325 0.325 0.341 -0.445 0.000 0.000 0.000 0.000 0.000 0.000 0.533 0.533 0.346 0.346 0.340 0.340 0.000 0.000 0.000 0.000 0.140 0.140 0.000 0.000 0.000 -0.418 0.661 0.661 0.000 0.000 0.338 0.978 0.978 0.197 0.197 -0.386 -0.386 0.245 0.245 0.000 1.280 0.325 0.325 0.341 -0.445 0.000 0.000 0.000 0.000 0.000 0.000 0.533 0.533 0.346 0.346 0.340 0.340 0.000 0.000 0.000 0.000 0.140 0.140 7.9930103 -0.2050643 5.0044295 10.0036153 11.6528260 6.1185840 11.9067623 8.3101356 8.4867763 -0.2050643 11.3827521 11.3027444 6.3998359 2.8538759 3.2974702 8.1258913 3.2100147 9.3159205 11.8172268 11.1820944 9.1721852 6.4626773 8.2296028 10.2851569 6.3998359 4.7491695 5.3799363 -1.7898605 10.8835420 5.5850527 7.2323797 8.5375648 5.0926557 9.8112814 10.7091105 3.1642070 8.7665180 NA 7.6151536 11.5310946 8.7693893 7.2461857 -1.7898605 1.0173518 8.7626810 NA 3.2974702 -1.7898605 2.1168970 5.2154107 -0.2050643 10.5958744 -0.2050643 7.3237547 10.8391409 10.2828146 3.8824376 8.8024692 11.7735659 7.8338939 2.6023381 2.3799259 11.1108789 3.6023262 NA -0.7901100 -1.7898605 14.579923 5.419465 8.626810 13.208382 10.365779 11.352917 13.405449 13.084321 8.994647 11.726943 13.336878 10.079220 9.470344 9.094182 1.379954 7.023793 12.029792 11.0691586 11.8349217 7.5409293 13.4386046 8.8744595 3.4579357 8.9607190 9.5426080 10.4324809 6.0987543 10.1127640 11.7098580 6.7607585 -1.7898605 11.6716194 4.8824376 8.2317833 12.0840328 9.4460262 11.1623893 8.6172797 7.7569065 11.9361238 2.2974849 11.2414703 10.7945049 10.1685648 9.0492158 11.1885438 9.7940350 10.6092900 10.9991381 9.4685780 -0.2050643 9.2358230 8.3773298 11.2739127 1.6694350 10.8113186 8.2720582 10.4642908 10.6681623 7.4603101 13.0898346 10.2149348 9.4994547 13.2515429 10.5506967 -1.7898605 NA 10.6539916 10.8357209 9.3126438 TCGA-AR-A1AW 65 0 NA 2632 breast stage iia t2 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 4 3 5 3 7 4 5 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.201959e-07 1.040392e-07 22.2222222222222 11.1111111111111 5.55555555555556 33.3333333333333 27.7777777777778 10.968783 10.097670 11.964692 10.192615 8.495669 9.949315 8.858743 10.345177 8.995498 12.179730 10.611146 10.882359 4.270252 12.335599 3.455807 8.663913 6.575104 9.796882 8.730966 12.253131 NA 12.859992 4.430713 9.805747 10.821222 4.845751 -1.402016 11.398521 9.119424 2.057242 8.883226 6.690581 -1.402016 7.757695 10.164829 10.063900 9.979907 10.764928 10.419199 11.846492 1.597841 10.998703 14.688122 7.996011 8.980448 12.178200 11.579748 5.480465 4.528559 9.840998 11.389393 NA 10.927900 6.398723 9.305183 5.777733 10.449182 11.976389 10.306476 11.348740 13.226383 7.427547 10.704387 10.294074 11.389597 11.403164 4.919750 12.145200 10.928460 NA 10.103139 10.149532 4.728345 8.005091 11.384297 10.337604 10.276864 11.121386 8.071529 7.280818 12.583843 12.766496 10.102643 9.079623 0.37545000 0.37545000 -0.00041585 -0.00041585 0.04499900 -0.01876500 0.06446200 0.06293700 -0.18949000 -0.18949000 0.94078000 0.19375000 0.19375000 -0.19325000 -0.14644000 -0.14644000 -0.05091100 -0.05091100 0.12859000 0.14804000 -0.19089000 0.17272000 0.17272000 0.17272000 0.49147000 0.16460000 0.16460000 0.12992000 -0.12356000 -0.12356000 0.00000000 -0.00041585 0.04499900 0.04499900 -0.01876500 -0.01876500 0.06446200 0.06293700 0.06622900 0.07067300 0.16355000 -0.19525000 -0.10592000 -0.10592000 -0.10592000 -0.10592000 0.19375000 0.19375000 -0.19325000 -0.14644000 -0.14644000 0.60666000 -0.05091100 -0.05091100 -0.05091100 -0.23408000 -0.09604400 -0.10985000 -0.18496000 -0.19960000 0.17272000 0.17272000 0.44562000 -0.20523000 0.16460000 1.53990000 -0.31949000 -0.07107100 -0.07107100 0.194 0.194 -0.193 -0.193 0.000 0.000 -0.234 0.000 -0.185 0.000 0.000 0.173 0.173 -0.191 -0.191 0.491 0.165 -0.124 0.252 0.130 0.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.195 0.941 -0.106 -0.106 0.000 0.000 0.194 0.194 -0.193 -0.193 0.000 0.000 -0.234 0.000 -0.185 0.000 0.000 0.173 0.173 -0.191 -0.191 0.491 0.165 -0.124 0.252 0.130 0.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.195 0.941 -0.106 -0.106 0.000 0.000 7.3560469 NA 5.2271789 10.2074640 10.8698701 6.7963174 10.1851323 10.6912411 8.7943519 0.9197596 12.1465251 11.6535568 3.2982624 1.7677395 3.8832298 9.3726107 5.1676791 12.0383035 11.3695194 10.5682891 8.9630524 4.7271091 8.4180027 10.2755433 10.0251364 5.0896761 0.1828194 -1.4020160 11.1058659 6.9016043 6.9242531 8.3660078 9.4743405 10.3503046 11.1650667 5.6201905 8.8751110 -1.4020160 7.7752429 12.2651569 8.7826988 5.8457510 NA 7.4051789 8.5664902 5.5166865 3.9197500 -1.4020160 9.6793070 5.0598744 5.9901403 10.4342684 1.5978410 7.5432677 10.3069073 9.8504889 8.1790243 11.8752563 15.2601025 9.8445642 9.3308389 6.0816400 9.8169921 0.1828194 NA 0.1828194 0.9197596 10.905175 6.603448 8.781459 12.335599 10.282572 10.327869 12.253131 11.189112 9.241680 11.443706 13.617154 11.764301 9.840998 8.393863 1.767740 8.073557 10.869870 10.993893 11.090928 6.392240 12.377848 8.769000 9.334225 9.376722 9.132126 10.346591 10.028276 8.254248 10.611146 5.007213 3.405176 10.940732 8.280818 8.409134 10.223989 11.437815 10.363524 7.486567 7.462010 12.510339 10.819411 11.718667 9.979907 10.633654 10.023564 11.121631 10.049550 10.951797 10.735455 8.592177 4.325746 9.853094 9.279396 11.389393 11.730323 10.927900 6.227181 11.202015 10.449182 8.055204 13.428251 10.067465 10.564689 13.111551 10.804228 9.640167 5.823464 10.523749 10.202840 9.965784 TCGA-AR-A1AX 64 0 NA 2629 breast stage i t1 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 3 3 5 3 7 4 4 9 NA NA 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 6.935946e-08 25 16.6666666666667 0 16.6666666666667 41.6666666666667 10.842582 10.187787 11.912872 10.261624 7.967420 9.810444 10.231543 9.753447 10.202212 12.549201 10.687837 10.574012 1.918653 14.975738 4.088583 8.857652 7.258510 8.870528 7.503623 12.230863 3.181691 13.151261 7.080548 9.094584 11.166113 6.539247 -0.403351 9.614932 10.877793 4.378095 8.697395 7.279727 -1.403160 5.269157 10.791797 10.307539 9.372343 11.880544 9.921475 11.839013 7.006123 9.774775 15.045671 8.182896 9.900502 11.470753 11.088335 5.166587 1.404086 9.354122 11.980976 -0.403351 10.915840 6.269158 8.141697 4.882134 10.666853 11.595499 10.037601 12.281262 12.940404 6.591085 10.838120 10.490785 11.309904 11.581685 5.416911 13.165282 11.315265 -0.403351 10.083065 9.962508 3.994190 6.877503 10.669200 10.196180 10.467097 10.880399 10.270041 9.677550 13.026139 12.565039 10.028230 9.075502 0.08744200 0.08744200 -0.00133580 -0.00133580 -0.00230530 -0.00188980 -0.00175130 -0.00175130 -0.17115000 0.71259000 0.76952000 0.00102070 -0.00161280 -0.00046547 0.01479900 0.01479900 0.00282470 0.00282470 -0.06450600 -0.19270000 0.19974000 -0.12468000 1.30660000 0.03924600 0.19335000 0.19335000 0.19335000 0.00074336 0.08744200 0.08744200 0.00000000 -0.00133580 -0.00230530 -0.00230530 -0.00188980 -0.00188980 -0.00175130 -0.00175130 -0.00175130 -0.00050438 -0.00098246 -0.17115000 -0.01047200 -0.01047200 -0.01047200 0.00476920 0.00476920 0.00338000 -0.00046547 0.01479900 0.01479900 0.01479900 0.00282470 0.00282470 0.00282470 0.00102070 -0.19270000 -0.19270000 0.19974000 -0.19510000 -0.12468000 0.03924600 0.00741110 -0.17292000 0.19335000 0.00074336 0.14197000 0.00796780 0.00796780 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.193 0.200 0.225 0.039 -0.125 0.000 0.000 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.002 0.713 0.000 0.000 0.258 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.193 0.200 0.225 0.039 -0.125 0.000 0.000 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.002 0.713 0.000 0.000 0.258 0.000 8.6424918 0.1816751 4.3246522 10.0098313 11.2480082 6.6099706 11.3795258 10.5001962 8.7308376 4.9890482 11.6389046 10.7421709 2.5036286 -1.4031602 3.9890482 7.9782752 4.1816910 11.8130234 11.3733709 10.5939118 8.9520834 8.0985696 7.6868444 9.9917307 9.2215277 6.1589752 0.9186915 NA 11.0190599 7.1779327 7.7078678 8.7143754 6.1589752 10.0714117 10.8942218 5.5854163 9.1722715 1.5967444 7.8705281 12.4381001 8.5318972 7.0561641 -1.4031602 4.8821343 8.2902193 4.6628207 4.0885826 -0.4033510 8.4686375 6.3834589 5.5155958 10.4300177 NA 8.8243481 10.2792880 9.6560768 7.0061230 11.0868311 14.2195563 8.7778845 6.1966444 5.6301550 10.2814809 0.1816751 NA -0.4033510 0.1816751 11.913523 6.619100 8.479375 14.975738 10.182634 10.457431 12.230863 11.871110 9.195399 11.231770 13.123170 11.288476 9.354122 8.247784 1.918653 7.442222 10.729553 11.312480 11.389726 6.652015 13.342247 8.652015 8.901654 8.860002 8.445355 10.491683 9.397632 7.761639 10.687837 7.018797 1.918653 10.657090 5.980437 8.057168 12.114402 11.068915 9.861761 7.969597 8.871693 12.218097 9.008243 11.929169 9.372343 10.294134 9.812872 11.193854 10.579013 10.427247 10.830951 9.728589 8.755342 10.071371 8.432751 11.980976 9.479375 10.915840 6.766657 10.773834 10.666853 7.769235 13.488990 10.107002 10.537780 12.687176 10.166588 8.453158 3.454715 10.684195 10.095582 9.756604 TCGA-AR-A1AY 65 0 NA 1026 breast stage i t1 n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 4 3 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.144431e-06 3.467973e-07 18.1818181818182 27.2727272727273 6.81818181818182 34.0909090909091 13.6363636363636 10.5792198 9.6567845 12.4997199 9.5009092 8.0412950 8.1460523 8.6402739 10.1761435 11.4999945 13.2104370 10.3688458 10.3149376 0.8774302 11.6716469 2.7253922 10.4250592 6.9520703 8.3531270 8.5023716 5.4979795 NA 9.7854858 7.5778336 8.9743721 11.3480524 4.6847458 2.7253922 7.7697843 11.3700479 2.8033924 9.8586754 7.4653582 -0.4445765 3.7253922 9.4540669 10.8500862 9.0573027 10.7791656 9.7926755 11.8629509 0.5554235 8.3915160 15.8925821 9.5437596 9.4009554 11.1404280 10.5437951 4.0148998 -1.4445765 9.7483747 12.0940182 -1.4445765 8.4817615 4.5096642 7.0433051 6.4134468 7.8269285 12.1579324 10.7288303 12.5582805 12.5460126 5.0632613 11.3337480 10.9563876 10.7794671 11.3810206 5.8033924 12.2083104 10.3780363 3.3628205 10.3178475 10.5754036 4.1479253 4.0148998 8.4935749 10.9168610 10.8572474 10.3748463 2.6429326 6.0790282 12.4545391 12.2383503 10.1655675 9.8187346 1.1777000 0.4571700 0.0563700 0.0065262 -0.6726000 0.4463000 0.6753000 1.3957000 0.0079175 0.6326200 1.6225000 1.1303000 -0.6859700 0.0211830 0.0132130 0.0132130 0.0081959 0.0000000 0.0495370 -0.6898800 -0.0160170 -0.7063900 -0.6682700 -0.3931900 -0.0450930 -0.0450930 -0.0496950 0.6382800 -0.7090800 0.0235660 -0.6753900 0.0210430 -0.0058140 -0.6726000 -0.6772900 -0.6772900 0.0081959 0.0141900 -0.1837000 0.0217780 0.0076392 0.6257000 0.6605000 -0.0069195 -0.6810400 -0.6810400 -1.0021000 -0.7507200 0.0246890 0.0020805 0.0132130 0.0132130 0.0000000 0.0000000 0.0000000 -0.6551900 -0.6898800 -0.6898800 -0.6871500 0.0114000 -0.7063900 -0.6682700 -0.0055375 -0.0450930 -0.0450930 -0.7130100 0.0391950 -0.1916600 -0.1575800 1.099 -0.695 0.000 0.000 0.000 0.000 -0.655 -0.690 -0.687 0.000 0.000 -0.706 -0.706 0.000 0.000 0.000 0.000 0.000 1.176 0.000 0.000 0.000 -0.158 0.000 -0.652 0.000 0.000 -0.673 -0.673 0.413 -0.677 0.000 0.000 0.000 0.000 0.633 0.633 0.634 -0.041 -0.194 -0.194 1.099 -0.695 0.000 0.000 0.000 0.000 -0.655 -0.690 -0.687 0.000 0.000 -0.706 -0.706 0.000 0.000 0.000 0.000 0.000 1.176 0.000 0.000 0.000 -0.158 0.000 -0.652 0.000 0.000 -0.673 -0.673 0.413 -0.677 0.000 0.000 0.000 0.000 0.633 0.633 0.634 -0.041 -0.194 -0.194 7.2901746 NA 3.5554603 10.2506937 11.6170054 5.5925168 11.2550379 9.1345834 7.5024301 1.1404515 10.1623333 11.4007418 1.3628345 NA 4.0148998 9.8362363 2.7253922 8.7428174 11.7629374 11.5473415 9.4750737 3.0790196 8.4638582 9.5875111 5.0311967 6.1023600 NA 2.3628065 10.8773935 3.3628205 7.3170164 9.2994583 6.9041938 10.2515332 11.8100512 1.1404515 9.9859181 3.8408660 6.6795871 12.3316928 7.4196518 6.3820135 NA 5.8500868 8.4623558 5.9041926 -0.4445765 NA 3.0148908 2.9505244 7.0066762 11.5928408 8.0311989 10.1975171 11.0128463 10.8852617 4.4134451 10.1683339 11.5693115 7.5154673 3.8033924 2.0148908 10.4873110 2.4623665 5.4979795 5.4623567 6.5998593 12.160179 9.425830 7.561090 11.671647 10.329429 11.670346 5.497980 10.236264 9.484724 11.338054 12.890926 11.655635 9.748375 7.010792 5.388355 7.626927 11.987746 11.0197559 11.4182965 7.1701754 14.1337491 8.8408676 5.5888885 9.8033930 9.5001774 9.6977002 4.6215537 6.9942573 10.3688458 9.6918157 5.8683485 10.4773064 8.8187346 9.9679082 12.7901332 10.9378193 10.0296784 7.6613741 8.4773066 9.8975401 3.7253922 10.8311710 9.0573027 9.4795356 10.3335426 12.1318317 10.1328942 10.2550379 10.4713448 10.2437157 NA 10.1720235 6.9859182 12.0940182 4.1100542 8.4817615 8.0711652 9.9124675 7.8269285 7.8081308 13.5502750 9.7228835 10.1811743 12.5505259 12.3781358 -0.4445765 NA 10.3232361 9.6296069 8.8269285 TCGA-AR-A24H 65 0 NA 4894 breast stage iia t2 n0 m0 female 2001 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 4 2 NA NA 1 2 1 6 1 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-06 7.976338e-07 10.5263157894737 27.1929824561404 4.3859649122807 30.7017543859649 27.1929824561404 10.5927657 10.0415173 8.3255838 8.5451259 9.8979005 8.6627503 10.5349524 10.2180634 8.9115954 12.2469511 12.0745917 10.7784190 4.1482996 13.4859176 5.4317500 8.9630888 4.9337898 8.9268916 9.4900193 13.3242063 0.9003355 13.8041794 1.4853238 9.0713698 11.5125455 5.9171763 -2.0997418 8.3253846 9.6291389 2.1482834 8.0244892 5.9664582 2.9878302 3.1482996 10.3656794 10.6888826 9.5338176 10.7415394 10.4874424 11.6935650 12.9157396 10.8945448 13.3107201 8.3316985 10.9821844 12.1469603 12.1855536 2.2926934 0.9003355 9.5347254 9.9881625 NA 11.0113408 5.6008079 6.4356436 5.8251801 8.6060006 11.6856163 10.1924022 10.9889908 13.3749930 7.6435193 11.2568201 10.9622186 10.7661014 10.8063192 4.6552545 12.1732166 8.9261999 -2.0997418 9.0702933 9.7948070 3.7092686 6.0399192 7.5990730 10.7181513 10.8842524 10.1822981 1.9878302 6.7799517 12.4442458 11.0070946 9.6085899 9.0062767 0.154120 -0.367250 -0.268410 0.159650 0.156270 0.147410 0.184950 0.453260 0.122990 0.122990 1.671300 0.598210 -0.217010 -0.298390 -0.298390 -0.298390 0.452430 0.066802 1.060100 -0.260550 -0.098682 0.125640 0.763700 0.763700 -0.655660 -0.228220 -0.228220 0.544880 -0.676090 0.044506 -0.237410 -0.633010 0.305210 -0.942180 0.000000 0.000000 -0.691880 0.093766 0.582560 0.404110 -0.688970 -0.724230 0.100160 0.799610 0.072270 -0.215520 -0.217010 -0.681310 -0.689520 -0.298390 -0.692060 -0.692060 0.452430 1.403000 0.691820 -0.065447 -0.241800 -0.256730 -0.399190 -0.694140 -0.677930 0.763700 -0.284650 -0.219480 -0.228220 0.166550 0.060965 -0.674170 -0.690970 0.409 0.192 -0.344 -0.692 0.386 0.000 0.000 -0.242 0.000 -0.449 -0.673 -0.552 0.126 -0.262 -0.262 -0.228 -0.228 0.000 0.110 0.167 0.167 0.000 -0.674 -0.275 -0.275 0.000 0.000 -0.308 -0.464 0.000 0.000 0.165 0.165 0.116 -0.065 -0.158 0.123 0.100 0.100 0.408 -0.524 0.409 0.192 -0.344 -0.692 0.386 0.000 0.000 -0.242 0.000 -0.449 -0.673 -0.552 0.126 -0.262 -0.262 -0.228 -0.228 0.000 0.110 0.167 0.167 0.000 -0.674 -0.275 -0.275 0.000 0.000 -0.308 -0.464 0.000 0.000 0.165 0.165 0.116 -0.065 -0.158 0.123 0.100 0.100 0.408 -0.524 7.8589209 NA 7.0347946 9.0335103 12.7313289 7.4555130 10.2365957 9.1669321 7.5757956 2.0702863 11.4654702 11.3912554 3.2222945 -2.0997418 2.7077236 8.9891563 4.5297273 10.1267803 11.2410528 11.1031042 10.3139961 -0.5145732 7.7936696 9.3638925 6.4081633 3.7583458 1.3598023 -2.0997418 10.0488447 9.7300909 6.1764923 8.3649138 8.8318443 10.3370146 11.1573139 1.0703206 8.9351671 -2.0997418 8.4385569 11.6530624 8.4539974 6.2132520 -0.5145732 5.3761028 9.2969729 2.2223100 2.6008168 -1.0997418 5.8890525 4.6173573 1.2223100 10.1793983 NA 5.9337921 10.8305511 11.0671589 4.6418350 9.1219554 14.4445780 8.1915390 4.7583512 3.6282837 10.7147504 3.3266380 -2.0997418 3.4239277 2.0702863 8.679258 7.744289 8.329775 13.485918 11.091964 10.538351 13.324206 13.867279 9.398155 11.382168 12.429799 13.187864 9.534725 7.611175 3.681730 8.773812 12.245635 10.634019 12.223071 7.723735 14.471008 9.172998 6.181138 10.029973 10.656507 10.801401 6.190388 3.707724 12.074592 9.035436 0.222310 11.784061 4.911596 8.628561 9.322959 9.881935 11.290134 9.778036 8.710940 11.313070 5.770734 12.388435 9.533818 10.090193 9.961739 12.608698 8.805755 11.425889 10.880329 9.052653 2.148283 8.651444 5.628290 9.988162 5.318219 11.011341 5.801234 9.666069 8.606001 8.073021 14.168050 9.868315 9.673507 12.304911 10.131589 4.167157 2.707724 11.008893 10.718751 10.048527 TCGA-AR-A24K 46 0 NA 1548 breast stage iia t2 n0 m0 female 2004 NA yes infiltrating ductal carcinoma 0 white NA NA NA 2 5 2 2 4 1 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6.589149e-07 1.733986e-07 24 8 4 32 32 11.9825434 10.0904314 12.5645337 9.7722908 8.6075696 8.6609297 10.8319020 9.9683265 9.7756814 12.7064346 11.2644564 10.5823451 0.2336427 12.7105529 5.0537978 8.3525577 7.7939498 8.1524801 10.1569444 13.3661166 -0.7663573 13.7494707 6.6930478 9.6113696 11.7102365 6.1819851 -0.1814766 7.5756913 9.6619770 3.3629047 7.5911685 8.2545969 NA 2.5555462 9.9201174 10.4848034 10.3538548 11.8010977 10.3846334 12.5928860 7.8556690 12.5697747 14.3997603 8.0419214 9.1591713 10.0121048 12.0007668 4.8335277 4.5004005 9.6546298 10.7359515 NA 11.5805460 6.3628994 4.7254685 5.7254712 10.4666373 12.1562942 10.8602385 13.8992304 13.1403666 6.6344960 11.8476365 11.5178771 11.9217579 11.8901534 6.1702556 14.0388317 12.5534301 -1.7666027 9.7703497 9.2187473 3.6659044 4.4234437 8.4010348 9.9733975 10.7891646 9.9139763 -0.7663573 8.4147689 11.7718058 11.4138369 10.3789122 9.1001230 1.18970 1.24200 0.19695 0.20060 -0.18156 -0.19087 -0.21948 -0.21948 -0.20112 -0.20112 0.92594 0.20503 0.20503 0.17886 0.17136 0.17226 -0.19725 -0.19725 -0.61499 0.82745 0.20240 0.15282 0.15282 0.15282 0.16385 0.16385 0.16385 -0.19262 0.20060 0.19033 -0.18484 0.19695 -0.18156 -0.18257 -0.19087 -0.19087 -0.22367 -0.21948 -0.21948 0.20030 0.20228 -0.20112 0.20580 -0.61037 -0.63102 -0.63840 0.20503 0.20503 0.17347 0.17136 0.17754 0.17754 -0.19725 -0.19725 -0.19725 -0.61201 -0.64696 -0.63491 0.21361 -0.65717 0.16055 0.15282 0.21514 0.16385 0.16385 -0.19944 0.20137 -0.64471 -0.65071 0.205 0.205 0.229 0.229 -0.197 -0.197 -0.613 0.129 0.202 -0.045 -0.630 0.153 0.153 0.215 0.215 0.164 0.164 0.201 1.219 -0.193 -0.193 0.219 -0.379 -0.185 -0.185 0.201 0.201 -0.182 -0.182 -0.191 -0.191 -0.219 -0.219 0.200 0.200 -0.201 -0.201 -0.605 -0.605 0.000 0.000 0.205 0.205 0.229 0.229 -0.197 -0.197 -0.613 0.129 0.202 -0.045 -0.630 0.153 0.153 0.215 0.215 0.164 0.164 0.201 1.219 -0.193 -0.193 0.219 -0.379 -0.185 -0.185 0.201 0.201 -0.182 -0.182 -0.191 -0.191 -0.219 -0.219 0.200 0.200 -0.201 -0.201 -0.605 -0.605 0.000 0.000 8.4503626 NA 3.4430762 9.9192417 11.4856909 7.0970598 11.4361998 7.5520696 7.7858631 NA 10.8625180 10.0266226 2.2336120 1.2336427 4.6765608 9.1746646 2.7571726 8.2573713 11.4054191 11.5869016 8.8372432 6.5282369 8.1907190 10.0345167 4.1643519 1.5555217 0.5555217 NA 11.2098229 6.4430695 5.4430695 9.4939483 4.3210767 9.3361700 11.4022890 3.4430762 8.9478625 NA 7.0633401 13.1118594 8.7344587 4.9885029 NA -1.7666027 9.0296563 1.9340635 1.8185643 -1.7666027 2.2336120 5.1585471 -0.1814766 10.4184922 NA 4.8483275 10.5687281 9.9357896 1.8185643 8.8400219 11.4902679 6.9547163 1.6930520 2.4815573 11.9156239 2.0409625 NA 0.5555217 2.3210911 14.514841 5.913098 8.519019 12.710553 9.449787 11.681991 13.366117 13.372489 9.776649 11.050401 13.403698 11.849017 9.654630 8.577913 3.091598 7.580130 12.154621 10.264973 11.821043 8.419731 13.495747 9.910896 3.961540 8.984324 9.983905 9.572058 4.788205 2.403540 11.264456 5.870241 3.362905 11.815641 6.272536 7.765544 11.887805 9.282104 10.205160 10.268416 7.907809 13.747560 3.659879 13.253491 10.353855 10.150243 10.012515 11.658046 9.208031 11.372689 10.404481 9.799195 4.066511 8.086942 6.272536 10.735951 3.693052 11.580546 6.844642 9.824672 10.466637 8.418529 15.132147 10.778098 10.590069 13.211970 10.382093 NA NA 11.348173 10.506247 9.575691 TCGA-AR-A24L 26 1 2866 NA breast stage iib t2 n1 m0 female 2005 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 1 1 4 3 1 1 3 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 3.81477e-07 5.26315789473684 23.6842105263158 2.63157894736842 52.6315789473684 15.7894736842105 10.75847816 10.27613651 11.19713774 10.02737318 9.24542673 9.20130402 9.51527367 10.19874165 8.67313449 14.11373129 11.58487811 10.56636120 -0.93704939 12.86175725 4.31095808 8.21150872 5.99967085 8.98412932 9.11424129 12.96837234 0.38493395 13.50448521 5.62527341 8.77985164 11.00150925 7.03744702 NA 8.04317168 9.64140495 2.81790972 8.40843759 8.45642259 0.38493395 5.45535024 10.29904656 10.93146907 10.61738132 11.71800395 10.38946184 11.71397189 1.23296768 11.14201705 14.07482741 8.71139888 9.15314488 11.61281700 11.98691687 5.08539916 3.45534695 9.83823106 11.56412309 0.06308871 11.14933444 7.88958062 5.93339796 4.88321023 10.07879581 11.75379425 10.14418292 12.54426416 12.85815881 8.51835967 11.41424766 10.82694184 12.00380474 10.53952545 5.28761266 11.98291987 12.66370025 1.06301966 9.99155076 9.36624221 2.52311026 4.52246384 10.09542247 10.21055531 11.06637454 10.50442038 2.38496157 6.35305153 12.24286369 11.07931830 9.79943430 8.72925637 0.2428000 0.2428000 0.0186630 0.0034687 -0.0175290 0.0193630 -0.4875900 -0.0237030 0.0592230 0.0592230 0.0592230 -0.0328600 -0.4754300 0.0277780 0.5164700 0.0227250 0.0093098 0.0093098 -0.4942300 0.0185230 -0.0142280 -0.0575200 0.3802300 0.8178600 -0.0208850 -0.0208850 0.7124600 0.5385400 -0.4996500 0.2428000 0.0000000 -0.4927700 -0.0484780 0.5401100 0.0843540 -0.4162800 -0.4875900 -0.0237030 -0.0237030 -0.0074720 0.0158660 -0.4905700 -0.0193140 -0.0107840 -0.0107840 0.0059700 -0.4754300 -0.0351760 -0.4898400 -0.4868000 -0.4797600 -0.4797600 0.0093098 0.0093098 0.0093098 -0.4807100 -0.4739500 -0.4739500 -0.0084385 -0.4377800 -0.4633400 0.3802300 -0.0824140 -0.0208850 -0.4496400 0.0176840 0.0062481 0.0277780 -0.0440090 -0.478 -0.478 0.000 -0.461 0.000 0.000 -0.481 0.000 0.000 0.461 0.023 -0.406 0.380 0.000 0.000 0.000 0.000 0.000 0.227 0.000 0.521 0.000 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.484 0.000 0.000 0.000 0.000 0.000 -0.478 -0.478 0.000 -0.461 0.000 0.000 -0.481 0.000 0.000 0.461 0.023 -0.406 0.380 0.000 0.000 0.000 0.000 0.000 0.227 0.000 0.521 0.000 -0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.484 0.000 0.000 0.000 0.000 0.000 8.3449625 NA 5.6176217 8.9264443 11.6704782 6.8797915 9.7442708 9.0651864 7.7336885 1.0630197 11.3179133 11.3938960 5.9022352 6.6629446 4.1291181 8.3085852 4.1291181 9.6399889 11.9069534 10.8558226 9.6657312 0.6480052 7.4745431 9.3513218 6.7212441 5.6328876 5.8639310 NA 10.2639310 7.5204136 8.3690939 7.9116550 6.3298197 9.6395167 10.2266820 3.5224701 7.8687763 0.8704239 7.9789118 11.6559565 8.2441845 7.2846196 NA 6.4161794 8.7798516 -0.3519948 4.0853992 2.6480052 3.9937740 6.3428285 1.9699333 9.8998717 NA 8.2773516 9.8423414 9.9657843 4.2724861 8.9885867 12.9156106 7.9578502 1.9699333 4.2127794 12.0062798 5.7703904 -0.9370494 5.4553502 2.7634753 15.0716961 6.7738381 8.9893284 12.8617573 9.5234883 10.5126969 12.9683723 13.0989913 8.2975505 11.1952107 12.7516651 10.1884458 9.8382311 8.2651560 0.6480052 7.9654074 12.4689051 11.07931830 10.92895889 7.07984101 13.63362838 9.10057930 5.22290500 8.87761482 9.57033143 10.34649988 6.05738528 7.30382366 11.58487811 6.72480987 4.66294603 10.72325111 7.58463260 7.33829515 12.58082474 10.06162271 10.72057406 9.01868230 7.35535374 13.16943170 5.29185032 12.50997670 10.61738132 10.01431707 8.60703065 11.87530995 9.28522349 11.36266965 10.50390155 9.41065380 0.06308871 8.29697538 8.02427923 11.56412309 5.24294161 11.14933444 8.85744828 10.33303557 10.07879581 7.43393757 13.26369957 10.09507812 9.76477193 12.69307188 9.64893383 NA 0.64800518 10.93916552 10.22101077 9.71811585 TCGA-AR-A24M 38 0 NA 3660 breast stage iiia t2 n2 m0 female 2005 NA yes mixed histology (please specify) 4 white not hispanic or latino NA NA 3 1 2 2 3 4 5 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.733986e-07 27.7777777777778 11.1111111111111 0 22.2222222222222 38.8888888888889 11.0427783 10.3503400 12.2117777 10.3587261 8.4177091 9.8300685 10.0200472 10.4128848 8.8673782 14.4686880 10.4275751 11.3712147 -0.3938421 12.7919746 4.5446647 9.3174470 6.0040968 8.6757404 9.2995538 13.3460583 2.5446585 13.7891335 5.9811060 9.1918868 10.6674379 6.3475346 NA 8.4968378 9.3725956 1.1910572 8.0309330 8.1910291 -0.3938421 5.1191362 10.5256750 10.3033239 11.3267386 12.7167132 10.6242669 12.0184602 3.2690331 11.3566342 14.5356180 8.5922406 9.1695808 12.2685126 11.9764817 4.9868887 4.8539956 10.0828130 13.5032820 -1.9788046 11.6718195 4.6935316 6.4177091 4.0434757 10.9300597 11.7746344 10.3373857 12.5767718 13.2012465 8.1059127 11.4158349 11.2695700 12.1341138 11.7408139 5.6649606 12.5198288 7.4723155 -1.9788046 9.7793275 9.2808475 2.9284840 5.2402723 10.5340916 10.5392656 9.6107554 10.0175778 3.9983851 10.1834956 12.7757830 11.7468965 9.8053302 9.6233392 0.95222000 1.01150000 -0.00415460 0.49023000 0.00277450 -0.00097017 -0.01272500 -0.00581400 0.00069327 0.00069327 0.00069327 0.00069327 0.00069327 0.00291330 0.00000000 0.00000000 -0.01257600 1.00670000 0.01516800 0.49632000 -0.00041585 -0.01161100 -0.01161100 -0.01161100 -0.01684100 -0.01684100 -0.01684100 0.00652620 -0.00526100 -0.00526100 -0.00110870 -0.00415460 0.00277450 0.00277450 -0.00097017 -0.00097017 -0.01272500 -0.00581400 -0.00581400 -0.00041585 -0.00041585 0.00069327 -0.00124730 -0.00124730 -0.00124730 -0.00124730 0.00069327 0.00069327 0.00291330 0.00000000 0.00000000 0.00000000 -0.59585000 1.00670000 0.53626000 0.00388540 0.49199000 0.49199000 -0.00433720 0.00558360 -0.01161100 -0.01161100 -0.59915000 -0.01684100 -0.01684100 0.00652620 -1.23900000 -0.00055444 -0.00055444 0.000 0.000 0.000 0.000 -0.079 0.504 0.000 0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.979 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.079 0.504 0.000 0.492 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.979 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.12570276 NA 4.04347575 9.76761855 11.18569697 6.40017926 10.78949534 9.34228828 8.08248918 -1.97880458 11.54760348 10.89255716 2.77599868 2.34303822 3.06550338 8.73191058 4.17085444 10.47437490 11.69109652 11.11105121 9.26368305 7.98110600 8.51995345 9.50693352 5.80246467 3.06550338 1.48052365 NA 11.66112317 7.14780834 8.00694595 7.80410262 6.20101431 9.56121290 11.04364546 7.21339686 7.79918123 -0.97880458 8.93996760 12.80527897 6.54074025 6.56413577 -1.97880458 2.48052365 8.61356112 1.19105724 3.66496063 NA 3.26903315 3.39752918 3.19102565 10.45599303 1.19105724 9.39124681 10.32972773 10.53729675 4.70760209 9.29315089 11.93258985 7.38085410 2.26903315 1.92801020 11.90154872 2.97530001 NA NA 0.02105325 13.0205318 4.3065029 8.3271659 12.7919746 10.7124138 10.9031741 13.3460583 13.0508660 9.5043759 11.4998574 13.5836448 9.1112165 10.0828130 8.9414570 -0.9788046 7.7267366 11.5841813 11.0168714 11.9413640 7.8587320 14.0244680 9.3748024 5.9518419 9.7132837 8.9392222 10.4487628 6.5407403 8.6182258 10.4275751 6.8508269 5.2878896 11.5922644 7.3654003 7.4477048 11.8502324 10.1539253 11.4600260 7.7145910 7.9083248 13.3751814 5.8155191 10.4177946 11.3267386 10.8742189 9.4347323 11.6335120 9.2201631 10.4792545 10.8912763 9.9825540 0.3430098 8.9539982 8.6933970 13.5032820 5.5985320 11.6718195 10.7816163 9.9420451 10.9300597 7.1529612 13.8723897 10.1944690 10.6193894 13.1463159 9.7967145 -1.9788046 NA 10.8962776 11.6808772 9.6966204 TCGA-AR-A24N 54 0 NA 3035 breast stage i t1 n0 m0 female 2005 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 2 2 2 4 4 6 5 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 32.1428571428571 25 0 32.1428571428571 10.7142857142857 11.2776286 10.4006346 11.9424810 10.1727136 8.7100777 9.0680476 9.7799388 8.8131713 9.4201790 13.2639156 10.7315922 10.8378333 6.3770161 12.6814405 4.8566272 9.1749067 7.7818587 8.1887194 10.8185583 12.8116451 5.5581880 14.2196107 3.8122312 9.2075664 11.3835109 5.3462123 NA 8.9363276 10.6422192 1.5491763 7.0758930 6.8996953 NA 5.2045516 10.0991750 10.5817947 10.2655029 10.3266176 10.2726881 11.9790230 NA 11.3666612 14.5182425 8.7716545 9.5914043 12.1287966 11.4903922 5.1461338 2.3147255 9.3173821 11.2466867 -1.7725053 11.3578403 5.2496387 6.4560882 4.8122312 9.4373322 11.5700389 10.5458125 13.0459518 13.1490642 7.4940563 11.3809801 10.8754341 11.6661915 11.3774930 5.1099121 13.9891326 10.0680476 NA 10.2423363 9.1122033 2.8751510 5.1580057 10.1539364 9.7161141 9.7281117 9.9146454 0.8122107 11.1801929 12.3483176 11.1024431 9.4952269 8.8863736 1.17090000 1.21010000 0.00000000 0.00000000 0.00917050 0.00346870 0.00013863 0.00013863 0.00097064 0.00097064 2.15110000 0.00083195 0.00083195 -0.00124730 -0.00124730 -0.00124730 0.00722170 -0.00360110 -0.74246000 -0.00027724 0.00138680 -0.05212600 -0.05212600 -0.05212600 -0.01078400 -0.01078400 -0.01078400 -0.00387790 -0.01147300 0.00680440 -0.00069303 0.00000000 0.00917050 0.00917050 0.00346870 0.00346870 0.00013863 0.00013863 0.00013863 -0.00221680 -0.00221680 0.00097064 -0.10936000 -0.10936000 -0.10355000 -0.11051000 0.00083195 0.00083195 -0.00124730 -0.00124730 -0.00124730 -0.00124730 0.00722170 -0.00360110 -0.00360110 -0.68305000 -0.00027724 -0.00027724 0.00138680 -0.34263000 -0.05212600 -0.05212600 0.01251600 -0.01078400 -0.01078400 -0.00387790 0.00610900 0.00041593 0.00041593 0.000 0.000 0.000 0.000 0.000 0.000 -0.637 0.000 0.000 0.588 -0.343 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.210 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.637 0.000 0.000 0.588 -0.343 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.210 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 8.5771040 NA 4.0852547 10.0216856 11.2109759 8.0302384 11.2757566 8.4791663 8.1205712 -0.7727518 11.7199992 10.7054782 1.9277069 -0.7727518 4.5848242 7.8197269 3.5126694 10.9900670 11.1946762 11.2805169 9.5726750 10.5946845 7.3795543 9.2696132 6.5848212 7.8511512 0.5492256 NA 11.5482113 1.9277069 6.3040857 7.9242371 4.9415148 9.4242652 10.8098822 4.6535359 8.1476227 5.0852504 7.6743533 12.0697183 8.5726748 6.1697847 NA -1.7725053 9.3007420 NA 2.5492009 NA 4.4560899 6.5736063 2.3147255 9.9367844 -1.7725053 6.4121447 10.2038338 9.8529786 3.3565523 8.9954540 13.9822877 7.5080404 2.7508423 2.8122312 11.5123830 1.3972006 NA NA 0.2272482 13.897803 5.304084 9.090682 12.681441 9.558187 11.520023 12.811645 12.777896 9.273589 11.297183 13.315685 9.530480 9.317382 8.546942 2.227279 7.140159 11.192333 10.8543476 11.7397633 7.4071785 13.4848042 9.1037866 4.6023084 9.1770966 10.0208730 9.5431382 5.7895128 9.8652531 10.7315922 6.4656741 4.0601598 11.8103525 1.5491763 8.2596736 11.9189042 9.9888210 11.0129265 8.3228777 8.3120784 14.4119902 7.0378412 12.8601872 10.2655029 10.6104340 9.5553836 11.0581810 9.5010653 10.5559447 10.7999700 9.5356088 0.8122107 8.4283154 8.3896610 11.2466867 7.7251215 11.3578403 8.2920124 10.0902944 9.4373322 7.8801688 13.2476421 10.4899519 10.4766796 13.6319457 9.9080688 1.2272482 NA 10.8225273 11.2610369 9.3655416 TCGA-AR-A24O 43 0 NA 3607 breast stage iiia t3 n2 m0 female 2005 NA yes mixed histology (please specify) 7 white not hispanic or latino NA NA 3 3 4 3 3 3 4 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.040392e-07 37.5 18.75 0 12.5 31.25 10.929585 10.290257 11.910121 10.118081 8.349635 9.387418 10.245777 10.362712 9.962843 10.743025 11.557749 10.653435 1.611172 11.997389 4.441244 9.434889 6.606149 8.603634 10.055032 12.884186 2.964805 12.977975 6.336060 8.663421 10.428862 6.485636 -1.558942 9.201131 9.636615 3.485633 7.749582 8.011098 3.248596 5.781092 10.055032 10.702456 10.086451 12.087014 10.103466 12.016664 2.528696 10.857248 14.462157 9.153899 9.590355 11.394348 11.730109 5.560183 3.833558 9.632302 12.535403 -1.558942 11.933096 5.528706 7.155488 4.507332 11.150111 12.069346 10.272154 13.130039 13.130149 7.640915 11.265605 11.135189 11.679946 11.570526 5.248599 12.263315 9.482902 -1.558942 10.186497 9.155488 3.398227 6.209426 10.453518 10.454565 10.165330 9.664037 3.611172 9.745023 13.340458 12.316800 10.036034 9.609288 2.3581e-03 2.3581e-03 0.0000e+00 0.0000e+00 -1.9325e-01 -3.3243e-03 2.7728e-04 2.7728e-04 -6.9799e-03 -6.9799e-03 -6.9799e-03 6.2481e-03 5.1359e-03 -5.9135e-02 -5.9135e-02 -5.9135e-02 -5.5444e-04 -4.7079e-03 -2.7724e-04 2.2193e-03 6.2481e-03 2.7745e-03 5.2749e-03 5.2749e-03 7.2217e-03 7.2217e-03 7.2217e-03 3.0522e-03 2.3581e-03 2.3581e-03 -3.4627e-03 0.0000e+00 -1.9325e-01 -1.9325e-01 -6.7749e-03 -2.7707e-03 2.7728e-04 2.7728e-04 2.7728e-04 6.0855e-05 1.8030e-03 1.9418e-03 -5.1227e-03 -5.1227e-03 2.2589e-03 1.1261e-02 5.1359e-03 5.1359e-03 -5.9135e-02 -5.9135e-02 -5.9135e-02 -5.9135e-02 -5.5444e-04 -4.7079e-03 -1.4114e-04 -2.7724e-04 2.2193e-03 2.2193e-03 7.3609e-03 -3.2681e-01 -3.6125e-01 5.2749e-03 9.0312e-03 7.2217e-03 7.2217e-03 3.0522e-03 5.5529e-03 -3.6329e-01 -3.6329e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.327 -0.353 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.363 0.000 0.000 0.000 0.000 -0.193 -0.193 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.327 -0.353 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.363 0.000 0.000 0.000 0.000 -0.193 -0.193 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.17595218 NA 6.24859745 9.85909508 10.96014156 6.15816533 10.27017243 10.17106293 8.42567539 5.18270819 11.86278146 11.11537300 3.57052365 2.14169436 4.27413491 7.91900094 4.19612701 10.48836648 11.56504066 10.58558218 9.03650004 5.16916338 7.67006135 10.28280697 7.64336631 7.21273177 1.44121786 NA 11.49024023 7.49652467 8.54845974 8.18943518 7.29922359 9.56452336 10.33416477 6.18271017 8.04115535 -0.55872901 8.41852266 12.51504942 8.20611425 8.36010569 0.02616265 3.24859555 8.17764427 5.24859935 3.96480523 0.76315658 6.20942607 5.34909630 2.52869633 10.01488973 0.76315658 9.92807758 10.20694304 9.77159924 6.03370050 10.37345736 12.85981994 9.67964723 2.68916495 3.72664596 12.01583609 3.57052365 0.02616265 0.76315658 2.52869633 13.311600 5.781092 8.106579 11.997389 10.325031 10.029489 12.884186 12.475612 9.267370 11.140381 13.595982 10.814108 9.632302 7.925058 1.026233 7.209427 11.143848 11.27827910 11.81953743 6.36010613 13.73039548 9.56536393 7.17595268 8.83570527 9.07342904 10.28052906 6.88418640 7.99198944 11.55774901 5.98040238 5.39543988 11.40540290 5.12774470 7.29766832 11.78997071 10.48358596 10.78109254 8.50058697 7.57566857 12.59075154 6.82062064 12.88480066 10.08645061 10.54354634 9.42637295 11.44721793 10.25822622 10.86225540 10.71911112 9.55237822 NA 9.34229050 9.16023777 12.53540275 6.69863105 11.93309568 8.44546311 10.81263259 11.15011092 7.30920075 13.99780849 10.31699195 10.66735366 13.10618977 10.08825120 4.29922267 0.02616265 10.70304367 10.80865735 9.56794695 TCGA-AR-A24P 47 0 NA 84 breast stage i t1 n0 m0 female 2005 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 5 6 2 4 4 4 3 4 3 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.161568e-07 3.467973e-08 30.7692307692308 7.69230769230769 7.69230769230769 38.4615384615385 15.3846153846154 11.2528604 10.3566202 12.0908455 10.4069828 8.7537198 9.6416633 9.7676730 9.3463974 9.5621794 12.7412163 11.4198368 10.5281007 5.4103615 13.3621804 4.5326162 9.8764681 6.5007065 8.6473998 11.0134064 12.4900085 0.7956838 14.1146405 7.1965303 8.6772743 10.6274856 7.0018506 -1.7893618 11.0532977 9.7885890 3.5682389 7.7244156 8.0733254 -0.2043993 5.2875018 10.4002038 10.7972933 9.6432299 11.2705395 9.8450454 11.8190584 1.3806186 11.5333204 14.3858477 8.0542011 9.3139693 11.1115549 12.5257668 5.6030061 3.7956527 9.7681517 11.8060621 -0.2043993 11.2492642 4.4586182 6.3604345 5.1993740 10.6838864 11.9248262 10.7928301 13.4528574 13.1765625 8.1310410 11.3497597 11.1146885 11.9388212 11.5259792 5.5235714 12.6447950 10.8729114 -1.7893618 10.2834907 9.3623388 2.5333391 5.2106889 10.3585290 10.3702441 10.7005360 10.3331926 2.7956423 8.9513121 13.9196911 12.1139109 10.1597852 9.4201415 0.9703900 0.9703900 0.0184540 0.0184540 -0.0148470 0.0887650 -0.5278200 -0.5278200 0.0540200 0.0540200 0.0540200 -0.0581980 -0.0581980 0.0000000 0.0000000 0.0000000 0.0277090 0.0277090 -0.0519230 0.0249000 -0.0051912 -0.5438600 0.5502700 0.5502700 -0.0094129 -0.0058824 -0.0058824 0.0535930 -0.0318360 -0.0318360 -0.0002073 0.0184540 -0.0148470 -0.0148470 0.0887650 0.0887650 -0.5278200 -0.5278200 -0.5389100 0.0698850 -0.0376930 0.0540200 0.0149590 0.0149590 0.0149590 0.0149590 -0.0581980 -0.0569130 0.0000000 0.0000000 0.0013181 0.0013181 0.0277090 0.0277090 0.0277090 -0.0519230 0.0249000 0.0249000 -0.0051912 -0.5492000 -0.5438600 0.5502700 0.0497540 -0.0094129 -0.0058824 0.0500910 0.0372890 -0.5708600 -0.5708600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.564 -0.549 -0.544 0.550 0.000 0.000 0.000 0.000 0.000 0.970 0.000 0.000 0.000 -0.571 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.564 -0.549 -0.544 0.550 0.000 0.000 0.000 0.000 0.000 0.970 0.000 0.000 0.000 -0.571 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3718198 NA 6.6327524 10.1825909 11.9379704 6.8285592 10.8196359 8.6816724 8.0546092 2.2107006 11.3375538 10.8988641 4.8831125 3.2106850 3.6369494 8.0451590 3.8253990 9.9197719 11.5188849 11.3923063 9.1735842 4.7805411 7.9249336 9.8884076 6.4821513 5.2441107 2.3806186 -0.7893618 11.2101597 5.0435764 7.2330559 8.3604354 6.4298570 10.0331633 11.1041792 5.3399711 8.5922309 -1.7893618 8.7459633 12.2257546 8.0435780 7.6072926 1.0180644 6.7843352 8.6731903 5.0308657 3.3399640 NA 4.5505375 4.5565827 2.5326162 10.2351351 -0.2043993 8.9093927 9.6975231 9.8368534 4.7025412 9.1039896 12.3146315 7.6390483 1.9111163 3.2981451 11.7827961 2.1175621 NA 4.0933320 1.5326162 14.479086 6.074874 8.550538 13.362180 10.374338 10.937545 12.490008 13.007336 9.371820 10.949836 13.500923 11.150084 9.768152 8.718483 1.795642 7.834570 12.011992 11.2288882 11.5750963 8.4833180 13.8264602 9.3373927 6.0308679 9.1047479 10.0148190 10.5154900 6.4201421 6.1295509 11.4198368 7.0018506 5.3399711 12.4157940 8.2700327 7.3946959 12.4250072 10.5646619 10.6182214 9.3992769 8.0260713 13.7057623 6.6536319 12.3766385 9.6432299 10.6251091 9.8567967 11.1537523 9.9928673 10.9352020 10.9720315 9.7537198 NA 9.2052395 8.1242506 11.8060621 6.9111283 11.2492642 9.7415821 9.8963041 10.6838864 7.9301625 14.0921367 9.8509330 10.2824856 13.7316136 10.2173648 -0.2043993 -0.4275954 10.8329687 11.0260713 10.3502394 TCGA-AR-A24Q 49 0 NA 3172 breast stage iib t3 n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 white NA NA NA 4 4 5 1 5 5 2 7 5 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.225215e-06 1.31783e-06 5.3030303030303 31.8181818181818 3.78787878787879 37.1212121212121 21.969696969697 10.2921576 9.6933957 11.3111253 9.9928292 9.7895455 8.6216362 8.3489729 10.7400630 11.1522737 12.7610891 11.4656882 10.8787938 -0.1952856 12.0875478 3.4676186 10.2242615 6.4958151 8.3770370 11.7311955 7.6077068 -1.7804133 8.6553601 7.5211858 10.3801917 11.2761583 6.3745074 -1.7804133 11.5595023 10.1351959 2.3896219 7.7095381 9.6237670 -0.7804133 5.9131766 8.8084047 11.0840695 9.7728391 10.5320057 10.4479074 11.6721885 1.6791085 7.0807770 15.8696197 7.4877404 9.5114362 10.9594705 10.8870232 3.4676186 NA 9.7155449 10.9484608 1.0270125 10.3272340 6.7155447 6.7471672 5.4388584 9.9531290 11.9297429 10.0954392 12.0275479 13.4109034 7.7607865 11.9580989 11.7675267 11.5725610 10.9922106 4.5947277 12.5790277 9.9442037 -0.7804133 9.7264934 9.9205631 3.5825078 5.5050906 12.4923197 9.3776684 10.7245089 10.2753113 9.1496879 8.7914426 12.5595399 12.2739550 9.4430884 10.0230138 0.0827650 0.8797700 0.9222900 0.5143800 -0.4311600 -0.4300700 0.2249900 0.3314100 -0.0785440 -0.0785440 2.4260000 -0.4373400 -0.0686630 -0.0004336 0.0000000 0.0000000 1.3856000 -0.0499650 -0.8314600 -0.4191500 2.1082000 -0.4404200 -0.4368000 0.6838200 0.3077700 -0.0385780 0.3551200 0.3125700 -0.8559100 -0.0381700 0.3138600 -0.3780800 -0.4311600 -0.4569300 0.4146300 -0.4545800 0.2249900 0.3314100 -0.4493200 -0.4405900 0.2880200 -1.1413000 -0.0343590 -1.1684000 0.5870400 0.4364800 -0.6032200 -0.3694400 -0.8081500 0.0000000 -0.3437300 -0.3344500 1.0871000 0.3031400 -0.4513600 -0.8129900 -0.4432900 -0.4432900 0.3427500 -0.0388500 0.4698100 -0.4368000 0.7873600 -0.0910230 0.3551200 0.3196400 -0.0302670 -0.0195890 0.3942900 -0.359 -0.359 0.000 0.000 0.332 0.332 -0.791 -0.419 -0.412 0.437 0.000 0.470 0.000 0.565 0.565 0.000 0.000 0.000 0.142 0.313 0.313 0.000 0.000 0.256 0.256 0.000 0.000 -0.431 -0.431 -0.430 -0.430 0.225 0.225 0.391 0.391 0.321 0.321 0.000 0.000 -0.457 0.454 -0.359 -0.359 0.000 0.000 0.332 0.332 -0.791 -0.419 -0.412 0.437 0.000 0.470 0.000 0.565 0.565 0.000 0.000 0.000 0.142 0.313 0.313 0.000 0.000 0.256 0.256 0.000 0.000 -0.431 -0.431 -0.430 -0.430 0.225 0.225 0.391 0.391 0.321 0.321 0.000 0.000 -0.457 0.454 7.2503572 2.4676186 6.5595392 9.1804159 11.8580127 6.4379385 10.2288187 10.5411136 8.3086767 2.1265765 11.1915926 11.7232064 3.3489689 -0.1952856 3.5050906 9.0698767 3.5416140 10.1269562 11.7038834 10.1998295 8.9484607 2.7432564 7.3592409 9.4394634 7.8545007 2.3896219 -0.1952856 1.8046318 10.4753087 5.3071516 9.0581059 8.4193623 7.9026844 9.9584831 10.4138311 3.6120104 9.4753087 6.6872959 9.1636698 12.8646728 7.1175351 9.3275607 -0.7804133 5.6954232 8.4557041 2.4676186 3.6459552 NA 7.0238209 2.9273276 5.4193636 11.7527762 7.3150871 9.9395065 10.4797273 10.6200357 5.1622060 9.8832480 13.3118276 8.3451036 4.8921141 4.0270479 10.8251694 2.5416140 8.2406697 2.1265765 8.8662487 13.001408 6.369437 8.215457 12.087548 9.061254 11.165134 7.607707 13.170382 9.043853 12.792035 12.783780 10.881468 9.715545 7.758849 1.920141 9.426704 10.786695 10.7175417 11.3932109 6.5550799 14.0876911 8.9088144 6.9339349 8.6449057 7.4412768 10.7667821 6.8417417 5.9407893 11.4656882 5.6205688 2.4676186 10.0671388 8.7876460 8.5286092 13.4672095 10.7135454 10.0242244 7.1265806 7.7255012 10.6372788 7.9044383 10.3964303 9.7728391 9.9628414 9.6939028 11.2824107 11.9471850 10.9412164 10.7938103 9.3111252 NA 8.9736839 9.8930210 10.9484608 8.9149182 10.3272340 8.3360338 10.5849187 9.9531290 7.3179851 13.8321553 9.8228527 11.0579090 12.7729592 11.1917722 3.3489689 0.2197106 10.3011733 9.9619993 9.3360338 TCGA-AR-A24R 45 0 NA 3430 breast stage iiia t1 n2 m0 female 2006 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 1 2 4 2 1 1 1 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.733986e-07 27.7777777777778 5.55555555555556 0 27.7777777777778 38.8888888888889 10.508594 10.326469 12.148362 10.082778 9.428725 9.424140 9.896302 10.621048 9.308854 14.751512 11.149230 11.144708 5.151311 12.212674 3.555215 9.147841 6.850044 8.523407 10.885710 12.803965 1.713916 13.916006 2.376874 9.636066 11.286923 8.037338 1.298893 11.118872 10.255327 2.829383 7.660326 6.974435 NA 3.083145 10.101925 10.571370 9.889249 11.226483 9.376279 11.605818 1.829403 11.959064 14.195139 8.598312 9.696901 11.573183 11.643412 3.486496 2.521252 9.246588 11.443811 NA 10.774828 4.538333 6.640698 5.226979 10.871675 11.851005 10.106940 11.739854 12.820361 8.658375 10.931461 10.415341 11.421410 11.309009 5.910306 11.732571 7.858565 NA 10.339312 9.565656 3.040156 5.117629 10.901466 10.306987 10.189979 10.863019 1.128953 8.212424 12.016642 10.319387 11.046876 9.195034 0.73544000 0.71805000 -0.00391500 -0.00391500 0.01499100 0.10975000 -0.69235000 -0.69235000 0.15676000 0.15676000 0.69404000 -0.10831000 -0.10831000 0.20072000 3.10980000 0.18900000 0.03294800 0.03944000 0.00562450 0.25695000 -0.39266000 -0.26279000 -0.24439000 1.38110000 -0.35991000 -0.35991000 -0.36827000 2.71830000 -0.33171000 -0.31509000 -0.14352000 -0.00391500 0.00010145 0.01499100 0.14172000 0.14172000 -0.69235000 -0.69235000 -0.71686000 0.00000000 0.00218210 0.15991000 -0.69108000 -0.69342000 -0.00764710 -0.00764710 -0.10831000 -0.13926000 0.20072000 -0.69525000 -0.70251000 -0.70901000 0.03294800 0.03944000 0.00689030 0.01806600 0.24925000 0.24925000 -0.42817000 0.03055400 -0.26530000 -0.24439000 -0.33367000 -0.35991000 -0.36827000 -0.02360200 0.66932000 -1.06800000 -0.36479000 -0.108 -0.108 -0.469 -0.670 0.000 0.000 0.000 0.249 -0.393 0.000 0.000 0.247 0.491 -0.334 -0.334 -0.360 -0.360 -0.305 0.430 3.657 3.657 0.669 -0.365 -0.160 -0.160 0.000 0.000 0.000 0.000 0.142 0.142 -0.692 -0.692 0.000 0.000 0.160 0.694 -0.693 -0.693 -0.143 0.104 -0.108 -0.108 -0.469 -0.670 0.000 0.000 0.000 0.249 -0.393 0.000 0.000 0.247 0.491 -0.334 -0.334 -0.360 -0.360 -0.305 0.430 3.657 3.657 0.669 -0.365 -0.160 -0.160 0.000 0.000 0.000 0.000 0.142 0.142 -0.692 -0.692 0.000 0.000 0.160 0.694 -0.693 -0.693 -0.143 0.104 7.5863257 NA 3.9362987 10.2636921 13.3632759 7.6424951 10.3393119 8.4554419 8.1308454 2.3768738 10.3762791 12.8335770 6.5593970 3.6207975 0.7138717 8.5945112 2.9869206 10.9683456 11.0267904 11.5498262 9.5599200 0.1289532 8.6777668 10.0699925 6.6046778 7.0115884 0.4509077 NA 10.0922023 7.6911873 6.1062248 7.2633716 8.2243418 10.2013925 10.7752786 3.6525094 7.7889408 1.7139157 7.3261616 11.9062002 8.0085283 5.9618340 NA 6.6525066 8.1787933 0.1289532 1.1289532 NA 6.1678637 4.3850099 2.2988636 10.6172872 0.1289532 7.1869363 9.6768034 9.8838325 4.1513149 10.1289450 14.1758131 8.3224704 4.7139047 3.0358350 12.5553407 0.9362893 NA 2.2988636 -0.2861283 14.592627 5.459861 8.518039 12.212674 10.502354 10.739278 12.803965 12.837274 9.461541 11.076582 12.747158 9.998153 9.246588 8.568776 2.298864 7.941122 13.472478 10.804240 12.306131 8.199066 13.717686 8.894645 6.538336 9.335959 9.149925 11.023766 6.652507 8.841472 11.149230 5.094730 2.035835 11.135096 4.571889 9.879899 10.145753 10.283447 11.086228 10.698563 9.204424 12.500245 6.516962 11.475107 9.889249 11.111582 9.172656 11.488420 9.306987 11.607715 10.915827 8.868726 NA 8.722457 6.558142 11.443811 6.023763 10.774828 6.242686 10.663005 10.871675 7.856866 13.286803 10.262408 9.625299 12.102284 9.397487 3.713905 -3.088040 11.461821 10.790946 10.013879 TCGA-AR-A24S 61 0 NA 2976 breast stage i t1 n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 3 6 2 4 4 1 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.363527e-07 3.81477e-07 23.6842105263158 31.5789473684211 0 21.0526315789474 23.6842105263158 11.1461869 10.1171624 11.6687426 10.4942968 8.0207239 9.5520525 9.3761297 10.3325209 9.7989420 12.3726253 10.6830889 10.6579212 0.5514914 11.7065603 3.5514914 9.4237023 5.4193872 8.7462459 10.8357349 12.4945167 2.8145299 13.6174101 8.0813098 8.8734174 11.2082715 4.0369165 1.5514914 9.4322970 10.7380986 2.1364539 7.9386445 7.5514891 NA 5.2629856 10.0604724 10.9286996 9.5327710 10.5983403 10.4637797 12.1368273 6.1661992 11.1573390 14.8990274 7.8882367 9.8557263 11.6089394 11.3924243 4.6725045 1.0368901 10.1308050 10.6859155 0.5514914 11.6943620 6.5287698 7.9489500 6.7133769 10.7662939 12.1028129 9.7946631 11.9491637 13.2160253 7.7841499 11.1129680 10.5884594 11.8746565 11.3954102 5.3994856 12.6853377 11.1976878 2.3994993 10.3578776 10.2277988 3.1846929 7.2068405 11.0541221 10.5528973 10.5551476 11.2775369 7.1364519 6.3170236 13.0593828 12.1658309 9.8971161 9.3183492 0.083130 0.083130 -0.532200 0.037999 0.025792 -0.574020 0.031370 0.031370 -0.884220 -0.884220 0.965660 0.223690 0.223690 0.943130 0.042949 0.042949 0.028134 -0.600940 -0.272850 0.036022 0.225690 -0.547790 -0.239910 0.339590 1.582700 -0.220150 -0.259320 0.153900 -0.549500 -0.267550 0.018597 -0.532200 0.073479 -0.565100 -0.574020 -0.574020 0.031370 0.031370 0.031370 0.044932 0.049331 -0.884220 -0.255210 -0.255210 -0.255210 -0.234410 0.223690 0.223690 -0.579740 0.042949 0.042949 0.042949 0.028134 -0.567950 -0.566290 -0.255090 0.036022 0.036022 -0.561710 -0.547990 -0.547790 -0.239910 -0.313940 -0.548790 -0.259320 1.211100 -0.180990 -0.227170 -0.227170 0.224 0.224 0.000 0.000 0.000 0.000 -0.273 0.000 -0.248 0.000 -0.548 -0.548 -0.240 0.000 -0.220 -0.220 -0.220 0.000 0.000 0.953 0.953 -0.181 -0.227 0.000 0.000 -0.532 0.000 -0.268 -0.268 -0.574 -0.574 0.000 0.000 0.000 0.000 0.081 0.966 -0.255 -0.255 0.000 0.000 0.224 0.224 0.000 0.000 0.000 0.000 -0.273 0.000 -0.248 0.000 -0.548 -0.548 -0.240 0.000 -0.220 -0.220 -0.220 0.000 0.000 0.953 0.953 -0.181 -0.227 0.000 0.000 -0.532 0.000 -0.268 -0.268 -0.574 -0.574 0.000 0.000 0.000 0.000 0.081 0.966 -0.255 -0.255 0.000 0.000 8.2365883 -0.7705351 5.6474124 10.2337814 11.3980764 5.9119240 10.0304609 9.8466749 7.8824058 3.1364539 12.5244689 11.8052669 2.8734195 2.3994993 4.1364539 8.8993318 4.7531231 10.9123362 11.7775400 10.4694579 8.6900168 2.3994993 8.2657346 9.8299385 6.9877847 6.7918037 0.2295879 0.2295879 11.1030051 5.9777539 6.9877847 9.1684054 6.5379002 10.3029862 10.3439541 5.3691140 8.2588482 -0.1854086 7.2983394 12.7977547 8.0449443 7.0043486 -0.7705351 8.0592839 7.7113607 1.2295879 3.5514914 NA 6.0750512 4.4991571 2.3170146 10.8224852 -0.1854086 8.4341320 10.3972928 9.5213074 7.4169132 10.2032584 13.9141453 10.4128862 5.3994856 3.9844526 10.4969329 1.2295879 -0.1854086 -0.1854086 0.5514914 12.430303 5.737357 8.909041 11.706560 10.354377 10.086765 12.494517 12.474074 9.434132 11.438710 13.248109 12.068076 10.130805 8.712369 2.688986 8.288905 10.735869 11.0578959 11.9703958 6.4341328 13.1661060 9.0789660 6.5103322 8.2039754 8.9247893 10.8702172 7.1632522 5.4774895 10.6830889 4.4390114 -0.7705351 11.5098968 6.1243778 7.8639001 11.3450924 10.3950961 10.7171499 9.0141960 7.5056853 11.9735539 6.2295610 12.0445269 9.5327710 10.7418076 9.8698059 11.4913621 9.8359662 11.3897476 10.6584446 9.8761197 1.5514914 9.3106450 8.8923719 10.6859155 5.7452615 11.6943620 8.7531231 10.4813393 10.7662939 7.7415115 14.1798207 10.0580942 10.6205360 12.7833103 10.3073781 4.1364539 5.3170254 10.6455668 10.6226833 9.7580151 TCGA-AR-A24T 46 0 NA 3202 breast stage iiic t3 n3 m0 female 2006 NA yes infiltrating lobular carcinoma 15 white not hispanic or latino NA NA 1 5 4 3 3 3 4 3 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.508365e-07 1.387189e-07 41.1764705882353 29.4117647058824 11.7647058823529 11.7647058823529 5.88235294117647 10.4061551 10.3868500 11.5065124 9.7562292 8.7109280 9.5852965 9.3116981 10.0228413 9.8120894 9.9405893 10.1599388 10.7345749 3.1204183 12.7772325 3.9201122 9.4463404 6.5798424 8.6027330 9.3320283 13.1578048 2.3655246 13.8262667 6.3767505 8.9486055 10.9605472 7.8146715 -0.6344194 8.3064090 8.2633683 5.1204100 9.3989459 7.9783913 NA 5.8331279 10.3506533 11.0657458 9.8463131 11.2665783 9.7340294 11.5842375 1.5354558 10.4085502 14.8409714 7.7380619 10.0542103 11.3193556 11.6668762 5.1857001 4.3878933 9.4948060 11.8304515 -1.6344194 12.0980084 4.9802310 6.3255249 5.7492259 10.6967198 11.7589134 10.3106009 13.1188441 12.9873458 8.7042592 11.4073531 11.3643989 11.9870025 11.1105669 4.8573739 12.2089533 12.7946681 NA 10.2899643 9.1526091 3.4363351 5.8493388 10.6199611 9.8920221 10.0093791 10.1485211 3.8249511 7.3226249 13.5911822 13.2805619 9.9306250 9.5133638 0.37528000 0.37528000 0.01153900 0.00013863 0.00430210 0.00346870 0.00208050 -0.41718000 0.00083195 0.00083195 0.00083195 -0.01531200 0.00055459 -0.41113000 0.00208050 0.00208050 -0.00373950 -0.00408920 -0.41926000 -0.00069303 0.00305220 -0.41421000 -0.00429290 -0.00429290 -0.01780300 -0.01780300 -0.01780300 0.00430210 -0.41036000 -0.41773000 -0.00650500 -0.41860000 0.00430210 0.00000000 0.00346870 0.00070923 0.00208050 -0.41718000 -0.42855000 0.00152550 0.00152550 0.00083195 -0.00273900 -0.00273900 0.00610900 0.00610900 0.00055459 0.00055459 -0.41113000 0.00208050 -0.41432000 -0.41432000 -0.00373950 -0.00235530 -0.00235530 -0.41333000 -0.00069303 -0.00069303 0.00069327 -0.41300000 -0.41421000 -0.00429290 0.00722170 -0.01780300 -0.01780300 0.00430210 -0.00221680 0.00249690 0.00249690 0.000 0.000 -0.411 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 -0.413 -0.410 0.000 0.000 0.000 0.000 0.000 -0.410 -0.035 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 -0.413 -0.410 0.000 0.000 0.000 0.000 0.000 -0.410 -0.035 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.44767176 6.86934831 6.37675053 10.13205175 10.60183614 6.71632974 10.51463487 9.79917621 8.07713830 3.22349978 12.47796241 11.75142305 2.75783400 5.33130752 4.09344186 8.26487980 4.51527091 9.98069270 11.66901826 10.97493249 9.07632927 3.45299071 7.55039819 9.80015119 6.80015054 4.99487837 -0.04945693 -0.04945693 10.87554526 7.00937853 7.45563546 7.94483912 7.01298091 9.73772411 10.48089176 5.71425101 8.09344345 -0.04945693 8.56151020 12.95815512 8.52160594 7.46092027 -0.04945693 6.84530312 8.47404741 4.68745267 4.47404660 NA 4.61344914 6.17055805 2.88908410 10.09556845 -0.04945693 9.25882440 10.21961203 10.06205585 5.77491354 9.86387358 12.66007186 9.24280707 1.53545580 4.61344914 12.87980546 1.17287150 -1.63441943 -1.63441943 1.68746387 12.362791 4.705375 8.526655 12.777232 9.908071 10.613747 13.157805 12.362349 9.633480 11.192667 13.493356 10.993513 9.494806 8.480566 1.172872 7.565195 11.394983 11.51574615 11.23222226 7.69643972 13.33319722 8.91626972 5.88908410 8.50507434 8.43564401 10.33287170 7.00576825 6.97285345 10.15993880 7.19841263 5.36552458 11.28940742 7.68293561 6.29838705 11.46141437 9.62350001 11.10677916 8.59674399 7.05552106 12.23154608 5.84125612 12.09021261 9.84631309 10.79806478 9.65554181 10.63113794 10.11455430 10.60273282 10.76906754 8.91626972 1.68746387 8.86596643 7.90648418 11.83045147 6.19207183 12.09800836 8.03971527 10.42183204 10.69671981 6.76212820 13.78771910 9.55781576 10.25844508 12.87851021 10.13287973 0.36546859 -0.04945693 10.42452933 10.75757194 9.79806478 TCGA-AR-A24U 47 0 NA 3128 breast stage iia t1 n1 m0 female 2006 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 4 3 1 1 2 6 5 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 2.080784e-07 21.0526315789474 47.3684210526316 5.26315789473684 15.7894736842105 10.5263157894737 10.5118938 10.0275131 11.5659780 10.3028491 7.4924661 9.5200474 9.5004007 10.1561292 10.5271845 12.1535110 10.1201077 10.4155318 3.5342858 16.3703821 6.8437955 9.7800431 3.6529339 8.6290054 7.7042115 11.8186316 -1.5950969 10.2123586 8.0897524 8.7246758 11.0950016 7.1598915 -0.5950969 9.9397928 11.3316703 3.3118954 7.7647535 7.7625555 0.9899383 6.7669476 9.9422221 10.3801352 9.5122208 10.2071161 10.2551905 11.8046821 0.7269184 6.7448540 15.1106091 8.6655353 9.2575097 11.1004495 11.6098804 5.1329223 4.8968579 9.6979005 12.2337352 NA 10.6805462 6.4871535 7.8122717 5.7269320 11.1804082 11.5853790 10.4408338 12.4009474 12.8200852 6.0844831 11.2629847 10.3210511 11.1073928 11.5002359 5.2504955 12.4402323 8.7559428 NA 10.3926230 9.1278112 2.4068087 6.8101449 9.2559718 10.6930046 10.2975465 10.8042816 2.4924685 7.1430964 13.3584272 12.7596663 9.9290555 8.3965256 0.3782500 0.3665300 0.0200630 0.0200630 -0.0785010 0.3148200 0.0567980 0.0567980 -0.2543100 -0.2543100 2.3979000 0.5441800 2.2886000 -0.0782780 -0.0782780 -0.0782780 -0.0822690 -0.0822690 0.1820700 0.0566550 0.0344110 -0.1330300 3.6569000 -0.2265000 -0.0327230 1.0506000 -0.0278080 0.0652260 -0.0151910 -0.0151910 -0.0634350 0.0200630 0.0576530 -0.0011087 -0.2300600 -0.1909900 0.0567980 0.0567980 0.0473910 0.0579390 0.0579390 -0.2543100 0.0000000 0.0000000 0.0000000 0.0000000 -0.2464200 -0.2464200 -0.0782780 -0.0782780 -0.0993410 -0.0993410 -0.0822690 -0.0822690 -0.0822690 0.1820700 0.0741210 0.0741210 0.0382060 -0.1948700 -0.1330300 -0.1916200 -0.0295300 -0.0327230 -0.0278080 0.0425550 -0.2430200 -0.1370700 0.8492900 0.470 0.000 0.000 0.000 0.000 0.000 0.182 0.000 0.000 -0.195 -0.195 -0.174 -0.174 0.104 0.000 0.000 0.000 0.367 0.367 0.000 0.000 -0.250 0.156 0.000 0.000 0.000 0.000 0.000 0.000 0.124 -0.191 0.000 0.000 0.000 0.000 -0.254 0.375 0.000 0.000 0.000 0.000 0.470 0.000 0.000 0.000 0.000 0.000 0.182 0.000 0.000 -0.195 -0.195 -0.174 -0.174 0.104 0.000 0.000 0.000 0.367 0.367 0.000 0.000 -0.250 0.156 0.000 0.000 0.000 0.000 0.000 0.000 0.124 -0.191 0.000 0.000 0.000 0.000 -0.254 0.375 0.000 0.000 0.000 0.000 7.831268602 6.281520220 5.335740490 8.998394673 10.505994409 5.732242061 11.406939562 10.103812461 8.063036385 3.726929282 13.214018103 11.602826985 4.019710809 5.146471941 4.262981807 8.082723343 3.797324317 10.872863919 11.514018079 10.802945636 9.043439658 2.574924978 7.671790133 9.759803982 8.448030795 12.821471343 0.989938264 -0.009989098 11.695886491 4.671791548 6.993718511 8.610796752 6.287645899 8.986119352 10.743182874 5.186361891 8.237893495 -0.595096878 8.223585693 12.896543646 7.122679965 6.753731547 0.989938264 2.311880887 8.299821606 5.594829179 1.574924978 3.652933862 7.432909313 4.918810775 3.449402901 10.978177464 -1.595096878 9.392978292 10.515813160 10.022011951 6.329816067 10.328702524 13.499287569 10.081842236 5.544556481 4.427371515 10.208731228 2.311880887 -0.595096878 NA 0.405012083 9.8986689 8.1498375 9.3290738 16.3703821 10.4252891 11.4078187 11.8186316 8.9305245 8.7114870 10.9953568 13.6477312 10.7311523 9.6979005 10.0547089 -0.5950969 7.3936882 12.1535110 11.2884106 11.0598634 4.4493963 13.8298579 9.0178721 7.9402789 8.3693443 8.5496619 9.8985440 7.7224162 6.5749280 10.1201077 6.8396321 0.9899383 10.6000683 7.7822139 7.5788308 12.7464530 11.0736671 11.6262887 8.5364621 8.4050036 10.8489832 9.2559718 12.4720254 9.5122208 10.2006375 9.3372185 11.7183119 10.2167797 11.0063102 10.5271845 9.5258896 -1.5950969 9.5099693 10.4456085 12.2337352 9.9993282 10.6805462 7.9805429 10.5642443 11.1804082 8.0252786 13.4212896 10.4633337 10.1485759 12.4876517 10.2239851 5.2876459 2.4924685 10.7924825 10.8946008 9.3965256 TCGA-AR-A24V 52 0 NA 3203 breast stage iib t2 n1 m0 female 2006 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 1 1 4 3 1 1 5 4 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 40.9090909090909 18.1818181818182 4.54545454545455 9.09090909090909 27.2727272727273 10.3728913 10.7843623 11.3929633 9.7240771 9.2591802 8.8781567 8.5782372 10.1723670 10.2217715 13.2272800 11.6608909 10.4287864 1.0921398 12.6288534 4.0396561 10.4832106 4.0661236 8.3400481 9.4326064 12.1519477 0.6067265 13.0019064 0.6067265 9.4609387 10.6240588 3.0921228 -1.7150122 11.7152573 11.6657676 1.8697135 8.1176556 8.9331232 1.0921398 4.0126849 9.9159426 11.3335930 10.1935334 12.7009693 9.8911708 11.6875112 1.4547023 10.5362480 15.0013439 7.9241242 9.3175001 11.2434995 11.9032657 4.5326910 NA 9.5896873 11.3043563 -0.1302075 11.2656191 6.5655362 7.1795837 6.4395832 10.5503806 11.6784241 10.2066065 12.3692418 12.7584713 8.2875803 10.9263658 10.4679729 11.1409965 11.2092070 5.1427483 11.8954444 10.7853585 -0.1302075 10.8217412 9.7073560 1.8709368 7.3535438 10.2501891 9.8374346 10.6673896 10.6695493 6.6813706 6.3985077 13.0623805 11.7987398 9.3735538 9.0628427 0.00000 0.00000 0.14935 0.14935 -0.13709 0.80247 -0.14605 -0.14679 0.72244 -0.75349 1.01840 0.14995 0.14995 0.16280 2.51300 0.14816 -0.48806 0.12800 -0.44178 -0.13005 -0.12784 -0.35099 0.53134 0.53134 0.10643 0.10643 0.10643 0.68549 0.00000 0.00000 -0.12828 0.14935 -0.13709 -0.12823 0.80247 0.80247 -0.14605 -0.14679 -0.14679 0.19786 0.14780 -0.80069 -0.13264 -0.13264 -0.13264 -0.13264 0.14995 0.14995 0.16280 -0.43442 -0.44825 -0.42626 0.12402 0.12800 0.12800 -0.44426 -0.13005 -0.13005 -0.12784 -0.43983 -0.35099 0.53134 -0.33318 0.10643 0.10643 0.69540 -0.12823 0.15054 0.15054 0.150 0.150 0.138 0.138 0.128 0.128 -0.442 -0.130 -0.128 -0.279 -0.440 -0.351 0.531 -0.333 -0.333 0.106 0.106 0.000 0.000 0.685 0.685 -0.128 0.151 -0.128 -0.128 0.149 0.149 -0.137 -0.137 0.802 0.802 -0.146 -0.146 0.000 0.000 -0.753 0.253 -0.133 -0.133 0.000 0.000 0.150 0.150 0.138 0.138 0.128 0.128 -0.442 -0.130 -0.128 -0.279 -0.440 -0.351 0.531 -0.333 -0.333 0.106 0.106 0.000 0.000 0.685 0.685 -0.128 0.151 -0.128 -0.128 0.149 0.149 -0.137 -0.137 0.802 0.802 -0.146 -0.146 0.000 0.000 -0.753 0.253 -0.133 -0.133 0.000 0.000 8.1286868 NA 6.7277095 9.9460983 11.1580174 7.1167058 9.7885913 9.7297597 8.6099584 2.5326910 11.4884194 11.9542607 3.8697234 NA 4.2155000 8.1628163 4.2155000 11.3824685 11.0681731 10.3380126 9.0177808 0.8697135 7.5538919 9.9916932 5.6941559 9.8883918 4.7604977 NA 11.5090688 3.4546892 7.4546908 7.3775229 6.9782528 10.2131765 9.9040686 3.0396473 8.1719864 NA 8.4114699 12.1487582 8.3508548 6.9955716 -1.7150122 7.8102863 8.2036289 2.3722278 2.1916574 NA 4.2389626 5.2182193 3.0396473 9.9213902 NA 6.6684695 9.8398340 9.8865363 3.6066909 9.5362480 14.1502330 8.6021781 1.9852089 4.2847658 11.4372089 5.2155039 NA -0.7152490 1.4547023 14.6476093 4.7925587 8.3318892 12.6288534 9.6770829 10.1431351 12.1519477 12.0488078 9.1727478 10.3161221 13.1642531 9.8925581 9.5896873 8.8631381 -0.1302075 8.1081329 11.4175866 11.0325389 11.1771186 7.5885460 14.1250761 8.7089318 4.4942172 8.6268403 9.4236773 9.7073980 6.9536505 3.7441934 11.6608909 6.6899071 3.0396473 10.6450639 5.9642461 6.7750150 11.5503806 10.0685823 10.4945235 9.4640527 8.9068173 12.7036064 4.8083284 12.3680487 10.1935334 10.2103199 8.8422293 11.3124988 9.7746135 10.5899723 10.3119804 9.1365147 NA 8.7410790 7.4135594 11.3043563 4.4140476 11.2656191 10.3430955 10.2844133 10.5503806 6.8161466 13.2998321 10.1723670 9.9218432 13.4065014 10.0363096 NA 0.7150147 10.5724779 10.3765314 9.3768619 TCGA-AR-A24W 55 0 NA 1550 breast stage iib t2 n1 m0 female 2006 NA no infiltrating ductal carcinoma 3 white NA NA NA 1 5 4 3 3 3 4 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-07 0 40 20 0 40 0 10.7449363 10.7134127 11.9039460 9.7563143 8.3813513 8.9428203 10.6927548 10.3443366 10.6019269 13.7895456 10.9708088 10.8565850 3.1986670 12.4149200 4.5991988 10.2686191 7.0978351 9.1676715 9.9857782 12.1816528 2.8027309 12.6985051 7.1170456 9.4556698 10.8577275 8.2465463 -1.4453620 10.5634942 9.5342282 3.4616988 8.0325615 8.3573193 2.2552288 5.0466569 9.8522924 10.7569269 10.4092819 11.6292790 10.1588929 12.1545997 9.0345833 10.9689597 14.5641505 9.2467646 9.1237091 11.8956267 11.5628814 5.6422655 4.1397642 9.7284801 12.5325301 -1.4453620 10.8871194 6.2895117 5.5548037 4.2552439 10.7219075 12.1430492 10.2604354 12.6354540 12.9364811 7.2962702 10.9216716 10.9719567 11.3510454 11.7557016 5.3229881 11.6628373 11.9669759 0.5548344 9.9540810 9.5923500 4.1736312 3.8402014 10.7803117 9.9810677 10.5974884 10.1218084 4.4127815 8.2254591 13.4646492 13.0733947 9.7020080 9.2886656 0.4176900 0.4324300 0.0069435 0.0069435 -0.1358700 0.1563600 -0.0426520 -0.0426520 0.1577100 0.1577100 0.1577100 -0.1533600 -0.1533600 0.0125160 0.0125160 0.0125160 0.1396900 0.1396900 -0.1369100 0.0037465 -0.1563100 -0.0088526 -0.0088526 -0.0088526 0.1152100 0.1152100 0.1152100 0.1486000 0.0000000 -0.3038100 -0.1463400 0.0069435 -0.1358700 -0.1358700 0.1563600 0.1563600 -0.0426520 -0.0426520 -0.0426520 0.5827400 -0.1488800 0.1577100 -0.3024800 -0.3024800 0.0139110 -0.0045768 -0.1533600 -0.1533600 0.0125160 0.0125160 0.0125160 0.0125160 0.1396900 0.1396900 0.1396900 -0.1369100 0.0037465 0.0037465 -0.1563100 0.0768540 -0.0088526 -0.0088526 -0.1370400 0.1152100 0.1152100 0.1486000 -0.1481100 0.4539400 -0.1827000 -0.153 -0.153 0.000 0.000 0.140 0.140 -0.137 0.000 -0.156 0.000 0.000 0.000 0.000 -0.137 -0.137 0.115 0.115 0.000 0.396 0.149 0.149 -0.148 -0.183 -0.133 -0.133 0.000 0.000 -0.136 -0.136 0.156 0.156 0.000 0.000 0.434 -0.149 0.158 0.158 -0.302 0.000 0.000 0.000 -0.153 -0.153 0.000 0.000 0.140 0.140 -0.137 0.000 -0.156 0.000 0.000 0.000 0.000 -0.137 -0.137 0.115 0.115 0.000 0.396 0.149 0.149 -0.148 -0.183 -0.133 -0.133 0.000 0.000 -0.136 -0.136 0.156 0.156 0.000 0.000 0.434 -0.149 0.158 0.158 -0.302 0.000 0.000 0.000 7.7096208 0.8767232 6.0386184 9.5089994 10.8517192 6.3305781 10.6046515 9.9462937 8.1767815 6.2827233 11.2150218 10.9398916 4.1986592 4.8027309 4.8767330 8.2289952 3.5089990 9.4049900 11.7792570 11.2223581 8.6195458 4.5089990 7.3492193 9.9524776 6.2272289 8.0486585 0.5548344 -0.4451656 11.4895996 7.0224089 7.8309271 8.2307602 8.1621335 9.0762464 10.3947941 6.5827095 7.5716116 1.3621613 9.2724793 13.2719975 8.0606143 7.0018867 1.1397969 4.1986592 9.0244449 -1.4453620 2.2552288 1.1397969 4.7836243 5.1101586 2.6422626 10.0832571 2.3621613 10.1827928 10.3653746 10.1444542 5.0939615 9.8092411 11.4376371 8.5292177 2.2552288 2.6422626 10.7997614 0.1397314 1.1397969 -0.4451656 2.0142482 13.6823686 4.6422684 8.3685842 12.4149200 10.1593562 11.1743353 12.1816528 12.1734179 9.2486907 11.3441329 14.2525851 12.3691852 9.7284801 8.3262924 -0.4451656 7.8121908 11.4984167 11.5712631 11.4251677 7.7247280 13.8485250 9.7630374 6.1472599 9.6302822 8.1602824 9.8762689 5.1547169 7.5576184 10.9708088 4.3361620 3.6840894 11.5906331 6.5320831 6.8007356 12.6160054 10.5413562 10.9257628 9.2707651 7.1170456 12.5628814 6.4127832 14.4485229 10.4092819 10.1336474 9.2448010 11.8166041 9.4914409 10.2979544 10.9834249 9.3046723 9.8367330 8.6339143 7.9209066 12.5325301 6.9599440 10.8871194 7.0978351 11.0606295 10.7219075 7.1658275 14.3020782 10.1275033 10.5086357 13.2088236 9.6917941 0.5548344 0.5548344 10.5583209 10.7319111 9.9789694 TCGA-AR-A24X 52 0 NA 3004 breast stage iia t2 n0 m0 female 2006 NA no mixed histology (please specify) 0 white NA NA NA 3 5 4 3 4 4 5 6 4 1 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.774378e-07 29.1666666666667 4.16666666666667 0 25 41.6666666666667 11.21182078 10.24927253 12.17429106 9.83307018 8.26433093 9.87969903 10.54511652 9.14923777 9.51347081 8.77197370 11.78086165 10.44089833 -1.02561753 13.24577506 4.52890258 8.53273267 6.25043676 8.46616499 9.65730666 12.85475652 3.06177620 13.58193133 5.16413460 9.06574732 11.10841743 4.61816816 -0.02561753 10.58856174 9.92559672 2.29625182 8.32966316 7.58902188 -1.02561753 4.64673870 10.07365986 10.80205166 10.48359220 12.25334219 10.70393281 11.58349078 9.36555563 11.95212859 14.73097260 8.84244023 9.99459754 11.83636818 11.73959815 4.52890258 -0.02561753 9.23875462 11.48927262 -1.02561753 11.34853646 7.09843324 5.74249673 3.22223269 10.93793063 12.34077087 10.91755945 13.81891974 13.26361051 7.72250496 11.32773457 10.92566963 11.31999449 11.32414611 5.34935112 12.08495846 11.90910865 0.55924706 9.75074500 9.43066643 1.78580162 4.61816816 11.53225432 10.49640313 10.09907963 10.10166163 3.22223269 11.06838975 13.64773155 13.28733677 10.31638676 9.66692751 1.2828000 1.3131000 -0.0071958 -0.0071958 -0.0110600 -0.0059522 -0.0111980 -0.0111980 -0.0057697 -0.0057697 -0.0057697 0.0038854 0.0038854 0.0058309 0.0058309 0.0024758 0.0144700 -0.0119910 -0.0084385 0.0023581 0.0115390 0.0167050 0.0167050 0.0167050 0.0255310 0.0245040 0.0245040 0.0204830 0.0070826 0.0070826 -0.0094046 -0.0071958 -0.0110600 -0.0110600 -0.0059522 -0.0059522 -0.0111980 -0.0111980 -0.0111980 -0.0083163 -0.0027616 0.0162860 0.0069435 0.0069435 0.0069435 0.0069435 0.0038854 0.0162860 0.0058309 0.0058309 0.0024758 0.0024758 -0.0058140 0.0000000 0.0000000 -0.0084385 0.0023581 0.0023581 0.0115390 -0.7007500 0.0167050 0.0167050 0.0083351 0.0255310 0.0245040 0.0204830 0.0083351 -0.6967600 -0.7278200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.042 -0.684 0.000 0.000 0.000 0.000 0.000 0.000 1.283 1.283 0.000 0.000 0.000 -0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.042 -0.684 0.000 0.000 0.000 0.000 0.000 0.000 1.283 1.283 0.000 0.000 0.000 -0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.31416221 4.25971690 4.75567276 10.09584559 11.76343809 6.43013303 11.43527980 8.83849833 7.96948553 -0.02561753 11.27466463 10.31962855 2.67475440 2.14424220 2.14424220 9.08935567 1.97430904 9.94225879 11.22223957 11.39374562 9.31416199 1.55929601 8.22461047 9.96795809 6.68167133 6.25971502 -1.02561753 NA 10.92450337 5.43374399 6.19348002 8.59819360 4.10359835 9.86981914 11.22786409 4.36662996 8.39637701 -0.02561753 7.97712706 12.39137338 8.10101653 6.45004494 NA 2.14424220 8.84775612 NA 3.49786780 NA 6.16413661 5.44305957 1.55929601 10.46916762 NA 7.45409197 10.20072429 9.99667982 4.43374066 9.38476346 11.93702734 7.14923802 3.06177620 2.97430904 11.04878805 3.43374733 NA 1.97430904 1.29625182 13.004577 5.259713 8.988332 13.245775 10.458631 11.251018 12.854757 12.006013 9.605917 11.208231 13.965169 11.297648 9.238755 7.664310 -1.025618 7.429639 11.288612 11.41310390 11.98902998 8.52890101 13.71446119 9.28037363 6.52120625 9.11641908 8.95380882 10.82233636 6.54416696 5.31416357 11.78086165 6.12405926 4.06177620 11.99372902 7.37945375 6.00497996 12.34608867 10.30074150 10.70095593 9.48111545 8.18132621 12.42139526 5.54416696 11.55305738 10.48359220 10.15359915 9.76139831 10.93937477 9.18498342 10.94585559 10.79528877 9.88570400 -0.02561753 9.36918203 7.91030214 11.48927262 6.74249673 11.34853646 8.37945332 10.82906354 10.93793063 7.89615315 14.56781988 10.17949438 10.57143345 13.43194942 10.67475176 2.43373398 0.97430904 10.76913401 10.99251219 9.84313465 TCGA-AR-A24Z 57 0 NA 3001 breast stage iia t2 n0 m0 female 2006 NA no infiltrating ductal carcinoma 0 white NA NA NA 4 1 2 2 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-06 2.080784e-07 16.6666666666667 11.1111111111111 13.8888888888889 30.5555555555556 27.7777777777778 11.0451332 10.2235250 11.4709145 9.8317772 8.4894109 9.8098679 11.0509043 10.8181229 9.0402801 14.4062982 12.2251814 11.1227162 2.3323069 11.9077469 4.6802174 8.8058148 5.3322926 8.7767439 10.4391539 13.3247814 3.4578307 13.2715389 3.0823109 9.1001530 11.8315960 3.8270568 NA 8.2071354 11.2304140 -1.1272106 6.9656192 7.1466573 0.4578569 4.2991274 10.3176181 10.4204796 9.7140332 12.3675926 10.6751764 12.0107337 0.1948435 13.0171219 13.8496275 8.8863593 9.8153729 11.6994105 12.2813908 4.0021444 5.5523433 9.1588422 11.9178537 -1.1272106 10.8926264 4.0427844 6.3727084 4.5452889 10.5696122 12.3667800 10.3771845 12.5968429 13.1316121 7.8966164 11.4041216 10.8840369 11.3841205 11.6069365 4.7917255 12.1316488 11.3020072 -2.1272106 9.7906070 9.9426473 2.8021725 6.0021444 10.2282131 10.1163336 10.4994837 10.7876208 5.6344132 7.4653191 11.7006017 10.5730850 10.0737607 9.5140106 0.5290600 0.4079400 0.5343800 0.0468620 0.0037465 0.0088920 0.0280600 -0.0647770 -0.5436100 0.4737500 1.0780000 -0.0403450 -0.0147410 -0.5296100 2.2275000 1.5509000 0.4653600 0.4653600 -0.5658500 0.0748400 0.3499000 0.3937000 0.3937000 0.4429100 1.1967000 0.2996300 0.2996300 0.4773500 -0.0986820 0.1888900 -0.0120240 -0.5875500 -0.0392090 -0.0053992 -0.3500800 -0.3472100 -0.5973100 0.7115200 0.2622300 -0.0060999 -0.0265770 -1.1448000 -1.2929000 -1.2929000 -1.1084000 -0.0580580 -0.0147410 -0.0060904 -0.5564400 -0.1193900 -1.1336000 0.3672300 0.4653600 0.4323900 0.4391900 -0.5258300 -0.5712000 0.0303100 -0.1162600 -0.0308130 -0.5926300 0.3937000 0.5022100 -0.0482070 0.2996300 0.3885800 0.4631400 0.4260300 -0.6140300 0.000 0.000 -1.078 -1.078 0.465 0.465 -0.526 0.000 -0.116 0.000 0.000 -0.243 0.349 0.471 0.471 0.000 0.300 0.000 0.000 0.389 0.389 0.463 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.347 0.367 0.367 0.000 0.000 -1.078 0.534 -0.539 -0.539 0.209 0.209 0.000 0.000 -1.078 -1.078 0.465 0.465 -0.526 0.000 -0.116 0.000 0.000 -0.243 0.349 0.471 0.471 0.000 0.300 0.000 0.000 0.389 0.389 0.463 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.347 0.367 0.367 0.000 0.000 -1.078 0.534 -0.539 -0.539 0.209 0.209 8.1196026 5.9281453 6.1857457 9.5081267 11.4683526 6.2352005 10.4547687 8.4379260 8.4499699 -1.1272106 11.2849025 11.9925846 3.2991274 4.6542236 4.6143270 8.2533232 3.6542178 10.1660462 11.8372931 11.0040759 8.9409684 6.3404679 9.4582940 9.9439891 6.0175211 4.8501443 3.3964198 -2.1272106 10.6315017 8.1902746 10.8849627 9.5571723 8.6352440 10.7721358 10.2724070 2.8270670 8.8444054 5.3964233 6.5802209 11.1667647 8.1823382 6.4727753 -0.5422481 8.1278907 10.0053618 1.7797640 1.8728681 -0.5422481 3.8728583 5.0949328 1.1947805 10.3579366 -1.1272106 9.3363863 10.3035759 10.1550817 3.9603264 10.9953665 14.1140259 8.2204833 1.5732776 2.3964335 13.2996837 6.5488188 NA 2.9172599 0.1948435 15.038040 6.861547 8.366717 11.907747 9.865446 10.535753 13.324781 13.155190 8.575900 11.551242 12.952180 9.899040 9.158842 7.532858 1.042784 7.824147 12.486997 11.0530820 11.9646279 9.0008563 13.3058912 8.4312828 4.3158053 9.0682341 9.9869297 10.9664166 6.1064823 9.7362739 12.2251814 3.9813869 10.8177571 10.4946849 8.7547406 9.3779887 9.8039688 9.8597707 11.2736081 7.7767436 8.0490350 12.5884487 3.9172599 11.5222103 9.7140332 9.6782029 9.7257815 11.6178009 8.6101094 11.9222001 10.6410463 8.4578245 NA 8.4036290 10.9130952 11.9178537 3.3322926 10.8926264 6.3924977 10.5521222 10.5696122 7.8994548 12.4544745 10.4524136 9.1267094 13.4199975 10.3939716 0.6802343 0.4578569 11.4179472 11.1158872 10.1190088 TCGA-AR-A250 58 0 NA 2707 breast stage iia t2 n0 m0 female 2006 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 2 4 3 2 2 5 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.525908e-06 5.201959e-07 16.6666666666667 43.3333333333333 1.66666666666667 28.3333333333333 10 10.4068597 10.1613127 11.2921642 9.7348740 8.6090032 9.6610701 9.7957100 10.9592007 9.6492204 14.9940807 10.7044209 11.4642042 1.9497590 15.7899738 2.9497777 9.3316239 4.6815786 8.7179564 9.4370377 13.0893233 -0.2726458 13.5887250 -1.8577826 8.8480495 11.2293826 8.8376453 2.8972985 9.4473387 10.0605349 1.3123167 8.6282465 7.6442543 0.1424788 5.0612794 9.6733110 10.3160941 9.9875150 9.9988426 10.2132089 11.5580268 2.3123457 10.7729117 15.0711436 8.8145860 10.2414360 11.2255639 11.2361647 4.9237767 6.3712365 8.9521853 10.5007935 -0.8575212 11.1531200 9.9023052 7.2404489 5.0250598 10.6074732 11.9307275 9.9910399 12.1468131 12.6811516 7.5997976 10.8547291 10.2299064 11.6124403 10.7797212 5.0372328 11.5821181 10.6284979 -0.8575212 9.9093600 8.8411218 3.0998675 6.4552993 10.5315106 9.9327656 10.2295484 10.6718476 5.0127832 10.0038917 12.5927906 11.1534696 9.9473547 9.3718367 0.503480 0.474410 -0.046854 -0.116060 2.978800 -0.284890 0.381050 -0.608440 1.092100 -0.627790 0.192540 -0.198370 -0.198370 0.413290 0.362320 0.984940 -0.087447 0.290560 -0.200000 0.192480 -0.212680 -0.445990 3.656900 3.656900 -0.293070 0.215300 0.445960 0.339820 -0.660870 -0.180300 -0.026714 -0.046854 0.063080 0.285010 -0.284890 -0.284890 0.381050 -0.608440 -0.092478 0.124170 -0.028660 -0.609310 0.143250 0.143250 0.121610 0.121610 -0.198370 -0.198370 0.351040 1.114300 -0.616810 -0.616810 -0.087447 0.290560 0.290560 -0.224660 -0.205480 -0.205480 0.084354 0.237670 -0.445990 0.569170 -0.356580 -0.293070 0.672890 0.339820 -0.488900 -0.226990 -0.226990 -0.198 -0.198 0.413 -0.204 0.291 0.291 0.869 0.192 -0.213 0.238 0.238 -0.358 -0.358 0.120 -0.236 -0.012 0.215 -0.229 0.245 0.340 0.340 -0.607 -0.227 0.000 0.000 0.000 0.000 0.000 0.222 -0.285 -0.285 0.381 0.000 0.124 0.000 -0.609 0.000 0.122 0.122 0.000 0.000 -0.198 -0.198 0.413 -0.204 0.291 0.291 0.869 0.192 -0.213 0.238 0.238 -0.358 -0.358 0.120 -0.236 -0.012 0.215 -0.229 0.245 0.340 0.340 -0.607 -0.227 0.000 0.000 0.000 0.000 0.000 0.222 -0.285 -0.285 0.381 0.000 0.124 0.000 -0.609 0.000 0.122 0.122 0.000 0.000 8.2639504 4.0966161 6.6221968 9.8411216 11.3413224 6.0533894 10.7688106 9.2176822 9.0168066 -0.8575212 11.7568969 11.4305276 4.2921633 3.0966161 3.0492997 7.9286865 4.3518686 11.6680602 11.9465481 10.6244687 9.2417649 6.1703237 8.3712356 8.5076460 6.7717734 4.3712382 2.1424134 NA 11.1303916 5.9816198 7.8618059 8.0687133 4.0966161 9.8256441 10.0819962 2.8972985 8.4598295 -0.8575212 7.9657843 12.1497948 7.9481610 7.3123421 -0.8575212 3.4278207 7.3518703 6.3567354 2.7862827 NA 5.6737995 3.7312810 2.2298647 10.5258513 NA 6.5217951 10.4421975 9.9481609 5.6342709 10.0326814 13.7716029 8.7283185 3.0003967 4.3518686 11.0229572 4.8566621 NA NA 0.1424788 13.805781 6.495564 10.222568 15.789974 9.764011 10.681576 13.089323 12.221485 10.198377 10.834161 13.307756 8.516370 8.952185 9.374838 NA 9.564482 11.558819 11.1883473 12.2737113 5.6342709 12.4037774 8.2934335 6.2717002 9.5070989 9.5910495 10.8243407 6.8077529 10.0227659 10.7044209 6.6737981 0.7273542 10.4817103 6.9368334 9.0117486 11.8781846 10.5765239 10.7529805 7.9481610 9.2437362 11.2321985 6.2138799 12.9575586 9.9875150 10.1820216 10.5631668 10.7630951 9.9937757 10.5155541 10.4691274 9.1717042 NA 8.8853160 7.5451305 10.5007935 6.7534414 11.1531200 9.5185424 10.4670505 10.6074732 6.6893117 12.8761209 9.7003593 9.8402535 11.9815224 10.4223177 0.1424788 0.1424788 9.9437212 10.4179596 9.9043837 TCGA-AR-A251 51 0 NA 3030 breast stage iiia t2 n2 m0 female 2006 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 4 4 6 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.88413e-06 9.363527e-07 6.42857142857143 23.5714285714286 2.85714285714286 40.7142857142857 26.4285714285714 11.4733576 9.8930183 11.6430935 10.2263747 8.8250290 9.0203380 8.6936152 9.7383438 10.7829475 12.0067554 9.9187865 9.7734612 4.0510588 11.3168954 2.7046064 8.7013824 4.4082159 8.7155138 10.2299592 5.5640092 -1.4246877 9.7734612 9.9923844 9.5812669 11.3274947 8.4129508 2.4333067 9.9563252 10.4093990 2.0988911 9.9764693 9.1845017 -0.4246877 4.8607245 11.6328072 10.2692456 10.8838043 9.9265384 10.3881020 12.0815067 0.7452804 9.5378577 14.3937680 8.8184317 9.5777864 12.0770981 12.2112112 4.5178363 NA 10.6256819 10.1275118 1.8232602 9.5262433 5.7502501 6.6441014 6.3201561 9.2304065 11.5757633 10.4627341 10.7823374 13.1274218 7.6720384 11.1638035 10.2494447 11.4562458 11.3743011 5.8745314 11.8713072 9.2831136 7.6306057 11.1586409 10.9760692 2.7456461 5.6627866 12.1561116 10.4644467 12.1458311 11.1366110 3.9676390 5.3891056 12.9642821 11.4777924 9.8333001 7.9847141 0.043723 0.435470 -0.366910 0.813180 0.064225 0.058795 0.026514 0.417470 -0.393410 0.853240 0.983690 0.919050 0.035383 0.088113 0.029747 0.058081 -0.381230 -0.383690 -0.387050 -0.373250 0.489060 -0.010508 -0.010508 0.006109 -0.061017 1.778500 -0.464510 0.817270 0.403110 -0.844030 -0.414540 -0.404840 -0.449110 -0.405730 -0.849390 -1.292900 0.462120 0.029606 -0.429420 -0.013815 0.036370 -0.390510 0.074121 -0.368270 0.442460 -0.431920 -0.392680 -0.444260 -0.871820 0.000000 0.526780 -0.874630 -0.656400 -0.381340 -0.414320 -0.814740 -0.388390 -0.393410 -0.856390 -0.436800 0.392970 -0.010508 -0.870250 -0.073076 -0.464510 -0.376960 0.056940 0.017684 -0.929860 0.853 0.000 0.000 0.000 -0.417 -0.417 -0.348 -0.440 0.000 -0.471 -0.471 0.000 0.000 0.000 -0.352 0.000 0.000 0.000 0.000 -0.377 -0.377 0.405 0.000 0.000 0.000 -0.367 -0.367 -0.364 -0.364 -0.402 -0.402 0.000 0.000 0.000 0.000 0.074 0.465 -0.386 -0.386 -0.350 -0.350 0.853 0.000 0.000 0.000 -0.417 -0.417 -0.348 -0.440 0.000 -0.471 -0.471 0.000 0.000 0.000 -0.352 0.000 0.000 0.000 0.000 -0.377 -0.377 0.405 0.000 0.000 0.000 -0.367 -0.367 -0.364 -0.364 -0.402 -0.402 0.000 0.000 0.000 0.000 0.074 0.465 -0.386 -0.386 -0.350 -0.350 7.5837515 -2.4243004 7.6454437 8.7477506 10.4338870 6.1700953 9.4614007 9.5558554 9.0673765 -0.4246877 11.9729309 11.0138187 5.1900340 2.0988911 3.7847762 10.5659589 2.9676482 9.6910171 11.6849905 10.9800655 9.2304065 3.4822158 8.7993247 9.6792665 6.1222171 5.9107135 1.2757818 1.0347792 10.6004627 5.0510545 7.2010320 9.2263749 10.0826222 9.8859472 10.6142421 2.0347439 8.2887097 4.1144836 8.2503979 12.2893002 8.4294122 5.9062388 -2.4243004 2.7452373 8.1442294 5.8184978 3.8607245 -1.4246877 5.3235142 5.6060454 4.8041413 11.0718024 3.7452481 11.7997017 10.7370848 10.3093976 6.8630352 9.3142597 12.5449344 9.7524312 2.1602748 4.1299094 10.4264865 1.1602748 6.9151731 2.0988911 7.2353192 10.761578 9.021889 8.729508 11.316895 9.729154 11.246311 5.564009 11.556712 9.677259 11.630078 13.095543 11.253483 10.625682 8.309186 5.725070 8.412162 11.928952 10.5608093 9.8184970 5.8472528 12.8778542 9.6848273 5.6197182 8.9312248 10.0726759 8.8100626 5.5468667 7.2809554 9.9187865 7.9794000 -1.4246877 10.8491186 8.0701789 8.9488896 13.5602755 9.9190640 11.0111235 7.9028755 6.5611657 9.8262137 7.0988848 12.0457328 10.8838043 10.0651711 9.6162976 11.9829228 10.8012836 8.9894797 10.9208669 10.0853454 -1.4246877 9.2208373 7.8050312 10.1275118 6.3468133 9.5262433 8.1593461 9.8619501 9.2304065 8.2540375 13.5734287 11.0181370 11.0772847 13.2370177 10.1948553 2.1602748 0.7013273 10.1980613 10.8581219 9.8462024 TCGA-AR-A252 50 0 NA 2838 breast stage i t1 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 3 4 2 1 4 4 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-07 3.467973e-08 57.1428571428571 0 0 14.2857142857143 28.5714285714286 10.8180495 10.7344587 11.9696264 10.7157714 9.0540768 10.0851035 9.9126677 10.9095598 8.3935891 14.7833621 10.4389458 11.0688777 -0.7548695 10.5565770 4.5305140 8.8300750 6.1277550 9.2750899 9.8135438 12.3537186 3.3325791 12.5138007 4.8450233 8.7369657 10.8281953 7.4739314 -1.7548695 10.2774613 9.4811268 4.3536338 8.0684795 8.2295307 -0.7548695 6.6417180 10.4275069 10.6198803 9.7573592 11.0927571 10.5072073 12.1575341 11.9086706 10.7266597 14.1500763 9.0681852 9.2188100 11.4349371 11.8232493 5.0264725 6.2949607 10.1691827 12.2312212 NA 11.7476957 6.8263133 8.8356996 5.4250228 10.8939194 11.9272293 9.9991649 12.1327139 13.1656049 7.4324642 10.8934701 10.7730488 11.7773466 11.5101414 5.2895062 12.4557838 11.1141279 -1.7548695 9.8281952 9.6255735 2.9472173 7.3999307 10.4853076 10.4763337 10.6100679 10.5938407 3.3325791 6.1154765 12.6466587 12.1822104 10.5004362 8.8943688 0.1303600 0.1303600 0.0153080 0.0153080 -0.0557690 0.0098669 -0.1175700 -0.1175700 0.0114000 0.0114000 0.0114000 0.0114000 0.0114000 0.0104240 0.0104240 0.0104240 -0.1119500 -0.1119500 -0.1982500 0.0072217 0.0091705 -0.1532400 -0.1532400 0.8810600 -0.1220500 -0.1220500 -0.1220500 3.3987000 -0.1186000 -0.1186000 0.0000000 0.0153080 -0.0557690 -0.0557690 0.0098669 0.0098669 -0.1305600 -0.1175700 -0.1175700 0.0095883 0.0095883 0.0114000 -0.1169800 -0.1146900 -0.1146900 -0.1305700 0.0114000 0.0114000 0.0104240 0.0104240 0.0104240 0.0104240 -0.1119500 -0.1119500 -0.1119500 -0.2290800 0.0072217 0.0072217 0.0091705 0.0081959 -0.1532400 -0.1532400 -0.2481200 -0.1170400 -0.1220500 -0.1166500 -0.1119500 -0.1391000 -0.1391000 0.000 0.000 0.000 0.000 -0.112 -0.112 -0.229 0.000 0.000 0.000 0.000 0.200 0.200 -0.248 -0.248 -0.122 -0.122 0.012 0.130 -0.117 -0.117 -0.112 -0.139 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 -0.112 -0.112 -0.229 0.000 0.000 0.000 0.000 0.200 0.200 -0.248 -0.248 -0.122 -0.122 0.012 0.130 -0.117 -0.117 -0.112 -0.139 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 -0.115 -0.115 0.000 0.000 8.2702519 6.1216288 5.7449576 9.9674932 12.8828694 5.9627896 10.0504533 9.8351802 8.0320027 3.4545707 11.9817258 11.4030515 3.0524681 2.7686713 3.9175368 8.4654909 4.7045456 11.6852030 11.4645836 10.9245926 8.8671644 1.7045622 7.6859815 10.2123388 9.7299354 8.6513176 1.8300930 -1.7548695 10.8952667 7.8889685 7.4787324 7.4859042 6.0843173 8.8084517 10.7327013 5.7289273 7.3536373 -0.7548695 8.4679075 12.7143091 8.0620963 6.9104485 -1.7548695 6.0132970 8.8607422 1.0524855 2.8300727 1.2451305 9.3252638 3.9206458 5.6880572 9.9390349 NA 10.4398693 10.3242639 9.9153261 6.2785349 10.8104527 14.2308210 10.5511741 6.7086370 5.3536373 12.7904390 1.7045622 0.2451305 3.4545707 1.0524855 12.842783 5.567040 9.230243 10.556577 10.522400 10.516284 12.353719 13.423349 9.561298 11.333073 13.331041 10.178434 10.169183 8.163976 NA 8.449684 12.622459 10.761059 11.812237 6.278535 13.069024 9.367293 9.297001 8.748938 8.297681 10.043414 8.304457 9.809262 10.438946 6.115477 3.374400 11.411903 5.867165 7.761797 11.281973 11.365512 10.670853 8.711699 7.938599 11.790560 9.981937 12.127671 9.757359 10.758593 9.776006 11.097837 9.578268 11.135377 10.728424 10.129665 NA 9.779600 8.114614 12.231221 9.819233 11.747696 6.780388 11.003544 10.893919 7.759195 13.831659 10.258086 11.004377 12.496743 9.482323 6.969626 2.332565 10.932707 10.982571 9.680262 TCGA-AR-A254 50 0 NA 2605 breast stage iiia t2 n2 m0 female 2007 NA yes infiltrating ductal carcinoma 9 white not hispanic or latino NA NA 4 5 6 1 2 2 1 3 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7.282743e-07 2.080784e-07 32.1428571428571 28.5714285714286 0 17.8571428571429 21.4285714285714 10.7041119 10.1845032 11.6708048 10.2524197 9.0318594 9.4532912 9.4358402 10.3446265 10.1855838 12.7466465 10.2299015 10.5504322 3.2616662 16.8577761 4.2833662 9.6894601 5.6519041 8.6042170 7.6456368 12.3706706 -1.7828934 12.5890536 4.6767075 9.3159669 11.4238335 4.2616737 NA 10.8202889 10.4963070 3.6095895 8.2927560 7.7427978 -0.1977654 5.4169478 9.2493226 10.0161536 9.3984293 11.5546201 9.9077115 11.8469751 3.1241627 9.1967022 14.6776848 8.7632838 9.2867266 11.3447877 12.0047714 4.2396424 -1.7828934 9.2826930 11.4397700 -0.7826452 11.3298793 5.8683287 7.6909827 5.9587429 10.1931249 11.8485677 10.1579576 12.1200289 12.9078752 6.6224179 11.5297345 10.5309110 11.1603411 11.1480143 4.8466337 11.5173434 11.7066232 -0.7826452 9.5786725 10.8157947 3.1798295 6.3310190 9.1196521 10.2620126 10.6690032 11.0828169 0.8022346 10.4643144 12.7871918 12.1189924 9.7015964 8.5846916 0.87408000 0.70701000 0.00538000 0.00402430 -0.09036100 0.29963000 0.00110930 0.00110930 -0.33260000 -0.33260000 1.91090000 0.34648000 2.74270000 -0.00581400 -0.00581400 -0.00581400 -0.34515000 0.00319100 -0.00664320 0.00249690 0.31819000 -0.32600000 3.65690000 0.29374000 0.00332990 0.00332990 0.00332990 3.48200000 -0.32693000 -0.32007000 -0.00235530 0.01181800 -0.09036100 -0.09036100 0.29772000 0.00208050 0.00110930 0.00110930 -0.00498440 -0.00055444 -0.00055444 -0.33773000 0.00110930 0.00110930 0.00110930 0.00110930 -0.32193000 2.40520000 -0.00581400 -0.00581400 -0.33399000 -0.01023200 -0.32007000 0.00319100 0.00319100 -0.31050000 0.00249690 0.00249690 0.31819000 -0.31168000 -0.32600000 -0.30240000 -0.00180140 0.00332990 0.00332990 0.23814000 0.00499690 -0.00415460 -0.05245100 -0.308 -0.308 0.000 0.000 -0.320 0.000 0.000 0.000 0.318 0.074 -0.277 -0.326 0.000 0.000 0.000 0.000 0.000 -0.321 0.701 0.236 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.573 1.905 0.000 0.000 -0.190 0.069 -0.308 -0.308 0.000 0.000 -0.320 0.000 0.000 0.000 0.318 0.074 -0.277 -0.326 0.000 0.000 0.000 0.000 0.000 -0.321 0.701 0.236 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.573 1.905 0.000 0.000 -0.190 0.069 8.3733598 NA 5.2285032 9.5604626 11.9004909 5.8507819 10.4840635 9.0928113 7.3406486 -0.7826452 12.4924557 11.4253192 2.3047447 NA 3.2172773 8.6581461 4.5392022 10.8095004 11.4906355 11.1478295 9.4382598 -0.1977654 7.0937936 9.2059616 6.9383764 5.3465598 0.2172307 NA 10.5684923 3.9451957 7.3796686 8.7871327 7.4120337 9.1879436 10.9963807 4.8897023 8.1714731 0.5392333 7.6309049 12.9903131 8.0580551 5.8539009 1.0246034 5.9107638 8.8264557 NA 2.1241627 4.9721642 6.4934008 5.2739671 2.4652170 10.7819028 0.2172307 6.3047392 10.5281737 10.2613295 5.2059633 9.6245447 13.7369439 9.8759347 7.3284128 4.0999179 11.9348463 2.9177182 -1.7828934 NA 0.5392333 13.055496 5.945198 8.416949 16.857776 9.928944 10.698824 12.370671 12.077200 9.618156 10.761517 13.657173 11.651254 9.282693 9.921181 2.304745 7.903778 12.003955 10.8982957 11.4148008 5.8171909 13.8038230 8.2806720 8.6529471 9.0737024 9.3368665 10.0485089 7.0907211 4.7408412 10.2299015 4.1241710 2.2172617 11.1902567 6.5392053 7.9763161 12.7610338 10.6815674 10.8518611 9.3346798 8.2186853 11.1585080 7.5835988 11.9276701 9.3984293 10.2098613 10.0584481 11.3995161 9.6843729 10.8076301 10.8324468 9.5301599 3.8896974 8.6157536 8.0823449 11.4397700 7.3897045 11.3298793 8.4230701 10.6928761 10.1931249 8.1876703 13.8953543 10.1312883 10.3695618 12.7900364 10.9458353 2.8022346 -0.1977654 10.6679727 10.6818227 9.9591652 TCGA-AR-A255 62 0 NA 2161 breast stage i t1 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 2 4 3 3 4 5 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352509e-06 3.467973e-07 17.6470588235294 35.2941176470588 3.92156862745098 27.4509803921569 15.6862745098039 10.9070678 10.8230549 11.4210579 9.9653364 8.4074407 9.4554267 9.5318171 9.8988832 9.4630600 13.6916588 10.7544687 10.5965784 5.0535111 12.8503537 4.5408642 9.2030678 5.7298953 8.8492618 9.7719874 12.5596002 4.0669330 13.3467565 5.9630949 9.2530911 11.3025021 7.0535100 0.3120843 9.6646277 9.8656728 2.8356007 7.3176677 7.9720395 1.3120262 5.1700252 10.2828685 10.6229402 10.0735948 11.7482345 9.9147424 11.5754595 4.9267538 10.8771456 14.4421515 8.3790881 9.8287285 11.6091030 11.7829565 5.1824063 4.0933996 10.0756709 11.9774905 NA 11.3821645 5.5018690 7.4515952 5.1322231 10.6109652 11.6485501 10.5318170 12.2858305 13.1372011 7.5092604 10.8521716 10.2007753 11.6948026 11.1534113 5.8512018 12.7837822 10.6895252 NA 10.3985115 9.4316332 3.7523311 6.3835056 10.7216996 10.1657429 10.2068613 10.7248780 3.5215031 8.3176681 13.0497134 11.8447647 9.7918238 8.6783656 0.4543100 1.5096000 -0.3460400 0.6666300 -0.3291100 0.3460300 0.3307900 -0.3473800 -0.7094200 -0.6794700 0.7895300 0.6528100 0.0125440 0.0069715 0.2972700 -0.3362700 0.0248570 0.0000000 -0.3350300 -0.2567000 0.0014147 -0.3569000 0.3078000 0.3078000 0.1422400 0.1422400 0.1422400 0.7183300 -0.3578100 -0.3319000 0.0068324 -0.3660700 -0.3291100 0.0104520 0.3460300 0.3460300 0.3307900 -0.3473800 -0.3473800 -0.3476500 -0.3460400 -0.7094200 -0.3339600 -0.3339600 -0.3339600 0.0054419 0.0125440 0.0125440 0.0069715 0.2972700 -0.3362700 -0.3522200 0.0248570 -0.0036294 -0.0036294 -0.3265600 -0.2984800 -0.2984800 -0.3316500 -0.3622400 -0.3569000 0.3078000 -0.3324600 0.1422400 0.1422400 -0.0254550 0.0047470 -0.3581500 -0.3581500 0.000 0.000 0.000 -0.336 0.000 0.000 -0.327 -0.257 0.000 0.330 0.005 -0.356 0.301 -0.321 -0.321 0.142 0.142 0.000 0.000 0.000 0.689 0.000 -0.358 0.000 0.000 -0.327 0.650 -0.329 0.000 0.346 0.346 0.331 -0.347 -0.333 -0.333 0.080 0.790 -0.334 0.000 0.114 -0.148 0.000 0.000 0.000 -0.336 0.000 0.000 -0.327 -0.257 0.000 0.330 0.005 -0.356 0.301 -0.321 -0.321 0.142 0.142 0.000 0.000 0.000 0.689 0.000 -0.358 0.000 0.000 -0.327 0.650 -0.329 0.000 0.346 0.346 0.331 -0.347 -0.333 -0.333 0.080 0.790 -0.334 0.000 0.114 -0.148 8.3564374 6.5599705 5.2068620 9.6908803 11.4377798 6.1768493 10.1870249 9.9285188 8.0864680 3.4413241 11.4800888 11.6135911 4.6870831 2.7043629 4.3344110 8.4426139 4.0399631 10.7714751 11.6286079 11.1381947 8.9586023 8.1543938 7.2662403 9.6624302 6.9950378 7.9932821 0.8970080 NA 11.1575336 5.5018690 6.8818995 8.0868305 6.1385913 10.2007297 10.5504482 5.3120443 8.1226153 0.3120843 7.9595018 11.9856839 7.8078984 6.9666796 -0.6880319 7.7341080 8.9423107 NA 3.5974477 -1.6877995 6.4100748 4.8429587 3.0124793 10.3578031 -0.6880319 8.8208287 10.6195289 10.0391130 5.1449355 10.1052404 14.2726111 8.7341084 4.7383085 4.1449355 10.7091833 0.3120843 -1.6877995 1.3120262 -0.1029920 12.7177999 5.6957489 8.3901943 12.8503537 10.0361310 11.5130953 12.5596002 12.4332532 8.8178551 11.4372955 13.3056453 10.8225605 10.0756709 8.7745459 0.3120843 8.0467530 11.1017809 11.366139 11.256756 7.364612 12.995531 8.740404 6.712923 8.724613 9.311339 10.208145 7.103206 5.771476 10.754469 6.651894 3.441324 11.552537 5.904501 7.830933 11.743672 10.466545 10.468127 8.101088 8.117787 12.945606 6.712923 12.945895 10.073595 10.442292 10.179322 11.290754 10.054353 10.539659 10.872376 9.394193 9.430985 8.910515 9.004511 11.977490 6.425785 11.382164 8.138592 10.509005 10.610965 7.651893 13.275752 10.086831 10.301793 13.549851 10.550448 4.093400 1.481971 10.554920 10.372064 9.991963 TCGA-AR-A256 45 1 2854 NA breast stage iia t2 n0 m0 female 2001 NA no infiltrating ductal carcinoma 0 white NA NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4.439005e-06 1.387189e-06 6.47058823529412 22.9411764705882 7.05882352941176 38.2352941176471 25.2941176470588 10.3823150 10.4095604 11.6668559 10.4479603 8.1972796 10.1287798 8.5907049 10.9701530 9.9343907 13.5047377 9.6735359 10.7834537 2.3305584 10.8878411 4.1972835 9.9650371 6.9504428 9.0712199 11.8964884 4.3091762 -1.7568184 10.9070862 8.6797950 8.7369390 11.4753545 4.4525361 1.5650122 10.3864666 10.5669826 1.2430597 7.8448545 7.4933815 11.2353137 3.4910065 9.8678789 10.6211074 9.3031038 11.0626638 9.2668378 11.1167198 1.0504669 4.1257255 14.3149857 8.5368770 8.6407579 11.2949721 10.9152878 4.0504407 -1.7568184 9.5795901 11.4037428 -0.7568184 11.3615379 4.8280476 7.4079900 5.1134463 10.7286613 12.3577205 9.8058029 11.8105643 13.5740703 6.1439505 11.0737967 10.7071314 11.4059468 11.5430069 5.1257255 12.2970094 8.0260819 3.0504320 10.0342464 9.8882915 1.2592424 5.6777112 8.8005473 10.9851823 10.5728798 10.8552609 -1.7568184 6.9979709 13.5237455 11.6972542 9.7764131 8.3051297 1.9128000 0.8486900 -0.4633400 0.5218800 -0.4669600 0.0000000 -0.9672100 0.5638300 2.3747000 -0.0725410 2.0702000 0.6967100 -0.0083005 0.0686650 0.0331270 -0.4679100 -0.5141400 0.1644500 0.5539000 -0.4733200 -0.4585400 -0.4285500 -0.4285500 0.4432500 0.3886600 0.4194900 -0.0216470 0.4505400 -0.2450900 0.0345360 0.3499000 -0.4462000 -0.4810700 -0.9808300 -0.4767000 -0.2823200 -0.4102500 0.2134500 -0.4815500 -0.3560100 -0.5236900 -0.3413800 0.9667800 0.5929400 -0.0081624 -0.4658900 -0.0083005 -0.5863700 -0.4802900 0.0331270 -0.4386400 -0.4234200 -0.2029900 -0.7899200 0.8948700 0.0593660 -0.4465200 -0.4718400 -0.4706700 -0.3278500 -0.4733200 -0.4154200 -0.0084385 -0.4789200 0.4041100 0.4310800 0.0619370 -0.4633400 -0.5323500 -0.495 -0.495 0.000 0.000 -0.296 -0.296 -0.256 -0.472 -0.450 0.000 0.000 -0.456 0.000 -0.466 0.000 0.380 0.380 0.000 0.409 0.451 0.451 -0.289 -0.474 0.000 0.000 -0.454 0.505 -0.444 -0.444 0.000 0.000 -0.410 -0.410 0.000 0.385 1.091 1.091 0.441 0.441 -0.480 -0.480 -0.495 -0.495 0.000 0.000 -0.296 -0.296 -0.256 -0.472 -0.450 0.000 0.000 -0.456 0.000 -0.466 0.000 0.380 0.380 0.000 0.409 0.451 0.451 -0.289 -0.474 0.000 0.000 -0.454 0.505 -0.444 -0.444 0.000 0.000 -0.410 -0.410 0.000 0.385 1.091 1.091 0.441 0.441 -0.480 -0.480 7.8923394 NA 3.2874723 10.3044547 11.2939524 4.9869752 10.0273093 9.9934345 7.5678489 0.2430597 12.0952228 11.5126207 3.5650122 NA 3.6693443 9.6061231 3.2430902 9.5559664 11.9918004 12.0556619 9.9097514 -1.7568184 8.0277180 10.1778801 5.1972796 9.0104403 -1.7568184 NA 11.1268723 1.0504669 5.3826361 8.8392731 10.2128298 9.4123821 11.6087224 1.8280628 9.3325339 3.7349372 9.1088166 12.1621330 7.4054751 6.0822874 -0.1720184 1.0504669 8.5616263 4.1738230 1.2430597 -0.1720184 3.6354062 2.9435276 3.6006385 10.2616314 5.8053260 11.6905542 10.3450591 10.5171704 2.9435276 8.2045330 14.1425820 8.2942922 2.3305584 2.8280425 10.5488602 2.3305584 2.0504320 2.8280425 5.4910097 11.515904 9.172342 7.888742 10.887841 10.183397 11.543579 4.309176 11.110555 8.432908 10.401378 13.901602 13.514802 9.579590 7.440300 1.828063 8.590705 11.461647 10.0747865 11.1055271 6.5514222 14.0113960 9.1841310 6.9538903 8.7715377 9.0917064 9.5170829 5.9084190 3.9155113 9.6735359 10.6396883 6.8760785 10.4089326 6.4476552 8.7291241 12.9108049 9.6028330 10.2110302 8.6619900 7.1559728 9.2949722 4.9710055 10.9228230 9.3031038 9.9837075 9.5514226 11.9762047 11.5048846 11.6996946 10.8747153 9.5745602 -0.7568184 8.9060722 6.4029541 11.4037428 1.8280628 11.3615379 6.9811757 10.2007188 10.7286613 8.6269282 14.2825166 10.9684497 10.9489318 12.4930117 10.6953247 -0.7568184 NA 11.0873969 9.6646224 9.2501108 TCGA-AR-A2LE 69 0 NA 5062 breast stage i t1 n0 m0 female 2001 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 1 5 3 4 4 1 8 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.421462e-06 2.60098e-06 10.8108108108108 79.3918918918919 1.68918918918919 7.09459459459459 1.01351351351351 11.2295384 10.2187047 11.9030685 10.4233823 7.8674820 9.5362764 10.9219300 9.7669554 10.4212838 9.8873818 11.7921425 10.3883611 -1.0028883 13.0057212 3.9040120 8.1519354 4.9971162 8.3369675 9.0346645 12.8838619 0.9971117 14.0354364 7.9337556 8.3503965 10.4144427 6.2917380 NA 8.4107456 7.8519857 2.6975514 7.1720434 6.5970305 NA 4.6975570 10.3369675 10.7499163 9.3246702 12.3210167 10.1557272 12.0999134 0.9971117 12.1342688 14.5429266 7.5757540 9.3369675 10.1115105 11.6244234 3.5820742 -1.0028883 9.2650747 11.9208164 1.5820742 11.3607047 4.9513127 5.0632052 3.6975626 10.4080987 12.2597996 10.1838508 12.2481560 12.9494037 7.5895747 10.9932379 10.6954445 11.9951790 11.7010211 5.7113627 12.7341535 12.3036065 -1.0028883 9.4698083 9.0277847 3.8054988 4.8044718 10.0578135 10.4874670 10.4657416 10.2162861 1.3190398 6.4809340 14.2358954 10.8793784 9.8323783 9.0208719 0.6503800 0.6503800 -0.0045695 -0.0163780 -0.0135400 -0.0011087 -0.0047079 -0.0047079 -0.7026200 0.0230050 -0.0047079 0.0080567 0.0080567 0.0055952 0.0055952 0.0055952 0.0000000 0.0000000 0.0025646 0.0086135 0.0148880 -0.6740700 0.0161460 0.0161460 0.0294660 0.0294660 0.0256710 0.0301690 0.0069435 0.0069435 -0.0051227 -0.0045695 0.0055529 0.0033299 -0.0011087 -0.0011087 -0.0047079 -0.0047079 -0.0047079 -0.0008316 -0.0008316 -0.7026200 0.0111210 0.0111210 0.0111210 0.0111210 0.0080567 0.0080567 0.0171240 0.0055952 0.0133530 0.0133530 0.0000000 0.0000000 0.0000000 0.0025646 0.0086135 0.0086135 0.0193630 -0.6952300 -0.6740700 0.0161460 0.0179630 0.0294660 0.0256710 0.0036076 0.0119580 0.0397610 0.0397610 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.643 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.698 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.643 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.698 0.000 0.000 0.000 0.000 0.000 8.4503881 NA 5.0845788 10.1595089 10.8797605 8.7883128 11.5853636 11.5637495 8.9561342 3.8044770 11.5818452 10.3831093 4.7784767 2.1670367 3.6975626 7.5555386 3.9513174 9.7096444 11.8845285 10.9359619 9.0153178 3.7520099 8.3257925 9.6704266 6.9914708 4.1670448 0.5820742 NA 10.5617433 5.1468629 5.5517067 8.3458456 4.9513127 9.9213511 10.6530953 3.2450392 7.6624533 -1.0028883 8.1392244 13.3214387 9.2928864 8.1745373 NA 2.3190398 9.1906428 NA 3.6975626 NA 4.9971162 5.8306407 2.8044666 10.3721569 NA 8.2065709 10.6278396 9.7326735 4.5517067 9.3926517 11.6693218 7.8643960 3.3190398 2.9040023 13.5434091 5.3190470 NA 2.5820742 NA 13.782621 4.904007 8.608142 13.005721 10.777247 10.968661 12.883862 13.917610 9.272078 11.248008 13.184933 11.927855 9.265075 7.791533 -1.002888 7.637362 12.216437 10.774372802 11.935410648 8.116058513 13.342453423 9.205351944 9.726738253 8.987221370 8.524594603 10.401274523 6.345845196 6.291737994 11.792142481 5.951312694 -0.002888279 12.068579860 6.683617862 5.351497593 12.953039782 9.977971049 10.507387140 7.516753488 8.578317964 12.451673834 5.336968862 13.336865222 9.324670215 10.051043314 9.632835656 10.300898187 9.718216733 10.233131666 10.627839627 9.779296661 -1.002888279 9.053890594 9.281178007 11.920816371 4.778476691 11.360704728 5.817295800 10.907760233 10.408098721 7.225936194 14.918168074 10.835927468 11.065223987 12.597495047 9.760329910 -0.002888279 2.804466643 11.047646419 11.121238797 10.467776402 TCGA-AR-A2LH 55 1 616 NA breast stage iii t3 n3 m0 female 2007 NA yes infiltrating lobular carcinoma 29 white not hispanic or latino NA NA 3 3 4 1 3 6 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.040392e-07 20 50 10 15 5 10.2666240 9.3864995 11.6368705 8.7867283 8.2474082 9.2436596 10.1506335 9.6451830 11.6986481 10.6289888 10.6342480 10.2247676 1.0724489 12.7110318 3.1599520 11.1542990 6.0948504 8.6816615 7.8340342 11.6123685 0.6574571 11.8864643 7.6309034 9.4786877 10.5758116 7.0554766 -0.9274140 13.9284705 10.6058125 2.3944044 7.8505600 7.0497625 -0.9274140 4.9053750 9.7607331 9.5050247 9.3227811 11.0204849 9.3977882 10.9827507 -0.9274140 9.1966041 15.1934496 6.7592637 10.6058077 10.8029529 10.3126778 5.1168762 5.1810071 8.4388052 13.8109973 -0.9274140 10.8248634 6.4388052 6.9913461 4.3204125 9.6337707 11.5444119 10.1953108 12.1238616 12.4235600 7.3671037 11.1072817 10.6279682 10.8410807 11.1764262 4.1599440 10.9619867 11.1114017 NA 10.4437149 9.1810071 3.2424043 6.0948504 10.7338155 9.5573057 9.9069539 9.6649398 2.6574342 10.8534325 13.0646245 12.8899661 9.8990312 10.0017412 0.0765660 0.0298740 -0.0879770 -0.0879770 -0.0226060 0.0444320 0.0041632 0.0041632 0.1058500 0.1058500 0.1058500 0.0059700 0.0059700 -0.0217840 -0.0217840 -0.0217840 -0.0580580 -0.0580580 -0.0922130 -0.0257560 0.1111100 -0.0922130 -0.0922130 -0.0922130 -0.0176660 -0.0176660 -0.0176660 -0.0246610 0.0765660 0.0765660 -0.0204120 -0.0879770 -0.0226060 -0.0226060 0.0444320 0.0444320 0.0041632 0.0041632 0.0041632 0.0467000 0.0467000 0.1058500 0.0418830 0.0418830 0.0418830 0.0418830 0.0059700 0.0059700 -0.0217840 -0.0217840 -0.0217840 -0.0217840 -0.0580580 -0.0580580 -0.0580580 -0.0922130 -0.0257560 -0.0257560 0.1111100 -0.0992090 -0.0922130 -0.0922130 0.1084400 -0.0176660 -0.0176660 -0.0246610 -0.0263040 -0.0221950 -0.0221950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.111 0.000 0.000 0.000 0.000 0.116 0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.111 0.000 0.000 0.000 0.000 0.116 0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.106 0.000 0.000 0.000 0.000 8.84232048 3.59604063 5.74490917 10.47496193 11.18589937 6.61032210 11.24834413 10.15327360 9.21799452 6.01499793 12.93908555 11.94121465 3.46479894 0.07244885 3.53191789 7.35325359 4.02667614 11.60556910 11.62898880 10.68489052 9.15463181 3.39440439 8.04114933 10.63329324 9.07389091 6.20176519 6.02667835 NA 11.30849694 6.64233768 7.04402684 8.02958485 8.05832461 9.91295384 10.03610134 5.39441125 9.25239177 NA 7.78328901 12.62346997 7.56032290 8.75372119 0.07244885 2.07248315 7.79699676 3.87983317 3.77292023 0.07244885 7.13857183 3.65925099 5.35788625 10.71137118 2.87984297 10.29165133 11.04546256 9.36134881 6.70183873 10.47975056 12.95455258 9.50919425 3.59604063 5.02668057 10.76335372 -0.92741395 NA NA 4.35788273 10.722803 7.196604 8.443170 12.711032 10.052622 10.559820 11.612369 10.341025 9.218415 10.316252 13.396312 11.389047 8.438805 8.764226 1.394404 6.997296 11.182966 11.328691 13.207471 5.813950 14.551220 9.281936 8.367104 8.955126 8.209474 10.178444 8.705478 7.460500 10.634248 8.544158 -0.927414 10.328102 6.853842 7.862082 12.028496 10.955508 10.545174 8.221391 9.201766 10.248032 8.020850 11.353338 9.322781 10.430035 9.635679 10.966922 10.714534 10.345113 10.619377 8.653683 9.454026 10.526633 8.452966 13.810997 9.092073 10.824863 5.853843 11.034656 9.633771 7.744979 13.905661 10.302503 10.398912 12.633890 10.769016 7.769450 2.242420 10.224134 10.003959 9.154632 TCGA-AR-A2LJ 40 0 NA 2632 breast stage iiia t3 n1 mx female 2007 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 5 4 3 6 4 4 3 6 2 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 1.040392e-07 41.6666666666667 16.6666666666667 0 25 16.6666666666667 8.8651768 8.1447444 11.0512021 6.3254440 8.9065846 8.6865289 9.7695273 9.1957433 10.9221265 11.8974672 11.8000617 9.9817645 0.7632416 16.1612017 2.0851187 11.2369070 8.6133880 7.8899055 8.1030512 12.4671049 1.7631991 13.6530379 5.0486024 10.1659256 10.1878924 3.1555226 NA 11.4968522 9.0004113 1.5705601 9.6343364 5.8924833 NA 4.0851272 8.7042488 9.4142529 8.9331262 9.7883409 8.6894973 9.7064487 3.8924882 10.8792202 14.7036525 5.9806263 10.5535498 12.4688337 9.6633133 5.3925579 0.7632416 7.3254440 10.4164942 NA 10.6000407 6.2709961 6.2226326 6.8400163 9.4133554 11.7188512 10.7820969 11.7445902 11.6717816 8.9281082 10.3283033 10.2470170 10.3115416 10.1778865 2.3481758 11.7912800 12.4897388 1.3481758 10.8618913 8.2185284 4.2550550 5.3481651 10.6787073 9.4034463 10.0247086 8.3158705 3.4636355 7.3216224 13.3210239 12.5923294 9.7751273 9.9902155 0.42906000 0.42906000 0.00221930 0.00221930 0.00374650 -0.00332430 -0.00635100 0.01056400 0.00208050 0.00208050 -0.02246900 0.00000000 0.00000000 0.00388540 3.65690000 3.65690000 0.00332990 0.00332990 0.00583090 -0.00857660 0.00555290 -0.02862800 3.65690000 0.34388000 -0.01739100 -0.01739100 -0.01739100 -0.00166290 -0.00443120 -0.00443120 -0.00857660 0.00221930 -0.03204100 0.00374650 -0.00332430 -0.00332430 -0.01376400 0.01056400 0.00750000 -0.00774820 -0.00774820 0.00208050 0.01084200 0.01084200 0.01084200 0.00777830 0.00000000 0.00000000 -0.00044332 0.00819590 -0.43594000 -0.44458000 0.00332990 0.00332990 0.00332990 0.00583090 -0.00857660 -0.00857660 0.00555290 -0.55939000 -0.44588000 -0.01780300 0.00430210 -0.01739100 -0.01739100 -0.00166290 0.00346870 -0.00332430 -0.00332430 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.457 -0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.429 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.457 -0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.429 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5264136 -0.2368434 5.8821417 11.9118368 11.5390173 8.1404985 12.0642687 6.7531913 9.9907751 4.5180882 12.7284444 12.2031698 3.3481616 4.1894688 1.5705601 7.4497017 5.4911219 10.7649613 10.5076147 9.9129484 9.3806686 3.4070536 7.9205482 11.0695478 7.8238971 8.2061445 -1.2368434 NA 9.8691098 6.6273880 6.9381270 7.5445611 7.5379887 12.0108737 9.4338575 3.9726559 9.9671610 NA 6.7232036 13.5102403 7.8873224 8.6700918 0.7632416 0.7632416 8.1185523 NA 4.3177888 1.5705601 6.0111288 6.7967340 4.3177888 11.0410698 3.3481616 7.7632011 10.6285479 9.5197575 5.6335649 9.8386805 11.8551325 11.2251923 4.1207501 5.8506644 10.4038981 NA NA -0.2368434 3.0851357 15.852436 5.962873 8.208216 16.161202 9.904031 10.745482 12.467105 10.886999 12.028599 9.804860 12.916357 11.173918 7.325444 9.491122 2.463649 7.989614 9.305266 11.3013902 12.4602774 4.4636421 13.3742814 8.6164952 7.1207532 8.7159424 7.4705605 10.0046423 8.0555227 6.9281085 11.8000617 8.8034909 3.2867629 9.3934683 8.4016373 6.6379985 10.7372573 10.2857828 10.0004112 8.5608628 10.1333438 6.4566879 6.3779115 11.2763515 8.9331262 10.7515309 10.6674596 9.8506641 9.9817645 9.8075955 10.3700691 5.9823707 -0.2368434 9.2924268 5.7744286 10.4164942 7.0439722 10.6000407 6.8612333 11.1786790 9.4133554 6.5576169 14.7020457 10.3802095 9.9829748 12.3975586 11.3275890 4.3177888 -1.2368434 9.1414961 8.5576172 9.0428118 TCGA-AR-A2LK 62 1 1649 NA breast stage iii t3 n2 m0 female 2007 NA yes infiltrating lobular carcinoma 5 white not hispanic or latino NA NA 1 2 2 2 1 1 1 8 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 3.467973e-07 34.2857142857143 17.1428571428571 0 25.7142857142857 22.8571428571429 11.1287489 11.2160391 11.9594717 9.7960213 9.2323346 8.2388743 9.8276981 9.9487633 8.6235073 12.8853380 12.0473679 10.9898362 3.7397509 12.4549352 4.6378710 8.8931899 4.1872135 8.9606811 9.0924987 13.3541283 4.3026919 13.8211760 3.7721707 9.4746597 11.9701011 4.0082448 0.6022668 11.1460567 11.6690115 1.8652854 7.6897122 7.0014206 -1.7197563 4.5091384 10.2253995 10.9503138 10.0860653 11.7348778 10.2810258 11.5301757 0.6022668 11.8744128 14.7331258 8.8429933 9.2279583 11.9704286 12.2578698 3.6022549 NA 9.8922685 12.0828379 -0.7197563 10.7671565 5.0616812 6.4300695 5.8727795 10.3427050 12.0903910 10.5494482 11.6563112 12.7206716 8.3664577 11.2595680 11.0076804 11.2992171 11.4139454 5.7960214 11.9258673 11.7876206 NA 10.6926267 10.1724848 2.3686287 6.1005005 10.9885433 10.1736230 10.4973705 10.9549552 6.3247152 5.4096048 12.2432175 11.2097648 10.5332825 9.0141843 0.851060 0.851060 0.076935 0.048688 0.072253 0.752610 0.088258 0.088258 0.603770 1.501300 1.513700 -0.317100 -0.313190 -0.010922 3.656900 -0.483650 0.096670 0.096670 -0.379880 0.460240 -0.355900 0.482680 0.482680 0.482680 -0.298630 -0.298630 -0.298630 0.569880 -0.346530 -0.346530 -0.350550 0.080168 0.072253 0.072253 0.752610 0.752610 0.088258 0.088258 0.088258 -0.381900 -0.385820 -0.499020 -0.352590 -0.352590 -0.352590 -0.352590 -0.313190 -0.313190 -0.010922 -0.455760 -0.483650 -0.483650 0.096670 0.096670 0.096670 -0.379880 0.460240 0.460240 -0.355900 -0.354070 -0.223420 0.482680 0.094346 -0.298630 -0.298630 0.569880 -0.340560 -0.297920 -0.297920 -0.317 -0.317 0.000 -0.473 0.000 0.000 -0.380 0.460 -0.356 0.879 -0.354 0.259 0.483 0.000 0.000 -0.299 -0.299 -0.347 0.505 0.570 0.570 -0.341 -0.298 -0.347 -0.347 0.000 0.000 0.000 0.000 0.753 0.753 0.000 0.000 -0.386 -0.386 0.105 1.514 -0.353 -0.353 0.000 0.000 -0.317 -0.317 0.000 -0.473 0.000 0.000 -0.380 0.460 -0.356 0.879 -0.354 0.259 0.483 0.000 0.000 -0.299 -0.299 -0.347 0.505 0.570 0.570 -0.341 -0.298 -0.347 -0.347 0.000 0.000 0.000 0.000 0.753 0.753 0.000 0.000 -0.386 -0.386 0.105 1.514 -0.353 -0.353 0.000 0.000 8.1036886 -1.7197563 6.4848922 10.0005657 11.3662918 6.1367471 11.2385117 9.2227848 8.1130847 -1.7197563 10.7749271 11.8694986 1.4502215 3.6022549 3.2803179 8.6865264 3.2345166 9.4614737 11.0546968 11.2270451 9.0526360 5.5749431 8.4775381 9.6212843 6.2971290 5.4994888 1.0876665 NA 10.8772100 7.0682237 7.3888456 8.1857085 8.5377092 10.6787793 10.5109424 1.7397617 9.0518109 NA 6.7479271 12.2139200 8.8272160 6.4249792 -1.7197563 8.0184139 8.8895003 NA 4.1132087 NA 4.6378710 6.5272049 2.4502479 10.6550894 -1.7197563 8.2301482 10.1755181 9.8194803 4.0616812 9.2006743 11.1963876 8.6833336 4.1629673 2.9807565 12.8840058 1.8652854 NA 0.6022668 1.0876665 16.168949 6.193210 8.741801 12.454935 9.572643 10.936523 13.354128 11.921809 8.682268 11.301128 13.135093 11.908311 9.892269 10.020946 2.672629 8.001421 11.750345 10.8832523 12.0361480 8.2957363 12.8427422 8.5424163 4.6897129 9.2817298 10.3839372 10.3981918 6.8802349 4.0876750 12.0473679 6.5471074 1.0876665 11.3240324 6.0418738 8.4966916 10.6721021 9.4964612 10.8818602 10.4379842 8.6918325 13.2437595 5.0747366 13.0861158 10.0860653 10.6030947 9.6340198 11.7198927 9.8454236 10.4719977 10.4446000 9.1637284 -1.7197563 9.1359842 7.6285629 12.0828379 5.0217906 10.7671565 7.7601018 10.0551086 10.3427050 7.7701696 13.6305701 10.1289445 9.7631295 12.8862639 10.2915488 -0.7197563 3.8652854 10.5858133 11.0314471 9.4775381 TCGA-AR-A2LL 70 0 NA 2012 breast stage iib t3 n0 m0 female 2007 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 2 3 2 4 1 1 8 6 2 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 1.040392e-07 37.037037037037 11.1111111111111 3.7037037037037 25.9259259259259 22.2222222222222 10.2958145 9.8849144 11.6149224 9.2357464 9.5279991 8.8677359 10.2937414 9.0088838 8.5272936 9.4696933 10.8755193 10.4139028 2.6175806 14.0637783 4.1150749 10.0847029 5.7000401 8.5881056 9.0507327 13.4110367 2.7780403 13.9725716 4.4843122 9.2080539 11.5612983 4.8876666 0.1150332 11.6030003 9.5244675 1.9895387 7.6490549 6.5413414 NA 3.3880931 9.4564101 10.4081650 9.1820626 10.6804960 9.9143581 11.4158104 -1.4699293 12.1119031 14.3429932 7.7317480 9.5350368 11.2563322 12.0985452 4.4843122 NA 8.9267188 10.8537318 NA 9.9495476 5.0058491 6.5413414 6.5908101 10.3641899 11.8036182 10.7303997 11.8632694 12.8248066 8.7517010 11.1328129 10.6680178 11.7051957 10.6817649 5.1300289 12.3863450 12.2640826 -1.4699293 10.5583654 9.8677359 3.6676197 5.5073951 10.0663613 9.5510940 10.9487573 10.9389745 2.1150665 6.3502921 12.6669450 12.4803054 10.0526956 9.0078722 1.25920000 1.25920000 0.16640000 0.15084000 0.17106000 0.25809000 0.17935000 0.17935000 -0.54229000 0.84929000 2.28150000 0.81845000 3.65690000 -0.43105000 0.50116000 0.05850900 -0.10788000 -0.10788000 -0.67085000 -0.03081300 -0.08572200 1.23730000 1.23730000 0.52415000 0.00000000 0.00000000 0.00000000 0.38006000 -0.41080000 -0.44491000 -0.04061600 0.15084000 0.20916000 0.17106000 0.25809000 0.25809000 0.17935000 0.17935000 0.15906000 -0.04617700 -0.08638600 -0.54229000 0.09318500 0.09318500 3.65690000 -0.56157000 -0.73108000 -0.75323000 -0.43105000 -0.05334100 -0.77897000 -0.77184000 -0.10788000 -0.10788000 -0.10788000 -0.05563400 -0.03081300 -0.03081300 -0.08572200 -0.74260000 -0.73886000 1.23730000 -0.06155500 0.00000000 0.00000000 0.38006000 -0.00013862 -0.05657700 -0.05740300 0.061 -0.689 -0.431 -0.431 -0.108 -0.108 -0.150 0.000 0.000 0.508 -0.743 0.519 1.237 0.000 0.000 0.000 0.000 -0.411 1.169 0.380 0.380 0.000 0.000 0.000 0.000 0.151 0.151 0.171 0.171 0.258 0.258 0.179 0.179 0.000 0.000 1.667 2.209 -0.568 -0.568 0.000 0.000 0.061 -0.689 -0.431 -0.431 -0.108 -0.108 -0.150 0.000 0.000 0.508 -0.743 0.519 1.237 0.000 0.000 0.000 0.000 -0.411 1.169 0.380 0.380 0.000 0.000 0.000 0.000 0.151 0.151 0.171 0.171 0.258 0.258 0.179 0.179 0.000 0.000 1.667 2.209 -0.568 -0.568 0.000 0.000 8.3614214 -0.4699293 5.2982991 10.9253803 11.9873666 8.1132155 11.8489393 7.5248919 8.7440568 NA 11.6962771 11.7066690 2.7000401 3.1150832 4.5962017 7.5413414 3.0536674 9.2631293 11.3799100 11.2404900 9.6664644 9.3237173 8.0438415 10.2995387 6.2305547 4.7199391 -1.4699293 NA 10.5500522 9.0653895 5.6490549 8.8441308 6.5853967 11.4392421 10.7078450 1.7000401 9.1318847 -1.4699293 7.5441345 12.2799835 9.4667519 6.5469222 0.1150332 7.2916653 8.5840399 2.3374828 2.9224262 NA 4.0219682 7.4912454 2.1150665 10.1789210 NA 7.7992408 10.4667520 9.7969006 3.2850026 9.7267161 11.8095795 10.0590564 3.4843057 2.9895387 12.0873384 2.1150665 NA 0.1150332 0.5300707 13.978908 5.541341 8.527294 14.063778 9.297471 10.454927 13.411037 12.549010 9.307369 10.547270 12.985120 11.341288 8.926719 9.678591 2.617581 7.593509 11.445246 10.5009390 11.7132841 8.1374441 13.2088231 8.4142844 5.1883257 9.0209649 9.8126234 9.6896259 5.9895455 4.9224310 10.8755193 6.4370046 0.1150332 10.7577299 6.4958982 6.8847603 10.6255111 9.9024350 10.1963380 9.4784813 8.9384437 12.1502193 5.3630028 12.0814101 9.1820626 10.2309872 10.5607811 12.2971605 9.0259689 10.9328596 9.8497862 8.1337402 NA 8.6742241 6.2316628 10.8537318 5.6899840 9.9495476 6.4127578 10.2527722 10.3641899 7.4784817 13.2759984 9.8062385 9.6548816 13.0412490 10.7146795 3.7780403 NA 10.6208880 10.2131086 9.3566626 TCGA-AR-A2LM 49 0 NA 1935 breast stage ii t1 n1 m0 female 2007 NA no infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 5 4 3 3 3 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.040392e-07 7.69230769230769 7.69230769230769 7.69230769230769 46.1538461538462 30.7692307692308 10.8531583 10.3565798 12.4700463 10.2466733 8.1198277 9.2589087 10.5714897 9.9172266 10.2182053 9.9486689 11.0012395 10.6327820 4.6236269 13.4553841 4.5317058 9.6910450 7.1906682 8.7058421 10.1576059 12.9507779 2.8073343 13.6122418 5.9632568 8.8866989 10.7821279 4.9131336 -1.7164338 9.6772642 8.5340756 4.8073395 7.8911075 8.2681958 -0.1313132 5.1039550 10.4433333 13.3098252 9.4461685 12.8836320 10.4962737 12.0473009 12.4111268 11.5490993 15.3438821 8.9698139 10.0544411 11.3659263 12.1012606 5.0781914 2.8687460 9.7478125 11.6446244 -1.7164338 11.5786852 5.4537019 6.2724618 4.9980240 10.4871252 11.9217606 10.7658289 13.1358678 13.2358815 8.6291825 11.3454860 11.1117590 11.7272389 11.5151485 5.7836243 13.0061579 13.0592332 0.8687658 10.2104439 9.0218694 4.1001198 5.4436497 10.1876591 10.7228290 10.0614436 9.9548760 3.5691751 9.7736252 14.8212384 13.1966666 10.4809940 10.1405918 0.96658000 0.96658000 -0.00581400 -0.00581400 -0.00622860 -0.00152430 -0.00761010 -0.00761010 0.00027728 0.00027728 0.00027728 -0.00138580 -0.00138580 0.00527490 0.00527490 0.00527490 -0.55607000 -0.02179100 0.01782400 -0.00429290 0.00277450 3.65690000 0.00791750 0.00791750 0.02370600 0.02370600 0.02370600 0.01712400 0.00097064 0.00097064 0.00000000 -0.00581400 -0.00622860 -0.00622860 -0.00152430 -0.00152430 -0.00761010 -0.00761010 -0.00761010 0.01698500 0.01698500 0.00027728 0.00058247 0.00058247 0.00058247 0.02104300 -0.00138580 -0.00138580 0.00527490 0.00527490 -0.49861000 0.01684500 -0.55607000 -0.00360110 -0.00360110 -0.02054900 -0.00429290 -0.00429290 0.00277450 -0.55246000 -0.53916000 0.00791750 0.01405100 0.02370600 0.02370600 0.01712400 0.00513590 0.01670500 0.01670500 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.492 -0.552 -0.539 0.000 0.000 0.000 0.000 0.000 0.000 0.966 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.492 -0.552 -0.539 0.000 0.000 0.000 0.000 0.000 0.000 0.966 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.0618545 -0.7161967 5.6846561 10.8806659 10.8922631 7.4367215 11.8613241 9.5886076 8.3308604 4.2610569 11.9453327 10.7566889 2.6057077 3.4130660 4.3712382 8.6280733 4.0386644 10.4953614 11.3757085 11.3515477 9.2063617 3.0386644 8.2204151 10.0411673 6.8383656 5.1039550 1.7432133 0.6056840 11.2154382 6.6369247 7.4385956 8.1572216 6.8345241 10.3673298 10.7367906 5.4537019 8.6225138 -0.7161967 8.8920321 12.6840564 8.7483230 6.6191679 NA 0.8687658 8.4461685 -0.7161967 3.9276310 -0.1313132 5.8383669 6.1583895 4.2379766 9.9185884 0.2838033 9.8934177 10.2452269 9.6958178 4.6413322 9.4698915 11.9843254 8.3281714 0.6056840 3.9842156 10.9883294 1.2838033 NA 2.0911243 0.2838033 12.4415190 4.6236269 8.1119139 13.4553841 9.8004622 10.4471125 12.9507779 12.7013002 9.3672566 10.8400438 13.6702797 10.4962737 9.7478125 9.4297095 -0.7161967 7.1785951 11.5963767 11.5408704 11.6669415 7.7287919 13.4858992 9.0781932 6.5966609 9.3103008 8.1510561 10.7064833 7.2495620 6.0184873 11.0012395 7.2581919 4.2837736 11.6132934 8.2233564 6.2922627 12.9967878 10.6760947 10.6752894 8.4036652 7.9473354 13.5974044 5.5029447 11.8023665 9.4461685 10.1103258 9.6658608 11.5229282 10.1622114 10.7047901 10.5564071 9.1951692 0.2838033 8.8829927 9.1487992 11.6446244 5.2262927 11.5786852 8.6236273 10.9115392 10.4871252 7.7756307 13.7841514 9.7173627 9.9911365 13.1121617 11.2137753 -0.1313132 1.0911243 10.8614421 11.0033800 10.0810334 TCGA-AR-A2LN 65 0 NA 1161 breast stage iia t2 n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 4 3 6 3 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 4.161568e-07 21.2121212121212 51.5151515151515 0 15.1515151515152 12.1212121212121 10.8757612 10.3497948 11.8706271 10.0117886 8.4415200 9.1747876 10.9494414 9.6968394 10.6511605 11.0655741 11.7585925 10.4467043 6.4484286 12.7116302 4.4392109 9.6436555 6.8680533 8.9351674 10.2746934 12.6502869 3.0607046 13.9431884 8.0606981 9.4601085 10.2412704 4.6132370 NA 11.7091109 7.1368015 5.4757367 8.6987720 8.2882340 0.1538053 5.1982034 10.4363169 9.9906469 10.2662471 12.2549626 10.3766025 11.9209575 4.7387678 10.2610246 15.0811689 8.2461420 10.4432501 11.5613409 11.3981714 7.4392100 1.9611788 9.6234493 12.2822853 NA 11.1025398 5.8680521 6.4847246 5.1538094 10.2629853 11.8424950 10.2623320 12.3827766 13.0452116 8.1566226 10.5525512 10.5443098 11.4123736 11.6032142 5.1761751 11.6727066 10.2077334 1.7387678 10.4598693 9.0071173 4.9632198 5.5113605 10.4246869 10.2863073 10.3796175 9.6019240 4.6773673 8.9384425 13.9372663 13.2416848 9.7740275 9.6152870 0.3605100 0.3605100 0.0048579 -0.0076480 -0.0070576 -0.0008316 -0.0060904 -0.0060904 0.0000000 0.0000000 0.0000000 0.0052749 0.0052749 0.0036076 0.0036076 0.0036076 -0.0011087 3.0089000 -0.0049844 0.0013868 0.0151680 0.0175440 0.0175440 0.0175440 0.0140510 0.0140510 0.0140510 0.0181030 0.0093098 0.0093098 -0.0031859 0.0048579 -0.0070576 -0.0070576 -0.0008316 -0.0008316 -0.0060904 -0.0060904 -0.0060904 -0.0011087 -0.0070420 0.0000000 0.0058309 0.0058309 0.0058309 0.0058309 0.0052749 0.0125160 0.0151680 0.0036076 0.0036076 0.0036076 -0.0011087 -0.3757200 -0.3716600 -0.0049844 0.0013868 0.0013868 0.0151680 -0.3725600 0.0175440 0.0175440 -0.3947500 0.0140510 0.0140510 0.0181030 0.0038854 0.0373590 0.0373590 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.373 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.373 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.351 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.9186790 1.4757594 5.8680521 10.7708158 10.8204755 8.3247341 11.2850215 10.2193853 8.4746080 6.6050187 11.7167655 11.1265756 4.1080058 7.2036563 5.3632622 8.2959145 4.4017328 10.7712750 11.4377641 10.4472793 8.8680530 6.8403084 7.6695073 9.7527906 7.3386829 8.4064729 -0.8460650 NA 11.6224316 8.2172026 7.7831639 8.0395042 7.5025359 10.7570212 10.4316761 5.7236623 8.1622362 0.1538053 9.2505227 13.0665098 9.0666968 8.0637008 NA 2.6132487 7.7868028 2.6132487 4.3632622 0.1538053 5.6616014 7.1912448 3.6132370 9.8111261 NA 9.8723404 9.9449704 9.1720079 5.5631978 9.9787664 11.8512096 9.4824825 2.4757334 3.0607046 11.4484284 -0.8460650 NA 3.5461289 2.1538053 12.558638 3.854245 8.045591 12.711630 10.419253 9.886823 12.650287 12.525856 9.181409 10.994979 14.044167 11.933937 9.623449 8.546125 1.738768 7.801266 11.737125 11.3277970 11.7881649 8.5353504 13.6062393 9.1733983 6.6132399 8.4392096 7.4530154 10.6246800 7.6173323 7.4064729 11.7585925 7.1761751 4.6132370 11.5482703 7.1310873 5.6875255 11.6697538 10.3577673 10.4592993 7.7236630 8.2172026 12.6578817 6.9803555 12.9271405 10.2662471 10.3355811 9.5244951 11.6890830 10.7420537 9.7611380 10.6861635 9.3850287 2.8542550 9.2444625 8.4364559 12.2822853 7.6132392 11.1025398 8.0933869 10.7653904 10.2629853 7.5157511 14.1524421 9.9835304 10.5557538 12.7948433 10.4919868 3.2412758 0.7388111 10.5684929 10.3910176 10.0911815 TCGA-AR-A2LO 46 0 NA 1198 breast stage iib t2 n1 m0 female 2010 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 1 3 4 3 3 4 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 3.467973e-08 27.2727272727273 9.09090909090909 18.1818181818182 18.1818181818182 27.2727272727273 10.41269982 10.03592655 11.51574640 9.99802466 8.31254266 9.26395458 9.82583348 9.50940607 10.35841923 11.02778673 12.15622788 10.39023851 3.79363582 12.92024350 3.68260700 9.82909558 6.36966365 9.07492068 9.06803444 11.80817176 3.03875222 13.30252979 6.55444764 9.29495588 10.91718125 7.02743165 0.03871711 10.88226781 8.49817865 4.03874344 8.74091980 7.84931877 2.49817426 5.41378700 9.77006621 9.98492239 10.18658796 11.42918483 9.66445600 11.58250397 3.03875222 10.48324443 14.73277846 8.27119221 10.10341581 11.64051790 11.39602422 5.24820084 3.43106128 9.21492036 12.02049276 NA 10.31195988 5.96948438 6.89672837 5.08314102 10.33852748 12.11205190 10.18276802 12.55801478 12.81723497 8.22362237 10.89439429 10.83250081 11.29495583 11.28578452 5.43106463 11.36882367 11.67786166 -0.96128289 10.26274884 9.07629400 4.92456550 5.72524763 11.32703644 10.29966663 10.58949386 9.78945409 3.43106128 9.80195954 13.34309843 12.19609405 10.11154964 9.75299255 0.43294000 0.43294000 -0.12797000 0.00000000 -0.15452000 0.00249690 0.00208050 -0.30210000 0.20015000 0.20015000 0.20015000 0.02174400 -0.29768000 -0.15656000 -0.15656000 -0.15656000 0.00277450 0.00277450 -0.00332430 -0.00470790 0.00833510 0.00569190 0.00569190 0.00569190 -0.00041585 -0.00041585 -0.00041585 0.71980000 -0.28632000 -0.29508000 -0.00138580 -0.12797000 -0.15452000 -0.00678130 0.00249690 0.00249690 0.00208050 0.00208050 -0.29284000 0.00027728 0.22360000 -0.30298000 0.00416320 0.00416320 0.00416320 0.00416320 -0.29615000 -0.29296000 -0.15656000 -0.15656000 -0.15656000 -0.30463000 0.00277450 0.00277450 0.00277450 -0.00332430 0.00708260 0.00708260 0.00833510 -0.29213000 0.00569190 0.00569190 -0.00470790 -0.00041585 -0.00041585 -0.00387790 0.00597000 -0.28940000 -0.28940000 -0.298 -0.298 -0.157 -0.157 0.000 0.000 0.000 0.000 0.000 0.288 -0.004 0.000 0.000 0.000 0.000 0.000 0.000 -0.295 0.138 0.000 0.000 0.000 -0.289 0.000 0.000 -0.128 0.000 -0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.224 0.000 0.200 0.000 0.000 -0.288 -0.139 -0.298 -0.298 -0.157 -0.157 0.000 0.000 0.000 0.000 0.000 0.288 -0.004 0.000 0.000 0.000 0.000 0.000 0.000 -0.295 0.138 0.000 0.000 0.000 -0.289 0.000 0.000 -0.128 0.000 -0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.224 0.000 0.200 0.000 0.000 -0.288 -0.139 8.09673887 -0.96128289 5.76666671 10.39629909 11.24880959 6.68368523 10.87755708 9.44393107 8.50327240 3.12621300 11.49433120 11.36927469 3.94563579 2.20867332 4.03874344 8.50022644 4.28667419 10.61286758 11.13875234 10.53260256 9.37525365 2.20867332 8.34935997 9.99512323 8.51852727 6.75299205 0.03871711 NA 10.52004198 7.48995791 7.18340513 8.57012856 8.53060024 11.16296540 10.22548040 5.28667419 9.35049548 -0.96128289 8.12355550 12.49625626 9.91986100 7.68260349 0.62367961 3.79363582 8.24820037 0.03871711 4.79363582 -0.96128289 6.90911184 3.13129315 4.76666936 10.45290384 2.49817426 9.81435735 10.43588691 9.82664969 5.94563813 10.09402951 12.41717746 8.93810403 5.14727006 4.89672716 12.50507854 2.73917843 -0.96128289 0.62367961 1.62372642 13.200850 5.623709 8.142035 12.920243 10.159873 10.481691 11.808172 12.438693 9.211175 10.991488 12.984374 12.565246 9.214920 8.443888 1.360701 7.638660 11.693383 11.4417592 12.1656129 6.9456381 13.2089054 8.5971680 8.0527675 9.2359637 9.2211414 10.3636927 8.2457614 7.4050691 12.1562279 6.0831410 4.6534556 11.3134164 7.3379554 7.9017871 11.7514890 10.6589669 10.2316563 9.2099239 8.2723666 12.2019250 7.5063528 11.5592627 10.1865880 10.7000799 10.0217407 11.3087504 10.8617162 10.1518381 10.9098823 8.8151802 -0.9612829 9.3091359 7.4469493 12.0204928 7.8461021 10.3119599 6.2285724 11.0113680 10.3385275 7.6789923 13.8005030 9.5435661 10.0443717 12.5309759 10.9091118 5.0387478 -0.9612829 10.2086721 10.2813258 10.3142897 TCGA-AR-A2LQ 59 0 NA 1233 breast stage iib t3 n0 m0 female 2010 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 4 3 3 3 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 3.467973e-08 25 0 0 50 25 10.5170555 10.3150991 11.3661272 9.7657346 7.9490417 8.9572158 10.4980388 9.6925503 10.9643302 11.2029967 10.8783451 10.3879597 2.6050913 13.3405133 4.1900538 10.8350155 6.7311968 9.1055463 10.4384641 11.9060559 2.8115327 11.3816470 7.5045608 9.1195131 10.0795734 6.8588439 NA 9.0287691 9.2027103 6.1525749 8.6941813 8.2731541 0.9046575 6.5841282 10.4360292 10.6929582 9.5054898 11.0826900 10.1807721 12.0630996 11.5525558 8.8100346 15.3611626 8.5330567 9.9827985 11.1122722 11.5082740 5.4124428 3.9490399 9.8797791 12.9858815 NA 11.8377851 6.5412717 5.7501375 5.9046479 10.4664130 11.4469541 10.0248856 12.6675488 12.6230736 8.2599988 11.0767626 10.6514853 11.1787346 11.5068826 5.4592382 12.0558228 10.3980028 3.0745739 10.3439592 9.1796081 3.6084071 6.3392764 10.2175306 9.9088681 10.1364689 9.7469981 4.4896072 8.9854651 13.8423434 12.8218333 9.6958106 9.8182851 0.14102000 0.14102000 0.03340800 0.03340800 0.00097064 -0.00263220 0.00249690 0.00050552 -0.00263220 -0.00263220 -0.00263220 0.00000000 0.00000000 0.00097064 0.00097064 0.00097064 -0.01560400 -0.01560400 -0.00097017 0.00235810 -0.00207840 -0.03026700 -0.03026700 -0.03026700 0.11638000 0.11638000 0.11638000 -0.00041585 -0.03544800 0.14102000 -0.00995650 0.03340800 0.00097064 0.00097064 -0.00263220 -0.00263220 0.00249690 0.00050552 0.00050552 -0.02314800 0.00166420 0.00277450 -0.00942310 -0.00470790 -0.00470790 -0.00470790 0.00000000 0.00000000 0.00097064 0.00097064 0.00097064 0.00097064 -0.01560400 -0.01560400 -0.01560400 -0.00097017 0.00235810 0.00235810 -0.00207840 -0.15029000 -0.03026700 -0.03026700 0.00291330 0.11638000 0.11638000 -0.00041585 -0.00166290 -0.00263220 -0.00386910 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.116 0.141 0.141 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.116 0.141 0.141 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.679435 4.114100 7.157314 10.451060 11.056933 6.598971 11.404743 10.050007 8.483964 3.296971 14.159418 11.569702 3.364082 3.152573 4.548504 8.074573 3.858846 10.332484 11.506883 10.366127 8.625747 4.904648 7.562859 10.017739 7.562859 9.149012 3.152573 -1.095420 11.594427 7.625747 8.013172 8.468797 7.351731 9.738937 10.300717 5.591147 8.196969 -1.095420 8.884787 12.995918 8.180772 8.620610 NA 4.519359 7.759516 4.226578 5.927015 NA 4.632571 5.282640 4.519359 10.268235 1.489594 10.356889 10.244498 9.714416 6.396500 10.090762 11.509433 9.573533 1.226570 3.949040 10.515211 NA -1.095420 1.489594 3.296971 11.769414 5.858844 8.343439 13.340513 10.171434 10.757957 11.906056 11.077388 8.885444 10.866459 13.772071 11.536507 9.879779 8.630866 -1.095420 7.064519 11.966188 11.63320600 11.99542177 6.59813441 13.80211411 9.02747561 5.76262787 8.76418258 7.67283193 10.11703460 6.55569961 6.72482623 10.87834509 7.18541861 2.90463823 11.07269296 6.47450256 5.78912409 13.47343514 10.61932249 10.79984426 8.85009149 8.48773032 11.60811877 6.65284067 10.69481291 9.50548984 10.05057992 9.63171728 11.05566428 10.62232413 10.30659388 10.61631469 9.18193515 0.90465750 9.64871619 7.62841127 12.98588147 8.94493749 11.83778508 9.84569531 10.61502365 10.46641300 7.52303339 14.09574434 9.90605585 10.72043127 12.91088611 11.08424581 1.22657018 -0.09541957 10.38997393 10.65451717 10.07206586 TCGA-AR-A2LR 49 0 NA 1742 breast stage i t1 n0 m0 female 2010 NA no metaplastic carcinoma 0 white not hispanic or latino NA NA 4 4 5 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 1.352509e-06 4.508365e-07 25 13.4615384615385 5.76923076923077 46.1538461538462 9.61538461538462 9.6956826 9.8425240 12.1079723 9.8147938 8.7633342 7.1174613 8.7552518 10.7729736 10.2001690 11.4149712 10.8531656 10.8783153 0.5425057 12.0750711 3.2795159 9.9951372 6.8524084 9.3380513 10.0984201 5.5575020 NA 6.9743985 9.2453026 9.0087992 10.4180462 7.5236443 -1.0424568 11.7633342 11.5633013 5.4653836 7.2149777 9.2126189 0.5425057 4.7904801 9.8069953 10.8716017 9.2567984 8.7633342 9.4333238 11.1758508 2.1275012 8.6545580 14.6706277 11.2480700 11.3415456 11.7366940 11.0064177 9.4180461 3.1275177 9.0608780 10.6131210 NA 9.6122262 5.6300152 5.4967499 5.0019823 8.9896360 12.6152437 9.7920613 12.2112901 12.7359755 6.7967937 10.2653604 10.2868316 11.2208595 11.3074244 4.1670448 11.7657501 10.0026674 3.9575896 9.7024241 9.9434322 7.1995261 6.0661150 8.6423388 10.7315537 10.3429135 9.2220329 7.0236790 8.5942149 12.4624093 11.0313971 10.0984201 11.6357503 3.1519000 0.5839900 0.5786200 0.5441800 0.5888300 1.1720000 1.1455000 0.5501800 -0.7057600 3.6569000 3.6569000 1.0789000 -0.6303600 0.5362600 0.7461300 0.7461300 0.5491200 3.6569000 1.2237000 -0.0598070 0.5182100 0.5060200 -0.0774780 0.5020300 0.4216700 1.4393000 1.3320000 0.5978200 -0.0377620 -0.0567120 -0.0472600 -0.0186150 -0.0366740 -0.7237600 -0.7155100 -0.1003900 0.6211500 0.5501800 0.0056919 -0.0491540 0.5859600 -0.7274100 -0.0418380 -0.0365380 -0.6726900 -0.0313590 -0.6303600 -0.6409500 0.5362600 0.7461300 -0.0169790 -0.0169790 1.6369000 -0.0372180 -0.0567120 -0.0677260 -0.0472600 -0.0445510 -0.6860600 -0.0438730 -0.0294480 -0.0774780 -0.6996500 -0.7565100 0.4295700 -0.0156040 0.5371300 0.5730900 0.5730900 -0.158 -0.622 0.493 0.000 0.549 0.000 0.515 0.000 -0.686 -0.616 0.000 0.000 0.000 0.000 -0.666 0.467 0.467 0.586 0.586 0.000 0.598 0.614 0.573 0.000 0.000 0.000 0.000 0.000 0.000 1.172 0.000 1.167 1.167 0.570 0.570 2.959 3.657 0.000 0.000 0.711 -0.165 -0.158 -0.622 0.493 0.000 0.549 0.000 0.515 0.000 -0.686 -0.616 0.000 0.000 0.000 0.000 -0.666 0.467 0.467 0.586 0.586 0.000 0.598 0.614 0.573 0.000 0.000 0.000 0.000 0.000 0.000 1.172 0.000 1.167 1.167 0.570 0.570 2.959 3.657 0.000 0.000 0.711 -0.165 8.6086418 6.6229260 7.0128726 10.0582526 11.2758506 5.6876878 9.6588968 10.0300244 9.2668961 4.0019823 11.6414622 10.4078788 7.0128726 NA 5.0236812 11.2211529 3.6014469 9.6273612 11.5883125 12.2077406 8.9978800 2.6580286 8.7340233 9.2918637 6.1073385 8.0687262 -1.0424568 4.9348703 11.0480336 3.1275177 8.0739343 8.8838862 10.2789548 10.3695090 12.2202724 3.6580286 10.1306428 7.0661150 8.7536299 13.4652611 7.8124584 10.0128727 1.2795307 5.3499066 8.2613710 4.5425552 7.1621617 0.9576175 8.8448109 3.4830289 4.3499101 11.5491126 -0.0424568 9.3859504 11.4131744 10.1572627 5.7389488 9.5704588 12.1176193 9.9469848 2.8644734 2.7649406 9.4403983 2.8644734 5.4653836 4.1670448 8.9575902 11.731438 9.310737 8.519833 12.075071 10.398460 10.523644 5.557502 11.936301 9.450445 11.290186 13.784288 12.049026 9.060878 8.249912 6.306319 7.834107 10.194800 11.523882 12.561217 4.167045 14.182832 8.001985 8.323913 9.936301 9.287387 10.469728 5.815570 8.055622 10.853166 9.430281 8.195995 10.911787 9.664086 8.740785 12.468107 9.754441 10.123753 8.299421 9.541613 9.886109 6.745493 11.010056 9.256798 10.229637 10.306318 10.668397 11.603924 8.960405 10.590131 9.295212 2.764941 9.080573 8.824915 10.613121 4.934870 9.612226 8.838704 11.027426 8.989636 8.408801 14.738899 10.198978 10.289627 12.588312 10.495779 2.542555 1.279531 11.148032 9.674410 9.619368 TCGA-AR-A5QM 62 0 NA 2231 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 2 4 3 6 4 3 3 2 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.387189e-07 32 4 4 36 24 8.9501071 9.5467093 11.3599409 8.5346363 8.3716225 9.3570056 10.4430273 9.6301253 10.7657857 10.0229058 11.1074243 10.4645502 2.1543888 12.6612945 2.5329154 10.7749783 7.4763201 8.0564654 10.8614059 12.5535630 0.8324445 13.6599554 5.5739319 9.3767520 10.4613649 7.1767596 0.8324445 12.2226328 10.1811920 2.2918982 8.1408027 6.2503155 NA 5.6526414 10.0774222 10.1527002 9.3754956 11.0916186 9.6621866 11.1825743 4.1178696 11.0309089 14.6328077 8.1391410 10.1074242 10.1498764 10.2466205 4.8324647 5.0023875 8.4023193 12.3802019 -0.1674745 10.3461915 5.0222879 6.2754075 5.1543928 9.5224619 11.6734384 10.6736350 12.3751330 12.3304404 7.9514048 9.8863896 9.7942536 10.9162755 10.6313406 4.2247812 11.0191971 10.9212521 -1.1674745 10.2188653 8.6023017 3.4186217 5.2754057 9.7749784 9.1167097 9.8104592 8.8296435 4.5873530 9.2439749 13.7048020 12.4400253 9.9132814 9.6997427 0.8065500 0.8065500 -0.0041546 -0.0041546 0.0036076 0.8516600 -0.0126770 -0.0013858 -0.0096806 -0.0096806 -0.0096806 -0.0284910 -0.0143660 -0.0096010 -0.0096010 -0.0096010 0.3918100 0.3918100 -0.4035100 0.6780800 -0.0353120 0.7817600 -0.0529360 -0.0529360 0.3180300 0.3180300 0.3180300 0.3785800 -0.0575020 0.0000000 0.0127950 -0.0041546 0.0036076 0.0036076 0.8331400 0.8331400 -0.0126770 -0.0126770 -0.0013858 0.4790700 0.4790700 -0.0096806 -0.0077482 -0.0077482 0.8042200 0.8042200 -0.0143660 -0.0198630 -0.0327230 -0.0096010 -0.0096010 -0.0096010 0.3918100 0.3918100 0.3918100 -0.4035100 0.6780800 0.6780800 -0.0264410 -0.0548250 -0.4759600 -0.0529360 -0.4093700 0.3180300 0.3180300 0.3785800 0.7558600 -0.0526660 -0.0526660 0.000 0.000 0.000 0.000 0.392 0.392 -0.404 0.678 0.000 1.193 0.000 -0.423 0.000 -0.409 -0.409 0.318 0.318 0.000 0.807 0.379 0.379 0.756 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.835 0.835 0.000 0.000 0.479 0.479 0.000 0.000 0.000 0.804 0.147 0.147 0.000 0.000 0.000 0.000 0.392 0.392 -0.404 0.678 0.000 1.193 0.000 -0.423 0.000 -0.409 -0.409 0.318 0.318 0.000 0.807 0.379 0.379 0.756 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.835 0.835 0.000 0.000 0.479 0.479 0.000 0.000 0.000 0.804 0.147 0.147 8.4004201 8.0247568 6.2754075 10.8229224 11.0198159 7.8904017 11.8326399 8.9011481 9.4904253 5.1543928 11.6919986 11.5889618 3.6398226 4.7393567 3.4763169 7.0123731 3.9199312 11.2967543 11.2126543 10.9742517 8.9172721 6.0992510 7.1723135 9.9681731 7.0222879 7.1039266 0.8324445 NA 10.8576034 6.0708680 7.7837487 7.7393547 7.4654587 10.8673488 10.0492097 3.7866591 9.3521002 -1.1674745 7.5940148 12.3335546 8.7348390 8.2712557 0.8324445 5.8658867 8.0173390 NA 5.4174272 -1.1674745 5.2075025 4.6904450 3.6398226 10.7105148 2.8324647 8.6006481 10.4590855 9.7676288 6.1543928 9.6865531 12.3481637 8.9822110 2.2918982 4.3243138 10.6442399 0.4173800 NA NA 3.5329029 12.650347 5.613823 8.214007 12.661295 9.571401 10.395660 12.553563 11.808491 8.953997 10.248206 13.593080 10.881291 8.402319 8.959168 2.002378 6.843691 11.417191 11.774245 12.657820 6.792466 13.424975 9.192213 6.099251 9.110913 7.946206 11.310139 7.185611 9.288818 11.107424 7.271256 2.154389 11.088378 5.940989 8.671809 10.280580 10.673242 11.124785 8.323495 8.665354 11.851881 7.324316 11.534985 9.375496 11.439563 10.002389 10.877541 10.759501 10.120753 10.874123 8.520714 -1.167475 9.759879 7.249008 12.380202 7.795360 10.346191 6.696650 11.196598 9.522462 7.550140 13.637351 10.273852 10.496467 12.656826 10.802929 2.291898 NA 9.666935 10.768365 9.731821 TCGA-AR-A5QN 68 0 NA 1013 breast stage iiic t2 n3 m0 female 2012 NA yes infiltrating lobular carcinoma 10 white not hispanic or latino NA NA 3 2 2 2 6 4 4 8 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.242351e-07 2.774378e-07 37.037037037037 25.9259259259259 3.7037037037037 25.9259259259259 7.40740740740741 9.6901958 9.4108812 11.0990701 9.1929763 8.4938426 9.5456389 10.6688775 9.6981098 10.5788788 9.9887638 9.5362517 10.0920798 0.2771516 13.1468835 2.9775364 9.8340818 6.2827215 7.8991484 9.0755687 12.5377959 5.0050182 13.0220883 2.9209602 9.1880243 10.0020369 6.3592453 -1.7230865 9.7017512 8.3724938 3.2312942 8.0584567 7.6864879 -0.1379653 4.3431875 10.0143443 10.0609137 9.8904259 11.3976588 9.8109133 10.8613547 2.0844385 11.3903507 14.2321337 8.3280340 9.9362008 10.5800214 10.8264002 4.5808751 5.8006592 9.1060266 10.5306489 NA 10.9470891 6.8582969 5.5250259 4.0050137 10.3112080 12.0166666 10.2593775 12.0791083 12.6603961 8.5740129 10.6589102 10.5086601 10.6901958 10.3757870 4.8620595 11.3890476 10.7684489 0.5990321 10.2536610 8.8963999 3.0865120 6.2600897 9.7452118 10.2966876 10.3404919 9.1749424 2.9209602 9.7684490 12.2253728 12.0666305 9.3999249 9.0723248 1.0283000 1.0283000 0.0108420 -0.0155820 -0.4767000 -0.0020784 0.0015255 0.0015255 3.6569000 -0.0127130 0.6295200 0.0179630 0.0185740 -0.0053992 -0.0053992 -0.0053992 0.0055529 0.0055529 -0.0047159 -0.0215440 0.0270760 0.0341130 0.0341130 0.0341130 0.0255310 0.0296060 0.0296060 0.0486880 -0.4239600 -0.4629000 -0.0058140 0.0108420 -0.4767000 -0.0034627 -0.0020784 -0.0020784 0.0015255 0.0015255 0.0015255 0.0850760 0.0834870 -0.6085400 0.0000000 0.0000000 0.0000000 0.0428740 0.0185740 -0.4619500 -0.0053992 -0.0053992 -0.0053992 -0.0053992 0.0055529 0.0055529 0.0055529 -0.0024938 -0.0215440 -0.0215440 0.0270760 -0.5786100 0.0532370 0.0341130 0.0134920 0.0255310 0.0296060 0.0486880 -0.0022168 0.9950900 0.6836600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.579 0.000 0.000 -0.450 0.000 0.000 0.000 -0.463 0.565 0.000 0.000 0.000 -0.569 0.000 0.000 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.021 0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.579 0.000 0.000 -0.450 0.000 0.000 0.000 -0.463 0.565 0.000 0.000 0.000 -0.569 0.000 0.000 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.021 0.630 0.000 0.000 0.000 0.000 8.3022363 3.1839946 5.7769436 10.6532223 11.2358308 7.2770409 11.3698540 9.5481921 9.1194314 3.1350751 11.8521633 11.3183299 4.6694123 2.9775364 3.8918080 7.1658406 2.1839946 10.3170440 11.6430092 11.2408961 9.2188780 4.4063802 7.8259185 9.9353083 7.2657819 8.0219305 2.0844385 NA 11.3633990 7.7769429 7.0219305 7.8374299 6.6608017 10.6193744 10.1358550 5.0972779 9.2890229 NA 8.3525758 11.4868548 8.7324242 8.2770967 -0.7228484 3.4865471 9.2735704 -1.7230865 4.5990261 -1.7230865 5.7200404 4.7763041 0.8620347 9.8060393 -0.7228484 8.4217552 10.5403661 9.8264002 4.7365291 9.5928124 13.2968613 8.7996783 1.8620744 3.3214952 13.4645263 2.2770921 NA 2.0844385 2.1839946 13.4934941 5.6434204 7.6629596 13.1468835 10.1443755 11.0183531 12.5377959 11.5867153 8.9504060 10.3448673 13.3097023 11.2714503 9.1060266 7.7138085 0.2771516 7.6564749 11.3221739 11.5353685 12.3805486 6.2714500 12.9958416 8.3960379 6.0649992 9.0336532 8.7947661 10.3965989 7.1194475 8.8249552 9.5362517 8.3077641 1.4469972 10.9384296 7.1131473 7.5804666 10.2841242 10.6161117 10.8554696 8.0262623 9.3718344 11.1520782 5.6169458 11.1430350 9.8904259 10.5506011 9.8885828 10.5888452 9.7563718 10.0596856 10.5344847 8.5578676 NA 9.9689799 7.0906862 10.5306489 5.6346484 10.9470891 6.1536128 11.4759532 10.3112080 7.1036456 12.8858137 9.9299419 10.4755419 13.2602241 10.7093778 3.6694123 0.5990321 9.7390878 9.8326446 9.7065036 TCGA-AR-A5QP 54 0 NA 1185 breast stage iib t2 n1 m0 female 2011 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 5 4 3 3 3 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 3.467973e-08 29.4117647058824 23.5294117647059 5.88235294117647 29.4117647058824 11.7647058823529 9.8903825 9.3914840 10.7620230 8.2322852 8.7190855 9.0236133 10.3680391 9.8095328 10.5461117 10.8964647 11.5563278 10.7118608 3.7689994 12.7236254 2.1409749 9.9547513 8.3108949 8.6429881 9.7775948 12.5569039 2.8514592 13.2481278 6.2051012 9.2766374 10.7028655 4.8108235 NA 11.3624958 8.5503612 1.4888749 8.3592580 7.2888688 0.2665167 4.5641830 9.9553342 10.1843703 9.1942789 10.7173686 9.8595809 11.0197178 6.6588184 11.2601471 14.3431218 7.2533672 10.2163278 10.5676161 10.7108258 5.5763558 5.3253936 8.7163376 11.4043461 -1.3183259 10.6048660 5.6357341 5.2665017 5.4230066 9.9881699 11.8247623 11.2342077 11.9293177 12.6180845 8.7782536 10.7101353 10.6259102 11.1861093 10.0866800 4.1733913 11.5869255 11.9055402 NA 10.3280973 9.2456879 3.1370280 4.2361252 10.2613258 9.8922099 9.9853193 9.4069048 3.4888877 9.3289969 13.3802432 12.9310965 9.6342798 9.9778812 0.4521500 0.7900100 -0.0271970 0.3509800 -0.0292370 0.1436200 -0.0194700 -0.0194700 0.3902300 0.3902300 0.3902300 -0.0010439 -0.0010439 -0.0058875 -0.0058875 -0.0058875 0.0310800 -0.0062924 -0.0013210 0.0014517 0.0145350 0.0257370 0.0208030 0.0208030 0.0346020 0.0346020 0.0346020 0.0152330 -0.3818500 -0.0087880 -0.0069930 -0.3931400 -0.0149890 -0.4117400 0.1436200 0.1436200 -0.0194700 -0.0194700 -0.0065785 0.3765600 0.3717700 0.3902300 0.0379900 0.0379900 0.0379900 0.1330900 -0.0010439 -0.0010439 -0.0058875 -0.0058875 -0.0058875 -0.0058875 -0.0062924 -0.0062924 -0.0062924 -0.0143010 0.0014517 0.0014517 0.0145350 -0.0056814 -0.3880100 0.0208030 -0.0057493 0.0346020 0.0346020 0.0152330 0.0070086 -0.3891200 -0.3891200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 0.000 0.000 0.000 -0.389 0.000 0.000 0.000 0.351 0.000 0.000 0.144 0.144 0.000 0.000 0.372 0.372 0.390 0.390 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 0.000 0.000 0.000 -0.389 0.000 0.000 0.000 0.351 0.000 0.000 0.144 0.144 0.000 0.000 0.372 0.372 0.390 0.390 0.000 0.000 0.000 0.000 8.6829468 7.7476277 4.7039091 11.3942805 11.3871709 7.6039742 11.8664139 8.2651668 8.8304727 3.5395187 12.3267466 10.7884351 2.6815392 4.4364284 3.7689994 8.3486503 2.9294691 9.9055401 11.0706320 10.5733223 9.5049058 4.6588170 7.9921515 10.4225841 6.6415402 7.2011751 1.2665167 NA 10.7276394 6.8414096 7.9966881 7.2245700 8.4856695 11.2822134 9.8470736 5.7039063 9.1140804 0.2665167 8.6913670 12.7053795 9.0802822 6.9576628 -1.3183259 3.0738545 8.6602491 0.2665167 3.2050953 1.0034583 4.8713607 4.4094588 4.4094588 10.3003829 3.7689994 8.6502052 10.6408160 9.7252493 5.0213864 9.0258344 11.4002854 9.0717074 2.4889006 4.6588170 10.5238889 -0.3185058 -1.3183259 1.6815392 3.8108235 12.978112 6.402637 8.594428 12.723625 10.346559 11.043208 12.556904 11.398358 9.032433 10.251394 13.283831 11.514824 8.716338 7.439762 -1.318326 7.606351 10.760357 11.060375 11.843458 5.736821 13.479498 9.031373 6.600402 9.035788 8.025834 10.145094 7.047861 6.375026 11.556328 7.416248 4.266502 11.594802 6.846446 7.707647 10.887637 10.133265 10.759356 10.450897 9.173392 9.843300 7.504906 11.737063 9.194279 10.579384 9.683650 11.244496 9.831286 10.440595 10.353964 8.082418 -1.318326 9.687240 7.132750 11.404346 7.439762 10.604866 6.934204 10.777595 9.988170 7.371536 14.383468 9.703906 10.741221 12.637552 11.233727 3.140975 NA 9.859581 9.637188 9.853966 TCGA-AR-A5QQ 68 1 322 NA breast stage iiia t3 n1 m0 female 2011 NA yes other, specify 1 white not hispanic or latino NA NA 3 3 1 1 5 5 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.28315e-06 3.81477e-07 6.12244897959184 18.3673469387755 8.16326530612245 40.8163265306122 26.530612244898 8.7421969 8.4500845 10.5269000 7.4294444 9.0309427 9.4602947 8.6417046 10.3656922 11.2952893 11.9643502 10.1835621 10.0425415 0.9906645 10.9065322 0.5756028 11.2691023 5.4663857 8.4335963 7.9390202 6.4582590 NA 9.2679402 4.1199371 9.8558216 9.3514998 7.2290572 1.3126071 11.3412910 10.7609038 3.5756149 8.3678633 9.9176900 NA 6.2760555 8.9287620 9.4294446 9.0847305 9.4805008 8.6823963 9.4148190 NA 6.5905661 15.3559329 7.1353112 10.1903252 9.4734608 10.1056965 3.0781145 2.1605653 7.7421969 10.0520240 3.4500895 10.2320402 5.0350476 6.7455399 4.6630770 9.8869852 11.5093060 10.1108907 11.3015496 11.9666799 6.3743579 10.0472905 9.3968578 10.0164845 9.9878323 3.3829715 11.0428812 9.5737356 0.5756028 10.6718912 9.1327598 2.1000021 5.8975430 8.5680815 9.5652464 9.8945347 8.4784930 1.3126071 7.4541775 13.6414802 12.4540495 9.1225097 9.3249260 0.0174040 0.0174040 0.0073609 0.0073609 -0.1304400 0.0267950 0.0000000 0.0000000 -0.1552200 0.1383500 0.1383500 -0.2397900 -0.2397900 0.0604510 0.0604510 0.0604510 -0.0024938 -0.0024938 -0.1348400 -0.0376260 0.0162860 -0.0098185 -0.0098185 -0.0098185 -0.1511900 -0.1511900 -0.1511900 0.0329860 0.0174040 0.0174040 -0.0947240 0.0073609 -0.1304400 -0.1304400 0.0267950 0.0207630 0.0000000 0.0000000 -0.1691700 0.0182450 0.0342540 -0.1552200 0.0012481 0.0012481 0.0012481 0.0012481 -0.2397900 -0.2022400 0.0604510 0.0604510 0.0604510 0.0248290 -0.0024938 -0.0024938 -0.0024938 -0.1348400 -0.0376260 -0.0376260 0.0162860 -0.0793430 -0.2702700 -0.0098185 -0.2592600 -0.1511900 -0.1511900 0.0329860 -0.0087146 -0.0931390 -0.0931390 -0.240 -0.240 0.000 0.000 0.000 0.000 -0.135 0.000 0.000 0.000 0.000 0.000 0.000 -0.259 -0.259 -0.151 -0.151 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.130 -0.130 0.000 0.000 0.000 0.000 0.000 0.000 -0.017 0.138 0.000 0.000 0.000 0.000 -0.240 -0.240 0.000 0.000 0.000 0.000 -0.135 0.000 0.000 0.000 0.000 0.000 0.000 -0.259 -0.259 -0.151 -0.151 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.130 -0.130 0.000 0.000 0.000 0.000 0.000 0.000 -0.017 0.138 0.000 0.000 0.000 0.000 8.837710235 3.691087441 3.691087441 10.416917624 11.155873927 6.835516112 9.905037948 8.790096268 8.934208044 NA 13.264302752 12.240625472 2.575626978 NA 1.575602777 6.854838470 5.219470583 11.952645052 11.561220105 10.111538682 9.890009769 4.605363950 8.458258542 10.303535789 7.839275606 8.255095626 7.575615634 1.575602777 11.116389126 0.990664477 7.145470613 8.788314419 5.785069224 10.575948740 8.850187463 4.276057388 9.972933418 4.035043196 7.903542065 12.353966298 7.732119929 6.956436565 0.990664477 -0.009408127 7.732119929 -1.009262921 4.078114506 NA 7.708329346 3.078114506 4.921388723 11.156815933 NA 10.529326790 10.605362653 10.719423647 8.326043368 10.245090946 13.502405482 10.123794988 3.745538535 5.382971528 9.329389143 7.165578352 NA 3.634511955 4.967934029 12.331076 8.716871 7.933167 10.906532 9.654211 10.969363 6.458259 9.836143 9.150524 9.946303 13.722926 11.508568 7.742197 7.839276 4.745539 7.645289 9.608120 10.9188010 12.2958596 0.9906645 14.4678096 9.7108972 9.4231947 8.9184307 9.6132080 8.9964037 8.5083221 6.3569748 10.1835621 5.5605071 NA 9.9657843 9.7736511 9.4940811 12.3590229 10.1536735 10.0913152 8.0971636 12.0809307 6.9154659 8.2597795 10.2089921 9.0847305 10.5770235 10.3410396 9.5970581 10.7559389 8.4944784 10.1823289 8.3700313 NA 9.9927364 8.2298215 10.0520240 9.0741321 10.2320402 5.2194706 11.0309425 9.8869852 6.8610174 14.3185212 11.0216647 11.1121863 12.2552420 11.2049719 8.0046733 2.8703647 9.3148334 9.0418617 8.7151668 TCGA-B6-A0I1 73 1 2361 NA breast stage iia t2 n0 m0 female 1998 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.81477e-07 25 16.6666666666667 6.25 27.0833333333333 25 10.43202674 8.92749917 9.64828064 6.48473591 8.89553499 9.34684124 8.45181074 10.29134605 11.90432291 13.13633107 8.94842213 9.93704714 5.52073967 12.76263953 1.54092000 11.07403158 7.30763071 10.16865470 8.24443710 3.65639340 -1.62905459 8.63777976 9.01665148 10.46989381 11.24116519 6.11246036 -0.04409209 7.93894911 11.90188716 2.07141946 10.39301413 5.42627482 NA 3.76330533 9.05486502 8.96811466 9.39613272 9.34397293 8.89749245 11.20684618 4.17834815 1.83041760 14.58883730 8.76026952 10.54435797 10.38954111 10.90845425 4.43708122 -0.62905459 7.72854503 8.95030918 -1.62905459 9.09635938 1.95594510 6.50027624 4.65639340 6.79305831 11.98800141 8.96904570 11.26883864 11.76666116 8.25363621 10.86509869 10.16622925 10.32736929 9.53527168 2.89454617 11.23033381 11.89859236 -0.04409209 11.00580424 9.81549041 3.07198571 1.95594510 11.54778965 8.61773376 10.59951130 9.89895881 -1.62905459 8.12754971 11.91414583 12.77467097 9.84622000 9.97924797 3.1053000 1.3795000 0.0112610 0.0108420 0.0190830 1.1427000 -0.0139530 0.0147490 -0.7309100 2.0452000 3.6569000 -0.0067813 1.3253000 0.0041632 -0.0591350 -0.0100940 -0.0412950 -0.0070576 -0.7282300 -0.6984800 -0.0252090 -0.0544200 0.5743400 -0.0182160 -0.0237030 0.5478800 -0.7350300 0.5397700 -0.7370500 0.0087528 -0.3556700 0.0195260 -0.7360800 -0.3541900 -0.7237600 0.0269350 -0.7629500 0.0147490 0.0071196 0.5370400 -0.0115780 -1.2929000 -0.0128510 -0.0128510 -0.0128510 -0.0128510 -0.7093500 -0.0147780 -0.0075368 0.4902700 -0.0100940 -0.0100940 0.0118180 -0.0070576 -0.0070576 -0.6934200 -0.7172000 -0.0226060 -0.7203100 -0.0559030 -0.0544200 -0.0293110 -0.0026322 -0.7194200 -0.7148800 0.5585000 1.0316000 -0.0461770 0.0172640 0.000 0.000 0.000 0.000 0.000 0.000 -0.693 0.000 -0.720 0.000 0.000 0.000 0.000 0.582 0.000 -0.715 -0.715 0.000 0.528 0.555 0.555 0.959 0.000 0.000 0.000 0.000 0.000 -0.708 -0.708 1.130 0.000 0.000 0.000 0.000 0.000 -0.731 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.693 0.000 -0.720 0.000 0.000 0.000 0.000 0.582 0.000 -0.715 -0.715 0.000 0.528 0.555 0.555 0.959 0.000 0.000 0.000 0.000 0.000 -0.708 -0.708 1.130 0.000 0.000 0.000 0.000 0.000 -0.731 0.620 0.000 0.000 0.000 0.000 9.06535097 4.65639340 7.10570322 10.71501157 11.26125742 6.58404850 10.85354902 5.48931172 8.31642229 NA 12.19893124 12.89960722 5.39336128 NA 3.65639340 9.11414445 4.78038360 10.83221676 11.18497474 12.11729755 9.93989930 1.37100119 9.61595161 9.59439160 4.12588250 4.56081887 -0.04409209 1.69291813 10.56790257 3.86284809 2.37100119 8.45978159 9.95830185 10.21585584 11.86459846 0.69296275 8.48863631 3.65639340 7.77826115 12.44538554 8.26732558 7.79935351 NA 6.22274275 8.73074286 6.30763071 2.07141946 -1.62905459 0.95598228 3.58123072 4.30173396 11.20664884 10.26201730 8.23517944 10.72248455 10.63455579 5.98570307 9.70134996 11.68018526 7.55586829 4.25363384 1.17836408 10.39924459 2.95596369 5.55090374 2.07141946 7.59258037 9.054944 9.542170 8.451811 12.762640 8.798306 12.090810 3.656393 9.552767 8.930370 9.654660 14.485081 11.980634 7.728545 8.919815 4.500273 7.983862 10.968347 10.55183474 12.93912744 5.08523768 13.52172656 9.05486502 8.86084116 8.49640682 8.69854598 10.04074630 4.67477135 6.12588043 8.94842213 10.46044361 1.37100119 10.02652386 9.17673715 9.30280911 10.28163590 10.51214233 10.66618813 7.48733681 10.35576766 2.61891990 5.81393763 14.43560122 9.39613272 10.09209232 11.02271762 11.32537124 10.58864803 10.07532912 10.84900437 7.21334339 3.50027943 9.29171083 5.23987917 8.95030918 5.71084224 9.09635938 2.83041760 11.51038466 6.79305831 7.87773689 14.66730000 9.91885161 10.39924459 14.40566319 10.15807947 -1.62905459 -0.04409209 10.81755955 8.31936052 9.28013626 TCGA-B6-A0I2 45 0 NA 4361 breast stage ia t1c n0 (i-) m0 female 1995 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 4 3 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.24847e-06 3.121176e-07 23.9130434782609 39.1304347826087 4.34782608695652 21.7391304347826 10.8695652173913 9.113161 8.306393 10.470827 7.487691 9.450979 9.600097 8.726047 10.263636 12.187293 12.223251 11.527243 10.080486 1.172999 12.129515 1.658417 8.726047 6.350911 8.831206 10.507044 6.530545 -1.148801 9.446323 8.790645 10.267863 10.471286 5.537566 NA 14.094333 10.830848 1.172999 7.159405 8.023493 NA 6.862293 8.221753 10.254611 8.509277 9.072653 8.855286 10.745126 5.990617 6.900914 14.120046 7.976402 8.691844 9.625853 9.657616 1.658417 NA 8.206417 10.576432 -1.148801 11.462782 5.040892 8.370702 6.884489 8.241235 12.041354 10.874474 11.298666 11.978093 5.390224 11.030042 10.389740 10.608873 10.166782 3.310500 11.872566 3.980345 NA 10.370702 9.245529 4.279679 4.805261 8.718345 9.291935 11.035011 9.230444 3.020982 9.115509 12.694791 11.843473 10.138201 9.427550 1.0151000 1.2161000 -0.0173910 0.8988900 0.0000000 0.8390300 0.8575900 -0.0048461 0.4566600 0.4566600 1.4531000 -0.0169790 -0.0169790 1.5998000 1.4548000 2.8122000 2.2059000 -0.0138740 -0.0554990 -0.0161540 -0.0245240 -0.0261670 -0.0261670 -0.0245240 0.4381700 0.4246900 0.8469200 0.8486900 -0.0286280 1.0151000 -0.0289420 -0.0173910 -0.0217840 -0.0084684 -0.0145030 -0.0145030 0.8575900 -0.0048461 -0.0242510 1.7761000 0.8764700 -0.5061900 1.6493000 1.6493000 0.4852700 0.4219300 -0.0169790 -0.0169790 -0.2013700 0.7209300 -0.0314240 -0.0314240 2.2791000 -0.0175290 -0.0175290 -0.0107840 -0.0161540 -0.0161540 -0.0245240 -0.0345750 -0.0261670 -0.0245240 0.3544700 -0.5043200 -0.0372180 0.4883700 0.8964800 -0.0365380 0.7079500 0.000 0.000 1.560 0.000 1.608 0.000 0.000 0.000 0.000 0.751 0.000 0.000 0.000 0.354 0.354 0.368 0.368 1.216 1.216 0.849 0.849 0.000 0.000 0.860 0.000 0.000 0.899 0.000 0.000 0.000 0.000 0.836 0.836 0.881 0.881 -0.050 0.457 1.649 0.485 0.343 0.343 0.000 0.000 1.560 0.000 1.608 0.000 0.000 0.000 0.000 0.751 0.000 0.000 0.000 0.354 0.354 0.368 0.368 1.216 1.216 0.849 0.849 0.000 0.000 0.860 0.000 0.000 0.899 0.000 0.000 0.000 0.000 0.836 0.836 0.881 0.881 -0.050 0.457 1.649 0.485 0.343 0.343 8.2390834 NA 3.3105001 10.6316057 11.2157477 6.3065575 10.8121538 8.4373613 9.4394152 -1.1488007 12.3808625 12.0357088 2.1729995 NA 3.2433797 8.5515056 5.4949212 11.5390976 11.8420562 10.5043588 10.6922371 3.1729995 9.2867361 10.6000973 7.1819831 2.1729995 2.0209822 NA 9.5065966 2.1729995 10.9536978 9.7950458 5.5789870 10.4012403 10.3278121 2.1729995 9.3598510 NA 7.9144611 13.2175247 9.7229711 6.9171548 -0.1489606 -0.1489606 8.4491185 2.8510594 2.1729995 NA 7.3588604 2.1729995 8.0184840 11.1353116 6.5445534 10.3628186 11.1525621 10.1347331 6.7152523 11.7858625 13.2502103 6.9957242 6.0008135 4.7818056 9.8622931 2.9385305 NA NA 1.8510794 14.666760 8.279426 8.342919 12.129515 10.162247 10.973570 6.530545 6.816851 10.665648 11.098896 13.151847 12.052884 8.206417 8.691844 8.672840 6.465775 10.256739 10.971952 11.814323 -1.148801 14.066217 9.043359 7.933215 8.712153 7.956974 10.057042 7.865086 5.537566 11.527243 11.465776 NA 9.736000 5.420920 9.379803 11.742280 10.576432 10.144538 7.405655 8.736762 5.949098 7.943823 11.863392 8.509277 10.625853 11.119023 9.984208 9.541064 10.976479 10.717572 6.889985 NA 9.563662 10.069078 10.576432 9.059300 11.462782 2.851059 11.312034 8.241235 7.867874 15.692999 9.862992 10.564452 12.263371 10.395064 3.980345 -1.148801 9.971304 8.709047 8.994449 TCGA-B6-A0I5 49 0 NA 8556 breast stage iib t2 n1b m0 female 1988 NA no infiltrating ductal carcinoma 5 white not hispanic or latino 1 1 3 NA NA NA 4 4 6 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4.508365e-07 1.387189e-07 33.3333333333333 16.6666666666667 0 22.2222222222222 27.7777777777778 9.6721378 8.3630252 10.6052595 5.8072081 8.6592078 8.7351055 9.2374942 8.9065040 10.8170935 12.1695035 10.1703800 9.8295767 6.0940904 13.6135974 3.2508100 9.9081866 7.8286887 8.2104765 9.1320195 12.8083356 -0.8367589 13.8538964 5.3332770 10.8437122 10.2692612 6.4852803 -0.8367589 9.3041825 11.3301435 0.1633699 8.1377673 6.4942700 NA 4.1633538 7.6671783 9.7844889 9.4017574 10.6622019 9.2653284 11.0115845 11.9263576 11.0344879 15.1559813 6.9992142 9.6094022 10.0135396 10.3987687 4.5556689 2.7483109 7.7632655 10.0236639 NA 10.6395927 4.0213376 4.8357776 4.1175454 9.6927832 11.9541085 11.1226303 12.9174051 12.0346805 7.7179416 10.9022894 10.1555830 10.1219054 10.3758491 2.3332806 11.3645578 10.7716076 NA 10.2186352 9.1276936 5.5375228 2.9707064 11.5126340 9.4591217 10.0041307 9.8895709 2.3332806 10.5104204 11.9336037 11.5448957 9.6145639 10.0135396 1.16650000 1.16170000 0.00041593 -0.01006800 0.00000000 -0.00664320 -0.00484610 -0.00484610 1.08100000 1.08100000 1.08100000 -0.01243800 -0.00871460 -0.00934240 -0.00934240 -0.00934240 -0.00567570 -0.00567570 -0.00346270 0.60359000 0.57363000 -0.00304750 -0.00304750 -0.00304750 0.00527490 0.00527490 0.00527490 0.53837000 -0.00055444 -0.00055444 0.00124810 0.00041593 0.00000000 0.00000000 -0.00664320 -0.00664320 -0.00484610 -0.00484610 -0.00484610 0.52906000 0.52906000 1.08100000 -0.00207840 -0.00277070 -0.00277070 -0.00277070 -0.00871460 -0.00332430 0.01377200 -0.00934240 -0.00934240 -0.00934240 -0.00567570 -0.00152430 -0.00152430 -0.00346270 0.60359000 0.60359000 0.58399000 -0.68998000 -0.00304750 -0.00304750 -0.00140840 0.00527490 0.00527490 0.52693000 -0.00180140 0.00583090 0.00583090 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.604 0.584 -0.084 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 1.167 1.167 0.538 0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.529 0.529 1.081 1.081 0.000 0.000 0.146 0.146 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.604 0.584 -0.084 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 1.167 1.167 0.538 0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.529 0.529 1.081 1.081 0.000 0.000 0.146 0.146 9.5854176 NA 5.4301381 11.4094995 12.0454226 8.4388488 10.9336037 6.6997945 9.2661683 0.1633699 12.7763364 12.4982182 7.2132014 NA 1.9707064 8.3054599 4.2508176 10.2152414 11.3602622 10.5307675 10.0298589 0.1633699 7.7102472 10.1449200 6.2508157 6.0213331 3.4852851 NA 9.9098670 4.2926345 6.5556705 8.5599575 7.8568394 10.3143375 10.7826557 3.4852851 8.0581704 1.9707064 7.0025563 13.1185486 7.4254476 8.3181708 0.7482895 0.1633699 8.8672562 5.0940882 4.5209062 0.1633699 4.7179396 3.4112771 2.8637997 11.1352555 NA 7.8844520 10.6155940 9.7632657 5.7332079 9.1940198 10.5885687 7.3181713 2.3332806 3.7483109 11.2682791 2.7483109 -0.8367589 3.2508100 3.4852851 12.777925 5.333277 9.213201 13.613597 10.141348 11.291669 12.808336 11.878671 8.692783 9.580857 13.216939 9.476236 7.763265 9.171781 1.163370 6.606296 11.017442 10.8788858 13.0538070 5.2508138 13.6015546 9.1576779 6.2508157 9.0119758 7.2348155 9.4517574 6.2718776 8.2718771 10.1703800 7.7483150 2.6227898 11.2247239 7.5470572 5.8066308 10.8763096 10.5187038 10.5917129 9.1406327 10.2620428 7.5296750 5.1633538 11.4053865 9.4017574 10.9634437 10.8013360 10.2206676 8.5231024 9.7426687 10.5722132 7.0822161 1.9707064 9.0892484 6.5032024 10.0236639 6.0213331 10.6395927 6.4487556 10.6481756 9.6927832 7.2189603 15.3373226 10.4029513 10.1898762 12.6961957 11.3972719 4.6869151 -0.8367589 9.4796344 9.5329500 9.2428376 TCGA-B6-A0I6 49 1 991 NA breast stage iia t1c n1 m0 female 1990 NA no infiltrating ductal carcinoma 6 black or african american not hispanic or latino 3 3 NA NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.358222e-06 6.935946e-07 7.60869565217391 16.304347826087 5.43478260869565 43.4782608695652 27.1739130434783 10.2351651 9.7616927 12.1983568 9.1489407 7.6677169 8.5091705 10.1972266 11.0516163 11.9470802 12.3662719 11.3794108 10.7420639 1.8798234 11.8864907 2.8798234 9.8847366 7.2152039 7.9619630 10.6782858 7.1086332 0.4647728 6.6479980 9.0597230 9.0652470 11.9896446 5.4344014 1.6871503 7.7532582 11.0600339 0.4647728 10.0161644 7.8193929 2.9672793 6.9935566 9.6026215 9.7971860 8.4053347 10.4391910 9.9652865 11.0456631 2.0497353 10.8234277 15.9769202 8.6204885 8.9364516 10.5223170 10.7264797 3.6871727 NA 9.1014011 12.5305292 -1.1202942 10.2764187 6.3555467 5.0696377 5.5663159 8.4889925 12.2302007 9.4787969 11.9485922 13.2301317 6.7746316 11.3799089 11.3742371 10.8307343 12.0673207 5.0497397 11.7414825 10.8727523 1.6871503 10.6770702 10.0528665 3.2017436 4.2017436 8.7639845 11.0494259 10.6811181 9.5182499 3.0497353 9.9532862 12.5364623 12.1036649 10.3920606 10.6517161 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 7.6446855 NA 7.5164383 10.6943965 11.8725753 5.3287144 11.5621502 9.3999514 8.0929669 -1.1202942 11.3796598 10.8835427 6.6611738 NA 4.7867061 8.7190177 3.5802540 8.8527938 11.5940595 10.8005390 9.2051195 -1.1202942 9.1170238 10.0923104 6.5018658 1.6871503 1.2017593 -0.1201374 10.6254883 0.4647728 8.7015879 9.0892675 5.6999930 10.7508991 10.7836958 1.8798234 10.1506933 6.7439996 8.5540063 13.4306810 8.6709770 10.6875714 NA 2.8798234 7.5415923 4.6611738 6.4572430 -1.1202942 3.0497353 3.5802540 2.4647728 11.4065577 8.1813103 8.3165255 10.4033760 10.3175660 7.5451498 8.5974906 11.5424823 7.5018658 4.5236686 4.3060799 10.7551794 3.1277488 2.3392514 2.0497353 7.5592937 9.670472 9.209610 8.487144 11.886491 10.946240 11.005550 7.108633 11.133661 9.591808 11.896796 12.149379 11.552239 9.101401 8.351489 8.516439 7.566314 11.103816 10.893137 12.364133 6.210732 14.761692 8.335141 8.851357 9.360604 4.049735 11.461770 6.355547 5.289204 11.379411 9.979162 6.254853 10.580254 8.992253 10.708407 13.496018 11.232133 10.827451 7.804627 9.166372 8.909101 5.219664 10.686513 8.405335 9.907720 10.172136 12.154192 11.794573 10.763221 11.243675 8.679095 8.328963 9.512200 7.516438 12.530529 7.003935 10.276419 6.810551 11.304177 8.488993 8.096802 14.993434 10.393542 9.796440 12.376793 11.922670 -1.120294 NA 10.772736 10.366146 9.607734 TCGA-B6-A0I8 46 1 749 NA breast stage x t1 nx m0 female 1992 NA no infiltrating ductal carcinoma NA white not hispanic or latino 1 2 NA NA 4 2 2 2 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-06 9.01673e-07 7.86516853932584 21.3483146067416 6.74157303370786 40.4494382022472 23.5955056179775 10.232687 9.862812 11.971189 10.368587 9.232312 7.736796 9.836896 8.957072 9.331597 14.105655 11.144145 10.678244 1.130536 14.190737 3.846734 9.015784 1.323197 7.825006 9.804463 12.942127 2.410640 13.104016 5.265684 9.151305 11.217418 8.836896 NA 7.522840 9.157639 1.130536 7.640581 6.373017 NA 5.091353 10.493406 11.892549 9.453739 11.070103 10.330196 12.365341 3.277360 10.715217 14.856970 7.348363 9.409305 9.900597 11.429241 3.532616 1.493084 9.910477 10.472280 -1.676688 9.000007 4.472917 3.532616 4.323168 9.703088 11.708626 9.773349 11.542337 12.693175 9.273724 10.732559 10.692463 11.228179 11.020788 5.671896 12.677142 8.876798 3.410626 10.384540 9.415926 3.684942 4.749432 9.831954 9.415265 10.979146 11.175113 1.493084 8.262747 11.443082 10.234186 9.809501 9.465276 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.00264852 NA 4.76611277 9.75779667 12.55798588 6.50615919 11.00638240 8.25014632 8.62923020 NA 10.51576951 13.17906813 4.66302006 NA 3.90813078 7.96702447 2.57109428 8.86232740 12.37599118 10.96589710 8.77128477 2.23004927 7.41328096 9.32457661 5.73255955 7.19353325 NA -1.67668758 10.99691915 4.73255684 5.51299165 8.11433110 8.81902339 10.45657722 10.33404619 2.64510214 6.93419330 NA 6.03052810 11.96600987 8.49559604 6.46271984 NA 8.02534114 8.70146346 1.64510214 4.36755978 NA 0.32319711 3.53689837 -0.09187883 10.67962040 -0.67691821 9.39060277 10.36482760 9.77231705 5.19353127 9.55018268 10.72084310 6.87391530 -0.09187883 1.49308367 12.99802276 1.49308367 NA 1.13053556 4.18115027 12.749302 3.908131 9.009669 14.190737 9.705793 10.571986 12.942127 10.734944 8.887318 11.044695 12.855220 10.271171 9.910477 8.515461 2.323168 7.817024 13.467030 10.982272 12.969840 5.749432 13.353274 8.515461 2.410640 9.271536 8.303308 11.185568 5.168658 5.915626 11.144145 4.205815 3.078063 10.926563 6.193533 7.366469 10.156058 9.615490 9.717631 8.599293 8.735738 12.209151 4.830965 13.971710 9.453739 11.501678 10.697665 11.655205 9.922616 10.170617 10.820272 9.532012 NA 9.470386 6.706873 10.472280 4.323168 9.000007 6.702547 10.366879 9.703088 7.416005 12.810003 9.477354 10.067161 13.107599 9.613763 NA 3.078063 10.103298 9.348308 9.828980 TCGA-B6-A0I9 62 1 362 NA breast stage iv t3 nx m1 female 1992 NA yes infiltrating ductal carcinoma NA white not hispanic or latino 3 2 1 NA 5 1 2 2 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 1 0 0 0 0 0 1.733986e-06 3.81477e-07 27.4193548387097 17.741935483871 1.61290322580645 27.4193548387097 25.8064516129032 10.36731100 10.17152998 11.80393970 9.69500534 8.87469647 8.97037455 10.15831443 10.55655855 10.46422226 14.37561867 11.16373546 11.35314545 -0.06491748 17.57079264 4.41624525 8.13805724 2.67208584 8.58616875 5.61693988 12.77287647 -1.64972908 13.93467680 3.20814265 9.59773209 11.45048845 3.99400941 -1.64972908 10.64190092 11.25591770 2.05060617 8.06440003 7.11833896 -0.06491748 5.03665718 10.46747309 10.20463350 9.74729441 11.75529612 10.67489773 11.37650517 2.99401847 10.04494787 14.72312170 9.03135797 9.56932323 10.99468692 11.64707085 3.87371478 7.19564485 9.13887308 10.63179494 -1.64972908 10.92356512 5.66303715 5.42696915 4.82588737 11.25384825 11.79788363 9.61107424 11.13703685 12.34768700 8.61107424 10.86560809 10.59923549 10.78712641 10.97220648 5.38357643 11.57731930 11.53053007 1.93512025 10.75582795 9.17590853 3.63667102 3.20814265 11.35735714 9.68330994 10.67995101 9.96899892 1.93512025 8.22820541 11.42077875 9.94494583 9.93417752 9.44555167 1.1962000 1.1962000 3.0762000 -0.0222710 -0.0336160 0.0090939 0.4106900 0.4347000 0.0306550 0.0306550 0.0113230 -0.0038156 0.0068670 -0.4597700 3.6569000 1.6519000 0.3321200 0.0040972 -0.0145790 0.5223100 -0.0162300 -0.0141660 3.6569000 0.5621700 -0.4760200 -0.0404190 -0.0677990 1.0924000 -0.4583400 -0.4461500 -0.4306700 -0.4428100 -0.0710790 -0.0215850 0.0090939 0.0090939 0.4106900 0.4347000 0.4120300 -0.9322000 -0.4549600 -0.4888500 -0.4621200 -0.4377300 -0.9238000 0.7204500 0.0068670 0.0074235 -0.5064500 -0.1696200 -0.4530300 -0.4534600 0.0081193 0.0040972 -0.0085145 0.4406200 -0.9217100 -0.0311610 0.8296900 0.0061715 -0.4666900 -0.4498600 -0.0141660 0.6537700 -0.0404190 -0.4565600 0.0037379 -0.4513100 -0.0280200 0.000 0.000 -0.439 -0.439 0.000 0.000 0.000 -0.496 0.000 0.000 0.000 -0.414 0.000 0.000 0.000 0.000 0.000 -0.439 1.108 -0.457 0.429 0.000 0.000 0.000 -0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.416 0.416 0.485 0.051 -0.482 0.000 -0.462 -0.462 0.000 0.000 0.000 0.000 -0.439 -0.439 0.000 0.000 0.000 -0.496 0.000 0.000 0.000 -0.414 0.000 0.000 0.000 0.000 0.000 -0.439 1.108 -0.457 0.429 0.000 0.000 0.000 -0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.416 0.416 0.485 0.051 -0.482 0.000 -0.462 -0.462 0.000 0.000 8.86585450 NA 4.10504106 10.40306231 12.03117340 4.00464521 11.83812026 7.87577331 9.06409954 1.52009533 11.92261804 11.40740857 5.75954469 0.67210848 3.10504106 8.50750171 3.67208584 10.98564608 11.07424210 11.37356247 9.12494171 2.80957908 8.52258232 10.51914007 6.00120550 5.28089323 1.15749650 -0.06491748 9.98314981 3.59807931 4.97951323 8.53874339 4.74246978 9.84375495 10.89873575 0.93508252 9.26453971 NA 5.37252382 12.40941459 8.25403652 6.84200833 NA 8.49608680 8.39727845 NA 2.59807931 -0.06491748 4.95006709 6.48560715 2.74248056 10.99017361 2.25704080 6.60282058 10.67010898 9.99626332 3.93512025 10.77353321 13.53974759 7.61694135 5.85000176 2.59807931 10.45540840 2.15749650 -1.64972908 0.93508252 -1.64972908 14.63236891 6.94634487 8.74461725 17.57079264 9.86979092 11.62845889 12.77287647 11.51223123 10.41658021 11.28973385 13.22345456 8.19877750 9.13887308 9.33029419 -0.06491748 8.63440050 12.15398307 11.37182869 12.11606228 6.46389706 13.81399764 8.19564485 5.26901818 9.57475926 9.07210821 11.24175612 5.55960806 4.59807931 11.16373546 5.73385865 -0.06491748 10.99985988 6.45867893 7.74283690 9.93182604 9.99085150 10.90953176 7.54491113 8.19721178 10.97700438 7.19564485 12.55789044 9.74729441 9.09162156 9.88299757 11.60503562 9.77903822 10.14457056 10.75316668 8.61811162 4.79309994 8.49244047 5.80958680 10.63179494 7.60045338 10.92356512 4.99400941 10.80753549 11.25384825 7.58137611 13.41194772 10.00657953 10.09288515 12.33091901 11.34856877 -0.64995543 7.65849357 11.03577950 10.33741864 10.15105460 TCGA-B6-A0IA 51 0 NA 8391 breast stage iia t2 n0 (i-) m0 female 1992 NA no other, specify 0 white not hispanic or latino 1 1 3 NA NA NA 4 1 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 2.080784e-07 11.7647058823529 23.5294117647059 0 35.2941176470588 29.4117647058824 9.9254266 8.4551542 10.3357668 7.3404644 9.1257252 9.0242801 9.1047945 9.7808571 9.2214298 12.4109752 11.4598712 10.0614824 1.6159341 12.2818412 2.7034108 9.3741733 6.4168499 7.7808573 10.7129947 13.0141594 0.9378717 14.1211725 4.6820395 10.7514222 10.5889300 8.1686195 -0.3840188 9.7439446 13.4393672 NA 5.3841362 7.2489456 -1.3842071 1.4233092 7.4038531 10.7316441 11.4551540 11.1113056 7.8057748 9.6187652 4.6820395 10.3357668 14.8958509 4.7742072 8.0916834 10.2116739 10.7992754 2.3163775 -0.3840188 8.5860561 9.0630334 NA 11.5553457 3.9378811 5.0753829 4.8447673 10.0886410 11.8363285 10.5119041 12.9937708 12.7074682 9.4801362 11.2963097 10.0723047 11.0969928 9.8429644 1.6159341 12.9924826 10.4762613 1.7858853 10.4731536 8.3146548 0.6159812 1.6159341 10.4828427 10.1690995 8.8131668 9.4893942 -1.3842071 9.0926964 12.1646517 11.9193029 8.8839073 9.3907373 1.39690000 1.52720000 0.77314000 0.78258000 0.00169420 -0.00038592 1.58540000 -0.90067000 1.66580000 1.66580000 1.60460000 0.00683440 0.00683440 -0.01057100 -0.01057100 -0.01057100 -0.00329450 -0.01227000 0.00989700 0.00447110 -0.00702780 -0.02175400 -0.02175400 -0.02175400 -0.02463200 -0.02463200 -0.02463200 -0.01997100 -0.01199500 -0.00495460 -0.00702780 0.77929000 -0.00592240 0.03456700 -0.00038592 -0.00038592 -0.92210000 0.14759000 -0.90067000 0.00000000 -0.00412470 -0.89103000 0.00127800 0.00127800 0.00127800 0.00127800 0.00683440 0.00683440 -0.01057100 -0.01057100 0.00502690 0.00502690 -0.01227000 -0.01227000 -0.01171900 0.00989700 0.00447110 0.00447110 -0.00702780 -0.88068000 -0.02175400 -0.02175400 0.00822590 -0.02463200 -0.02463200 -0.01997100 0.01031500 -0.00978870 -0.00978870 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.881 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.397 0.000 0.000 0.000 0.000 0.000 0.000 0.783 0.783 -0.871 -0.871 0.000 0.000 -0.873 -0.873 0.000 0.000 0.775 1.666 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.881 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.397 0.000 0.000 0.000 0.000 0.000 0.000 0.783 0.783 -0.871 -0.871 0.000 0.000 -0.873 -0.873 0.000 0.000 0.775 1.666 0.000 0.000 0.000 0.000 10.2407457 NA 7.5107681 10.7093678 11.4488402 7.6990838 10.9234356 3.4513694 10.8226593 NA 13.3637236 12.0217392 4.3973101 NA 0.6159812 7.9401309 0.2008810 9.6507491 11.2868277 10.5455785 10.1724563 3.6603468 6.7808573 10.2237428 3.6603468 2.9378717 3.6159459 NA 11.2978474 0.2008810 4.7244757 8.2084070 6.5228404 9.8020644 10.5374193 1.2009437 8.2009128 -0.3840188 5.9735011 12.8136276 7.4924669 6.7139817 NA NA 9.7309938 NA 1.7858853 NA NA 3.2597997 NA 10.6830484 0.2008810 5.0588922 9.9117191 9.9185891 2.2009123 9.9485462 11.4897788 6.9333625 2.3163775 4.9558010 10.9610782 NA 5.6820395 5.4863154 2.6159577 13.9191505 5.4863154 9.3146548 12.2818412 9.8943996 12.1491582 13.0141594 11.8387451 8.6833845 9.8026834 13.8697977 9.9390050 8.5860561 9.8501689 0.6159812 6.9778935 11.3183393 9.9844566 11.8758405 5.7244757 13.3182295 10.1067910 1.6159341 9.0285200 8.1705390 9.2991553 5.7139817 7.3540422 11.4598712 5.8254040 -0.3840188 9.7902517 9.1512256 5.4457995 7.2269747 9.8780451 10.9912612 8.4801362 10.0285200 11.9695106 1.2009437 9.7043078 11.4551540 9.9828188 10.0295781 9.8897458 8.5496407 10.2074726 10.1057981 7.8850771 NA 8.1753275 3.9378811 9.0630334 -1.3842071 11.5553457 5.4361285 10.0306354 10.0886410 7.1863748 14.8073565 11.1294311 11.2868277 12.2641954 9.7420092 -1.3842071 NA 9.7179259 9.3396111 9.1781925 TCGA-B6-A0IB 64 1 3941 NA breast stage iv t3 n3 m1 female 1992 NA no infiltrating ductal carcinoma 8 white not hispanic or latino 1 1 2 NA 2 2 4 1 6 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 2.774378e-07 18.6046511627907 32.5581395348837 2.32558139534884 32.5581395348837 13.953488372093 9.3528075 8.7036821 11.5682042 8.5578787 8.5872727 9.1994567 10.0305227 9.5329181 9.3831513 13.1475766 10.7714063 10.5951315 1.1778540 12.0373056 2.4579882 9.1608753 8.2269526 7.5848460 10.8255971 12.8636943 3.7628484 13.8412174 6.9741530 10.1086486 11.3861161 8.6708793 1.1778540 7.0708970 12.1699096 -1.6295009 7.8523260 6.1907057 -0.6295009 2.9554802 9.3326999 10.2195409 9.2455083 9.4770898 9.2676159 10.8683786 1.6924718 10.1649426 14.5472454 8.8157797 9.5379450 10.9613477 10.5395123 3.3247242 0.9554616 8.0394121 10.0674943 -1.6295009 9.1762707 6.8980039 1.3704991 5.4579882 8.7692706 11.8656323 10.0416255 11.3756250 12.1714267 9.9038565 11.0920533 10.7340045 11.0215785 10.7120456 4.3012657 11.8626303 11.5611231 -1.6295009 10.7181481 9.0125785 2.9638810 2.1778859 10.9289475 10.0552754 9.6657218 9.5010973 -0.6295009 9.0631424 13.9301130 11.2634490 10.3341454 10.0340849 1.1396000 1.1396000 -0.4711800 0.0265140 -0.4464200 -0.4575800 0.0084743 0.0093098 0.4616100 0.4616100 0.4616100 0.4624600 -0.4508300 0.2834300 0.2834300 0.2834300 -0.0053992 0.0088920 0.5749600 0.7444200 -0.4424300 -0.2896400 -0.2896400 -0.2896400 -0.1663700 -0.1663700 -0.1663700 0.4057700 -0.4459000 -0.4421000 0.0109820 -0.4536100 -0.4464200 -0.4464200 -0.4575800 -0.4504000 -0.0171160 0.0093098 0.0093098 0.4089400 0.0136320 0.4616100 -0.1420700 -0.1420700 -0.1420700 -0.1420700 -0.4508300 0.2869100 0.2834300 0.2834300 -0.6299800 -0.6299800 -0.0053992 0.0088920 0.0088920 -0.9478800 0.3533200 0.2711100 -0.4424300 -0.4546100 -0.2896400 -0.2896400 0.1843400 -0.1663700 -0.1663700 0.4057700 -0.4060600 -0.0040162 -0.0040162 0.462 0.462 0.283 -0.347 0.000 0.000 -0.468 0.353 -0.442 0.394 -0.056 -0.290 -0.290 0.184 0.184 -0.166 -0.166 -0.442 0.605 0.406 0.406 -0.406 0.000 0.000 0.000 -0.454 0.000 -0.446 -0.446 -0.450 -0.450 0.000 0.000 1.326 0.000 0.462 0.462 -0.142 -0.142 0.000 0.000 0.462 0.462 0.283 -0.347 0.000 0.000 -0.468 0.353 -0.442 0.394 -0.056 -0.290 -0.290 0.184 0.184 -0.166 -0.166 -0.442 0.605 0.406 0.406 -0.406 0.000 0.000 0.000 -0.454 0.000 -0.446 -0.446 -0.450 -0.450 0.000 0.000 1.326 0.000 0.462 0.462 -0.142 -0.142 0.000 0.000 8.4339217 6.6651469 7.4972315 10.5760146 11.8428369 7.9054135 11.8682539 8.5690946 9.9125623 -0.6295009 10.3250866 11.7846571 1.8299713 2.6924495 1.8299713 8.9241560 0.9554616 8.4593152 11.5360619 10.8530827 9.5316587 2.9554802 7.5075180 10.2002496 5.1254155 6.1843081 0.3704991 NA 10.7764660 6.7014437 3.2285109 8.4433294 9.1444903 10.6127839 10.6700211 1.9554988 8.5454526 -0.6295009 4.3705270 12.6348961 7.8503069 7.4946484 -0.6295009 0.6924272 8.5379448 NA 3.0709732 0.3704991 1.8299713 3.4149203 1.6924718 10.3645266 NA 8.9545497 10.5805893 9.8487908 3.7628484 10.3499520 11.5724975 6.3012639 3.6924495 3.2774195 13.9600024 3.7967950 NA 0.6924272 3.5799766 13.847778 6.342071 7.915491 12.037306 10.088203 11.339014 12.863694 10.984316 8.204998 10.436280 13.238240 9.143666 8.039412 9.572651 2.070973 7.155161 11.276666 10.7962672 13.0922135 7.2804200 14.1495259 8.2516410 2.5404489 9.5055948 8.4982632 10.5144233 3.6184501 6.1843081 10.7714063 6.1254135 6.5354340 10.4046379 10.8508122 7.1756254 8.0916258 9.5628196 11.3055076 8.1334736 9.3442242 9.3880313 3.2285109 11.9231767 9.2455083 11.0897017 10.8004565 11.6901989 9.7064753 10.3287170 10.6475235 7.1875104 9.5769308 8.6078444 7.3733420 10.0674943 3.2774195 9.1762707 5.3705270 9.7633809 8.7692706 7.1810986 13.4746341 9.6969562 9.2424320 12.3556572 10.5981428 0.9554616 2.7628378 10.1345690 10.0670597 9.2222759 TCGA-B6-A0IC 90 1 1542 NA breast stage x t2 nx mx female 1992 NA no other, specify NA white not hispanic or latino 1 1 3 NA NA NA 4 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 2.427581e-07 12.9032258064516 22.5806451612903 3.2258064516129 38.7096774193548 22.5806451612903 10.7551554 10.0606686 12.0853610 10.0716594 8.3282387 8.5385661 11.0679514 8.8019114 10.3054161 13.1622256 11.4663059 10.4041116 -0.4727294 12.9051369 3.4018079 9.5547841 6.9730441 8.1457243 11.0852812 13.6874730 3.6972623 14.4183315 9.0351337 9.7886033 10.9718362 7.1469474 -0.4727294 9.6998247 10.0238598 0.5273707 8.0456641 4.5273394 NA 1.8492787 10.2991035 10.1702931 11.6616583 11.8476694 10.3668052 10.9768315 3.5570914 11.1812290 14.6085727 9.2156417 10.9007479 12.4498614 11.6739076 3.1902988 7.2068190 8.8560140 12.3920410 -0.4727294 11.6227360 7.4815355 3.5862363 4.1122998 10.1997642 12.1425854 10.3448556 11.3371071 13.1700300 8.5055726 10.7513406 10.7289851 11.3960329 11.4090902 5.6148011 11.4855291 11.5726436 NA 10.5471613 8.9737329 3.9448584 3.5273331 11.0471390 10.1426621 10.8104273 9.5413594 -0.4727294 5.9647452 12.7286971 11.7584601 10.4822622 9.6103751 -0.00110870 -0.00110870 -0.00268620 -0.00235530 0.00235810 0.00097064 -0.00020293 -0.00020293 0.00176170 0.00176170 0.00176170 -0.00443120 0.00444110 0.00069327 0.00069327 0.00069327 -0.00166290 -0.00166290 0.00458000 0.00208050 0.00166420 -0.00318590 -0.00318590 -0.00318590 -0.01257600 -0.01257600 -0.01257600 -0.00290910 -0.00110870 -0.00110870 -0.00318590 -0.00268620 0.00235810 0.00235810 0.00097064 0.00097064 -0.00020293 -0.00020293 0.00388540 0.89487000 -0.95551000 0.00652620 0.00583090 0.00583090 0.00501240 -0.00280700 0.00444110 0.00444110 0.00069327 0.00069327 0.00069327 0.00069327 -0.00166290 -0.00235530 -0.00235530 0.00271050 0.00208050 0.00208050 0.00166420 -0.95043000 -0.00318590 -0.00318590 0.01516800 -0.02611900 -0.01257600 -0.00290910 0.00000000 -0.00622860 -0.00622860 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.105 -0.950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.895 -0.956 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.105 -0.950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.895 -0.956 0.000 0.000 0.000 0.000 0.000 0.000 8.87163484 NA 7.98677043 10.85694843 11.49972049 7.63642089 11.84992438 10.88947271 9.28468439 NA 10.92946274 9.74301352 2.02984156 4.29992598 3.82502236 8.59880139 1.84927873 7.06131718 11.64951985 10.63062671 9.18733475 1.84927873 7.88048595 10.50127542 3.36864265 1.64279398 -1.05769194 NA 10.56213794 7.28667234 8.72373602 8.85451717 4.72373875 11.28513036 10.53155945 2.64281708 8.40998190 -0.47272944 8.18911687 13.24911459 9.97958025 6.27329395 -2.05769194 1.52732061 7.64628004 1.64279398 1.40179428 -2.05769194 -2.05769194 7.33679663 0.52737066 10.53483346 -2.05769194 3.91965471 10.25978904 9.51223202 2.64281708 9.75975988 11.71973452 6.17599558 2.11229979 2.26429621 12.73526839 2.94238313 -1.05769194 -0.05769194 0.52737066 14.321877 5.142050 8.829597 12.905137 10.415575 10.342188 13.687473 13.375212 9.215006 10.785905 12.486918 9.203884 8.856014 8.143275 1.401794 7.646280 11.141589 11.07182044 12.04934825 9.14878034 13.72404121 8.82730999 1.11229979 9.49216104 8.65662186 10.39686601 5.32608068 6.92251543 11.46630588 5.09212285 NA 11.38467201 7.16396359 6.45499836 7.23469770 9.85750893 10.56785695 9.60415456 8.76175732 13.37537498 -0.05769194 12.39885472 11.66165831 10.26430454 10.21179536 12.30760529 8.62975221 9.78315442 10.63608115 9.34751795 NA 9.65948738 7.12903568 12.39204099 -0.05769194 11.62273598 1.64279398 10.81428164 10.19976423 7.45811538 13.86853250 10.50700233 10.65059818 12.60226086 9.85788243 NA -1.05769194 10.74670913 10.64324959 9.99969128 TCGA-B6-A0IE 38 1 1993 NA breast stage iiia t3 n1b m0 female 1995 NA yes mixed histology (please specify) 6 black or african american not hispanic or latino 1 2 4 NA NA NA 3 4 4 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 7.282743e-07 1.040392e-07 28 8 8 32 24 9.7070153 7.9793126 10.5887525 6.6428849 10.0773728 9.6003683 10.0437357 10.4004687 10.1159415 15.0504031 10.8590184 10.6205504 1.7504779 11.9984215 1.8879931 9.9628688 7.6906608 8.4919609 9.7448475 12.7875604 1.0134980 13.1326316 4.3827641 9.6495125 11.6361903 6.6573842 2.6764931 6.7093361 10.8374263 -0.5715360 8.9472190 6.5370910 -1.5713216 5.9831555 7.6812314 9.1176904 7.0247552 9.5617082 9.2391376 10.1767587 4.6573828 11.9513926 14.5216533 5.8395691 9.8637152 9.7855680 10.0697145 3.8208835 3.6764931 8.7312050 10.5798996 NA 11.3245198 5.2229823 3.5578512 3.4729556 9.2431483 12.1047434 9.6567833 11.5437721 12.4538785 6.5265978 10.8173904 9.8859468 10.7312048 10.4547434 2.5160404 11.7421575 11.8126751 0.7505208 10.5607443 8.5846491 3.7002177 3.5160278 9.3710803 9.6115809 11.1198732 10.6971079 2.5160404 8.3900154 13.0501027 11.2948789 9.3965125 10.0354337 0.5228700 0.5440000 -0.0309500 0.0278430 0.0487510 -0.0645860 -0.0110600 0.0327040 -0.0239470 -0.0239470 1.5406000 0.5114200 0.5316200 -0.5903900 0.5051600 0.5051600 0.0037465 0.0037465 -0.6028800 0.0102850 -0.0574710 -0.6063200 -0.0744960 0.9894900 -0.0740100 -0.0740100 -0.0740100 2.6354000 -0.0540160 0.0218010 -0.0049844 -0.5898000 -0.0102180 -0.0192600 -0.5712000 -0.5712000 -0.0110600 0.0327040 0.0287630 0.0000000 -0.0052610 -0.0487080 -0.0081624 -0.0081624 -0.0089906 -0.0369250 0.5211800 0.4554700 -0.6070900 0.5051600 0.5229400 0.5229400 0.0037465 0.0114000 -0.0560070 -0.5387500 -0.0198630 -0.0198630 -0.0418460 0.4616100 -1.2333000 -0.5873500 -0.0019399 -0.0740100 -0.0740100 0.9511600 -0.5718000 -0.0934030 -0.0934030 0.511 0.000 -0.085 0.505 0.000 0.000 -0.548 0.000 0.000 0.422 0.422 -0.532 0.000 0.000 0.000 0.000 0.000 0.523 0.523 0.951 1.404 -0.586 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.571 -0.571 0.000 0.000 0.000 0.000 1.619 1.619 0.000 0.000 -0.380 -0.380 0.511 0.000 -0.085 0.505 0.000 0.000 -0.548 0.000 0.000 0.422 0.422 -0.532 0.000 0.000 0.000 0.000 0.000 0.523 0.523 0.951 1.404 -0.586 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.571 -0.571 0.000 0.000 0.000 0.000 1.619 1.619 0.000 0.000 -0.380 -0.380 9.47909472 -1.57132159 5.28654852 10.52922819 12.40226326 6.98579982 10.71944872 6.80889727 8.40308107 1.59850813 10.43454129 12.81819185 6.67649309 7.76618766 1.59850813 8.15137330 3.85483348 8.71396794 12.01868504 10.24354877 10.28965283 7.84852592 8.89311159 9.51138027 6.52132247 5.24874354 1.42857122 NA 9.42433302 5.04327450 7.35040708 8.52791366 6.47296047 11.06677101 10.18261819 3.38276407 8.29120340 -1.57132159 6.31120882 12.65956199 8.31426238 8.18345327 -1.57132159 6.94031830 7.68595346 3.55785118 5.04327450 0.01349799 3.95212852 4.69535359 3.67649309 11.03982128 3.92041717 7.72777414 11.06994029 10.33620772 4.01352479 9.85535470 10.71714362 7.38566830 3.92041717 2.88799310 11.03889869 2.42857122 NA -1.57132159 1.01349799 13.370834 5.516028 8.879777 11.998422 10.135494 10.603804 12.787560 11.457853 9.073116 9.958972 12.191986 10.411916 8.731205 8.839017 2.013534 8.200056 11.600368 11.014467 11.342390 6.417250 12.826104 8.778367 8.132469 9.008824 6.745978 10.367451 5.516028 9.786668 10.859018 6.467485 4.183455 10.296231 4.638022 8.101133 10.799798 10.388930 10.937846 7.009766 9.141093 6.183453 8.292752 11.421904 7.024755 10.757241 11.097894 10.179273 8.321867 10.674416 10.606608 7.944266 1.013498 9.470328 6.013529 10.579900 8.680048 11.324520 5.439793 11.043490 9.243148 7.954380 14.685420 10.518016 11.146456 11.854700 11.632373 -0.571536 -0.571536 9.944758 9.727201 9.761721 TCGA-B6-A0IG 50 1 4456 NA breast stage iib t2 n1b m0 female 1994 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino 1 2 4 NA 7 2 2 2 6 2 NA NA 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 1.733986e-07 32.258064516129 19.3548387096774 0 38.7096774193548 9.67741935483871 9.8685902 8.7313713 11.2129182 8.6038474 7.6706506 9.0742188 9.6841872 9.8652665 10.2147848 13.6895664 9.9899654 11.0634862 0.2978370 16.7591053 2.7572153 9.9411910 6.9912724 8.7653912 8.2736338 12.9333905 3.2046729 14.2658225 3.0526767 9.3832582 10.8813387 7.1306756 3.2977930 10.1191611 10.0966625 1.7572366 6.9488379 6.2921394 -0.7022803 4.3638719 9.5698323 9.7536266 9.3332721 9.3852485 9.5651577 10.9580045 2.5457213 10.4167268 14.2960236 9.9088474 9.7370972 10.3114574 10.8359747 4.4063122 2.8213429 8.1834820 9.9519743 NA 10.9768259 7.1147689 4.1051417 3.3852516 10.3373903 12.0876250 10.4863746 11.3535765 12.5319296 7.1926035 10.9461434 10.3090794 10.9717573 10.2395670 3.9702095 10.8974662 11.8558477 -1.7022803 10.1956312 8.9225811 3.9145550 3.5457090 10.5756543 9.7613100 9.5901074 9.5133188 0.2978370 11.5108900 12.7079058 11.9729710 10.3132008 9.4430811 0.02384700 0.00734350 -0.70775000 -0.70236000 0.04457400 -0.73345000 0.02006300 0.02300500 0.00208050 0.00208050 0.71321000 -0.00553750 0.01768400 3.65690000 1.27340000 -0.71239000 -0.00622860 -0.70550000 0.00972760 0.02960600 0.00569190 -0.73372000 3.65690000 1.21430000 -0.05064100 -0.05064100 -0.05064100 0.00235810 -0.71649000 -0.70082000 -0.01202400 -0.70756000 -0.71533000 0.01112100 -0.70621000 -0.70109000 0.00241250 0.02904400 0.02188400 0.00027728 0.00083195 -0.71203000 0.03129500 0.02132300 0.00000000 0.00000000 0.01419000 0.01419000 0.01349200 1.20290000 -0.71933000 -0.71933000 -0.70729000 -0.60119000 -0.04156700 0.01838300 0.01014900 -0.00346270 -0.01144400 -0.01064600 -0.73372000 1.44500000 -0.04480900 -0.05064100 -0.05064100 -0.00124730 0.01796300 -1.14820000 -0.73766000 0.000 0.000 -0.704 -0.704 -0.689 -0.689 0.000 0.000 0.000 0.612 0.000 -0.705 0.000 0.000 0.000 0.000 0.000 -0.701 -0.701 0.000 0.000 0.000 -0.732 0.000 0.000 -0.708 -0.708 -0.692 0.000 -0.706 -0.706 0.000 0.000 0.000 0.000 -0.439 0.000 0.000 0.000 -0.205 -0.205 0.000 0.000 -0.704 -0.704 -0.689 -0.689 0.000 0.000 0.000 0.612 0.000 -0.705 0.000 0.000 0.000 0.000 0.000 -0.701 -0.701 0.000 0.000 0.000 -0.732 0.000 0.000 -0.708 -0.708 -0.692 0.000 -0.706 -0.706 0.000 0.000 0.000 0.000 -0.439 0.000 0.000 0.000 -0.205 -0.205 9.0816025 NA 4.9982271 10.7953881 15.5849119 5.8592639 11.3974623 8.3960284 9.2464888 0.2978370 11.5436355 10.5599746 3.1051417 0.6197417 2.3852377 7.7448688 4.5266072 10.5869401 11.8022324 10.4338156 9.6191501 3.2046729 7.7653915 10.5263038 5.9488368 5.4167283 0.8827604 NA 9.6657465 5.2635716 5.6641073 7.1051406 5.8827482 10.0908241 10.1700759 1.7572366 9.0742188 NA 6.0324954 11.7531130 7.9737427 7.9216672 -0.7022803 2.2977784 7.4449908 -0.7022803 3.7240499 -0.1173178 3.9416416 5.8676420 2.5457213 9.9781453 1.8827604 7.1588722 10.9664491 9.7230016 3.9416416 10.0295291 13.3742256 6.6287022 1.9982316 2.9416510 10.6586328 3.3852516 NA 0.6197417 -0.1173178 13.420080 6.912495 9.152654 16.759105 10.463321 10.845162 12.933391 11.669835 8.423199 10.508153 12.677841 9.598710 8.183482 9.096258 1.882760 7.867641 10.947716 11.413317 13.368745 5.192605 13.254116 8.436058 5.573911 9.262127 10.788210 10.545126 5.320152 8.898628 9.989965 4.385252 0.297837 10.552814 7.379935 9.105060 9.723002 10.593842 11.065970 8.299194 10.343887 8.754140 5.628704 12.865865 9.333272 11.038621 11.211984 10.642359 9.701863 9.754654 10.814225 8.300601 2.297778 8.996108 6.778778 9.951974 6.809538 10.976826 7.460177 10.600425 10.337390 7.260682 13.407168 9.942543 9.667383 12.952478 11.718535 3.155765 NA 9.286470 10.316681 9.727715 TCGA-B6-A0IH 81 1 3418 NA breast stage iiia t3 n1b m0 female 1995 NA yes infiltrating lobular carcinoma 25 white not hispanic or latino 2 2 2 NA NA NA 3 3 4 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 27.2727272727273 9.09090909090909 0 27.2727272727273 36.3636363636364 10.796576 10.138037 11.870798 9.545421 8.264627 8.985185 10.221453 9.621099 10.043400 13.330125 11.305132 10.509977 2.450274 12.761289 3.238756 10.092151 7.918610 9.040681 10.723423 12.823228 1.312781 13.903955 7.663257 9.378225 10.667671 2.897724 NA 9.643668 8.188049 4.120111 8.460474 7.486687 NA 5.705077 10.357701 10.051528 9.461491 11.157309 9.621099 11.585157 7.378850 10.542540 14.293150 7.143776 9.824513 11.146283 10.985185 5.836323 5.056922 9.241130 11.655279 NA 11.221753 7.109773 5.238760 5.078294 10.360429 11.826685 10.511451 12.103923 12.765001 8.982354 11.291471 10.921577 11.577437 11.129104 5.056922 11.702069 12.153695 7.387437 10.332351 9.257619 4.547875 4.921570 10.644573 10.068315 9.982354 9.833182 4.348381 8.585157 12.760257 13.439206 10.317823 10.228042 0.9645200 0.9624700 -0.2007400 0.0095883 -0.2029700 -0.0072632 0.0000000 0.0000000 0.2891300 0.2891300 0.3782500 0.3323800 -0.0575200 0.1206400 0.1306600 -0.0653130 -0.1515700 -0.1515700 -0.0678600 -0.2012400 -0.4280000 -0.2550300 -0.2550300 -0.2550300 0.2347300 0.2347300 0.2342600 0.3659200 -0.2036100 -0.2036100 0.1895000 -0.2007400 -0.2013700 -0.2029700 -0.0072632 -0.0072632 0.0000000 0.0000000 0.0000000 0.2197500 0.2197500 0.2891300 0.1901000 0.1901000 0.1901000 0.1901000 -0.0575200 -0.0647770 0.1206400 0.1306600 -0.0653130 -0.0653130 -0.1515700 -0.1515700 -0.1515700 -0.0678600 -0.2062700 -0.2052300 -0.4098100 -0.4361500 -0.2550300 -0.2550300 0.2051900 0.2347300 0.2342600 0.3751200 0.1758700 0.2228300 0.2454400 0.332 0.332 0.121 0.000 -0.152 -0.152 0.000 -0.206 -0.410 0.227 -0.178 -0.255 -0.255 0.205 0.205 0.235 0.235 0.761 0.965 0.366 0.366 0.436 -0.414 -0.213 -0.023 -0.201 0.000 -0.203 -0.203 0.000 0.000 0.000 0.000 0.220 0.220 0.289 0.289 0.190 0.190 0.000 0.000 0.332 0.332 0.121 0.000 -0.152 -0.152 0.000 -0.206 -0.410 0.227 -0.178 -0.255 -0.255 0.205 0.205 0.235 0.235 0.761 0.965 0.366 0.366 0.436 -0.414 -0.213 -0.023 -0.201 0.000 -0.203 -0.203 0.000 0.000 0.000 0.000 0.220 0.220 0.289 0.289 0.190 0.190 0.000 0.000 7.12525847 6.14057827 6.23876011 10.46960163 10.62246379 7.23781034 11.58024910 10.14687716 8.73534650 4.60554174 11.83062632 11.47328957 3.57579638 0.57579638 3.74572138 8.21724429 4.07829387 10.42128453 11.62700345 10.89018895 9.24821982 5.63468910 7.24349772 10.03454286 7.93334661 6.55307476 NA -0.00911773 11.09641321 8.45231126 7.25292651 7.49862665 7.52610716 9.81419919 10.99188828 5.62018756 8.29004005 NA 8.72215108 12.74801363 7.64904344 8.51243234 -1.00926292 2.45027429 8.10717574 1.31278133 4.71875068 -0.00911773 6.17074029 4.07829387 3.23875629 10.12268902 -0.00911773 10.09935649 10.53531349 9.75321407 6.32174955 9.84180019 12.26782875 9.30711358 3.31276681 4.94502706 10.98093598 -1.00926292 NA -1.00926292 3.16075888 11.818840 4.968114 8.207578 12.761289 10.207578 10.716198 12.823228 11.171984 8.987433 11.099356 13.188049 10.235196 9.241130 10.539654 -1.009263 6.677332 12.842776 11.5997798 11.3799256 7.0622944 13.6464164 8.7606697 7.1806561 9.1507033 7.3911138 11.0490403 7.1252585 7.7356657 11.3051320 6.8173802 2.9908278 10.6238272 8.6073810 5.9605349 12.4419143 11.0197740 10.5241617 7.9880115 8.1905042 12.4603466 8.1657577 12.3133940 9.4614909 10.3980998 9.7672650 11.5628216 10.7945596 10.0034565 10.8209510 9.1239742 0.5757964 9.0777776 7.8668579 11.6552793 8.4379152 11.2217531 7.6773328 10.8038115 10.3604294 7.0782949 13.9906999 9.5578374 10.3245465 12.7904172 11.1143068 2.5757964 2.8977245 10.4270230 10.1849733 10.0649735 TCGA-B6-A0IJ 42 0 NA 7106 breast stage iib t3 n0 (i-) m0 female 1995 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 3.433293e-06 6.589149e-07 9.16666666666667 25.8333333333333 5 35 25 8.9123394 8.7961626 11.4026436 7.5594482 8.5711906 8.9771628 9.2891068 10.6445132 13.8566745 12.0431322 9.9819691 10.2277062 0.1650436 11.1545574 2.8088381 10.6071514 5.5743771 7.9479834 9.2195899 6.1365298 -1.8349564 9.1586317 9.0057635 9.8155886 10.8508293 6.8374110 1.1649793 10.7445371 10.8760071 -1.8349564 9.8178304 6.6528249 NA 6.5743771 9.5263811 10.1904712 8.9240414 9.8636901 8.6826548 9.8440256 3.8374084 7.7760105 15.6632605 7.7653630 10.1275200 10.4466257 10.0793706 3.3744414 -1.8349564 8.9962927 10.8738538 -1.8349564 10.5159247 5.2524497 7.5048357 7.0838484 10.1133527 12.0789968 10.1023593 10.6897720 12.8100246 7.1104290 10.8794456 10.6620015 11.7057189 11.0946137 4.7796957 11.7849761 8.9389488 0.7499204 10.7988889 8.9496204 2.8117176 5.1191818 11.9872575 10.0711244 10.9079264 9.0361206 0.1650436 5.2310752 12.5090733 11.8870459 9.8484187 9.0252966 1.0407000 0.1980100 -0.2895200 0.4425700 0.0680910 0.8550200 0.1885900 -0.2790600 0.3424200 0.3424200 1.3571000 1.0767000 -0.2843000 0.0000000 0.0000000 -0.0354480 0.5266600 1.6974000 0.1122900 -0.2709300 0.1942100 -0.2742800 -0.2742800 -0.2742800 0.1969500 0.1969500 0.1969500 0.6016000 -0.0863860 0.3330200 -0.0253460 -0.2883400 -0.3175100 -0.9660300 -0.2924800 0.4473200 0.1885900 -0.2803700 -0.3074500 -0.2877400 -0.3267000 -0.5924400 0.3228600 -0.9126600 0.8388400 0.0856540 -0.2843000 0.6366400 -0.2960300 0.0000000 -0.3007500 -0.3007500 -0.1750000 -0.2801300 -0.0048461 -0.0264410 -0.2758300 -0.2758300 -0.2892800 0.6073800 -0.2742800 -0.2742800 -0.0042929 -0.2686500 0.1969500 -0.2151500 -0.0471240 -0.2825100 -0.0035145 0.450 0.450 0.000 0.000 -0.248 -0.248 0.000 -0.271 -0.281 -0.240 0.000 -0.274 -0.274 -0.242 0.000 0.197 0.197 -0.256 0.626 -0.215 0.552 0.000 0.000 -0.108 -0.323 -0.288 0.061 -0.304 -0.304 0.825 0.000 -0.279 -0.279 -0.293 0.003 -0.592 0.000 0.339 0.339 0.000 0.000 0.450 0.450 0.000 0.000 -0.248 -0.248 0.000 -0.271 -0.281 -0.240 0.000 -0.274 -0.274 -0.242 0.000 0.197 0.197 -0.256 0.626 -0.215 0.552 0.000 0.000 -0.108 -0.323 -0.288 0.061 -0.304 -0.304 0.825 0.000 -0.279 -0.279 -0.293 0.003 -0.592 0.000 0.339 0.339 0.000 0.000 8.2800293 NA 6.8303213 10.0241320 11.3799116 6.5915014 10.8933312 9.7957213 9.0108047 -0.8349564 13.3756568 11.8155761 1.6244285 NA 3.2093754 8.1465529 4.1649874 11.9884522 11.4418368 10.9962927 9.6320815 2.0718656 9.3578946 10.1451250 7.9430627 4.3938074 -1.8349564 -0.8349564 10.2377880 0.9723250 7.0384296 9.0808650 4.4129102 10.0153247 10.4644797 4.0957219 10.7014756 2.9723434 6.1249877 13.7704939 8.2708938 6.4081599 -0.8349564 -0.2499938 8.2813296 2.6244285 2.1649793 NA 7.1734143 1.6257381 5.6488019 10.9321354 -0.2499938 9.2832778 10.5799349 10.0311053 6.9561484 10.4710472 13.6795454 8.6325910 7.8303213 4.8088432 10.1550894 2.0718656 2.6885385 -0.2499938 7.5679971 12.821392 9.553003 8.712844 11.154557 10.298449 11.476166 6.136530 8.408159 8.604608 10.719574 13.736620 12.700990 8.996293 7.301976 4.252446 7.107500 11.248132 11.3199618 11.8445755 5.5912515 14.4155419 9.3045368 8.1776099 9.5669316 5.9787677 10.8362457 7.8016101 6.0897990 9.9819691 4.4129102 -0.8349564 10.4241402 9.6310619 10.7229971 8.1133525 11.7808450 10.2212845 8.1465529 9.2852233 8.9994566 8.4469154 10.7130656 8.9240414 10.4826807 10.1472661 10.9925266 11.7367381 11.2782393 11.2122798 8.4457561 NA 9.4609897 6.1593386 10.8738538 9.9148549 10.5159247 4.3744414 11.5540790 10.1133527 8.0981005 14.9525055 11.0899835 10.7515908 12.8169901 10.8151397 5.6325910 0.4868688 10.4888847 8.8903518 9.2524483 TCGA-B6-A0IK 63 1 571 NA breast stage iiib t4 n1 m0 female 1994 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 3 2 3 2 5 3 2 6 4 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.947777e-06 1.109751e-06 16.6666666666667 64.1666666666667 0 14.1666666666667 5 9.1807715 9.4464380 11.5532464 9.4642566 7.4666157 9.7110652 10.6809032 10.7199921 11.1462339 14.6019479 9.7367050 10.9122663 NA 12.9470034 3.1161152 9.5311561 4.7010832 9.1605126 7.2590766 12.7782528 0.7941871 12.1117915 5.9905873 8.8530840 11.3223189 9.3941034 2.9096771 9.2873788 12.7660932 3.0165855 8.0703147 8.3436543 1.7941871 4.6015480 10.1458659 10.4416488 9.1950700 10.0964486 10.0085096 11.0381578 10.5618232 9.7503246 15.4305130 6.6817163 10.6542428 10.4452422 10.0656535 3.7941871 4.2966923 8.8781129 11.3903802 NA 10.8616248 4.2092272 5.0421190 4.2536187 10.7254205 12.1802326 10.0357765 11.5474072 13.0156769 6.5579568 10.4713228 9.7229555 11.0868955 11.1954255 4.3791496 12.2991749 10.0672090 NA 10.1964920 9.0842094 2.2092350 4.4946332 11.5297465 10.0757342 9.6542427 9.6448982 2.5311444 9.4677940 11.9135639 11.5024122 10.0531490 9.1575953 -0.00678130 -0.00207840 0.00416320 0.52660000 -0.51943000 0.04273200 0.01056400 0.01056400 0.00083195 0.00083195 3.65690000 -0.52818000 -0.52669000 -0.52010000 -0.51948000 -0.51948000 -0.12317000 0.00736090 0.02188400 0.00583090 0.01474900 -0.54492000 -0.55547000 3.65690000 -0.04373700 -0.04373700 -0.05576900 0.00917050 -0.00221680 -0.00678130 0.00000000 -0.55357000 0.02300500 0.03425400 0.01237600 0.01237600 0.01056400 0.01056400 0.00333070 -0.02059800 0.01461500 -0.51764000 -0.51537000 -0.51537000 0.48372000 0.48372000 -0.52669000 -0.53154000 -0.52010000 -0.52010000 -0.51948000 -0.51948000 -0.12317000 0.00736090 0.00736090 0.01167900 0.00583090 -0.00871460 0.01112100 0.00013863 -0.54492000 -0.05172100 -0.51362000 -0.04373700 -0.07172200 -0.55897000 -0.21775000 0.01880300 -0.00636680 -0.528 -0.528 -0.520 -0.520 -0.123 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 -0.508 0.000 0.200 0.000 0.000 0.000 0.000 0.445 -0.517 -0.517 0.000 0.000 0.000 0.000 0.000 0.000 -0.492 -0.492 -0.515 0.484 -0.150 -0.150 -0.528 -0.528 -0.520 -0.520 -0.123 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 -0.508 0.000 0.200 0.000 0.000 0.000 0.000 0.445 -0.517 -0.517 0.000 0.000 0.000 0.000 0.000 0.000 -0.492 -0.492 -0.515 0.484 -0.150 -0.150 9.6666089 5.6521710 4.9641167 9.9938628 12.5629262 7.0213409 10.9014076 8.4896971 8.8727860 0.2092662 12.4070590 11.7616329 3.2966923 1.2092038 2.2092350 7.4235471 3.6686638 9.7657340 11.2218525 10.2460884 8.7030834 NA 9.7298466 9.4162423 6.3589746 4.7010832 6.8239378 3.2966923 10.2315957 5.7941897 6.9641156 7.5755498 5.4380466 9.6260255 9.8825370 4.2092272 8.4571555 NA 7.2536225 12.6769609 7.2966905 11.3561148 0.2092662 2.2092350 7.3891374 0.7941871 2.2092350 0.2092662 6.4089003 3.0186342 3.8530874 12.1308830 3.3791496 10.4332297 10.9653673 10.1273458 6.2536225 9.8467584 12.4058301 7.8494727 3.3791496 3.5311569 10.4192905 0.2092662 0.7941871 1.2092038 3.4571609 12.214677 7.067208 8.299340 12.947003 10.589689 10.454186 12.778253 10.675814 8.670708 10.392863 13.252084 10.290045 8.878113 10.839040 NA 10.546850 10.620209 11.4657315 13.0011031 5.0918691 13.9175575 9.2134484 7.2148524 8.2993404 9.0872788 11.2315403 5.6521710 7.5130090 9.7367050 8.0734143 1.7941871 11.1717625 8.2645106 7.4387677 12.2120430 10.7866568 10.9657843 7.7866565 9.6004716 10.0880452 6.7483874 9.9916283 9.1950700 10.5815489 9.1488073 10.9893576 9.7714703 10.7440172 11.1355240 9.0872788 0.7941871 9.2462256 6.8385850 11.3903802 6.9971309 10.8616248 6.2204557 11.7894865 10.7254205 7.3589746 14.2649341 11.0834409 10.7628573 11.8144760 11.0768928 2.6686638 NA 10.2927073 10.0849774 9.7050830 TCGA-B6-A0IM 75 1 3873 NA breast stage iib t3 n0 (i-) m0 female 1997 NA no other, specify 0 black or african american not hispanic or latino 1 1 5 NA NA NA 1 1 5 4 NA NA 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 5 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.427581e-07 36 16 0 40 8 11.4897395 9.8971490 12.2773781 10.2200428 7.6133563 8.3798128 10.2404933 9.6610726 8.8563231 13.0561643 11.8680766 10.3702749 -1.9099596 13.3000849 4.1121580 9.3786601 6.3089633 9.0227470 7.3495369 13.0600348 6.1396434 14.2086338 3.2597244 8.3281987 11.3524762 7.3234133 -0.9102307 7.0264316 9.5579090 0.8971630 9.2427125 7.8760638 -0.9102307 3.7336472 10.7773885 10.1722757 9.8147342 10.9299819 10.5031575 12.2963506 2.9477784 11.1652732 14.9196778 8.7539481 10.3777950 11.0634914 12.4848595 4.7480050 NA 9.3047202 10.9216950 -0.3251778 11.1142412 5.6289514 4.4296427 5.8177153 10.1256241 12.2122985 10.2025594 12.3983464 12.9835222 8.1314532 11.5038186 11.3396586 11.5225969 11.5771317 6.2647203 11.5134352 13.3858858 NA 11.0577408 9.3826908 2.3046863 4.1558868 10.4243467 10.5218139 10.3694046 10.4997153 1.6747770 5.3186133 11.6032749 9.7318458 10.9407622 9.5726021 0.00555290 -0.02041200 -0.00498440 -0.02054900 -0.02794500 -0.01794100 -0.01409000 -0.01409000 2.94000000 2.93310000 0.81866000 0.00194180 0.00194180 -0.01503200 0.05209900 -0.84579000 0.00805670 -0.00339880 -0.01354000 -0.00802440 1.59150000 0.03510000 0.03552400 0.03552400 0.04117500 0.04117500 0.04939800 0.01796300 0.00555290 0.00555290 0.00138680 -0.02054900 -0.01470500 -0.02794500 -0.01794100 -0.01794100 -0.01409000 -0.01409000 -0.01862800 0.00013863 0.80772000 -0.85829000 -0.01100300 0.00249690 0.00249690 0.00249690 0.00194180 0.00194180 0.02721600 -0.84865000 -0.84579000 -0.01216200 0.00805670 -0.00339880 -0.00339880 -0.01574100 -0.79878000 0.00000000 0.78659000 -1.07680000 -0.85698000 0.03552400 0.79142000 -0.78707000 0.04117500 0.01796300 -0.02041200 0.04471500 0.04471500 0.000 0.000 0.000 -0.819 0.000 0.000 0.000 0.000 0.820 0.000 -0.843 -0.819 0.000 0.808 0.808 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.788 0.788 -0.108 0.750 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.819 0.000 0.000 0.000 0.000 0.820 0.000 -0.843 -0.819 0.000 0.808 0.808 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.788 0.788 -0.108 0.750 0.000 0.000 0.000 0.000 8.49918497 -0.91023069 4.85797602 10.22774577 10.87892010 6.74192264 10.86848722 8.59363949 8.83276884 -1.90995958 12.14244701 11.28444166 3.04399186 1.54922558 4.25971690 8.33534658 4.08979473 10.87871622 10.91654113 10.49147354 9.36824343 0.08976931 8.99367578 10.72165317 5.91634288 7.07278753 3.99668702 NA 10.38154036 7.06133771 5.58964066 7.83966361 4.11215798 10.06196975 10.18749708 2.89714360 8.60746348 NA 6.69712465 12.59504738 7.38900229 7.39357494 NA 0.67473181 7.75157218 NA 2.67475440 -0.32517782 3.41172452 5.56073635 0.41175163 9.86663834 NA 5.89714844 10.30532705 9.53221934 1.99667798 8.13418808 12.26853671 7.53687739 5.51605928 2.79022988 14.58842515 3.79022988 0.08976931 4.41172452 0.41175163 14.9152898 6.2190775 8.4004069 13.3000849 9.7732274 9.8346280 13.0600348 15.2786340 8.0356624 11.1187361 12.6719360 10.2465092 9.3047202 8.4637467 -0.9102307 6.8906935 12.2357262 11.2754439 12.8083804 7.4949356 14.1882366 8.9258443 4.0897947 9.1565559 9.5975887 10.6975867 5.5244210 4.0205289 11.8680766 5.0555775 2.7902299 11.2528147 8.4917401 7.8157394 11.5102807 10.3731718 10.5335147 7.6934207 8.8825844 14.3202461 3.7902299 11.5007038 9.8147342 9.7484518 8.7919667 11.6648605 9.0827324 11.0247749 10.6506045 9.1079943 -0.9102307 9.0519455 8.6598871 10.9216950 1.5492256 11.1142412 7.6366884 10.7921832 10.1256241 7.2496653 13.9159204 10.3113812 9.1672774 12.8819743 9.6123755 -0.9102307 2.7214820 10.7995241 10.4434923 10.0436268 TCGA-B6-A0IN 45 1 2573 NA breast stage x t1c nx mx female 1996 NA no other, specify NA white not hispanic or latino 1 2 3 NA NA NA 1 4 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 3.121176e-07 22.7272727272727 18.1818181818182 0 40.9090909090909 18.1818181818182 9.5860817 9.2784650 11.0048759 7.5556705 8.6382328 8.9069474 9.5347283 10.2266061 10.0414846 13.8755632 9.8637926 10.5022653 1.2373802 14.1575947 2.8223223 9.4776678 4.4389848 8.6141301 7.7324090 12.7952958 0.9580631 12.8027413 0.9154062 9.5358286 10.1514396 6.1538297 NA 10.9457477 9.9909045 2.3748447 7.2685719 6.9815148 NA 5.8102426 7.9570846 9.5565741 9.0702436 9.1739914 9.0778169 10.7114651 1.2373802 9.8659813 14.6078230 7.6524700 9.8342887 9.8783215 10.2619392 5.6019253 6.2552760 8.3666365 9.6141301 NA 10.9481599 5.6433454 6.2373534 5.5878510 10.2558320 11.7506863 10.2985897 10.9635717 12.0086779 7.6019260 10.8656168 10.0759271 10.1728133 10.0101629 3.0853567 11.3424764 11.8236304 -1.0846703 10.2513740 8.4814794 4.7227829 5.3416905 10.2435394 9.2630469 9.5966639 9.3717799 2.9154253 9.4497283 11.7223778 11.1547256 9.6339582 9.1478465 5.4259e-01 5.4259e-01 -8.8526e-03 -8.8526e-03 4.8579e-03 8.0745e-02 5.5071e-01 3.1910e-03 1.0285e-02 1.0285e-02 5.6045e-01 5.3397e-01 -1.3858e-03 -7.7830e-03 -6.9195e-03 -6.9195e-03 -1.6429e-02 -8.1624e-03 -9.7671e-05 6.5262e-03 -2.2881e-02 -6.1662e-01 8.2647e-01 -4.9695e-02 -2.8218e-02 -2.8218e-02 2.7351e+00 -1.0795e-02 -6.5050e-03 -6.5050e-03 -1.1887e-02 -8.8526e-03 2.8460e+00 -4.0162e-03 5.8081e-02 5.8081e-02 -2.6988e-02 3.1910e-03 -9.4046e-03 5.1228e-01 1.0674e+00 -6.0352e-01 2.7395e-03 1.1813e-02 1.9418e-03 -1.0831e-02 -1.3858e-03 -1.3858e-03 -7.7830e-03 -6.9195e-03 -6.9195e-03 -6.9195e-03 -8.1624e-03 -8.1624e-03 -2.7724e-04 -9.7671e-05 -6.6226e-01 -5.8140e-03 2.2725e-02 4.4411e-03 -6.1662e-01 1.5908e+00 8.1959e-03 -6.3953e-01 -7.9343e-02 2.6357e-03 -9.9802e-02 -6.0303e-01 3.1572e+00 0.529 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.531 0.000 0.000 0.472 -0.566 0.000 0.000 0.000 0.000 -0.574 -0.574 0.000 0.000 0.499 0.000 0.529 0.000 0.000 0.559 0.000 0.000 0.000 0.000 0.529 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.531 0.000 0.000 0.472 -0.566 0.000 0.000 0.000 0.000 -0.574 -0.574 0.000 0.000 0.499 0.000 0.529 0.000 0.000 0.559 0.000 0.000 0.000 0.000 8.24410025 1.91544441 6.41527192 10.55069013 13.00966811 7.22740031 11.09097500 9.33005773 10.09053828 4.58785101 12.91004406 12.05220193 8.73080874 1.50039417 2.50039417 7.50038779 5.25527411 10.16157218 11.42322009 10.49096466 9.18104042 4.12488227 7.45070072 11.21320151 8.32693636 8.66361823 3.77340563 NA 10.59578494 8.33959172 6.21004592 8.17045389 6.09533372 9.97407338 10.04599604 4.30774180 9.13822034 NA 7.27736924 12.00537241 7.66025908 10.31630484 0.50039417 1.91544441 8.86671020 4.86961975 5.20082604 1.23738016 6.58076206 5.53013631 3.95981651 10.48385668 -0.08451734 8.66529470 10.87034877 9.72920657 6.83428900 10.37229320 11.49379812 9.59226398 4.34168693 4.84616232 13.34234534 3.72278295 NA 3.00288251 0.91540617 11.9791778 6.4700146 9.1052501 14.1575947 9.9203481 10.7231828 12.7952958 12.1896580 8.6935026 9.7467326 12.7440578 9.7577758 8.3666365 8.5116151 0.5003942 6.8102426 10.9069473 10.840609 12.381757 5.237353 13.515276 9.027865 7.232838 8.773406 7.281747 9.457780 7.541135 8.320567 9.863793 7.312030 NA 10.503672 5.722780 6.175357 10.118162 10.654362 10.543871 7.837267 11.839496 8.471932 7.163353 11.081422 9.070244 10.441436 10.155620 10.225470 9.748315 10.135199 10.178695 8.450701 NA 9.742546 7.161548 9.614130 8.734008 10.948160 7.904110 11.129137 10.255832 7.387101 14.218314 10.693913 10.885531 13.185502 9.709029 7.124879 0.908198 9.543871 9.321631 9.460390 TCGA-B6-A0IO 66 0 NA 5042 breast stage iia t2 n0 (i-) m0 female 2001 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 4 NA 4 3 1 1 5 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 5.548757e-07 25 36.5384615384615 15.3846153846154 11.5384615384615 11.5384615384615 9.47619858 9.45674333 11.65151856 8.43907454 8.90878769 9.47819627 10.46179998 10.71430769 9.87986303 14.83709487 11.51612317 10.94799585 0.39604986 12.31518999 2.56596268 8.75469847 6.92742836 8.71006389 8.96874742 13.29162261 5.84725784 13.92379921 2.20338912 9.44588227 10.91322460 5.92742954 -0.01902419 9.74032097 10.05604318 1.39604986 7.70893005 5.75359919 NA 2.20338912 8.70552353 10.92889022 9.28479056 10.06315884 10.23091340 10.27294791 2.39604986 11.69009364 14.66526534 8.78020510 9.99363431 10.74643404 10.63803047 4.77108797 6.15759755 8.86365293 10.02494848 NA 10.26139400 3.44044730 4.54579543 3.68144927 10.54801520 12.23692357 10.87532239 11.25402831 13.09219984 8.48880459 10.53719656 10.02631442 10.11286678 10.75387417 4.68144927 11.76018198 12.18802414 0.39604986 10.60975912 9.04530344 3.92242623 2.91960705 10.99107168 11.21502888 10.94438762 9.85496653 7.32678450 5.09648536 14.39536473 10.72303851 10.67391589 9.16423167 0.3669600 0.8150000 0.0000000 -0.0133730 -0.1297500 0.4183700 0.2337000 0.2337000 -0.0042477 -0.0042477 -0.0046627 0.2058100 0.2318400 -0.2000800 0.2086000 0.2086000 0.6853900 0.1162400 0.1768400 -0.2884200 2.6131000 -0.6347800 -0.4426100 0.7670200 -0.2298800 0.4984500 0.4984500 0.3844100 -0.2137600 -0.6156300 0.2092100 0.0032793 -0.1407300 -0.1398000 0.4183700 -0.4232700 0.2101300 0.2337000 0.2337000 0.2341600 -0.6425200 -0.0042477 -0.9342000 -1.2929000 -0.6146700 -0.6371500 -0.6241400 0.2227300 -0.2000800 0.2086000 0.2086000 0.2086000 0.6853900 0.0944750 0.0944750 0.2132000 -0.4338400 -0.4338400 0.2453400 0.2238100 -0.6347800 0.4475400 -0.6148600 -0.6817400 0.4984500 0.4078300 0.2198000 -0.2265800 -0.2265800 0.228 0.228 -0.200 0.009 0.685 0.116 0.213 -0.434 -0.178 0.224 0.224 -0.635 -0.385 -0.615 -0.615 -0.230 0.269 -0.214 0.815 0.384 0.384 0.220 -0.227 0.000 0.000 0.000 0.000 -0.130 -0.130 -0.011 -0.429 0.234 0.234 -0.392 -0.619 0.000 0.000 -0.615 -0.615 0.000 0.000 0.228 0.228 -0.200 0.009 0.685 0.116 0.213 -0.434 -0.178 0.224 0.224 -0.635 -0.385 -0.615 -0.615 -0.230 0.269 -0.214 0.815 0.384 0.384 0.220 -0.227 0.000 0.000 0.000 0.000 -0.130 -0.130 -0.011 -0.429 0.234 0.234 -0.392 -0.619 0.000 0.000 -0.615 -0.615 0.000 0.000 8.38331117 2.20338912 3.75360454 10.67884614 11.87038703 6.31640102 11.03244534 6.87501945 9.29784185 -1.60384051 12.12704807 11.66336512 3.15093330 4.32678180 5.20340086 8.03629232 3.64397160 10.04170569 11.83717594 10.51596116 9.06138334 3.85548148 8.97724786 11.16836192 5.29086670 4.52532974 3.20340478 -1.60384051 10.06537534 5.36183151 6.99223706 7.92742895 5.92742954 9.97345257 10.79479103 3.25403463 9.04978812 -0.60405978 7.22577042 12.47561545 9.75634582 6.88790052 -1.60384051 -0.01902419 8.68260525 4.06847305 2.30293314 -0.01902419 4.37332804 4.77108797 1.20338912 10.66721854 1.85547151 6.13075793 10.89065295 10.13413955 4.91960705 9.83950899 12.38544182 7.07200394 4.20340478 3.20340478 10.35749702 2.20338912 NA 1.20338912 0.98097581 13.9726344 6.6814493 8.4294703 12.3151900 10.9281597 10.8054383 13.2916226 13.5418601 9.2995904 11.1444499 12.9961925 11.0647108 8.8636529 8.3282620 -0.6040598 7.7134601 11.4790280 10.6173324 11.6847692 7.2066188 13.7476743 9.1197081 5.6814493 9.1575986 8.7134601 9.7237459 5.8958939 8.6224597 11.5161232 4.9506364 3.3960499 9.9847619 6.5201692 7.6160628 11.9568578 9.2640982 10.3758298 8.5214607 8.8988792 11.1619550 4.1774076 13.6712334 9.2847906 10.2532508 10.3542375 11.2299257 8.2431045 10.6033667 10.2786904 9.2025970 -1.6038405 9.6448526 7.7579913 10.0249485 2.9196070 10.2613940 8.3647142 10.5802842 10.5480152 7.4458955 13.6683126 10.4291261 10.5877234 13.1980082 10.1396195 1.7179560 -0.6040598 10.2114306 9.5784418 9.1425618 TCGA-B6-A0IP 74 1 3926 NA breast stage ia t1c n0 (i-) m0 female 1997 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 3 NA NA NA 4 3 5 4 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.387189e-07 38.0952380952381 9.52380952380952 0 23.8095238095238 28.5714285714286 10.5055674 9.6890800 12.1506018 8.9130800 8.2111724 9.3753286 11.1278479 9.4927237 10.4549315 9.6619005 11.1525558 10.5369137 -0.2510236 13.3286021 2.8079113 9.5771476 6.9714033 8.7358014 11.3512460 13.1589324 1.7490193 13.7807411 6.2084431 10.1156976 11.0206687 4.4678272 -1.8359861 8.9454084 9.7248591 0.1640139 8.6827018 7.0405659 0.1640139 3.6876094 9.8342623 10.7090131 10.1105894 12.0204742 10.1363105 11.4159748 3.8919732 11.9986185 14.9372780 7.9870019 9.8142029 9.9038293 11.3228161 4.7339020 7.0000992 8.3339738 10.9480700 NA 10.8276068 5.4586707 5.6152603 4.2084392 10.3182339 12.0419079 10.9602911 12.9612542 12.9806323 8.6876105 10.8349261 10.9778619 11.5220130 11.3289556 4.6069929 13.2568471 11.5380013 -1.8359861 10.2607639 8.8015794 4.0232731 4.8505494 11.4911802 10.0413328 10.0716904 9.9371878 2.6876206 9.6993240 13.1225561 12.4782778 10.4296637 10.0278478 0.63335000 0.70757000 0.01992300 0.01493700 -0.00622860 -0.00512270 -0.00816240 -0.00816240 0.00319100 0.00319100 0.00319100 0.00374920 0.00374920 0.00638710 1.24050000 -0.00277070 0.00527490 0.00000000 -0.00926660 -0.00069303 0.01265500 -0.00304750 -0.00304750 -0.00304750 -0.00526100 -0.00526100 -0.00526100 0.01070300 0.01014600 -0.00471970 -0.00774820 0.01992300 -0.00622860 -0.00622860 -0.00512270 -0.00512270 -0.00816240 -0.00816240 -0.00816240 0.00208050 -0.00567570 0.00319100 0.00518520 0.00518520 -0.59468000 0.00444110 0.00374920 0.01293400 -0.00793730 0.00638710 -0.00277070 0.00847430 0.00000000 0.00000000 0.00000000 -0.00926660 -0.00069303 -0.00069303 0.01265500 -0.59876000 -0.00304750 -0.00304750 0.04301500 -0.00526100 -0.00526100 0.01070300 0.00471900 0.01558700 0.01153900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.178 -0.420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.178 -0.420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8124061 5.5649268 6.3289549 11.0639720 11.6028405 6.9670821 12.2862295 7.7018103 8.8477189 0.1640139 11.3945195 10.8822262 3.0709388 3.0220304 3.6876094 9.1065632 3.0709388 10.3652537 11.5426145 10.9404816 9.6234803 4.9969400 8.2368513 10.5077896 6.8115070 4.8364746 -0.2510236 -0.2510236 11.0834707 5.2301377 5.8079036 7.6738235 6.9355375 10.3936786 11.0834707 3.7787553 8.9608994 NA 7.6856494 13.0649155 8.9850253 7.2777905 -1.8359861 0.1640139 8.5595828 2.3339675 3.9969400 0.1640139 5.1864174 5.2199816 3.0709388 10.5130534 -0.8359861 8.4119761 10.7607043 9.8872829 5.3239212 9.9097230 11.9028798 7.2274436 2.7490193 3.5903146 11.2366837 0.1640139 NA 1.9714056 -1.8359861 14.685142 5.262080 8.538001 13.328602 10.342714 10.902774 13.158932 12.963786 9.528791 10.581110 13.089603 9.120425 8.333974 9.681226 0.485942 7.483721 11.068495 11.2313149 12.0255233 7.5303712 13.8185700 9.2751843 6.3637213 9.1513127 8.7695281 10.5564063 7.6111318 8.2084426 11.1525558 6.1808560 2.9714056 11.0259110 8.5787338 7.0776863 9.8479205 10.5955463 10.6423127 7.3035999 8.6111318 12.4400276 6.4540673 11.2169835 10.1105894 10.4134585 10.3445794 11.2287914 9.5633265 10.2053655 10.8224833 8.9560256 0.1640139 9.6023051 5.8463404 10.9480700 8.4972040 10.8276068 5.9454087 10.9992010 10.3182339 7.5197078 14.4785080 10.2630676 10.5617233 12.8885092 11.1325355 5.0829112 0.7489764 10.3722830 10.3646408 10.3479941 TCGA-B6-A0IQ 40 0 NA 4285 breast stage iiia t3 n1b m0 female 1996 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.144431e-06 4.161568e-07 24.4444444444444 20 8.88888888888889 24.4444444444444 22.2222222222222 8.9413687 9.5307257 11.9191935 7.7863304 8.7764962 9.0259808 9.3778122 10.2001425 9.1530329 12.0425905 10.9787306 10.7214315 3.2627639 11.5535075 2.0701145 7.3180511 7.4074267 9.5423792 7.5869493 6.9527669 NA 11.2238565 10.5011734 10.0600248 11.1209440 3.8774792 1.0701145 11.2069316 12.4003202 3.0176547 9.9307672 6.8552261 9.2191448 5.3071625 9.2968797 9.9289926 9.4897827 9.5154341 9.3429200 10.4837515 7.9440069 9.0498548 14.2306478 8.1982579 9.5142511 10.7668428 10.3571762 4.7705648 -0.7372061 8.7626146 10.1927667 -0.1523237 10.4099735 3.3071662 5.5106961 4.4525954 6.9316535 12.8309623 10.3469126 10.9795881 12.9227645 5.9281050 11.5868085 11.0715317 10.9976899 11.1503700 3.8774792 11.5782012 7.2989424 -0.7372061 10.2694453 10.0873297 5.0326739 3.2169670 9.4556778 9.8321497 10.4948897 8.4513574 1.4326922 9.5254507 12.2831409 12.5144729 10.6186703 10.8763279 2.4562000 1.5588000 -0.3938600 0.4196500 -0.4055000 0.2942100 0.0884030 -0.0321170 -0.4116800 0.0065262 0.5633000 1.0134000 -0.3980800 -0.0511810 -0.0071958 -0.0071958 0.2189900 0.0093098 -0.3967500 -0.3938600 -0.5382500 -0.3332500 -0.3332500 -0.3332500 3.6569000 0.2853300 0.1330200 0.1547200 -0.5059800 0.0391530 0.4194900 -0.3917400 -0.4055000 -0.4055000 -0.7389200 0.2820000 0.0884030 -0.0269880 0.0793030 -0.4217800 0.0151680 -0.4270200 0.3569200 0.3569200 -0.4174200 -0.1676400 -0.3980800 -0.4517500 -0.0511810 -0.0071958 -0.0071958 -0.0749600 0.0924600 0.0093098 0.0093098 -0.8336500 -0.3835800 -0.3988600 -0.8649200 -0.4010800 -0.3332500 -0.3332500 0.4747800 -0.3053400 -0.2837000 -0.0583270 0.4418900 -0.3937500 -0.3937500 0.271 0.271 0.000 0.000 0.000 0.000 -0.393 -0.394 0.000 0.310 -0.062 -0.333 -0.333 0.475 0.475 0.000 0.248 0.000 0.436 0.000 0.000 0.442 -0.394 0.000 0.000 0.413 0.413 -0.406 -0.406 0.294 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.357 0.357 -0.437 -0.287 0.271 0.271 0.000 0.000 0.000 0.000 -0.393 -0.394 0.000 0.310 -0.062 -0.333 -0.333 0.475 0.475 0.000 0.248 0.000 0.436 0.000 0.000 0.442 -0.394 0.000 0.000 0.413 0.413 -0.406 -0.406 0.294 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.357 0.357 -0.437 -0.287 8.1098260 NA 4.8774792 10.7774827 11.5825818 6.7491615 10.7921992 8.5987731 8.7043225 NA 11.4567559 10.6445279 4.6890307 NA 4.5846980 10.3565162 3.0176547 9.2457621 11.6002512 12.1090425 10.3365755 1.0701145 9.8178370 9.5756516 6.3765109 5.1575854 1.0701145 0.2627939 9.3978365 1.0701145 7.6443113 8.8259649 7.2571219 10.2023000 11.8269181 1.0701145 10.4102916 0.8477564 8.3739044 12.4714602 9.0988190 10.7245039 -0.7372061 -1.7374466 9.0498548 -1.7374466 3.3502285 NA 5.7626146 3.1696525 2.9066213 11.9873891 4.4525954 8.7566240 11.0019164 10.6189454 5.1935076 11.1649552 12.2104055 8.8163978 4.2627714 3.3071662 11.1178317 2.3502426 NA 0.5846739 5.9974776 13.2182514 9.1583438 7.9138205 11.5535075 9.7912226 11.7911006 6.9527669 8.9606050 9.4016804 11.0673030 14.6180509 12.1874884 8.7626146 8.7088180 0.2627939 7.7119175 10.2169649 11.3355711 11.2039996 4.6026172 13.5440800 8.4903603 9.5499038 10.9147172 8.6942663 10.4214256 5.9492688 4.8626795 10.9787306 11.0431033 -0.1523237 9.9182993 10.4682564 9.0083505 11.4075862 9.5118821 9.9431281 8.2429083 9.4301868 6.2343116 6.6721594 11.4785761 9.4897827 10.2198707 10.8682481 11.8430272 10.8493739 10.1507507 11.0153583 8.4538278 NA 9.1829428 5.5388920 10.1927667 8.9129229 10.4099735 3.7863350 11.3095090 6.9316535 7.8941824 15.2411439 9.8192746 10.5186824 11.9839746 12.2193263 2.4326922 -1.7374466 9.7129489 8.7262931 9.2592421 TCGA-B6-A0RE 61 0 NA 7777 breast stage x tx n0 (i-) m0 female 1989 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 3 4 4 NA NA 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.323542e-06 7.282743e-07 12.3595505617978 37.0786516853933 5.61797752808989 24.7191011235955 20.2247191011236 9.8963687 9.0354645 10.8957846 8.2824982 9.1249226 8.8022465 9.7890941 10.6871071 11.2721821 13.1517166 10.0997792 10.1471830 0.2110122 11.6119154 2.0854926 11.6454904 6.8109482 8.5494008 8.6908162 6.2035027 NA 11.7604997 6.0607024 9.5313702 10.0875529 5.3942569 -0.3738880 10.1318850 11.3392451 2.7135419 9.1239253 7.8928597 1.9480027 3.9114711 8.6799994 10.6823724 9.2526950 10.5415794 8.4008607 10.5231626 0.9480027 7.5773578 15.0924367 8.2038046 10.3742663 10.4844430 10.3055536 1.9480027 NA 8.8367447 11.1479192 NA 10.9434860 4.0183938 4.9836275 5.5087170 8.6047837 11.6891314 10.0497146 11.8566944 12.3076413 7.1959292 10.7890941 10.2100963 10.6491347 10.2878516 4.2984970 11.6928354 8.3037931 2.3265086 11.3730076 9.7469593 3.0190792 4.1806651 9.6004879 10.3291118 11.0952065 9.7254213 1.9480027 5.6147570 11.3416065 13.0498459 9.9264260 9.5434454 1.4853000 0.4669100 0.1319900 0.0000000 -0.4563600 1.1115000 0.0349590 0.0397410 -0.1955000 1.9142000 0.6570000 2.1230000 -0.1892300 0.1127700 0.1108100 0.1108100 0.5493000 -0.4556500 0.4086100 -0.4525400 -0.4570200 -0.4258200 -0.4063900 0.9795600 -0.0271240 -0.0271240 -0.0271240 0.1963900 -0.3881700 -0.4533300 -0.4180500 0.1351000 -0.4585400 -0.4710200 0.0282000 -0.5473400 0.0349590 0.0349590 -0.4897400 0.7467000 0.2126400 -0.2885700 0.5560200 0.5560200 -0.1634500 -0.6863300 -0.1892300 -0.1892300 0.1190200 0.1108100 0.0400440 -0.0073339 0.0774300 -0.4556500 -0.4427500 -0.4770200 -0.8109600 -0.6177000 -0.4285500 -0.4216700 -0.4258200 -0.4063900 -0.3617000 -0.0271240 -0.0271240 0.3492500 0.2426400 -0.4137900 -0.3920400 0.508 -0.189 0.000 0.000 -0.456 -0.456 0.380 -0.618 -0.429 -0.431 -0.431 -0.406 -0.406 0.415 -0.316 0.000 0.000 0.569 0.569 0.196 0.196 0.243 -0.118 0.366 0.000 0.132 0.000 -0.469 -0.469 0.000 -0.437 0.000 0.000 0.247 0.247 0.462 0.657 0.393 -0.163 0.000 0.000 0.508 -0.189 0.000 0.000 -0.456 -0.456 0.380 -0.618 -0.429 -0.431 -0.431 -0.406 -0.406 0.415 -0.316 0.000 0.000 0.569 0.569 0.196 0.196 0.243 -0.118 0.366 0.000 0.132 0.000 -0.469 -0.469 0.000 -0.437 0.000 0.000 0.247 0.247 0.462 0.657 0.393 -0.163 0.000 0.000 7.8596932 NA 4.4589659 10.8629846 12.3290036 5.9549268 10.9750781 9.3172934 7.7684867 NA 12.6300305 12.1592583 2.7959955 NA 3.3265086 9.2636040 2.4334402 9.4156070 11.7380241 11.0609622 9.9709241 3.3809649 8.7148616 10.4589635 5.2699308 8.0752219 4.3809580 2.5329652 10.4668514 0.9480027 7.3160715 8.8476606 6.6921621 10.3691659 10.6474005 0.9480027 9.5479144 4.5087139 7.8428192 12.2427372 7.8952002 7.5597641 -1.3740750 5.0523376 8.3776175 3.2699308 2.3265086 NA 3.3265086 3.2110434 4.8355250 11.1301475 6.0855054 10.2180632 10.6536339 10.1844942 3.7553576 10.5370908 11.7959984 7.6062127 2.2110434 2.8740100 10.0824278 2.5329652 1.6260653 0.9480027 5.7959981 12.926599 8.805982 7.936686 11.611915 9.780202 10.790352 6.203503 9.567121 8.802247 10.803804 14.243340 12.016780 8.836745 8.410708 2.626065 7.948002 11.206568 10.197826 11.619896 5.591859 13.895601 9.260884 8.338600 9.248125 8.056526 9.146329 6.203503 4.815898 10.099779 11.276228 3.580266 10.051289 8.574441 8.095837 11.949973 10.801935 10.043399 8.190223 9.911476 7.998938 5.269931 9.904993 9.252695 9.870437 10.290521 11.093934 10.502974 10.594020 9.857295 9.049189 1.211012 9.861645 6.550885 11.147919 7.052339 10.943486 6.702889 9.900370 8.604784 6.439854 14.489389 10.257705 10.528449 12.301369 12.070830 NA NA 9.797250 9.177782 8.519375 TCGA-B6-A0RG 26 0 NA 2082 breast stage iib t3 n0 (i-) m0 female 1991 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 1 5 2 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352509e-06 3.121176e-07 10.4166666666667 20.8333333333333 10.4166666666667 33.3333333333333 25 9.50711852 9.54097209 12.23077471 8.44536751 9.30523276 9.14871629 10.01694879 9.60167553 9.48170944 14.51534370 10.96764877 10.50409299 0.60824151 13.24103332 1.02332633 7.08939222 5.08939222 8.04844219 9.91963520 13.41776547 2.72373329 14.86065968 3.41562348 9.82727235 11.78672262 8.22297502 1.34522604 7.81976397 10.25512396 0.60824151 7.56246148 7.87192556 3.77818755 4.11076412 9.50711852 9.55565877 8.64168836 11.40916518 9.13704492 10.66264346 1.02332633 11.89943597 14.22309012 7.98582316 10.42737990 11.12001789 10.83708394 4.77819280 7.67435472 9.44851859 11.22970670 0.02332633 10.98728256 5.06769894 3.60826517 3.77818755 10.37479422 11.94216600 10.40376386 12.79994141 12.75409130 8.40700725 11.14127050 10.09850786 10.92793741 10.06906249 4.23275284 11.82824044 11.46079477 1.34522604 10.34466719 9.06769679 3.03049500 2.72373329 10.66354770 10.92454680 10.17558760 9.70805132 0.02332633 9.04567067 12.71711639 10.18820964 10.35141665 9.54293899 0.8153200 0.8236000 0.0813220 0.7497500 0.1280000 0.0512450 0.9218900 -0.4062800 3.6569000 0.8617500 0.8617500 -0.0425170 -0.0425170 0.7394800 0.0214630 0.0523830 -0.0722740 0.0094491 0.9178400 -0.0036011 0.2313200 -0.4586400 0.4435900 0.9473100 -0.0328600 -0.0328600 -0.0328600 0.1022000 -0.8605000 -0.0374440 -0.0268510 0.0813220 0.0736900 0.1280000 -0.0473520 -0.0598070 0.9218900 -0.4062800 -0.4062800 -0.4364800 0.0478360 -0.8915800 -0.0343590 -0.0343590 0.0065262 0.0457080 -0.0425170 -0.3308700 -0.8823300 0.0214630 -0.8907700 -0.8966900 -0.1305700 0.0094491 0.0094491 -0.3922900 -0.0097610 -0.0011087 -0.5151700 -0.8632600 -0.4586400 0.4435900 -0.9640200 -0.0328600 -0.0328600 -0.0088526 0.0037465 -0.6665200 -0.6665200 0.000 0.000 0.000 -0.857 0.000 0.000 -0.375 0.000 -0.284 0.000 -0.863 -0.459 -0.015 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 0.000 0.000 0.000 0.000 0.128 0.128 0.000 0.000 0.000 -0.339 -0.436 0.000 -0.892 -0.030 0.000 0.000 -0.163 -0.163 0.000 0.000 0.000 -0.857 0.000 0.000 -0.375 0.000 -0.284 0.000 -0.863 -0.459 -0.015 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 0.000 0.000 0.000 0.000 0.128 0.128 0.000 0.000 0.000 -0.339 -0.436 0.000 -0.892 -0.030 0.000 0.000 -0.163 -0.163 8.69572801 NA 5.54686360 10.24126043 11.76645416 6.63211259 11.23336527 8.14525049 9.13964676 0.60824151 11.56995612 11.68193600 3.66715413 0.02332633 4.38085410 7.38085497 2.60826517 9.48784847 11.81812473 11.05293506 8.65992741 3.41562348 8.08669780 10.28069063 5.68151392 10.34917030 5.19322767 NA 9.63063317 7.02892713 7.15772891 8.27833144 8.21065479 11.25916142 10.46469083 0.02332633 8.47038597 NA 5.48273537 11.67860987 7.89366739 7.98908734 NA 5.69572941 8.67793876 6.48273375 4.11076412 -0.97681563 2.19323556 6.15485051 NA 10.21929003 -0.97681563 8.77317218 10.37534619 10.02541451 4.85619393 8.38085497 12.03225654 7.60450356 2.72373329 3.66715413 13.29666130 3.41562348 -0.97681563 NA 3.77818755 14.236154 5.652659 8.634328 13.241033 10.832669 10.880895 13.417765 12.835480 9.232756 10.310438 12.668286 11.123308 9.448519 9.897516 NA 7.974587 12.906328 10.9872826 12.3424104 6.8812841 13.3212199 9.6992598 3.8812829 9.3918092 8.7289351 10.3547796 4.8046628 8.3110153 10.9676488 6.4990358 2.8306610 9.9406748 6.6743547 7.1498528 9.8322669 9.4714192 11.0904009 9.7956173 8.4868270 11.0816328 3.5468698 11.7886117 8.6416884 10.3620391 10.2730088 10.7499467 9.0062963 10.7719150 10.6255376 8.8843897 0.6082415 8.7330930 7.0164105 11.2297067 4.4827321 10.9872826 6.0345305 10.9192566 10.3747942 6.6743547 13.3255847 9.7840228 9.5360432 12.5876905 10.6389324 0.6082415 0.6082415 9.7597046 9.9577308 9.1500072 TCGA-B6-A0RH 51 1 6456 NA breast stage iia t2 n0 (i-) m0 female 1991 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 2 4 NA 5 1 2 2 6 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.01673e-07 2.427581e-07 15.1515151515152 36.3636363636364 0 18.1818181818182 30.3030303030303 8.57371497 9.02697817 11.48891477 6.90705650 9.38330015 10.13637059 9.60016343 9.66270878 10.74335053 12.84570034 10.66698705 10.04728140 4.88623797 14.95528127 2.62989279 10.16776322 5.51525514 7.36986601 9.74595275 12.99743382 NA 13.70797439 7.17077934 10.34935886 10.97739606 6.41997534 0.04488368 7.41997450 11.35554799 0.04488368 8.15867734 7.52066896 NA 4.41416937 8.53143527 9.38032556 8.99037914 10.18874361 8.74883890 10.36535977 12.58828933 10.82875200 14.81268864 6.90994707 10.24746723 10.01599968 10.21067974 4.60971951 3.54743749 9.09205914 11.80620941 NA 11.57907599 5.14647194 4.78189997 4.54743749 9.82081989 11.91478608 10.56063510 11.59263311 12.64647391 8.06359893 10.18235338 9.01086374 11.04587417 10.55536975 2.45998236 13.82311505 11.21109831 0.45995614 10.61605576 9.40175397 3.69493589 4.76375149 11.32686526 9.97813412 9.15607094 9.24051254 6.84798939 9.45220293 12.90937935 12.15313297 9.95832332 9.77115335 0.96534000 1.03980000 -0.01354000 1.32580000 -0.58993000 0.02202400 0.00819590 0.00819590 -0.60632000 -0.60632000 0.61975000 0.02118300 0.02118300 -0.00526100 -0.00526100 -0.00526100 -0.60293000 0.50030000 -0.00097017 0.01796300 -0.02319100 -0.60709000 3.65690000 0.10143000 0.00416320 0.00416320 0.00416320 0.53309000 0.01698500 0.01516800 -0.59507000 -0.01354000 -0.58588000 -0.57881000 0.02202400 0.02202400 0.00819590 0.00819590 0.00819590 0.01153900 0.01153900 -0.60632000 -0.00705760 -0.00705760 -0.00705760 -0.00954260 0.02118300 0.02118300 -0.00526100 -0.00526100 -0.00526100 -0.00526100 0.23798000 -0.58176000 0.11418000 -0.00097017 0.01796300 0.01796300 -0.00798840 -0.59643000 -0.60071000 -0.60526000 0.03905400 0.00416320 0.00416320 0.47787000 -0.58912000 0.02707600 0.02707600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.564 -0.564 -0.607 -0.607 -0.574 -0.574 0.000 0.000 0.000 0.950 0.472 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.586 -0.586 0.000 0.000 0.000 0.000 0.000 0.000 0.013 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.564 -0.564 -0.607 -0.607 -0.574 -0.574 0.000 0.000 0.000 0.950 0.472 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.586 -0.586 0.000 0.000 0.000 0.000 0.000 0.000 0.013 0.620 0.000 0.000 0.000 0.000 9.07744010 -1.53993898 5.35479065 11.62315068 11.67398821 6.83878793 11.45202590 7.46870956 9.33937994 0.78190521 11.80482340 11.97652474 3.45996925 2.16040393 1.45995614 7.95582773 4.29286271 12.73427808 11.41925024 11.01023856 9.74421846 4.74537718 7.89876462 10.73172751 5.84367739 8.07652168 1.78190521 NA 10.09205914 5.08932865 6.91529979 8.66698696 7.79536306 11.44341706 10.69748150 1.04495360 8.59439888 NA 7.04493503 12.51661045 6.49889228 8.81642467 -1.53993898 0.04488368 8.83174933 5.11818528 3.26732605 1.26735601 3.31795522 5.39070895 1.04495360 10.93088574 0.45995614 8.27215013 10.80870086 10.15040723 4.01456061 9.32493276 14.94698054 7.21151650 2.26732605 4.31795522 9.66820708 3.81752094 NA 1.04495360 2.26732605 13.342756 6.167332 7.712638 14.955281 10.288109 11.507949 12.997434 11.602399 9.070075 9.279354 13.323965 9.187893 9.092059 10.997434 -1.539939 7.743061 10.718833 11.127084 12.635444 4.726760 14.211358 8.816425 5.817523 9.906022 7.664544 9.926253 5.717361 7.041173 10.666987 8.582801 2.629893 9.741323 4.935705 6.305150 11.276156 10.159979 10.855507 7.476781 9.925539 8.780773 5.305464 10.336540 8.990379 10.991598 10.394769 10.015041 9.112818 10.315231 10.735806 8.037401 5.951826 9.545186 8.948385 11.806209 6.089329 11.579076 7.267328 11.435821 9.820820 7.440113 14.394124 11.051261 10.704931 12.254896 11.242152 -0.539939 NA 10.007831 9.860319 8.835012 TCGA-B6-A0RI 44 0 NA 7126 breast stage iiib t4b n1b m0 female 1992 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino 1 1 3 1 NA NA 4 1 5 4 NA NA 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 1.040392e-07 27.2727272727273 18.1818181818182 0 27.2727272727273 27.2727272727273 10.2950444 10.0357083 12.3519519 9.7198618 8.5434394 9.2143237 10.7940554 9.5048980 10.7126717 13.5804467 9.9929753 10.1918275 1.6892097 12.3300721 2.5371967 9.9819763 5.8429989 8.4757910 7.7093410 13.1252814 2.7595820 14.1872709 4.7423081 9.7489717 11.4860453 4.3445445 NA 11.1872459 9.7888054 2.2741424 7.0002615 7.9141609 1.6892097 2.6891873 10.0254779 10.3882464 8.7488094 12.7766574 9.9727459 11.5956342 1.3672592 11.7222045 15.0263704 9.4125415 9.8348720 11.2234974 11.0892201 4.9819759 1.9522217 8.8440127 12.5487294 -0.6326289 11.4303244 7.3272688 5.6151926 5.2861308 9.7830082 11.8295131 10.6352236 12.4508289 13.0813510 8.5755007 10.9639222 10.2950000 11.4527389 11.4827979 4.5570914 12.4146460 12.4207682 NA 10.6419359 8.9681086 3.6186028 5.7248194 10.3924061 10.5481080 10.7482686 9.1754263 2.0677075 10.1288177 14.0233840 11.3436516 10.4623338 9.5157430 0.7717400 0.7717400 -0.0196020 -0.0196020 -0.0220710 -0.0190520 -0.0230300 -0.0230300 -0.0081753 -0.0081753 -0.0081753 0.0000000 0.0034558 -0.0128640 -0.0128640 -0.0128640 -0.8013700 -0.0102450 0.0157140 0.0016513 0.0151960 -0.7810900 0.0215900 -0.0022298 0.0148750 0.0148750 0.0148750 0.0696560 0.0097146 0.0097146 0.0279060 -0.0196020 -0.0220710 -0.0327830 -0.0190520 -0.0190520 -0.0087275 -0.0230300 -0.0230300 0.1503800 0.1503800 -0.0081753 -0.0034756 -0.0034756 -0.0034756 0.0187900 0.0034558 0.0034558 -0.0128640 -0.0128640 -0.0128640 -0.0128640 -0.8013700 -0.0102450 -0.0102450 0.0157140 0.0016513 0.0016513 0.0157140 -0.6194300 -0.7837100 0.0215900 -0.0077611 0.0148750 0.0148750 0.0520850 0.0052619 0.0478220 0.0469710 0.000 0.000 0.000 0.000 -0.801 -0.801 0.000 0.000 0.000 0.189 -0.417 -0.781 0.000 0.000 0.000 0.000 0.000 0.000 0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.801 -0.801 0.000 0.000 0.000 0.189 -0.417 -0.781 0.000 0.000 0.000 0.000 0.000 0.000 0.762 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.150 0.000 0.000 0.000 0.000 0.000 0.000 8.03437806 NA 4.85911978 10.98128606 11.50040871 7.17796661 11.43301915 8.93547920 8.49873754 NA 11.66532903 11.30350320 6.04674642 3.53719665 2.68918732 7.80813596 3.41165673 9.72151587 11.56094585 11.09178035 9.04938327 -1.63262893 8.61756480 10.26246299 5.23763255 8.05901018 3.95223105 NA 10.56325377 6.36726621 6.39517251 8.48880017 5.64339157 10.43176334 10.66704686 3.32146636 8.97921338 NA 6.43335509 12.54639804 8.54593131 6.89082847 0.95225901 1.36725922 7.87704175 -0.04781556 3.82670101 -1.63262893 2.17463012 5.80272831 -0.63262893 10.30243147 NA 6.98197592 10.45671694 9.73522717 3.53719665 9.11713580 11.85999594 8.49912356 0.36725922 4.01111989 10.70655973 3.95223105 NA 3.68919850 1.95222173 13.395000 5.355950 8.495261 12.330072 10.582799 10.560484 13.125281 12.870720 9.629949 10.013825 13.020447 10.287247 8.844013 9.542816 1.537197 7.566939 11.383204 11.26359890 12.18254970 7.13213776 14.17048594 9.08494282 3.85911481 8.66073827 9.23917174 9.99064959 6.40618629 6.16816665 9.99297529 6.42254923 1.53719665 10.96065759 6.20015709 7.62059374 12.27020681 10.17703464 10.69116563 9.37849363 8.65266861 13.61815701 2.95222173 11.56024656 8.74880939 10.39482697 9.96392215 11.29356246 9.82567307 11.22932258 10.75420674 9.84755179 -1.63262893 9.10100208 6.44408228 12.54872935 3.49655183 11.43032443 8.20804459 10.42998726 9.78300820 7.26208451 13.55519842 10.21079503 9.60746145 13.22456715 10.90787888 -0.63262893 -0.04781556 10.64803728 10.43301921 9.67389787 TCGA-B6-A0RL 60 1 2469 NA breast stage iia t2 n0 (i-) m0 female 1993 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino 1 1 1 2 2 2 1 1 1 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.5253703 9.5439240 12.0613193 8.7641059 9.0907233 8.1989174 10.3629554 9.2861134 7.7569412 13.3432284 12.6690895 10.3333273 1.1068843 13.7491281 2.5474992 8.9434165 6.4543783 8.5849625 5.5283775 13.5133480 -0.1154412 15.1829911 -0.1154412 9.4346090 11.2639011 5.5283775 1.2995377 4.4288459 10.3646397 5.3548435 8.5895792 5.2882441 3.0000000 0.2995963 9.7440576 9.8618026 9.7559147 10.5346770 10.1706955 11.1966494 4.4893824 11.7175446 14.0103936 6.8160480 9.8924844 11.9715436 11.1898246 3.3870178 2.8845198 8.6789388 10.2581130 -1.7004037 9.6388536 3.6918803 3.2995670 4.4080868 9.7163579 12.2778239 10.9467939 10.7226762 14.6581771 8.4249737 10.9147301 10.6110248 11.3350467 11.1344263 5.2868811 11.2374857 12.8156296 0.2995963 10.6041968 9.3009684 4.1362406 3.2537624 10.1745416 9.5924570 10.7831241 9.7041696 NA 5.3763772 11.1344263 9.4619517 10.6502232 9.8769891 0.4903100 0.5198300 0.0000000 0.0000000 -0.2519800 0.0405020 0.0037805 0.0037805 3.6569000 3.3137000 0.0362640 0.0192570 0.3243500 0.0117130 3.6569000 3.6569000 0.0019757 0.0019757 -0.8377500 -0.2680200 0.0255810 0.0717130 0.0717130 0.0717130 -0.9067300 0.0271100 0.0271100 0.9396100 -0.5200700 -0.5452000 -0.8033300 0.0000000 -0.2781600 -0.2519800 0.0253750 0.0253750 0.0037805 0.0037805 0.0386650 0.0080907 0.0259860 -0.9521100 0.0044751 0.0044751 -0.3673400 0.0233200 -0.6139100 -0.9025700 0.0209370 -0.9367200 -0.9223200 -0.9223200 0.0019757 -0.0026248 0.0117130 -0.8409400 -0.2680200 -0.2680200 0.0257060 -0.8957100 -0.9164400 0.0717130 -0.1874500 -0.8786600 0.0271100 -0.9206800 -0.0418050 -0.8719600 -0.8823100 -0.895 -0.895 0.000 -0.922 0.000 0.000 -0.841 -0.268 0.000 -0.012 -0.905 0.000 0.000 -0.187 -0.187 0.000 0.000 -0.520 -0.030 -0.074 0.940 0.000 -0.882 -0.803 -0.803 0.000 0.000 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 2.724 3.657 0.000 -0.358 -0.427 -0.105 -0.895 -0.895 0.000 -0.922 0.000 0.000 -0.841 -0.268 0.000 -0.012 -0.905 0.000 0.000 -0.187 -0.187 0.000 0.000 -0.520 -0.030 -0.074 0.940 0.000 -0.882 -0.803 -0.803 0.000 0.000 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 2.724 3.657 0.000 -0.358 -0.427 -0.105 8.9524052 1.8845198 2.4694953 10.4496248 11.6871738 8.3306825 10.9524053 5.1763228 8.6493503 NA 11.9564320 10.9855596 4.5663464 NA 4.8541503 9.0223678 3.1069178 9.0874628 12.0607998 11.0393409 9.9348249 2.2995670 8.0342696 9.1371882 2.2995670 5.9142703 -0.1154412 NA 9.7989079 7.6527073 1.7589853 7.1481837 6.3710221 10.7052814 10.5041314 -0.7004037 9.9733111 NA 5.4080834 11.2515734 9.7279205 3.5849625 NA 4.6571140 8.3163684 5.7258257 0.8845588 1.2995377 0.6215244 7.1189732 -1.7004037 10.4272323 -0.7004037 3.0000000 10.6694302 10.2202853 1.1068843 8.9280058 11.9089699 3.7589960 1.8845198 -0.1154412 10.9947886 -0.7004037 NA 1.6214776 NA 16.950071 7.017237 8.047753 13.749128 9.318456 10.977500 13.513348 12.484591 11.306796 10.637461 12.609747 10.332295 8.678939 8.209453 1.621478 7.777318 12.801895 11.8572633 12.4432624 7.1356108 13.4361081 8.4391115 0.8845588 10.2056993 9.7554012 11.0955248 3.9142679 8.9298274 12.6690895 8.6438562 NA 10.7422447 5.8994729 8.4290238 11.0722873 9.1528699 10.5964765 8.9728692 10.0321517 11.6434400 2.0000000 11.9128168 9.7559147 10.2907278 9.7073591 11.8814670 10.0850127 10.0000000 11.0801001 8.2094534 1.1068843 8.4898419 4.8231226 10.2581130 1.7589853 9.6388536 1.7589853 11.4176903 9.7163579 7.9897152 13.2348580 10.0829678 9.2739748 12.2290036 9.8023921 -1.7004037 3.2064557 10.5474878 9.8250811 10.4359107 TCGA-B6-A0RM 57 1 2373 NA breast stage x tx nx mx female 1993 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino 1 1 3 1 2 2 1 1 3 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.2990904 9.2966974 11.7982580 8.9077692 8.4645805 8.6659054 10.9890691 9.0155054 8.7169151 12.9766018 8.2052371 10.5162354 2.7992531 11.4937766 3.0008834 9.2463278 6.1915627 8.5634526 10.2483932 13.3770982 4.0319068 14.3383549 3.8348730 10.0864583 11.9375164 4.4545971 0.7992531 7.5698359 9.0641561 -1.5228408 8.7487795 4.4996865 1.2846918 5.3352974 9.5312424 9.8227217 10.0179289 11.6289673 9.5278455 11.1361973 12.2410476 12.2803376 14.4223487 6.9878040 10.1655668 11.8101922 10.6456752 3.5647806 1.7992531 8.8216123 10.4198310 NA 10.1941359 8.0261383 4.7252449 3.2846770 9.9119447 11.8978031 10.2717323 11.5408801 12.7511121 7.9811420 10.6609519 10.6625017 11.1616268 11.2635861 4.7992428 11.5882891 12.6958040 -1.5228408 10.3781833 10.0744379 3.0628816 4.2052361 11.6149481 10.6940624 10.4326031 10.4542385 2.1777584 5.3102056 11.8075331 11.6939108 9.7264299 9.6928495 -0.00138580 -0.00346270 0.01307400 -0.00904340 -0.00678130 -0.00620730 -0.00572290 -0.00572290 2.31150000 2.31150000 3.11840000 0.01140000 0.00958830 0.00013863 0.00013863 0.00013863 0.00388540 -0.00242460 -0.00733390 0.01126100 0.02398700 0.03495900 0.03495900 0.03495900 0.04542400 0.04542400 0.04542400 0.02230400 0.02595200 -0.00138580 0.00000000 0.01307400 -0.00678130 -0.01711600 -0.00620730 -0.00620730 0.01768400 -0.00572290 0.00388540 0.01405100 0.00097064 -0.93653000 -0.00700110 -0.00700110 0.00458000 0.02904400 0.00958830 0.00958830 0.00013863 0.00013863 0.00013863 0.00013863 0.00388540 -0.00242460 -0.00242460 -0.00733390 0.01126100 0.01126100 0.01697700 -0.92786000 0.03495900 0.03495900 0.00776550 0.04542400 0.04542400 0.00842420 0.01242000 0.02925500 0.04230700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.707 0.547 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.391 2.312 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.707 0.547 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.391 2.312 0.000 0.000 0.000 0.000 8.6040209 NA 4.5647806 10.8026219 11.2743700 7.6646435 11.1435405 8.0608505 8.1707163 4.2052361 10.9293003 11.7726879 3.3842018 2.4773147 3.9035782 8.5779790 3.7992428 9.8348684 11.6064385 10.2060874 9.6422234 0.4773665 7.9530498 9.6946683 5.1211729 5.2974959 NA NA 10.6867699 5.1497431 6.7299823 8.3991574 5.5858399 11.6325205 10.2717323 2.0622944 8.8941141 NA 6.3165205 12.5521269 9.0716409 5.8867062 NA 6.2652193 7.7109359 NA 4.1777584 1.0622599 4.8867062 6.4863057 2.2846622 9.8288078 NA 7.2052371 10.6665233 9.4087927 3.0008834 9.1139411 11.8523559 7.1030255 1.6472224 2.5647684 11.6151081 -0.5226335 NA NA 3.2322002 13.976363 3.969169 8.523076 11.493777 10.025175 10.047647 13.377098 12.982384 9.233039 10.442379 12.292199 11.178406 8.821612 6.753441 3.834873 7.445983 11.236581 10.889092 12.214141 8.879263 13.075947 9.030946 4.686769 9.873921 8.782238 10.759148 5.521710 8.659711 8.205237 6.748779 1.936742 10.618146 7.451731 6.676449 8.189843 9.748780 10.417630 10.804027 9.006747 10.352682 4.092030 11.573612 10.017929 10.599821 10.120271 12.150736 9.062279 9.865334 10.404354 9.027101 5.121173 9.325900 8.039559 10.419831 4.000874 10.194136 6.359960 10.736177 9.911945 7.124955 13.637424 10.244673 10.657226 12.587229 10.148415 NA -1.522841 10.469901 9.848004 10.100283 TCGA-B6-A0RN 60 0 NA 8008 breast stage ia t1c n0 (i-) m0 female 1993 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 1 4 3 4 4 3 6 NA NA 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 3.81477e-07 31.25 12.5 6.25 25 25 10.1947869 9.4535968 11.8450677 8.5075743 8.3869256 8.6809368 10.6992512 9.7975255 9.8048404 9.4115277 11.7013906 10.1856462 0.3029916 12.9421177 3.6722330 8.8842038 7.4561326 8.1189203 9.9635933 13.2771787 NA 14.5393164 6.6428532 9.6634845 10.5783517 6.6838256 NA 9.6301741 7.9226118 1.8879541 8.1856461 7.4695848 NA 3.0399631 9.5398147 10.1092843 10.2440508 11.9052381 10.0126614 10.5857055 4.6249314 11.5219699 14.3001238 6.0866352 11.0467156 11.3432929 10.9967805 4.6953202 3.4184868 8.6736907 10.6132372 -1.2820878 11.1025547 7.1103580 4.6006860 3.4729296 10.4535967 12.1543618 10.7466374 12.1751650 12.7683145 8.7881617 11.2540450 10.8490262 11.3614460 10.6395098 4.4459584 12.6007792 12.1774723 -0.2819124 10.0662156 8.9189392 3.1137838 3.9659689 11.3191150 9.7500864 9.8753877 9.9414391 1.3029916 9.5221717 12.4859147 12.3306788 10.1210527 10.1443054 1.47230000 1.47230000 -0.00678130 -0.00678130 -0.00857660 -0.01059100 -0.01243800 -0.01243800 -0.00307960 -0.00307960 0.00055459 0.00631700 0.00631700 0.00480970 0.00480970 0.00480970 -0.00567570 -0.00567570 -0.00498440 -0.00926660 0.02006300 0.02960600 0.02960600 0.02960600 0.04160000 0.04160000 0.02820000 0.02890300 0.01754400 -0.01133500 -0.01316100 -0.00678130 -0.00857660 -0.01092200 -0.01059100 -0.01059100 -0.66726000 -0.01243800 -0.01243800 -0.00027724 0.00000000 -0.00307960 0.00339460 0.00339460 0.00339460 0.03270400 0.02034300 0.02034300 0.00480970 0.00480970 0.00480970 0.02652400 -0.00567570 -0.00567570 0.05124500 -0.00498440 -0.00344430 0.00555290 0.02006300 -0.84629000 0.02960600 0.02960600 0.01153900 0.04160000 0.03570800 0.02890300 -0.00193990 -0.81786000 -0.81786000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.839 0.027 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.455 0.000 0.000 0.000 -0.818 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.839 0.027 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.455 0.000 0.000 0.000 -0.818 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9707061 1.3029916 4.4993995 10.8620616 11.1813096 7.4775292 11.8673115 8.0959671 8.8198850 0.3029916 10.8607859 10.7243773 2.6249197 2.6249197 2.9659689 8.9420423 3.1774714 8.0057531 11.2366938 11.2384138 9.7562738 5.9372102 7.5221719 10.2233561 5.4993995 4.6006860 NA NA 10.3677460 7.1609837 6.8421617 7.6309303 6.1274311 10.5658341 11.0788878 4.2726279 8.1443054 NA 7.2218665 12.3420364 7.5697895 7.5666637 NA -0.2819124 9.0172488 1.0399806 3.8473255 0.3029916 4.1774714 4.7858539 0.3029916 10.2959415 NA 6.2494226 10.5533016 9.8646093 3.4184868 9.0115124 11.3290655 7.3364262 2.9659689 3.9659689 10.8569524 2.5253924 NA 2.3029916 2.6249197 12.5759245 4.1443075 8.1836071 12.9421177 9.8696915 10.9618097 13.2771787 12.0149569 9.2036385 10.5374215 13.7817728 10.2376769 8.6736907 10.4365735 -0.2819124 7.3798185 10.9444529 11.246006 11.820180 7.937209 14.096266 9.012661 4.499399 9.703171 6.937209 10.808881 5.225834 4.241604 11.701391 7.984827 6.525396 11.657804 8.467910 3.707635 11.991691 10.058447 10.356477 7.343750 8.582227 11.783625 4.672239 11.177024 10.244051 10.533824 9.668597 7.776032 8.558819 10.507982 10.507982 9.296413 1.525417 8.964615 7.295470 10.613237 5.287897 11.102555 7.689584 10.420646 10.453597 7.383377 14.686415 10.097419 10.756617 12.836333 10.811458 NA 2.887974 10.450208 9.942645 9.734849 TCGA-B6-A0RO 71 0 NA 4929 breast stage iiib t4 n1a m0 female 1993 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 1 2 1 1 4 2 4 2 3 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 18.5185185185185 7.40740740740741 0 48.1481481481481 25.9259259259259 9.1811175 9.4076451 10.8614638 9.1265839 8.4508257 9.4044651 10.1165140 10.8359619 9.0234045 14.9573055 11.2950501 10.9909125 6.0067266 13.2062613 2.1654296 9.4489751 3.8732423 7.9380128 10.2090889 12.9942477 6.7261391 13.2870866 5.3774743 9.0379897 10.2368860 10.6357435 0.5804350 8.4495923 11.3431753 NA 6.8169542 6.7138607 -0.7415414 2.7179560 10.1627914 10.7847877 10.2243173 9.5668720 9.9252009 10.7715203 13.3461616 10.5545889 13.5132664 6.4270044 8.8969690 10.8996816 11.1618500 3.3878174 1.7179560 8.6626100 11.0846842 NA 11.4206096 3.9309549 3.2127250 4.2585340 11.3241175 11.4708774 9.9243131 11.3083816 12.6311260 9.1188440 11.2392081 11.5621711 11.3529407 9.9437198 4.3878174 11.7454937 10.2933320 NA 9.6599460 8.1951709 4.0661495 4.1654216 10.7862544 10.0699077 9.3903900 9.8727828 2.4284640 9.4365754 11.7047117 10.4047835 9.8458417 8.3993630 0.4326000 0.3992300 0.0059700 -0.0008316 0.0550880 -0.0023553 0.2867500 -0.4418300 -0.0069195 -0.0069195 -0.0070576 0.4132900 0.4339500 -0.0079072 -0.0079072 -0.0063429 0.4334400 0.4334400 0.4198200 0.4339500 -0.0087146 -0.0059522 -0.0059522 -0.0059522 -0.4147600 -0.1208200 -0.0026322 0.4255300 0.0015656 -0.4316000 0.0000000 -0.4452300 0.0600790 0.0550880 -0.0023553 -0.0023553 -0.1840800 -0.4326800 -0.4738400 -0.0182490 -0.0033243 -0.9224900 -0.4448000 -0.4448000 -0.4483600 -0.4500700 0.4339500 0.4339500 -0.0099349 -0.0079072 -0.4559700 -0.0178030 0.4334400 0.4324300 0.4324300 0.4198200 0.4339500 0.4339500 -0.4516800 0.4621200 -0.0059522 -0.0059522 0.3921400 -0.4272400 -0.0026322 0.4349600 0.3880000 0.3421000 -0.4674900 0.434 0.434 0.000 0.000 0.433 0.433 0.420 0.434 0.000 0.437 0.437 0.000 0.000 0.392 0.392 0.000 0.000 -0.420 0.321 0.426 0.426 0.388 -0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.156 -0.432 0.000 0.000 0.000 0.000 -0.445 -0.445 0.000 0.000 0.434 0.434 0.000 0.000 0.433 0.433 0.420 0.434 0.000 0.437 0.437 0.000 0.000 0.392 0.392 0.000 0.000 -0.420 0.321 0.426 0.426 0.388 -0.467 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.156 -0.432 0.000 0.000 0.000 0.000 -0.445 -0.445 0.000 0.000 9.5046798 6.2472174 5.9023896 10.8183880 12.5049767 7.4349801 11.0886520 7.6264501 9.6173765 -1.7413002 10.5967122 11.3151318 1.8435015 2.8435015 -0.7415414 8.7097442 3.1165145 8.9753525 11.7169396 11.0775145 8.9397714 6.7138607 5.9520190 10.8693272 4.5804591 6.3459960 -1.7413002 NA 10.0452110 6.1654236 5.9023896 7.9641652 10.4262648 8.5062945 9.4927517 5.0134221 7.7683081 -0.7415414 7.2585331 12.1865887 5.5439351 6.1472762 -0.1564985 6.6679233 8.4483575 4.1411793 3.5064623 4.4873513 2.7820940 1.8435015 0.8435015 11.2983089 4.4483592 8.1365841 10.7486318 10.4406169 3.4679837 10.6223940 12.4270485 6.8434952 0.5804350 3.6847963 14.0978844 0.5804350 -0.1564985 1.0659169 2.0658825 12.435407 5.091425 8.795751 13.206261 10.147657 11.066693 12.994248 11.897308 8.920311 11.020707 13.383745 9.154865 8.662610 9.691597 1.717956 7.195171 13.818926 10.0472514 13.2616117 6.6721608 13.8959198 8.9397714 4.7342652 9.3293248 7.2528868 9.6608310 4.3878174 9.7712735 11.2950501 5.3565664 -0.1564985 10.3984040 3.1654296 8.0073463 9.1032388 8.9023893 11.4111347 9.0969491 8.3852373 12.0382524 2.7179560 9.7105838 10.2243173 10.7680606 9.3787708 10.5085353 8.7840537 10.7488825 9.7169396 9.0175890 NA 8.9183594 5.8279333 11.0846842 2.9589726 11.4206096 4.8878908 8.9005846 11.3241175 7.1892701 13.3132221 10.8766891 10.6089197 12.8688081 9.7332530 NA NA 10.7322388 10.4972363 8.2127293 TCGA-B6-A0RP 73 1 3126 NA breast NA t2 n1b m0 female 1994 NA no mixed histology (please specify) 2 white not hispanic or latino 1 1 2 1 2 2 4 1 5 4 NA NA 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.040392e-07 11.1111111111111 16.6666666666667 11.1111111111111 27.7777777777778 33.3333333333333 10.3771761 9.6093241 11.7809057 9.9257010 8.7704617 9.2189366 10.8101703 9.6683032 9.7594615 12.8839217 9.1821602 10.4954665 -0.2087277 13.2043736 3.7609022 10.1381577 7.4518647 8.4542397 9.5276766 13.5097362 -0.2087277 14.1532641 7.7723660 9.7221697 10.9235601 2.9611973 -1.7938569 11.6908834 11.1416614 2.7298790 7.5439343 6.6241652 -1.7938569 4.2286802 9.5671592 10.0200934 10.6618963 10.4297106 10.1935761 11.6854609 -0.7936068 10.6254823 14.5856228 7.5156297 9.6225819 12.1729077 11.4204795 4.2063150 0.7912723 9.2670081 11.6477002 -0.2087277 11.3721613 5.6157017 6.5813512 4.9744972 10.0843630 11.5848780 10.4315196 11.4802534 12.9568621 8.3420213 10.7790124 10.7415681 11.4409799 10.9580654 4.9205553 11.9488321 9.8980556 NA 10.3359172 9.4114945 3.4568981 5.7061575 10.9361453 9.4381333 10.2527541 10.0908643 2.9067559 9.4911362 12.8567469 13.0096865 10.0304754 9.7401285 0.9721100 1.0375000 0.3524600 0.3409900 0.0000000 -0.3628300 -0.0038779 -0.0115850 0.3775900 0.3775900 0.3502300 0.0136320 0.0136320 -0.0063668 -0.0159930 -0.0159930 -0.3524800 -0.3524800 -0.7265000 0.0118410 -0.3376800 0.0150280 0.0150280 0.0175440 0.0104240 0.0104240 0.0104240 0.0370760 -0.3424000 -0.3508800 0.0227250 0.3592000 0.0000000 0.0000000 -0.3628300 -0.3628300 -0.0038779 -0.0014630 0.0237830 0.0056839 0.0018900 0.3775900 -0.3526700 -0.3493900 -0.3493900 -0.3493900 0.0136320 0.0136320 -0.0063668 -0.0159930 -0.0159930 0.0155870 -0.3524800 -0.3533900 -0.3533900 -0.7265000 0.0118410 0.0118410 -0.3376800 -0.7173700 0.0150280 0.0150280 -0.3441200 -0.0044312 0.0104240 0.0370760 -0.3390600 -0.3262300 -0.3262300 0.000 0.000 0.000 0.000 -0.352 -0.352 -0.726 0.000 -0.338 0.746 0.029 0.000 0.000 -0.344 -0.344 0.000 0.000 0.695 1.038 0.000 0.000 -0.340 -0.326 0.000 0.000 0.359 0.359 0.000 0.000 -0.363 -0.363 0.000 0.000 0.000 0.000 0.378 0.378 -0.349 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 -0.352 -0.352 -0.726 0.000 -0.338 0.746 0.029 0.000 0.000 -0.344 -0.344 0.000 0.000 0.695 1.038 0.000 0.000 -0.340 -0.326 0.000 0.000 0.359 0.359 0.000 0.000 -0.363 -0.363 0.000 0.000 0.000 0.000 0.378 0.378 -0.349 -0.349 0.000 0.000 8.4435221 NA 5.5191959 11.0027574 11.0921992 7.7094423 11.3804577 8.4972527 8.6775505 -1.7938569 11.0455159 11.4602630 3.3355976 2.3762348 3.1605007 8.4494863 4.0391998 10.7886894 11.3712191 11.1350156 9.1259205 6.1778560 7.4035285 9.8062250 6.1605088 4.4351285 -1.7938569 NA 10.9261287 7.9291199 6.8099379 8.0088286 3.9342334 10.6701481 11.0360349 5.0642922 8.4542397 NA 8.0023520 12.2992344 8.3649217 7.6471814 -1.7938569 7.4375332 8.4974830 5.3862212 4.1132004 -1.7938569 5.4351318 6.0179753 2.3762348 9.5829803 NA 6.7259483 10.7699852 9.5544870 7.5986295 9.9303997 12.2036681 7.7628185 3.2937677 3.3762348 12.2126382 3.7298790 -1.7938569 1.3762348 -0.2087277 12.5608253 3.6981629 8.8329337 13.2043736 9.5648590 10.7136113 13.5097362 12.1480934 9.0510180 10.8438427 13.6501946 10.4166791 9.2670081 9.1266650 0.7912723 7.8663078 11.2772716 11.0822534 11.8057602 6.8645242 13.1336693 9.1561390 6.2175390 8.9435595 7.8136427 9.8774463 7.4327239 7.9188394 9.1821602 6.9444040 5.7454713 11.1401872 4.9477784 6.0373668 10.3827970 10.2598987 11.0625432 8.2602379 8.0055937 12.5269717 5.5282400 11.2824497 10.6618963 10.5419816 10.1288965 11.4327244 9.5174928 10.1771371 10.4019920 9.2252077 0.5282712 9.2034917 6.8437339 11.6477002 6.0007279 11.3721613 10.0980959 10.2485290 10.0843630 7.3661832 13.1433181 9.6986661 10.6045214 13.2753843 10.4121054 1.3762348 -0.2087277 10.1363102 10.6817923 9.6688144 TCGA-B6-A0RQ 68 1 4267 NA breast stage iib t3 n0 (i-) m0 female 1994 NA no infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 3 NA 4 3 3 3 4 3 NA NA 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 1.387189e-07 30.7692307692308 23.0769230769231 7.69230769230769 23.0769230769231 15.3846153846154 10.1979173 9.5880239 11.5277332 8.9639440 8.5492048 8.9386804 10.3731561 9.6980446 11.1883794 13.6141189 10.7175391 10.9416356 3.0632958 13.0996780 3.3084191 11.0446039 7.4883222 9.5722693 10.4820905 12.3078849 5.3745040 12.6246949 7.8102503 9.8647708 10.6888744 5.7262672 NA 7.7367733 8.3487029 1.8933622 8.4389839 8.1189852 NA 3.1663941 9.6785558 9.7811043 10.1546872 11.2124834 9.8961909 11.2443150 9.3711341 11.2930098 14.8975817 7.8483669 9.6070488 11.5373823 11.1710507 5.2626098 4.2153058 8.9486584 13.3973672 -0.6915226 11.2956773 4.6121932 6.3140385 3.3528009 10.1979173 11.9598014 10.4717486 12.8126116 12.8322203 8.0566063 11.1181815 10.9387328 11.0454494 11.4610151 4.5178678 11.2898023 11.4446035 NA 10.4399489 8.9887730 4.1415554 2.6303356 10.9251919 10.3565596 10.1377397 9.3013517 5.0226608 10.1257968 13.1778144 12.5532975 10.0295125 10.0118844 0.09603400 0.30985000 -0.00041585 -0.00269640 0.00513590 0.00194180 -0.07040200 -0.07040200 0.00194180 0.00194180 0.00194180 0.00013863 -0.00166290 0.00000000 0.00000000 0.00000000 0.00205120 0.00205120 -0.15119000 -0.09723200 -0.00263220 -0.04224500 -0.04224500 -0.04224500 -0.00614930 -0.00221680 -0.00705760 -0.00539920 0.09603400 0.09603400 -0.00277070 0.00013863 0.00513590 0.00513590 0.00194180 0.00194180 -0.07040200 -0.07040200 -0.03395000 0.00129930 0.00235810 0.00194180 0.00083195 -0.00207350 -0.00207350 -0.00207350 -0.00166290 -0.00166290 -0.00360110 0.00000000 0.00000000 0.00000000 0.00205120 -0.00221680 -0.00221680 -0.15119000 -0.09723200 -0.09723200 -0.00263220 -0.15631000 -0.04224500 -0.04224500 0.00124810 -0.00614930 -0.00705760 -0.00539920 0.00263570 -0.00761010 -0.00761010 0.000 0.000 0.000 0.000 0.000 0.000 -0.151 0.000 0.000 0.158 0.002 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.151 0.000 0.000 0.158 0.002 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1093130 3.6659612 4.7007282 11.0584922 12.0128574 7.1051018 11.1766572 9.3886580 8.5775285 2.1157657 11.5137484 10.7606469 2.9522776 2.8319786 4.9377681 8.5312083 3.3958717 9.3925574 11.5275819 10.3143887 9.3838926 2.3084191 7.3798756 10.5315100 4.8782692 6.3852291 NA NA 11.2734761 5.3084118 7.7409552 7.4273548 8.9450379 10.7605954 10.4021610 5.8553070 8.1679480 1.6303589 8.9341222 13.7363481 8.6144750 7.8102503 1.6303589 4.0897693 8.0897730 2.0088454 4.2391536 5.7678455 2.3958854 5.2976647 1.6303589 10.2985173 5.2856944 10.7001940 10.9854723 9.8480569 4.5751973 9.6342809 11.3640347 7.5348258 1.1157657 1.4783506 11.3652204 0.8933622 NA -0.1065601 3.1157657 12.4342369 3.5938199 8.5444274 13.0996780 10.2917633 10.4660761 12.3078849 12.4387426 9.2792382 10.5716826 12.8543431 11.0378217 8.9486584 8.1413035 -0.6915226 7.6942757 10.4389839 10.9617063 11.9384529 6.8591595 14.6454937 9.0045115 6.7719384 9.0658033 7.3196405 10.0558805 5.4982381 6.6121947 10.7175391 5.5752004 6.0498812 10.8253445 9.5833739 4.4901144 11.9647265 10.2523933 10.3252217 8.4143220 9.1003901 11.2885529 4.7346771 11.0608672 10.1546872 10.4527529 9.8947841 11.7646394 10.5527772 9.9848112 10.5444275 9.3370101 1.1157657 9.4366333 6.2153039 13.3973672 6.0226585 11.2956773 3.9808388 11.0930482 10.1979173 6.9949134 14.8822824 10.0979470 10.6334377 12.9369728 10.4622820 0.6303123 NA 10.2995809 9.9423167 9.7140866 TCGA-B6-A0RS 38 1 3063 NA breast stage iia t2 n0 (i-) m0 female 1988 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 4 4 NA NA 2 6 2 7 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.305814 9.235784 10.862193 8.258269 8.891017 9.239556 10.317995 9.581980 12.043140 13.176468 11.071349 10.143783 2.423901 14.144688 1.795850 10.176025 6.091315 7.960309 12.775869 12.713570 4.194410 12.220026 10.137328 9.335321 10.872675 5.649311 1.336455 10.453412 9.827279 3.795860 9.054104 6.375347 7.486175 4.621829 10.118607 10.629037 9.187396 10.440043 10.394758 10.709293 6.444952 8.409230 15.155609 5.608919 8.042060 10.394081 10.465066 3.194402 NA 9.646472 10.270487 NA 10.508230 5.064348 6.626446 6.036868 10.423227 11.623563 10.475659 11.563442 13.008632 7.923267 10.397461 9.649571 11.103371 10.274169 3.693978 12.649736 9.450170 -1.663374 10.130437 9.066048 2.340933 5.064348 10.935178 10.338539 10.036000 10.062646 3.194402 9.870731 14.785963 12.473018 9.806069 9.391710 1.0067000 0.5904500 0.3202600 0.6942800 0.5147200 -0.0172540 0.7976200 0.1428000 -0.0027707 -0.0027707 0.5463000 0.5343200 0.5360800 0.1736200 0.1481600 0.1858600 0.2229900 -0.0637030 0.5114100 0.5468300 -0.1675200 0.1640000 0.1417600 0.1620500 -0.2229300 0.1925400 0.2466900 -0.1499000 -0.5330700 -0.1934700 -0.3611300 -0.5418900 -0.5667200 -1.2929000 -0.5717000 -0.5641600 0.7976200 -0.0138150 -0.4374600 -0.1898600 -0.5869600 -0.7345900 1.4006000 0.7753600 -0.6437700 0.5554900 -0.1526700 0.4987400 -0.3490500 0.1481600 -0.4970500 0.4071100 0.0917350 -0.0546900 -0.0396650 0.1483100 0.1851000 0.2111500 -0.5196900 -0.5540700 -0.5557700 0.1417600 -0.6118100 -0.2229300 0.8886600 -0.2597400 -0.1926200 0.2196000 -0.5364200 -0.153 -0.153 0.174 0.174 0.000 0.000 0.148 0.185 -0.224 0.210 0.210 -0.540 -0.398 -0.553 -0.553 -0.001 0.193 -0.192 0.549 -0.260 -0.150 -0.159 0.196 0.000 0.000 0.159 0.159 -0.535 0.000 -0.564 -0.564 0.000 0.000 -0.026 -0.026 -0.280 -0.137 0.775 0.606 0.000 0.000 -0.153 -0.153 0.174 0.174 0.000 0.000 0.148 0.185 -0.224 0.210 0.210 -0.540 -0.398 -0.553 -0.553 -0.001 0.193 -0.192 0.549 -0.260 -0.150 -0.159 0.196 0.000 0.000 0.159 0.159 -0.535 0.000 -0.564 -0.564 0.000 0.000 -0.026 -0.026 -0.280 -0.137 0.775 0.606 0.000 0.000 8.2037062 NA 6.2789419 10.6261584 12.1978054 6.2865467 11.5595244 8.1476420 9.1328161 1.1437852 12.9791563 11.6625285 2.5843613 1.6583715 3.9511401 8.0159079 3.9511401 10.7655729 11.5902751 11.1259613 9.5622377 2.7958500 7.7458188 9.7871234 7.2552911 5.8442224 1.7958500 NA 10.5206832 2.9213982 6.0643483 8.8629268 8.5640435 9.9166202 10.6073069 3.4657133 9.9043837 4.5262504 7.4449519 13.3879765 7.5938154 8.2357845 -0.6636023 0.6583715 8.4449519 NA 2.4239008 NA 5.9874800 2.7958500 1.6583715 11.2442572 NA 8.1128607 10.6376380 10.5157148 10.1621815 10.0132663 12.9153900 9.0711373 5.5163367 4.0913190 10.4377468 1.9213982 -0.6636023 0.3363977 3.8282761 13.799576 7.074520 9.332901 14.144688 10.375689 11.454233 12.713570 7.989272 9.348151 10.568249 13.810007 12.124840 9.646472 9.259012 3.091311 7.637924 11.062007 11.7628235 11.7136382 6.1177865 13.4695281 9.4092301 6.6264464 9.6424893 7.8619485 10.6288212 6.7458182 4.6032168 11.0713489 7.7605942 NA 10.5370198 6.0017640 7.4959206 9.4695698 10.8687836 10.9129120 6.3476550 8.6549704 8.0053124 6.4025175 11.2890998 9.1873959 9.9548131 10.4495187 7.7092927 10.1012992 10.8392595 10.9460681 8.7553343 3.7626890 9.1232120 8.2774901 10.2704870 7.0846203 10.5082300 5.9946386 11.2922918 10.4232274 7.0407807 14.3477423 10.1169674 11.1304373 12.7161445 10.8157027 0.9213602 NA 9.9662397 10.4347887 9.9138565 TCGA-B6-A0RT 39 0 NA 2721 breast stage iiia t3 n1 m0 female 1996 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 2 3 3 3 4 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 3.467973e-08 9.09090909090909 36.3636363636364 9.09090909090909 27.2727272727273 18.1818181818182 10.71603532 9.39451629 11.96211037 9.45523515 8.61817367 9.71957569 10.23164433 10.61992347 10.95103222 12.63420660 10.98605135 10.75875113 2.59464409 11.62414335 3.04715446 10.36421500 5.86241172 9.21089680 8.74010117 5.59463812 -0.06839258 10.82472180 7.72608870 9.48089943 10.76377199 5.42352775 -0.06839258 11.34441054 10.84730357 3.47599277 10.11861267 7.62748136 0.66866378 6.17325938 10.32970419 10.31969041 9.35583933 10.80895726 9.97788765 11.62950949 3.39110780 8.34811864 14.73504752 9.10323351 9.37875631 11.12663511 10.11323961 4.72174996 NA 9.50532032 11.12807032 -0.06839258 10.85227411 6.40199389 9.25134535 5.97606801 9.74117336 12.22753770 10.26706346 11.08353531 12.84549752 6.37461699 10.83052638 10.64477607 11.30996797 11.35040420 5.17960261 12.03703605 9.23393119 0.34675837 10.40841934 9.85599079 4.15483431 7.50152911 11.67594636 10.35688900 11.43731930 10.33823252 3.55615961 7.72392096 12.79579478 12.39025063 9.71957569 9.77559415 0.4819900 0.2639900 -0.0111980 -0.0111980 -0.0472600 -0.0136770 0.0265140 0.0265140 0.0759910 0.0759910 0.3738000 0.1584600 0.0037465 -0.0102320 -0.0102320 -0.0102320 -0.0182160 -0.0785440 -0.0483420 0.0223040 -0.0490190 -0.0948600 -0.0019399 -0.0019399 0.0122370 0.0572260 0.0784620 0.0018030 0.0933920 0.0216410 0.0000000 -0.0111980 -0.0357210 -0.0472600 -0.0136770 -0.0136770 0.0265140 0.0265140 0.0265140 0.0594690 0.0594690 0.0167950 0.0387710 0.0387710 0.0387710 0.0387710 0.0037465 -0.1003000 -0.0102320 -0.0102320 -0.0102320 -0.0102320 -0.0511360 -0.0785440 -0.0922130 -0.0483420 0.0223040 0.0223040 -0.0828010 -0.0475310 -0.1048200 -0.0019399 0.1340600 0.0122370 0.0969610 0.0018030 0.0213230 -0.0253460 -0.0253460 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.5015291 5.4656513 4.5166330 10.2569785 11.4800134 7.9937191 11.1429531 10.4060213 9.1021075 2.6686411 12.0486668 11.4859806 3.1015997 NA 3.5946441 9.4053789 3.9013014 11.9933818 11.4637043 11.0759065 9.0410685 2.5946441 9.6915614 10.4575201 10.0797260 5.5946381 -0.6533551 -1.6533551 10.8552482 5.2293534 7.3746170 9.1827611 6.5610297 10.7318693 11.0549324 5.6134963 10.0982547 0.9316831 7.9887625 12.0712245 9.3417712 6.6954385 -0.6533551 7.2685514 7.8122768 1.8061591 3.8061384 -1.6533551 10.1704759 5.3319846 7.3182545 11.0060377 1.6686184 9.8390646 11.0371452 9.6430533 8.1132395 11.4260287 14.1346897 9.7102980 8.1165483 6.7896536 10.4571939 NA -1.6533551 0.6686638 6.1280706 10.1830964 8.6413314 8.6111532 11.6241434 10.7891358 11.0497491 5.5946381 10.5094167 9.0923851 10.9231949 13.9517560 11.9035759 9.5053203 7.3382327 0.9316831 8.1065991 11.5287946 10.622544 11.988198 3.668641 13.888591 9.090703 10.186308 8.580330 7.385629 9.976254 10.345301 8.504057 10.986051 10.805886 3.434174 11.439633 7.840566 9.068220 11.617298 12.112515 10.753713 8.296537 8.378757 10.004476 10.433510 11.359426 9.355839 10.913954 10.192593 10.859698 11.302179 10.828006 10.426529 8.907999 NA 10.263766 8.405555 11.128070 10.178809 10.852274 5.641332 10.953116 9.741173 8.488971 13.834205 10.209348 10.661860 12.432266 11.169879 9.078030 4.019133 10.393494 10.185521 9.277448 TCGA-B6-A0RU 40 0 NA 8605 breast stage ia t1c n0 (i-) m0 female 1990 NA yes other, specify 0 white not hispanic or latino 2 3 4 4 1 1 5 5 4 7 NA NA 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 8.323135e-07 2.774378e-07 18.1818181818182 18.1818181818182 0 27.2727272727273 36.3636363636364 9.769030 10.025301 11.177820 9.393156 8.184654 8.788262 9.652378 10.504469 11.012968 13.296489 10.429986 10.986973 1.505180 11.755620 3.205611 11.077400 5.634457 8.920915 11.348113 8.469514 NA 10.227127 7.462276 9.279137 10.507989 6.412063 4.149032 10.654603 11.814934 2.827108 7.226272 8.358483 1.090108 4.527540 9.626059 9.603864 9.236493 10.034116 9.396198 11.017420 7.093889 8.086374 15.081953 7.631723 9.896417 10.824281 10.772838 6.654921 1.827087 9.115276 12.659754 NA 10.178924 5.412063 5.399991 3.862729 9.300402 12.347229 10.189045 11.286123 12.656983 6.424037 10.614678 10.722413 10.956385 10.950447 4.845023 12.606575 10.582323 -1.494922 10.165169 9.859974 5.610558 3.714630 9.362377 10.319756 9.732188 10.382074 5.028737 9.082602 12.893662 12.321057 10.754287 9.916685 0.154230 0.818780 0.155570 0.155570 -0.362270 -0.322660 0.136980 -0.350790 -0.393220 0.231590 1.645400 -0.261710 -0.373230 0.055903 -0.394230 -0.394230 -0.356320 -0.342770 0.228500 0.177350 -0.281710 -0.341280 -0.341280 -0.341280 0.114000 0.114000 0.549780 0.172070 -0.425520 0.154230 -0.319750 0.155570 -0.362270 0.146630 -0.322660 -0.238420 0.136980 -0.350790 -0.333440 0.061039 0.000000 -0.393220 0.144380 0.144380 -0.412040 -0.025732 -0.725200 -0.367400 -0.400780 -0.394230 -0.298800 -0.190770 -0.356320 -0.354760 -0.422680 -0.360710 0.177350 0.177350 -0.281710 0.015408 -0.341280 -0.341280 0.605880 -0.406420 0.114000 0.125900 0.202240 0.288770 0.263680 -0.367 -0.367 -0.394 -0.394 -0.356 -0.356 -0.361 0.177 -0.282 0.000 0.000 -0.341 -0.341 0.137 0.000 0.114 0.114 0.154 0.154 0.126 0.126 0.202 0.289 0.109 -0.210 0.156 0.156 -0.362 -0.362 -0.238 -0.238 0.137 -0.196 0.000 0.000 -0.129 0.264 0.105 0.105 -0.362 0.000 -0.367 -0.367 -0.394 -0.394 -0.356 -0.356 -0.361 0.177 -0.282 0.000 0.000 -0.341 -0.341 0.137 0.000 0.114 0.114 0.154 0.154 0.126 0.126 0.202 0.289 0.109 -0.210 0.156 0.156 -0.362 -0.362 -0.238 -0.238 0.137 -0.196 0.000 0.000 -0.129 0.264 0.105 0.105 -0.362 0.000 8.24664038 NA 6.50517321 10.32814262 11.28325068 6.13256245 10.45609389 10.08339529 7.93619034 2.82710766 11.52771475 11.41925962 6.09762976 2.09014207 3.09014207 9.54066006 3.26005577 8.84835910 11.28817172 10.56890568 9.49669542 0.09017595 8.11804196 9.94084374 5.82710258 6.39391724 NA 2.59263643 11.34555810 4.86272413 7.09763081 8.10322590 8.05013815 9.51105762 10.43258115 3.86272909 10.42998600 -1.49492209 8.59528583 13.82882647 6.38781572 10.33370671 NA 4.67509892 7.90177801 5.83609076 4.45937260 -0.49492209 4.17759893 2.76670116 8.16159851 11.42850103 6.26672471 9.99351586 10.92170722 9.79807029 6.82258613 9.12539332 11.78289680 8.94915320 1.50517957 2.96460194 10.56553168 2.89749215 9.87531594 -0.49492209 8.16695139 10.792886 8.539973 7.579315 11.755620 10.243680 11.880213 8.469514 10.409055 8.863286 10.616841 12.551786 11.752063 9.115276 9.031673 1.827087 7.831603 10.633490 11.2239204 12.3550673 4.4359086 14.9212616 9.0248097 8.2583903 8.9324864 8.8725884 10.2251270 4.7719595 6.7097442 10.4299860 10.4414434 5.5819899 10.5779761 8.7447720 9.3834084 14.5771595 10.2483249 10.4154415 9.0843574 8.9345802 10.0159377 6.0597619 8.9856003 9.2364926 10.6127176 9.8605246 10.8902270 11.8526565 11.4214262 10.9930136 9.1749444 5.2865337 9.2342843 7.3405605 12.6597543 4.9481149 10.1789242 8.5522975 10.4403938 9.3004015 7.9418851 14.7383063 10.0114811 10.6744722 12.2196337 10.2708740 0.5051796 NA 10.9314383 10.2646456 9.5672197 TCGA-B6-A0RV 42 0 NA 5156 breast stage iiia t3 n2 m0 female 1996 NA yes mixed histology (please specify) 5 white not hispanic or latino 2 2 3 5 4 3 3 3 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 4.855162e-07 14.2857142857143 76.1904761904762 0 4.76190476190476 4.76190476190476 10.3420568 9.6047923 11.7019352 9.2661442 7.7258332 9.0830503 10.3425049 9.4865107 9.2557139 10.5776420 11.4250044 10.3861928 0.2746493 12.2355896 3.6896570 10.0792912 6.4775624 8.3062089 9.4962095 13.2947342 3.5965536 13.5403351 5.8595845 9.1198093 11.2440089 5.7876910 0.2746493 9.2384819 9.8020993 2.6896570 8.6467621 7.4478833 NA 4.3335168 9.4627992 9.8092495 9.3638522 12.3222007 9.8570781 11.3312601 12.1712071 12.0115880 14.1916836 8.0190302 10.3687000 10.9707205 10.5324031 4.5723016 3.9375892 8.9399582 11.2967590 NA 11.1274120 6.0559830 5.4445478 4.6203987 10.6181783 12.0111653 10.0053756 12.3302438 12.7892542 7.4175800 11.0115880 10.6446777 11.4734766 11.1051376 4.7557475 12.4623868 11.7792759 NA 10.0974587 9.4124674 3.0826685 5.1974526 10.7893365 10.3656169 9.5522973 10.2651992 3.2132228 10.6006773 12.7297783 11.7237710 9.9476369 9.2988386 0.0185230 0.0185230 -0.0020784 -0.0138150 -0.0227440 0.0068443 0.0112080 -0.0173540 3.1455000 0.5065400 0.4885400 0.0048579 0.0135270 0.0080414 0.5322200 0.0190830 -0.4734200 0.0000000 -0.0036011 0.0068044 0.0302230 -0.3964200 -0.4421000 2.6975000 0.0442900 0.0442900 0.0455660 0.0331270 0.0620800 0.0185230 0.0432990 -0.0020784 -0.0227440 -0.0227440 -0.0231150 -0.0150540 0.0221640 -0.0139200 -0.0173540 0.5884700 0.4428200 -0.5052500 0.0000000 0.0000000 0.0000000 0.0260920 0.0135270 0.0135270 0.0080414 0.0151680 -0.4874300 -0.4874300 -0.4734200 -0.0062286 -0.4675900 -0.0140900 0.0068044 0.0068044 0.0114760 -0.5270600 -0.4565100 -0.4421000 0.0102850 0.0442900 -0.3923000 0.0467000 0.0058309 0.0593400 0.0692390 0.000 0.000 0.000 0.000 -0.467 0.000 0.000 0.000 0.000 0.000 -0.522 -0.457 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.443 0.443 3.152 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.467 0.000 0.000 0.000 0.000 0.000 -0.522 -0.457 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.443 0.443 3.152 3.657 0.000 0.000 0.000 0.000 8.4277520 NA 4.5965476 10.6521944 11.5008339 7.0840366 10.7313190 8.8673659 8.2681836 1.6896570 11.3989591 10.9010585 2.9375892 2.0116030 3.7340592 8.1531842 3.2132228 10.4107590 11.5245259 10.4897508 9.1148758 5.2288187 8.0205766 8.7395086 7.9727484 4.6203987 NA NA 10.8773213 8.8770120 7.0862647 8.7449425 7.9256743 10.3400340 9.8507918 4.0472155 8.9387733 0.2746493 8.3262843 13.1988782 7.4412038 7.6174381 NA 7.0205766 7.9256743 -0.3102536 4.1490886 -1.3104325 6.3262839 3.9126978 4.2132228 10.2461659 1.8595721 9.4636233 10.6857802 9.8221596 5.4445478 9.7764595 12.7913073 8.4412038 3.0819702 4.2442477 13.7111171 -1.3104325 NA NA 2.4970247 13.694946 5.734054 8.224935 12.235590 10.064156 9.858959 13.294734 12.624549 9.135709 10.124809 12.581823 10.521363 8.939958 8.219091 0.689657 8.907617 11.221285 10.721361 12.446842 6.296990 13.919751 9.120112 6.798184 8.462799 7.678344 10.776108 7.073364 8.329905 11.425004 6.431126 3.497012 10.737125 8.167418 7.200424 11.638392 10.148066 10.741209 7.528864 9.104345 11.577452 6.869569 10.237436 9.363852 10.492984 9.790979 10.981118 9.610013 10.977372 10.438691 8.879484 NA 9.007638 7.457845 11.296759 6.829212 11.127412 6.808601 10.503441 10.618178 7.285850 14.388066 10.314455 10.026724 12.143959 11.161843 5.666941 NA 10.341160 10.166406 9.401327 TCGA-B6-A0WS 58 1 2965 NA breast stage x t1c nx mx female 1996 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino 1 2 3 NA NA NA 4 4 5 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 3.121176e-07 25 20 5 15 35 11.74483270 9.97416202 11.58734680 9.68694675 8.55650146 8.81427547 10.57476371 9.69531704 9.99900724 13.77126693 11.07382873 10.38526309 1.45454442 12.17412852 2.77646198 9.86709569 5.62445187 8.25865695 11.27669823 12.29402485 1.45454442 13.97995484 6.00141945 9.29244542 10.50369368 7.03572617 -0.54540294 9.54725644 9.38156285 1.62442848 9.73819294 8.14626929 NA 4.72131250 9.95387341 10.99295724 9.23013599 10.22312373 10.03006497 11.44090119 1.45454442 11.66016632 14.93147762 7.64610360 10.45979942 11.17177377 11.20460464 3.88079326 0.03941918 9.55781366 11.28127290 -0.54540294 10.96355851 5.34934404 6.78991570 5.12695221 9.71544538 11.40890389 10.39005919 12.35133120 12.87842955 7.08388243 11.63163385 11.32393841 11.22560253 10.99392700 4.26188430 11.87330080 11.50079717 0.45449178 10.59439683 9.33257659 2.45633306 5.71191334 10.65327772 9.79437574 10.27590124 10.60617662 2.15497199 7.12341065 12.26389198 11.77701731 9.56500913 9.22105465 0.00805670 0.00083195 -0.51455000 0.47632000 -0.00239970 0.00229620 -0.04759400 -0.10900000 1.39120000 3.65690000 0.48544000 0.00083195 0.00305220 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 -0.51290000 -0.46440000 0.00263570 0.43513000 0.00083195 0.00083195 -0.00207840 -0.00207840 -0.00207840 -0.00180140 -0.00055444 0.00805670 -0.00401620 -0.51455000 -0.00744160 0.02076300 0.00499690 0.00499690 -0.03912200 -0.10900000 -0.11206000 0.00958830 0.00000000 -0.52102000 0.00388540 0.00388540 0.00117470 0.00117470 0.00374650 0.00374650 0.00000000 0.00000000 -0.51239000 -0.51692000 0.00000000 -0.00235530 -0.00235530 -0.47997000 -0.46440000 -0.46440000 0.00263570 -0.41003000 -0.51197000 0.00083195 0.61879000 -0.00207840 -0.00207840 -0.00180140 0.00444110 0.00110930 0.00110930 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.464 0.000 0.390 -0.410 -0.512 0.000 0.547 0.547 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.521 -0.036 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.464 0.000 0.390 -0.410 -0.512 0.000 0.547 0.547 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.521 -0.036 0.000 0.000 0.000 0.000 8.50301275 0.45449178 5.00911423 10.37115174 11.41126496 7.57970664 10.54165712 9.19946893 8.88699452 1.62442848 12.82575793 11.11715859 6.79437557 0.03941918 3.49891461 8.04698264 3.73992369 10.88628454 11.66656613 10.27550252 9.10916177 3.81207716 7.43180596 10.22848912 8.25865695 5.65419778 -1.54540294 -1.54540294 10.81783923 4.45452468 6.81646915 7.96232055 5.14102808 10.29752813 9.99319981 3.97808578 8.59918387 -1.54540294 8.02627832 12.35322163 7.49344479 7.24568865 -1.54540294 7.43466575 8.22270991 NA 4.12694808 -1.54540294 7.26509741 5.55434634 4.68334275 10.13488537 -1.54540294 9.42103117 10.39226740 9.78039344 5.45452468 10.11897312 13.39245127 8.98785547 3.66398213 5.23588403 14.22769076 1.03948937 1.26189182 4.06923815 1.62442848 14.057254 6.141026 8.802147 12.174129 9.690540 10.254212 12.294025 12.120750 9.108266 11.041366 12.755307 10.734136 9.557814 8.282662 3.312505 7.309394 11.806431 11.201880 11.365543 7.306275 13.341936 9.271509 7.774198 8.832821 9.299232 10.202815 7.591517 9.492759 11.073829 6.420311 3.498915 10.804913 8.144524 7.681300 10.652050 10.462254 10.491386 7.928232 8.727156 12.579939 8.012946 11.869223 9.230136 10.302366 9.882362 11.330083 9.934811 10.783762 10.625390 8.884978 4.583808 9.080855 7.570870 11.281273 7.960337 10.963559 7.352371 10.943315 9.715445 7.080234 13.238752 10.225603 9.776454 13.779023 10.605225 5.541989 1.776441 10.559452 10.114522 9.744545 TCGA-B6-A0WT 61 0 NA 5739 breast stage iib t2 n1 m0 female 1995 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 1 3 1 NA NA 1 1 3 4 NA NA 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.733986e-07 29.4117647058824 17.6470588235294 0 5.88235294117647 47.0588235294118 10.6547985 10.4862632 12.1849709 10.3067740 7.8987985 9.1211905 10.5486531 9.9322212 9.5011877 14.3082333 10.5800365 10.9742773 -0.6861737 12.5219176 4.3138336 9.1780219 5.8987985 8.6153317 8.0720586 13.0527724 3.4837642 13.3905678 5.2680338 9.3208630 11.0653797 7.7895689 1.8987888 10.6586864 9.5899601 3.4837642 8.2534150 8.1211905 NA 4.7732685 10.2071372 10.5617632 11.2781765 11.8034328 10.4943665 11.8612122 13.2274731 11.4272523 14.8668349 9.6893638 10.5847150 12.0584593 11.2654847 5.7732685 5.2207246 9.1033694 11.6867007 NA 11.0724753 7.0951955 5.8836917 4.4431159 10.9067598 12.1575605 10.0795361 12.2224159 13.2167760 7.6221748 11.2460504 10.9707789 11.7048107 11.2282208 5.8684250 11.9760590 12.5498499 -0.6861737 10.1316188 9.1872798 2.9012048 4.5232859 10.8171645 10.1941845 10.2694856 10.0142754 3.0142839 9.9202409 12.9673526 10.5729904 10.5771048 9.6867008 0.61970000 0.61970000 -0.00871460 -0.00871460 0.00083195 0.60828000 0.63280000 0.00332990 3.65690000 1.58510000 0.00638710 -0.67564000 -0.00733390 3.65690000 -0.01326400 -0.01326400 0.00180300 0.00180300 0.08710000 -0.00110870 0.58955000 -0.01780300 -0.01780300 -0.01780300 -0.04251700 -0.04251700 -0.05711600 -0.01574100 -0.00401620 -0.00401620 0.00124810 -0.00871460 0.00083195 0.00083195 0.00569190 0.00569190 0.63280000 0.00332990 -0.66883000 0.00000000 0.00000000 -0.66989000 -0.00691950 -0.00691950 -0.00691950 -0.00691950 -0.65594000 -0.00719580 -0.00713050 -0.01326400 -0.65640000 -0.01312700 0.00180300 0.00180300 0.00180300 -0.00110870 -0.00110870 -0.00110870 -0.01064600 -0.15554000 -0.01780300 -0.01780300 -0.00526100 -0.04251700 -0.04251700 -0.67756000 -0.01257600 -0.02767100 -0.02767100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.557 0.557 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.557 0.557 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 0.000 0.000 0.000 0.000 0.000 7.9612940 NA 5.1964772 9.6141882 10.8056887 6.2609177 10.7814412 8.5494670 8.3222644 NA 11.3028753 10.9358417 5.6713868 2.4837513 3.6357660 8.9880279 3.7732685 10.6130437 11.2723884 10.8422898 9.3445028 3.2207324 7.5992382 9.3893149 6.4737074 3.5617660 2.3138263 NA 10.4340736 7.7650467 6.2911154 7.9933160 4.3582275 10.1020809 10.8086913 3.2207324 8.5110525 NA 7.6447525 12.4324524 8.3445028 6.9933155 NA NA 8.4327766 3.8373983 2.1211812 1.8987888 3.8987985 5.7765436 2.4837513 10.0828469 0.3138263 7.4275777 11.2184703 9.8665048 3.3138408 8.9985842 12.5124342 6.8529951 3.3138408 2.7732579 11.4737070 4.5992404 -0.6861737 2.8987888 2.3138263 13.5397284 5.7567805 9.0653798 12.5219176 10.8168613 10.8171645 13.0527724 13.2172468 9.4236664 11.2515773 13.0949904 8.9915553 9.1033694 10.2018179 -0.6861737 7.7650467 11.7117776 11.5107451 12.0129743 7.6581315 13.8233620 9.1918866 5.2680338 8.9211661 9.5036602 10.5759482 5.4635832 9.0451546 10.5800365 6.8295350 3.1211978 11.2427241 6.1082505 8.2837977 12.3058889 9.9174620 11.0306551 7.4887616 7.8295356 13.0696621 7.3025201 12.1791417 11.2781765 10.0712257 9.4508267 10.2326989 9.8432663 10.7763379 10.6991588 9.1980061 0.8987888 8.9328634 7.0417566 11.6867007 7.0485457 11.0724753 9.1718165 10.2825025 10.9067598 8.0796357 13.1992337 9.9836066 9.6402652 13.1304194 10.8534792 NA 1.8987888 10.9377171 10.7179128 9.9612941 TCGA-B6-A0WV 67 1 2417 NA breast stage iib t2 n1b m0 female 1995 NA no infiltrating ductal carcinoma 4 white not hispanic or latino 1 1 1 1 NA NA 1 1 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.733986e-07 10 20 0 30 40 10.2355093 10.6831477 11.6784034 9.9722596 9.0678705 9.8905193 10.2077905 10.2981878 9.0410173 14.5331443 11.3272723 11.0010441 2.0174231 11.8852106 2.3069330 8.2821201 6.2904355 8.5479317 9.7339508 12.9327985 1.1694120 14.1845912 4.0174142 8.9376045 11.4562089 7.2181796 -0.1524841 9.0678705 10.8959790 2.3069330 6.9135812 7.4804873 14.1439064 0.4324250 10.2398095 11.4128322 9.5322406 11.2616488 9.6628754 11.7000215 0.4324250 11.6123636 14.8328003 8.1851584 9.5617376 11.2642896 11.0969018 3.8918858 4.4622029 9.1294221 11.2132677 0.4324250 11.4798057 6.3313075 2.3069330 3.6023737 10.2028432 11.9937425 10.1901223 11.4985437 12.7927530 7.8781595 10.8983610 10.5016806 11.2891394 10.8322665 5.7178573 11.9746803 10.5969425 NA 10.4881889 9.1951133 2.0190258 3.3069184 10.7011915 9.9664331 10.7354742 10.0447087 0.4324250 8.9000601 12.7711909 9.9832013 10.7400349 8.3513178 0.1776900 0.1776900 0.1001600 0.1001600 -0.1032900 0.3977800 -0.4602500 -0.4602500 0.7058800 0.0485460 0.0693820 -0.0721620 0.1783000 0.2945300 1.6907000 -0.5494500 0.2881800 0.2881800 0.4592200 0.5266000 -0.5419800 0.6446900 -0.5663400 0.7139200 -0.0078863 -0.0078863 0.0108420 1.0306000 -0.3499600 -0.3182100 0.0000000 0.1001600 -0.1032900 -0.1032900 -0.5435100 0.4228400 -0.4602500 -0.4602500 -0.4752200 0.1852500 0.2373600 -0.5943900 -0.5432000 -0.5215400 -0.0223320 -0.0223320 0.1783000 0.1783000 0.2804200 0.1119800 -0.5531700 -0.5531700 0.2881800 0.2881800 0.2881800 -0.4949600 0.4601300 -0.5498500 -0.5343900 -0.0008316 -0.5698200 0.1867700 -0.2088300 -0.0078863 -0.0078863 1.0570000 -0.1186100 0.1348000 0.1348000 0.000 0.178 -0.261 -0.535 0.288 0.288 -0.495 0.460 -0.542 0.000 0.000 -0.579 0.100 -0.209 -0.209 0.000 0.000 -0.141 0.178 1.057 1.057 0.000 0.135 0.000 0.000 0.100 0.100 -0.103 -0.103 0.398 0.398 -0.460 -0.460 0.239 0.239 0.000 0.000 -1.293 -1.293 -0.127 0.000 0.000 0.178 -0.261 -0.535 0.288 0.288 -0.495 0.460 -0.542 0.000 0.000 -0.579 0.100 -0.209 -0.209 0.000 0.000 -0.141 0.178 1.057 1.057 0.000 0.135 0.000 0.000 0.100 0.100 -0.103 -0.103 0.398 0.398 -0.460 -0.460 0.239 0.239 0.000 0.000 -1.293 -1.293 -0.127 0.000 7.7987770 -1.1526444 3.6548479 9.8760888 11.8881243 6.8589992 10.5448940 7.3140376 8.5651684 -1.1526444 10.2257869 11.7480910 3.3710570 4.3710570 2.4324517 8.1212874 3.0174231 9.9991429 11.4665657 10.5199174 8.8319105 0.4324250 8.0763106 9.9095382 3.0954181 4.0174142 2.1694120 NA 10.4603606 5.6156752 6.6548465 7.8333341 6.4548224 10.2741866 10.1212877 -0.1524841 8.5513957 -0.1524841 8.2590031 12.7139983 8.0496161 5.7663540 NA 7.5269718 8.6851199 -0.1524841 NA NA 1.4324784 4.5830135 -1.1526444 10.8864111 2.0174231 7.1694200 9.6007089 10.0660553 2.6548479 9.1716727 12.4835502 5.8587196 2.8474959 3.3069184 10.7335697 1.6548479 NA 0.4324250 2.5479433 13.925172 6.886411 8.737756 11.885211 9.422086 10.765610 12.932799 12.361220 8.302819 11.109881 12.413308 9.951436 9.129422 8.458517 -1.152644 7.784130 11.841669 10.851010 11.633149 8.409735 13.273100 8.946840 4.205041 8.638655 9.802415 10.286190 3.017423 8.662875 11.327272 4.017414 2.934950 10.239809 4.017414 8.675597 9.955363 9.876089 10.027401 10.731983 8.785601 11.178689 2.547943 11.969786 9.532241 10.949468 9.930971 11.278467 8.694549 10.735855 10.740794 9.196220 1.654848 8.592965 6.628459 11.213268 1.432478 11.479806 5.114280 10.193452 10.202843 7.196220 13.151843 10.074506 9.471374 12.689842 10.289399 NA NA 10.575412 9.834045 9.478669 TCGA-B6-A0WW 58 1 558 NA breast stage x t2 n1b mx female 1997 NA yes infiltrating ductal carcinoma 5 black or african american not hispanic or latino 1 1 1 2 NA NA 1 2 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 3.121176e-07 27.2727272727273 27.2727272727273 9.09090909090909 18.1818181818182 18.1818181818182 9.1976256 10.3218769 11.5670394 9.0904957 8.6913998 9.5089105 9.2483479 9.0446919 9.0934981 13.8989236 11.5153618 10.4993207 NA 13.1672222 3.6430365 8.8489409 5.7835169 8.3758978 8.9731388 13.3836608 3.1835977 13.3836608 6.1261201 9.9444165 11.8944115 6.6014573 NA 7.5972332 10.7718513 1.7685866 8.3560324 6.5586442 NA 3.2710670 9.9575684 10.2011095 10.6218771 10.7115707 9.9216974 11.0719678 NA 11.0769066 14.0322769 7.5541184 10.1948323 11.8502729 11.2341340 2.1836135 6.8202300 9.0949971 11.0133278 0.1835818 10.8161460 5.5759234 3.9909639 3.4315294 9.5389562 11.5493807 10.7825880 11.2644226 12.5915367 9.1024684 10.5716224 10.0470170 11.4142260 10.3327171 4.8560296 11.7593807 11.6281024 0.1835818 10.2670844 8.6223971 2.6430481 2.8840508 10.6789605 9.7012744 9.6337854 10.9583921 3.6430365 7.7872313 12.2966961 10.2590843 9.7140114 9.3205961 1.1292000 1.1571000 -0.6423600 0.0123760 -0.0073339 0.0384890 -0.0210980 -0.0210980 2.7535000 2.1016000 1.7581000 0.0315770 0.0435820 -0.6314000 3.6569000 -0.6344300 0.0125160 0.0125160 -0.6407600 0.2807400 -0.6279200 0.0764220 0.0567760 0.0567760 0.0182430 0.0182430 0.0182430 0.0873900 -0.6241100 -0.6241100 0.0498240 -0.6423600 0.0762790 -0.0073339 0.0115390 0.0115390 -0.0210980 -0.0210980 0.0013172 -0.0135820 0.0018030 -0.6268400 3.6569000 -0.6482900 0.0457490 0.0700990 0.0435820 0.0435820 -0.6314000 0.0386300 -0.6344300 -0.6344300 0.0125160 -0.0484970 0.0810330 -0.6547500 -0.3634000 -0.3526700 0.0300290 -0.5999300 0.0764220 0.0567760 -0.6367800 0.0182430 0.0182430 0.0726190 -0.1787900 -0.0865180 -0.5677300 0.000 0.000 -0.634 -0.634 0.000 0.000 -0.655 -0.363 0.000 0.000 -0.600 0.000 0.000 -0.619 -0.619 0.000 0.000 -0.624 0.505 0.000 0.000 -0.122 -0.568 0.000 0.000 -0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.627 1.758 -0.639 -0.639 0.000 0.000 0.000 0.000 -0.634 -0.634 0.000 0.000 -0.655 -0.363 0.000 0.000 -0.600 0.000 0.000 -0.619 -0.619 0.000 0.000 -0.624 0.505 0.000 0.000 -0.122 -0.568 0.000 0.000 -0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.627 1.758 -0.639 -0.639 0.000 0.000 8.9418282 -0.8162912 6.3025457 9.6643954 11.1020957 6.1948317 11.1832528 8.5005882 9.3529915 NA 11.4690073 11.9146886 0.1835818 5.6593395 0.7685866 8.1551486 3.0904978 11.1002310 11.6918951 11.5315033 8.6491714 -0.8162912 6.9845050 10.0361346 5.0662485 4.7983150 1.7685866 NA 10.0508838 5.3930592 5.8560296 7.6265486 5.7071658 9.6941318 10.8215884 2.1836135 7.9384928 NA 5.9517883 11.3890929 7.7572520 7.9780211 NA 4.7381950 8.7496593 NA 3.3535350 -0.8162912 3.5055353 6.5844845 NA 10.2334536 NA 7.3881766 10.1551486 9.6884241 4.9649669 8.5929959 13.2176302 6.2279990 3.0904978 0.1835818 12.7169348 2.8840508 NA 2.7685655 0.1835818 14.125206 5.523455 8.459730 13.167222 9.934312 11.262089 13.383661 10.955507 8.436271 10.914924 13.886914 9.215651 9.094997 9.941828 NA 7.388177 11.469585 11.0859802 11.6051440 7.3128884 12.8708649 8.4315327 5.2059711 9.4620546 8.5499275 10.3299064 5.3930592 4.6430365 11.5153618 6.4027733 2.7685655 10.5515658 4.3128902 6.3160787 10.3109547 10.7309817 10.6088210 8.1054460 8.0196552 11.9235966 3.8274634 12.0762504 10.6218771 10.6119653 10.0259554 11.8001539 9.1651723 10.0045817 10.8386885 8.3231566 9.3231563 8.6294477 7.4315327 11.0133278 3.6430365 10.8161460 6.8489409 10.1807845 9.5389562 6.8274608 12.3678606 9.6067209 9.8373458 12.8400300 9.7032414 NA -0.8162912 10.4637959 10.0013882 9.5586446 TCGA-B6-A0WX 40 1 639 NA breast stage iiia t3 n1b m0 female 1998 NA no other, specify 9 black or african american not hispanic or latino 2 3 4 4 6 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7.282743e-07 2.774378e-07 20.6896551724138 6.89655172413793 13.7931034482759 31.0344827586207 27.5862068965517 10.0147727 9.0020243 10.6852889 7.9542917 9.1766840 8.9761843 9.1089394 9.9647320 10.8233359 12.8916677 10.2512991 10.2858934 2.4084945 12.0336867 2.4084945 10.6273224 7.1936022 8.5005017 9.3299156 10.4853153 NA 9.7489858 8.5954984 11.0259069 11.0295050 4.7096711 NA 11.5134728 11.1424835 3.4084945 8.8679314 7.4020451 0.9230351 3.6011498 9.5355728 10.0513251 10.5473201 9.9783554 9.6428039 10.7448469 4.5553438 6.5200073 14.7023409 7.6547993 9.2647030 11.8823504 10.9233547 5.5200073 5.1089384 8.8549924 10.9348592 0.9230351 10.8099888 5.1247086 5.8395490 4.8490735 9.4868413 11.6069448 9.9918512 12.1702884 12.7770062 9.7934377 11.4018425 10.8113260 10.8983477 10.3730470 3.3015876 11.6990124 10.8434258 0.1861202 10.3543616 10.2779835 3.6011498 4.6235099 12.6128089 9.7168388 10.1600438 10.1542941 4.2158572 7.4807280 13.2746195 12.9783554 9.7362128 9.9202524 1.3522000 1.3399000 0.0334450 0.0140870 -0.4669300 0.0030887 0.0205200 0.0128310 0.6440700 0.9207200 0.9134200 0.0199590 0.0265510 -0.4299300 -0.2053200 -0.2053200 0.0058675 0.9416500 -0.4749800 -0.4640600 -0.4692600 0.5152900 0.0237430 0.0237430 0.2625500 0.2907600 -0.4377500 0.0285180 -0.4457400 0.2651800 -0.0328240 -0.4287400 -0.4669300 -0.4669300 -0.4829900 -0.4829900 0.0205200 0.0128310 0.0223410 0.0265510 0.0605450 -0.4743500 0.0244450 0.0244450 0.0244450 -0.4516600 -0.4649100 -0.4649100 -0.4365600 -0.2053200 -0.2053200 -0.2053200 0.0058675 -0.4699000 -0.4699000 -0.4713800 -0.4640600 -0.4640600 0.2584400 0.0664100 0.5152900 0.0237430 0.0184180 0.2625500 -0.4377500 -0.3883600 0.8997500 -0.4218100 -0.4127500 0.000 0.000 -0.437 -0.437 0.000 0.000 -0.471 -0.464 -0.469 0.000 0.000 0.492 0.000 0.000 0.000 0.263 -0.175 -0.478 0.834 0.000 0.000 0.000 -0.422 0.000 0.000 0.000 0.000 -0.467 -0.467 0.000 -0.476 0.000 0.000 0.000 0.000 0.446 0.921 0.000 -0.452 -0.103 -0.103 0.000 0.000 -0.437 -0.437 0.000 0.000 -0.471 -0.464 -0.469 0.000 0.000 0.492 0.000 0.000 0.000 0.263 -0.175 -0.478 0.834 0.000 0.000 0.000 -0.422 0.000 0.000 0.000 0.000 -0.467 -0.467 0.000 -0.476 0.000 0.000 0.000 0.000 0.446 0.921 0.000 -0.452 -0.103 -0.103 7.9740101 0.6011260 6.3153905 10.3367008 11.4263024 6.6946420 10.3622805 9.0415365 8.6506938 2.1861202 11.6555796 11.7932280 2.6011498 NA 1.9230731 10.0383768 3.9230731 10.4841699 11.2891765 11.2158547 9.6352559 5.0105337 8.7971320 9.8755230 7.4213235 4.3290662 3.6455403 -1.3989691 10.2535417 4.7304280 8.3375470 6.9320612 8.2858937 9.6701111 11.2702513 4.3560311 8.4036610 4.6235099 7.8105980 12.3382865 8.5611466 7.3493379 -1.3989691 4.3015876 8.5755593 2.7710615 4.8299612 0.6011260 6.7559624 2.6011498 4.0274106 11.0388969 6.5259577 10.3585348 11.1136384 9.8383548 6.2806242 10.0115961 12.0650523 8.1804607 4.2735681 4.7710721 10.6655508 -0.3987789 6.9140275 1.7710827 5.7810528 12.166636 6.606769 7.954292 12.033687 9.632501 11.614293 10.485315 10.497477 9.116845 10.675955 13.486937 10.467265 8.854992 9.253093 NA 8.012656 11.483024 10.677292 11.117830 5.027411 14.406281 9.896914 7.537783 8.731715 8.595498 9.854892 7.248603 7.104971 10.251299 9.407694 5.820314 9.798361 9.989700 7.086008 11.948351 10.670930 10.577351 7.352689 8.347659 8.540724 7.189859 11.127972 10.547320 10.030028 10.162910 11.949043 10.489888 10.339659 10.442316 8.171001 5.612373 9.045922 8.723960 10.934859 8.116845 10.809989 7.640064 10.289435 9.486841 6.976445 15.201914 9.925325 10.560785 12.203380 11.560422 6.301584 1.186120 9.965280 9.311090 9.290269 TCGA-B6-A0WY 40 1 3461 NA breast stage iiia t3 n1b m0 female 1996 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 2 2 1 5 NA NA 3 4 2 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 3.467973e-08 25 16.6666666666667 8.33333333333333 50 0 9.65409501 9.66721836 11.45578893 8.84946015 8.52778232 8.97682529 9.52965797 10.09131518 10.30021927 14.25000189 10.94156801 11.02327337 -0.05844292 13.06531225 3.00046880 10.68303504 7.61163422 8.51268872 9.17598635 12.45587116 2.88017613 13.27881826 7.02194160 9.86535113 11.13735033 7.89770209 0.67852268 11.73741831 9.65294820 4.00045979 8.67627764 8.24838920 -0.64340542 4.08452354 9.45792461 10.06482722 9.99820580 11.65007718 9.44340525 10.57879666 8.87427504 10.74919132 15.25853305 6.70559921 10.16275234 11.00136315 11.36240550 5.57577520 3.74892274 9.37619638 12.87581177 NA 11.19816992 5.27546899 5.15102263 4.16395755 10.38796216 11.69742925 10.30861867 12.78070621 12.38666914 8.30204939 10.92051677 10.33745198 10.71278242 10.74084966 4.37897626 12.43875459 11.21594621 NA 10.31189224 9.41595003 4.86249603 4.00045979 11.36608431 10.16113995 10.11898765 9.87967744 4.26349269 9.21458650 12.88499861 12.34768445 9.86885218 9.81449931 0.06543400 0.06917000 -0.19993000 0.63233000 -0.19743000 0.21860000 0.22045000 -0.20118000 3.65690000 -0.42314000 0.93092000 0.00000000 0.01552600 0.00423600 0.41941000 0.41941000 0.21538000 0.21538000 0.14645000 0.22122000 -0.00020464 0.21492000 0.21492000 0.20832000 0.19170000 0.19170000 -0.22397000 0.60621000 -0.20033000 -0.20033000 -0.00048185 -0.19993000 -0.19743000 -0.19743000 0.22168000 0.22168000 0.22045000 -0.20118000 -0.20118000 -0.19976000 -0.20529000 -0.43653000 -0.12505000 -0.12505000 -0.12505000 0.15569000 0.01552600 0.01901600 0.00437490 0.41941000 -0.20852000 -0.20852000 0.21538000 0.21538000 0.21538000 0.17325000 -0.20864000 -0.20864000 -0.44183000 0.21922000 -0.21224000 0.21492000 -0.21521000 -0.21843000 -0.22397000 0.21016000 -0.21657000 -0.19506000 0.22662000 0.000 0.000 0.000 0.000 0.215 0.215 0.173 0.220 -0.429 0.219 0.219 -0.212 -0.004 -0.205 -0.205 0.192 0.192 -0.200 0.000 0.210 0.557 0.208 -0.195 0.000 0.000 -0.200 0.000 -0.197 -0.197 0.222 0.222 0.008 -0.201 -0.197 -0.197 -0.415 0.353 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.215 0.215 0.173 0.220 -0.429 0.219 0.219 -0.212 -0.004 -0.205 -0.205 0.192 0.192 -0.200 0.000 0.210 0.557 0.208 -0.195 0.000 0.000 -0.200 0.000 -0.197 -0.197 0.222 0.222 0.008 -0.201 -0.197 -0.197 -0.415 0.353 0.000 0.000 0.000 0.000 8.30934674 -1.64340542 5.62339283 11.05139868 11.94461742 6.77052911 10.50253767 9.87228565 8.84041130 NA 11.81629330 11.87283865 3.26350020 NA 2.88017613 8.76599645 4.62339283 10.36853156 11.50301514 10.06827257 9.23618884 0.67852268 7.97131535 10.25709503 6.96763091 5.01481499 -1.64340542 0.94155708 10.30497276 4.44407068 7.95279540 8.48459978 9.00406397 10.48194470 10.05964392 3.26350020 8.26499799 NA 7.95651846 12.80949025 6.75321006 8.02549064 NA 5.79954844 8.03079788 5.80781600 5.64200836 1.67852268 5.39002790 3.52893382 4.60453396 11.45447306 2.26348518 10.03476554 10.65953002 10.07085110 4.98596031 10.42672653 13.85267911 7.91502605 4.58542529 3.71415758 10.57547146 3.91119302 3.05705163 -0.05844292 2.60452210 13.0586158 5.3338852 8.5012640 13.0653123 10.3158831 10.3474186 12.4558712 11.5876767 9.1910765 10.6640910 12.8085893 11.2382931 9.3761964 8.7478492 -0.6434054 7.5854245 10.6919959 11.424376 11.967400 6.245349 13.665690 8.643163 6.433422 9.123134 7.803689 10.670622 6.660387 8.897702 10.941568 7.230049 2.057034 10.147768 8.151022 7.811255 12.405007 9.933562 10.129332 9.347419 9.432753 11.384166 5.546431 10.604471 9.998206 11.061806 10.122306 10.599482 10.351313 10.316607 10.787842 9.134683 -1.643405 9.223181 6.664945 12.875812 6.350959 11.198170 4.971314 10.790191 10.387962 7.053573 13.925363 10.100598 10.301684 12.960811 10.528095 3.000469 NA 9.903018 9.600375 9.306432 TCGA-B6-A0WZ 50 0 NA 6292 breast stage ii t2 n1b m0 female 1996 NA yes infiltrating ductal carcinoma 11 black or african american not hispanic or latino 1 1 3 1 NA NA 4 1 3 6 NA NA 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 5.548757e-07 7.69230769230769 61.5384615384615 2.56410256410256 17.9487179487179 10.2564102564103 10.1352015 8.5576494 11.2317313 8.3037328 8.5645622 10.0342390 10.6712064 9.3452697 10.5871421 13.0405745 10.5239989 9.9861363 1.1188248 12.9276876 0.8558303 9.7989239 6.0961374 8.5296621 10.1650720 13.1389693 1.8558303 13.6529171 6.5782897 9.5147486 10.5996477 6.9517475 0.5338623 8.6738811 9.8024370 -0.4661377 7.6450308 7.6810999 NA 3.4407795 9.0004812 9.6580163 10.1023261 12.1912134 9.4340070 11.0045538 11.1139179 12.0161988 14.2968739 7.8574679 10.3817353 10.2203955 10.9102917 4.5338935 3.7038205 7.0574568 11.8720742 NA 11.7920193 2.7818213 3.7038205 2.9262082 9.8030216 11.7673649 10.3380260 12.9947348 13.1956174 8.4437881 10.5314274 9.7460813 11.1058846 10.3805606 3.6213603 12.2735701 10.5676621 0.8558303 10.1582335 8.0807893 3.1224574 3.3412457 9.9758017 9.9029470 9.6772781 9.1113238 3.2343327 10.5871421 13.4167295 12.4259634 10.1009004 9.4902711 -0.00885260 0.57095000 0.00249690 -0.00581400 -0.00951810 -0.00774820 -0.01257600 -0.01257600 -0.00664320 -0.00664320 -0.00664320 -0.00041585 0.00027728 -0.00138580 -0.00138580 -0.00138580 -0.00429290 0.00000000 -0.01285100 0.57416000 0.00110930 -0.61374000 0.00305220 0.00305220 0.43598000 0.43598000 0.43598000 0.00666530 0.00221930 0.00221930 0.52398000 -0.00581400 -0.00166290 -0.01450300 -0.01099800 -0.01099800 -0.01257600 -0.01257600 -0.01257600 0.57309000 0.57309000 -0.00664320 0.36789000 0.36789000 0.36789000 0.36789000 0.00027728 0.00027728 -0.00138580 -0.00138580 -0.00138580 -0.00138580 -0.00429290 0.00000000 0.00000000 -0.01285100 0.57416000 0.57416000 0.00110930 -0.61335000 -0.61316000 0.00305220 -0.01464100 0.42654000 0.43598000 0.00666530 -0.00360110 0.01712400 0.01712400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.574 0.000 0.583 -0.613 -0.613 0.000 0.000 0.000 0.436 0.436 0.000 0.569 0.000 0.000 0.000 0.000 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.573 0.573 0.000 0.000 0.368 0.368 0.110 0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.574 0.000 0.583 -0.613 -0.613 0.000 0.000 0.000 0.436 0.436 0.000 0.569 0.000 0.000 0.000 0.000 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.573 0.573 0.000 0.000 0.368 0.368 0.110 0.110 9.0277504 NA 4.1486088 10.9288935 11.4157737 7.7052218 11.2721984 6.9423526 9.8960307 NA 12.7511711 10.3319374 3.6213603 2.3412457 4.2063228 6.8737455 0.8558303 11.3136143 11.8409535 10.4497744 9.5918868 1.7038095 7.7675144 9.8980296 5.6937657 2.1188580 4.2343327 NA 10.7044460 5.9933256 6.7138044 7.9726869 7.3730992 10.1462336 9.6345573 0.8558303 8.8158252 -1.4659384 7.3347953 12.6066138 8.1319475 7.8146658 NA NA 8.3250581 4.6213603 3.4407795 -0.4661377 0.5338623 6.3090106 -0.4661377 10.2596872 NA 7.4317408 10.4767760 9.6625338 3.7433534 10.0908799 12.5307215 5.6528364 1.7038095 3.1188580 12.2011174 3.8193003 NA 2.2343480 0.1188913 12.8428788 5.5999842 8.6358708 12.9276876 10.5090264 10.8611670 13.1389693 12.4244443 9.2089698 9.9554339 12.0844013 7.9411627 7.0574568 10.3319617 0.1188913 7.0961374 10.7980444 11.0586815 13.0573344 6.3020796 13.9005908 8.7347936 3.3918777 8.7959899 8.3017650 10.2283922 5.2887830 7.4646323 10.5239989 6.8146658 4.2618166 11.1607448 6.7335672 7.0029264 10.5057978 10.9219123 11.4338183 7.0574568 9.2686047 10.1179180 2.7038095 11.5509887 10.1023261 11.0050621 10.1894257 10.9750236 8.7566897 10.0096284 10.5834032 8.3185297 -0.4661377 9.4887819 6.0177104 11.8720742 1.8558303 11.7920193 6.7038205 11.0042996 9.8030216 6.3793853 13.6214407 10.3331766 10.3636177 13.0191583 11.3652022 NA NA 10.1103793 10.3675757 9.6113784 TCGA-B6-A0X0 54 1 3945 NA breast stage i t1c n0 (i-) m0 female 1996 NA no other, specify 0 white not hispanic or latino 1 1 3 NA 2 2 4 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.733986e-07 22.2222222222222 22.2222222222222 0 27.7777777777778 27.7777777777778 9.5154714 9.0876806 11.8961788 8.8553802 8.1364836 9.4409694 10.5472578 9.3221458 10.6413493 12.6812904 11.7701492 10.2221240 3.4422269 13.4316168 2.0796682 8.7681522 8.9951049 8.0503744 9.3873410 12.8798588 2.7317263 14.4841856 4.7958604 9.6901288 10.4829687 4.2722995 0.2722621 7.5249624 9.5817736 2.2722920 8.3221458 6.7399034 -0.7276184 3.0796512 9.2722974 9.7368431 9.7671529 11.8614803 10.1107134 10.7973287 6.3491122 11.6029341 14.8359405 7.9562391 10.0780412 11.6451624 10.9848243 4.1302802 3.4422269 8.4522062 12.0444057 NA 10.7480308 2.2722920 2.4422269 3.1791925 9.6429847 12.2570718 10.8162958 13.1085450 12.4790065 7.7193806 10.9985155 10.3015846 10.6527584 11.0820655 4.6646137 11.5047183 11.4490938 NA 10.2616918 9.2524369 2.4454354 3.4422269 12.1295008 10.2918881 10.3990018 9.0812616 0.8572644 10.0313533 12.1197462 11.9880449 10.3424183 10.1919056 1.06290000 1.08190000 0.00194180 -0.00800160 0.00000000 -0.00304750 -0.00443120 -0.00443120 -0.63377000 0.02440800 0.02440800 0.00402430 0.00402430 0.56688000 0.56688000 0.56688000 -0.00152430 -0.00152430 -0.00304750 0.00263570 0.00180300 -0.00346270 -0.00346270 -0.00346270 -0.00138580 -0.00138580 -0.00138580 -0.00152430 -0.00041585 -0.00041585 -0.00443120 0.00194180 0.00000000 0.00000000 -0.00304750 -0.00304750 -0.00443120 -0.00443120 -0.00443120 0.01112100 0.01112100 0.04145800 0.00597000 0.00597000 0.00597000 -0.00369960 0.00402430 0.00402430 0.56739000 0.56688000 0.56688000 0.56688000 -0.00152430 -0.00152430 -0.00152430 -0.00304750 0.00263570 0.00169970 0.00180300 -0.68833000 -0.00346270 -0.00346270 0.01014600 -0.00138580 -0.00138580 -0.00152430 -0.00304750 0.01293400 0.00664910 0.000 0.000 0.567 0.567 0.000 0.000 0.000 0.000 0.000 -0.045 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.063 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.567 0.567 0.000 0.000 0.000 0.000 0.000 -0.045 -0.636 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.063 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.2235818 NA 4.0271806 10.9215535 12.1652196 7.9808987 11.6763745 7.9420681 8.8578420 NA 10.6104766 10.5387794 2.9727294 0.2722621 2.9727294 8.9727372 3.6646194 9.2722974 11.7485373 11.0483190 9.4658227 7.0796522 7.9482545 10.5279161 5.6121460 1.2723219 -0.7276184 NA 10.8870072 3.8572644 5.8268866 8.8591372 4.9447226 10.6916993 11.0581584 3.5202211 8.9161536 1.5942141 7.8268859 13.6290244 8.2918881 6.8647544 NA NA 8.5964779 2.4422269 3.9161518 NA 3.6646194 5.2058695 0.8572644 10.8230441 0.2722621 7.7399028 10.9522172 9.7006575 5.1791886 8.0924765 11.2645276 6.6210262 1.8572644 2.4422269 12.7838029 0.2722621 NA 3.3597601 3.4422269 13.581489 5.316692 9.235193 13.431617 10.425849 11.547549 12.879859 12.586597 9.946490 10.584046 13.498333 12.656137 8.452206 8.564619 3.179193 7.557700 10.845945 11.3922111 12.1846253 7.8647544 13.9877221 8.9517775 8.5942253 9.5059169 8.6451623 10.7420816 5.1791886 6.9865429 11.7701492 5.6121460 1.2723219 10.2595613 8.5623161 5.5789961 11.9141233 10.0103896 10.4233139 8.9016540 9.0271847 11.8034351 4.2264931 10.9981024 9.7671529 10.2722974 11.1244366 10.4509622 9.2988207 9.8796277 10.7399029 9.5178501 NA 9.9165683 6.6646151 12.0444057 3.1791925 10.7480308 5.3808229 11.1137123 9.6429847 7.5202250 14.7333930 10.1564678 10.7551053 13.3614995 11.3108734 -0.7276184 0.2722621 9.7368431 10.2659434 9.7611416 TCGA-B6-A0X1 48 1 7455 NA breast stage iib t2 n1 m1 female 1994 NA no infiltrating ductal carcinoma 16 white not hispanic or latino 3 3 4 4 1 1 5 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.387189e-06 4.161568e-07 16.0714285714286 21.4285714285714 5.35714285714286 32.1428571428571 25 9.6846398 9.2355339 10.9549613 9.9478330 8.7073301 9.9454490 8.1703387 10.2059627 10.7778087 12.7413974 10.8252585 10.2765733 2.9278396 12.4390331 2.7054472 9.0891570 8.0333795 7.9213899 6.8619578 4.3299416 NA 10.5824812 9.0703169 9.2916045 10.9334697 8.3078424 3.5799163 10.7162140 9.9478330 1.4424393 7.5298811 7.3348096 -0.8793826 6.1648848 10.0934700 10.7787017 9.6741195 8.9116532 9.3896169 11.3784673 8.7016908 7.0213576 13.9167834 8.1613551 9.6567375 11.0916745 10.9842894 3.1204847 -0.8793826 9.6371751 10.1566638 NA 9.7305924 5.9533793 6.9342712 7.5213696 9.5891142 11.9430611 10.9402702 9.4636760 12.6223274 8.3565044 10.7688479 10.2497604 11.8568922 10.7844930 5.3379144 12.6190902 7.7425419 NA 11.3843463 10.1077543 2.1204847 4.5799223 7.7822683 10.0061866 11.3278097 10.8217967 -0.8793826 5.2079514 12.5013571 12.0911354 9.3517114 9.6352042 0.7784900 0.7480300 1.6708000 0.7889100 -0.0938500 1.5662000 0.5625900 -0.0838640 0.5784400 0.5784400 1.7714000 0.7671500 0.0542330 0.8697000 1.4205000 1.3830000 2.1219000 -0.0961050 -0.1410300 -0.0877120 -0.0900960 -0.1043400 0.5913400 0.6476300 0.0066653 0.7039200 -0.1362600 -0.1095900 0.7564300 0.0000000 -0.1248600 -0.0276710 -0.1182200 0.7394800 -0.1171300 -0.0863860 -0.1103700 0.6052100 -0.1171700 -0.1081500 1.5485000 0.5197800 0.8149300 0.8149300 1.4312000 -0.0564420 0.9725500 -0.1190000 0.8780700 0.7667600 -0.1002600 -0.1290100 0.6465300 0.7434700 0.7158400 -0.0809910 -0.0720070 -0.0720070 -0.0268510 -0.0213730 -0.1043400 0.5913400 1.3823000 0.0066653 -0.1208900 -0.1095900 -0.0820040 -0.1124700 -0.0986820 0.735 0.000 -0.100 -0.100 0.743 0.743 0.000 0.000 0.000 0.560 0.000 0.000 0.591 0.000 0.000 0.000 0.000 0.740 0.740 -0.110 -0.110 -0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.563 0.000 0.000 0.000 0.579 0.579 0.815 0.000 0.278 0.278 0.735 0.000 -0.100 -0.100 0.743 0.743 0.000 0.000 0.000 0.560 0.000 0.000 0.591 0.000 0.000 0.000 0.000 0.740 0.740 -0.110 -0.110 -0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.563 0.000 0.000 0.000 0.579 0.579 0.815 0.000 0.278 0.278 8.9985411 NA 7.0393534 9.6922429 11.6438072 6.0406645 11.5004101 8.6129444 8.1662771 NA 11.1669322 11.1059622 3.5799163 NA 3.9278491 8.8737071 4.6440524 11.5760743 12.6327369 10.9136871 10.0593347 8.4581121 9.2052987 9.8338768 5.8209295 10.0333796 0.1204847 1.1204847 9.9839022 3.2079553 8.7315152 10.3547089 4.5467525 10.0519665 10.2651485 2.2904244 9.0153080 6.6123437 8.6865443 11.2507390 7.7388759 4.9784702 1.4424393 2.4424128 7.7643462 3.2904097 1.7054472 -0.8793826 6.2290149 5.2412987 5.8209295 10.1049087 1.1204847 11.1247107 10.9310619 10.5696389 4.8209295 10.3948684 15.2079324 7.8686831 5.1204888 3.9784702 9.4412909 2.5799283 2.4424128 7.7679487 4.8209295 14.171827 9.766149 7.878714 12.439033 9.894454 11.101344 4.329942 5.834736 9.812234 12.106688 13.282960 11.566281 9.637175 7.624316 4.978470 8.389617 10.803046 11.0471569 11.5616189 6.0746874 13.4053845 8.6263019 7.2237778 8.7461992 10.2257440 9.5294993 7.7204030 4.4780399 10.8252585 10.9741897 NA 10.9446535 7.5467548 9.8843250 12.7482521 11.9384732 10.5957171 8.3149761 9.2446117 10.7593787 10.6640055 11.1092140 9.6741195 10.1635176 10.7152814 11.2003084 8.9908550 11.1313680 10.8091777 9.0949048 -0.8793826 9.7060256 7.0501632 10.1566638 5.2702374 9.7305924 7.6043064 10.7806511 9.5891142 7.8853620 12.8659545 11.2897889 10.3696037 13.2875163 10.8048006 1.7054472 3.8209346 10.3342021 9.6615868 9.1879246 TCGA-B6-A0X4 62 1 860 NA breast stage iib t2 n1b m0 female 1996 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 1 1 3 1 NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.387189e-07 41.1764705882353 17.6470588235294 11.7647058823529 17.6470588235294 11.7647058823529 10.9998702 9.9793467 11.5031288 9.3070004 8.6015101 7.7030903 11.3984913 9.8487448 9.8113188 13.5360522 11.4225811 10.5399186 3.2395661 12.1099309 3.7631247 9.8160505 7.9049019 8.6211090 9.8441193 13.6623536 3.7631247 14.4915293 1.5614972 9.8177500 10.3163817 7.9084509 NA 7.2450221 11.6710637 NA 6.5063528 6.3375987 NA 1.5614972 9.5716027 10.2880530 11.0830947 9.7020684 9.9128753 11.0069230 NA 10.5220755 14.2976001 8.9599301 10.4132371 11.3127035 11.2451907 4.4094928 6.1099309 8.8376185 10.1554455 NA 11.4051012 3.9400070 2.5614972 3.5614972 10.4318589 12.1915793 10.2941704 12.0813270 12.7833230 7.2948486 10.7792096 10.8380839 10.6663550 11.0893622 5.6489572 12.0785730 11.1321090 -0.7604798 10.1122410 8.9347945 4.3497616 2.8245235 10.5203369 10.1591744 11.0669088 9.3137075 -0.7604798 6.0597446 11.3316626 10.1569382 10.4069843 8.7274062 6.3964e-01 3.8826e-02 -1.1936e-03 -1.1936e-03 -7.2804e-03 2.4883e-02 0.0000e+00 0.0000e+00 7.4696e-04 7.4696e-04 3.6614e-03 -2.1632e-03 4.6338e-03 2.2730e-03 2.2730e-03 2.2730e-03 -1.0041e-02 -1.0041e-02 -6.7278e-03 -2.8555e-03 -8.4951e-05 -2.3017e-03 -2.3017e-03 -2.3017e-03 -4.5160e-03 -4.5160e-03 -4.5160e-03 5.3677e-05 2.1343e-03 2.1343e-03 -4.3777e-03 -1.1936e-03 -7.2804e-03 -7.2804e-03 2.4883e-02 2.4883e-02 0.0000e+00 0.0000e+00 8.8565e-04 6.2421e-02 4.8073e-02 7.4696e-04 -1.1936e-03 -1.1936e-03 -1.1936e-03 -1.1936e-03 4.6338e-03 4.6338e-03 2.2730e-03 2.2730e-03 2.2730e-03 2.2730e-03 -1.0041e-02 -1.0041e-02 -1.0041e-02 -6.7278e-03 -2.8555e-03 -2.8555e-03 -8.4951e-05 1.0896e-02 1.9955e-03 -2.3017e-03 6.0829e-04 -4.5160e-03 -4.5160e-03 5.3677e-05 -1.7477e-03 7.1365e-03 7.1365e-03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.7071717 NA 3.5614972 10.5180156 11.5264126 7.8554167 11.5433469 6.1052381 9.5224344 -0.7604798 11.3153795 11.5475581 9.1328678 2.4094996 2.2395813 8.5063528 4.5249663 9.0944346 11.3063280 10.8888223 9.4219605 NA 7.8542762 10.1305903 4.4874928 4.2395661 3.4094860 NA 9.5238119 2.4094996 7.0469210 8.0724564 3.2395661 10.4218922 10.8602442 2.2395813 7.6318835 NA 6.2839607 12.9111072 9.3943842 7.4194748 0.2395202 3.2395661 8.5110291 5.7153004 2.6989963 2.5614972 NA 5.5803053 0.2395202 10.0127054 0.2395202 7.2339197 10.6489571 9.9286905 3.8834253 9.4898646 12.2067924 5.4874928 2.9399976 4.4490198 11.9888070 2.6989963 -0.7604798 6.3893138 NA 14.072686 3.698996 8.922561 12.109931 10.620027 10.612431 13.662354 13.912875 9.188225 10.011881 12.542062 11.424751 8.837618 8.275740 1.239581 7.434323 10.198844 10.6425781 12.3932765 7.3893130 13.6892926 8.9657843 3.4094860 9.0404659 8.2507934 9.7605481 3.3270262 9.1404328 11.4225811 6.8394784 7.8431925 12.0607422 6.9606658 5.7339806 10.6835457 9.6835456 11.1256437 9.3476592 8.8338907 10.1137790 1.8245235 12.0459949 11.0830947 10.6897464 9.9408727 12.1776754 8.6658308 9.6265063 10.7428950 9.3336438 NA 9.5109358 6.2626004 10.1554455 -0.7604798 11.4051012 9.1022035 11.9086727 10.4318589 6.9469250 14.5047020 10.7572355 10.4151157 12.9925739 9.5569788 NA NA 10.5982173 10.0920956 10.3623942 TCGA-B6-A0X5 61 1 2097 NA breast stage iib t2 n1b m0 female 1995 NA no infiltrating ductal carcinoma 3 black or african american not hispanic or latino 1 1 3 1 NA NA 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 3.467973e-07 25.9259259259259 25.9259259259259 3.7037037037037 11.1111111111111 33.3333333333333 10.19043869 9.37236819 11.32268649 9.10729738 8.80208333 9.92162199 10.09871365 10.26795521 9.06511774 13.90598069 5.97954295 11.09809856 NA 11.62018857 -1.09727036 8.63574170 2.71008456 9.08263554 10.57426739 13.56216482 -1.09727036 13.43860918 5.85692346 9.83941577 11.17389752 6.77924265 -1.09727036 6.77924265 12.35895237 -0.09727036 8.50077895 8.74035420 NA 0.48769214 9.36931270 10.48109900 10.22690682 10.48298488 9.77386153 11.04387549 7.24257678 11.13933851 13.61820576 8.02695107 9.25253819 11.57493065 10.73125954 3.42629160 NA 7.95529420 11.86146025 NA 11.63616541 3.22465773 4.22465773 3.90272964 6.62382590 12.12642639 9.57249712 10.70200797 12.73838202 7.80057186 11.06070478 10.60337840 11.23895389 10.84083566 5.29504339 11.65907416 10.32689256 -0.09727036 9.91395360 9.56895041 3.22465773 4.03201266 11.22662551 9.49891601 9.57515158 10.11400633 2.90272964 11.16775526 11.94198813 11.64671917 9.74821634 8.97016055 -0.00446140 -0.00446140 -0.00197010 0.00260540 0.00091584 0.01653500 -0.00335450 0.00218900 0.90754000 0.90754000 0.91052000 0.00163400 0.00163400 0.00357730 0.00357730 0.00357730 0.00875490 0.00875490 -0.96797000 0.01499800 0.00274420 -0.01485800 -0.01485800 -0.01485800 -0.03343500 -0.03343500 -0.03343500 -0.00446140 -0.00446140 -0.00446140 0.01360100 -0.00197010 -0.01106900 0.00538360 0.01653500 0.01653500 -0.00335450 0.00218900 0.00218900 0.01765300 0.00107910 -0.96611000 -0.00606430 -0.00773220 -0.00321610 0.00232780 0.00163400 0.00163400 0.00357730 0.00357730 -0.00446140 -0.00446140 0.00875490 -0.01307500 -0.01307500 -0.93400000 0.01499800 -0.01453300 0.00000000 0.01499800 -0.01485800 -0.01485800 0.02395600 -0.03343500 -0.03343500 -0.00446140 0.01429900 -0.04834500 -0.06235900 0.000 0.000 0.000 0.000 0.000 0.000 -0.934 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.966 -0.059 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.934 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.966 -0.059 0.000 0.000 0.000 0.000 8.7260935 NA 1.7100846 9.7669125 10.9139536 6.9938974 9.9552943 8.5128838 7.9444403 -1.0972704 11.1907272 12.0677134 2.0726546 NA 3.9471238 5.5465827 2.3621613 9.5830858 11.3950803 9.8148671 9.5839647 6.9139533 8.0676333 9.7237031 5.0726504 2.4876921 3.7607106 NA 10.2178759 8.1530245 10.1417281 8.5044972 2.3621613 9.2480651 10.0040454 2.2246577 9.0950190 NA 5.0726504 12.8587394 8.5044972 5.9688165 NA NA 8.8081134 NA 3.8569259 -1.0972704 1.2246577 2.0838261 -1.0972704 10.7807773 2.3621613 10.7994371 10.1583451 9.6700831 2.3621613 9.9104545 11.5132898 6.8569222 1.7100846 0.9027296 11.4944824 0.9027296 0.4876921 2.7100846 NA 12.448380 4.394583 8.894248 11.620189 9.472582 9.433133 13.562165 11.420396 9.361543 10.402572 12.155540 8.700388 7.955294 8.204222 5.011250 8.160114 10.103625 11.09902110 11.72927481 8.74664733 14.08360401 8.66593881 2.36216126 9.08387871 10.07765198 9.72108483 4.39458274 9.69307482 5.97954295 4.80961509 1.22465773 10.47779277 7.68736099 9.09179714 8.71810951 6.90272602 10.46782836 5.99019021 8.41447891 10.83789138 3.15065715 12.22716848 10.22690682 10.15952475 10.21617631 9.45058485 8.48015524 9.92994127 10.44865610 9.09994291 NA 8.87188245 9.74125276 11.86146025 3.42629160 11.63616541 6.23364268 10.30573836 6.62382590 7.22465484 13.05112346 10.32321299 11.21787587 12.12038117 10.05247350 -0.09727036 NA 10.50170933 10.39658177 9.73086273 TCGA-B6-A0X7 62 1 1781 NA breast stage x t1c nx mx female 1994 NA yes mixed histology (please specify) NA white not hispanic or latino 2 2 3 1 NA NA 3 4 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 1.733986e-07 50 0 0 35.7142857142857 14.2857142857143 10.0429264 9.9194852 11.8930344 9.0977393 8.6851104 8.9985910 10.8087096 9.4610122 10.0813758 9.6964961 11.4938396 10.3477585 4.4347750 13.2575853 4.0120859 8.8498117 7.4376339 8.8095376 10.1777386 13.5074704 1.4338675 14.4512951 4.9966509 9.3372997 11.0836596 5.6173661 NA 10.9565927 8.0386946 2.9810489 8.1263792 6.9927696 -0.5424582 4.6669497 9.6553254 10.0781723 9.0877614 11.8132583 9.9603261 11.1134722 1.4574892 11.4038524 14.7567560 7.0448214 10.2466203 10.8615714 11.2527223 5.2519084 6.6173661 8.8017901 10.6784772 -1.5424582 11.1076485 7.8605066 4.6072415 4.6473203 9.8188899 12.1375241 10.4308329 11.6470100 12.7663310 8.8551690 11.0562447 10.8526133 11.2604145 11.2308396 4.9652902 12.2145717 13.0599032 -1.5424582 10.3143088 9.3247730 4.2406883 3.5449552 10.3045517 10.0777141 10.1841382 10.2277452 3.3154793 8.2140505 12.4531731 12.9153240 10.4149592 10.3785914 0.4751200 0.7655600 -0.0024938 -0.0024938 0.0040243 0.0223710 -0.0019399 -0.0140900 -0.0642400 -0.0642400 0.6864500 0.0031943 0.0174040 -0.0912870 -0.0283110 -0.0283110 -0.0083005 -0.0083005 -0.0015243 0.0102850 -0.0488830 -0.4752200 0.0141900 0.0141900 0.0227250 0.0227250 0.0227250 0.0244080 -0.0548250 -0.4916200 0.0000000 -0.0024938 0.0040243 -0.0070576 0.0223710 0.0223710 -0.0019399 -0.0019399 -0.0140900 -0.5194800 -0.0024938 -0.4885800 -0.0018730 -0.0018730 0.0019418 0.0019418 0.0174040 0.0150280 -0.0912870 -0.0912870 -0.4997500 -0.4997500 -0.0083005 -0.0083005 -0.0083005 -0.0015243 0.0102850 0.0102850 -0.0488830 -0.4905700 -0.4861700 0.0141900 0.0112610 0.0227250 0.0227250 -0.0458370 -0.3239200 0.0566700 0.0255310 0.000 0.000 0.000 -0.408 0.000 0.000 0.000 0.000 0.000 0.000 -0.446 -0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.475 0.000 0.000 -0.324 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.424 0.686 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.408 0.000 0.000 0.000 0.000 0.000 0.000 -0.446 -0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.475 0.000 0.000 -0.324 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.424 0.686 0.000 0.000 0.000 0.000 8.17517077 NA 5.61736608 10.86157145 10.97590155 6.76806123 11.62161556 8.94148138 8.72895719 3.62742007 11.81806708 11.18066457 4.29038754 2.70542504 4.91692563 8.43477416 3.36439033 9.87534681 11.52526474 10.81943803 9.38379025 3.50188494 7.97909475 10.28046341 5.94131058 7.70304670 NA NA 10.32361405 6.78841166 7.53163566 8.03869461 6.38823087 10.76007612 10.88873069 1.62742007 8.48954013 -1.54245824 8.58935115 13.19706397 9.46872158 8.25677575 -1.54245824 3.21238257 9.29905870 NA 4.76127463 0.04250426 3.36439033 6.44617847 1.62742007 10.17517077 2.04246924 9.32090635 10.60597086 9.71134175 4.96529022 9.26726236 12.11648673 7.90870545 1.77942783 3.88375765 10.82053393 NA NA NA 2.84981916 12.833552 3.411684 8.761275 13.257585 10.519540 10.857840 13.507470 12.334107 8.531796 10.405862 12.806568 10.390816 8.801790 11.000284 NA 7.440488 11.163343 11.030195 11.646547 6.429038 14.506190 8.457494 4.238856 9.452555 7.918974 10.648350 5.115707 6.034922 11.493840 6.988876 4.849814 11.149456 9.040577 5.446405 11.459958 10.187115 10.606924 8.365887 7.877455 11.431909 6.094120 11.678494 9.087761 10.538312 10.004871 11.337269 9.709568 10.542635 10.526608 8.309244 NA 8.737140 7.560782 10.678477 6.034922 11.107649 6.921019 10.591279 9.818890 7.274478 13.944455 10.081833 10.237624 12.420481 11.224230 NA 3.883758 10.875610 9.917950 10.391922 TCGA-B6-A1KC 67 0 NA 1326 breast stage iib t2 n1 m0 female 2003 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 5 1 NA NA 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 22.7272727272727 13.6363636363636 9.09090909090909 36.3636363636364 18.1818181818182 11.17375364 10.44495213 11.06333420 9.55724331 9.08104690 7.39746843 9.75481854 8.76874740 9.09642211 14.42081202 6.95925780 10.75347217 0.95173698 12.11373546 7.05679918 7.38360926 6.25554416 8.53421961 9.11667068 13.41004226 0.36681177 15.21914794 NA 10.22982606 10.97574911 9.81440110 NA 8.13663898 9.83440689 2.06722567 6.66142183 5.95925780 NA 4.82623322 10.37593009 10.54515494 10.78834020 10.08276325 9.54172700 11.61413550 -0.04826302 10.90450510 14.13449439 9.01417868 10.26879952 12.68816576 11.73585333 5.72435286 4.70665211 9.84708664 9.59321351 1.82623322 10.97135451 6.57137192 5.43288927 3.45426803 10.23330750 11.91742788 9.92665640 9.34836854 12.81388454 9.42072723 11.51718331 11.27248539 10.82725719 10.60401126 6.01785289 11.91261046 12.48558021 NA 10.20600506 9.59742223 3.12755074 5.12168684 10.59922228 9.28789842 10.85086895 10.64263479 1.36681177 6.05330252 10.80948567 10.20087728 10.33402753 8.83338759 1.06050000 1.06050000 0.67170000 0.67133000 -0.13864000 -0.02376300 1.22020000 -0.70176000 3.65690000 3.65690000 1.23720000 0.19286000 0.22510000 -0.04352600 -0.06234000 -0.06234000 0.56411000 0.56020000 -0.71526000 -0.49146000 -0.23746000 0.65950000 0.65950000 0.68827000 0.31106000 0.31106000 0.31764000 0.42916000 -0.56718000 1.06050000 -0.19914000 0.67170000 -0.16727000 -0.13864000 -0.02376300 -0.02797400 1.22020000 -0.70176000 -0.73244000 0.00000000 0.00063263 -0.72962000 0.23073000 0.23073000 -0.72212000 -0.72212000 0.22510000 0.24397000 -0.04352600 -0.06234000 -0.03014400 -0.04626700 0.56411000 0.56020000 0.56020000 -0.67669000 -0.51958000 -0.51953000 -0.23746000 -0.25012000 0.65950000 0.65950000 0.45132000 0.31106000 0.31764000 1.06830000 -0.71332000 0.64022000 0.73882000 0.198 0.198 0.000 0.000 0.560 0.560 -0.715 -0.520 -0.237 -0.250 -0.250 0.660 0.660 0.451 0.451 0.311 0.311 0.213 1.060 1.068 1.068 -0.713 0.640 -0.197 -0.197 0.700 0.700 -0.153 -0.153 0.000 0.000 0.578 -0.642 0.000 0.000 2.927 3.657 0.204 -0.518 0.000 0.000 0.198 0.198 0.000 0.000 0.560 0.560 -0.715 -0.520 -0.237 -0.250 -0.250 0.660 0.660 0.451 0.451 0.311 0.311 0.213 1.060 1.068 1.068 -0.713 0.640 -0.197 -0.197 0.700 0.700 -0.153 -0.153 0.000 0.000 0.578 -0.642 0.000 0.000 2.927 3.657 0.204 -0.518 0.000 0.000 8.0250127 NA 4.4753249 9.1465206 9.9347574 6.1921409 9.7548185 10.3918163 8.4658859 -1.6330764 12.0918480 11.2692819 4.0106545 NA 4.2247812 9.3440813 4.7243556 8.5454661 11.2381291 11.0061420 10.1542959 1.9517743 8.1837847 9.9347574 6.2060043 3.5762561 NA NA 9.6016187 5.8506169 3.7930635 7.6954761 9.6288962 9.8872727 11.1783767 4.0106545 7.4595587 1.1741507 7.3780286 12.9373686 8.9498842 7.1048933 -1.6330764 8.6300705 9.4824952 NA 8.1579643 0.3668118 2.8903689 6.5160404 1.1741507 9.5442209 NA 7.2122911 10.9625250 10.6536478 5.7761935 11.1401466 11.4540984 7.9252221 2.8262332 2.4542549 11.9289245 5.3093145 -1.6330764 4.0106545 3.9517650 13.263158 5.642927 8.572595 12.113735 9.320270 10.822385 13.410042 12.388996 8.867096 11.160405 12.564172 11.423947 9.847087 8.234080 1.688717 8.255545 13.574235 9.935707 10.408118 8.695476 16.467134 9.068108 2.614733 9.929521 9.609975 9.250590 4.614728 7.840507 6.959258 6.400224 NA 10.253641 2.067226 6.993387 12.171437 9.111635 10.437593 8.797254 7.679684 11.443784 3.010655 13.310838 10.788340 9.907898 9.554772 11.937606 7.974132 11.354953 10.131258 9.164463 NA 7.944683 6.326803 9.593214 2.454255 10.971355 5.121687 10.291614 10.233307 7.261619 14.282607 9.830837 10.699118 12.461704 9.210722 NA 1.688717 11.761264 10.161623 9.539229 TCGA-B6-A1KF 68 0 NA 3088 breast stage iib t2 n1 m0 female 1998 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 4 4 NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.005712e-06 4.508365e-07 16.6666666666667 35.7142857142857 4.76190476190476 21.4285714285714 21.4285714285714 9.13466529 9.62546448 11.33201232 8.08395208 8.69470019 8.94392865 9.40336040 10.83930600 11.07384580 14.35171945 9.32670249 10.99737434 5.03008442 15.31667665 2.38097874 7.76076452 5.36450590 9.78729418 5.00902463 5.95498492 NA 11.74054251 9.16830156 9.47457577 11.96167939 6.45294295 NA 5.53627053 11.81068461 1.50650039 7.65288010 7.41341384 NA 4.41341130 9.68311217 9.92928904 9.93906536 10.09711049 9.04568213 10.84748625 -0.07841133 5.36450590 14.64410169 9.60699309 8.89740895 10.90562332 10.93068974 5.34782508 1.24348630 9.22990007 10.16473487 NA 10.87830010 2.50652578 8.13344948 2.50652578 10.48951705 11.92525452 9.71841180 11.23812531 12.40625800 8.58333893 10.93767278 10.34467684 10.93976116 10.18834751 4.05084122 11.63279772 9.53166295 4.75444928 10.28076138 10.86517464 3.74734443 1.72892183 9.68144909 9.34362568 9.91237397 10.61722427 NA 8.84785695 12.04309446 11.94149909 10.62459937 9.07257747 2.5164000 2.4444000 0.0249480 0.4976700 -0.0109420 0.9816000 0.5108700 -0.0079067 -0.5295200 0.4708100 2.3043000 2.3902000 0.0042816 -0.5101400 -0.5101400 -0.3750600 -0.5063100 -0.5063100 -0.5039900 -0.5239100 -0.5317900 0.0544970 3.6569000 -0.4627600 -0.5081700 -0.5081700 -0.4697300 0.4381500 -0.4918400 -0.5111800 0.0078969 0.0249480 -0.0109420 -0.0109420 -0.5344100 -0.5334900 0.5108700 -0.0079067 -0.0140040 0.0179430 0.0194820 -0.5408000 0.0193420 0.0193420 0.0193420 0.0462540 0.0042816 0.0042816 -0.5101400 -0.5101400 -0.3750600 -0.3750600 -0.5063100 -0.5063100 -0.5118900 -0.4938200 -0.5239100 -0.5239100 -0.5146700 0.5836000 0.0544970 -0.4627600 -0.5422500 -0.4310700 -0.4697300 -0.0165870 0.4978500 0.0756820 0.0756820 1.312 0.000 -0.510 -0.510 -0.506 -0.506 -0.493 -0.524 -0.515 0.584 0.584 0.818 -0.463 0.000 -0.506 -0.470 -0.470 -0.492 1.953 0.000 0.438 0.517 0.000 0.000 0.000 0.000 0.473 0.000 0.000 0.000 -0.518 0.511 0.000 0.000 0.000 1.710 2.239 0.000 0.000 0.212 0.042 1.312 0.000 -0.510 -0.510 -0.506 -0.506 -0.493 -0.524 -0.515 0.584 0.584 0.818 -0.463 0.000 -0.506 -0.470 -0.470 -0.492 1.953 0.000 0.438 0.517 0.000 0.000 0.000 0.000 0.473 0.000 0.000 0.000 -0.518 0.511 0.000 0.000 0.000 1.710 2.239 0.000 0.000 0.212 0.042 8.75445095 4.50652578 7.98765001 10.30364458 11.34125784 5.77954077 11.75049078 9.10178085 7.97684361 NA 12.79385107 11.78744112 3.82844880 NA 3.77954340 9.74014318 2.82844880 6.71597709 10.81372428 11.80821018 9.86407546 0.50650039 8.27470754 10.33835845 5.05084557 9.85967020 NA 5.00902463 10.52704052 0.92158867 5.53627053 8.00902407 7.39729471 9.27911304 11.60915532 -1.07856367 7.97684361 3.56541439 7.59751777 12.39488620 6.34782508 9.26696616 NA 5.56541744 10.39374406 4.85229853 4.16949213 2.24348630 -0.07841133 2.62199323 3.77954340 10.57216397 4.09148828 9.72811065 11.11693314 10.02288016 4.59398713 10.83220370 10.14737094 6.14072958 2.50652578 1.24348630 9.64948146 2.92156963 9.42637987 -0.07841133 6.57261232 11.518217 7.840424 9.384063 15.316677 9.353059 11.845074 5.954985 9.024849 8.869928 9.837440 14.155929 12.228762 9.229900 6.869928 -1.078564 7.216181 11.356971 11.38201683 11.08678204 5.47614835 13.60991781 8.79192572 9.35410279 9.46265747 8.53994626 10.81231162 2.24348630 5.67644796 9.32670249 5.44512413 -1.07856367 9.48093800 8.89597539 8.98977482 11.62438296 10.11385375 10.85783081 6.87575672 7.42538629 6.82845134 1.92155058 11.63295259 9.93906536 9.66639481 9.66134148 11.65457629 11.89651322 10.79308124 10.76037091 8.36450459 0.92158867 8.91180691 6.36384039 10.16473487 4.85229853 10.87830010 5.81637955 11.23416885 10.48951705 7.15585142 13.23968004 9.93418548 10.28733654 11.85118922 10.50980706 NA -0.07841133 10.16115948 9.36450437 9.68726142 TCGA-B6-A1KI 63 0 NA 2236 breast stage i t1c n0 m0 female 2003 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 1 NA NA 4 4 3 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 2.080784e-07 18.75 12.5 0 31.25 37.5 9.3801866 9.7108550 11.3584242 9.2359974 8.6698665 9.0820428 10.0991255 9.3132236 10.4616956 13.8052247 10.8312199 10.5628314 5.8676988 13.4751040 2.6905065 9.0552380 5.6822868 8.2781985 8.6115357 13.1659634 0.8160672 13.7505881 9.3610015 9.9325890 10.1658712 6.0890553 NA 7.4694790 9.9289111 2.1379625 7.6255372 7.0765644 NA 6.3655018 10.4577879 10.1148635 10.6292839 11.0212195 10.2795615 11.5050159 0.2310637 11.0343986 14.3698264 9.5246498 9.0050381 12.2673342 11.2179833 3.1379625 5.6404648 8.6864018 11.1545879 1.5530164 10.6716844 4.5709243 3.3603643 3.1852640 10.3513125 11.9004027 10.4460009 12.1245658 12.6282813 8.3590691 10.2651858 9.9684446 11.0742106 10.5963035 5.2644989 11.1577413 9.5880767 NA 10.3330503 8.7309205 3.0900574 3.3603643 10.8798816 9.7224267 10.1885395 9.1794419 3.4010024 9.2617419 12.3585048 11.3201941 10.0746032 9.2548290 0.508220 0.529760 -0.125120 -0.109420 -0.108410 0.229310 0.063223 0.065656 0.022985 0.022985 0.023426 -0.170560 -0.170560 0.137910 0.137910 0.137910 0.143250 0.142670 -0.169290 -0.125970 -0.147920 0.134950 0.134950 0.141170 0.108180 0.108180 0.108180 0.311770 -0.143100 -0.143100 -0.120040 -0.125120 -0.121570 -0.108410 0.219350 0.219350 0.063223 0.065656 0.082604 0.051530 0.051530 0.037500 0.177840 0.177840 0.177840 0.142800 -0.170560 -0.170560 0.145190 0.137910 0.137910 0.137910 0.143250 0.142670 0.123290 -0.169290 -0.125970 -0.151190 -0.139490 -0.337560 0.134950 0.134950 -0.443720 0.108180 0.108180 0.315940 0.161900 -0.049559 -0.049559 -0.171 -0.171 0.138 0.138 0.143 0.143 -0.169 -0.126 -0.139 0.349 0.044 0.135 0.135 -0.444 -0.444 0.108 0.108 -0.143 0.365 0.316 0.316 0.162 0.000 -0.122 -0.122 -0.109 -0.109 -0.108 -0.108 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.178 0.178 0.000 0.000 -0.171 -0.171 0.138 0.138 0.143 0.143 -0.169 -0.126 -0.139 0.349 0.044 0.135 0.135 -0.444 -0.444 0.108 0.108 -0.143 0.365 0.316 0.316 0.162 0.000 -0.122 -0.122 -0.109 -0.109 -0.108 -0.108 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.178 0.178 0.000 0.000 8.2520546 -1.7690592 7.2890663 9.6956205 11.0771527 7.3723392 11.4097395 9.5202867 9.2137616 1.0384362 11.6945990 11.4813212 4.0124346 3.9035011 3.5164817 8.6006719 5.2863563 9.9184503 11.7559836 10.6044836 9.6039397 7.7408500 8.1167712 10.1064401 7.6404655 7.4453940 NA NA 11.4418982 6.6615273 7.2809229 8.0998974 7.9623934 10.0209302 10.4613953 4.6740199 7.5820140 -1.7690592 8.2040546 12.1595930 8.6308867 9.1845436 NA 7.3291065 8.3422103 -0.7688134 6.2917711 -0.7688134 1.9315318 6.0934651 1.4009750 10.2675917 0.8160672 8.2154932 10.6409959 10.0832140 6.5118459 10.2985091 11.3457930 6.3185374 1.2310637 3.5886247 11.7539014 6.2423014 NA -0.7688134 1.0384362 13.148611 6.173589 8.366784 13.475104 10.116008 11.231603 13.165963 12.014380 9.246406 10.531141 13.068604 8.193971 8.686402 9.005862 NA 7.588627 11.880443 10.9491794 11.4869884 7.8047215 14.6992365 9.0033892 4.0890574 8.8393295 8.4393090 9.9754923 4.9725410 6.9453198 10.8312199 6.6276798 2.4010024 10.7336579 6.0124346 6.0818871 11.0234583 10.3142216 10.5563801 8.4196636 8.6562904 12.3492858 3.9589911 12.3556217 10.6292839 10.3843100 9.9971894 11.7722923 10.0283309 9.5359963 10.6643993 9.3205251 -1.7690592 9.6522821 8.3797929 11.1545879 3.0384362 10.6716844 7.5530026 10.4025642 10.3513125 6.7507110 12.9696420 10.1950545 10.9917946 13.0449060 9.7224267 -1.7690592 -0.7688134 10.0820428 10.2307224 9.8758323 TCGA-B6-A1KN 57 0 NA 4233 breast stage iiib t4b n1 m0 female 1998 NA yes infiltrating ductal carcinoma 24 white not hispanic or latino NA NA 1 2 NA NA 2 2 6 5 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 1.387189e-06 2.774378e-07 14.2857142857143 20.4081632653061 0 34.6938775510204 30.6122448979592 10.5197199 10.5794726 11.6404093 10.0206525 8.5432991 9.4000358 9.4477831 10.4127386 9.0518862 14.4652700 10.5427353 11.2098781 3.6136849 16.8910760 4.0542581 8.1986508 5.7836138 8.9895552 6.0415496 12.8090898 -1.7784322 13.8678733 2.7449361 9.1791985 11.6315572 7.6910127 3.4308205 7.2874603 11.8025715 2.3088268 6.6971038 7.2793626 -0.7786797 4.4111957 10.3500096 10.4311288 9.6179756 10.9078714 9.7410071 12.0363538 NA 9.7400241 13.9670189 8.9381131 9.1417237 11.1114451 12.0581116 4.4501885 5.0027295 9.5871465 11.6865546 -1.7784322 10.8966664 4.3088341 5.9492921 3.8360857 10.6694872 11.8640995 9.6859167 11.6982436 12.8869844 6.2820672 11.4811141 11.1019148 11.0863308 10.8056288 4.2874575 11.9819869 11.2611467 -0.1936347 10.2867870 9.9556572 3.5222316 4.5612223 11.1624185 10.1799236 9.9624164 10.4277748 2.8652260 9.1342602 12.8567489 11.3217047 9.8764543 8.9670452 0.995780 0.057841 0.054279 0.062697 -0.058284 0.045895 -0.047893 -0.614760 3.656900 1.702300 2.082700 -0.255360 -0.255360 -0.200330 -0.200330 -0.200330 -0.598050 0.050295 -0.517630 0.148950 0.084255 -0.574950 3.656900 -0.223510 -0.508130 -0.208920 -0.208920 0.316320 -0.575550 -0.589870 -0.185840 0.054279 -0.058284 0.048023 0.050011 0.050011 0.138250 -0.614760 -0.614760 -0.605230 0.060268 -0.618020 0.068997 0.068997 0.068997 0.068997 -0.255360 -0.255360 -0.261390 -0.200330 -0.284500 -0.284500 -0.570780 0.050295 0.050295 -0.512150 -0.596110 -0.600090 0.041745 0.077175 -0.573050 -0.223510 0.000000 -0.492630 -0.208920 -0.244070 -0.245660 -0.104840 -0.548410 -0.255 -0.255 -0.261 -0.261 -0.571 -0.571 -0.518 0.149 0.000 0.000 0.000 -0.571 -0.571 -0.221 0.000 -0.508 -0.508 -0.584 0.000 -0.244 0.072 -0.246 -0.548 0.000 -0.186 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.567 0.000 0.000 -0.618 0.000 0.000 0.000 -0.417 -0.417 -0.255 -0.255 -0.261 -0.261 -0.571 -0.571 -0.518 0.149 0.000 0.000 0.000 -0.571 -0.571 -0.221 0.000 -0.508 -0.508 -0.584 0.000 -0.244 0.072 -0.246 -0.548 0.000 -0.186 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.567 0.000 0.000 -0.618 0.000 0.000 0.000 -0.417 -0.417 8.6539127 1.0287106 8.4501897 9.4074851 11.3005223 6.3371955 10.5808459 10.7818996 7.3008559 2.1282604 12.7578002 11.6633981 1.6808194 NA 3.2213667 7.9061198 3.2213667 10.6096573 11.4725574 11.3380397 9.6679374 -0.7786797 7.6643143 9.4846401 6.0157875 6.5700986 2.9762536 NA 10.7304036 7.6622397 5.9560799 7.4881575 5.9008499 9.0122080 10.8128933 1.6808194 8.0255017 NA 8.7072000 12.0303350 8.0415496 7.4928338 -0.7786797 4.9078713 8.1842669 2.6807969 3.8937990 NA 5.0027295 4.0572943 1.6808194 10.6562597 -0.1936347 8.8351605 10.5695458 10.0617554 4.1282604 9.8800287 13.1544621 7.4811140 3.4692999 3.3506528 12.0519851 0.5432979 NA -0.7786797 1.5432979 12.5694766 6.7912267 8.5974962 16.8910760 9.5393486 10.5404784 12.8090898 11.2331223 9.3028543 10.4642473 13.9172244 9.7566462 9.5871465 8.3390140 0.5432979 7.6007492 11.6265123 11.039554 12.136783 2.806324 13.053517 8.486986 6.198651 9.367303 8.752752 10.990525 5.066860 8.406246 10.542735 6.651824 3.391300 10.320719 7.930455 9.529061 11.009069 10.546114 10.255826 8.450190 7.416128 11.854252 5.232599 11.912254 9.617976 10.069211 9.854366 10.784567 9.471669 10.333485 11.466775 9.367303 8.927867 9.409051 7.669156 11.686555 6.249277 10.896666 5.962838 10.373022 10.669487 6.959463 12.905243 9.746892 10.433259 12.487865 9.839297 2.028711 2.921817 10.453192 9.909184 10.024695 TCGA-B6-A2IU 62 0 NA 5176 breast stage iia t2 n0 m0 female 1998 NA yes infiltrating lobular carcinoma 0 white hispanic or latino NA NA 1 1 2 2 4 4 4 8 6 2 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1.005712e-06 3.121176e-07 26.3157894736842 26.3157894736842 2.63157894736842 23.6842105263158 21.0526315789474 10.095630 9.389611 12.105078 8.771805 9.015731 9.229510 10.948044 8.841290 10.564852 9.709992 8.931145 10.647999 3.693799 13.775656 4.771806 8.611340 7.529502 8.258587 9.409574 13.008826 1.845791 14.931245 4.653163 9.842601 11.293715 9.084210 2.331247 9.306876 8.848058 1.108826 6.663429 5.966820 NA 4.167735 9.827658 9.815048 10.613990 11.620263 8.911895 11.284182 11.690668 10.825374 14.621292 5.929360 10.189214 11.590639 10.631748 5.406520 4.278765 9.190989 13.748181 NA 10.730892 4.167735 3.611338 4.881430 9.571002 11.597350 10.674260 11.474798 12.920081 7.551784 10.155055 9.964321 11.652194 10.735158 4.331232 11.580177 12.050377 NA 10.246685 8.861499 4.099792 3.916200 10.179408 8.681224 10.878678 10.214749 NA 9.644115 14.545161 11.404226 9.811590 9.927955 1.2234000 1.2234000 0.0066653 0.0132130 0.0204830 0.0172640 -0.0073339 -0.6628100 0.6468900 0.6468900 0.6483600 -0.0070576 -0.0070576 -0.0149160 -0.0149160 -0.0149160 -0.0154660 0.0036076 -0.6564000 0.0070826 -0.0154660 -0.0570980 -0.0570980 0.5915200 -0.0633010 -0.0633010 -0.0633010 -0.0278080 -0.0522610 0.0109820 -0.0068581 -0.0120100 0.0204830 0.0243790 0.0172640 0.0061090 -0.0073339 -0.6628100 -0.6812100 0.0077783 0.0038854 0.6468900 -0.0056757 -0.0056757 -0.0056757 -0.0056757 -0.0070576 -0.0070576 -0.0149160 -0.0149160 -0.0149160 -0.0149160 -0.6777500 0.0036076 0.0036076 -0.6652700 -0.0044393 -0.0044393 -0.0154660 -0.6926600 -0.0476660 -0.0570980 -0.6605900 -0.0633010 -0.0633010 -0.0278080 -0.6321600 -0.0385780 -0.0385780 0.000 0.000 0.000 0.000 0.000 0.000 -0.656 0.000 0.000 -0.133 -0.686 0.000 0.000 0.000 -0.661 0.000 0.000 0.000 1.212 0.000 0.000 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 0.000 0.000 0.647 0.647 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.656 0.000 0.000 -0.133 -0.686 0.000 0.000 0.000 -0.661 0.000 0.000 0.000 1.212 0.000 0.000 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 0.000 0.000 0.647 0.647 0.000 0.000 0.000 0.000 8.637620 NA 6.589967 11.266608 11.578143 8.088827 11.592656 7.484922 9.140426 1.845791 10.801165 11.096313 1.523863 5.546246 3.611338 7.863728 2.983313 9.981258 11.494702 11.368191 9.569637 1.108826 7.790664 9.657020 5.430767 6.224318 0.523863 -0.476137 10.888559 6.693802 9.432270 7.723550 5.454614 10.420664 10.444230 3.224318 8.845806 NA 8.251798 12.338059 9.722323 7.406521 NA -0.476137 8.562796 1.845791 4.478072 NA 3.430767 6.959257 2.331247 9.478074 -0.476137 7.983309 9.941730 9.629786 4.950142 10.097525 11.420210 7.448690 -0.476137 2.693810 10.770618 2.845811 NA 0.523863 1.108826 12.228307 3.983313 8.865952 13.775656 9.315040 11.108370 13.008826 12.355581 9.017733 10.500442 13.566990 11.013224 9.190989 9.027703 1.108826 8.078466 11.561768 11.125648 11.829369 6.489662 13.228643 8.592656 4.881430 9.631095 8.726001 10.686930 5.546246 7.153234 8.931145 6.512562 1.523863 10.764669 3.845801 6.964498 8.920482 10.701297 10.531606 6.872606 9.370935 12.654448 2.693810 13.621148 10.613990 10.537200 10.083255 10.831078 9.846932 9.789493 10.793589 8.898917 -0.476137 8.628922 6.152068 13.748181 3.771801 10.730892 9.938563 10.825374 9.571002 7.167734 13.399051 10.121930 10.435270 12.195198 10.634361 NA -0.476137 10.622568 10.516816 9.836760 TCGA-B6-A3ZX 50 1 1152 NA breast stage iv t3 n1 m1 female 2007 NA yes mixed histology (please specify) 1 black or african american not hispanic or latino NA NA 4 3 NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.005712e-06 5.548757e-07 8.88888888888889 28.8888888888889 2.22222222222222 37.7777777777778 22.2222222222222 10.1269691 9.0333203 11.6498831 9.7867265 9.1963648 9.7261928 10.0771638 10.3967986 9.8401560 11.5135790 11.1678889 10.3336470 1.2077055 11.4477899 2.5702443 9.8150103 6.4717874 10.1286709 10.2032453 7.4877878 -1.5994621 10.7298412 8.3310625 9.9734563 10.4748012 4.5901469 -0.5996807 10.6155548 10.9570707 2.8597509 11.1113468 7.9238872 NA 5.6387313 10.4606833 10.0477836 9.7205617 10.4737973 9.7429554 11.3036422 3.4877822 7.8658916 15.0114220 9.0852666 10.8666540 11.6799357 10.2610242 5.6764508 -0.5996807 8.9150392 10.6816756 NA 10.2985486 6.2706896 8.2676037 5.1552109 9.2442461 11.8969293 9.9486654 10.8991743 12.6034437 8.1076842 10.7636386 10.7468388 10.7630909 11.2119005 5.6671115 11.0191695 9.3079669 1.4003193 10.5799233 9.4136478 4.5706511 6.7357158 11.4494930 10.9302437 11.2637371 9.1510320 2.4003193 7.8981769 12.7629539 12.2847819 10.1610451 9.4556075 0.05480300 0.05480300 -0.06772600 -0.06772600 -0.01723500 0.35920000 -0.04631200 -0.04631200 -0.03408300 -0.03408300 0.55089000 0.08074500 0.00104090 0.08132200 0.08132200 0.08132200 0.01014600 0.01014600 0.68087000 -0.14644000 -0.05253100 0.09188000 0.10162000 0.10162000 -0.09393100 -0.09393100 -0.09393100 0.00569190 0.05480300 0.05480300 -0.11269000 -0.06772600 -0.03045300 -0.27655000 -0.12584000 -0.12584000 -0.04631200 -0.04631200 -0.04631200 -0.03463100 -0.10395000 0.00097064 0.05865200 0.05865200 0.05865200 0.05865200 0.00104090 0.00104090 0.08132200 0.08132200 0.08132200 0.08132200 0.01014600 -0.06920200 -0.06920200 -0.17194000 -0.14644000 -0.25805000 -0.12784000 -0.11090000 0.09188000 0.10162000 0.08695600 -0.09393100 -0.09393100 0.00569190 0.02848100 -0.10552000 -0.10552000 0.000 0.000 0.000 0.000 0.000 0.000 -0.172 -0.146 -0.128 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.106 0.113 0.000 0.000 0.000 0.000 0.000 0.233 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.172 -0.146 -0.128 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.106 0.113 0.000 0.000 0.000 0.000 0.000 0.233 -0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.6315467 0.7222911 4.9238860 11.0223770 12.5057426 6.1120954 10.9687563 10.2560385 9.1624913 NA 12.6936531 11.8920505 5.0441799 NA 4.5296086 9.8427504 4.5901469 9.8966796 11.3557934 10.7242243 9.5614571 3.6097786 8.8648708 10.4559465 10.1779914 3.8921773 0.4003193 NA 11.1923019 5.4337473 7.6363397 8.4115525 9.9974465 11.5905187 10.5244464 5.3191880 9.2220991 3.3072099 8.9170101 12.4737973 9.6845709 7.0868252 NA 5.5296086 8.4877878 2.9852818 2.5702443 4.6291409 9.0048783 3.5296086 7.3833189 11.0419254 4.4003262 7.8658916 10.6079496 9.5708761 8.0333206 11.8479250 12.0583134 9.3072158 5.6671115 6.7578767 9.8160669 NA 8.0296820 0.7222911 6.0938116 12.918463 7.444719 8.364666 11.447790 11.057320 9.821338 7.487788 9.902162 9.248839 10.948184 13.941694 12.177169 8.915039 7.252074 4.550070 8.140106 11.214507 10.983643 11.136516 5.619492 14.243338 8.495722 9.789956 9.503613 8.201225 9.651376 10.328473 8.970181 11.167889 10.726474 8.430992 9.924867 9.648253 8.360819 11.658008 11.788342 9.236375 7.817777 10.212904 9.302700 10.177169 11.262224 9.720562 10.617071 10.895930 10.733481 11.138629 10.562402 10.744898 8.601224 NA 10.631186 7.901943 10.681676 10.779433 10.298549 5.498356 11.026566 9.244246 8.131950 13.768933 10.097727 10.416437 12.550945 11.865892 9.963045 5.338727 10.011811 8.915039 9.469775 TCGA-B6-A400 43 0 NA 215 breast stage iiia t2 n2a m0 female 2008 NA yes infiltrating ductal carcinoma 4 black or african american not hispanic or latino NA NA 4 4 NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 2.878418e-06 7.282743e-07 8.41121495327103 13.0841121495327 9.34579439252336 44.8598130841121 24.2990654205607 10.1317851 9.1295244 11.2828466 7.7396557 8.1044200 8.3403428 9.0889901 10.4832269 11.6566560 12.3636926 10.5796706 10.4211205 1.5498170 12.1335723 0.5498170 10.6391494 7.7076835 9.4852910 9.6573099 6.4373559 NA 8.4970299 8.2599489 10.0143771 10.6126870 7.4899980 2.0352720 12.3802998 11.8667916 2.8717648 8.8590803 7.6116077 -0.7720125 4.4567207 9.9382792 10.2746862 9.2037513 8.4385744 8.2066134 10.2436667 0.8128678 6.4993660 15.9048520 8.8579518 10.2990303 10.5832543 10.4245053 4.3571860 1.3978030 9.2825075 8.7016090 -1.7720125 10.2763901 4.8572595 6.3928103 6.4567224 8.1704178 11.9967078 10.1128368 12.2043778 12.1980091 7.6051135 10.9691595 10.7668051 10.9575240 10.2875856 4.0352544 12.1436892 10.9551856 0.2278643 10.7798517 9.6990704 4.4006336 4.1586440 8.9575240 10.4340018 11.2843716 9.3814551 3.3571860 7.7534240 12.8479512 11.2887680 10.3308631 10.4309453 1.66640000 0.51328000 -0.00405270 1.07260000 -0.02055300 0.57607000 0.66249000 0.02296800 0.79505000 0.79505000 1.16980000 -0.04716000 -0.03630100 0.16111000 0.16111000 0.16111000 0.46172000 -0.03575700 2.06670000 -0.02363000 -0.16895000 -0.07003600 -0.07003600 0.37080000 -0.13423000 1.68040000 -0.11760000 0.56485000 -0.48872000 -0.00059101 -0.11761000 -0.02038300 -0.50932000 0.01750700 -0.49707000 0.17207000 0.66249000 0.02296800 0.03718000 -0.02538200 -0.07511000 0.40606000 -0.05701700 -0.02579300 -0.06323200 -0.03992900 -0.03630100 -0.03630100 -0.03428900 0.16111000 -0.48324000 -0.48324000 0.46172000 -0.03575700 -0.03575700 -0.50562000 -0.02363000 -0.01026900 0.17811000 0.00458990 -0.07003600 -0.07003600 0.06877500 -0.13423000 -0.11760000 -0.16501000 -0.49791000 0.19143000 0.23283000 0.000 0.000 -0.317 -0.478 0.462 0.000 0.000 0.000 0.178 0.000 0.000 0.000 0.000 1.345 0.382 -0.134 -0.134 0.000 0.103 -0.146 -0.146 0.000 0.191 0.000 0.000 0.000 0.000 -0.489 0.000 0.000 0.000 0.458 0.458 0.000 0.000 1.170 1.170 0.000 0.000 0.557 0.000 0.000 0.000 -0.317 -0.478 0.462 0.000 0.000 0.000 0.178 0.000 0.000 0.000 0.000 1.345 0.382 -0.134 -0.134 0.000 0.103 -0.146 -0.146 0.000 0.191 0.000 0.000 0.000 0.000 -0.489 0.000 0.000 0.000 0.458 0.458 0.000 0.000 1.170 1.170 0.000 0.000 0.557 0.000 9.0456862 -1.7720125 7.7197564 11.4283421 11.7827318 5.9686967 11.2092921 9.7689854 10.6259387 -0.7720125 13.0905406 11.3404926 1.6873295 -1.7720125 5.7197557 9.0247541 3.9003258 10.3474928 11.9288847 11.6804019 8.8053321 0.2278643 8.3272508 10.1359205 6.7396564 5.1105470 1.0352720 0.8128678 10.1795522 1.8128678 6.8861148 8.8572598 5.9421485 12.0050516 10.8834339 3.3978303 9.9613423 6.3153652 7.7939570 12.3093034 9.8043876 11.5603594 NA 5.4177276 7.4782017 NA 3.6202228 0.5498170 5.0733918 3.0948103 5.3153670 11.6266469 7.9038602 8.4397914 10.7089457 9.7455727 6.5632939 9.3858816 12.5873096 8.7026233 2.9827837 5.0223190 10.0384749 3.4373609 3.7514637 3.0352544 7.7257548 13.619868 10.121584 8.035258 12.133572 10.507473 10.963248 6.437356 11.273151 9.055246 10.844682 13.959381 12.391631 9.282507 7.735698 4.782492 8.515615 10.481455 11.240179 11.369212 4.942149 13.301040 8.119687 8.473456 9.711719 8.457924 10.378606 7.504028 5.567752 10.579671 11.854183 -1.772013 10.046086 9.702623 9.341626 12.745142 10.735202 10.019066 7.737678 10.204109 6.860898 7.587653 11.120814 9.203751 10.364894 10.608094 11.262874 11.712852 10.313708 10.610527 7.596410 NA 9.006917 7.230043 8.701609 4.417731 10.276390 6.801551 11.112265 8.170418 7.979447 13.754433 9.621294 9.738173 12.266308 11.441767 3.513301 -1.772013 9.602399 9.293992 9.092863 TCGA-B6-A401 47 0 NA 2596 breast stage iia t1c n1a m0 female 2007 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 5 3 NA NA 4 4 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.201959e-07 1.387189e-07 31.5789473684211 10.5263157894737 5.26315789473684 36.8421052631579 15.7894736842105 10.12187822 8.59465715 10.14690809 7.49146913 8.84486768 8.28860034 10.05153320 10.04313723 10.74141626 13.89950421 10.95289417 10.14080051 3.81010373 13.42274596 1.45254272 10.94139452 6.39506451 7.81449403 10.04360493 12.19106471 5.34736802 12.67186997 7.05617598 10.76651301 10.68347128 6.44123447 NA 10.57083270 10.80321315 -1.54750999 7.32906707 8.01288317 0.03745251 2.45254272 9.40237684 9.45887616 9.40237684 11.13510592 9.84164375 11.15320664 10.02950686 11.44247682 14.80652399 9.20353350 9.78625901 10.92727012 10.75032621 5.44123447 3.49694802 8.17022653 10.63370247 NA 10.47457111 5.09640524 7.25021124 4.84486768 9.40529147 11.50986505 10.20868941 12.05536501 12.25789099 9.04687490 10.74515942 10.09167828 10.27671335 10.62247514 4.09640524 11.45554094 10.56986861 -0.54750999 10.67413726 9.45395827 3.99944085 5.06726010 11.40328828 9.71523240 10.76628350 8.95736908 2.70048411 9.80514539 14.22491630 12.80913970 9.82976063 9.48803653 0.84396000 0.83879000 0.18768000 0.18768000 -0.21181000 -0.00133520 -0.12499000 -0.12499000 3.65690000 0.31418000 0.57130000 -0.01033600 0.00013863 0.02272500 0.02272500 0.02272500 -0.05037000 -0.05037000 -0.21392000 0.10701000 -0.00138580 0.21253000 0.21253000 0.21253000 0.21345000 0.21345000 0.21345000 0.37101000 -0.04197400 0.00000000 -0.02027500 0.18768000 -0.21181000 -0.21181000 -0.00580180 -0.00249380 -0.12499000 -0.12499000 -0.12499000 0.41450000 0.53204000 -0.34905000 -0.28251000 -0.28251000 -0.28251000 -0.30511000 0.00013863 0.00013863 0.02272500 0.02272500 0.02272500 0.02272500 -0.05037000 -0.05037000 -0.05037000 -0.21392000 0.10701000 0.10701000 -0.00138580 0.13007000 0.21253000 0.21253000 0.15621000 0.21345000 0.21345000 0.32835000 0.14890000 -0.02794500 -0.02794500 0.000 0.000 0.000 0.000 0.000 0.000 -0.214 0.107 0.000 0.130 0.130 0.213 0.213 0.156 0.156 0.213 0.213 0.000 0.839 0.371 0.371 0.000 0.000 0.000 0.000 0.188 0.188 -0.212 -0.212 0.000 0.000 -0.125 -0.125 0.415 0.415 0.571 0.571 -0.283 -0.283 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.214 0.107 0.000 0.130 0.130 0.213 0.213 0.156 0.156 0.213 0.213 0.000 0.839 0.371 0.371 0.000 0.000 0.000 0.000 0.188 0.188 -0.212 -0.212 0.000 0.000 -0.125 -0.125 0.415 0.415 0.571 0.571 -0.283 -0.283 0.000 0.000 8.90890445 NA 6.17364916 11.55944024 11.69706269 8.49974226 11.43928107 8.47113990 9.87933390 2.03752279 12.84520301 12.08903887 4.58183327 3.87881361 4.97611155 8.46517456 3.35943683 10.58954133 10.96972740 10.80376546 8.51189454 2.54000246 8.68976006 10.13115036 6.86617854 5.68136774 4.96034489 NA 10.53536452 4.62247358 6.39506451 7.84701286 11.45677063 11.39645687 10.42660620 2.62248530 9.28227299 -0.54750999 7.72401309 12.27422453 10.15818250 8.33366434 -1.54750999 -1.54750999 8.69572419 0.03745251 3.87881361 NA 6.01479268 4.26428120 3.25990518 10.06403606 2.62248530 9.07368637 10.40274157 9.55649360 8.39359768 9.69155196 11.50086672 7.47768947 3.31052917 4.31052917 11.64761474 2.35943683 -0.54750999 2.91197913 3.20743999 12.1658798 6.7699634 8.1285074 13.4227460 9.7834670 11.2406567 12.1910647 11.4947225 9.1354043 9.8824800 12.9793550 11.0589554 8.1702265 8.8996334 0.7745024 7.1460371 11.6312150 10.6337025 12.0738008 5.9119815 13.0143136 8.7597511 6.7563308 8.9790493 8.1821709 9.3239010 7.7402624 8.7574717 10.9528942 7.2917536 1.0375228 9.9328356 8.1089750 8.0251368 10.9368696 9.9140296 10.3990910 8.0829447 9.5610746 10.4143616 6.2074380 12.5661914 9.4023768 10.1503865 10.4914691 11.1680833 10.4366125 9.4818374 9.9298025 8.1973838 4.6423723 9.6036048 6.4298302 10.6337025 7.0819063 10.4745711 7.3167359 11.0008905 9.4052915 6.6274755 13.6911788 10.0936988 10.0782590 12.8750092 11.7658584 5.0224078 0.7745024 9.4983099 9.6330810 9.1240913 TCGA-B6-A402 47 0 NA 2281 breast stage i t1c n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 1.075072e-06 4.161568e-07 34.0909090909091 22.7272727272727 0 15.9090909090909 27.2727272727273 9.6348628 8.4480163 11.2625678 8.8418558 9.1332249 8.2478967 9.9185766 10.2464454 13.2504326 12.7086462 10.7482339 10.2987227 3.7923244 12.2226571 2.6117626 9.0346612 7.2047110 9.0447149 9.5081888 1.7048720 0.2898345 5.6590597 11.2879475 9.3116493 10.8065122 5.5122206 NA 9.7451545 9.9862152 0.7048720 9.6857184 5.9809895 NA 2.7923348 7.6561495 10.0463836 8.8797903 9.2323418 9.8716555 11.4744960 2.0268001 8.2146397 14.9353543 7.7495591 10.1025394 10.2454771 10.0262292 3.7048609 1.2898345 8.7976220 8.9994854 -0.2951280 10.2176052 3.3487140 4.8747920 4.4862252 10.1211345 11.7372549 11.5517263 11.1038756 12.6170992 8.0335397 11.0080747 10.6282814 11.5234469 11.8399327 4.0130245 12.0744621 11.6291206 -1.2951280 9.7020442 9.6311607 4.2904318 2.9527995 8.3541211 9.7923276 10.9228225 10.7031026 3.2284339 6.7327712 12.4051961 11.4423234 9.6132574 9.8885002 1.588500 1.607000 -0.096274 0.071391 -0.514550 0.074265 0.344370 0.398860 -0.704940 0.263410 2.564000 0.585440 -0.374590 -0.603610 -0.130120 -0.130120 0.113050 -0.214780 -0.055634 0.381970 -0.122000 -0.403620 0.182070 0.795290 3.656900 1.097500 -0.353390 1.151600 0.213300 0.311770 0.119340 -0.096366 -0.321820 -0.547740 -0.653420 -0.653420 0.344370 0.411280 0.407270 -0.640290 0.424350 -0.728700 -0.093667 -0.093667 -0.433870 -0.433870 -0.374590 -0.405180 -0.603610 -0.130120 -0.122260 -0.122260 0.113050 -0.214780 -0.214780 -0.055634 0.109060 0.308090 -0.135020 -0.228590 -0.403620 0.182070 -0.368950 -0.432570 -0.863500 0.402770 1.156400 0.379240 0.379240 0.506 -0.375 -0.604 -0.604 0.113 -0.102 0.000 0.000 -0.135 -0.133 -0.133 -0.147 0.257 -0.369 -0.369 -0.353 -0.353 -0.380 1.607 0.441 0.441 1.156 0.379 0.163 0.163 0.000 0.000 -0.257 0.000 -0.653 -0.653 0.399 0.399 -0.216 0.424 0.626 1.302 0.000 -0.340 0.000 0.000 0.506 -0.375 -0.604 -0.604 0.113 -0.102 0.000 0.000 -0.135 -0.133 -0.133 -0.147 0.257 -0.369 -0.369 -0.353 -0.353 -0.380 1.607 0.441 0.441 1.156 0.379 0.163 0.163 0.000 0.000 -0.257 0.000 -0.653 -0.653 0.399 0.399 -0.216 0.424 0.626 1.302 0.000 -0.340 0.000 0.000 8.5345873 NA 7.6648668 11.0449930 11.9115739 7.8597336 12.0053603 6.6082045 8.0478061 NA 12.9675469 11.0247598 5.1142546 NA 4.8341499 8.9384843 2.7048720 9.1906941 11.3312582 11.2740083 8.8959239 NA 8.4463319 10.0408133 4.4053049 2.1643036 -1.2951280 -1.2951280 10.0369012 -1.2951280 5.1311285 7.9216107 8.0928819 10.4314406 11.0197312 -0.2951280 9.4199688 0.2898345 6.7655613 13.0477728 10.1982198 7.8722827 1.0268001 4.1311285 9.4689071 5.0086437 1.2898345 0.7048720 2.6117626 2.8747970 1.2898345 11.2445083 9.2546493 9.5989246 11.2811129 10.0086454 2.7923348 7.2747201 11.4276723 6.1227183 4.0267912 1.7048720 9.5519220 2.8747970 7.7682598 2.7923348 7.2556112 13.328885 7.862211 7.713294 12.222657 9.747235 11.628007 1.704872 11.305939 8.842983 10.092882 13.814614 12.666767 8.797622 8.949229 4.813391 8.245961 11.215876 9.942672 11.927358 5.079903 13.756241 8.178571 7.114256 9.413086 9.313120 9.636415 4.164296 3.228434 10.748234 5.813389 NA 10.571757 9.607240 9.017010 12.113194 9.004073 11.088569 8.542493 8.844416 5.813389 4.682146 10.752445 8.879790 10.501716 10.249829 13.108143 11.987374 11.076641 10.151948 8.099327 NA 9.324755 6.035782 8.999485 4.537756 10.217605 7.058011 10.393884 10.121134 8.236246 13.943046 10.966666 10.596648 12.186412 11.421256 -0.295128 NA 10.856198 10.352773 9.277565 TCGA-B6-A408 55 0 NA 2072 breast stage iiic t2 n3a m0 female 2008 NA yes mixed histology (please specify) 10 black or african american not hispanic or latino NA NA 1 1 NA NA 4 2 3 5 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 4.161568e-07 20.5882352941176 23.5294117647059 5.88235294117647 14.7058823529412 35.2941176470588 10.31508048 9.46652741 11.89898332 8.46437993 8.81383729 9.18723650 11.10806420 9.21560143 10.25008318 12.46276727 12.08518764 10.27602644 6.39542274 12.96071508 3.34651728 10.03011257 5.74592033 8.55462108 6.68820414 12.85225608 3.48852786 14.32030927 6.91479650 9.73730160 10.59149187 7.11424103 1.29589931 10.28619352 10.99136375 2.94796532 8.90954482 6.63827951 0.81048423 5.46581125 9.93251153 9.70830555 8.81944881 10.70163621 9.48076213 11.15186769 1.07347751 11.64160893 14.51702082 8.23539870 10.82531746 10.46330499 10.37193898 4.29588462 1.07347751 8.29427566 10.05315778 0.07354606 10.36619958 5.46581125 6.90216043 5.51089864 8.96020731 11.74104958 10.80707481 10.47295042 12.47197096 7.88727546 10.56601531 10.80035118 10.73705260 11.14495682 5.07349465 13.26424511 11.98176198 0.48851501 10.85074974 8.97637194 5.24475389 5.94796299 10.26660912 8.80594471 10.58161939 9.31189927 8.26002142 6.64840360 12.11229917 11.22451099 9.89845326 10.19113758 0.22905 0.27505 0.27143 0.26279 -0.14541 0.29565 0.28074 -0.15945 3.65690 2.41040 0.61498 -0.13820 -0.13820 0.27583 0.27583 0.27082 0.34534 3.65690 -0.98264 0.26467 -0.13225 -0.53642 -0.12004 -0.12004 -0.10880 -0.10880 -0.10880 0.31113 0.24747 0.22905 -0.13070 0.27111 -0.14541 0.27553 0.29565 0.29565 0.28074 -0.15579 -0.11796 -0.13393 -0.13393 -0.98815 -0.97693 -0.96767 -0.13225 -0.13225 -0.13820 -0.11273 -0.55547 0.27583 0.27082 0.31691 0.28305 -0.55436 -0.54118 -0.96078 0.26467 0.26467 0.30234 -0.55216 -0.53642 -0.12004 0.28723 -0.10880 -0.10880 0.31113 -0.12291 -0.57015 -0.54927 -0.138 -0.138 0.271 0.271 0.283 0.283 -0.983 0.265 -0.132 0.315 -0.237 -0.536 -0.536 0.287 0.287 -0.109 -0.109 0.229 0.229 0.311 0.311 -0.123 -0.525 -0.131 -0.131 0.271 0.271 -0.145 -0.145 0.296 0.296 0.125 -0.156 -0.134 -0.134 -0.988 -0.384 -0.938 -0.938 0.000 0.000 -0.138 -0.138 0.271 0.271 0.283 0.283 -0.983 0.265 -0.132 0.315 -0.237 -0.536 -0.536 0.287 0.287 -0.109 -0.109 0.229 0.229 0.311 0.311 -0.123 -0.525 -0.131 -0.131 0.271 0.271 -0.145 -0.145 0.296 0.296 0.125 -0.156 -0.134 -0.134 -0.988 -0.384 -0.938 -0.938 0.000 0.000 8.71253353 0.07354606 5.13238765 11.22704651 11.08658449 8.66429367 11.82991178 8.16859240 9.12825241 0.81048423 12.12855089 11.67728153 4.82838278 3.98038182 4.63827661 7.47437358 4.24341775 11.75736634 11.14897362 10.74119738 9.16889145 4.39541932 8.30391542 10.31865104 7.48571180 4.59705437 1.29589931 -1.51127935 10.92185655 6.85047566 6.33402115 8.02769096 6.91479650 11.80377494 10.02429336 3.48852786 9.26331897 NA 7.20277718 11.76973757 10.00816821 8.34340027 NA 0.07354606 8.12515668 3.77393305 3.84608206 0.07354606 6.18201886 5.07514752 3.44273122 10.31666846 -0.51148499 7.17152611 10.96249133 8.98338755 6.05838794 10.29306637 13.39842505 8.51367154 4.18897055 4.86357178 11.17174594 1.29589931 1.48851501 NA 4.32142306 14.458046 4.160961 8.243420 12.960715 9.164489 10.306315 12.852256 11.825736 9.210955 10.701940 12.765311 9.572676 8.294276 7.992358 1.295899 6.927324 11.097942 10.8743944 12.9088870 5.1178903 13.4364866 9.0002846 6.8239226 8.8947368 7.9105966 10.6528984 8.0621789 8.2974959 12.0851876 7.6955464 0.8104842 11.6744914 6.7125339 8.4530751 9.9973171 10.7605785 10.6946306 9.3174617 9.1609572 10.4196387 8.4643799 12.0692169 8.8194488 11.2870038 10.6693735 11.2432107 10.3806953 10.0777149 10.1436154 8.3198392 NA 9.7607943 6.9021604 10.0531578 9.0659608 10.3661996 6.9273240 11.0305965 8.9602073 7.4014214 13.9465220 10.5816194 10.4133444 12.2719395 10.9497556 4.1889705 -0.5114850 10.0037390 9.9893738 9.5700154 TCGA-B6-A409 44 1 573 NA breast stage iiia t1c n2a m0 female 2008 NA no infiltrating ductal carcinoma 6 black or african american not hispanic or latino NA NA 4 4 NA NA 5 5 2 7 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6.589149e-07 3.81477e-07 16.1290322580645 25.8064516129032 0 35.4838709677419 22.5806451612903 8.26580302 8.16871373 10.53645569 6.40222248 8.52186579 7.97993501 6.58534416 11.23587344 12.88954870 13.22048022 10.13769576 10.12419525 0.34698525 12.15931786 2.51687244 11.08037906 7.15751166 8.43307629 8.35256434 7.28357828 -0.06809006 9.72197941 9.38859920 9.99180115 10.01848104 6.79815163 -0.06809006 10.88997183 11.71353542 0.34698525 9.71762742 7.08164960 NA 3.77320516 8.70339179 9.08756414 9.31776488 9.52124159 9.05429906 10.63465234 2.51687244 8.75633081 14.77778452 5.74414495 9.96486658 9.82773012 9.21499076 3.66886797 0.93190994 8.02465988 9.75420774 -0.65312819 10.01803865 4.49668604 4.22958023 6.25982987 9.14945627 11.53351853 10.58922090 10.53738198 11.71980505 9.23568327 10.51435812 10.05989682 10.37864123 9.86608470 2.80636531 10.75924515 9.94499252 2.93190994 10.71844443 9.48840856 5.91223309 3.63233802 8.87050189 9.10349633 10.12131528 9.76003893 2.04736389 7.36374843 12.33455928 12.27758492 9.24554130 9.45088338 1.169600 1.672300 -0.262150 -0.273670 0.287390 0.593770 0.443760 0.386510 -0.376890 0.220680 1.881700 0.625330 -0.254410 -0.259740 0.089416 0.089416 -0.313300 -0.273390 -0.280610 -0.259390 -0.249950 -0.205710 -0.205710 -0.225680 -0.170180 -0.212930 -0.211190 1.806100 -0.291890 0.216680 -0.030243 -0.262150 -0.272120 0.284690 -0.272300 -0.272300 0.443760 0.339650 -0.279770 -0.080141 0.347300 -0.376890 0.078693 0.078693 0.078693 -0.496730 -0.254410 -0.254410 -0.259740 0.089416 0.089416 0.089416 -0.313300 -0.273390 -0.228590 -0.265160 -0.259390 -0.259850 -0.265300 0.569700 -0.101450 -0.205710 -0.343730 -0.170180 -0.212930 0.240470 0.270640 -0.132510 -0.134320 0.617 0.363 -0.260 -0.260 -0.273 -0.273 -0.281 -0.259 -0.265 0.000 0.524 -0.206 -0.206 -0.338 -0.338 -0.213 -0.213 0.774 0.774 0.240 0.240 0.271 -0.133 0.218 0.000 -0.262 -0.262 -0.027 0.236 0.594 0.413 0.444 0.340 0.000 0.347 -0.156 0.221 -0.497 -0.497 0.000 0.000 0.617 0.363 -0.260 -0.260 -0.273 -0.273 -0.281 -0.259 -0.265 0.000 0.524 -0.206 -0.206 -0.338 -0.338 -0.213 -0.213 0.774 0.774 0.240 0.240 0.271 -0.133 0.218 0.000 -0.262 -0.262 -0.027 0.236 0.594 0.413 0.444 0.340 0.000 0.347 -0.156 0.221 -0.497 -0.497 0.000 0.000 8.64614789 1.15432396 6.08840665 11.75021837 11.46555666 7.78413030 11.19164574 6.75420741 8.22592559 2.73926486 13.45701541 12.85722264 2.51687244 NA 2.80636531 8.51310302 3.66886797 9.69345368 10.84603841 10.43639049 9.50618061 3.30113399 8.52684896 10.50017534 6.28357735 5.53676474 4.51686614 NA 10.06247308 3.04738134 4.72197958 8.08840718 10.60137813 10.27014112 10.29311524 2.80636531 9.42908908 NA 7.08840665 12.43771403 7.24175821 8.35676843 NA 1.80636531 9.32135451 3.47622613 2.80636531 -0.06809006 4.47622613 2.73926486 4.32422016 12.02024907 8.31704579 10.41437436 11.45954238 10.11015232 4.17982949 9.40628453 11.06225855 7.75208154 1.93190994 4.30113399 9.73603352 -0.65312819 7.77530015 1.34692853 8.21576255 12.165806 7.613727 8.868540 12.159318 9.104330 12.224799 7.283578 10.105996 8.623064 9.191646 13.159719 11.747819 8.024660 9.062902 4.455465 6.965326 11.317765 9.758451 12.033441 4.870503 14.280030 9.224991 5.695668 9.060327 7.521866 9.109646 6.223457 6.700087 10.137696 6.760568 3.346943 9.632920 9.319920 9.590227 12.590412 9.383800 10.195563 7.730644 9.740330 4.369306 5.506811 9.833006 9.317765 10.251575 10.467178 10.532125 12.628363 11.013830 9.439697 7.481366 NA 9.859508 6.265803 9.754208 5.668868 10.018039 4.074856 9.256083 9.149456 8.025117 14.493608 10.345883 10.310197 11.698155 11.942780 1.931910 -1.652901 9.993049 9.163124 8.218845 TCGA-B6-A40B 76 0 NA 3152 breast stage i t1b n0 (i-) m0 female 2005 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 2 NA NA 4 2 4 5 3 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 3.81477e-07 18 34 2 34 12 9.3130288 8.7811426 10.6528431 7.4774604 8.4003210 8.5333465 9.9408894 9.4513238 11.1030709 9.2918285 12.0557162 10.0101153 6.6868437 13.5725969 2.2628240 10.3513407 7.7024408 8.0701725 9.8612422 13.1212648 2.6778465 13.9629970 6.5408022 10.1566528 10.5955254 8.2170135 0.3559184 11.0329219 10.7514610 0.3559184 7.7266140 6.1888163 NA 3.5258559 9.5401823 10.4549458 10.1103968 10.6308873 9.3072115 10.5220899 1.9408809 10.6929912 14.6796677 6.7641723 10.0931742 10.3431908 9.9618693 4.2385729 2.2628240 7.3559272 10.2158498 -0.6440816 10.4159472 4.0838431 5.0563668 4.2139071 9.7079702 11.5272600 10.7057609 12.2897097 12.1547024 8.5308526 10.5414218 10.3123321 10.4483537 9.6924335 3.4433945 11.2646948 11.5887974 -0.6440816 10.5549856 8.3144795 4.8638790 4.1888203 11.2868489 9.6150817 10.1907929 8.5907442 1.9408809 10.1199690 13.6041509 13.2082125 9.7905551 9.5763052 0.6511200 0.6511200 -0.0417020 -0.0538810 -0.1431600 0.4277200 0.0723960 0.0655290 0.0744080 0.0744080 0.0744080 0.0725400 0.1028400 0.0793540 2.8256000 0.7088900 0.0716780 0.0666900 -0.0506410 0.0801680 0.0988510 -0.0019399 -0.0019399 -0.0111980 0.0995790 0.0995790 0.0995790 0.1006000 -0.4986000 -0.5317100 -0.0518950 -0.0417020 -0.0964400 -0.1431600 0.4277200 0.4277200 0.0801680 0.0744080 0.0655290 -0.0422450 -0.0422450 0.0744080 -0.0353120 -0.0353120 -0.0353120 -0.0353120 0.0884030 0.0884030 0.0873900 -0.5140400 -0.5360200 -0.5360200 0.0716780 0.0666900 0.1010300 -0.0671900 0.0801680 0.0886920 0.0988510 -0.5185600 -0.0019399 -0.0019399 -0.0384720 0.0995790 0.0995790 0.1006000 0.0698120 -0.5048200 -0.4967300 0.000 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 0.000 0.120 -0.398 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 0.119 0.101 0.101 0.000 -0.505 0.000 0.000 0.000 0.000 -0.124 -0.124 0.428 0.428 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 -0.514 0.000 0.000 0.000 0.000 0.000 0.120 -0.398 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 0.119 0.101 0.101 0.000 -0.505 0.000 0.000 0.000 0.000 -0.124 -0.124 0.428 0.428 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.22397779 2.67784647 6.89120165 11.56979050 11.43023561 8.26536985 12.30438535 7.80075562 9.39630572 2.26282400 13.42969187 10.69689235 3.52585590 2.44339447 3.16328940 7.92957384 2.81534999 9.33463732 10.52020526 10.61154560 9.26356874 7.19827707 7.62739015 10.45231260 5.63205005 5.89508446 4.44338784 NA 10.93524278 6.70022330 6.41120928 7.99255149 5.15034439 11.43824221 10.20415857 1.16330550 9.73205224 -0.05904398 6.03540617 11.79718520 9.88340378 8.76319477 NA 2.74824653 8.24467018 2.26282400 3.35593246 NA 3.16328940 5.43605187 1.67784647 10.79938848 -0.05904398 5.66880842 10.71540187 9.79159710 4.18882025 9.53459178 10.56994236 7.33320635 2.94088087 4.52584964 10.53863157 3.26282400 NA 1.94088087 2.26282400 13.395537 5.632050 8.147090 13.572597 9.932817 11.026804 13.121265 10.018150 9.478755 9.768497 14.176505 12.827539 7.355927 9.818429 1.163306 6.765317 11.095497 11.4193219 12.9295740 6.7309660 13.0807066 8.7428672 5.4112093 9.0546314 7.9352429 10.3923959 6.3838321 5.1761073 12.0557162 7.2507447 2.6038578 11.2658200 6.7482438 7.1980570 9.6127251 10.3374941 10.8298862 7.1340042 9.8462764 9.3789882 5.7821910 12.4045840 10.1103968 10.8283638 9.3231532 11.1878279 10.0092198 9.5531435 10.0740316 6.9219813 NA 9.2035793 7.8434858 10.2158498 6.3893500 10.4159472 7.3303415 10.7666432 9.7079702 6.5157976 13.3692059 9.6733395 9.6834794 12.9507180 11.2708725 0.3559184 1.1299424 9.0459248 9.4260477 9.0999198 TCGA-B6-A40C 51 0 NA 2164 breast stage iib t3 n0 (i-) m0 female 2005 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 2 NA NA 4 4 4 3 3 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 3.467973e-07 26.4705882352941 29.4117647058824 2.94117647058824 29.4117647058824 11.7647058823529 9.9119454 9.2276966 11.0688914 8.2802112 8.4369180 9.0456712 10.8297249 9.2164282 11.0533286 11.3237948 8.4896300 9.8962458 -1.8656476 13.1816587 2.6578458 10.2506230 5.8416386 8.7173618 8.9049428 12.2377308 1.3042190 14.6042229 5.7341921 10.4916111 10.0602044 7.1342795 -0.2806851 11.4658497 9.5741100 2.8891620 9.0598336 6.0650165 -1.8656476 3.8067056 9.3684977 10.2160954 9.4796843 10.6761017 9.1773064 10.5410156 8.8347188 10.3910775 15.1083015 8.3989211 10.3783456 10.9466570 10.2074164 5.1229626 6.9608279 8.1621849 10.6400906 -1.8656476 10.4508435 6.4104039 6.1895617 4.6578400 10.2000317 11.5764451 10.8332007 11.4792685 12.3669998 8.8433630 10.6087456 10.4905384 10.4934796 10.9693426 4.5265947 10.8491685 11.4458855 -0.8656476 10.4609895 9.1286326 5.0456133 5.2532216 11.1971685 9.8493830 10.5761858 9.4225684 4.8485228 7.7154795 12.2986361 11.5997179 9.9160486 9.8630500 1.39070000 1.40360000 -0.00266070 -0.01948000 -0.00473630 -0.00598060 0.66619000 -0.71339000 -0.01122600 -0.66191000 0.64649000 0.01611700 0.01611700 0.00191320 0.00191320 0.00191320 -0.01005800 -0.01005800 0.00844570 0.01151100 -0.66635000 0.02690600 0.02690600 0.02690600 0.06850600 0.07956200 0.07956200 0.02480000 0.05093200 0.00011013 0.01849400 -0.00266070 -0.00473630 0.01444100 -0.00598060 -0.00598060 0.66619000 -0.71339000 -0.71339000 0.05662600 0.04638800 -0.69389000 0.00621950 0.00621950 0.00621950 0.00621950 0.01611700 0.02255600 0.00000000 0.00191320 0.00191320 0.00191320 -0.01005800 0.00274600 0.00274600 -0.00874300 0.01151100 0.01975400 -0.66635000 -0.66931000 0.02690600 0.02690600 0.02143400 0.06850600 0.07956200 0.02480000 0.01304500 -0.65558000 -0.65849000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.177 -0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.366 0.000 0.000 0.000 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.653 -0.698 0.000 0.000 -0.694 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.177 -0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.366 0.000 0.000 0.000 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.653 -0.698 0.000 0.000 -0.694 0.000 0.000 0.000 0.000 0.000 7.7434577 1.3042190 5.6499775 11.6865880 11.3211671 8.1979302 11.5825245 8.3396812 9.4996885 -0.8656476 11.2659753 11.5358933 7.3630975 3.0411729 4.2840255 8.2177585 5.6499775 10.1377971 10.9376030 10.8889579 9.2998143 5.2840255 8.2070817 10.0142452 6.7709043 8.1144186 -0.8656476 NA 10.5212193 4.9416322 6.0411707 8.1621849 5.3437311 11.4342126 10.6301341 2.3041898 9.9012220 NA 7.6539156 11.8254773 10.2741502 8.0709168 -0.2806851 2.1342867 8.6955669 -1.8656476 5.1342784 NA 5.0531418 4.0652535 2.3821969 11.0640923 -0.8656476 6.5772219 11.3222497 9.5683860 6.7924910 9.4477290 11.5394206 7.9875886 3.3822107 4.1566474 10.1158463 3.5265947 NA 1.3042190 2.9416322 11.143333 5.979769 8.379832 13.181659 10.016735 11.030801 12.237731 10.463515 8.924416 10.063907 13.028434 11.135863 8.162185 8.050158 2.834711 7.591660 10.168390 11.2757476 12.1533485 7.5244477 13.7250992 8.7853308 5.6656600 9.1335746 8.8908355 10.5345208 7.7889154 6.5937108 8.4896300 7.0441722 -0.2806851 10.7489890 5.8757457 7.6708956 10.1325170 9.7695438 10.2706294 7.9221818 10.0260628 9.3570740 6.3241031 10.9534284 9.4796843 10.5665600 10.6919821 10.6573510 11.1293396 10.3357904 10.6208628 8.1868472 NA 9.7492282 6.4741294 10.6400906 6.3630975 10.4508435 7.3869446 11.2640451 10.2000317 7.5438400 13.9720302 10.1545646 10.2969851 12.3552619 11.4609895 1.1342867 -0.8656476 9.7622689 9.4511262 10.2286867 TCGA-BH-A0AU 45 0 NA 1914 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 1 1 4 3 1 1 1 6 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 2.080784e-07 16.6666666666667 22.2222222222222 0 38.8888888888889 22.2222222222222 10.1779097 9.7513991 12.3503927 9.9113866 8.3478973 8.8336093 10.4242687 9.8583682 9.3989367 13.6229641 11.0742333 10.5637091 1.8520388 13.3260015 3.0999684 8.3458975 7.4850371 8.8250220 8.0443351 12.4785497 1.1739589 13.4285265 4.2443619 9.3001585 11.8592446 8.0736291 -0.1480012 8.9208203 7.8378840 3.3114741 7.8576669 7.1328133 NA 4.4066319 10.1941167 10.8385952 10.7619352 9.9566409 9.8909611 11.7164217 2.9395087 10.9001884 14.7229847 9.3877938 10.1472371 12.3804962 12.1446513 5.7346852 5.7100239 9.6553660 10.5044390 NA 11.4947707 6.1374441 6.4740937 5.3912006 10.3608272 11.6196059 11.3254942 12.3221925 12.7253901 9.1694548 11.1663421 10.3247330 11.4660617 11.3677420 5.3438946 12.1779097 12.0017892 NA 10.5926661 9.1141369 3.4423995 4.7100239 10.0999696 10.3408865 10.6448324 11.3573575 2.1739589 9.9683861 12.6991974 11.3158219 10.6845366 9.0467991 0.539420 0.539420 0.267340 0.249650 0.256210 0.418980 -0.377970 -0.377970 0.481310 -0.159110 0.735680 -0.381230 0.208700 0.257150 0.257150 -0.376170 0.252150 0.252150 -0.046312 -0.364080 0.214530 0.264980 0.264980 0.264980 0.242640 0.242640 0.242640 0.875470 -0.070888 -0.045544 -0.063435 -0.385600 0.256210 0.246400 -0.370080 -0.370080 -0.377970 -0.377970 -0.377970 0.256210 0.236010 0.481310 -0.377970 -0.377970 -0.377970 -0.377970 0.208700 0.208700 0.257150 0.257150 -0.376170 -0.396260 0.252150 0.252150 0.252150 -0.046312 -0.364080 -0.384030 -0.369400 -0.767260 0.264980 0.264980 -0.047124 -0.409920 0.242640 0.266710 -0.347900 -0.422870 0.256210 -0.381 -0.173 0.257 -0.119 0.252 0.252 0.000 -0.364 -0.369 0.271 -0.093 0.265 0.265 0.000 0.000 0.243 0.243 0.000 0.539 0.267 0.267 -0.348 -0.359 0.000 0.000 0.250 0.250 0.256 0.256 0.419 0.049 -0.378 -0.378 0.236 0.236 0.808 0.808 -0.378 -0.378 0.000 0.000 -0.381 -0.173 0.257 -0.119 0.252 0.252 0.000 -0.364 -0.369 0.271 -0.093 0.265 0.265 0.000 0.000 0.243 0.243 0.000 0.539 0.267 0.267 -0.348 -0.359 0.000 0.000 0.250 0.250 0.256 0.256 0.419 0.049 -0.378 -0.378 0.236 0.236 0.808 0.808 -0.378 -0.378 0.000 0.000 8.2783068 NA 5.4958998 10.7536633 12.0790563 6.9199609 11.2115172 8.9855696 8.7631194 1.6593766 11.0257192 12.3574319 3.6069278 4.7100239 3.8520388 9.1615184 4.5244649 10.5363524 11.9508967 10.9703344 9.1199991 1.4370146 8.1558231 10.4676718 6.9709836 6.0712113 0.8520788 NA 10.6383117 6.6135935 6.8909610 9.4027889 7.8378840 10.6005453 10.6916396 3.4370013 8.8336093 3.0219594 7.4886668 11.8378840 8.1188285 5.8062390 NA 5.8178253 8.7053518 2.7589427 3.9395087 3.2443543 6.2443600 6.2188896 3.0219594 10.8615209 -1.1478413 7.8062383 9.6177426 10.0669683 4.8520438 9.3247330 13.7184034 8.7006651 4.4066319 3.7100184 10.1750969 0.4370146 NA 2.3114741 2.7589427 14.074168 7.041867 9.481399 13.326001 9.944443 10.938510 12.478550 12.977859 8.719321 11.175941 13.184428 10.512038 9.655366 8.233585 2.173959 7.402789 11.692820 11.079959 11.629297 7.764931 13.004084 8.284584 6.716228 8.928858 9.531522 9.632803 6.659397 5.041865 11.074233 6.235746 5.939504 10.196338 5.311474 7.225952 11.129911 9.881329 10.505335 9.974223 9.456595 12.474208 6.991593 12.864456 10.761935 10.138022 10.824304 10.921156 9.367742 10.525351 10.521813 9.094025 2.552475 8.752864 7.089108 10.504439 7.031951 11.494771 8.272002 10.166059 10.360827 7.367742 12.581663 10.091641 9.840727 12.947934 10.144364 3.099968 NA 10.240598 10.082663 9.341890 TCGA-BH-A0AV 52 0 NA 1820 breast stage i t1c n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 black or african american NA 2 3 4 NA 5 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456549e-06 4.855162e-07 6.89655172413793 25.8620689655172 6.89655172413793 36.2068965517241 24.1379310344828 9.6765469 9.7197025 11.7714773 9.9124912 8.9255022 9.1286947 8.0218461 10.1569752 11.4424645 12.5287801 11.5985525 10.3238797 2.1260808 11.7840327 3.0695131 11.7217121 5.7017819 8.2281727 11.0087390 6.1872075 NA 6.1399012 9.2632842 9.3452644 11.3499120 5.7202757 -1.5743259 8.4887950 10.8683406 3.3798566 7.9840772 8.3696362 2.8850862 6.0550134 9.3332980 10.6033872 9.4910724 9.3740235 10.6789129 10.5273037 -1.5743259 7.3856580 15.7326435 8.6487530 9.8044929 10.8958067 11.0325241 4.5131180 NA 9.5523607 10.2797454 -0.5743259 11.2958283 7.5131188 6.6640604 5.6448254 8.8602844 11.9200118 9.7854059 12.9133707 12.9636632 7.9054363 11.5750859 11.3807140 11.6924428 11.3424687 5.3798531 11.5510697 10.0185803 -1.5743259 10.6715060 10.2526019 2.7533478 5.3914412 11.9743578 10.6944907 10.6499595 10.3925221 4.1805457 5.9648145 13.0493092 12.2887778 10.3117338 10.0918803 1.6943000 0.4971800 0.1580100 -0.4589600 -0.5071200 1.3088000 1.1744000 0.2477800 -0.4915200 -0.4915200 0.3952900 0.0788710 -0.4640800 -0.4822900 0.1647500 0.4243500 0.9750200 -0.4884800 0.1713600 -0.0062286 0.6862600 -0.4430700 -0.4430700 0.0784380 -0.4336600 0.0406090 0.0715350 -0.4901600 -0.4740600 0.0362290 -0.4692900 0.1659300 -0.0069195 -0.5306300 -0.5153200 -0.5153200 0.5480600 0.2477800 -0.0084385 0.7124600 -0.4928700 -1.2208000 0.4775300 0.0022193 0.0022193 0.0434400 -0.4640800 -0.1773000 -0.4822900 -0.4703500 -0.4970500 -0.4970500 1.0038000 -0.4884800 -0.4884800 -0.4969500 -0.4404800 -0.4669600 -0.5187700 0.8354900 -0.4849200 -0.4430700 -0.0478010 -0.4336600 -0.4377800 -0.4780200 0.3800600 0.0343950 0.0214630 0.000 -0.124 -0.482 0.000 0.364 -0.488 -0.501 -0.459 0.000 0.125 -0.352 -0.443 -0.443 -0.458 0.000 -0.434 0.000 0.000 0.000 -0.478 -0.478 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 -0.485 0.104 -0.515 0.548 0.248 0.000 0.000 -0.093 0.398 0.000 0.000 -0.611 0.000 0.000 -0.124 -0.482 0.000 0.364 -0.488 -0.501 -0.459 0.000 0.125 -0.352 -0.443 -0.443 -0.458 0.000 -0.434 0.000 0.000 0.000 -0.478 -0.478 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 -0.485 0.104 -0.515 0.548 0.248 0.000 0.000 -0.093 0.398 0.000 0.000 -0.611 0.000 7.90138946 4.15357838 6.38565881 9.89529808 11.70773110 6.16678573 10.21315077 11.58949929 7.12210219 NA 11.70163521 11.14180476 -0.57432586 NA 4.28364032 9.16712330 3.23301371 9.37256256 11.12804538 11.77452271 8.98980575 2.01063664 8.19879567 10.51643026 6.14675500 5.36817118 0.42567414 1.01063664 10.84271757 7.08386754 8.19052795 7.99930328 6.82653578 9.30213486 11.51824822 0.01063664 9.69886907 5.45908074 8.10513642 13.51618222 7.41434106 7.51841318 NA 4.06951314 7.04770851 -1.57432586 3.94921741 -1.57432586 3.47005524 3.92773530 8.29756149 11.04197537 3.06951314 10.93913716 11.27994029 9.81689981 5.32047385 9.50980034 11.68407506 9.06770781 1.59559914 4.15357838 10.76020889 4.91750814 3.23301371 -1.57432586 5.01061873 11.271577 7.781008 7.854016 11.784033 10.174268 10.924256 6.187208 12.772031 10.044501 12.433297 14.223571 11.090326 9.552361 8.400071 1.010637 9.424952 10.781833 11.61918161 11.26643420 4.35639034 14.53634243 9.48025381 8.78210808 8.44802418 5.88508867 10.51764695 5.47005198 3.71105432 11.59855247 10.08698898 0.74760223 10.38275824 8.26012730 9.56755895 13.82393232 10.73171792 10.61918161 7.90341432 7.95508667 10.10821197 5.60556545 9.13484341 9.49107243 9.90745569 9.14931729 12.26397382 11.50813798 11.87892688 11.09830256 9.56072412 NA 9.46433520 8.95508667 10.27974544 6.16036560 11.29582827 9.37110011 10.37402343 8.86028436 7.68068513 14.32539079 9.86392823 10.17217058 13.07939703 10.45321671 0.01063664 0.01063664 10.51212425 10.35232289 9.76439260 TCGA-BH-A0AW 56 0 NA 622 breast stage iia t1c n1a m0 female 2008 NA yes infiltrating ductal carcinoma 2 white NA 3 2 4 2 NA NA 2 6 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.259895e-06 1.24847e-06 13.6363636363636 44.6969696969697 4.54545454545455 25.7575757575758 11.3636363636364 9.7294447 9.4513278 11.4559854 8.4824789 9.5720883 9.4836197 9.4278115 10.7284826 10.1609785 13.9469857 9.2420930 10.5334983 0.7636665 16.9531183 3.0855946 8.7878768 5.2010653 8.1758773 6.0975602 11.9298235 NA 11.8888586 2.9860468 9.4728133 10.1744651 6.7786107 1.7636665 10.5040034 11.7267974 1.1786828 8.5902090 7.5450201 2.8791372 6.3385688 8.9302421 10.1878267 9.3881514 9.6775472 10.0697222 10.5774417 15.0135887 10.0327871 14.6718654 6.7335943 10.1566933 10.4836196 9.6154095 4.6381318 7.2819856 8.7275199 10.8821690 0.1787465 10.8700053 6.3881516 7.7409404 6.1559779 10.1502416 11.8509023 9.9032118 10.8112388 12.5787769 6.6625132 10.6039138 9.0647907 10.8581780 10.7966245 3.5710214 11.5323962 9.7664754 1.7636665 10.1072163 8.8581781 0.7636665 6.3486237 10.7837144 9.8216522 10.3124824 9.5667153 2.9860468 9.0413353 12.3688313 11.9258419 9.3746852 9.8938019 0.8467200 0.8467200 -0.0053992 0.3393400 2.0957000 0.3499000 0.3438800 0.7894800 -0.0049844 -0.0049844 0.6952100 0.2100800 0.0088920 -0.0114730 -0.0114730 -0.0114730 -0.0096806 -0.0096806 0.0000000 -0.1216100 -0.0140900 1.1516000 3.6569000 1.0806000 -0.0393940 0.2839000 0.2381400 0.9403700 0.1280000 0.1622000 -0.4065000 -0.0053992 -0.4074900 0.2449800 -0.0258010 -0.0258010 -0.0250720 -0.0538810 1.0270000 0.7750200 -0.0139530 -0.0049844 -0.3866000 -0.3711000 0.0000000 0.0000000 -0.3889500 -0.4580900 -0.1021100 -0.0114730 -0.0041546 -0.0041546 -0.0096806 -0.0073339 -0.0085766 -0.3563500 -0.1216100 -0.1216100 0.0146090 -0.3682700 -0.3833600 -0.7359100 0.7296200 -0.0393940 0.2381400 0.7122700 -0.0200010 0.0034687 0.0213230 0.210 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.000 0.317 0.000 0.033 0.417 0.000 0.000 0.284 0.284 0.162 0.847 0.712 0.335 0.000 0.000 0.317 0.000 0.000 0.000 -0.343 -0.343 0.350 0.000 0.341 0.000 0.336 0.336 0.690 0.690 -0.371 0.000 0.112 0.112 0.210 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.000 0.317 0.000 0.033 0.417 0.000 0.000 0.284 0.284 0.162 0.847 0.712 0.335 0.000 0.000 0.317 0.000 0.000 0.000 -0.343 -0.343 0.350 0.000 0.341 0.000 0.336 0.336 0.690 0.690 -0.371 0.000 0.112 0.112 8.225822 -0.821381 5.036679 11.064394 12.025951 6.391560 10.580644 9.616918 9.180106 1.178683 12.089715 11.639911 3.763656 1.763667 2.986047 8.700299 5.223090 11.262842 11.323038 10.318889 8.882601 3.763656 8.135800 10.010797 8.527426 9.337308 3.426627 NA 10.999675 6.906619 9.022619 8.806232 5.536249 10.092089 10.040560 5.500627 8.153113 NA 6.865199 12.337781 6.906619 8.836909 NA 6.155978 8.158837 4.266164 4.223090 -0.821381 8.338569 5.132893 4.960058 10.496676 4.670551 9.516320 10.723662 9.942740 6.800750 11.267817 13.515205 9.846697 6.049062 5.778611 9.885194 2.763667 NA -0.821381 2.638120 10.548295 6.771155 9.682524 16.953118 9.895937 11.289834 11.929824 8.680535 8.752345 10.096816 12.912561 9.058281 8.727520 8.995682 2.178683 8.175877 11.541190 10.898942 12.304757 3.348629 14.088588 8.818925 8.274095 9.137251 6.940249 10.118813 8.206604 6.545020 9.242093 7.011588 -0.821381 10.081827 8.195506 6.995938 11.634796 11.044431 9.927729 7.178698 9.876534 9.961696 8.244787 10.064280 9.388151 10.443141 9.835123 10.606535 9.849354 9.765538 10.295692 8.787877 -0.821381 9.208289 7.863481 10.882169 7.882601 10.870005 7.212121 10.975549 10.150242 7.531845 14.303425 10.732327 10.777681 11.574232 10.873056 6.178699 3.348629 10.026538 9.369757 8.721730 TCGA-BH-A0AY 62 0 NA 777 breast stage iia t2 n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white NA 2 2 4 NA 4 3 6 4 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 3.121176e-07 26.3157894736842 13.1578947368421 10.5263157894737 31.5789473684211 18.4210526315789 9.5188382 9.3864536 11.7588269 8.9321654 8.7533889 8.2775194 10.1868326 9.3045425 10.5222528 12.2875870 10.1414799 10.4202485 0.3827226 11.8216666 1.1196882 9.7358484 5.1727795 8.0023104 8.1706041 12.5672670 3.6050913 13.8223593 7.3330140 9.6634724 10.7508441 5.3368975 -1.2022399 9.9443077 10.6091137 NA 8.7151112 6.5119850 NA 4.6306268 9.4657376 10.1083518 9.2875870 9.4894825 9.4179588 10.6596014 6.0645251 10.2627952 15.0204396 6.4126698 10.0120581 11.0223437 9.8712111 4.2571691 0.7977601 8.3675947 10.4465459 -1.2022399 11.5782788 5.7166014 5.2571691 6.2323672 9.8772238 11.6149226 10.5396273 11.4615195 12.2138768 7.4013651 10.7562917 9.9003971 10.6091137 10.6095151 3.8852034 11.4431723 10.2905936 1.9676482 10.5492831 9.4833638 2.2571615 5.6557210 10.8349427 9.2386082 9.8208003 10.2749913 7.9166803 8.7850032 13.2306723 12.6499759 10.1591345 9.9023377 0.6286100 0.6385800 -0.0340860 -0.0436020 0.2793100 -0.0487480 0.3289800 0.2905900 1.5267000 1.5267000 2.1505000 0.3228600 0.3228600 0.3069700 0.3069700 0.3069700 -0.0212350 -0.0212350 -0.3922100 -0.0168410 -0.0015243 -0.3187900 -0.3187900 0.3713400 0.0688080 0.0421660 0.0421660 0.3721600 0.0000000 0.0000000 -0.0071958 -0.0340860 0.2793100 0.2793100 -0.0487480 -0.0487480 0.3289800 0.2905900 0.2905900 0.9403700 -0.0276710 -0.3756100 0.2923100 0.2923100 0.2923100 0.3445300 0.3228600 0.3228600 -0.3442300 0.3069700 0.3040900 0.3040900 -0.0212350 -0.0212350 -0.0212350 -0.3797700 -0.0168410 -0.0168410 -0.0015243 -0.3298200 -0.3187900 -0.3187900 -0.0269880 -0.2888100 0.0421660 -0.0129890 0.3285000 0.3515300 -0.2965000 0.323 0.323 -0.080 -0.080 0.000 0.000 -0.380 0.000 0.000 0.695 -0.345 -0.319 -0.319 -0.325 0.000 0.000 0.000 0.000 0.629 0.000 0.372 0.328 -0.297 0.000 0.000 0.000 0.000 0.279 0.279 0.000 0.000 0.291 0.291 0.940 0.000 -0.376 2.102 0.292 0.292 0.156 0.156 0.323 0.323 -0.080 -0.080 0.000 0.000 -0.380 0.000 0.000 0.695 -0.345 -0.319 -0.319 -0.325 0.000 0.000 0.000 0.000 0.629 0.000 0.372 0.328 -0.297 0.000 0.000 0.000 0.000 0.279 0.279 0.000 0.000 0.291 0.291 0.940 0.000 -0.376 2.102 0.292 0.292 0.156 0.156 8.423448 NA 6.952557 10.914408 11.964530 7.370553 11.221118 9.826778 8.265019 6.734376 12.170876 12.108019 2.257162 5.083141 3.321308 7.831162 3.842134 10.511555 11.402292 10.575405 9.241719 4.967662 7.871881 9.901027 6.879888 8.762080 NA NA 10.588495 6.763523 6.997411 8.532449 7.914083 9.767723 10.152539 3.655718 8.334957 NA 7.224004 12.412334 6.967664 8.506823 NA 3.751935 8.279539 NA 4.257169 NA 5.498177 4.605091 NA 10.726627 NA 8.040913 10.376112 9.753389 5.119667 10.080827 12.141480 8.792092 1.967648 3.498174 9.799851 3.045670 NA NA 3.605091 12.0765224 5.0456658 8.8201068 11.8216666 9.7913851 10.7750189 12.5672670 10.8044157 9.1706041 10.1938086 13.0936514 10.5320253 8.3675947 8.3732784 0.3827226 6.8957716 10.7076321 11.454387 12.481063 5.352328 12.769635 8.728476 5.842134 9.034949 7.728476 11.116576 6.505099 8.279539 10.141480 6.937290 2.382695 10.124168 4.655718 5.574108 10.614723 10.507254 10.517556 8.621106 8.432550 10.422078 5.916680 10.394110 9.287587 10.550956 10.215064 11.066281 10.290594 10.589716 10.654943 9.235491 5.977649 9.487091 7.146467 10.446546 1.967648 11.578279 7.919273 10.431188 9.877224 7.045667 14.005935 10.234971 10.351368 12.406918 10.567577 3.045670 NA 10.021137 9.965784 9.111756 TCGA-BH-A0AZ 47 0 NA 1919 breast stage iiia t3 n1a cm0 (i+) female 2008 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 3 1 4 3 3 3 4 4 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352509e-06 4.161568e-07 5.88235294117647 31.3725490196078 1.96078431372549 25.4901960784314 35.2941176470588 10.30434505 10.23720482 11.37554114 8.92013666 8.87078421 8.61099491 9.39184010 10.25031772 10.73582558 13.26176493 9.92156293 10.72074856 4.18650056 12.53999200 3.89276987 10.54959419 6.28729682 8.26274978 8.86486554 12.61771957 NA 14.10861180 3.98296620 9.66694916 9.87299739 7.66648961 NA 11.40030464 11.06817441 4.10849100 7.65966844 7.96370877 -0.06145073 6.12839446 9.43941121 10.12592149 10.21527538 9.24120834 9.75954602 10.37788085 2.84546998 9.98159668 15.15165463 8.05504323 9.90291033 11.31442339 11.27953218 5.34795969 5.34795969 9.21585669 11.87041493 -0.06145073 11.42364398 6.73946875 5.86930636 5.02603425 9.83338712 11.63727405 10.77264539 13.02021927 12.48703010 9.17458369 10.79031844 10.23879605 11.02105110 11.06913998 4.36483153 11.56974645 10.17338682 -1.06130019 10.51505373 9.07427877 3.02603868 5.55328062 10.49507542 10.27897591 10.42036881 9.39492373 2.84546998 7.97748830 13.09473150 11.79265858 9.50367152 9.88693662 0.35904000 0.46246000 -0.00995650 -0.00526100 0.00349940 0.01726400 -0.00360110 -0.00539920 -0.48680000 0.00819590 -0.00069303 0.00388540 0.00388540 0.00013863 0.00013863 0.00013863 -0.49329000 0.00360760 0.05281000 0.01195800 0.44715000 -0.01931400 0.37693000 0.44088000 -0.04492200 -0.04492200 -0.04577000 -0.00318590 -0.02479800 -0.46057000 -0.00193990 -0.50162000 -0.49287000 0.00349940 0.01405100 0.45292000 -0.00360110 -0.00097017 -0.00734910 0.46724000 -0.48314000 0.03242200 -0.46142000 -0.46142000 0.00000000 -0.01697900 0.00388540 0.00388540 0.00013863 0.00013863 -0.47455000 -0.47455000 -0.49329000 -0.00802440 -0.00802440 -0.46203000 -0.48596000 -0.48596000 0.01628600 -0.49225000 -0.01931400 0.37693000 -0.46837000 -0.04492200 -0.04492200 -0.00318590 0.00569190 -0.01739100 0.49130000 0.000 0.000 0.000 -0.451 0.000 0.000 -0.452 0.000 0.000 0.000 0.000 0.000 0.377 0.000 -0.459 0.000 0.000 0.000 0.876 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.447 0.447 0.000 0.000 0.441 -0.465 0.000 0.000 -0.461 0.000 0.000 0.000 0.000 0.000 0.000 -0.451 0.000 0.000 -0.452 0.000 0.000 0.000 0.000 0.000 0.377 0.000 -0.459 0.000 0.000 0.000 0.876 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.447 0.447 0.000 0.000 0.441 -0.465 0.000 0.000 -0.461 0.000 0.000 0.000 9.13824185 NA 7.91870882 10.40668430 11.64052558 6.12780040 10.59365284 10.04193589 9.14540056 1.26050748 11.52658125 12.10578839 2.10849100 2.63900057 3.10849100 8.32227385 3.58242353 11.27674864 11.73095301 10.66988841 8.45623858 4.61099528 7.49699035 10.14741343 6.79655103 8.53662178 2.63900057 NA 10.87631104 6.40617439 8.15288867 7.56792566 7.19595680 9.69507566 10.23204108 5.00465869 8.10849466 NA 8.50462357 12.95928895 7.53848229 8.63031300 NA 5.88108459 8.90291018 -0.06145073 5.52353059 -1.06130019 5.08831548 5.14802298 3.02603868 10.04644031 NA 9.41430279 10.26724434 9.82807332 5.74592301 10.30215669 12.20139831 8.21934037 2.84546998 4.02602983 10.77304044 3.69345350 NA 2.52353687 2.39799458 13.37744895 5.86930636 8.69512561 12.53999200 10.68718162 10.65023636 12.61771957 12.63358013 9.01734739 10.24861405 12.81987459 9.78797453 9.21585669 8.70012063 -0.06145073 7.50462357 10.95920214 11.39132544 11.83243969 5.61099528 13.78826624 8.61980767 5.94979637 8.85594144 8.07299595 10.02056540 6.73946875 7.53102659 9.92156293 7.26948672 4.61099528 10.01070195 7.15773800 5.52923063 12.47202081 10.37632143 10.67327904 9.19241686 8.72973221 11.18293321 6.43841595 11.75079285 10.21527538 10.66180366 9.96785667 10.99079777 10.62769383 10.03660155 10.94979666 8.93433663 NA 9.12932011 7.49882608 11.87041493 6.58962119 11.42364398 9.74753359 10.65073952 9.83338712 6.83943561 13.73054622 10.43692002 10.28619075 13.02735764 10.30762137 NA -0.06145073 9.63640584 9.89639689 9.42640944 TCGA-BH-A0B0 56 0 NA 2477 breast stage i t1c n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 black or african american NA 2 2 2 NA 4 3 4 4 5 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.179111e-06 4.508365e-07 18.75 64.5833333333333 0 6.25 10.4166666666667 9.499184 9.470071 11.793175 9.063133 8.023605 9.451466 10.515153 8.922842 10.368704 12.759368 10.240589 10.378585 4.424835 11.958017 2.424841 9.635040 6.167340 8.025893 10.130070 12.858021 NA 13.241636 9.430893 9.611176 10.223246 8.911749 NA 11.028748 9.511483 3.768788 9.563601 7.375449 NA 4.701677 10.189453 9.757820 9.261615 10.516781 9.840091 10.961308 NA 9.434342 14.680228 7.801774 10.086341 10.649209 10.287593 4.582375 3.768788 8.599378 12.339567 NA 11.124476 5.396824 6.081949 5.724397 9.568318 11.696659 10.403437 12.049983 12.682315 7.785093 10.950508 10.391952 10.943263 11.042940 4.009795 11.479076 11.087984 1.046351 10.556891 8.945984 3.632245 5.116714 10.841391 9.732826 9.648467 9.274182 5.009800 11.399251 13.039688 12.273339 10.119395 10.040678 0.52923000 0.52923000 0.00805670 0.00805670 -0.54653000 0.00569190 -0.55872000 -0.54955000 0.00374650 0.00374650 0.00374650 0.00680440 0.00680440 -0.00360110 -0.00221680 -0.00221680 -0.01876500 0.01111800 -0.01986300 0.00249690 -0.00110870 -0.54643000 -0.54643000 -0.54643000 0.01670500 0.01670500 0.01670500 -0.01161100 0.00402430 0.00402430 -0.00899060 0.00805670 -0.54653000 -0.54653000 0.00569190 0.00569190 -0.55872000 -0.54955000 -0.55887000 0.01349200 0.00591770 0.00374650 0.00027728 0.00027728 0.00027728 0.00027728 0.00680440 0.00680440 -0.00360110 -0.00221680 -0.00221680 -0.00221680 -0.01876500 0.01111800 -0.55507000 -0.50443000 0.00249690 0.00249690 -0.00110870 -0.55574000 -0.54643000 -0.54643000 -0.01381500 0.01670500 0.01670500 -0.01161100 0.00291330 -0.55497000 -0.55497000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.544 -0.546 -0.546 0.000 0.000 0.000 0.000 0.000 0.525 0.000 0.000 0.000 -0.555 0.000 0.000 0.000 0.000 -0.547 -0.547 0.000 0.000 -0.559 -0.559 0.000 0.000 0.000 0.000 0.000 0.000 -0.114 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.544 -0.546 -0.546 0.000 0.000 0.000 0.000 0.000 0.525 0.000 0.000 0.000 -0.555 0.000 0.000 0.000 0.000 -0.547 -0.547 0.000 0.000 -0.559 -0.559 0.000 0.000 0.000 0.000 0.000 0.000 -0.114 -0.114 9.063133 NA 6.576146 10.739115 10.937805 7.106675 11.325703 9.593813 9.183695 2.894313 11.523679 11.640818 2.972325 5.099438 3.531756 7.271291 3.582375 11.577901 11.852391 10.713791 9.364642 4.894323 7.512300 10.365997 7.695940 9.578486 1.724388 NA 11.142513 7.244034 7.371855 8.086341 4.874143 9.754112 10.578096 4.853681 8.520436 NA 8.265494 12.685666 7.827685 8.286640 -1.275437 1.531768 7.986492 0.309409 4.309358 NA 6.576146 4.258270 4.452319 10.313580 NA 8.232192 10.037847 9.448058 5.713083 10.472590 14.225768 9.098350 3.309365 4.894323 10.702392 1.531768 NA 2.531743 1.046351 13.0318112 5.0819489 7.5445758 11.9580166 10.5057567 11.1498751 12.8580208 11.4890612 9.1548495 10.6256410 13.2631315 9.1124142 8.5993784 9.2548033 0.7243883 6.5636005 11.1290063 11.430245 12.573313 5.294253 14.781456 9.303713 7.142249 8.314984 6.879216 10.393951 6.981785 8.277066 10.240589 7.960411 3.183836 10.374551 5.863948 5.736407 10.657719 10.734226 10.884583 7.335422 8.815832 11.292353 7.403877 10.680334 9.261615 11.075888 9.861388 10.587034 9.897449 10.081399 10.943868 9.153804 1.046351 9.805627 6.512300 12.339567 6.324310 11.124476 8.641769 10.268709 9.568318 7.138025 14.003754 10.821771 11.128208 12.249183 10.505347 4.790485 -1.275437 10.129538 9.994108 9.541380 TCGA-BH-A0B1 66 0 NA 1148 breast stage iib t2 n1a m0 female 2007 NA yes infiltrating ductal carcinoma 1 white NA 1 2 NA NA 4 3 3 4 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 4.161568e-07 20.5128205128205 10.2564102564103 7.69230769230769 41.025641025641 20.5128205128205 10.2773549 10.5550405 11.8312341 9.4452092 8.9020449 9.3120173 10.1200968 9.7342251 9.1773861 13.7167246 11.3755040 10.7517885 0.5756028 12.4599767 3.8975406 9.7310661 4.0018833 8.9732898 8.8782542 12.5847441 3.2760499 13.2364469 7.1340361 9.6164941 11.9545875 8.1605779 -0.4243004 7.8992554 12.1714555 1.5756028 7.7228205 7.9353649 2.5756270 4.6630770 10.0868738 11.1759929 9.8935932 10.1196137 9.3371665 11.6258041 1.1605975 10.7823244 14.1904402 8.6585628 9.6945499 11.9350904 11.5118852 4.0991774 -1.4243004 9.3659639 12.0273416 NA 11.3325886 8.0247640 5.0834091 4.7455385 10.5582524 11.8375633 10.4471356 12.2270034 12.9036591 7.8092350 10.8958518 10.3800731 11.9218520 11.0475445 5.2194706 11.7531906 9.2013241 1.5756028 10.0599348 11.3231790 2.5819056 4.8610174 10.1369032 9.7093997 10.0442393 11.6315756 2.8975502 8.5742056 12.0600606 11.3720606 10.2436139 9.0734671 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.0533737 NA 6.8470786 9.6369865 10.9740918 6.9054111 11.1232329 9.8279851 9.4919501 1.7455385 11.8591378 11.9680240 4.2760574 0.8975502 1.5756028 8.1147741 2.4825127 10.8074365 11.6597593 10.9350904 9.1089452 4.0674666 7.7604904 9.2907193 6.2760555 9.2391734 2.0350608 NA 11.2868521 7.0553952 6.5356175 7.4428937 8.2515724 9.4618302 10.0498283 1.7455385 8.8540649 -1.4243004 6.8702365 11.7411505 7.3732767 7.9828829 NA 6.2194706 8.7935731 4.3305010 3.3829715 -0.4243004 4.3035324 6.8489909 1.7455385 10.5571826 NA 9.5093059 10.2387286 9.9003585 4.8044357 9.4810024 13.7223829 8.2898607 3.0350432 3.7850692 12.2838371 1.3829439 NA 2.1605653 1.3829439 14.147924 5.018559 8.611789 12.459977 9.492987 10.389397 12.584744 12.296073 9.259487 11.532899 13.077888 10.605938 9.365964 8.857545 -1.424300 7.099177 11.939887 10.670683 11.890906 4.684140 13.527718 8.963632 5.641705 8.810433 9.403752 9.631460 5.609037 5.289860 11.375504 6.980757 2.035061 10.440575 5.001879 7.865035 10.617959 9.437478 10.638673 9.752412 8.376515 12.186063 4.408508 10.816022 9.893593 9.919911 9.361885 11.309690 9.500428 11.107484 10.107484 9.032996 -1.424300 8.632754 8.026600 12.027342 5.083409 11.332589 7.417966 9.731066 10.558252 6.879396 13.350094 10.176457 10.266923 13.088973 9.465880 2.575627 -1.424300 10.932067 10.260364 8.743034 TCGA-BH-A0B3 53 0 NA 1203 breast stage iib t2 n1a m0 female 2007 NA yes infiltrating ductal carcinoma 2 white NA 3 3 4 4 1 1 5 5 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 8.323135e-07 2.427581e-07 19.3548387096774 29.0322580645161 6.45161290322581 19.3548387096774 25.8064516129032 9.2690093 9.2877401 11.3527178 9.3348172 8.7076432 9.0659382 9.0996453 9.9889976 12.0087553 12.5782232 9.8780098 10.4382359 0.6188964 12.0944619 1.4262111 11.1724844 6.5495922 8.4100179 8.6412230 6.9631516 NA 11.5399522 9.6883049 10.3962707 11.5835569 7.6929962 2.7063095 12.4868287 11.1604358 3.2038119 7.5613697 8.4213714 2.3193000 6.7937802 8.8512759 9.8349946 9.5272477 9.7364982 9.1934487 10.6618824 6.1187003 6.6018480 15.8831694 8.4189299 8.4674780 11.7555258 10.3505984 3.0782853 NA 9.4799419 11.0700662 NA 9.5591687 5.0945866 6.7987647 6.1962844 8.1167068 11.7355240 10.2739386 11.3382439 12.7920637 8.1443758 11.3741600 10.6055362 11.3563137 11.0247943 4.7063206 12.3695621 10.2649638 0.6188964 10.6495222 9.7468493 2.8259688 5.2627113 11.7662191 9.9928078 10.8304392 9.3712358 2.5257432 8.5151873 12.9790849 11.9489316 9.6976731 9.6335731 2.09250000 0.99053000 0.00000000 0.47873000 -0.16612000 1.03540000 0.50846000 0.10555000 0.03256300 0.03256300 1.12360000 1.20890000 -0.47427000 0.04840400 0.04840400 0.04840400 -0.13199000 0.36084000 -0.12043000 -0.15771000 -0.07227400 0.42351000 -0.03395000 0.08334200 -0.13510000 0.52625000 0.49009000 0.21906000 -0.15260000 0.23071000 -0.43908000 0.00000000 -0.16707000 -0.19987000 -0.48323000 -0.47586000 0.50846000 0.10555000 -0.19212000 0.06895200 -0.08797700 0.03256300 -0.13070000 -0.13070000 -0.13742000 -0.13044000 -0.47427000 -0.16154000 -0.10127000 0.04840400 0.17935000 0.17935000 -0.13199000 0.04613300 0.05965100 -0.12043000 -0.13303000 -0.04197400 -0.09604400 -0.03558500 -0.17360000 -0.03395000 -0.47754000 -0.13510000 0.52625000 -0.00097017 0.28441000 -0.16879000 -0.16879000 -0.178 -0.178 0.000 0.000 -0.132 0.000 -0.120 -0.133 0.000 0.285 0.000 0.000 0.000 -0.176 0.000 -0.135 0.355 0.311 0.311 0.000 0.000 0.000 -0.169 0.000 0.000 0.000 0.000 -0.167 -0.167 0.276 -0.151 0.106 0.106 0.000 0.000 0.406 0.406 -0.131 -0.131 0.000 0.000 -0.178 -0.178 0.000 0.000 -0.132 0.000 -0.120 -0.133 0.000 0.285 0.000 0.000 0.000 -0.176 0.000 -0.135 0.355 0.311 0.311 0.000 0.000 0.000 -0.169 0.000 0.000 0.000 0.000 -0.167 -0.167 0.276 -0.151 0.106 0.106 0.000 0.000 0.406 0.406 -0.131 -0.131 0.000 0.000 8.1657497 NA 4.7686025 10.6812386 11.8709291 5.9582604 11.2620349 9.4290171 8.6797267 -1.3811975 11.9304615 11.5704913 2.4262111 NA 3.9407869 9.8721117 4.2038198 11.5610030 11.8137658 11.7263991 8.7442684 4.4768353 8.8452674 9.8380236 7.5436675 8.2445641 6.8996264 2.5257432 10.6297328 1.9407681 7.9088741 8.5788568 5.1734433 10.3829554 11.0736684 2.0783024 9.8092971 4.1424134 7.7584065 11.9072886 7.8809499 7.4229865 -0.3811975 2.7887901 7.5903984 NA 2.7063095 NA 5.6849449 1.7887692 6.0367077 11.1894224 2.7887901 10.5261214 10.7739896 10.4026719 6.0864611 9.9955231 14.5532371 8.6300825 4.7273814 4.4768353 10.1419269 3.4768353 8.0966134 1.6188494 6.1266487 12.1245426 8.3569475 7.3670478 12.0944619 10.0482618 11.6857852 6.9631516 8.8295265 9.4205635 10.7981422 13.9396909 10.8043500 9.4799419 8.9464077 0.6188964 7.7429763 10.7758862 10.970899 12.276397 6.079107 14.480353 9.274386 7.540696 8.940783 8.989401 9.557023 7.783762 5.596136 9.878010 11.017332 -1.381198 10.084932 6.773673 9.396603 12.655716 10.121687 10.523113 7.716887 9.470604 8.483041 9.182051 10.868330 9.527248 10.205226 9.758406 11.034069 11.020001 11.069809 10.542925 9.397754 -1.381198 9.636582 7.222815 11.070066 9.659145 9.559169 6.150237 10.155102 8.116707 7.911177 13.892906 10.401444 10.159952 13.007949 11.297235 2.525743 -1.381198 10.014389 9.640529 9.287740 TCGA-BH-A0B4 65 0 NA 1191 breast stage iiia t2 n2 m0 male 2007 NA yes infiltrating ductal carcinoma 6 white NA 1 1 1 NA 4 3 1 2 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.629947e-06 2.080784e-07 11.1111111111111 27.7777777777778 5.55555555555556 33.3333333333333 22.2222222222222 9.8714326 9.5913247 11.1304320 8.8314108 9.4116309 8.1905951 8.7713330 9.2570620 10.4798859 13.0693720 10.8022023 10.3724230 0.9426834 13.8144445 3.2645965 10.3385587 5.8334391 8.8191844 9.1075746 12.0700171 -0.6422791 13.4515352 5.5475300 9.5388572 11.1794791 6.9797567 NA 12.5084044 9.8704455 NA 7.8006489 6.2403487 NA 5.1390642 8.9180379 9.8545588 9.1291946 9.7755576 9.3925040 10.8958940 2.5276209 10.2877031 14.7660348 7.8982979 9.7850179 10.7408693 10.7397886 4.1125917 5.1650597 9.0141299 10.6402144 NA 10.5382359 8.5425804 5.0015591 4.8495590 9.1746888 11.2672232 10.2055455 11.5937193 12.3545316 9.0719506 10.4876321 10.2802895 10.8500591 10.2411120 3.6796377 12.3218654 10.8600396 0.3577209 10.2832595 8.7196489 2.1671331 5.5671590 10.6020690 9.5226119 11.0047137 10.3786850 1.9426834 8.3577051 11.9797569 11.2698459 9.4753482 9.4116309 0.00429390 -0.51138000 0.02817200 0.53288000 -0.00556520 -0.50776000 -0.01480600 -0.59937000 -0.00196760 -0.00196760 2.50260000 0.04256200 -0.01043500 -0.01191400 -0.02096300 -0.02096300 0.01402300 0.99900000 -0.51110000 1.09100000 0.02452000 0.00024951 0.98907000 2.11470000 0.00844640 0.03366200 -0.00901830 1.20020000 -0.42552000 0.00277440 0.00983900 -0.55619000 -0.60856000 -0.53390000 -0.02181100 -0.02181100 -0.54867000 -0.59937000 -0.51838000 0.52920000 0.77076000 -0.57765000 0.00830720 -0.53705000 0.02185600 0.55492000 -0.01043500 0.03718900 -0.53735000 -0.02096300 -0.02096300 0.00858560 0.01402300 0.99900000 0.23361000 -0.57903000 -0.00432060 -0.00432060 0.02452000 -0.53197000 -0.53258000 0.98907000 -0.55569000 0.00844640 -0.01810600 -0.50662000 -0.04360400 0.05067500 -0.50351000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.484 1.017 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 0.000 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 -0.486 0.000 0.000 0.000 0.524 0.524 2.503 2.503 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.484 1.017 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 0.000 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 -0.486 0.000 0.000 0.000 0.524 0.524 2.503 2.503 0.000 0.000 0.000 0.000 8.2795460 NA 6.5671590 10.4211002 12.5616648 5.9519561 10.0745246 8.7448607 8.9860778 3.2645965 11.8014257 11.9353274 4.6796321 3.1650597 -0.6422791 7.6197996 4.1125917 10.5598289 11.6631969 10.3986797 9.5061816 2.1650758 7.7964972 9.6186246 7.6150925 4.4021014 NA NA 10.3220460 5.5865246 7.5376145 7.9426676 5.8171372 10.6212912 9.4583674 4.0581433 8.8654998 1.6796490 6.9045997 12.1025389 6.9650350 9.2172399 NA 4.1650597 7.6705883 NA 5.8006489 NA 5.2884435 2.7250867 4.2156864 10.7975360 NA 7.7881578 10.3570004 10.4953367 4.8495590 9.7207446 12.4537613 8.6244917 1.3577209 4.2156864 11.7476053 2.8171320 NA 2.1650758 2.5276209 13.9120715 5.6796321 8.0371851 13.8144445 9.7585845 9.3647324 12.0700171 11.6347018 9.1521210 10.3612230 12.5219835 11.0248166 9.0141299 8.2675981 -0.6422791 7.7839699 11.3046114 11.3324781 11.9304053 6.4557365 12.9484032 8.6953271 6.0442061 9.1357821 9.3278111 10.4799119 7.0581444 7.7923335 10.8022023 7.4291674 4.4451705 9.8212295 7.0371856 6.3325791 10.7681564 10.5251232 10.3442582 6.9501616 8.8635167 10.9351339 4.7500222 10.0553068 9.1291946 10.8319180 10.3883722 10.5604411 10.1569867 10.2031952 10.7964969 9.0424536 NA 9.3900952 7.4451680 10.6402144 5.5074522 10.5382359 6.6705883 10.8738975 9.1746888 6.4766458 13.8787534 10.3577051 10.0168090 12.6610578 10.7201969 2.3576927 0.3577209 10.0538032 9.4998122 9.6773772 TCGA-BH-A0B5 40 0 NA 2136 breast stage iiia t2 n2a m0 female 2007 NA yes infiltrating lobular carcinoma 5 white not hispanic or latino 1 2 2 1 4 3 4 4 4 5 3 3 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.560588e-06 3.467973e-07 14.2857142857143 64.2857142857143 3.57142857142857 14.2857142857143 3.57142857142857 10.541090128 10.218516013 12.176823493 9.992483936 7.758074606 9.709471237 10.348583435 9.802939903 9.888690440 12.367284319 11.348583490 10.807511742 6.829627609 12.955521959 2.939565111 9.858424773 6.393278899 8.438367297 9.448045253 13.024254446 3.663925224 13.814609721 8.008456635 9.238315404 10.993664456 6.190786693 1.000937447 8.465847978 9.712915908 1.415974946 8.889705333 7.041708427 NA 4.197362184 10.361809255 10.641207045 9.872353989 11.898177321 10.016377225 11.783414377 7.937599808 10.443214494 14.601455826 8.088036093 10.710907488 11.522399001 11.309301151 5.427227349 7.130245180 8.899815491 12.280282502 NA 11.080891259 5.915845925 6.177551094 6.067051384 10.486791388 12.271646796 10.832269379 12.195103361 13.185475923 8.469925445 11.150709251 10.906271381 11.506773691 11.655001355 5.381785182 11.614751569 10.233383003 0.001009533 10.256384208 9.088424936 4.503889326 6.052624562 11.009157279 10.531043265 9.855311095 9.561931715 3.545276500 10.263448558 13.077165325 12.914537224 10.582162686 9.813674268 0.6788200 0.6386500 0.2576200 -0.0049844 -0.3037500 0.3687100 -0.2929600 -0.6277900 -0.0074720 -0.0074720 0.0073609 0.0223040 0.0258120 -0.2948500 -0.2948500 -0.2948500 0.2998500 0.2975600 0.0000000 -0.2865500 -0.2776200 -0.2342300 -0.2342300 -0.2342300 0.0434400 0.0434400 0.0406110 0.0391950 -0.2663700 -0.2908300 0.0091705 0.0050285 -0.3002800 -0.3037500 0.2966000 0.2966000 -0.2929600 -0.6277900 -0.6277900 0.0148880 0.0022193 0.0171240 -0.2911800 -0.2911800 -0.2911800 -0.2709300 0.0258120 0.0258120 -0.2934300 -0.2948500 -0.2948500 -0.2948500 0.2998500 0.2975600 0.2975600 0.0000000 -0.2865500 -0.2892800 -0.2776200 -0.7114900 -0.5720000 -0.2342300 0.0105520 0.0434400 0.0617940 0.0391950 0.0207630 -0.6080600 -0.6660500 0.000 0.000 -0.295 -0.295 0.300 0.300 0.000 -0.287 -0.278 0.366 -0.282 -0.572 -0.572 0.000 0.000 0.000 0.000 -0.266 0.364 0.000 0.000 0.000 -0.608 0.000 0.000 0.000 0.000 -0.304 -0.304 0.297 0.297 -0.293 -0.628 0.000 0.000 0.000 0.000 -0.291 -0.291 0.000 0.000 0.000 0.000 -0.295 -0.295 0.300 0.300 0.000 -0.287 -0.278 0.366 -0.282 -0.572 -0.572 0.000 0.000 0.000 0.000 -0.266 0.364 0.000 0.000 0.000 -0.608 0.000 0.000 0.000 0.000 -0.304 -0.304 0.297 0.297 -0.293 -0.628 0.000 0.000 0.000 0.000 -0.291 -0.291 0.000 0.000 7.7888645 NA 6.5809067 10.7251917 11.1194706 7.1692496 11.2325833 8.2845599 8.7328580 3.3701922 11.6945943 10.7955919 3.2739783 1.8754262 4.2986437 7.9839558 3.8422648 10.2681389 11.2259687 10.8275106 8.5733465 5.9237934 8.2265711 10.2297808 6.6156723 5.7197803 3.4160020 NA 10.7699734 8.3047428 7.4328083 8.1181723 6.0084578 10.7515128 10.8818211 3.5452765 9.6514155 -0.5840251 7.8957800 12.3299175 9.6460201 6.4874622 NA 1.7379463 8.0084566 NA 3.7379247 NA 5.2361788 4.3533445 3.5859240 10.9967292 1.4159749 7.9782420 10.0998715 9.9585479 5.3817852 10.1311037 12.7407427 8.7942943 3.2739783 3.2233608 10.9272581 5.9551593 NA 0.7379463 1.8754262 12.0030457 6.3817835 7.6181234 12.9555220 10.3993495 10.5878019 13.0242544 11.7159231 9.1996363 11.4099994 13.3682859 10.6819076 8.8998155 9.5225625 0.7379463 7.0919568 11.9585479 11.37672563 11.98941011 8.64481815 13.66407468 8.50611197 6.22335497 9.72831544 9.36801267 10.59995133 7.17422263 8.57208285 11.34858349 5.67338682 1.00093745 10.83121325 6.21041614 8.10221982 10.99720023 10.29251651 10.40077411 7.47128177 8.40326346 12.52002498 5.49281457 11.99515995 9.87235399 10.59684115 9.49548431 10.90710112 10.05171767 10.47635779 10.67868173 9.23617855 NA 9.32754883 7.38754349 12.28028250 5.55555237 11.08089126 7.29864274 10.63732387 10.48679139 7.48746223 13.39019011 9.97537669 10.14519546 12.66496489 11.19119836 2.32287996 -0.04305123 10.38214456 10.25992071 9.77520005 TCGA-BH-A0B6 47 0 NA 2483 breast stage i t1c n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 3 2 2 7 4 1 6 6 2 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 1 0 0 0 0 4 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 4 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1.654223e-05 7.109345e-06 6.34005763688761 81.2680115273775 1.72910662824208 8.5014409221902 2.16138328530259 8.6406282 9.0354067 11.6042496 8.7093744 8.0022401 9.7297805 10.1803431 9.8194665 10.0742260 14.1224838 10.8305314 10.5748476 NA 11.8530300 -0.3309732 9.1356708 5.0441230 7.9146375 8.5486678 12.4111834 NA 14.0563278 5.6463643 9.4402521 10.0172594 7.1729105 NA 14.0710670 8.6775132 -0.3309732 10.3884734 6.9728649 NA 5.4764400 9.6363109 9.7025076 9.0646186 10.2183879 9.7697469 10.3348645 8.7011304 10.1463369 14.4576755 6.1654196 10.9358711 10.5524916 10.2549859 3.7983720 8.2727110 8.7025076 10.6701409 NA 10.8181965 7.3020796 8.0111590 4.6914504 10.3699577 11.6434991 10.1828122 10.8377567 12.2122372 8.9486952 10.7957890 10.1511413 11.0638152 10.3953027 3.9170116 11.2067883 12.0085170 -0.3309732 10.4699844 8.7631622 1.6708856 6.3764432 10.4168580 9.3102331 9.4155990 9.5990827 3.3695223 9.0222313 12.7617591 12.2751427 9.6035127 9.4764394 0.259810 0.259810 0.128890 0.098270 0.327530 -0.070269 0.105120 0.105120 -0.052968 -0.052968 0.308410 0.104100 0.104100 -0.131220 0.090430 0.090430 0.068091 0.000000 -0.154640 -0.115740 -0.361020 0.108910 -0.493230 -0.168910 0.140430 0.140430 0.136960 1.329300 -0.081206 -0.367480 0.059937 -0.396590 0.059508 -0.197250 -0.070269 -0.070269 0.105120 0.105120 0.105120 -0.051856 -0.051856 -0.396300 -0.010646 -0.010646 -0.010646 -0.094460 0.104100 0.144440 -0.131220 0.134800 -0.389840 0.083920 0.068091 0.000000 0.000000 -0.154640 -0.059000 -0.311080 -0.361020 -0.132250 -0.341860 -0.364200 0.114040 -0.342510 0.140430 0.154120 0.021183 -0.338250 -0.338250 0.104 0.104 -0.131 0.000 0.000 0.000 -0.155 0.000 -0.361 -0.140 -0.140 -0.342 -0.342 -0.389 -0.286 0.140 0.140 -0.367 -0.108 0.154 0.154 0.000 -0.338 0.000 0.000 0.113 0.113 0.000 0.000 0.000 0.000 0.105 0.105 0.000 0.000 -0.115 0.229 0.000 0.000 0.000 0.000 0.104 0.104 -0.131 0.000 0.000 0.000 -0.155 0.000 -0.361 -0.140 -0.140 -0.342 -0.342 -0.389 -0.286 0.140 0.140 -0.367 -0.108 0.154 0.154 0.000 -0.338 0.000 0.000 0.113 0.113 0.000 0.000 0.000 0.000 0.105 0.105 0.000 0.000 -0.115 0.229 0.000 0.000 0.000 0.000 8.4004034 7.2801091 6.5270656 11.3601737 11.7889983 6.5460919 12.1098240 10.1336200 10.2378054 1.6690721 12.0526539 12.2634873 0.6691175 1.9910274 0.9910274 7.1488650 5.3833310 12.3431664 11.8281675 9.8226366 9.0784756 5.5270641 7.0044744 10.7415522 9.1089154 5.1609363 NA NA 10.3375264 6.2236735 6.5998221 8.5379072 6.5998221 10.5057701 9.6108658 4.9728672 8.8626098 -1.3309732 6.9591036 12.4357170 6.4372694 8.7066314 -1.3309732 5.0614004 8.1366902 4.6690835 2.8390123 0.6691175 8.5669300 5.7709030 6.2984420 10.8443222 NA 7.3485644 10.5536367 9.6312576 7.2801091 11.1739035 15.0090737 9.8644567 5.7025079 5.9637053 11.2542818 0.9910274 -1.3309732 NA 0.9910274 11.5262628 4.8979035 8.5654171 11.8530300 9.7815241 10.5321093 12.4111834 9.3841886 8.6520781 10.3446006 12.6885884 9.0635472 8.7025076 9.4529014 -0.3309732 7.3590827 11.0517086 10.9828179 12.6006531 6.8539595 13.6021292 8.5894373 8.2502852 8.4021001 6.4105514 10.3659565 9.3738528 8.1808371 10.8305314 7.6718998 0.9910274 9.8143799 5.5517283 7.3541136 9.6115990 10.7999768 9.9140429 7.8514792 9.0408612 10.4401613 8.4828656 9.6110418 9.0646186 11.4908585 10.1468428 10.6290865 10.2851739 9.7644815 10.3931721 8.1946052 9.8314759 9.4354975 7.4796558 10.6701409 9.2540472 10.8181965 6.3970054 10.8629179 10.3699577 7.2874704 13.6404485 10.4210469 10.4748284 12.3835447 10.4113940 8.3237204 3.5125682 9.4892635 8.7957890 8.2004661 TCGA-BH-A0B7 42 0 NA 2559 breast stage iib t2 n1a m0 female 2006 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 4 NA 7 1 2 6 5 9 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 3.81477e-07 6.935946e-08 30.7692307692308 23.0769230769231 0 30.7692307692308 15.3846153846154 10.3500751 9.9543958 11.8561496 9.5924197 8.1773822 9.9632039 10.2169105 10.3743621 10.4617793 14.2254687 10.2998298 10.5215794 3.2704841 17.6804251 3.6448830 10.4444925 5.1594597 8.8010063 6.9079218 12.3705698 NA 11.8462409 6.3100201 9.0983859 10.0357315 8.4013002 1.8375396 9.9014664 10.9740106 1.3229665 8.9994197 8.7152763 NA 5.8010060 10.0649074 10.7256665 9.6792536 10.4515057 10.2536964 11.5376250 12.4300826 8.3689137 14.9153993 7.4164707 10.2637969 11.2166938 11.2918314 6.3100201 5.4928851 9.1942043 12.9876602 -1.4843885 11.1189985 6.0854586 8.7103608 5.1303131 9.8665431 11.6364899 10.5664730 11.5768064 12.6239651 7.7682697 11.3828828 9.9875687 11.1628376 11.0491771 4.6241301 11.6366518 9.0273567 -0.4843885 10.3917372 8.7753472 2.8382459 6.4928835 9.1809400 9.7256665 9.8153844 12.6464963 3.0391735 9.3221537 13.2960413 12.4071030 10.3599175 9.7575872 0.0772080 0.4657000 -0.0224690 -0.0224690 3.6569000 0.4985700 0.0129870 0.0129870 -0.2765000 -0.2765000 1.4115000 0.0000000 -0.0959120 0.0416000 0.0416000 0.0416000 -0.1757500 -0.0480720 -0.1855900 -0.1663700 0.0041632 -0.0674580 3.6569000 0.0034687 -0.0598070 -0.0598070 -0.0598070 -0.0015243 0.0339720 0.0772080 0.1999900 -0.0224690 -0.0193140 0.0831730 -0.1465700 -0.1382000 0.0129870 0.0129870 0.0425900 -0.0410240 -0.0878440 -0.2765000 -0.3769000 -0.3769000 -0.1919900 -0.2094100 -0.0959120 -0.1323600 0.0416000 0.0416000 0.0416000 0.0416000 -0.1757500 -0.1097100 -0.1097100 -0.2419500 -0.1663700 -0.1663700 0.0041632 -0.1182200 -0.0674580 -0.2962700 0.0188030 -0.0598070 -0.0598070 -0.3775200 0.3318900 -0.1334200 -0.2268400 -0.132 -0.132 0.000 0.000 -0.110 -0.110 -0.242 -0.166 0.000 0.000 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.310 0.310 0.000 0.000 0.332 -0.227 0.000 0.000 0.000 0.000 0.000 0.000 0.294 0.294 0.000 0.000 0.000 0.000 -0.277 -0.176 -0.377 -0.192 0.000 0.000 -0.132 -0.132 0.000 0.000 -0.110 -0.110 -0.242 -0.166 0.000 0.000 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.310 0.310 0.000 0.000 0.332 -0.227 0.000 0.000 0.000 0.000 0.000 0.000 0.294 0.294 0.000 0.000 0.000 0.000 -0.277 -0.176 -0.377 -0.192 0.000 0.000 8.2367031 7.8352761 7.8330166 10.2528514 11.0423478 6.4426118 11.9017360 9.8200068 8.8239429 3.5155989 12.2263029 11.4308579 2.7635391 3.9079194 2.3229665 8.3453267 4.1303131 11.0401457 11.7241432 10.5722418 8.5843823 7.3035068 8.1915612 9.9888024 8.3325876 8.6729511 4.1880290 1.3229665 11.5221054 6.6653516 7.6979983 8.2837885 6.9953839 9.4576567 9.9963943 5.2021042 8.1594602 NA 7.8033162 12.5001115 6.7347719 7.8599000 NA 7.1413132 8.0949201 1.8375396 4.8010086 -1.4843885 7.5708864 5.0617287 4.6030684 10.9431788 4.3229593 10.0238940 10.5562363 9.6500303 6.2367031 10.9765718 13.1730900 9.0883043 4.6653530 5.3735856 10.3716404 2.5156115 NA 0.8375396 2.8375396 12.6475414 6.7201758 12.0687533 17.6804251 9.9455338 11.3069704 12.3705698 9.2212364 9.1800514 10.6798825 13.6995107 10.9457952 9.1942043 10.1057233 0.5156115 7.2804757 11.5870664 11.010460 12.517100 7.085460 14.384908 8.869854 7.975036 9.487866 7.584382 9.876473 8.013456 7.958547 10.299830 6.521228 3.270484 10.408147 8.393655 7.504118 12.914815 10.941082 10.310426 7.753531 9.473432 10.992856 7.688031 10.601475 9.679254 9.968360 9.853783 11.529624 10.562728 9.255385 10.037695 9.982190 2.322966 10.146458 9.427782 12.987660 8.308395 11.118999 7.392121 10.944603 9.866543 7.277155 13.168393 10.629346 11.163737 12.030195 10.651313 6.805623 2.100574 10.981935 10.159911 9.104319 TCGA-BH-A0B8 64 0 NA 1569 breast stage i t1b n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white NA 1 1 NA 1 NA NA 1 4 5 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.427581e-07 17.8571428571429 28.5714285714286 3.57142857142857 32.1428571428571 17.8571428571429 10.3942776 10.5723287 11.6786067 9.8572400 8.4825801 7.7474653 9.9269490 8.9619086 10.8078377 13.3588998 8.7459230 10.6836500 -0.1229625 13.1740883 3.3365262 9.2423293 5.3848960 7.8543803 9.8464869 13.2380846 7.3689534 14.3335511 5.4006609 10.4174754 10.8056188 7.2779801 NA 10.6800206 12.6624507 4.9645650 11.4218234 6.8137389 3.1990284 4.4620654 9.7210214 10.1291744 10.8280207 10.6755721 9.3528338 11.3629297 0.4620523 11.2052143 15.0860777 7.2316138 9.6353236 12.8099610 11.6090558 4.2694147 7.3568806 9.4172285 11.0470254 NA 11.4606533 7.4006626 4.8078392 4.5495275 9.7194508 12.2401400 9.8714539 11.4848930 12.7724863 8.0594948 10.8392734 10.8990936 11.5537187 11.2707590 5.8078366 11.3781911 12.4966326 NA 10.0816716 9.3241837 2.6104638 4.2694147 11.2012809 9.9221775 10.4297695 9.8493622 9.5548200 8.3528340 11.7379933 11.1800248 10.1774529 9.1717212 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.3344811 1.1990598 5.0669244 10.6011878 11.8019129 7.0029275 11.0838095 9.3178139 9.4938607 -0.1229625 10.6848577 10.6571357 6.0767728 5.7839909 3.6319890 9.2843681 3.1990284 9.3789375 11.8641867 10.4964033 8.7688840 1.1990598 7.3158922 10.1421293 5.9539171 9.9973383 3.4620654 NA 9.7490056 6.9160192 5.9960407 8.8225441 4.1250311 9.7853053 9.9973383 4.4006609 8.4807268 NA 7.2434225 13.0495279 8.0115269 7.8312965 NA 6.9160192 7.8371025 NA 4.4006609 NA 4.5775376 4.8712276 2.1990284 10.9668818 -0.1229625 7.6219339 10.6456982 10.3599083 3.2694222 10.2163936 12.7365381 8.1297657 1.6844597 2.0470148 13.9803062 7.3848951 NA NA 0.8771160 13.695029 5.368953 7.780982 13.174088 9.529049 10.799685 13.238085 11.070010 9.677191 11.203530 12.159175 12.321209 9.417228 7.953916 2.336540 7.577540 11.016332 10.6527106 12.2655213 9.4714251 14.1146435 8.4201320 5.1625041 9.4760833 9.1578711 9.7831492 5.5209565 8.3324278 8.7459230 7.7779674 1.1990598 12.3511865 4.5209565 6.4997375 10.2313497 9.0755455 10.9201276 6.9908426 7.8771007 12.5974515 3.9645650 11.5446932 10.8280207 11.4622977 10.2635018 11.4340853 9.3190071 10.5119114 10.5317364 9.3148524 0.4620523 8.2656990 6.7959630 11.0470254 3.9645650 11.4606533 6.6319875 10.0619757 9.7194508 7.2564786 14.0248618 9.8210804 9.4936491 12.6202518 9.8904230 2.0470148 2.6489946 10.9350921 10.3431768 8.7612710 TCGA-BH-A0B9 44 0 NA 1572 breast stage ia t1c n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white NA 3 3 4 4 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 8.669932e-07 2.427581e-07 21.875 37.5 9.375 18.75 12.5 8.9657843 8.5672347 10.7090676 9.0078074 9.3468284 8.9291424 8.6731158 11.0268214 10.5595496 11.8226732 11.9086192 10.7921193 -1.1590736 10.6054737 2.3004459 10.1635083 7.8211566 8.6927658 11.5465412 6.3645794 -0.5741111 8.7282372 7.8744398 10.7584970 11.3593011 2.0109588 -2.1590736 10.8917157 10.5663830 2.0109588 9.1996679 6.6386777 3.7717588 3.3956112 9.2865490 11.2100688 8.8197273 9.5340680 9.7452750 10.2092504 1.1629190 8.8282809 11.4650125 7.9905862 9.4880209 10.2704235 9.9719091 2.3645724 NA 9.1980189 9.9271529 1.5414653 11.1102896 6.3408631 7.3408622 6.3994377 7.8771903 12.8031446 11.2299758 10.9584975 12.8979931 7.7776544 10.9836025 11.2611414 11.3196600 10.6376648 4.1078050 11.4701457 10.0716377 NA 10.2680677 9.9148236 3.5692116 5.4703742 12.1144481 11.0871635 10.8288137 8.9780080 -0.5741111 5.5824837 12.3674549 11.9559791 10.3070932 9.8602600 0.65774000 0.06179400 -0.56624000 -0.01450300 -0.00180140 -0.03667400 -0.54078000 -0.00263220 0.02904400 0.02904400 0.07570300 0.02412700 0.49649000 0.00847430 0.53573000 -0.00097017 1.61650000 -0.06933200 1.72130000 -0.56823000 0.04897200 -0.50619000 -0.50619000 -0.00622860 0.90936000 0.08435400 0.46468000 0.03453600 -0.27176000 0.01768400 0.03637000 -0.55236000 0.02468900 -0.02876500 -0.58078000 -0.61066000 -0.54078000 0.00000000 -0.02151000 0.03750000 0.00305220 0.02904400 0.57451000 0.57077000 -0.56331000 -0.53561000 0.02904400 0.05394800 0.02820000 0.07771800 -0.00097017 -0.10395000 1.57660000 0.00597000 0.02006300 -0.10250000 -0.56435000 -0.56435000 -0.46067000 0.07455200 -0.50619000 -0.50877000 -0.06517900 -0.50494000 -0.38940000 -0.55547000 -0.52287000 -0.53368000 -0.54804000 0.000 0.000 0.000 0.000 0.569 0.000 0.567 -0.564 -0.446 0.000 0.000 -0.506 -0.506 0.000 0.000 0.000 0.000 0.000 0.000 -0.555 0.000 -0.523 -0.534 0.000 0.000 -0.552 -0.552 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.035 -0.536 0.000 0.000 0.000 0.000 0.000 0.000 0.569 0.000 0.567 -0.564 -0.446 0.000 0.000 -0.506 -0.506 0.000 0.000 0.000 0.000 0.000 0.000 -0.555 0.000 -0.523 -0.534 0.000 0.000 -0.552 -0.552 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.035 -0.536 0.000 0.000 8.2450939 -2.1590736 3.4259829 11.4857743 12.4158468 7.2046044 10.8002942 8.2741848 8.1470782 NA 10.9154927 10.9841289 2.9284840 -2.1590736 1.7479029 9.2397603 5.3248322 8.9044118 11.3303630 11.1520555 10.5638243 2.7952059 10.8699588 10.5919330 7.2860319 5.3248322 0.8410070 0.4259963 11.0981099 2.6483734 8.6982202 8.9244960 10.2968576 9.9070353 10.3030077 4.5689381 10.5240114 4.1078050 7.6896395 12.8976121 7.4667258 9.7240417 -0.5741111 7.1217873 7.9244960 4.1629431 3.5959094 -0.1589125 7.5672351 2.8691410 7.5099017 12.0366196 6.7747080 9.5807973 11.3401152 10.7973929 6.1124791 11.7210785 13.1333743 9.1668844 4.8963009 5.6223769 10.9072741 0.4259963 0.4259963 1.9284651 4.0504669 11.761950 9.228496 8.765087 10.605474 11.026357 11.309895 6.364579 11.058369 9.581131 12.049022 13.278866 12.861736 9.198019 8.294288 6.176407 8.599240 10.068031 9.948888 10.860260 5.224719 13.628841 9.204604 7.550100 9.909459 8.504575 10.051874 7.983124 5.410874 11.908619 12.110655 -2.159074 9.768424 9.188638 9.797001 12.911599 9.665578 10.107511 7.921834 9.139079 9.421746 6.978008 9.695663 8.819727 10.203782 10.235479 11.512889 10.031150 11.715710 9.997416 9.273037 -1.159074 9.701844 5.907107 9.927153 6.860608 11.110290 4.949540 9.951826 7.877190 8.233796 15.883168 11.552469 11.026667 11.974159 11.426331 5.233336 1.648373 10.268068 8.732041 8.586691 TCGA-BH-A0BA 51 0 NA 1132 breast stage iiic t3 n3a m0 female 2006 NA yes mixed histology (please specify) 27 white NA 1 2 2 1 4 3 2 3 3 3 NA NA 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.733986e-07 24 20 0 16 40 10.5339617 10.3096225 11.6025077 9.7526332 7.9904189 8.7532064 10.2737259 9.5138121 9.7142984 13.8750381 9.6294453 10.7589245 0.4551233 12.9278346 6.0097323 8.7600656 5.5844274 8.4607684 9.6621580 13.0850126 -0.5447714 13.5191286 6.8517490 9.0241069 10.9369432 7.4381373 1.2624933 7.7629593 9.7054421 3.7770725 7.6839624 7.2753228 0.4551233 5.8038728 10.5571194 10.8918553 9.5232503 12.2538180 10.3721428 11.8282807 2.8474558 10.0039656 14.3211186 8.0521534 9.4565520 11.2131587 10.7609205 4.9145741 4.4093434 9.0504013 11.9881083 NA 10.8711495 5.6645966 6.1346235 3.6250717 10.5029493 11.6721927 10.1142477 11.6099618 12.6613187 6.6498999 10.3972916 10.4574137 11.3642868 11.1758155 5.4551431 11.6761266 10.9078998 1.0401209 9.7798868 9.1898535 4.4172314 5.6839631 10.2990648 9.7503387 9.8285527 10.4558480 3.0401034 10.2753227 12.7367840 12.5488089 9.8033186 9.2511834 1.022400 1.021800 0.041175 0.044715 -0.321000 0.418980 0.379730 -0.335140 0.361660 0.361660 0.361660 -0.361930 -0.337910 -0.343200 -0.232640 -0.344230 0.389820 0.389150 -0.328510 0.405270 -0.343660 -0.358060 -0.358060 -0.363940 0.324790 0.341120 0.341120 0.377430 -0.341710 -0.335030 -0.310140 0.080745 -0.397970 -0.323620 0.418980 0.418980 0.379730 -0.335140 0.409440 0.564360 0.307290 0.361660 0.400110 0.400110 0.400110 0.630800 -0.338370 -0.189860 -0.186600 -0.345270 -0.344230 -0.344230 0.374830 0.389150 0.909760 -0.328950 0.405270 0.405270 -0.343660 -0.147210 -0.365560 -0.358060 -0.328320 0.460070 0.341120 0.391470 0.044715 -0.341250 -0.150550 -0.338 -0.338 -0.344 -0.344 0.356 0.356 -0.329 0.405 -0.344 0.654 -0.338 -0.358 -0.358 -0.335 -0.335 0.341 0.341 -0.335 0.687 0.377 0.377 0.000 -0.329 -0.313 -0.313 0.000 0.000 -0.321 -0.321 0.419 0.419 0.380 0.045 0.334 0.334 0.362 0.362 0.400 0.400 0.000 0.000 -0.338 -0.338 -0.344 -0.344 0.356 0.356 -0.329 0.405 -0.344 0.654 -0.338 -0.358 -0.358 -0.335 -0.335 0.341 0.341 -0.335 0.687 0.377 0.377 0.000 -0.329 -0.313 -0.313 0.000 0.000 -0.321 -0.321 0.419 0.419 0.380 0.045 0.334 0.334 0.362 0.362 0.400 0.400 0.000 0.000 7.96491899 NA 5.53195842 10.11380154 10.84154516 6.37030554 11.64512268 9.31827684 8.71821331 5.88140767 11.94862395 12.22161881 3.88141012 2.62506003 3.40933662 7.93087687 2.26249329 10.10035182 11.35090831 11.06178025 9.64558567 4.06985681 8.13989255 9.65726753 7.54525642 10.47993715 -1.54498190 NA 11.09606645 6.54260630 7.30063352 7.86241172 7.33778690 9.67827671 10.51550195 4.21003033 8.76462018 0.04012092 7.90015857 12.02012677 7.57408485 7.59469484 NA 6.13462346 8.23486293 4.06985681 4.00973234 10.33625772 6.19661098 4.03468233 3.97870817 10.40095328 0.04012092 9.32704890 10.75521024 9.96788419 5.28803366 9.77876151 11.42848235 8.91047095 2.62506003 4.26250081 10.74112380 0.45512334 NA -1.54498190 2.36202095 11.245289 4.563671 8.491317 12.927835 10.107554 10.778480 13.085013 11.644351 8.749765 11.437246 13.278610 9.967884 9.050401 8.393253 1.262493 7.322422 11.831676 11.2062693 12.2048037 6.7219304 13.5587573 8.6923536 7.2721277 9.4042409 8.8323543 11.4506512 6.7266065 7.4295582 9.6294453 5.2624971 5.5531762 11.5641582 6.0550568 7.5322796 10.5744091 10.8716774 11.5493864 7.9629382 8.1999775 11.6424958 7.7006963 10.9542796 9.5232503 10.9809092 9.1425194 11.5799113 9.9639289 9.8719413 11.2538180 8.8772084 NA 9.8179807 8.0076782 11.9881083 8.0881389 10.8711495 5.3620350 10.4873686 10.5029493 7.6743123 13.0777081 9.8099441 10.7113524 12.0153571 10.8192784 0.7770304 3.2624933 10.3177810 11.0185783 10.3096225 TCGA-BH-A0BC 60 0 NA 974 breast stage iiic t2 n3 m0 female 2007 NA yes infiltrating ductal carcinoma 12 white NA 2 2 3 1 4 3 3 4 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.282743e-07 3.467973e-07 22.5806451612903 22.5806451612903 3.2258064516129 22.5806451612903 29.0322580645161 9.8051446 9.8633565 11.8080631 8.6731811 7.7761277 9.1380350 10.2817804 9.6822230 10.5481352 13.4335911 11.0462651 10.6146542 3.3597601 11.4305958 2.5202211 10.3370445 6.3860435 8.1503525 9.7716492 13.0810648 4.1302802 13.3883207 6.6473404 9.6285336 9.9640452 6.7480345 NA 11.5901297 10.3551161 0.8572644 8.1564720 8.0650919 NA 5.6985658 9.1511191 10.7142084 9.5047227 10.9803078 9.4239525 10.8345441 NA 11.3301242 15.4549288 7.8571139 10.5118972 10.8860912 9.9826776 3.5202336 4.9865475 9.0162946 11.9414082 0.5942619 11.3338416 6.3166961 6.5154759 6.2723013 10.6551958 11.7183511 9.9509018 12.5216374 12.6408081 8.1349391 10.8497305 10.4205812 11.5513318 11.0644819 4.1549477 12.3241903 10.6914719 -1.7278573 10.1534156 8.8961831 2.5985558 6.5343963 10.8343055 9.2140830 9.4701327 9.8577338 2.3597742 8.8759281 12.4557045 11.6765119 9.5823464 9.8153335 0.50533000 0.48837000 0.00291330 0.58739000 0.01321300 0.00069327 -0.00207840 -0.00207840 -0.02890100 -0.02890100 0.00833510 0.00360760 0.00360760 -0.00304750 2.14310000 2.96050000 0.00416320 -0.00221680 -0.59711000 0.58184000 0.00055459 -0.59039000 -0.59039000 0.73151000 -0.00027724 -0.00027724 -0.00027724 0.00000000 -0.00138580 -0.00138580 -0.00356580 -0.60960000 0.00097064 -0.61403000 0.00671720 0.04259000 -0.00207840 -0.00207840 -0.61008000 0.01419000 -0.00470790 -0.03803400 0.00138680 0.00138680 0.00138680 0.00138680 0.00360760 0.00360760 -0.59750000 -0.00304750 -0.59556000 -0.59556000 0.00416320 -0.00221680 -0.00221680 -0.59711000 0.00097064 0.00097064 0.00055459 -0.61738000 -0.59039000 -0.59039000 0.00416320 -0.00027724 -0.00027724 -0.01001000 0.01084200 0.00458000 0.00722170 0.000 0.000 0.000 0.000 0.000 0.000 -0.597 0.000 0.000 0.000 0.000 -0.590 -0.590 0.000 0.000 0.000 0.000 0.000 0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.597 0.000 0.000 0.000 0.000 -0.590 -0.590 0.000 0.000 0.000 0.000 0.000 0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.4829729 0.2722621 6.4472271 10.7319895 11.8031957 8.1034347 11.3653891 9.4747256 8.8705404 1.0796341 11.8117029 11.4375934 1.2723219 3.8572644 2.2722920 7.4092925 4.8421592 11.0373806 11.4904108 10.3367076 9.1640853 1.5942141 7.4195069 10.5545214 7.9605523 6.5059211 1.8572644 NA 10.5285104 7.8095199 6.3912436 8.9224560 6.4621260 10.4591526 10.3567779 3.5202336 9.0996445 NA 6.9233536 13.1737343 7.3029688 8.4397200 NA 6.0470890 8.2481496 3.7317372 5.6121519 -0.1427356 6.1971144 3.4015895 3.7958604 11.0838770 0.5942619 8.5565474 10.4099333 10.0078577 7.7378679 10.6397164 13.4762996 8.7561176 3.0796512 4.3166961 12.8397825 1.9727294 -1.7278573 -1.7278573 3.1302884 14.596546 5.529690 7.989978 11.430596 9.493889 10.822327 13.081065 11.784178 10.840020 10.563185 12.920435 9.899836 9.016295 9.387345 2.664619 7.388646 10.958364 11.040072 12.439014 7.715245 14.007275 8.943843 6.411853 8.582915 7.520229 10.372175 7.711094 8.933189 11.046265 7.881480 3.972739 11.091084 5.401586 7.600169 10.695155 9.998520 10.646798 7.154945 8.639717 12.123856 6.370333 10.377356 9.504723 10.979229 9.738888 10.227952 10.471054 10.962081 10.832396 8.630953 NA 8.811974 7.424257 11.941408 6.898010 11.333842 6.386044 10.709146 10.655196 7.322150 14.096390 10.608250 10.092880 12.199987 10.400618 3.316696 NA 10.518745 9.954857 8.618815 TCGA-BH-A0BD 47 0 NA 554 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma 2 white NA 1 2 3 NA NA NA 4 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 6.935946e-08 23.0769230769231 0 7.69230769230769 30.7692307692308 38.4615384615385 9.2075906 9.9260856 12.2692903 9.5224795 8.2669950 8.9031115 9.2484985 10.3778701 10.7580990 13.6915846 10.8044729 10.9553677 0.7093789 12.2143573 4.5371594 9.4602140 6.7449630 7.9947421 9.0545232 12.0243760 0.7093789 13.8633983 5.8712276 9.9011392 10.8339780 6.1818281 0.7093789 11.7578988 11.7402826 4.1422991 7.9891822 7.7383510 NA 4.5573366 9.6814579 10.9641321 10.1233906 12.3973277 9.1187306 11.5801667 6.1555954 10.0624866 15.1917569 8.9078337 9.2011928 11.6354874 11.5277621 5.2822285 6.2203009 9.0913150 11.6963194 -1.6126375 11.2988036 5.2075923 6.6635353 7.1085109 10.7289304 11.8690849 10.4447265 12.5179017 12.7462688 9.8961968 10.6213308 10.3372128 11.6123177 11.3861783 5.6190168 12.6007437 11.0949864 0.3873625 10.6252191 9.7267049 2.9765836 5.7624498 11.1435509 10.0856821 10.2531449 10.0882847 7.7093396 8.4668963 12.8960730 12.0320565 10.3233133 9.4722199 2.27550000 2.28290000 0.00458000 0.00458000 0.00583090 0.00041593 0.00708260 -0.68661000 0.62388000 0.62388000 0.62388000 0.00027728 0.00027728 -0.00512270 3.65690000 3.65690000 0.00194180 -0.00422040 -0.00069303 0.00000000 0.00402430 -0.01642900 -0.01642900 -0.01642900 -0.03245000 -0.03245000 -0.03245000 -0.01585100 -0.00373950 -0.68021000 -0.00083160 0.00458000 0.00583090 0.00583090 0.00041593 0.00041593 0.00708260 0.00527490 -0.69835000 -0.00124730 -0.00360110 0.62388000 -0.00027724 -0.00027724 -0.00027724 -0.00027724 0.00027728 0.00847430 -0.00512270 -0.69006000 -0.69568000 -0.69568000 0.00708260 -0.00422040 -0.00422040 -0.00069303 0.00000000 0.00000000 0.01474900 0.00541390 -0.01642900 -0.01642900 -0.68040000 -0.03245000 -0.03245000 -0.00304750 0.00652620 -0.00664320 -0.00401620 0.000 0.000 -0.674 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.674 -0.674 0.000 0.000 0.000 2.208 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.624 0.624 0.000 0.000 0.000 0.000 0.000 0.000 -0.674 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.674 -0.674 0.000 0.000 0.000 2.208 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.624 0.624 0.000 0.000 0.000 0.000 8.3181491 1.1947805 5.9873254 10.5589012 11.2416956 7.1713269 11.1420903 9.2935657 8.2474586 5.0878532 11.6733917 11.3883183 2.2943120 3.0312717 4.0598398 8.7025613 2.6353365 11.5899946 10.7280963 11.4974054 9.3114818 -0.6126375 8.0204066 10.0505250 7.0982185 7.8303548 1.7093348 -0.6126375 10.9510845 4.5166960 5.6447994 10.3513914 6.5063528 9.6044726 11.6560998 2.7093348 9.0185886 5.0167682 7.5698063 12.4534167 7.6089984 7.2577763 NA 0.9723986 8.9246299 0.3873625 3.2453892 -1.6126375 6.2011928 3.8527380 4.4318035 10.8078982 -0.6126375 7.8052641 10.2321174 10.1123517 4.7449630 10.3575175 13.8989172 8.4548458 3.2942973 4.1422991 10.2734892 0.9723986 NA 3.2942973 1.3874177 15.117518 7.158901 8.265463 12.214357 10.044730 11.563741 12.024376 12.014033 11.828691 10.834753 13.593816 10.599908 9.091315 9.315930 2.557337 6.875252 11.284690 11.37414247 12.23818447 7.77758081 15.45023606 8.58339873 6.73170732 8.68547417 9.39724015 10.03783066 7.23916028 4.97237559 10.80447293 7.54222941 -0.02767496 10.70623681 8.33139172 8.79115865 12.42898520 10.03261966 10.61953269 8.69915980 9.05806778 12.44447257 6.52183753 9.93363563 10.12339060 10.14396795 9.04294222 10.71972789 10.38459113 12.13298088 10.99958897 8.62462148 2.08783620 9.30669219 7.23406152 11.69631938 6.58708441 11.29880361 7.22976190 10.47154232 10.72893041 7.34741320 13.16615610 10.05939489 9.77327407 13.19677780 10.46355911 2.91098204 NA 11.67223571 10.31777935 9.53015679 TCGA-BH-A0BF 56 1 1324 NA breast stage iib t2 n1mi m0 female 2009 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 4 3 1 3 7 4 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 3.467973e-07 19.2307692307692 15.3846153846154 0 42.3076923076923 23.0769230769231 10.4084835 9.5881894 11.5980839 9.3216848 8.8271966 9.5449457 9.1106835 10.1086715 10.5809506 12.3363756 10.6848822 10.5787719 3.4818285 11.7385669 2.3242922 9.1581514 6.6953104 8.7582749 10.5787719 11.8178358 0.1092937 12.9341063 4.8526681 9.4622646 9.9786488 6.2237623 -1.3763204 11.3322815 9.7466766 2.8717845 8.2962738 7.3380937 NA 6.7987738 9.1217003 10.2586597 9.1405335 10.8753310 10.6852197 11.0667921 3.6238435 9.9463400 15.1150127 7.5594559 9.5874672 11.1479005 10.8502608 4.2088138 1.2088294 9.3329323 10.3978119 -0.3761331 11.0353596 6.4630518 8.0501131 6.1395493 10.8655339 11.7103166 10.0837924 11.8279611 12.9969856 8.0709318 11.1069086 10.3165251 11.2012774 10.8815310 5.2088099 11.9842842 11.4281813 0.6238669 10.5667295 9.1236944 3.9103585 6.7427891 11.1286676 10.6620817 10.7152840 9.7634000 3.7531338 7.4150116 13.4923818 12.4285846 10.0883943 9.5329917 0.628790 0.628790 0.105850 0.077142 -0.135490 0.111550 0.107890 0.540830 0.064368 0.064368 0.480790 0.071104 0.071104 0.098851 0.514030 0.104820 0.000000 0.000000 0.074696 -0.285600 0.273480 -0.335950 -0.324490 0.472970 0.035806 0.035806 0.034113 0.480960 -0.154480 -0.136000 0.031014 -0.311320 -0.135490 -0.145280 0.114330 -0.284180 -0.339870 -0.308740 -0.333010 -0.022332 -0.022332 0.064368 -0.333870 -0.695230 -0.304980 -0.166630 0.071104 0.111990 -0.352680 0.096234 0.104820 0.104820 0.000000 0.000000 0.000000 0.074696 -0.285600 -0.285600 -0.029857 -1.292900 -0.335950 -0.324490 -0.020412 -0.399750 0.034113 0.480960 0.027114 -0.304040 -0.325070 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.286 0.000 0.000 -0.318 -0.336 0.000 0.000 0.000 0.000 0.000 -0.154 0.629 0.481 0.481 0.000 -0.307 0.000 0.000 0.000 0.000 -0.135 -0.135 0.112 -0.173 0.000 0.000 0.000 0.000 0.000 0.000 -0.305 -0.305 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.286 0.000 0.000 -0.318 -0.336 0.000 0.000 0.000 0.000 0.000 -0.154 0.629 0.481 0.481 0.000 -0.307 0.000 0.000 0.000 0.000 -0.135 -0.135 0.112 -0.173 0.000 0.000 0.000 0.000 0.000 0.000 -0.305 -0.305 0.000 0.000 8.2568437 NA 5.2237623 10.5542163 12.2959423 6.6521408 10.0755749 10.1612709 8.7929845 5.0667910 12.3175533 12.1751278 3.7937711 1.9457950 4.8333000 8.5412205 5.0161665 12.3044278 11.6268393 10.7637196 8.8502606 6.0501142 8.1803548 10.3125360 8.5125919 5.8037566 2.2087982 NA 10.6029164 5.2677043 6.8037579 8.5156324 6.0667910 10.4573316 10.5254697 3.2088138 8.6764166 NA 7.4150116 12.0188471 8.8918056 7.6517542 NA 1.7937711 8.2495572 -1.3763204 3.8333050 NA 8.3155920 3.2682847 5.0332380 10.8717761 0.2087669 7.6434392 10.6757372 9.9491541 6.5003655 10.8691041 14.4571093 9.0688634 6.8717759 5.5307387 10.4109349 1.9457950 -1.3763204 -1.3763204 1.2088294 11.762698 6.238558 8.178437 11.738567 10.475598 10.631577 11.817836 10.550145 9.173633 10.919904 13.515015 11.429592 9.332932 10.355592 -1.376320 7.994536 11.280944 10.943803 11.580406 6.524716 13.343556 8.666876 7.892975 9.011866 7.665508 10.204861 8.758275 6.732374 10.684882 5.208810 2.945776 10.326021 5.689936 7.439264 12.681671 10.690610 10.346656 7.934461 8.285626 12.231757 9.197496 11.827158 9.140534 10.406028 10.113696 10.310787 9.667559 10.595392 10.717596 9.040646 8.797526 9.848013 7.758532 10.397812 9.488035 11.035360 8.921911 10.967312 10.865534 7.193704 13.391671 10.054301 10.690274 12.474524 10.590354 6.338095 2.027119 9.944649 9.623849 9.578772 TCGA-BH-A0BG 73 0 NA 1871 breast stage i t1 n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA NA NA 5 5 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 8.669932e-07 3.121176e-07 11.7647058823529 20.5882352941176 2.94117647058824 26.4705882352941 38.2352941176471 11.76991973 9.57445275 11.30683195 9.34550394 9.39280962 9.44708261 8.95214075 11.25341633 11.67798697 13.14091147 11.30701092 10.89423830 -1.66978582 12.06130179 2.13743795 9.67382969 6.98830067 8.75320471 12.93475788 4.45937260 NA 8.84282928 9.84628128 9.73161365 11.22376957 7.22187225 0.91502366 13.73758897 9.80986907 1.33009942 8.18339818 7.53221253 0.91502366 3.18806854 9.18027569 10.48617193 9.68213222 9.19582199 9.71271287 10.40590219 0.33009942 6.76471770 15.23897396 6.74502753 10.15703449 11.61520201 11.11288235 4.05801338 -0.67001535 9.21273177 10.28210198 -0.08497634 10.92534629 6.96671308 7.31022831 6.85365139 10.50189111 11.91810070 10.17753776 11.58791859 12.79852196 8.18495714 10.87094338 10.32267314 11.56983653 11.37772401 4.89994415 11.96739297 9.06902542 1.33009942 11.06860337 9.68983832 2.79279290 5.53954348 9.10898725 10.25675546 10.63814336 10.03399240 5.53954348 4.57801485 12.49601647 13.51817537 9.77975333 9.82394436 0.522750 0.521530 -0.428440 -0.034631 0.546470 -0.143470 0.355120 0.314020 -0.444690 -0.444690 2.346300 0.720180 -0.043554 0.404110 0.262160 0.262160 0.649650 0.364110 -0.017391 -0.435720 0.340960 0.070298 0.070298 1.221900 -0.367930 0.326400 0.326400 -0.068797 -0.032996 -0.032996 0.328660 -0.428440 0.567560 0.000000 -0.449330 -0.449330 0.355120 0.314020 -0.478920 -0.439730 -0.467060 -0.444690 0.311610 -1.259700 0.255340 -0.448890 -0.043554 -0.042110 0.404110 0.262160 -0.450400 -0.450400 0.649650 -0.046583 -0.046583 -0.017391 -0.317000 -0.317000 0.361330 0.500470 0.186310 0.070298 -0.450610 -0.367930 0.326400 -0.472050 -0.042924 0.242800 0.152610 0.720 0.000 0.404 0.404 0.650 0.000 0.000 -0.317 0.341 0.365 0.365 0.116 0.000 1.760 -0.451 -0.042 0.326 0.000 0.522 0.320 0.000 -0.412 0.185 0.329 0.329 -0.394 0.000 -0.406 0.000 -0.339 -0.339 0.355 0.355 -0.440 -0.440 -0.140 0.305 0.255 0.255 0.000 0.000 0.720 0.000 0.404 0.404 0.650 0.000 0.000 -0.317 0.341 0.365 0.365 0.116 0.000 1.760 -0.451 -0.042 0.326 0.000 0.522 0.320 0.000 -0.412 0.185 0.329 0.329 -0.394 0.000 -0.406 0.000 -0.339 -0.339 0.355 0.355 -0.440 -0.440 -0.140 0.305 0.255 0.255 0.000 0.000 8.53832320 NA 4.13744614 10.81616960 12.06627934 6.98680000 10.74133501 9.51762038 8.68025437 0.65205047 12.15395359 11.36601856 5.42812229 -0.67001535 4.13744614 9.14547214 4.21273274 12.33623956 11.54774367 10.61924316 9.35592057 2.13743795 8.89233122 10.59804589 7.57801636 5.86146909 1.33009942 NA 12.10970560 3.13743795 7.32161067 8.82594395 5.30737023 9.71203736 10.59658262 4.70512641 9.42020131 -0.08497634 8.34271340 13.33457267 7.32444250 7.19117571 -0.08497634 -0.08497634 8.54440811 2.65202751 2.23698236 0.65205047 7.49248053 4.43945027 5.39617662 9.95853445 4.68764303 10.60242700 10.66910368 10.17557887 5.37448310 9.51744086 14.66324419 7.89233152 5.33008866 4.77303104 9.69203255 2.23698236 5.41755213 2.03051265 7.94663788 13.035666 6.948475 8.803795 12.061302 10.310228 10.830184 4.459373 11.458083 9.168213 11.194855 13.484986 12.450084 9.212732 7.608538 3.330085 7.898045 10.456471 10.231710 11.381298 5.837883 14.574376 8.965807 7.924413 9.228690 8.389433 9.911595 7.692032 5.459373 11.307011 4.374483 3.944802 10.514034 4.111449 8.597765 13.621008 11.263411 10.689289 8.425486 8.923480 8.764717 7.278456 10.688866 9.682132 10.268933 9.936494 11.564008 10.360411 11.476658 10.097446 8.789521 NA 8.742299 6.436730 10.282102 7.674385 10.925346 5.922545 10.069447 10.501891 7.439710 14.683477 10.616935 10.704585 13.598740 10.467400 6.078281 2.330099 10.570880 9.854141 8.947556 TCGA-BH-A0BJ 41 0 NA 660 breast stage iib t2 n1a m0 female 2008 NA yes infiltrating ductal carcinoma 2 white NA 2 2 2 5 4 3 3 3 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.040392e-07 0 33.3333333333333 0 26.6666666666667 40 10.0269476 10.3444053 11.8832689 9.6337311 8.2348854 8.8945929 10.2557730 10.0852660 10.2288619 14.2073321 10.5304687 10.8340900 0.1055440 12.9996624 2.6905735 10.6499231 6.3150553 7.8267016 9.5014937 12.6312050 0.1055440 13.7500222 5.1788501 9.6372309 10.4755634 5.8604911 -1.4795526 9.9764809 10.9384926 4.0442017 7.2954273 7.5595591 0.1055440 5.4395035 10.1721403 10.1293570 10.0631884 11.8614638 7.7780278 10.9508312 -0.4793515 10.8986640 14.9751000 7.9205589 10.0885961 11.5211683 11.3994574 4.1353461 4.4513760 9.1725888 12.6036207 -1.4795526 11.0375712 8.3708269 6.7733054 5.1788501 9.8181296 11.6927550 10.6601914 12.2976899 12.5616147 8.8891465 10.9782774 10.7870929 11.1694470 11.0781038 5.1930660 11.5732081 10.1841982 NA 10.4233920 8.9140305 3.6544470 5.4154578 10.8132493 9.6861752 9.8425681 9.6652983 1.3279747 8.3986911 12.4591170 11.7379920 9.9188494 9.4813662 0.8404100 0.8404100 -0.1671400 -0.1671400 -0.2813200 0.3236600 -0.0182160 -0.2940200 0.0144700 0.0144700 0.0144700 -0.1179600 -0.2856600 0.3028200 0.3028200 0.3028200 -0.0033243 -0.0033243 -0.2944900 -0.2935500 -0.0095426 0.0234260 0.0234260 -0.0221950 0.2370500 0.2370500 0.2370500 0.0013868 -0.0349040 -0.1087500 0.0084743 -0.1671400 -0.3073000 -0.2950300 0.3236600 0.3236600 -0.0182160 -0.2940200 -0.2940200 0.3206000 -0.3226300 0.0144700 0.0020805 0.0020805 0.0020805 0.0020805 -0.2856600 -0.2856600 0.3028200 0.3028200 0.3028200 0.3028200 -0.0033243 -0.0033243 -0.0033243 -0.2944900 -0.2935500 -0.2935500 -0.0095426 0.0109820 0.0234260 0.0234260 0.0202030 0.2370500 0.2370500 0.0013868 0.0000000 -0.3389400 -0.3389400 -0.286 -0.286 0.303 0.303 0.000 0.000 -0.294 -0.294 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.237 0.237 -0.109 0.732 0.000 0.000 0.000 -0.339 0.000 0.000 -0.167 -0.167 -0.281 -0.281 0.324 0.324 0.000 -0.276 0.321 0.321 0.000 0.000 0.000 0.000 0.000 0.000 -0.286 -0.286 0.303 0.303 0.000 0.000 -0.294 -0.294 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.237 0.237 -0.109 0.732 0.000 0.000 0.000 -0.339 0.000 0.000 -0.167 -0.167 -0.281 -0.281 0.324 0.324 0.000 -0.276 0.321 0.321 0.000 0.000 0.000 0.000 0.000 0.000 8.6792496 NA 6.6805114 9.7276543 11.2143448 7.3177500 11.2256244 9.1932422 9.3456385 4.1930620 11.0167449 10.8568342 2.9129564 4.0752331 2.7685655 8.6703872 3.6905624 9.8951363 11.7973461 10.8828579 9.1930655 2.6905735 7.7874266 9.9526599 7.2210796 6.8825844 0.5206485 -1.4795526 11.3152590 5.8693681 6.8737874 8.3551110 6.1788521 9.5940653 10.7233761 3.4275257 8.3629906 NA 8.6252387 12.7475790 7.5540631 7.8693681 NA 2.1056110 8.7264334 3.2210728 4.8060404 -1.4795526 5.8693681 4.0482711 3.5650366 10.2353149 1.3279747 8.8726835 10.4565418 9.8357896 4.7874272 10.0699434 12.0152457 8.6147179 2.8425766 3.4748384 11.7986539 2.6080995 -1.4795526 2.1056110 1.8425766 13.249409 5.554064 7.893505 12.999662 9.582410 11.722764 12.631205 12.476925 9.512162 10.880115 13.528894 9.722151 9.172589 9.472653 0.105544 6.921520 11.736931 11.1868641 11.5398833 8.0244660 14.6295310 8.9882456 6.2821914 8.6473444 8.4921837 10.3637013 6.9300312 9.2855116 10.5304687 6.7104648 5.8244216 10.4889468 4.6703872 7.5875098 11.2987172 10.2245437 10.2838525 7.7153972 8.9043444 13.8054642 6.4979205 10.4205219 10.0631884 10.2197788 9.8627147 11.2652637 10.1140312 10.3207311 10.9337390 9.9284389 NA 9.5924711 7.2417391 12.6036207 6.9963741 11.0375712 7.1859755 10.3243676 9.8181296 7.1169417 13.8335542 10.5224001 10.8241354 12.9259810 10.5014937 0.8425364 NA 11.3176936 10.0694620 9.3118030 TCGA-BH-A0BL 35 0 NA 2278 breast stage i t1c n0 m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 3 4 NA NA NA 5 5 4 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.28315e-06 2.427581e-07 23.9130434782609 4.34782608695652 10.8695652173913 28.2608695652174 32.6086956521739 10.3713892 9.8920408 11.5697954 9.4524898 7.9076478 9.2354078 9.6089299 11.0769637 10.4047667 13.4093689 10.6097720 10.7607083 4.5673386 11.7809126 3.1888282 10.3497092 6.8479931 9.3753564 8.4304153 6.1523031 1.7413591 10.6509908 9.5534018 9.0818192 10.5914151 4.5298647 -0.7180941 12.0111346 11.0158015 3.6742572 8.1461247 8.9789063 5.1399197 4.7413699 10.9499373 10.2314007 9.6629409 10.4674337 10.0637083 11.7955430 5.1888282 7.0468108 15.3885323 8.2954847 8.4099331 11.3329777 11.1792170 5.7657548 1.0892947 9.9957549 12.1577840 -1.7178568 10.4846748 5.7413699 7.3904631 6.4008794 9.7388065 11.8646688 10.0596050 12.0545626 12.9066200 7.3126062 11.0530155 10.6645168 11.3574179 11.0698413 4.3694037 11.8500136 9.2599341 -1.7178568 10.8254540 9.2769993 4.3158053 5.7165657 11.3560802 10.4559281 9.8998653 10.0250901 1.9823639 8.2791184 12.9570688 13.0642715 10.5916992 10.2394035 1.185900 1.097700 0.374950 0.314980 -0.181160 0.276310 0.832740 0.194510 -0.168660 -0.168660 0.478380 0.965760 0.365100 -0.135360 -0.135360 -0.135360 0.916220 -0.205730 -0.083333 0.229010 -0.181690 -0.055672 -0.055672 -0.055672 -0.049019 0.127560 0.223450 0.399780 -0.050911 -0.117210 -0.180050 -0.233120 -0.251040 0.306010 -0.233200 -0.170060 0.832740 0.194510 0.194360 -0.133030 0.808700 -0.256690 -0.144120 -0.144120 -0.144120 -0.161410 -0.192870 0.371170 -0.135360 -0.135360 -0.142690 -0.180850 0.314340 -0.205730 -0.205730 -0.216510 -0.164850 -0.327390 0.320950 0.413960 -0.055672 -0.055672 0.261690 -0.165190 0.127560 0.718100 0.311670 -0.145020 -0.163960 0.347 0.347 -0.135 -0.135 0.314 0.109 0.000 0.225 -0.182 0.405 0.405 0.000 0.000 0.604 0.604 0.000 0.128 0.436 0.436 0.663 -0.212 0.312 -0.164 0.000 0.192 0.315 0.315 -0.181 -0.181 0.276 0.276 0.195 0.195 0.203 0.336 -0.169 0.257 -0.161 -0.161 0.000 0.000 0.347 0.347 -0.135 -0.135 0.314 0.109 0.000 0.225 -0.182 0.405 0.405 0.000 0.000 0.604 0.604 0.000 0.128 0.436 0.436 0.663 -0.212 0.312 -0.164 0.000 0.192 0.315 0.315 -0.181 -0.181 0.276 0.276 0.195 0.195 0.203 0.336 -0.169 0.257 -0.161 -0.161 0.000 0.000 8.0649367 NA 7.1336878 10.3574178 11.1720130 6.1499584 10.5951052 10.7082559 8.0792922 2.9257906 11.7967760 11.1291586 2.1888440 3.3693967 5.1645812 8.8479928 3.9543638 11.6730480 10.9749900 11.1250746 8.6383907 3.0368198 8.5936869 9.7464844 8.1399197 9.6661828 5.7897345 3.8668981 10.7248822 3.2819356 7.8706532 8.0468102 8.0149539 10.3542355 11.0929120 5.6569768 9.1828055 5.0892947 9.1045096 11.8949224 8.3208578 7.9944655 1.2819653 6.9293969 7.9293969 1.8669080 1.6038815 -1.7178568 7.0796000 4.0898117 5.0368242 10.7279882 5.5673416 11.1412794 10.1484449 9.8152685 6.1645812 10.5062419 13.9525950 8.9338874 5.7897345 4.5298647 10.7690250 2.2819356 -1.7178568 0.2819059 4.2361329 11.227931 8.556899 8.395681 11.780913 10.134078 10.766006 6.152303 10.395355 8.890193 11.875190 13.928751 10.590562 9.995755 8.458112 1.603881 7.353401 10.946386 11.4463743 11.1888293 5.6306676 13.5442516 8.7321189 8.1645817 9.2324946 8.7238456 10.4388024 7.7717866 7.4468459 10.6097720 9.6139752 0.8668684 10.7269535 9.2193125 9.2648681 13.1418617 10.6523537 10.3868650 7.8650218 8.5369671 10.4671239 7.8631393 10.8244144 9.6629409 10.1266445 9.3473549 12.2048947 11.0259316 11.0870780 10.4637122 9.1021177 2.1888440 9.3158298 7.9003240 12.1577840 8.2987472 10.4846748 8.4099331 10.3338919 9.7388065 7.4889528 13.2586818 10.0534282 10.3115710 12.7458462 11.3053465 7.2620779 3.6394869 10.3871926 9.9784717 9.5089529 TCGA-BH-A0BM 54 0 NA 1876 breast stage iib t2 n1a m0 female 2007 NA no infiltrating ductal carcinoma 3 white NA 2 2 3 1 4 3 3 3 5 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 3.121176e-07 19.047619047619 19.047619047619 4.76190476190476 28.5714285714286 28.5714285714286 10.6317447 9.2636206 11.0609024 8.5266549 8.2829262 8.8127597 10.1970759 10.0548679 10.6552972 13.1611118 11.2829261 10.5359688 -0.6508612 12.7027958 3.6711688 9.9703715 7.0771554 9.0686243 11.0604722 13.1096435 -0.6508612 13.9596836 6.7754997 9.5216629 10.4024826 9.3881544 NA 8.8688716 8.0565944 3.3492379 8.6346376 7.6392546 NA 3.9930946 9.0737493 11.3926045 8.7415529 11.2733056 9.2196001 10.9667029 7.2740482 10.1240225 14.6182890 7.3517688 10.0974283 10.6369478 11.0176773 5.2318778 4.2561275 8.9285512 12.2666075 1.3492520 11.4502262 5.3492343 5.1305932 4.2561275 10.1541731 12.0459857 10.3329416 12.3028863 12.5921118 8.0002874 11.0570259 10.8644720 11.0852145 10.8752455 4.1565908 12.0315717 11.0928076 NA 10.3428815 8.6507315 3.9942448 3.8086631 10.0101227 9.9152895 9.7796880 9.7166502 3.8727992 9.5562497 13.2492531 13.3316052 9.3520505 9.6334812 0.62042000 0.64176000 0.00124810 0.00124810 0.00694350 0.00000000 -0.00124730 -0.64818000 0.00402430 0.00402430 -0.00512270 0.00332990 0.00332990 -0.00249380 -0.00249380 -0.00249380 -0.00346270 -0.00346270 0.00736090 0.00489040 0.00013863 -0.64800000 -0.00664320 -0.00664320 -0.00249380 -0.00249380 -0.00249380 -0.00083160 -0.00401620 -0.00263220 -0.00595220 0.00124810 0.00694350 0.00694350 0.00000000 0.00000000 -0.00124730 -0.64818000 -0.64818000 0.00285050 0.00624810 0.00402430 0.00360760 0.00360760 0.00360760 0.00360760 0.00332990 0.00332990 -0.00249380 -0.00249380 -0.00249380 -0.00249380 -0.00346270 -0.00346270 -0.00346270 -0.00055444 0.00489040 0.00489040 0.00013863 -0.69679000 -0.64800000 -0.00664320 -0.03776200 -0.00249380 -0.00249380 -0.00083160 0.00208050 0.00402430 0.00402430 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 -0.641 0.000 0.000 0.000 0.000 0.000 0.000 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.647 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 -0.641 0.000 0.000 0.000 0.000 0.000 0.000 0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.647 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.5216629 NA 6.3826586 10.5810566 11.3946538 7.6570740 11.4746489 9.1924499 9.1900133 0.9341768 12.2351224 10.8369850 2.5191644 5.8086682 3.4366949 7.9152896 3.1565908 10.4004444 11.5087914 10.4193564 9.7012789 6.4260517 8.1533666 10.0565946 6.4681760 9.5291445 -0.6508612 NA 10.9621040 7.1501352 7.4785181 7.6890853 7.2976023 10.0657549 10.3743750 5.8410875 7.4419930 NA 8.4707691 13.4242131 8.5586889 8.4153247 NA 2.9341957 8.5341106 NA 5.9785915 NA 5.2561275 4.4367015 3.5971617 9.9360752 -0.6508612 8.8530612 10.4159973 9.5720303 5.4785189 10.0677683 11.1860748 7.6160217 2.9341957 2.9341957 10.8879094 2.1565908 -0.6508612 NA 3.8727992 12.429798 3.808663 8.884511 12.702796 10.423377 11.069052 13.109644 11.563858 8.909568 10.040979 13.235504 10.584651 8.928551 8.991287 NA 7.426051 11.072043 10.702382 12.053355 5.279973 14.359806 9.009231 6.244054 9.124023 6.857030 10.238998 6.130595 6.841089 11.282926 7.483662 5.207217 10.635216 6.926665 5.738803 11.137138 10.282926 10.615436 8.320779 9.188439 10.592409 6.035736 11.136252 8.741553 10.915765 10.036611 10.715558 9.717742 9.632324 10.404518 8.366044 NA 8.705093 8.438368 12.266608 6.724275 11.450226 6.231878 10.301249 10.154173 6.949149 14.938857 10.405196 11.596570 12.525253 10.151752 3.934196 0.349252 10.707337 9.750115 9.512885 TCGA-BH-A0BO 54 0 NA 2197 breast stage i t1b n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 3 NA 4 3 3 3 4 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 21.0526315789474 15.7894736842105 0 21.0526315789474 42.1052631578947 11.25125859 9.68349856 11.51819746 9.58624120 7.83948600 9.10677753 10.40037462 10.26903092 11.37430372 13.02686988 9.79322044 10.38573484 3.58746101 12.63877933 2.90157169 11.15011511 6.15936681 8.95920736 10.01236405 11.61790361 0.96295614 11.52759512 6.95165423 9.43155255 10.17971518 7.35528678 -1.62193235 11.76696310 9.59475268 2.77032164 9.30133431 9.25529088 -0.03696985 5.48653097 9.76925040 10.76090096 10.75738518 11.78620382 9.27206659 11.64523236 2.37801214 9.66860173 15.30193773 9.22490754 10.03576740 11.46314725 11.16815160 5.10592527 1.18535913 9.25221978 11.81133138 NA 11.16509310 7.72008142 6.60682565 4.37800520 10.31795318 11.57184008 9.99639228 13.40794099 12.93331487 7.74869402 10.73363312 10.64015445 11.17059372 11.71311793 4.99271859 11.49986402 12.20395931 -1.62193235 10.76844447 9.57951809 3.87017728 6.34379154 10.43328915 10.02050984 11.13456307 9.81367699 2.69992914 8.42921590 14.20025393 13.91404145 9.36455996 8.74869402 0.00624810 0.27695000 -0.00041585 -0.00041585 -0.00290910 -0.00027724 0.00444110 -0.06370000 0.00000000 0.00000000 0.00000000 0.00249690 0.00208050 -0.00035595 -0.00035595 -0.00035595 0.00013863 0.00013863 -0.00069303 0.00208050 0.00000000 0.00027728 0.00027728 0.00027728 0.00263570 0.00263570 0.00263570 0.00430210 0.00624810 0.00624810 0.00694350 -0.00041585 -0.00290910 -0.00290910 -0.00027724 -0.00027724 0.00444110 -0.06370000 -0.27698000 -0.00041585 -0.00041585 0.00000000 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00499690 -0.00035595 -0.00035595 -0.00035595 0.00013863 0.00013863 0.00013863 -0.00069303 0.00208050 0.00208050 0.00332990 -0.19450000 0.00027728 0.00027728 0.00360760 0.00263570 0.00263570 0.00430210 0.00430210 0.00541390 0.00541390 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.194 -0.194 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.194 -0.194 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1997808 NA 6.9741966 10.3927247 10.4969478 7.0774406 11.5460520 11.5512341 8.7423603 4.8537412 13.3361063 10.6696840 2.6999291 4.9325951 4.0218617 8.3524213 2.7703216 11.1523820 11.6901807 11.2535642 8.9325957 4.6634072 7.9573226 10.0896737 6.9890311 9.3365594 4.2848990 NA 12.1613120 7.8537400 7.8167987 7.7377564 6.9629689 9.8787739 10.1008144 4.7703216 7.6863457 NA 9.0486631 12.5927053 8.3131719 7.6564563 0.3779566 2.2848990 7.8738618 1.1853591 5.9015693 4.5277522 4.5678314 4.6492820 2.0784391 9.6032142 0.6999069 9.9871856 10.5245754 9.8245731 6.3322031 10.2367649 11.6051714 9.3545709 1.5479433 4.2108953 11.0301795 NA -0.6219324 1.3780121 1.5479433 12.416685 4.132898 7.940249 12.638779 9.807644 10.415211 11.617904 12.327925 8.756302 10.680074 14.462857 13.153720 9.252220 8.507290 -1.621932 7.514998 11.488653 12.08407104 11.88505808 7.60441905 14.43838500 9.95920736 5.27282571 8.49954018 7.72008142 9.58181350 6.39481421 7.46811896 9.79322044 5.94786249 3.83743871 11.76332994 5.05043204 5.15384586 11.98499023 10.48914239 10.42376639 8.34090270 8.56906609 13.02270804 7.25758962 12.40381335 10.75738518 10.30393209 9.14204909 11.06647565 10.53503786 10.77755172 10.37589187 9.51307478 NA 9.39074312 9.31558661 11.81133138 7.63067193 11.16509310 6.64010174 12.38547299 10.31795318 7.63775006 13.85015815 10.00645232 10.36775600 13.69120868 10.01327144 1.37801214 -0.03696985 10.46944219 10.30874413 9.57091598 TCGA-BH-A0BP 76 1 2296 NA breast stage i t1c n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 4 NA 4 3 6 4 5 2 4 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.329254e-06 9.363527e-07 19.2 35.2 2.4 28.8 14.4 9.947582005 9.602387098 11.364632999 9.759222093 8.637329846 9.066380661 10.029474144 9.399868769 11.256704345 13.429091386 9.170497708 10.502186474 2.911231380 11.616511995 4.396652728 10.503183834 6.317217226 8.189209800 9.550264267 12.491797817 -0.995678394 12.550505595 5.970119699 9.047320803 11.057921143 10.148992809 1.326249701 7.896118027 10.430599323 4.396652728 7.834057618 7.492174461 -0.995678394 4.676758229 9.681173217 9.290892266 9.007149519 11.354445053 10.713849237 11.356653944 NA 11.448314107 15.122221151 8.967924233 10.560840650 10.570388643 10.207682541 5.174258594 4.811691939 9.435832125 11.844325663 0.004321606 11.086816335 5.704775155 4.619043192 5.194157987 9.762557776 11.443386290 9.793868253 12.640052700 12.769931500 7.856083723 10.600990278 10.558870672 11.165781453 11.148992809 4.289738577 12.096596210 10.503183834 1.326249701 10.890793295 9.071768836 2.053980168 5.112858570 10.033621771 10.274045660 10.629586850 10.264666142 4.589296093 9.442086745 12.427450507 12.012062714 9.285105326 9.938762582 0.1197600 0.5987200 0.0675180 0.0718220 -0.3261200 1.1057000 0.4337800 0.0346770 0.0294660 0.0294660 0.7543300 0.2526100 0.0968160 2.1085000 0.0000000 -0.0850590 -0.1253800 2.4469000 -0.3131900 -0.3297100 2.9895000 -0.3371000 -0.7888200 0.2906600 -0.0974950 0.0794470 0.7698300 0.5232800 -0.3861600 0.0294190 0.0529520 0.0675180 1.5482000 -0.3739200 -0.3364100 -0.3293600 0.5128100 -0.7392300 -0.7788000 0.4880200 0.2669800 -0.3552100 0.0696690 -0.3246100 -0.3498500 0.0274410 0.0685830 -0.3317900 -0.3437700 0.0000000 -0.7210100 -0.7338900 -0.7510600 -0.1050000 -0.1568900 -0.3347500 -0.3297100 0.1057000 -0.3461800 -0.3454200 -0.7703100 -0.7888200 -0.3264600 -0.8442700 -0.5270600 -0.1894900 0.4585800 0.0043021 0.0043021 0.000 0.000 -0.315 -0.315 -0.751 -0.157 -0.313 0.106 0.468 0.659 -0.332 -0.412 -0.412 -0.348 -0.348 0.000 0.000 0.000 0.000 0.086 0.523 -0.340 0.000 0.000 0.000 0.000 0.000 -0.326 -0.326 0.081 -0.336 -0.315 -0.315 0.452 0.267 -0.355 0.754 -0.325 0.000 0.000 0.000 0.000 0.000 -0.315 -0.315 -0.751 -0.157 -0.313 0.106 0.468 0.659 -0.332 -0.412 -0.412 -0.348 -0.348 0.000 0.000 0.000 0.000 0.086 0.523 -0.340 0.000 0.000 0.000 0.000 0.000 -0.326 -0.326 0.081 -0.336 -0.315 -0.315 0.452 0.267 -0.355 0.754 -0.325 0.000 0.000 0.000 8.4617156 3.2522643 6.8245133 10.5086570 11.4599187 7.7539361 11.0511176 10.4543292 8.1414537 2.5893081 11.2845254 11.5747714 4.9816152 5.6336898 4.7592198 7.5200348 3.7592198 10.2943534 11.7252201 10.2391520 8.7758239 6.3966527 7.5081600 9.8427507 6.1232751 10.2427393 3.1742626 NA 10.6718897 7.4137252 7.5357163 7.7658861 6.8435380 10.5753903 10.0838194 5.8746986 8.9006670 NA 8.0514586 12.6183542 8.2687773 8.2331532 -0.9956784 2.0043216 7.9986880 4.8116919 5.6042463 NA 4.0043306 4.1401979 2.5893081 10.8092722 1.0043216 8.6445795 10.5722907 9.7262882 5.5278961 9.8364334 11.9887531 8.3058306 2.0043216 3.5892961 10.8209183 0.5892841 -0.9956784 2.3262497 3.9585272 12.106098553 5.213786634 8.240348679 11.616511995 9.515098787 10.761724578 12.491797817 14.885305117 8.754204064 10.364633054 12.742954673 10.804830091 9.435832125 7.593048944 0.004321606 6.929147132 11.332448480 11.395310 12.620309 6.905202 13.785743 9.018355 5.463766 8.824514 6.886978 10.655122 6.123275 8.379374 9.170498 6.975878 NA 10.499190 6.998689 6.400425 11.344741 10.986972 10.682054 7.955619 8.606105 11.211959 4.886979 11.286908 9.007150 10.039134 9.576087 10.337490 10.593049 10.537178 10.762141 8.502187 2.463753 8.951738 7.792237 11.844326 5.004335 11.086816 7.558923 10.943399 9.762558 7.266899 13.812897 10.018355 9.876240 12.246616 9.888505 2.004322 NA 10.134905 10.091134 9.707373 TCGA-BH-A0BQ 39 0 NA 2255 breast stage i t1c n0 m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 3 NA 4 3 4 4 5 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.080784e-07 35 10 5 45 5 9.980578 9.251366 11.583422 8.920018 8.614673 9.416127 9.967189 9.611233 11.028744 12.526022 11.006008 10.277095 4.681787 13.481098 3.600864 10.868014 7.651971 8.090252 11.063133 12.581995 1.485375 13.919366 5.900427 9.433387 10.217840 8.871971 -1.099433 9.597395 9.548785 2.359858 9.120806 7.704558 NA 4.600864 9.551479 10.264562 9.381217 11.279264 9.324593 10.451655 9.543381 10.906052 15.388424 8.002297 10.157225 10.467908 10.905350 4.987889 4.515138 8.734898 11.570862 NA 11.306100 6.825240 5.854624 4.707784 9.971889 11.774256 10.742777 12.704255 12.539542 8.853168 11.089016 10.502198 10.887691 10.638519 4.572853 12.003387 10.860429 -1.099433 10.458848 8.896194 3.432118 5.544284 10.740025 9.971889 9.836329 8.994505 3.544288 10.502198 13.674854 12.857166 10.046996 9.855350 0.78929000 0.78929000 -0.00206270 0.00221930 0.00583090 0.03881200 -0.00553750 -0.41091000 -0.00097017 -0.00097017 -0.00097017 -0.00069303 -0.00356980 -0.00041585 -0.00041585 -0.00041585 -0.00346270 -0.00346270 0.00416320 0.00166420 -0.00401620 0.01056400 -0.00678130 -0.00678130 -0.00719580 -0.00719580 -0.00719580 -0.00456950 -0.01880600 -0.00027724 0.00035545 -0.00206270 0.00221930 0.00583090 0.03881200 0.03881200 -0.00553750 -0.41091000 -0.43550000 0.00180300 0.00180300 0.00221930 0.00166420 0.00166420 0.00166420 -0.01208000 -0.00356980 0.00458000 -0.00041585 -0.00041585 -0.00041585 -0.00041585 -0.00346270 -0.00346270 -0.00346270 0.00416320 0.00166420 0.00166420 -0.00401620 -0.41597000 -0.42669000 -0.00678130 0.06952500 -0.00719580 -0.00719580 -0.00456950 0.00458000 -0.03108600 -0.03108600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.396 -0.416 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.789 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.396 -0.416 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.789 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.2905958 NA 5.9665158 10.9661797 11.7948659 7.2258225 11.4612375 9.1670028 8.8207799 3.6008644 12.0290659 11.3848648 2.6008644 2.2223409 2.9004321 7.7045580 3.9448210 11.3495757 11.3708317 10.6021667 9.4750206 6.0902522 7.5334224 10.2441679 7.1098808 5.5586381 -1.0994326 -1.0994326 10.8777070 4.5442814 7.4740742 8.0927196 7.3721024 10.4120414 10.5956554 3.6553175 8.9584187 1.7077898 8.4816275 13.4177274 6.4318085 8.1904460 NA NA 8.6418939 3.4853882 5.6686127 0.4854268 5.6146716 4.5442814 4.2223564 10.8046853 1.4853753 9.6768601 10.4545362 9.8841333 5.3433723 9.5921705 12.7338113 8.6735663 3.0703550 4.4550181 11.5902067 -0.0995872 -0.0995872 1.2223718 3.4239949 12.760738 5.423988 8.759962 13.481098 10.332969 11.182067 12.581995 11.996977 9.393282 10.555510 13.506254 11.489142 8.734898 9.426926 1.485375 6.586927 10.846968 11.3180159 12.1502812 7.0089518 14.1910914 9.2776375 6.0193683 9.1459798 8.0703523 9.7871067 7.0141689 7.7109986 11.0060083 7.6317460 -1.0994326 10.3366180 8.9852354 6.2266761 12.3498337 10.4669568 10.5288726 8.4623452 8.6435784 11.8967240 5.6418928 9.3538418 9.3812172 10.3761605 10.0565101 10.0803361 10.1388317 10.3209137 10.5096058 9.0128667 -1.0994326 9.4793187 7.1731964 11.5708620 6.9227949 11.3061004 8.0501741 10.3967816 9.9718894 7.2223554 14.4659457 10.1037751 10.4942850 13.2227073 11.0277766 5.8891109 -0.0995872 9.5982634 10.2081970 9.0577741 TCGA-BH-A0BR 59 0 NA 2330 breast stage i t1c n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 1 NA 4 3 2 2 5 5 4 3 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 1.213791e-06 3.121176e-07 27.2727272727273 36.3636363636364 0 22.7272727272727 13.6363636363636 10.061600 9.855818 11.621824 9.995203 8.287465 9.718515 10.768355 10.339047 10.490907 14.596754 10.595053 10.741843 -0.220278 12.525344 3.867135 10.801344 4.027596 7.843065 9.112825 12.410165 NA 12.720718 4.802038 9.849872 9.699278 8.322702 -0.220278 8.786697 11.680348 3.101600 7.818589 8.585414 NA 5.271523 10.163374 10.575304 9.396219 10.030561 10.438774 11.237564 -1.220278 10.802038 15.265484 7.591623 9.527024 11.137497 10.753726 4.205932 5.768354 10.051133 12.285854 1.587029 11.331859 6.295370 6.326564 6.364632 9.735320 11.212212 10.319314 12.437770 12.664127 8.606219 10.890153 10.303952 10.950534 11.207507 4.612559 12.469341 9.075439 1.101583 10.681668 8.341912 2.588061 5.625159 10.654267 9.897313 9.759810 8.733866 2.587029 10.593451 12.931876 11.957712 9.952097 9.469668 0.0107030 0.0102850 -0.5301200 1.0851000 -0.5088100 3.6569000 0.0056919 0.0062481 -0.4923500 -0.4923500 -0.4923500 0.0063871 0.0237060 0.0081959 1.8817000 1.0757000 0.0324220 0.0324220 -0.5085700 0.0228650 0.4299100 -0.4017400 -0.4017400 -0.4017400 -0.0067813 3.6569000 0.0016642 0.0084743 0.0000000 0.0107030 -0.0095426 -0.5301200 -0.5325600 0.0040243 0.0087528 0.0087528 -0.0182160 -0.5141400 -0.0228810 0.0231450 0.0231450 -0.5241600 -0.5147600 -0.5147600 0.0147490 -0.0156040 0.0237060 0.0237060 -0.5246100 -0.0384420 -0.5214300 -0.5214300 0.0324220 -0.5021400 -0.0045695 -0.5085700 -0.5276700 0.0034687 0.0195030 0.0036076 -0.5312400 -0.4017400 0.4864700 -0.5209200 -0.5112500 -0.5274600 -0.5400700 -0.5298600 -0.5535400 0.000 0.000 0.000 0.000 0.000 0.000 -0.509 0.000 0.000 0.000 0.000 -0.531 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 -0.527 0.000 0.189 -0.530 0.000 0.000 0.078 0.605 -0.511 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 -0.492 -0.492 -0.515 0.000 0.154 -0.232 0.000 0.000 0.000 0.000 0.000 0.000 -0.509 0.000 0.000 0.000 0.000 -0.531 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 -0.527 0.000 0.189 -0.530 0.000 0.000 0.078 0.605 -0.511 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 -0.492 -0.492 -0.515 0.000 0.154 -0.232 7.6775153 5.2059359 5.5345566 11.1563381 11.3679162 6.2005573 11.4201409 10.0554919 8.2288187 3.5345597 12.9441056 12.0298056 3.6376566 -1.2202780 3.7338641 8.0834506 4.6376508 11.4567290 11.8199597 10.7122539 8.5577470 4.8881929 8.3188288 10.4994867 6.7683551 7.5143795 5.2391001 NA 10.8862330 3.1015997 7.1676871 9.2038364 4.9694959 10.5138335 10.0066843 2.3646285 7.8671329 -0.2202780 8.1762749 11.9665580 7.3533171 7.7133604 NA 4.9089522 7.0370582 2.4801100 4.6865622 NA 5.3943804 2.7796800 3.0275964 11.0045761 2.2390925 10.0563761 10.7247481 9.3627528 5.7569512 9.6407570 12.4172006 9.1805495 4.3342608 4.9495956 10.9137754 0.7796379 -1.2202780 2.5870289 1.1015828 11.595273 10.412211 8.253376 12.525344 9.822697 10.638428 12.410165 10.250329 10.404465 10.941432 12.892842 9.177345 10.051133 8.892110 -1.220278 7.180550 10.878689 11.7302259 13.3474479 5.8457585 14.1445553 9.1004705 5.7221846 8.4956320 8.2614697 10.7141791 6.6062186 7.9719631 10.5950533 8.9670222 3.8671354 10.9379642 5.3646320 7.7738823 12.0881513 10.2933976 11.0639158 6.9495956 8.4956320 10.6839283 4.9891254 10.5785063 9.3962188 9.9325886 9.9982333 11.0911346 11.0962344 10.8247471 10.7859961 9.0216532 8.0180750 9.2916993 8.8382030 12.2858536 4.2391001 11.3318588 8.6714537 10.5869324 9.7353199 7.6925597 13.6800180 10.3962189 9.6706943 13.0544122 10.6054239 0.3646845 0.3646845 10.3134864 10.5777368 9.0180747 TCGA-BH-A0BS 55 0 NA 2612 breast stage iiia t3 n1c m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 3 1 2 2 4 4 5 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 1.733986e-07 16.6666666666667 16.6666666666667 0 16.6666666666667 50 10.1908152 10.2259420 11.9300961 9.9818111 8.1832041 9.5211091 10.2697216 9.3041087 9.5686197 14.1541971 10.6101412 10.3129460 0.9576175 13.4259220 3.9575989 9.6300203 7.5500518 7.7323818 7.9079079 12.9389244 1.1799568 14.4022648 8.0056279 9.5833038 10.3722802 6.0019891 -1.6272707 7.7011955 11.0496914 -0.6272707 7.7606494 6.4170272 -1.6272707 4.9725456 9.9424881 10.6446790 10.7304594 12.1397824 10.5842166 11.5970864 1.1799568 11.5544059 14.5409716 9.4970640 9.5875587 12.1413337 11.3432777 3.0164963 7.5649253 9.1098797 11.9107001 NA 11.0626305 2.2795307 3.7301834 3.6205630 11.1556307 11.5315576 10.1539921 11.3111094 12.8781959 7.9079079 11.1047999 10.7473677 11.5078608 10.9224172 4.9272233 12.0021029 9.5306110 -1.6272707 9.8176472 8.7124826 1.6959938 4.0730747 10.4404030 10.1803898 9.4367015 9.5166532 2.8320596 10.3459711 12.1024656 11.1684692 10.1999752 9.0326285 0.64155000 0.64286000 -0.00152430 -0.00794560 -0.00055444 -0.00055444 -0.00249380 -0.00733390 -0.00027724 -0.00027724 -0.00027724 0.00277450 0.00277450 0.00249690 0.00249690 0.00249690 -0.00235530 -0.00235530 0.00013863 0.00555290 0.01000600 0.01014600 0.00680440 0.00680440 -0.00013862 -0.00013862 0.00208050 0.01363200 0.00305220 0.00305220 0.01056400 -0.00152430 -0.00055444 -0.00581400 -0.00055444 -0.00055444 -0.00249380 -0.00743030 -0.00733390 0.00000000 0.00000000 -0.00027724 0.00499690 0.00499690 0.00499690 0.00499690 0.00277450 0.00277450 0.00249690 0.00249690 0.00249690 0.00249690 -0.00235530 -0.00235530 -0.00235530 0.00013863 0.00555290 0.00555290 0.01000600 -0.71433000 0.01014600 0.00680440 0.00485790 -0.00013862 -0.00013862 0.01363200 -0.00066080 0.02749700 0.02193100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.676 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.676 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5723050 NA 4.9424864 9.4732948 11.6529683 7.2385203 11.3456123 8.0845405 8.7754845 -0.0424568 10.4136071 10.4931069 3.5820863 2.9575989 2.0730661 7.9137290 3.1799887 9.3085343 11.6227828 10.7122041 9.2674501 9.1767636 6.9195272 9.9146970 6.2118357 6.4600954 -1.6272707 NA 11.1428834 6.4967531 5.3499137 8.2855220 5.1539917 9.5037564 10.3800102 5.6764141 7.2944737 -0.6272707 7.2765143 12.8714817 7.1539917 8.2974450 -1.6272707 -0.6272707 8.4967539 1.1799568 3.8961943 -0.6272707 -0.0424568 6.2935213 0.3726178 9.9253016 -0.0424568 7.2243818 10.2659340 10.1212447 3.2795159 9.2298359 11.9226577 6.5624577 0.9576175 1.1799568 13.5966341 3.9575989 NA 4.1799887 -0.6272707 13.1774189 4.9117922 8.5550270 13.4259220 10.1486541 11.0937316 12.9389244 12.4733769 9.5249174 10.9997103 13.3015672 8.6026528 9.1098797 8.8051744 -0.6272707 6.5425568 11.0173901 10.8569519 12.0956534 8.7345762 14.5926888 9.0661193 2.8320596 8.4279149 8.6649542 10.1466536 4.4170288 7.6394189 10.6101412 5.1141005 0.6945682 11.2192981 4.8961943 6.7659802 10.1670484 9.5280833 10.5115441 7.8051744 8.6098425 13.3797912 1.3726178 8.8612457 10.7304594 10.3059543 9.8432914 11.3692825 8.8804272 10.8789400 10.8762098 10.3391379 NA 9.5126058 8.3899561 11.9107001 1.8320799 11.0626305 8.3180764 10.5309265 11.1556307 6.5624577 13.5944461 10.4521173 10.8991317 13.5077806 9.5655418 NA NA 10.6338459 10.7862604 9.1983864 TCGA-BH-A0BT 56 0 NA 2365 breast stage iia t1c n1mi m0 female 2007 NA yes infiltrating ductal carcinoma NA white not hispanic or latino 1 1 1 1 5 3 4 2 2 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 8.669932e-07 1.040392e-07 34.4827586206897 24.1379310344828 3.44827586206897 10.3448275862069 27.5862068965517 9.4813916 8.3159103 11.0727896 7.4213369 9.1160546 9.7211489 9.1329053 9.1669900 9.6533791 12.6515746 10.5315906 10.5323379 3.1407623 13.9333102 2.7046728 9.1397869 7.1368415 8.2483826 9.5531072 13.5315906 -0.8567372 13.4785832 6.4998491 10.7976120 11.2316853 8.9118264 -0.3827015 9.1378242 10.2812083 1.9391513 9.1717943 6.6284324 NA 2.3176514 9.0507909 10.1368417 10.0122040 9.8910011 8.7283413 10.8962357 11.5597200 11.1027832 14.0251371 5.7636984 9.1495614 11.3198111 10.6622825 4.6172044 NA 8.3870432 10.1884841 -0.3827015 10.5772074 4.8266603 5.5479433 4.0095263 10.0019892 11.7214766 10.3476756 11.7930669 12.5800111 8.7995999 10.7602698 10.1602567 10.9037632 9.5894673 4.1090596 12.1250001 11.6191414 NA 10.2860905 8.6157959 4.3475735 4.4998459 11.7160601 10.2337544 10.1180474 9.6533791 2.0766275 9.0340030 14.5922252 13.1805210 10.7500265 9.9670396 0.596020 0.602860 0.279160 0.263170 -0.133420 -0.543300 1.022600 -0.536620 0.862950 0.862950 0.645610 -0.116940 -0.116940 0.299950 0.299950 0.299950 0.190260 0.190260 0.742900 1.012000 -0.512800 0.260360 0.260360 0.260360 -0.161540 -0.546530 0.229470 0.338040 -0.548340 -0.065581 -0.106700 0.279160 -0.133420 -0.133420 -0.543300 -0.543300 1.022600 -0.536620 -0.536620 0.286980 0.306650 -1.045500 0.277580 0.277580 -0.530530 -0.535120 -0.116940 -0.098814 0.215760 0.299950 0.299950 0.299950 0.190260 0.190260 0.190260 0.219830 1.012000 1.012000 -0.493400 -0.532690 0.283110 0.260360 -0.132380 -0.551560 0.229470 0.338530 0.230250 -0.553370 -0.553370 -0.117 -0.117 0.216 0.216 0.190 0.190 0.220 1.012 -0.513 1.079 0.576 0.260 0.260 -0.129 -0.129 -0.547 -0.317 0.000 0.596 0.338 0.338 0.230 -0.553 -0.111 -0.111 0.263 0.263 -0.133 -0.133 -0.543 -0.543 1.001 0.464 0.287 0.287 0.000 0.646 0.278 -0.535 0.000 0.000 -0.117 -0.117 0.216 0.216 0.190 0.190 0.220 1.012 -0.513 1.079 0.576 0.260 0.260 -0.129 -0.129 -0.547 -0.317 0.000 0.596 0.338 0.338 0.230 -0.553 -0.111 -0.111 0.263 0.263 -0.133 -0.133 -0.543 -0.543 1.001 0.464 0.287 0.287 0.000 0.646 0.278 -0.535 0.000 0.000 8.6172055 NA 4.7464901 11.2252293 12.2417725 7.1573722 11.0473967 7.9469343 9.4368498 3.3720885 12.0914184 11.2632759 1.9391513 -1.3827015 3.4245594 8.6533789 3.2021669 11.3538188 11.6873264 10.8008409 9.9626108 5.5597212 8.1698744 9.9714549 6.2896316 4.8266603 0.9391513 NA 10.3085129 5.3720919 7.3586723 8.4229495 11.2433708 10.9392209 10.4181054 3.2021669 9.1427264 -0.3827015 5.6172044 11.6956899 7.9368776 7.0807301 0.2021356 5.0265965 8.0180850 5.2319162 3.5241013 NA 5.3314508 1.7871399 3.1407623 10.7672701 2.2021669 7.4720742 11.6322720 10.1851616 4.8651319 9.8816481 13.8867340 7.4875700 3.8266603 3.6172044 10.1969928 2.0766275 -1.3827015 -1.3827015 1.6172044 12.245354 5.009522 8.736147 13.933310 10.640960 11.283651 13.531591 10.646148 9.077661 10.433389 13.117363 10.046612 8.387043 8.938006 -1.382702 7.175626 10.955385 10.237425 12.765364 7.187061 13.757671 9.009523 6.140768 9.585152 7.620020 10.398700 6.391993 5.076636 10.531591 6.925545 3.475189 10.609790 5.261061 6.666836 10.709632 9.803320 11.543316 9.433389 9.270946 8.301954 5.303708 11.414644 10.012204 11.778337 10.911826 9.287862 8.843618 10.742296 9.876360 7.499848 NA 10.007235 5.594486 10.188484 4.902609 10.577207 6.140768 9.923267 10.001989 6.324564 14.061282 9.878125 11.059890 12.869132 10.751311 2.617204 -1.382702 10.969525 10.255641 8.640960 TCGA-BH-A0BV 78 0 NA 1519 breast stage iib t2 n1a m0 female 2006 NA no infiltrating ductal carcinoma 2 white NA 1 1 1 NA 2 2 1 1 5 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6.935946e-07 2.080784e-07 14.8148148148148 37.037037037037 0 25.9259259259259 22.2222222222222 10.282166 10.043903 11.924509 9.262019 8.700312 8.611101 10.085768 10.239757 9.446299 14.119409 11.205706 11.071176 NA 12.578617 3.373050 8.883778 6.077596 7.921944 8.281721 13.258351 2.525042 13.951388 1.425513 10.181893 10.391714 6.640531 NA 8.730264 11.997270 2.077585 7.500806 6.837331 NA 5.061107 10.720467 10.163127 10.662899 9.663923 10.292355 11.647795 2.318606 11.252974 14.942801 8.230792 9.216215 11.874519 11.522798 3.788091 3.203123 9.898934 12.155381 -1.381949 11.011285 5.438343 6.476143 5.061107 10.429136 11.819674 10.406066 12.096301 12.891376 8.988850 10.797139 10.509274 11.004564 11.287269 5.788088 11.605960 9.109014 NA 10.749055 8.313391 2.621759 6.027554 11.184693 9.882019 10.249340 9.820287 2.203138 9.480025 12.451448 11.097438 10.525053 9.486985 0.82490000 1.10560000 0.07196600 0.07196600 -0.26877000 0.02834100 -0.01896100 0.00000000 -0.66856000 3.65690000 0.07383300 -0.27523000 -0.27523000 0.08082400 3.65690000 -0.64678000 0.05565800 0.05565800 -0.66950000 0.05993700 -0.00761010 0.07110400 0.07110400 0.07110400 0.00069327 0.00069327 0.00069327 0.11638000 -0.29260000 -0.29260000 -0.25043000 0.07196600 -0.26877000 -0.26877000 0.02834100 0.02834100 -0.01896100 0.00000000 0.00000000 0.07056300 0.07599100 -0.66962000 -0.28453000 -0.28453000 -0.28453000 -0.28453000 -0.27523000 -0.27523000 0.08082400 0.00027728 -0.64678000 -0.64678000 0.05565800 0.05565800 0.05565800 -0.62484000 0.05993700 0.05993700 0.01237600 0.06504500 0.07110400 0.07110400 -0.06397200 0.00069327 0.00069327 0.11638000 0.05679800 -0.69929000 -0.69929000 -0.275 -0.275 -0.651 -0.651 0.000 0.000 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.293 -0.293 0.116 0.116 0.000 -0.699 -0.609 -0.609 0.000 0.000 -0.269 -0.269 0.000 0.000 0.000 0.000 0.000 0.000 -0.669 -0.669 -0.285 -0.285 0.077 -0.313 -0.275 -0.275 -0.651 -0.651 0.000 0.000 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.293 -0.293 0.116 0.116 0.000 -0.699 -0.609 -0.609 0.000 0.000 -0.269 -0.269 0.000 0.000 0.000 0.000 0.000 0.000 -0.669 -0.669 -0.285 -0.285 0.077 -0.313 8.6446862 0.6181447 4.9757127 9.9367057 11.4671770 7.4618011 10.7949594 10.3868187 9.0428016 0.2031385 11.1281852 11.6587729 5.2763738 0.6181447 3.4255130 8.4885275 4.6405284 10.6471050 11.0994578 11.1561092 8.9812025 -0.3817613 8.6720887 9.9975412 6.9535528 3.1417271 1.6181447 NA 10.6720888 5.8565675 7.3562548 7.4605132 4.4761419 9.6003151 10.7358060 3.8660870 8.6279916 -1.3819493 7.3220660 11.6462417 6.7422838 7.7214506 -0.3817613 0.9400540 8.8660904 -1.3819493 4.9932033 NA 6.0775955 4.6436369 3.4255130 10.1431943 NA 7.2365481 10.2606659 10.0724622 4.5723622 10.2360894 13.0734259 8.8529804 2.8660969 3.4255130 13.5729954 3.4255130 NA 2.8660969 1.4255130 14.1808823 4.7474465 8.2180759 12.5786174 9.9718611 11.1034891 13.2583514 12.5941004 8.6209778 11.2425015 13.2190050 10.3817903 9.8989337 8.9975414 -0.3817613 7.1918104 11.7691795 10.9746149 12.0421979 6.6068479 13.3563571 8.4589409 6.2834996 9.0349604 9.1368161 10.5704237 7.2834986 10.1239744 11.2057061 6.7161953 0.2031385 10.7296247 5.9400916 7.7020944 10.5332954 10.1932294 11.1967715 7.9127834 9.1229820 13.5345556 5.6293916 9.7249220 10.6628985 11.0399648 10.2370072 11.1512492 9.8116882 8.6011564 10.8385413 8.7717149 NA 9.1282545 7.3186025 12.1553813 6.2031248 11.0112852 7.7880879 10.4784740 10.4291362 6.9801064 12.6430428 10.6546800 9.6398370 13.3404902 10.4478857 0.6181447 0.2031385 10.3306899 10.6923044 9.0264927 TCGA-BH-A0BW 71 0 NA 2371 breast stage i t1c n0 m0 female 2006 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 3 3 4 NA 6 1 5 5 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.803346e-06 5.548757e-07 14.7058823529412 13.2352941176471 4.41176470588235 38.2352941176471 29.4117647058824 10.766288 9.981644 11.755259 10.994989 8.962591 10.078724 9.169681 11.070591 10.038349 14.876762 9.801562 11.128723 4.844983 12.590160 3.951895 8.446800 5.019012 9.254808 9.297672 8.272106 NA 9.866211 6.542572 8.928599 10.406637 8.631042 0.881508 13.618171 10.022593 1.559590 8.302731 8.880380 NA 5.273825 10.557464 9.859360 9.001486 10.215110 9.666796 10.987939 NA 5.709326 14.172217 8.092461 9.715662 11.123491 12.408984 4.647044 NA 10.080198 10.776022 NA 9.022081 5.593001 7.749404 5.678520 10.151569 11.845126 9.612147 10.323207 13.058242 7.741974 10.453260 10.332929 11.490686 11.692400 6.152035 11.899151 7.998371 -1.440263 10.793498 9.562394 2.647890 6.448323 8.920426 10.156235 10.757717 10.384538 3.881508 4.749406 11.650023 11.289625 10.061416 9.318635 0.4938600 1.4214000 -0.5229900 0.0414560 0.4999100 -0.0194810 0.0880820 -0.5166300 -0.5330900 -0.5330900 1.0772000 0.4912600 -0.5400900 0.0092797 0.0092797 0.0092797 -0.2601300 0.1674200 -0.3211400 -0.5285100 -0.0241430 1.6396000 0.4837000 0.5327000 -0.5356300 0.4617400 -0.0284210 0.0094190 0.0176530 0.0176530 0.5046000 -0.5229900 0.0252200 -0.0410530 -0.5185800 -0.4822900 0.0880820 -0.5166300 -0.5393800 -0.5033100 -0.5253400 -0.5388800 -0.5292200 -1.0733000 -0.0019697 -0.0019697 -0.7898600 -0.5347200 0.0092797 0.0092797 0.0152770 -0.0055673 -0.2601300 0.1674200 0.0825890 -0.3211400 -0.5285100 -0.5285100 -0.5358300 0.4666900 -0.5555900 -0.0220880 -0.5272800 -0.5356300 -0.0165140 0.0044111 -0.0200300 -0.0034926 0.1463100 0.000 -0.535 0.000 0.000 -0.120 0.140 -0.321 -0.529 0.000 0.000 0.000 -0.556 -0.556 0.000 -0.523 -0.507 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 0.000 0.000 0.000 -0.428 0.000 -0.517 0.000 0.000 0.000 0.000 -0.519 0.000 -0.115 0.000 0.000 -0.535 0.000 0.000 -0.120 0.140 -0.321 -0.529 0.000 0.000 0.000 -0.556 -0.556 0.000 -0.523 -0.507 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 0.000 0.000 0.000 -0.428 0.000 -0.517 0.000 0.000 0.000 0.000 -0.519 0.000 -0.115 0.000 9.0841209 -1.4402635 4.4175623 9.3717566 11.3711547 6.0460523 10.6433910 9.6585984 8.6665347 0.1445685 11.7450742 11.1284688 3.9171357 NA 3.9858465 7.7641504 5.9346179 12.3038876 11.8718950 11.3683424 8.2016309 1.3669236 8.9732072 9.2469550 7.2703860 7.7835811 5.0673720 0.1445685 11.7229145 2.1445359 5.0514330 8.4237656 6.2669383 9.7355156 10.5662560 4.7883986 9.3227917 0.1445685 8.9572539 11.5066682 8.8938527 6.0673741 -0.4404592 1.1445685 7.7543364 5.1594919 2.0190258 NA 6.5930026 3.7406794 9.0821608 9.0514325 1.7294875 12.5599315 10.2074873 9.9486728 5.9083085 9.4360962 14.6761466 9.1907563 6.5020935 4.3669376 9.3219612 2.4664705 3.6470381 -1.4402635 7.5847190 11.741995 8.392469 9.523198 12.590160 10.006663 11.153904 8.272106 10.181631 8.999410 11.126109 13.361086 9.063405 10.080198 7.930267 NA 8.037338 11.344623 11.044402 10.932988 6.917131 14.449343 8.756796 6.912727 9.033285 9.662211 10.299457 7.956184 4.709324 9.801562 5.366934 7.881507 10.812245 4.019008 10.543118 13.972811 11.573425 10.511956 7.954042 8.938958 11.246080 7.673322 10.974819 9.001486 10.016960 9.301046 11.866922 11.496033 11.422217 10.951897 9.917131 -1.440263 9.488793 8.276467 10.776022 8.085100 9.022081 5.366934 10.810470 10.151569 8.434561 12.429748 10.374963 10.627014 14.222887 9.433023 5.051433 1.559590 11.142897 10.482907 9.855348 TCGA-BH-A0BZ 59 0 NA 2255 breast stage iiia t3 n1a m0 female 2007 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 3 2 1 2 6 2 2 2 4 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.722155e-06 1.24847e-06 6.89655172413793 26.1083743842365 2.46305418719212 42.3645320197044 22.1674876847291 10.1379216 9.5366311 11.6063220 8.9051836 8.8190828 9.1239375 9.5272170 10.5007066 10.2569629 13.5374006 10.8067345 10.6483138 -0.1428948 12.7144840 1.4421208 9.3463300 4.3165802 8.2336379 8.9375245 12.3540047 2.4421208 12.6292593 2.8571450 9.9942232 10.6698631 7.4446157 0.5940708 10.7842622 10.4992026 1.5941185 8.9595641 7.3490043 -1.7278573 4.5941185 9.0119691 10.4607773 9.1239375 9.2183637 9.1011182 10.7645424 -0.7278573 8.2494686 15.0669977 8.3901303 10.2735967 10.8072207 10.7834469 3.7640382 5.9160442 8.4558237 10.2376120 -0.1428948 11.1303637 7.3623007 6.9691562 5.7479217 9.8453622 11.6612820 10.2767601 11.4898432 12.3036312 7.5413150 10.5462753 9.7656286 10.9613129 10.8463089 3.7640382 11.2645958 9.2672488 NA 10.4037239 9.2700736 3.1862787 6.3859314 9.8969838 9.2820172 10.7622872 10.2526851 3.3596477 7.6053439 12.1822690 11.2916054 8.9160445 9.4238393 0.1610000 0.1610000 -0.1080200 -0.0649640 -0.0782440 0.0388010 0.1212300 -0.2718500 0.5067200 0.5067200 0.5067200 -0.1173000 -0.1173000 -0.0533410 -0.0533410 -0.0533410 0.0055529 0.0055529 -0.2532200 -0.1174300 -0.1496500 -0.2343300 0.2490300 0.2490300 -0.0974950 -0.0974950 -0.0974950 0.3856800 0.1610000 0.1610000 -0.0366780 -0.1080200 -0.0782440 -0.1708800 0.0388010 0.0388010 0.1212300 0.1212300 -0.2718500 0.2421800 0.1373200 0.5067200 -0.0063668 -0.0063668 -0.0063668 0.0777180 -0.1173000 -0.2758300 -0.0533410 -0.0533410 -0.2439500 -0.2355700 0.0055529 0.0055529 0.0055529 -0.2532200 -0.1174300 -0.1174300 -0.1496500 -0.0989450 -0.2343300 0.2490300 -0.1511900 -0.0974950 -0.0974950 -0.3391200 0.1112500 -0.3020400 -0.3020400 -0.117 -0.117 0.000 0.000 0.000 0.000 -0.253 -0.117 -0.150 0.000 0.000 -0.234 0.015 -0.151 -0.151 0.000 0.000 0.161 0.161 0.386 0.386 0.111 -0.302 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.121 0.121 0.137 0.137 -0.786 -0.786 0.000 0.000 0.000 0.000 -0.117 -0.117 0.000 0.000 0.000 0.000 -0.253 -0.117 -0.150 0.000 0.000 -0.234 0.015 -0.151 -0.151 0.000 0.000 0.161 0.161 0.386 0.386 0.111 -0.302 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.121 0.121 0.137 0.137 -0.786 -0.786 0.000 0.000 0.000 0.000 8.4767596 3.2721875 4.4014735 9.8491452 11.9328529 5.8888114 11.2084583 9.1662937 9.0312444 NA 11.8589109 12.7815657 4.0535458 -1.7278573 1.2722024 7.7479217 4.2494681 12.5962283 12.0982403 10.8173942 9.3516732 -1.7278573 8.0370598 9.8785937 7.8420442 5.6209177 3.7957462 NA 10.1231566 7.1050788 6.9621869 8.4027588 5.6730673 9.9570861 9.9106243 2.1790651 8.5839368 NA 7.4091796 11.6833021 7.1394674 7.6031055 -0.7278573 4.4014735 7.7680434 0.5940708 4.0535458 -1.7278573 7.5105933 2.8697135 3.6645056 11.0747048 1.0795658 9.0254051 10.7915789 10.0295785 6.3702201 9.9173965 14.4231257 9.2480364 6.2551816 5.0535502 10.3007852 1.2722024 NA NA 3.6645056 13.886726 6.756004 7.696355 12.714484 9.490752 9.966982 12.354005 11.418439 9.362963 10.349338 13.109225 9.304923 8.455824 8.120811 3.481648 7.404046 12.655353 11.022477 12.035816 3.944615 13.314274 8.905184 7.481642 9.046976 8.781964 10.510289 8.011969 8.835385 10.806734 7.520116 NA 10.141011 5.908813 8.042439 11.127641 10.824137 10.245527 8.195516 9.710461 9.162453 6.857151 11.123203 9.123937 10.475231 10.305956 10.718238 9.960876 10.828455 11.095556 8.556434 1.857145 9.379569 7.033740 10.237612 6.607579 11.130364 8.192541 11.003507 9.845362 7.768343 12.871927 10.642603 10.099928 12.082358 10.231104 2.972619 1.079566 10.150239 9.686345 9.780974 TCGA-BH-A0C0 62 0 NA 1270 breast stage iia t1c n1a m0 female 2007 NA yes infiltrating ductal carcinoma 1 white NA 3 2 4 3 6 2 2 4 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.907385e-06 3.121176e-07 7.8125 21.875 3.125 29.6875 37.5 9.5597260 9.5018145 11.3299279 9.4593792 9.8569921 9.4050034 9.8962516 9.7937982 10.7308149 12.4041525 10.4300609 10.4054894 4.1176535 13.2869213 5.0791818 8.5117799 7.3932901 7.9411903 12.1616182 12.3588234 NA 13.5360630 6.7645452 9.5188315 10.9270429 5.4546892 -0.1302075 13.8681078 10.7273204 1.4547023 8.2555904 7.2917932 3.9141244 5.4844379 9.6445152 9.9438695 9.2084643 10.1763594 10.3957382 10.9317742 2.0396648 11.4410067 14.3535438 7.3786720 10.2933535 10.8340689 11.2983499 5.3126724 -1.1303654 9.4001344 9.6535448 NA 9.7152182 5.5279398 8.2051183 5.5135855 10.1551303 11.5629972 9.3864131 10.7807455 12.5920019 8.0396533 10.8669075 10.6058425 10.9270429 10.8788568 4.5421528 13.1525993 10.5350639 1.1916258 10.5310608 9.5198823 2.3291523 6.0985459 9.1504988 9.9378346 10.8322626 10.9283963 2.5701714 9.1574404 12.2558600 12.5118926 10.0991478 8.4917798 -0.18584000 -0.22662000 0.25662000 0.69036000 0.21100000 -0.00998720 -0.24180000 0.08446400 -0.25950000 0.41546000 1.56400000 0.20763000 0.00805670 0.25386000 0.04230700 0.04230700 -0.22478000 -0.09657200 -0.44307000 0.00889200 0.43699000 -0.23349000 0.32147000 0.82686000 0.16911000 0.23225000 0.19832000 0.47621000 -0.22945000 -0.18584000 -0.04911100 -0.22748000 -0.48144000 -0.25777000 -0.22785000 -0.27806000 0.02932500 0.08446400 -0.24047000 0.03256300 0.01393400 -0.25950000 -0.09446000 -0.09446000 -0.09446000 0.48182000 0.00805670 0.04982400 -0.30796000 -0.00027724 -0.20734000 -0.19700000 -0.22478000 -0.22699000 -0.22293000 -0.22957000 0.00819590 0.00819590 -0.20250000 0.25027000 -0.23349000 -0.60642000 -0.25104000 0.39529000 -0.25092000 -0.24070000 0.02020300 0.02340000 0.00485790 0.107 0.000 -0.207 -0.207 -0.225 -0.225 -0.187 0.000 -0.201 -0.120 -0.346 0.141 0.274 -0.003 0.238 0.169 -0.082 -0.186 0.206 0.242 0.242 0.000 0.303 0.101 0.000 0.239 0.239 -0.481 -0.124 -0.076 -0.228 -0.175 -0.175 -0.111 0.000 -0.232 1.161 0.000 0.000 0.000 0.000 0.107 0.000 -0.207 -0.207 -0.225 -0.225 -0.187 0.000 -0.201 -0.120 -0.346 0.141 0.274 -0.003 0.238 0.169 -0.082 -0.186 0.206 0.242 0.242 0.000 0.303 0.101 0.000 0.239 0.239 -0.481 -0.124 -0.076 -0.228 -0.175 -0.175 -0.111 0.000 -0.232 1.161 0.000 0.000 0.000 0.000 7.8180951 -0.1302075 4.1551339 10.1182486 12.0683266 6.3666212 10.1312354 9.3145669 8.7022541 1.1916258 12.7698401 12.0965045 6.0396539 3.3932926 2.9571903 8.2228751 5.2447691 11.0384002 12.1154293 9.9127554 9.6212720 -1.1303654 8.0816166 10.0651002 8.1057425 10.1882708 3.0396473 NA 10.1746497 6.0694014 5.8004651 8.9717036 8.0346350 10.9789482 9.7690849 4.2272790 8.9585162 -0.1302075 6.0194751 12.5147109 7.9730160 7.7615120 -1.1303654 8.4990845 8.4030576 5.0194751 2.6770797 NA 8.0421557 4.2177503 4.0791818 10.9795587 0.8697135 6.6706279 10.0925230 10.2256297 6.7584711 10.9188960 14.0537898 9.7308150 7.4733543 5.0791818 10.4940666 1.1916258 NA 1.4547023 1.6770797 12.488680 6.029599 8.428149 13.286921 9.665768 10.540827 12.358823 12.231124 9.393290 10.135929 12.963228 11.198683 9.400134 8.467780 2.957190 8.178067 10.622945 11.485128 11.782430 4.847010 13.246123 8.755424 7.986072 8.478907 6.264962 10.788714 8.329159 6.733914 10.430061 6.727709 1.191626 10.510877 5.295991 7.919059 9.394270 11.419994 10.104545 8.611195 8.189400 12.118397 8.978253 10.657937 9.208464 10.730039 10.100949 10.477983 10.147015 10.509069 11.156286 8.571901 1.869714 9.134734 7.487857 9.653545 8.627951 9.715218 4.677085 11.338352 10.155130 7.588192 13.378946 10.237689 10.617921 12.680099 11.834971 6.253432 1.869714 10.059553 9.886536 10.061404 TCGA-BH-A0C1 61 1 1411 NA breast stage iiia t3 n2a m0 female 2007 NA yes infiltrating lobular carcinoma 8 white not hispanic or latino 1 2 2 NA 5 3 2 2 6 3 NA NA 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.427581e-07 25 14.2857142857143 0 42.8571428571429 17.8571428571429 10.63658339 10.39514058 11.89022429 10.38663745 7.76131719 9.37019829 9.99928622 10.29191626 9.95587944 9.17251252 11.69241390 10.62518335 0.72132891 12.89628960 3.75692721 8.40780225 6.16755864 8.15259008 9.04232778 13.37879861 1.39938987 13.58335766 5.79169167 8.77693106 11.26065425 4.35357031 -0.60055544 8.92391514 9.80131955 2.56929665 8.95875047 6.78307812 -1.60077421 4.23226166 10.26781023 11.12367408 9.46882318 11.86110866 10.53860499 12.08072164 -0.60055544 11.06537547 15.03357471 8.57383726 9.75250927 11.21235290 11.02736323 4.68477386 3.56929665 8.95492126 11.60516668 NA 11.14294562 6.49213039 6.07885317 4.33011376 10.75555025 12.10230362 10.41478849 13.18242280 12.91538118 7.85264436 11.24152734 10.78629209 11.51409183 11.02371194 5.08587500 11.56616419 11.82524494 0.98433414 10.05803124 9.25034153 3.13000830 6.39372680 11.14882387 10.47652295 9.50724441 9.88117286 -0.01566586 10.60913136 13.01827506 12.96078072 10.85238679 9.39160363 1.519600 1.505300 -0.150290 -0.150290 -0.155030 0.181710 0.200600 0.175610 0.186920 0.186920 0.186920 -0.130110 -0.130110 -0.135740 -0.135740 -0.135740 0.204420 0.851060 -0.156940 -0.125640 -0.483340 -0.445020 -0.089302 -0.450400 0.278840 0.278840 0.278840 0.252030 -0.436900 -0.491200 0.132140 -0.150290 -0.155030 -0.167770 0.181710 0.181710 0.200600 0.175610 0.175610 0.192230 0.193900 0.186920 -0.075345 -0.075345 -0.075345 -0.075345 -0.130110 -0.112730 -0.135740 -0.135740 -0.135740 -0.150940 0.204420 -0.484600 -0.484600 -0.156940 -0.125640 -0.125640 -0.462910 -0.464930 -0.454270 -0.450400 0.208240 0.278840 0.278840 0.257460 0.221450 -0.057789 -0.057789 -0.130 -0.130 -0.136 -0.136 -0.280 -0.485 -0.157 -0.126 -0.463 0.235 -0.230 -0.450 -0.450 0.208 0.208 0.279 0.279 -0.491 0.949 0.252 0.252 0.221 0.000 0.144 0.144 -0.150 -0.150 -0.155 -0.155 0.182 0.182 0.201 0.201 0.192 0.192 0.187 0.187 0.000 0.000 0.000 0.000 -0.130 -0.130 -0.136 -0.136 -0.280 -0.485 -0.157 -0.126 -0.463 0.235 -0.230 -0.450 -0.450 0.208 0.208 0.279 0.279 -0.491 0.949 0.252 0.252 0.221 0.000 0.144 0.144 -0.150 -0.150 -0.155 -0.155 0.182 0.182 0.201 0.201 0.192 0.192 0.187 0.187 0.000 0.000 0.000 0.000 7.1807327 7.9268504 6.5541913 10.0889346 10.7541737 5.7477472 12.0863116 9.1404190 8.2500762 1.9843341 11.9289260 11.3807195 1.3993899 0.3993352 1.9843341 8.1954131 3.7212961 10.2827804 11.4107754 11.1532169 8.9199922 1.8588165 7.5592448 9.8639191 6.9150727 4.7392216 1.2067057 -1.6007742 10.8821814 6.9190099 7.6233753 8.5026612 8.3077659 9.9747520 11.5006926 5.3301102 8.9587505 NA 8.2195524 12.7683572 7.5052820 7.1408400 NA 7.1642452 8.1272938 -0.6005554 3.8912247 -0.6005554 5.9539613 4.3336527 0.9843341 10.8469733 -0.6005554 8.5830087 10.5981254 9.2896376 5.2573539 9.6544021 13.8978175 8.3197263 4.0140874 4.4868366 10.9121139 2.5692966 -1.6007742 NA 1.3993899 13.252488 5.907167 8.209945 12.896290 9.983866 11.576326 13.378799 11.641357 8.744779 11.089371 13.955311 11.665867 8.954921 9.316746 NA 6.167559 11.926606 11.5184767 12.0050844 7.2573548 13.7133186 8.8811727 6.9768024 8.8045150 8.2448633 10.8551578 7.3212147 5.4327958 11.6924139 5.7830768 3.6847739 10.8137944 9.4071016 7.3626452 11.0430042 10.1170498 10.7176338 7.9654276 7.3564757 12.7704013 5.2448642 10.8928912 9.4688232 10.3422544 9.5344414 11.4868363 9.7684254 10.2542418 10.7746845 9.2758903 1.7212852 9.6096246 9.4721224 11.6051667 5.4217417 11.1429456 7.7591232 10.3944657 10.7555503 7.0468315 13.5910881 9.4362339 10.2884971 12.7121855 11.5699245 4.2820172 0.7213289 10.0731241 10.4475197 9.2581316 TCGA-BH-A0C3 47 0 NA 2709 breast stage i t1c n0 m0 female 2006 NA yes mixed histology (please specify) 0 white NA 2 2 1 3 3 2 6 4 4 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 3.121176e-07 1.387189e-07 15.3846153846154 0 7.69230769230769 46.1538461538462 30.7692307692308 10.9803571 10.2207609 11.8184524 10.0585504 8.5916600 9.0055106 9.3008346 9.7339013 9.6337512 12.9532960 11.8017973 10.3586828 0.7587296 12.6133462 5.3586811 9.5781508 6.5916600 8.5483037 9.7573603 11.9458127 1.7587722 11.2256112 5.4311950 9.5034777 10.3757782 7.7012843 0.3436921 9.4320790 9.8770622 3.7129699 8.2764394 8.0255565 -0.2412704 5.1510876 9.8574601 10.6167510 9.5677340 10.2440962 9.6291347 11.6690379 -1.2412704 9.7664981 14.5893099 8.4283108 9.6245032 11.1944402 11.4028515 5.1510876 6.5531854 9.7467446 11.3730197 -1.2412704 12.1749077 6.1338101 6.8828912 5.3881275 10.4513855 11.4672073 10.0043227 12.3119192 12.7724416 8.4592099 10.9473588 10.6219767 11.6716593 11.6017095 4.8880516 12.1226310 8.9021532 3.2182077 10.6062188 8.9374347 3.5666447 5.8777099 9.5119866 10.2481163 10.4751608 10.2536256 3.2182077 7.8382547 12.8122717 12.3103581 9.3716384 9.1229046 1.9804000 0.3516900 0.0000000 0.0000000 0.0027745 0.0027745 -0.2098300 -0.2098300 -0.0045695 -0.0045695 -0.0045695 0.0031910 0.0031910 -0.2887800 3.6569000 -0.2876200 -0.0107840 -0.0061935 0.0083351 0.0066653 -0.0034627 -0.0776660 -0.0776660 0.4737500 -0.0457160 -0.0457160 -0.0501000 0.0997320 0.0047190 0.0026357 0.0087528 0.0000000 0.0027745 0.0110490 0.0027745 0.0027745 -0.2098300 -0.2098300 -0.2098300 -0.0048461 -0.0048461 -0.0045695 -0.2921400 -0.2921400 -0.2921400 -0.2959100 0.0031910 0.0031910 -0.3320200 -0.2887800 -0.2771500 -0.2771500 -0.0107840 -0.0061935 -0.0162920 0.0083351 0.0066653 0.0066653 -0.0034627 -0.3015700 -0.0776660 -0.0776660 0.0105640 -0.0457160 -0.0501000 0.0997320 0.0095883 -0.3250700 -0.3250700 0.000 0.000 -0.277 -0.277 0.000 0.000 0.000 0.000 0.000 0.540 -0.302 0.474 0.474 0.000 0.000 0.000 0.000 0.352 0.352 0.000 0.000 0.000 -0.325 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.210 -0.210 0.000 0.000 0.000 0.000 -0.292 -0.292 0.000 0.000 0.000 0.000 -0.277 -0.277 0.000 0.000 0.000 0.000 0.000 0.540 -0.302 0.474 0.474 0.000 0.000 0.000 0.000 0.352 0.352 0.000 0.000 0.000 -0.325 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.210 -0.210 0.000 0.000 0.000 0.000 -0.292 -0.292 0.000 0.000 7.8725124 NA 6.7976888 10.9371236 12.0528163 6.9510632 11.0801344 10.1787302 8.6439171 4.6414131 11.4826442 11.4999736 4.3437347 5.4026267 4.4866886 8.0232127 3.7587722 10.6802390 10.8184524 12.0469151 8.2486178 3.1510795 7.8167616 9.9455032 8.0716527 9.8679477 6.1074975 -1.2412704 11.0146837 8.1008447 7.8541671 9.2375396 6.8777111 9.6684681 10.5845238 3.9286925 8.4574745 -0.2412704 8.4849880 12.2158943 8.8017973 8.2920998 NA 5.8880540 8.5483037 -1.2412704 4.5401327 NA 6.1596494 5.4065163 4.0807003 10.4626735 -1.2412704 10.9386791 10.2847800 9.6042600 5.8983220 9.7020173 13.0778070 9.1478635 4.8462325 3.8031650 12.4849881 0.3436921 NA -1.2412704 3.3437347 15.167151 6.867295 8.638353 12.613346 10.552190 10.856473 11.945813 12.524367 12.153768 10.990891 13.769298 10.677261 9.746745 8.714420 1.343749 7.727437 10.767549 11.2104963 11.8933567 5.5916615 13.0910150 8.8633686 7.2586160 8.7231107 9.0522417 9.7583755 7.7158721 8.7012846 11.8017973 5.8462325 3.5136550 11.0539649 4.8031650 7.4165890 11.9712663 10.3656378 10.7270768 8.9148530 8.2120406 12.7338118 7.6136385 11.2984329 9.5677340 10.3926733 9.5709473 10.5094769 10.6850660 10.6664118 10.2650776 9.0149787 NA 9.4136565 7.9132084 11.3730197 6.3361995 12.1749077 7.5884928 10.3061466 10.4513855 7.9899910 13.6812596 10.3958476 10.3037344 12.5656216 10.1229046 5.1510876 0.7587296 10.4730155 10.4712969 9.6120795 TCGA-BH-A0C7 48 0 NA 2767 breast stage iib t2 n1mi m0 female 2006 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 2 1 NA 2 3 1 1 1 6 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 3.121176e-07 22.5806451612903 19.3548387096774 0 38.7096774193548 19.3548387096774 10.55296875 10.33606945 11.71958219 10.01573952 9.06919195 8.89462438 9.95342327 10.75285035 9.39698531 14.36428506 11.63395693 10.93932944 1.75979500 13.39851748 4.01356052 8.96023020 5.55121760 8.80923275 12.08493555 12.89802567 3.99010169 14.19388998 2.91733627 9.08009347 10.36514014 3.34477170 0.38128337 9.23428910 9.48824686 3.30729737 7.24671590 7.29776827 1.05935528 3.81425304 10.11396767 9.48142812 9.00991929 10.85743009 10.32790536 11.45154665 2.22928028 12.07582350 14.22909270 10.34747388 10.29058153 11.19939427 12.05786568 4.75980565 5.87314385 9.22049538 11.01646547 NA 10.98769668 5.31675036 5.51057588 5.86671762 8.91033152 12.07930154 10.00991929 12.07059065 12.40981920 7.88908592 10.30194208 10.20348627 11.86983463 11.22301304 4.26881613 11.65834637 11.71288028 0.05935528 10.00919011 9.38016384 3.82384105 4.95418235 10.96493840 11.69723353 10.34216225 9.95872032 1.51878690 5.73884348 12.19274645 11.08207797 9.60432787 8.99526516 0.55514000 0.45023000 0.03031000 0.03129500 -0.57595000 0.32624000 0.03284500 0.01936300 0.01614600 0.01614600 0.01614600 -0.26372000 0.00332990 0.07397700 0.07397700 0.07397700 -0.26997000 -0.26997000 1.36800000 -0.00318590 -0.25400000 -0.56435000 0.56952000 0.56952000 0.24016000 -0.25346000 -0.28037000 -0.07307600 -0.25721000 -0.25721000 -0.25926000 -0.55747000 -0.57595000 0.01740400 0.02595200 0.02053800 0.03284500 0.01936300 0.01936300 -0.27857000 0.02454800 -0.57708000 -0.57309000 -0.57309000 0.02595500 0.01488800 0.00332990 0.00332990 0.07397700 0.07397700 -0.56475000 -0.56863000 -0.26997000 -0.26997000 -0.26997000 -0.57476000 -0.56127000 -0.00926660 -0.24849000 -0.24338000 -0.56652000 0.56952000 -0.55777000 0.22569000 -0.28037000 -0.57842000 -0.00041585 -0.55587000 -0.56803000 -0.264 0.000 0.000 0.000 -0.270 -0.270 -0.573 -0.561 -0.248 0.330 0.087 0.005 0.570 -0.558 -0.558 0.240 -0.013 0.193 0.450 0.000 0.000 0.000 -0.571 -0.556 -0.556 0.000 0.000 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.572 -0.572 -0.552 0.000 0.000 0.000 -0.264 0.000 0.000 0.000 -0.270 -0.270 -0.573 -0.561 -0.248 0.330 0.087 0.005 0.570 -0.558 -0.558 0.240 -0.013 0.193 0.450 0.000 0.000 0.000 -0.571 -0.556 -0.556 0.000 0.000 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.572 -0.572 -0.552 0.000 0.000 0.000 8.0982822 3.3447717 4.5023051 9.8488971 12.0930445 6.7918362 10.6476095 9.1428892 7.9420065 2.6443178 12.3797409 11.1345651 3.7598056 2.0593553 4.1254527 7.9647504 2.6443178 10.6113119 11.7871775 11.5074797 8.7441120 2.8142428 8.1925054 9.9522857 6.2292880 5.4080902 5.7175750 NA 11.0574249 5.2192344 6.2141812 8.5965819 6.6101094 9.2284491 10.6139522 3.4169208 8.7624016 NA 6.6139530 11.4335878 8.6905404 6.4169157 NA 6.7804623 8.7122085 2.6443178 4.6887175 -0.3556822 5.0135605 3.6289135 2.5187869 10.3531224 NA 7.7476136 10.6089074 9.6415054 4.0593639 9.0113765 12.9330959 7.0593639 3.0135516 3.3447717 13.3884940 1.3812834 NA 3.0593553 0.8667102 11.985658 8.399213 7.744112 13.398517 11.596072 11.296424 12.898026 13.441210 9.667156 10.896794 12.773341 11.761753 9.220495 8.686897 1.966246 8.561200 12.384880 11.1192148 11.6405640 6.9111127 12.9068603 8.4866762 6.0077315 8.9587203 10.7218093 10.6616262 6.4687544 8.8537793 11.6339569 6.8209142 2.3812834 10.4978953 4.8407251 9.4336585 10.7860073 10.3164566 10.8663157 7.9989424 9.1037575 11.7901519 5.6592767 12.1856847 9.0099193 9.6315900 10.0999956 11.7645638 10.0370011 10.4719333 11.1722915 9.2342891 0.8667102 8.9012736 6.8209142 11.0164655 5.6367928 10.9876967 7.6850725 10.9015173 8.9103315 7.9358805 12.9778540 10.1321659 10.5036019 12.7847297 10.6002179 3.9662551 -1.9406447 10.7373032 10.4735201 9.7813169 TCGA-BH-A0DD 58 0 NA 2486 breast stage iib t2 n1a m0 male 2006 NA no infiltrating ductal carcinoma 0 white NA 1 1 1 2 2 2 1 1 2 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 2.427581e-07 62.5 6.25 6.25 6.25 18.75 11.04776930 10.22831342 12.03999324 10.03819280 7.99379888 9.45178828 9.33462704 10.29537027 9.08498692 14.29111809 11.31869628 11.13570929 1.94542043 15.15513822 4.53039541 8.76909234 6.61012569 8.72082156 9.22831342 12.85621463 NA 13.65365737 1.80793188 8.49583265 11.48494697 3.39289439 0.07093882 8.63828892 10.95284526 3.69545938 7.48318375 6.96578428 1.80793188 3.34399047 9.65028241 10.49723132 9.15045128 11.34922239 10.09979344 12.21488112 -1.51416103 11.51304605 14.21232863 9.24899229 9.28041980 10.98485320 13.38304586 5.40486566 2.80793188 9.33775301 11.54484135 -1.51416103 11.56215154 5.17250352 4.97785689 4.15842590 9.62043026 12.50628953 9.73866939 12.11399380 12.73059084 8.01152471 11.53670298 11.06501350 11.63352698 11.33638622 5.84355680 11.98597443 11.85995666 -1.51416103 10.16240190 9.24256035 3.62104378 4.55209421 9.70335597 9.16899872 10.12805569 10.68782163 5.81691964 9.24422729 12.50115769 11.31016724 10.62715319 9.18904248 0.48051000 1.41530000 -0.00470790 0.01251600 0.01922300 -0.00455970 -0.00496910 0.02108000 -0.01257600 -0.01257600 1.46530000 -0.01972600 0.00000000 0.42839000 3.65690000 0.96843000 -0.03059900 0.51263000 -1.24510000 0.02174400 -0.01216200 3.65690000 3.65690000 1.52420000 0.34909000 0.37479000 0.37479000 0.48027000 -0.61278000 -0.49965000 0.00305220 0.00805670 -0.01230000 -0.01202400 0.02104300 0.02104300 -0.03523800 0.02300500 -0.03231400 0.49441000 0.44762000 -0.02197300 -0.01656700 -0.01656700 -0.01656700 -0.01656700 -0.00596310 -0.00596310 -0.06424000 -0.59195000 -0.53551000 -0.53551000 -0.00069303 0.51943000 0.47392000 -0.85623000 -0.02374500 -0.02374500 -0.01174900 -0.03817000 -1.15450000 -0.08213700 0.52958000 0.37792000 0.37479000 0.47169000 0.04216600 -0.05805800 -0.05805800 0.000 0.000 0.000 -0.536 0.440 0.440 -1.293 0.000 0.000 0.000 0.000 -0.600 0.000 0.529 0.529 0.349 0.349 0.000 0.481 0.480 0.480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.494 0.000 0.991 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.440 0.440 -1.293 0.000 0.000 0.000 0.000 -0.600 0.000 0.529 0.529 0.349 0.349 0.000 0.481 0.480 0.480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.494 0.494 0.000 0.991 0.000 0.000 0.000 0.000 8.1654839 NA 6.2869033 10.1937945 11.5055947 7.1442157 10.9025377 8.4295883 8.1251820 NA 11.0324162 10.8521104 4.0095622 3.1864372 3.5303954 7.4604182 3.2933558 10.8599567 10.9190678 10.5810713 8.9413311 2.4859935 7.9798596 9.7202227 5.7897840 4.1864451 2.5734715 NA 10.6869026 7.1829713 5.4402014 8.4888190 4.8953947 9.5193927 10.5010706 3.0095622 9.2467240 -1.5141610 5.5412856 12.4535005 8.2224061 5.4746891 -1.5141610 -1.5141610 8.7327447 2.1864372 0.8079319 -0.5139550 5.2408905 6.3085429 1.8079319 10.4185879 -1.5141610 6.3868713 10.1526718 9.7685134 3.7339291 8.5840361 13.7169251 6.9657843 2.1864372 2.5734715 12.5094119 1.0709388 NA -1.5141610 -1.5141610 16.020608 6.122629 8.440200 15.155138 8.356800 10.839978 12.856215 12.806029 9.767279 11.056571 12.805535 11.005395 9.337753 9.762128 2.070973 8.512528 11.937859 11.132113 11.632573 8.741032 13.405564 8.342429 5.070965 9.464714 10.352124 10.898532 6.193364 5.886884 11.318696 5.440201 1.070939 10.502464 8.615287 9.646890 11.233568 9.474689 10.492681 8.030968 8.109885 13.194926 4.695459 11.696342 9.150451 10.245892 9.405612 11.754400 9.624916 10.926095 10.634798 9.025163 4.213923 8.353870 9.494762 11.544841 4.675827 11.562152 7.533128 10.357524 9.620430 7.850139 13.139689 9.553438 9.508372 12.546024 11.333844 2.392894 NA 10.682299 10.446368 9.942358 TCGA-BH-A0DE 62 0 NA 2372 breast stage iia t2 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 1 NA NA NA 1 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 22.2222222222222 14.8148148148148 0 40.7407407407407 22.2222222222222 10.6291661 9.8743922 11.1039553 9.2347104 8.7916773 8.3388915 9.2347104 9.9403623 11.0397417 13.2464342 9.4293858 10.4028284 1.2602666 13.5374380 3.5822188 10.5086188 5.5701502 8.7929764 9.3128639 12.7393182 NA 13.1956451 3.5333142 9.3359711 10.2654526 8.9017454 -1.3248164 12.1302752 8.4134257 2.8452492 7.9374280 8.1408998 -1.3248164 5.7087556 9.4883130 10.6876087 9.2649846 10.3173850 9.4599682 11.1586453 -0.3246357 10.3468745 14.8078130 7.7387557 9.9983882 10.9639111 11.4256216 5.4167992 4.7627953 9.0218472 11.8396118 0.9972563 11.1023843 5.5208245 6.6583272 5.0151853 10.7471309 11.4937158 10.2227099 11.8287271 12.6209601 8.5867253 11.0348085 10.8584384 10.9873654 10.7867951 4.3757762 11.6338861 9.2028105 -1.3248164 10.5960584 9.1439574 3.7632203 5.5208245 10.0724732 10.0190743 10.3870004 10.3688204 3.8046215 8.3565717 12.7264573 12.1760508 9.6816594 9.2546493 0.0240310 0.0370760 0.0140510 0.0140510 -0.0098185 0.0160060 0.0175440 -0.5366200 0.0157270 0.0157270 0.0168450 0.0000000 0.0000000 0.0218840 -0.5170200 -0.5170200 0.0148880 0.0148880 -0.0095426 0.0102850 0.0016642 -0.5199400 0.4481600 0.4481600 0.0065262 0.0065262 0.0065262 0.0293250 -0.5130000 0.0240310 -0.0124380 0.0140510 -0.0060904 -0.0098185 0.0160060 0.0160060 0.0175440 -0.5366200 -0.5366200 0.0129340 0.0129340 0.0157270 -0.0117490 -0.0019399 -0.0019399 -0.0019399 0.0000000 0.0000000 -0.5148600 -0.5170200 -0.5228700 -0.5228700 0.0148880 0.0148880 0.0148880 -0.0095426 -0.5299100 -0.5299100 0.0016642 -0.5355100 -0.5199400 0.4481600 -0.0055375 0.0065262 0.0065262 0.0293250 -0.5268600 0.0158660 0.0158660 0.000 0.000 0.000 -0.523 0.000 0.000 0.000 0.000 0.000 -0.061 -0.521 -0.516 0.448 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.527 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.523 0.000 0.000 0.000 0.000 0.000 -0.061 -0.521 -0.516 0.448 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.527 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7306158 NA 6.5701517 10.5844764 11.8315745 7.7410726 10.5900922 10.3375433 9.3139775 -0.3246357 13.0310286 11.3896755 6.8651579 6.5270829 4.1988948 7.7060007 4.6295315 11.6649053 11.0641579 10.5305912 9.2964696 4.6295315 8.0084886 9.7812418 6.5208229 9.4517664 0.9972563 NA 11.0135126 7.1057860 6.6583272 7.1949696 6.5518497 10.6041034 10.1925107 5.7942755 8.1969340 NA 7.7654459 12.4798678 8.7032395 8.3895789 0.2602666 5.8945025 8.1811448 NA 4.9232585 -1.3248164 5.9699540 6.3772296 2.8452492 9.7292593 0.2602666 9.8307841 9.9119456 9.7916773 5.9607364 9.9491290 12.1862211 8.2086631 3.3757762 3.4302184 13.0622063 8.0611957 NA 0.6753643 1.6753191 12.542563 3.960734 8.873778 13.537438 10.631710 10.133740 12.739318 12.368494 8.627346 10.446410 13.076346 11.250400 9.021847 7.932721 1.260267 7.683762 10.489515 11.0279286 11.3882902 7.2375761 13.9970840 9.1949696 6.9791142 8.9065545 8.5971743 10.3084286 6.8552423 5.8250809 9.4293858 8.0655023 2.6753417 10.3968598 7.5208237 6.1638167 11.2715231 10.2120662 10.1746811 8.4583316 8.4875109 11.3462109 5.0328855 11.4745057 9.2649846 11.0129553 9.3792369 11.1981601 10.2992149 10.2537060 10.3605202 8.5792152 0.9972563 8.8678112 7.9186265 11.8396118 4.4566945 11.1023843 7.0762127 11.2473230 10.7471309 7.3335445 13.3714859 9.8805156 10.1322011 13.0030965 9.9338994 -0.3246357 0.6753643 10.5549167 9.2299222 9.8282520 TCGA-BH-A0DG 30 0 NA 2041 breast stage iia t2 n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino 2 2 1 5 4 3 2 4 1 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 6.935946e-08 17.3913043478261 30.4347826086957 0 34.7826086956522 17.3913043478261 9.6158404 10.1149999 11.4845136 9.5175088 9.1661495 9.1225731 10.5121647 9.8245890 10.4872398 14.5863634 10.0381419 10.7618902 1.0597014 12.1769709 2.8252565 9.2226124 5.9077151 8.4910061 8.9176985 12.6452434 0.3227358 13.4118713 5.0597187 10.1512481 10.4817822 8.2155476 1.9076983 8.9892719 10.5326113 4.5957722 7.5451444 7.4758817 NA 5.4520353 9.6640853 10.3906344 9.9214247 10.2923782 10.1895156 11.2974055 5.0597187 10.8338456 14.9959137 8.1757701 10.2803377 11.5799432 10.5583672 4.6685276 5.8875375 9.3879436 11.0324101 0.7377733 11.2000360 5.9077151 6.6977919 5.4520353 9.8508804 11.7519842 9.9239036 11.9642016 12.5557723 7.6506784 10.8446794 10.5544170 10.8245890 11.0801418 4.6685276 11.5619526 10.6081541 1.5451282 10.4141872 8.8252523 3.7095664 6.2296418 11.6538554 10.2485536 10.4498864 9.5555725 3.9472453 9.9114664 12.6154569 11.9172320 9.8644938 9.5635431 0.67326000 0.59310000 0.00624810 0.00138680 0.00792200 0.00013863 -0.00336770 -0.00336770 -0.37110000 -0.00186310 0.01866300 -0.00716760 -0.00716760 -0.00166290 0.35920000 2.93350000 -0.39730000 0.01318500 -0.00346270 0.35920000 -0.00567570 -0.01972600 -0.40141000 3.65690000 -0.03408600 -0.03408600 -0.03408600 0.33992000 -0.41091000 0.00108040 0.00000000 -0.37932000 0.00778670 0.00944910 0.00013863 0.00013863 0.00182710 -0.00336770 -0.00336770 -0.00727090 0.00610900 0.94895000 -0.02329200 -0.01225300 -0.01225300 -0.01225300 -0.00716760 0.00166420 -0.00010846 0.35920000 -0.38448000 -0.38448000 -0.39196000 0.01474900 0.01474900 -0.00346270 0.10293000 0.10293000 -0.01357100 0.00497540 -0.01972600 -0.40506000 -0.00512270 -0.03408600 -0.03408600 0.52083000 -0.00373950 -0.02643600 0.02188400 0.000 0.000 0.359 0.359 -0.369 -0.369 0.000 0.103 0.000 0.000 0.000 0.352 0.352 0.000 0.000 0.000 0.000 0.000 0.592 0.340 0.340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.346 -0.346 0.000 0.000 -0.161 -0.161 0.000 0.000 0.359 0.359 -0.369 -0.369 0.000 0.103 0.000 0.000 0.000 0.352 0.352 0.000 0.000 0.000 0.000 0.000 0.592 0.340 0.340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.346 -0.346 0.000 0.000 -0.161 -0.161 8.3358419 0.3227358 5.8146043 10.4304049 12.5172010 7.4226434 10.6390334 9.6099640 8.9037514 4.6685276 12.1899019 11.9027607 9.0185602 6.0231910 3.8670761 8.6655672 3.9077175 10.7688013 11.7319660 11.0625325 8.9423606 2.0597014 7.0461287 10.4567503 7.5643378 7.4758817 1.7377733 NA 11.0975389 6.5769937 8.3598413 8.1365329 6.2216045 10.0955008 10.7271839 4.1301072 8.1556420 0.3227358 8.5435334 12.7395494 8.5675120 8.0709447 NA 1.9076983 7.9738035 NA 4.1972206 -0.2622267 6.0597165 3.4382263 3.7377841 10.5750231 2.9077175 8.6386560 10.6112334 9.6846957 5.4382296 10.1471802 12.9017535 8.8410771 4.1972206 4.4382263 11.5738397 3.4926736 NA NA 1.9076983 12.722614 5.668528 8.453751 12.176971 10.469533 10.755642 12.645243 12.041142 10.813603 10.293337 13.077570 10.262821 9.387944 9.868360 -1.262227 10.385248 11.519354 11.660188 12.580729 6.431277 12.950588 8.592658 6.846314 9.178659 7.396001 10.741370 7.462303 9.698515 10.038142 5.825251 4.668528 11.075690 6.861911 8.361707 12.745868 10.525692 10.755642 7.879896 8.635635 11.209465 7.326504 11.065171 9.921425 10.947852 10.099185 11.095341 10.391978 10.026655 10.977686 8.807910 -1.262227 9.465387 7.629573 11.032410 7.538689 11.200036 8.760157 11.051846 9.850880 7.213523 13.482781 9.618138 9.907714 12.260861 10.792394 5.956958 1.737773 9.270145 10.362585 9.670742 TCGA-BH-A0DH 63 0 NA 1156 breast stage iib t2 n1a m0 female 2007 NA yes infiltrating ductal carcinoma 3 white NA 1 1 3 2 4 2 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 1.733986e-07 17.2413793103448 41.3793103448276 0 17.2413793103448 24.1379310344828 9.1438311 9.5030911 11.2777961 9.2582002 8.7651276 9.4910686 9.1409486 8.7424866 9.3600396 13.4721760 9.5030911 10.5902018 NA 13.2564258 3.2340567 8.5105545 6.3517538 8.0331454 9.6630042 12.9115662 1.5901948 13.7281935 6.0820553 10.1896451 10.8030021 8.1428708 1.1751733 8.6803142 10.2692419 1.5901948 8.3813647 6.1137630 -0.4098531 5.7500732 9.8534710 10.1152332 11.1891847 11.4099817 9.3282941 10.8939825 12.2427107 9.9565240 14.0547475 6.2539023 11.8064929 11.1600574 10.7227015 4.0496308 4.4970950 8.4103805 11.5312494 NA 11.4309797 6.1524451 5.7701102 3.8381248 9.8045209 11.3590064 10.2621851 12.8136756 12.5995930 8.8779141 10.1863915 9.9835922 11.1896498 10.1868574 3.7996572 11.9329709 10.5613860 NA 10.0372850 8.8178177 2.6776661 5.0496351 10.5238924 9.1685743 9.5845552 10.0398663 2.6776661 9.4023790 12.2023792 11.1706959 9.5392990 9.8876913 0.00000000 0.00000000 0.00416320 -0.00498440 -0.00083160 0.00069327 0.68589000 -0.78555000 0.00235810 0.00235810 0.73891000 0.01098200 0.01098200 0.00563190 0.00638710 0.00638710 -0.77634000 -0.00360110 -0.77532000 0.00402430 0.02037300 0.01181800 0.01181800 0.01181800 0.00221930 0.00221930 0.00360760 0.03608800 -0.78732000 0.00000000 -0.79620000 -0.78479000 -0.00083160 0.03990200 0.00069327 0.00069327 0.68589000 -0.78555000 -0.78555000 -0.00124730 -0.00124730 0.02426800 0.01377200 0.01377200 0.00291330 0.02496900 0.01098200 0.01098200 0.00563190 0.00638710 -0.78488000 0.03947800 -0.77634000 -0.00360110 -0.00360110 -0.77346000 -0.00262200 0.01838300 0.01433000 -0.77634000 0.01181800 0.01181800 -0.77073000 -0.00526100 0.00360760 -0.78007000 0.01810300 -0.78108000 -0.78766000 0.000 0.000 0.000 0.000 0.000 0.000 -0.773 0.000 0.000 -0.063 -0.776 0.000 0.000 -0.778 -0.778 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.788 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 -0.158 -0.158 0.000 0.000 0.000 0.000 0.000 0.000 -0.773 0.000 0.000 -0.063 -0.776 0.000 0.000 -0.778 -0.778 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.788 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.686 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 -0.158 -0.158 9.0112147 NA 4.6345933 10.8549376 11.1966070 6.3269418 10.1891847 9.5806816 9.0341813 NA 12.4763746 11.9495176 4.1751653 0.5902427 3.4970886 8.6934897 3.3450841 10.4624918 11.4260548 10.1088549 9.5253667 0.5902427 7.4574802 10.0059435 6.4970918 6.6345962 -1.4096615 -1.4096615 10.9016663 5.5443988 7.6263756 7.7348600 6.9910808 9.9716420 9.8051280 4.3975566 8.4850194 NA 6.3316694 12.0093719 7.6291205 7.2268264 -0.4098531 -1.4096615 8.4590242 NA 4.4728452 NA 4.1751653 2.5901948 2.9825282 10.6495462 -1.4096615 7.6987262 11.1908116 9.6441276 4.4970950 10.0196085 12.4053849 7.7194847 1.9121133 3.2340567 11.0752764 1.5901948 0.1751733 NA 2.2906308 13.3504773 4.5902008 8.8129968 13.2564258 9.5516516 10.6703531 12.9115662 12.9561824 9.5452703 9.8202222 12.6935715 7.8262161 8.4103805 8.2067507 -0.4098531 7.6291205 10.4376507 10.606314 12.388268 5.358386 14.260415 8.990014 5.290642 9.485020 8.554543 9.814101 6.544399 6.856988 9.503091 7.690864 1.912113 10.998531 5.276701 6.569541 9.587381 10.282381 10.738678 6.739949 9.049633 13.691726 7.125478 10.394038 11.189185 10.720129 9.879644 9.282817 9.273196 10.454001 10.625688 8.631861 -1.409661 8.244802 5.550550 11.531249 8.351753 11.430980 4.965239 9.794773 9.804521 7.642770 13.570207 10.121583 9.887691 12.447308 10.142871 NA -1.409661 10.401175 10.708494 9.598630 TCGA-BH-A0DI 63 0 NA 912 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 2 2 1 5 4 3 3 4 4 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.629541e-07 2.427581e-07 27.5862068965517 41.3793103448276 3.44827586206897 10.3448275862069 17.2413793103448 9.9966598 10.5909677 11.6881467 9.4589651 8.6513976 9.0268136 9.8045168 9.8204952 11.1737290 14.3025011 10.5339649 10.8906007 -0.2689906 13.1933552 2.9009730 10.6899598 5.8499868 8.5222076 7.9574567 11.9947540 0.7310094 12.8579911 5.4452897 9.5367886 10.1996687 8.3402235 -1.2688168 9.7154631 9.4236601 2.0529723 9.2188848 7.4175454 -0.2689906 5.7754378 9.8788856 9.8369533 9.3703853 11.5882482 9.4262729 10.5070664 1.7310529 8.9258016 15.4574890 7.2845586 10.0359664 10.8744279 11.2178797 5.2546054 5.7971349 11.2067781 12.2726253 NA 11.5496269 6.9694498 5.8499868 6.1319249 10.2148604 11.5804498 10.6390619 12.5577918 12.5250543 8.5335610 10.9661614 10.5168650 11.3360611 11.1695767 4.5124039 11.4227882 11.2997134 -0.2689906 10.6228283 8.8224800 3.1240468 5.4725105 10.2653476 9.8972077 10.2546067 9.3337435 4.8395666 10.9928458 14.1950479 12.0764499 9.7366693 10.0204872 -0.00054247 0.30603000 -0.33172000 3.65690000 0.00417520 0.27207000 0.00459200 0.00348070 3.65690000 0.01480300 0.34975000 -0.01048300 -0.01957700 -0.30978000 2.31390000 0.22098000 -0.00068106 -0.00068106 -0.02259500 0.00667730 0.01155100 -0.32157000 -0.00870270 0.31099000 -0.01049600 -0.01049600 -0.01049600 0.00806870 -0.00054247 -0.00054247 -0.00662080 -0.32519000 -0.32797000 -0.32390000 0.26547000 0.24515000 0.00459200 -0.32866000 -0.33259000 0.00118130 -0.33940000 -0.31738000 -0.32076000 -0.32076000 0.00306420 0.00306420 -0.01957700 -0.01957700 -0.30978000 -0.02204600 -0.32206000 -0.31341000 -0.00068106 -0.00068106 -0.00068106 -0.02259500 0.00860700 0.00860700 0.01532000 0.00084392 -0.32157000 -0.00870270 0.00834710 -0.01049600 -0.01049600 0.00264770 0.00751200 -0.00178940 0.00653820 0.000 0.000 -0.073 0.237 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 0.000 0.000 0.000 0.000 -0.299 0.000 0.010 0.323 0.265 0.265 0.000 0.000 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 0.000 0.000 0.000 -0.073 0.237 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 0.000 0.000 0.000 0.000 -0.299 0.000 0.010 0.323 0.265 0.265 0.000 0.000 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 0.000 8.1863718 3.9404957 5.9109533 10.7412231 11.3514936 6.6790620 11.1622811 10.0350252 8.7168153 5.1573106 12.0961368 12.1575191 3.8185029 4.0885996 3.9009730 8.0819840 4.1573106 11.7175978 11.6499079 10.1552110 8.5859131 1.7310529 8.1276493 10.5400089 7.4210423 6.9502129 -0.2689906 1.3160299 10.6924944 5.6258637 8.0001713 8.8641868 6.7253976 9.3803009 9.7917407 4.2856316 8.3820966 NA 8.2565654 12.9590366 7.5383993 8.4538521 -0.2689906 -0.2689906 8.0552255 1.3160299 4.4314826 1.3160299 6.1233620 4.4314826 4.1573106 10.3905947 2.1904884 9.2437852 10.3879164 9.9270320 5.5383985 9.8686763 12.5454269 9.2913775 3.5890204 4.5890264 10.5800588 4.1233599 NA 1.3160299 2.0529723 12.361581 5.613688 8.276009 13.193355 10.205258 10.570642 11.994754 10.762057 9.425403 10.812195 13.316418 10.649908 11.206778 8.522208 NA 7.535176 10.472090 11.869636 12.232135 7.849986 14.180708 8.595231 6.725398 9.006005 7.535176 10.375586 7.148898 7.452144 10.533965 7.643934 3.190473 10.809863 5.818508 6.743502 12.514759 10.390595 10.363131 7.823802 8.648417 11.510148 6.708325 10.499982 9.370385 10.522615 9.913439 10.246252 10.249698 9.800494 10.924878 8.771334 9.091892 9.472444 7.959094 12.272625 7.592132 11.549627 9.070895 11.084699 10.214860 7.270204 14.123932 10.077004 10.167236 12.967806 10.590191 2.900973 NA 10.113669 10.259987 9.668418 TCGA-BH-A0DK 49 0 NA 423 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white NA 2 2 1 2 2 2 3 4 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.115464e-06 4.855162e-07 13.3333333333333 18.6666666666667 2.66666666666667 33.3333333333333 32 9.5743593 9.6723044 11.4510720 9.2681015 8.2318457 9.0781618 9.3499785 9.5424991 10.5559316 13.8786790 9.3177830 10.6955901 1.1700532 11.5927648 2.5485846 9.6490411 6.8979894 8.4084741 9.3834166 12.4176408 2.1700853 13.4218475 5.0180644 9.7363136 10.3589053 6.1335430 -1.1520031 10.6971552 10.1507801 0.4330663 7.9978885 7.9061330 3.7550371 6.4027307 9.3726829 10.5879218 9.4738500 9.9169195 9.6130128 10.8867173 1.6554892 10.5059062 15.1968521 8.4961391 10.6534820 11.1046447 10.5210084 4.5485784 4.9142296 9.5786114 11.4854453 NA 11.4550090 6.5896077 7.2056936 4.8254193 9.9047790 11.6740937 10.1723217 12.2913438 12.6097963 8.1427621 10.9573189 10.2974755 11.1860418 10.9582982 4.3399925 11.4928988 11.5946555 0.8481572 10.3756182 9.0673096 2.3578335 7.5205668 10.9302902 9.7684940 10.0533236 9.5072452 3.8925367 9.7602820 12.8519226 12.5279511 9.4765866 10.5263012 0.52485000 0.51455000 0.00708260 0.52241000 -0.00609040 0.00763920 0.00000000 -0.00825110 0.01279500 0.00507120 0.00507120 0.01140000 0.01042400 -0.52798000 -0.53073000 -0.53073000 -0.52961000 0.00124810 -0.54121000 0.01600600 0.02076300 -0.52736000 -0.52736000 1.26730000 0.00638710 0.00638710 0.01042400 0.03369000 -0.52440000 0.00765350 -0.00788630 -0.54260000 0.02426800 -0.00609040 0.00763920 -0.00062645 0.00000000 0.00000000 -0.00825110 0.01070300 -0.04915400 0.01614600 -0.53297000 -0.53297000 0.00652620 0.02398700 0.01042400 0.03990200 -0.52798000 0.01167900 -0.53073000 -0.53073000 -0.52961000 -0.00640350 0.54294000 -0.53666000 -0.00133810 0.01363200 0.01488800 -0.52092000 -1.04350000 -0.52736000 0.01600600 0.00638710 0.00638710 0.03369000 0.01363200 -0.51722000 0.03199900 0.000 0.000 -0.528 -0.528 0.000 0.000 -0.537 0.000 0.000 0.000 -0.521 -0.527 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.533 0.000 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 -0.537 0.000 0.000 0.000 -0.521 -0.527 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.533 0.000 0.000 0.000 8.7323116 1.6554892 6.2744052 11.0252492 12.0586603 7.2005377 11.2633548 10.4795547 8.9838504 5.8481422 12.2531497 11.7468937 6.6998903 3.7061216 3.6555007 7.9696749 4.7061216 11.6427601 11.2858933 10.7703539 9.3697417 3.2404517 8.1473494 10.1536330 8.7505164 10.1421875 4.6295023 NA 10.5433694 6.6683206 8.7185058 7.3075724 5.9249574 10.0824497 10.3243811 5.3717017 8.6794484 -0.1518428 7.5726548 12.6226194 6.9927990 9.4683609 -1.1520031 2.5485846 7.8898002 NA 5.1335430 0.4330663 7.7994260 4.7698616 4.9142296 10.5302580 0.4330663 9.6055312 10.4554715 10.3544487 7.2744061 10.5879218 13.5755299 9.2447460 5.6030299 5.2404594 13.4719084 3.6555007 -1.1520031 3.3075742 2.7550371 12.195260 6.291084 8.238310 11.592765 10.277025 10.501434 12.417641 9.978068 8.663524 10.369251 13.314728 11.550747 9.578611 8.928959 1.433120 7.201288 11.539449 11.2242665 12.3586581 5.9356035 13.3223516 9.0829585 8.0697285 9.4065620 7.7307839 10.2805996 8.2972900 9.0392004 9.3177830 7.8788081 1.4331197 10.3198164 5.9356035 7.6624355 11.5959146 10.5925546 10.9696747 8.0054881 8.4160974 11.9809622 8.0280503 10.1512712 9.4738500 11.1122905 10.0907198 10.3504758 10.5653892 9.5743593 10.9873727 8.9474891 0.4330663 9.1070251 7.7565937 11.4854453 8.9915244 11.4550090 7.0130479 11.0972546 9.9047790 6.9461729 13.9008790 10.3039821 9.8822524 12.3265316 11.1782177 6.7847788 1.1700532 9.9683791 9.6538851 9.3489830 TCGA-BH-A0DL 64 0 NA 2381 breast stage iia t2 n0 m0 female 2007 NA yes other, specify 0 white not hispanic or latino 3 3 1 NA 1 1 5 5 2 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.144431e-06 1.733986e-07 21.0526315789474 23.6842105263158 2.63157894736842 18.4210526315789 34.2105263157895 10.0455211 9.5628741 12.0452048 9.6815650 8.5082452 10.0463640 11.5353678 10.6497477 11.2306369 13.3289545 10.3307287 10.8493785 0.8898629 10.9695665 1.7643462 11.3926913 5.0328194 9.0681094 9.0429893 4.7967483 0.3048615 10.0854367 8.0446777 9.3190360 10.9214459 6.6536247 0.3048615 10.2345253 11.0094491 1.1122331 9.7684214 8.9378922 -1.6952553 5.9122283 9.5786925 10.0264234 8.9878916 10.7917320 9.2378500 10.8059878 -0.6950218 9.0763865 14.4998462 7.6981372 9.3696399 10.5158727 9.7174669 2.4748254 NA 10.0387598 12.4629544 -0.1101371 11.2057638 5.0053371 7.4495556 5.0191414 10.5459864 11.9615453 10.2144152 11.2973044 12.8877446 4.8440542 10.7308997 10.1717586 11.1712100 11.7323408 4.8126933 12.9661184 8.8077288 -0.1101371 9.6596973 10.0005603 3.3138843 5.2706822 10.8764127 9.4463656 9.8742780 9.9319749 -0.1101371 10.4562308 13.1122016 12.5016528 9.7735210 9.7836667 0.5478800 0.5478800 -0.2896400 1.6138000 -0.2461800 0.6095500 -0.1093300 -0.1093300 0.2601200 0.8102500 0.8102500 -0.0776110 -0.0776110 -0.2930100 1.1595000 -0.0310860 0.4947600 -0.0438730 -0.2974800 0.2004500 0.3652600 -0.2241500 -0.2241500 -0.0280810 -0.0797420 -0.0797420 -0.0797420 0.3339900 0.4356700 0.5478800 0.2039600 -0.2896400 0.2175200 0.0417410 0.0000000 0.0000000 -0.1093300 -0.1093300 -0.1093300 0.2084000 0.1286600 -0.3002800 -0.2815600 -0.8207300 -0.0818710 -0.0818710 -0.0776110 -0.0776110 -0.3002800 -0.1534900 -0.0310860 -0.0310860 0.0228650 -0.0438730 -0.0438730 -0.4680500 0.2004500 0.2004500 0.2760000 0.2157600 -0.2241500 -0.2241500 -0.0088526 -0.0797420 -0.0797420 0.3339900 -0.0645080 -0.3129500 -0.5189700 0.000 0.000 -0.293 -0.293 0.000 0.000 -0.282 0.200 0.276 0.216 0.216 -0.185 0.000 0.000 0.000 0.000 0.000 0.548 0.548 0.334 0.334 0.000 0.200 0.204 0.204 -0.260 0.317 0.176 0.000 0.000 0.000 -0.109 -0.109 0.208 0.208 -0.113 0.810 0.000 0.000 -0.182 0.076 0.000 0.000 -0.293 -0.293 0.000 0.000 -0.282 0.200 0.276 0.216 0.216 -0.185 0.000 0.000 0.000 0.000 0.000 0.548 0.548 0.334 0.334 0.000 0.200 0.204 0.204 -0.260 0.317 0.176 0.000 0.000 0.000 -0.109 -0.109 0.208 0.208 -0.113 0.810 0.000 0.000 -0.182 0.076 8.3034876 NA 3.1628706 11.5767977 11.7535296 6.9104137 12.0905538 8.6011824 8.2540965 NA 12.2068010 11.7424619 1.8898629 NA 4.2117910 8.0429895 4.2356352 12.5842900 12.1010380 10.9541532 8.9559486 5.3161240 10.0652011 10.0480484 7.1721755 8.3244880 9.3506566 NA 9.5522312 2.3048906 8.2267378 8.8575662 4.9913994 9.7564431 10.6069647 4.5716829 8.9913974 3.5903026 6.6177804 12.2720332 8.9196067 7.8027490 0.6268596 8.3897053 8.6514109 NA 5.5045695 NA 6.4186386 3.4358286 3.3492945 10.6208956 -1.6952553 11.1222804 10.5894320 9.7514634 5.3161240 9.6651954 14.6284796 9.1852459 6.5433010 4.3492945 9.9469487 NA NA 6.6755845 3.5528197 13.3361373 6.8747527 8.2072721 10.9695665 10.0952455 11.1248765 4.7967483 9.7524969 8.9992548 11.5917161 13.5370556 11.1766098 10.0387598 7.0463645 0.6268596 8.1122518 11.0664483 10.254724 11.619339 2.764325 15.709655 9.794745 10.170244 8.947851 9.469804 9.580771 7.092799 9.230451 10.330729 3.764325 -1.695255 11.337287 8.762278 9.797842 12.785561 10.266347 10.523158 8.830418 9.189067 8.229710 8.287891 11.031822 8.987892 10.968900 9.640846 11.270862 11.477481 11.424811 10.455279 9.058949 NA 9.743086 6.464768 12.462954 9.748877 11.205764 4.552826 10.942880 10.545986 8.124086 14.069587 10.840415 10.846962 13.325183 9.939708 4.747839 -1.695255 10.889625 10.466974 9.412114 TCGA-BH-A0DO 78 0 NA 1644 breast stage i t1c n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 3 NA NA NA 3 3 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.733986e-07 26.6666666666667 20 6.66666666666667 26.6666666666667 20 10.7360844 9.7048561 11.9273386 9.5581048 8.2662665 8.7732899 11.0586302 9.4590184 10.7942117 12.8810810 11.3616602 10.4409374 0.5468574 12.9770034 3.6343377 9.6651698 7.5581046 8.5953645 10.5327195 13.3052569 1.7168153 13.7794859 7.5636859 9.5523267 10.9562685 5.6343406 NA 8.4637573 7.3510090 4.2747984 7.4687185 7.4141567 1.3542265 3.5468821 10.3546350 10.4761360 10.3939349 11.4825951 10.3610595 12.0714193 8.1052983 12.0661452 14.3482575 6.8724976 10.3534272 11.7326822 11.3724327 5.8414977 3.6761658 8.9219171 12.1031441 -0.4530438 10.8259077 4.1318364 5.5692450 3.9731429 10.2082103 11.9611664 10.4405583 12.7615002 12.9647960 8.3970645 10.8908960 10.7076692 11.4513240 11.3308989 5.1467896 11.9626193 11.8755525 0.1318528 10.0850665 8.8264881 4.2761616 3.5912725 11.0286770 10.7810962 10.2442795 9.9583886 4.0387347 10.8130784 13.6585023 12.4367617 10.2399288 9.7477761 0.76523000 0.76523000 0.00000000 0.00000000 0.00097064 -0.00055444 -0.00429290 -0.00429290 -0.00456950 -0.00456950 -0.00719580 -0.00589960 -0.00012099 0.39214000 0.38899000 0.38899000 -0.00816240 -0.00816240 -0.00097017 0.00138680 -0.00235530 -0.01807800 -0.01807800 -0.01807800 0.35218000 0.35218000 0.35479000 -0.01023200 -0.00719580 -0.00719580 0.00277450 0.00000000 0.00097064 0.00069327 -0.00055444 -0.00124730 -0.00429290 -0.00429290 -0.00138580 0.39562000 0.39562000 -0.00456950 0.00041593 0.00041593 0.00041593 -0.01387600 -0.00012099 0.00597000 0.39214000 0.38899000 0.38899000 0.38899000 -0.00816240 -0.00816240 -0.00816240 0.00152550 -0.00899060 -0.00691950 -0.00235530 -0.43102000 -0.01807800 -0.01807800 0.00666530 0.33124000 0.34616000 -0.00110870 0.00680440 -0.01464100 -0.01464100 0.000 0.000 0.389 0.389 0.000 0.000 0.000 0.000 0.000 0.387 -0.431 0.000 0.000 0.000 0.000 0.352 0.352 0.000 0.765 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.396 0.396 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.389 0.389 0.000 0.000 0.000 0.000 0.000 0.387 -0.431 0.000 0.000 0.000 0.000 0.352 0.352 0.000 0.765 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.396 0.396 0.000 0.000 0.000 0.000 0.000 0.000 8.3622608 NA 4.9044311 10.4988907 10.8983690 7.6178303 11.6700290 9.1938501 9.0064425 -1.4532413 11.8215469 10.5394123 3.3542265 2.4537809 4.2473199 8.4462343 3.1318364 9.7168025 12.0679872 11.1419019 9.1252502 6.0937714 7.5468775 10.1907337 6.5126615 7.3638614 0.1318528 NA 11.2278963 6.5068796 7.0063092 8.1816885 6.8911737 10.5621916 11.0284247 5.4537678 8.4746555 NA 8.3477773 13.2367664 8.9657843 7.2950700 NA 2.7167934 8.0899096 NA 3.9044263 2.4537809 4.5468759 7.4156074 4.0387347 10.0109127 1.1318528 9.1615874 10.7013792 9.6323500 4.5241577 9.8113201 11.0327068 7.7948051 3.2473199 3.3017632 11.9648619 1.8688053 -1.4532413 1.1318528 0.5468574 13.1448137 4.9219171 8.3923677 12.9770034 10.5709783 10.9340871 13.3052569 12.7918359 9.7205547 10.9175650 13.3594560 10.5806447 8.9219171 9.3726313 0.8688448 7.2984219 11.8184865 11.118156 11.903467 8.086036 14.052533 9.224597 6.247318 8.375014 7.658013 10.358529 5.868805 6.489392 11.361660 5.512663 5.038730 10.985410 7.363861 4.818155 12.490491 10.310505 11.105537 8.310090 8.124306 13.697141 6.546877 12.489001 10.393935 10.237749 10.202408 11.290029 9.694083 10.077284 10.680662 9.451512 NA 9.478206 7.260711 12.103144 7.462757 10.825908 5.804265 10.842354 10.208210 7.208656 14.114475 10.092807 10.935433 13.230311 10.819507 1.716815 NA 10.618675 10.624027 10.178509 TCGA-BH-A0DP 60 0 NA 476 breast stage iib t3 n0 (i-) m0 female 2009 NA yes infiltrating lobular carcinoma 0 white NA 2 2 2 1 4 3 4 3 5 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.427581e-07 23.0769230769231 11.5384615384615 0 38.4615384615385 26.9230769230769 10.7055917 9.7399868 11.7788700 9.5260066 8.2515193 9.4765184 9.8187883 9.8126126 10.3481438 11.9581891 11.4293139 10.4782534 5.5459992 12.6480821 3.4216677 10.7732276 6.5787138 8.4162495 11.4089907 12.8920440 0.3627785 14.0250366 7.4713005 9.2672303 10.4171544 5.7320114 NA 12.3379136 8.7890409 2.8652854 7.7464807 8.1375635 -0.2221280 4.9872663 9.8036454 10.0844450 10.1544817 12.1613830 9.6334608 11.5550690 4.6847065 10.6283912 14.7676295 8.0769989 9.7399868 10.9192823 11.3244670 5.4071692 2.8652854 9.1042431 12.1066289 NA 11.5347869 6.8599633 6.3400566 5.1353666 10.1972473 12.2263172 10.8449119 12.6463469 12.6440301 8.7290983 11.3309630 11.0764491 11.3006404 11.1031191 4.9477410 12.2911712 11.1917060 -1.2222962 10.4333445 9.0304790 2.8652854 6.0906968 10.6661764 9.7876422 9.6741462 9.9464858 4.3627785 10.0672563 13.3593674 13.4686847 10.3179418 9.7536617 1.29410000 1.29620000 -0.01381500 -0.01381500 -0.02862800 0.31787000 -0.32867000 -0.32867000 0.31610000 0.31610000 0.31135000 -0.01298900 -0.01876500 0.24078000 0.24078000 0.24078000 -0.01519100 -0.01519100 -0.35954000 -0.00318590 -0.34721000 0.12668000 0.12668000 0.12668000 0.00555290 0.00555290 0.00555290 -0.00083160 0.00000000 -0.00885260 0.00332990 -0.01381500 -0.02862800 -0.02862800 0.31787000 0.31787000 -0.32867000 -0.32867000 -0.32867000 0.60449000 0.60449000 0.31610000 -0.05320600 -0.05320600 -0.05320600 -0.05320600 -0.01876500 -0.01766600 0.24078000 0.24078000 0.24078000 0.24078000 -0.01519100 -0.01519100 -0.01519100 -0.35954000 0.00374650 0.00374650 -0.34698000 -0.37887000 -0.36318000 0.12668000 0.28564000 0.00555290 0.00555290 -0.00097017 -0.34893000 0.00583090 0.00583090 0.000 0.000 0.241 0.241 0.000 0.000 -0.360 0.000 -0.347 0.632 -0.379 -0.362 -0.235 0.285 0.285 0.000 0.000 0.000 1.294 0.000 0.000 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.318 0.318 -0.329 -0.329 0.604 0.604 0.316 0.316 0.000 0.000 0.000 0.000 0.000 0.000 0.241 0.241 0.000 0.000 -0.360 0.000 -0.347 0.632 -0.379 -0.362 -0.235 0.285 0.285 0.000 0.000 0.000 1.294 0.000 0.000 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.318 0.318 -0.329 -0.329 0.604 0.604 0.316 0.316 0.000 0.000 0.000 0.000 7.9994008 3.0257376 4.7550959 10.4786868 11.0063318 7.7242232 11.1045241 9.1573762 8.8999556 2.2372578 11.1517664 11.0593729 2.9477410 4.1701334 3.2372425 8.2331408 3.8652755 10.9345288 11.4085358 11.0227721 9.1829552 7.4886202 7.2974501 10.0672563 6.6481778 7.1571923 2.0997328 NA 11.4634385 7.8941575 7.1265414 7.9823850 7.4360252 10.2935480 10.8682569 6.0997412 8.7320100 NA 8.4270698 13.0697038 7.6726311 7.3514605 -1.2222962 5.4360252 8.6527951 -0.2221280 5.1528527 -1.2222962 5.3324036 5.9536377 3.4216677 10.5234881 0.7777879 8.9109560 9.9872670 9.8863381 5.0066302 10.1701311 12.2669090 8.9750303 2.7778089 3.3013828 11.7072571 1.5851548 NA 2.0997328 2.5851789 13.181145 5.135367 8.322778 12.648082 9.974416 11.135641 12.892044 12.340175 9.338146 10.695932 13.721382 11.234425 9.104243 9.225930 1.947741 6.849276 11.632682 11.033727 11.659119 7.830381 13.891594 9.046940 6.927561 8.827662 8.425272 9.998259 7.216605 5.635795 11.429314 7.907097 4.063218 10.571011 8.666557 6.600289 11.472824 10.710398 10.810204 7.843903 8.086153 13.025370 5.927560 11.303056 10.154482 10.649334 9.950241 11.231599 9.806410 10.311143 10.686957 9.129857 1.585155 9.421210 7.362363 12.106629 6.702626 11.534787 7.734916 10.171354 10.197247 7.396420 14.577728 10.051609 10.831061 13.122942 10.285113 1.099766 NA 10.332882 10.255066 9.505734 TCGA-BH-A0DQ 42 0 NA 98 breast stage iib t2 n1 m0 female 2009 NA yes infiltrating ductal carcinoma 1 white NA 1 2 1 1 NA NA 1 4 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.733986e-07 20.8333333333333 8.33333333333333 0 41.6666666666667 29.1666666666667 10.878598 9.934796 11.798933 9.047722 8.334695 8.824030 9.829872 10.111998 10.173532 14.113362 10.325075 11.073668 0.293959 12.090529 3.708982 9.819469 5.674771 8.431793 7.126839 12.415266 0.293959 13.546072 3.615875 10.054851 10.534342 6.541876 1.516318 8.611361 10.052727 2.878902 7.725794 7.876404 NA 5.232549 9.593920 9.668988 10.604561 10.556435 9.572398 10.880163 10.558782 11.033448 14.972475 7.593676 9.752013 11.716539 10.671159 5.338342 5.898811 9.166367 12.540590 NA 11.440941 7.147778 5.101301 4.686265 9.985110 11.941707 10.499742 12.279909 12.522166 8.769682 10.724052 9.727186 11.441365 10.977235 4.323694 11.808169 11.698913 1.293959 10.593538 8.895100 2.412754 4.975772 10.884224 9.045492 9.844054 9.799098 3.352843 8.872635 12.914626 11.496684 10.023003 9.699799 0.01373200 0.61063000 -0.00401620 0.62811000 0.01880300 0.01223700 0.60539000 -0.04807200 0.01474900 0.01474900 0.36374000 -0.00282460 -0.00180140 -0.00050346 -0.00050346 -0.00050346 -0.65529000 0.61299000 -0.63472000 0.01265500 -0.00912860 -0.01092200 -0.01092200 -0.01092200 -0.12356000 -0.12356000 -0.12356000 0.65332000 -0.02151000 0.01373200 -0.01697900 0.00374650 0.01283700 0.01734600 0.01223700 0.04315700 0.60539000 -0.63906000 -0.04807200 -0.00883240 -0.00166290 0.01474900 -0.47268000 -0.47922000 0.45292000 0.45051000 -0.00180140 -0.00180140 -0.00050346 -0.00050346 -0.66420000 -0.66420000 -0.65529000 0.61299000 0.61299000 -0.63472000 -0.02621000 -0.00097017 -0.00912860 -0.01019300 -0.01092200 -0.01092200 -0.65015000 -0.12356000 -0.12356000 0.64268000 0.01181800 -0.69730000 -0.70854000 0.000 0.000 0.000 0.000 -0.655 -0.042 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 -0.124 -0.124 0.000 0.000 0.000 0.581 0.000 -0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.020 0.453 0.000 0.000 0.000 0.000 0.000 0.000 -0.655 -0.042 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 -0.124 -0.124 0.000 0.000 0.000 0.581 0.000 -0.697 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.020 0.453 0.000 0.000 8.5685205 NA 6.8738932 10.8558727 11.1223494 6.2804349 10.4011655 9.5558083 9.0266133 3.2939443 11.3399355 12.1983133 4.4638709 4.8382711 1.2939590 8.4638734 4.4638709 10.8230535 11.4307260 10.1877555 8.9074309 1.8789215 8.0554994 9.9769430 6.3671981 8.9245189 3.9184435 NA 10.8898274 7.1098651 8.6470954 7.8913803 6.8888954 10.7956728 10.2764667 3.1684174 8.4688741 NA 7.4470783 12.0351345 7.9184393 8.3972361 -0.2910624 0.2939590 8.1268387 5.2788397 6.0926895 -0.2910624 4.1684174 5.1379338 2.7964524 10.9548356 1.2939590 8.3989839 11.0446554 10.1897761 5.3814114 9.4512954 12.5807949 8.0970034 2.5163430 3.6631852 9.3227754 3.1012971 NA 3.1684174 2.7089818 13.006189 5.012765 8.376098 12.090529 9.621127 10.791800 12.415266 12.033729 9.155035 10.215293 12.890060 9.368090 9.166367 8.562295 1.708982 7.648565 11.458017 11.351940 12.183326 6.639723 13.039759 9.170465 5.975772 8.952160 8.753380 10.744032 6.263575 8.745160 10.325075 7.147778 3.615875 10.189776 6.331037 7.013269 11.024985 10.057714 10.584735 9.042141 9.129999 11.668263 5.168417 11.802644 10.604561 10.457598 9.728577 10.338798 10.363622 10.636023 10.741720 8.697671 NA 9.034752 7.615877 12.540590 5.503403 11.440941 8.079673 10.082395 9.985110 7.660270 13.471005 10.566967 10.069833 12.244626 10.525970 1.293959 -1.290886 10.667176 9.741720 9.437757 TCGA-BH-A0DS 71 0 NA 78 breast stage iiia t2 n2a m0 female 2010 NA yes infiltrating ductal carcinoma 8 white NA 2 2 2 2 4 2 4 4 5 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 36.3636363636364 18.1818181818182 0 18.1818181818182 27.2727272727273 10.4819495 9.4688142 11.3602439 8.1773513 8.6962248 9.0446250 9.5337942 9.5788678 10.4707678 11.9280681 10.9139580 10.1981356 6.6760473 12.9276236 4.6417772 10.1904507 7.9300217 8.1162629 10.1030989 13.2343058 1.7486759 14.1721832 4.6417772 10.0470231 11.1653389 9.1845112 0.9413317 8.9328590 9.9027869 2.4007565 8.2922765 6.1797419 0.5262692 4.8955353 9.5178215 10.2010804 10.4291772 10.3744009 9.5384586 11.0475729 5.2811864 9.8101597 14.6618219 5.6780775 9.7527038 11.2261613 10.6022244 3.4007702 6.2632654 8.7773875 11.8652217 NA 11.2942082 6.0498616 6.0287990 5.8239811 10.2789591 11.3920329 11.0651352 12.7472825 12.4487602 7.9637047 11.5479737 11.0218749 11.1308529 10.4411830 2.6417772 12.2946218 10.5919402 NA 10.3539070 9.4431744 3.1930620 5.2451191 10.1773514 9.9164686 9.5234792 10.8455954 3.8482273 10.6819612 12.9230828 11.3899697 9.6031152 9.8459717 1.4328000 1.3275000 0.3624800 0.3603500 -0.0951200 0.2452900 -0.0748110 -0.5539700 1.6685000 1.6685000 2.6954000 0.5524800 0.3822100 -0.0703040 -0.0710710 -0.0710710 -0.0385780 -0.0691580 -0.0833330 0.5422400 0.4510500 -0.0200010 -0.0200010 -0.0200010 0.0129340 0.0129340 0.0129340 -0.0402090 0.0000000 -0.0657160 -0.0058140 0.3603500 -0.0579240 -0.1013200 0.2452900 0.2452900 -0.0748110 -0.5539700 -0.0866510 0.7501300 0.6732600 0.5329200 -0.0712050 -0.0712050 -0.0712050 0.0146090 0.3822100 0.3822100 -0.0703040 -0.0710710 -0.0710710 -0.0710710 -0.0313590 -0.0691580 -0.0691580 -0.0833330 0.5422400 0.6030400 0.4492400 -0.7072900 -0.0200010 -0.0200010 0.5410100 0.0129340 0.0129340 -0.0603450 0.2061000 -0.0029091 -0.0029091 0.552 0.382 0.000 0.000 0.000 0.000 0.000 0.542 0.449 0.215 -0.708 0.000 0.000 0.471 0.471 0.000 0.000 1.433 1.433 0.000 0.000 0.206 0.000 0.000 0.000 0.360 0.360 0.000 0.000 0.245 0.245 0.000 0.000 0.657 0.657 1.669 1.669 0.000 0.000 0.216 0.216 0.552 0.382 0.000 0.000 0.000 0.000 0.000 0.542 0.449 0.215 -0.708 0.000 0.000 0.471 0.471 0.000 0.000 1.433 1.433 0.000 0.000 0.206 0.000 0.000 0.000 0.360 0.360 0.000 0.000 0.245 0.245 0.000 0.000 0.657 0.657 1.669 1.669 0.000 0.000 0.216 0.216 9.52159573 -0.05859316 4.79932048 11.15929484 11.56955484 7.57444140 11.03739341 8.55821673 8.91649725 1.74867590 12.74627482 11.72874594 1.94133171 2.84823734 2.74869737 7.95814551 4.29888555 10.41402800 11.09868411 10.73575300 9.29668820 9.12868933 7.53005201 9.86020038 6.90133878 7.48436938 1.74867590 -1.05859316 11.11000925 7.68280432 6.74223667 7.50739110 6.59238826 10.71712845 10.72064614 3.74869737 7.91861700 0.52626917 7.36340152 12.49927946 8.07319417 7.92717884 0.52626917 5.15079117 8.75991947 -0.05859316 4.40077016 0.52626917 6.17015541 3.98791201 3.40077016 10.52394963 NA 7.32504186 10.43619277 9.76550044 4.96370531 8.94133729 11.74203489 8.65386400 3.98572811 4.79932048 12.20680571 2.40075650 NA NA 4.29888555 12.033230 5.298889 8.638305 12.927624 9.916469 11.171057 13.234306 11.689740 9.122489 10.225583 13.648535 9.162924 8.777387 9.796984 NA 6.860201 11.433941 10.5220668 12.1608082 6.9911862 13.8477054 9.1963540 6.2900649 9.0602782 6.9186176 9.9739959 6.5111929 7.6486962 10.9139580 6.8720740 2.4007565 12.4456596 6.5337938 4.9022666 11.5718318 10.1701558 11.2914476 8.4843690 9.2151328 9.7623139 6.3422169 10.0216817 10.4291772 10.9511658 9.8070704 10.7078661 9.6426436 10.1993142 10.3065660 8.3054717 NA 9.0367341 8.0706201 11.8652217 7.0288001 11.2942082 7.3717897 9.9150346 10.2789591 7.1262130 14.0786085 10.3190900 10.5725142 12.4752752 10.2342339 1.2632748 0.5262692 10.5706937 10.3201739 9.3261209 TCGA-BH-A0DT 41 0 NA 2403 breast stage iia t1c n1a m0 female 2007 NA yes infiltrating ductal carcinoma 1 white NA 2 2 3 NA 2 2 4 4 4 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 6.935946e-08 11.1111111111111 33.3333333333333 11.1111111111111 11.1111111111111 33.3333333333333 11.0799371 9.7774774 11.9188502 9.4905836 8.2431411 9.2884841 10.0861134 9.6909684 10.1877362 12.6151359 11.1704006 10.4250945 3.4376272 13.1417163 4.5129158 10.0247352 9.1469573 8.5401656 10.0602023 12.7781929 5.5250917 14.5001073 6.5006380 9.6534862 10.6132661 4.6746640 0.2152437 9.6168256 9.2255299 1.9521844 8.6732999 8.1963267 -1.3695945 3.8781956 9.9993246 10.3137058 10.1601910 11.0732160 10.2175813 11.5768133 9.3281090 12.1314877 14.8382401 8.5691022 9.4843539 11.4518472 11.3341761 4.8001958 4.6963611 9.1557932 11.6712471 -1.3695945 11.2668971 5.4116330 6.1060070 5.0897058 10.5465252 11.8632929 10.6946784 12.9868620 13.0213818 8.3097528 11.4820215 11.1591880 11.3556388 11.2313468 4.4882515 11.7939222 11.4915533 0.9521844 10.3926545 9.2114732 3.0232731 5.6302715 11.3795134 10.3805607 10.1815002 10.0533885 3.3851549 9.9861741 13.4278834 12.7257519 10.1034709 10.0263421 0.93142000 0.93244000 -0.00512270 -0.00512270 -0.00981850 -0.00981850 -0.00912860 -0.00912860 0.41195000 0.41195000 0.40577000 0.38684000 0.38684000 -0.00277070 -0.00277070 -0.00277070 0.01530800 -0.00705760 -0.00788630 -0.00401620 0.00319100 0.01223700 0.01223700 0.01223700 0.01838300 0.01838300 0.01838300 0.01181800 0.00360760 0.00360760 -0.00091946 -0.00512270 -0.00981850 -0.01106000 -0.00981850 -0.00981850 -0.00912860 -0.00912860 -0.00912860 0.40911000 0.40711000 0.41195000 0.00138680 0.00138680 0.00138680 0.00138680 0.38684000 0.38684000 -0.00277070 -0.00277070 -0.00277070 -0.00277070 -0.00378630 -0.00332150 -0.00332150 -0.00788630 -0.00401620 0.00097064 0.00624810 -0.56992000 0.01223700 0.01223700 0.41396000 0.01838300 0.01838300 0.00104990 -0.00831840 -0.09723200 -0.09723200 0.387 0.387 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.427 -0.570 0.000 0.000 0.414 0.414 0.000 0.000 0.000 0.928 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.409 0.409 0.412 0.412 0.000 0.000 0.000 0.000 0.387 0.387 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.427 -0.570 0.000 0.000 0.414 0.414 0.000 0.000 0.000 0.928 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.409 0.409 0.412 0.412 0.000 0.000 0.000 0.000 7.958948 NA 5.358192 10.846715 11.489419 7.387762 10.956983 9.142203 8.601586 2.437627 11.718067 10.859779 5.584469 1.437654 4.437627 8.381817 3.215228 10.914807 11.448255 10.976786 9.261449 5.200128 7.624626 10.903777 7.218987 6.578640 1.215244 -1.369595 10.956702 5.996594 6.663696 7.871064 7.138067 10.132030 10.951637 4.607555 8.385160 1.952184 8.878200 13.118552 8.095839 7.378466 NA 1.215244 8.747916 2.537172 4.738795 NA 5.943155 5.305241 4.056540 10.268256 NA 9.551370 10.526983 9.833621 5.316772 9.363288 12.579734 8.222730 3.437627 3.987821 12.796043 2.089702 NA -1.369595 1.437654 12.788942 5.073216 8.970123 13.141716 10.381817 10.887955 12.778193 12.346770 9.259128 10.867482 13.469427 11.572420 9.155793 8.759556 -1.369595 7.488254 11.641325 11.266217 11.806601 6.873447 13.631414 9.254154 6.834844 9.414089 8.188693 10.655644 6.431172 8.118113 11.170401 5.849441 4.934054 11.231347 8.071142 5.815645 12.336553 10.409992 10.656104 8.577179 7.949945 12.088166 6.089704 10.205268 10.160191 10.484751 9.984522 11.128623 10.092263 10.603970 10.729620 9.275931 NA 9.411780 7.717735 11.671247 6.911043 11.266897 7.005312 10.899814 10.546525 7.005312 14.241441 10.011815 10.413271 13.276719 10.897937 4.244986 NA 10.333311 10.303582 9.840944 TCGA-BH-A0DV 54 0 NA 2064 breast stage iiia t2 n2a m0 female 2007 NA yes infiltrating ductal carcinoma 9 white NA NA NA 3 3 4 3 3 4 4 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 3.467973e-08 0 25 0 75 0 9.5857047 9.7582349 11.7801297 9.4106720 8.4075146 8.7088121 9.7973611 9.7246298 11.0579810 12.9835989 10.9187648 10.5815080 2.3388808 12.8232433 2.9518675 10.3302494 7.4584460 8.2598600 9.3148266 12.1376996 -0.1635911 12.9734384 6.0716104 9.8012161 9.6602919 6.3755521 NA 9.7759732 8.3026403 4.2514313 8.7944633 7.8844264 -0.7485536 6.5040976 9.6232081 10.0953524 9.7062448 10.4952005 9.9096429 11.1101895 11.0730061 9.3768449 15.5503353 7.9639584 10.0216824 11.3914623 10.8943856 6.3858572 5.2401158 9.2978735 11.3941767 NA 11.3911427 6.7067585 5.3909840 4.8807884 10.3077304 11.4746790 10.6894435 11.9887844 12.5110276 9.0154736 11.0855074 10.6846308 10.9381508 11.2313924 4.9238575 11.4461883 10.6727073 -1.7485536 10.5132325 8.6416002 2.4205632 5.3388950 10.6729703 9.8734832 9.9987853 9.1109661 5.2401158 9.7026425 13.8418138 13.3829669 10.0079878 9.7749934 0.17752000 0.48811000 0.00714880 0.01829800 -0.00201250 0.01523400 -0.00034991 -0.00034991 -0.00699190 -0.00699190 -0.00699190 -0.00048851 -0.00048851 -0.00131990 -0.00131990 -0.00131990 -0.00048851 -0.00048851 -0.00118140 0.06160300 -0.00561000 -0.00076568 -0.00076568 -0.00076568 -0.00367370 -0.00864890 -0.00864890 -0.01375000 0.17752000 0.17752000 0.00173030 0.00714880 -0.00201250 0.00000000 0.01523400 0.01523400 -0.00034991 -0.00034991 -0.00034991 0.00993320 0.00993320 -0.00699190 0.00854050 0.00854050 0.00854050 0.00854050 -0.00048851 -0.00048851 -0.00131990 -0.00131990 -0.00131990 -0.00131990 -0.00048851 -0.00048851 -0.00048851 -0.00118140 0.02547800 0.00728790 -0.00561000 -0.22424000 -0.00076568 -0.00076568 0.00979390 -0.00367370 -0.00864890 0.00756620 -0.00782060 -0.00090425 -0.00888090 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.065 -0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.178 0.178 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.065 -0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.178 0.178 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6012657 4.5368362 6.8438884 10.3134776 11.1836462 6.1158032 11.3272448 10.8767682 8.7190369 5.7026437 11.6886633 11.6239728 2.9518675 3.4993612 2.7749873 8.1340746 3.7749978 10.9229725 11.4418735 10.6321630 8.9945828 3.2056271 6.8988904 10.1880694 7.0229204 8.9265062 -0.7485536 NA 11.6062318 7.6565729 8.6850168 8.0474708 7.1732724 10.0138094 10.3719933 5.1702936 8.0212693 NA 8.6703383 13.0720093 6.6692834 9.2958256 -0.1635911 1.9518861 8.0474708 NA 6.7432847 1.4213714 5.0843194 4.6311567 2.4993484 10.4030822 NA 10.3355755 10.0531399 9.7837873 6.4850516 10.0109036 11.6322983 8.9344260 1.7108781 3.8363988 10.9596532 2.1583370 NA -1.7485536 1.7108781 12.135220 2.951868 7.953604 12.823243 10.119482 10.782325 12.137700 11.244724 9.093782 10.554356 14.093610 11.532637 9.297873 10.109801 NA 6.794463 11.232107 11.425109 11.898215 6.301280 14.055839 9.069215 5.508818 8.602371 7.566581 10.088346 6.140175 7.858762 10.918765 6.843888 3.338895 10.514701 4.359957 5.854390 11.936290 10.497578 10.614471 8.440020 8.284855 11.833456 5.591281 10.091308 9.706245 10.258108 9.764666 10.858762 10.663472 9.999205 10.799049 9.281409 NA 9.276848 8.460885 11.394177 6.115618 11.391143 8.696446 10.472602 10.307730 6.851344 14.163502 10.017546 10.857837 12.988256 10.166190 NA NA 9.785734 10.349134 9.079568 TCGA-BH-A0DX 62 0 NA 2156 breast stage i t1b n0 m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 3 NA NA NA 2 4 5 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-06 2.774378e-07 18.6440677966102 55.9322033898305 3.38983050847458 18.6440677966102 3.38983050847458 9.3651665 9.9711435 11.7130753 8.9271504 8.0936399 9.7699910 10.9865736 10.3078664 10.8204474 15.1030376 10.3610900 10.9825988 2.8219347 11.5871518 1.1589833 10.8714932 5.5397885 8.3925858 11.2368946 12.9189237 NA 13.6619223 3.2178666 9.3871434 10.8510004 10.4420545 2.9663197 11.5900789 10.4797667 2.9663197 8.0436453 7.2464290 NA 5.1887135 9.9321053 10.0936399 9.1495429 11.1769344 10.4347028 10.8760713 3.5281962 10.6939174 15.1080633 8.3630317 10.1542622 10.7644457 10.4532040 4.1589671 5.0817998 8.9960684 11.7486173 -1.4258500 10.9931738 6.5852315 6.5397885 6.9533817 10.3631297 11.7531353 10.3533127 12.5650826 12.7418138 7.4163542 11.0768355 9.9464225 10.9735486 11.2640016 4.1589671 11.4958446 9.6896977 0.1589833 10.4183171 8.8524530 3.1187418 5.7135556 10.4574106 10.0400801 10.0179833 9.2587523 2.4808855 9.9177446 12.5866282 12.0474558 9.4005522 9.6286079 1.78530000 0.29596000 0.02841700 0.03397200 0.00235810 0.00180300 -0.00843850 -0.00691950 -0.00097017 -0.00097017 -0.00097017 0.00000000 -0.00318590 -0.00318590 0.00124810 0.00124810 -0.00526100 0.19756000 0.01782400 -0.00124730 0.00180300 0.01056400 -0.35988000 -0.00152430 -0.00609040 0.00041593 0.00041593 0.02539000 0.00013863 -0.34377000 -0.01642900 0.02841700 -0.36397000 0.00235810 0.00180300 0.01782400 -0.00843850 -0.35099000 0.54824000 -0.00207840 -0.35282000 -0.00097017 0.00305220 0.00305220 -0.00354890 0.00132380 -0.00318590 -0.00318590 -0.00207840 0.00124810 -0.01285100 -0.01285100 -0.00526100 -0.35931000 -0.35931000 0.01782400 -0.00124730 -0.00124730 -0.35110000 -0.01703200 -0.36386000 -0.35988000 0.01167900 -0.00609040 0.00041593 0.02539000 0.00013863 0.01572700 0.00182950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.351 0.351 0.351 -0.362 0.000 -0.372 0.000 0.000 0.000 0.327 0.327 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.364 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.020 -0.201 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.351 0.351 0.351 -0.362 0.000 -0.372 0.000 0.000 0.000 0.327 0.327 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.364 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.020 -0.201 8.4288722 8.9727475 6.4808936 10.1645907 11.6896976 6.6865467 11.4644580 9.7823294 9.0653257 3.2744406 11.9345765 11.9861633 1.8959230 4.2178588 3.4808984 7.4627468 3.7834567 10.6818746 11.7986084 10.5704772 9.2348909 5.0002705 7.7186616 10.4159611 6.7439283 8.1131624 0.5739561 NA 11.7200950 6.9315554 8.9641728 8.2322151 8.6414380 10.4430885 10.3167342 4.1285904 8.4100540 -1.4258500 8.1343365 13.1467039 7.9315554 8.1014804 1.1589833 3.2178666 7.4505209 0.8959230 5.3288903 NA 4.8959327 4.7237497 2.1589509 10.6029457 NA 8.2692319 10.5987970 9.3446676 5.7135556 10.2241579 12.1722889 10.4312072 3.3288939 4.5963687 10.6524881 2.8959230 NA -0.4260439 2.0334406 12.774672 6.450520 8.513583 11.587152 10.033435 11.293606 12.918924 12.421550 9.302775 10.323756 14.179773 10.478262 8.996068 8.943601 1.574005 7.105385 11.435284 11.5280182 12.5465348 6.0578185 14.1132195 8.6654390 5.9403265 8.1073332 7.5541429 10.8742046 5.7237497 9.4234088 10.3610900 6.8171781 1.5740046 10.7554666 4.3553617 7.3267854 10.7910526 10.7871079 10.5143173 8.5683571 9.0887178 10.9465967 5.6400916 11.4889120 9.1495429 10.3817611 9.8088212 11.8846165 10.3301430 10.2473128 10.6703894 8.9770157 0.8959230 9.6676853 7.1997126 11.7486173 5.0497353 10.9931738 8.6441245 10.8728911 10.3631297 6.6346993 13.0808691 10.9026786 10.9767493 12.4874541 10.7928696 3.2178666 -0.4260439 10.4280929 10.5633982 9.6060494 TCGA-BH-A0DZ 43 0 NA 495 breast stage iib t2 n1a m0 female 2009 NA no infiltrating ductal carcinoma 1 white NA 3 2 3 NA NA NA 2 2 5 2 NA NA 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.860874e-06 2.774378e-06 9.05511811023622 81.8897637795276 1.18110236220472 5.90551181102362 1.96850393700787 9.4122648 9.5310510 10.8056073 8.5781968 7.0921303 8.9311382 8.2247373 9.6681037 11.0837047 13.3541373 10.7190407 10.4309841 NA 15.3336173 1.7612002 9.6830541 4.2206473 8.3869221 8.8001321 12.3912527 NA 12.8785316 1.7612002 9.1620927 10.3518002 8.7124978 0.7612002 12.4793179 10.1535306 -0.2387147 7.9210846 7.0186008 1.3461910 4.9311393 9.4976152 10.5194363 9.3138823 11.8998049 9.5293976 10.2010440 7.9559701 10.1758984 15.1368975 7.0602377 8.7835811 10.1780107 9.9298852 4.2206473 3.2206395 8.7269974 10.9058714 NA 11.2610590 4.9706650 5.8273033 5.1535297 10.4967692 11.7636766 9.8406980 12.2945429 12.5446207 7.9900319 11.2570682 10.2690078 11.5110826 10.9510377 4.9706650 11.4997277 11.2615571 2.0831453 10.1132565 9.1121522 0.7612002 5.0466133 10.5119201 9.6145227 8.7891192 10.3186768 NA 9.8232593 12.7447412 11.5633256 9.2144838 9.2103618 0.02152900 0.00374650 0.01335300 -0.00221680 -0.05738500 0.00416320 -0.00304750 1.77320000 -0.00138580 -0.00138580 0.63573000 0.00527490 0.00527490 3.65690000 2.92530000 -0.64076000 0.03312700 0.00000000 -0.00885260 0.02553100 0.01698500 -0.00124730 3.65690000 1.95970000 0.00000000 0.00000000 0.00000000 0.02076300 -0.02630400 -0.64048000 -0.00857660 -0.64528000 0.00069327 0.31434000 0.00416320 0.00416320 -0.00304750 -0.00304750 0.03891300 -0.37302000 -0.37696000 -0.00138580 0.00513590 0.00513590 0.00513590 0.00513590 0.00527490 0.00527490 -0.64728000 0.00027728 -0.64076000 -0.63632000 -0.64471000 0.00000000 0.00000000 -0.00885260 0.02553100 0.02553100 0.01880300 -0.64781000 -0.63547000 -0.62751000 -0.00401620 0.00000000 0.00000000 0.02076300 -0.00249380 0.02876300 0.02876300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.402 -0.586 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.375 0.000 0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.402 -0.586 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.375 0.000 0.593 0.000 0.000 0.000 0.000 8.5227643 2.5685672 5.3759222 10.2877124 12.7390297 5.0521550 10.4167439 7.4818333 8.7612131 -0.2387147 12.0460373 11.2041566 NA NA 0.7612002 7.5491154 5.0091411 11.9737095 11.2690078 9.7327568 9.1578178 5.1874788 7.5685680 9.0373375 6.9210840 4.5161034 5.7384922 NA 10.2984315 4.2206473 8.0138787 7.1449172 5.6919501 9.4316393 9.0020046 5.3759222 7.6377298 NA 6.9706662 12.6643418 5.0466133 7.8697376 NA NA 7.3461760 NA 3.7612108 NA 4.8056072 NA 3.3461768 11.0672748 0.7612002 7.2847751 10.1642251 10.0268281 3.8486780 9.3196340 13.5823892 8.9535059 5.1874788 5.1187667 10.5877617 4.0831453 2.0831453 0.7612002 1.7612002 12.9662931 5.9311370 8.0921303 15.3336173 10.0808852 10.3395858 12.3912527 10.8326755 8.1874778 10.5384684 13.4264380 10.3914802 8.7269974 8.7470550 -0.2387147 8.5621130 11.0971617 11.200005 12.222948 3.461646 13.556137 9.696378 5.890495 8.688991 7.412265 10.198653 5.910960 6.880154 10.719041 6.064995 3.761211 9.640796 5.910960 6.225718 11.659437 9.794636 10.476317 6.859245 9.490834 10.233904 5.405070 11.365266 9.313882 10.542573 9.545848 10.568568 9.181173 11.237959 10.252064 8.738493 NA 8.224247 6.816496 10.905871 5.869738 11.261059 8.311960 10.554003 10.496769 7.755567 13.700976 10.830663 10.125348 11.822922 10.388747 1.346191 NA 10.107727 9.368543 8.157818 TCGA-BH-A0E0 38 0 NA 134 breast stage iiic t3 n3a m0 female 2009 NA yes infiltrating ductal carcinoma 10 white NA 3 3 4 4 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.935946e-07 1.733986e-07 42.3076923076923 11.5384615384615 11.5384615384615 3.84615384615385 30.7692307692308 9.8964496 8.7852707 11.7011665 8.5333523 8.3568872 7.4899956 11.1155438 9.6174612 9.5416335 13.4236166 10.6039676 10.1588689 4.8400150 12.0647337 2.2854318 7.3133311 6.6604638 8.2337922 7.4147081 7.7032772 1.6073422 12.4319934 8.9543097 10.0910478 10.0082322 6.1680683 0.8704239 8.7116897 11.6924269 3.9858647 9.2755288 6.6073525 10.0302585 4.0403138 9.7356049 10.7397241 9.6208151 8.8070251 9.1056037 11.2013041 3.7448607 9.1877999 14.0599030 7.4251806 8.7428056 10.7586231 9.9516487 2.6073422 2.0927825 8.9184199 9.0943889 NA 11.2334269 2.6073422 5.5522111 4.6777394 8.0201343 11.7540488 10.0585640 10.3008399 12.2612727 5.5333515 11.7463925 10.1680678 9.9953702 10.9498721 3.9858647 11.3434165 7.2220626 NA 10.9265734 9.0031013 4.8853352 3.4553469 11.5363153 10.8438455 9.9578500 8.9789118 1.6073422 7.9789118 11.6208151 12.0550560 10.2468744 10.0903624 2.2422000 0.0000000 -0.4160800 0.0140510 -0.4230900 -0.4512500 0.0160060 0.0160060 0.0015255 0.0015255 0.4222100 0.3450200 0.0308730 0.0102850 0.0102850 1.5477000 0.4233500 -0.4191500 0.4059400 -0.4216600 -0.4476000 -0.3978600 -0.3978600 -0.3978600 -0.3785300 -0.0167040 0.4247100 0.4314200 0.0683780 0.0133530 -0.4233500 -0.4182100 -0.4438300 -0.4230900 -0.4360900 -0.4249500 0.0160060 0.0160060 0.0155870 0.4334400 0.4312500 0.0015255 0.4071100 0.0083351 0.0083351 -0.4061700 0.0308730 0.4278500 0.0607940 0.0102850 -0.4348500 -0.4348500 0.4233500 -0.4149800 -0.4149800 -0.4257100 -0.4216600 -0.4216600 -0.4186000 -0.3882800 -0.3978600 -0.3978600 0.4132900 -0.3785300 0.4534300 0.4007700 -0.0008316 -0.4078200 -0.4078200 0.000 0.000 0.000 0.000 0.002 -0.415 -0.426 -0.422 -0.419 -0.406 -0.406 -0.398 -0.398 0.413 0.413 -0.362 0.000 0.000 0.000 0.401 0.401 0.000 -0.408 -0.020 -0.430 -0.415 0.000 -0.423 -0.423 -0.436 -0.436 0.000 0.000 0.423 0.423 0.000 0.000 0.000 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 0.002 -0.415 -0.426 -0.422 -0.419 -0.406 -0.406 -0.398 -0.398 0.413 0.413 -0.362 0.000 0.000 0.000 0.401 0.401 0.000 -0.408 -0.020 -0.430 -0.415 0.000 -0.423 -0.423 -0.436 -0.436 0.000 0.000 0.423 0.423 0.000 0.000 0.000 -0.406 0.000 0.000 8.4300828 NA 5.1680683 11.7922282 11.7730136 7.1701444 12.3875645 9.2034682 8.8924035 -0.7145386 10.1008080 11.8324422 3.2854318 -0.7145386 4.0403138 9.7961889 3.0927825 8.3160919 11.7842740 11.7626771 9.7991524 0.2854614 9.4899958 10.3702332 6.2279393 2.0927825 8.1802424 4.1923125 9.5297885 2.6073422 7.6777422 8.8129018 6.7611576 10.2570617 11.3064047 0.8704239 9.8313546 6.4752487 7.6208151 13.2060568 8.1151477 7.6252749 NA 7.6118540 7.4452963 4.2854244 3.8089822 1.2854022 4.7772777 -0.6859416 3.2854318 11.2124619 1.8703844 7.2910491 10.6479165 9.9129586 4.3298197 11.2519302 10.5679340 7.9858647 2.0927825 4.1434097 10.9520926 2.4553601 NA 7.7530302 4.6073540 9.9424752 10.1087921 8.0798405 12.0647337 10.4377096 11.4319934 7.7032772 8.1680678 10.4598262 11.0315191 13.7386311 10.5748674 8.9184199 7.9684191 -0.7145386 7.0268919 11.5277057 10.4408755 11.5039880 5.7611576 13.7909864 8.6841686 8.5823411 10.0593881 8.3050156 9.4677323 4.6777394 6.3728877 10.6039676 9.7448564 1.6073422 11.1250223 6.8628530 7.6380861 10.9400608 10.1332652 10.0967995 8.5983079 10.2352515 7.6648028 6.2279393 10.8942756 9.6208151 9.7428056 10.4783340 11.0382235 10.8207002 10.4230563 10.7484382 8.2102374 NA 8.8452990 4.0403138 9.0943889 7.4503320 11.2334269 4.0403138 10.3494939 8.0201343 8.1434057 15.0388505 10.6648032 11.6712872 11.4789501 10.7299221 3.7448607 -0.7145386 10.6948157 10.0082322 9.3174705 TCGA-BH-A0E1 52 0 NA 477 breast stage iib t2 n1 m0 female 2009 NA no infiltrating ductal carcinoma 2 white NA 1 1 3 5 5 3 4 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 3.467973e-07 26.6666666666667 36.6666666666667 3.33333333333333 16.6666666666667 16.6666666666667 10.436453 9.459354 11.676113 9.397177 8.611681 8.913612 10.308972 9.645594 9.826964 12.772736 11.155167 10.460570 1.663299 12.242158 3.186881 9.635576 7.579193 7.978463 10.688453 13.138921 3.570208 13.584318 6.533679 10.174928 10.410668 6.685682 -1.336792 7.483493 11.163409 NA 7.473885 6.892132 -1.336792 4.617510 9.407307 10.713843 12.030046 10.942344 9.631981 10.769550 8.562671 10.598479 14.566231 8.107894 9.426526 11.517987 11.340593 3.055630 6.558131 8.730748 11.338609 1.663299 11.382703 5.418200 6.971653 4.663316 10.358977 11.854836 10.453662 13.033388 12.765618 9.192744 10.873072 10.489823 11.165648 10.935652 4.155166 11.315487 11.011212 2.122739 10.204894 9.031820 1.248292 4.248277 10.691220 10.816549 9.998704 9.010935 1.833254 7.325092 11.885505 11.920112 9.692601 9.166146 1.36200000 1.36970000 0.00033319 -0.01527600 -0.01749700 -0.00816070 -0.00193820 -0.01993900 0.30194000 0.30194000 0.30378000 0.00472500 0.01349900 0.00339820 0.00501200 0.00501200 -0.02315300 -0.02315300 -0.01009300 0.00277620 0.02174500 0.02020400 0.00522100 0.00522100 0.00319270 0.00319270 -0.00094506 0.07527300 0.02020400 -0.00902060 -0.00967890 0.00778000 0.01726600 -0.01749700 -0.00816070 -0.00816070 -0.00193820 -0.01993900 -0.01993900 -0.01262500 -0.00829880 0.30194000 0.00332620 0.00332620 0.00332620 0.03101500 0.01349900 0.01349900 0.00339820 0.00501200 0.00000000 0.02146500 -0.02315300 0.00541560 0.00541560 -0.01009300 0.00277620 0.00277620 0.02174500 -0.74942000 0.02020400 0.00522100 0.01517000 0.00319270 -0.00094506 -0.75322000 0.01112300 0.02581300 0.02581300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.749 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.342 -0.753 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.302 0.302 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.749 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.342 -0.753 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.302 0.302 0.000 0.000 0.000 0.000 8.5970044 NA 7.4962043 10.9162749 11.5499631 7.1031451 11.4842906 9.2348486 8.8605305 NA 11.8362101 11.8769634 3.4182034 -0.3366098 1.4706670 8.5056643 3.0556295 10.1181273 11.4259035 11.4544768 9.2835336 1.8332544 7.7401295 10.5962667 6.6175101 3.7077125 1.9852454 NA 10.9933904 4.8332393 6.5275005 8.0811665 6.4182018 9.5243000 10.7666017 1.9852454 8.7783574 NA 7.8993279 12.9328789 6.4577305 8.4930364 NA -1.3367920 8.3286498 -0.3366098 5.5702049 NA 2.8332342 4.9127600 1.9852454 10.5743313 -1.3367920 8.0318203 10.5228487 9.9259960 4.9852408 9.4030945 12.1199250 7.5762031 1.8332544 2.5701957 13.1995004 1.2482919 0.2482919 4.4446737 1.2482919 14.525472 6.240742 8.298125 12.242158 10.294946 11.770040 13.138921 12.884901 9.236014 10.437277 13.660670 10.790986 8.730748 10.090103 -1.336792 7.530593 11.816391 10.7751016 12.3680821 5.2780219 13.8350356 8.8369911 3.3637598 8.8319858 9.4735160 9.9210318 4.0895744 8.4495837 11.1551670 4.6405920 8.2293678 10.4446736 8.6348575 7.0607316 10.2972172 9.6745412 11.4882726 8.5025176 8.7809570 12.8807415 2.5701957 9.0718879 12.0300459 10.1995611 10.0785275 11.6251253 9.8450873 10.1666428 10.7233342 9.2862807 NA 9.2419507 9.1530917 11.3386094 4.2179054 11.3827027 6.8382396 10.3767004 10.3589772 7.0296362 14.2055598 10.6091234 10.1380338 12.7185115 10.0668585 -0.3366098 0.2482919 10.0668585 10.3971766 9.3498144 TCGA-BH-A0E2 49 0 NA 435 breast stage iiia t2 n2a m0 female 2009 NA no infiltrating ductal carcinoma 4 black or african american NA 1 1 1 2 5 2 1 4 3 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 2.080784e-07 25 17.8571428571429 3.57142857142857 25 28.5714285714286 9.2365361 9.7234372 10.4184053 8.2763436 8.8416939 8.4579898 10.9168356 10.4364959 10.5332777 13.9830210 11.1586771 10.7331164 5.9174222 11.7526104 4.0769011 8.8600882 5.9904852 8.1039051 10.5709876 12.7840981 -0.3494192 14.7398783 2.2356045 9.2223873 11.8105060 7.8527586 2.4579882 8.2836301 10.9632341 0.6506727 7.9949304 7.8746365 3.2356045 4.0081910 9.1781118 10.5575254 9.4179915 10.7190771 9.9910412 11.0021261 10.4426115 11.5968099 15.1000413 8.0894060 11.8021254 10.8500004 10.3239438 3.4055159 5.9267585 8.8330292 10.5450735 0.2356045 11.4179916 5.0769011 5.1100667 3.8985663 11.0873463 11.9819716 10.2355972 11.9053681 12.1721125 8.1039051 11.4801593 10.7117359 10.5454525 10.2337175 4.8003822 12.4145732 11.0972011 NA 10.4150917 9.0289296 3.1015156 4.6048304 11.1230717 11.7376002 10.5252319 9.9663504 4.5575265 9.5279189 12.3592876 11.0876064 10.1761556 9.1008150 0.05779600 0.05616000 0.68105000 -0.03626500 -0.01009400 0.03637000 -0.13264000 -0.26733000 3.19310000 0.03157700 0.93976000 0.00569190 -0.01752900 0.01890900 0.09434600 -0.76415000 0.03510000 2.82160000 1.38250000 -0.00622860 0.00805670 -0.72217000 -0.70666000 0.27647000 0.00249690 0.00249690 -0.18484000 0.11858000 -0.64668000 -0.69857000 -0.63736000 -0.00304750 0.01726400 0.00013863 -0.02596600 -0.02596600 -0.13264000 -0.29721000 0.19999000 0.01349200 -0.13214000 -0.73845000 -0.11116000 -0.02304800 -0.02304800 0.09115500 0.00124810 0.01768400 0.01890900 -0.62522000 -0.80136000 -0.77107000 0.03510000 -0.51794000 -0.47056000 0.66549000 -0.69079000 0.04584900 0.00805670 -0.63197000 -0.74471000 -0.70666000 0.06422500 0.00249690 0.00249690 0.11228000 -0.12082000 0.14786000 0.14786000 0.000 0.000 0.000 -0.722 0.000 0.000 0.665 0.000 0.000 -0.539 -0.671 -0.722 -0.722 0.000 0.000 0.000 0.000 -0.647 -0.647 0.112 0.112 0.000 0.148 -0.685 -0.685 0.000 0.000 0.000 0.000 0.000 0.000 -0.297 -0.297 0.000 0.000 0.214 0.940 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.722 0.000 0.000 0.665 0.000 0.000 -0.539 -0.671 -0.722 -0.722 0.000 0.000 0.000 0.000 -0.647 -0.647 0.112 0.112 0.000 0.148 -0.685 -0.685 0.000 0.000 0.000 0.000 0.000 0.000 -0.297 -0.297 0.000 0.000 0.214 0.940 0.000 0.000 0.000 0.000 8.3648801 NA 5.6950278 10.8646502 11.6994621 7.1859101 10.5616522 9.3603562 9.2090554 3.4055159 12.1519743 10.9699992 3.1100625 3.5086188 2.3510629 7.6336281 3.7799215 10.7317853 11.5590273 10.6084623 9.6562593 -1.3492354 8.0831767 10.5093928 5.7695761 9.5650198 4.2944884 NA 9.8716176 6.0081866 7.5665138 7.5665138 6.1424870 10.4350569 10.2242819 2.7380977 8.3751485 0.6506727 7.6646549 11.9250129 7.4579898 9.0343390 -1.3492354 5.1897929 7.4898383 -0.3494192 5.7380977 0.6506727 5.9725617 4.2367987 2.8205670 12.1885811 0.2356045 7.7927415 10.5469672 9.6156975 5.2653431 8.8818558 12.3252684 7.1897939 1.6506267 3.3510770 11.7262810 2.8985566 -1.3492354 1.4580145 1.6506267 13.9940287 6.2872599 8.7669787 11.7526104 10.9931428 10.2836299 12.7840981 13.2465332 8.3141930 10.8045033 13.0553106 11.2440258 8.8330292 8.5408991 0.2356045 7.8429273 11.4474855 11.2045040 12.3459718 5.3785567 12.6821636 8.6702253 6.1182393 8.8205597 7.8379867 10.8318087 6.3230602 8.4787712 11.1586771 8.6590633 4.1741987 10.7721682 6.9032998 6.8891827 11.2308933 10.2607368 11.3710928 8.1162010 9.4771833 10.4250100 5.3921010 10.6427233 9.4179915 10.8509203 9.5332777 11.6439270 9.6492251 11.1036481 10.4965168 9.0048842 1.2356045 8.7063510 7.0580729 10.5450735 5.6950278 11.4179916 7.3052711 10.6672306 11.0873463 6.5148213 13.4575870 10.0010215 9.9793097 11.9628086 10.5920492 0.9725456 0.2356045 10.6660498 9.6963943 9.1131371 TCGA-BH-A0E6 69 0 NA 293 breast stage ia t1c n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white NA 3 3 4 NA 4 3 5 5 2 7 NA NA 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.109751e-06 2.774378e-07 31.7073170731707 4.8780487804878 14.6341463414634 36.5853658536585 12.1951219512195 8.69029172 7.56060033 10.31284054 6.83312665 8.62348831 7.82720168 8.42790991 10.00960625 11.06792436 12.38166423 9.63200987 9.98719763 2.48735772 12.42925519 2.36182449 9.97987258 7.70005055 8.42986615 10.09283126 7.71617057 -1.09757906 11.57282417 8.18083858 10.46892375 10.00305151 4.90238717 1.22428729 8.97920481 12.16272071 4.03166868 7.70974416 7.55702556 7.80325610 6.14079297 6.73527981 9.34947232 9.60629287 8.32655532 8.34533250 10.39974212 4.15031596 7.72893747 14.50867874 6.94300822 9.00567704 10.63879111 9.99514628 4.60283097 6.18779150 8.97251001 9.69842877 0.90242094 11.19298409 4.25994283 5.20617043 4.32865698 7.95495702 12.12850030 10.55388940 10.43084328 12.26611331 9.15268768 11.77429443 10.09406541 10.11488558 10.14139102 2.90238235 11.65142057 8.71296095 -0.09757906 10.02780263 8.99250164 3.29470896 4.22431816 8.97116760 9.97385160 10.04257991 8.65894550 5.32865339 7.08229809 11.04545348 12.60996404 10.58976489 9.89461953 0.7275400 0.6751100 0.6046700 0.6719600 -0.3109600 -0.6672600 0.0723960 0.1395400 1.5749000 1.5749000 0.0119580 0.7985900 0.3055300 0.0134920 -0.3121300 0.0137790 -0.3372200 -0.0030475 0.0253900 -0.3114300 0.0024969 -0.1256400 -0.1256400 -0.1256400 0.0068044 -0.0168040 0.3310800 -0.0646430 -0.2950800 0.2367400 -0.1031600 0.0000000 -0.3207700 -0.3212400 -0.3269300 -0.3269300 0.0506770 0.1395400 0.1350500 -0.3211200 0.8695100 -0.3298200 -0.3053700 -0.3053700 -0.3053700 -0.3053700 0.3055300 0.3206000 0.0134920 -0.3121300 0.0161840 0.0161840 -0.3235600 -0.0095426 -0.0095426 -0.6264600 -0.3114300 -0.3226300 -0.3106100 -0.3147100 -0.1256400 -0.1256400 0.2648300 -0.3136500 -0.0263040 0.2878600 0.1092100 -0.2998100 -0.3101400 0.799 0.306 0.000 0.000 -0.321 0.000 0.000 -0.311 -0.307 0.094 -0.315 -0.126 -0.126 -0.242 0.022 0.000 0.000 0.237 0.237 0.288 0.000 0.109 -0.300 0.328 0.000 0.000 0.000 -0.313 -0.313 0.000 -0.327 0.000 0.000 0.474 0.795 -0.330 0.000 -0.305 -0.305 -0.152 0.305 0.799 0.306 0.000 0.000 -0.321 0.000 0.000 -0.311 -0.307 0.094 -0.315 -0.126 -0.126 -0.242 0.022 0.000 0.000 0.237 0.237 0.288 0.000 0.109 -0.300 0.328 0.000 0.000 0.000 -0.313 -0.313 0.000 -0.327 0.000 0.000 0.474 0.795 -0.330 0.000 -0.305 -0.305 -0.152 0.305 9.23889575 7.27742876 5.69680621 12.36897553 12.44964525 6.92198014 10.24668515 7.26306070 9.05694139 -1.09757906 11.43644885 11.25388063 3.07231164 -0.09757906 3.98985654 8.92752880 2.60283691 9.91919749 11.53629263 10.52215062 9.18547758 1.22428729 9.69192284 11.05689088 7.40621521 7.63709867 1.70973176 -1.09757906 9.81901508 5.01091408 7.24223950 8.38821839 8.72734803 11.32939817 10.73804487 0.90242094 9.21867075 -1.09757906 6.96847788 12.38481903 7.85075630 8.64554063 NA 1.48733199 8.83607971 6.47224405 3.07231164 NA 5.18779150 3.60282504 4.36181748 12.24668512 6.32024096 10.53083479 10.84270280 10.97284563 5.78503260 9.47603632 11.16917572 7.49857879 5.03167309 3.54624008 10.18547758 0.48738344 9.37913551 2.70975381 8.54804777 10.338580 8.917804 7.965784 12.429255 10.409688 12.089277 7.716171 10.813781 8.898156 9.477928 12.588014 10.617922 8.972510 9.188947 1.487332 7.378122 9.702480 10.6002255 11.7989108 4.9898520 14.2257188 9.0735659 6.0109141 8.9898520 8.2061699 9.4131039 6.7032890 6.6097491 9.6320099 11.7255574 8.4259510 10.0316723 9.1288014 8.2529308 11.0534057 9.2925582 9.8536738 7.8301672 10.1002203 6.7603700 8.1431806 9.6580947 9.6062929 10.0451345 10.3038021 11.2001652 10.6002255 10.6320100 10.2973877 7.1550550 NA 9.2951146 6.5677249 9.6984288 9.1562366 11.1929841 5.8449028 10.5783463 7.9549570 8.3760950 15.2821398 10.5412776 10.4555385 11.5888897 11.8649238 5.8331254 0.4873834 10.3972448 8.7049055 8.7588148 TCGA-BH-A0E7 79 0 NA 1363 breast stage iib t2 n1a m0 female 2006 NA yes infiltrating ductal carcinoma 1 white NA 1 1 3 NA 2 2 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 5 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 8.669932e-07 3.121176e-07 34.2857142857143 5.71428571428571 0 25.7142857142857 34.2857142857143 10.5151118 9.9518274 11.5902749 10.1257521 8.2013864 9.0514189 9.8910464 8.9593523 9.0388463 14.0500492 11.3359383 10.5051494 -0.7971122 12.8586622 3.2902622 9.3249771 4.8321508 8.4400062 9.9631003 13.1697971 2.2902474 13.7901341 7.0638825 9.5134941 11.3943180 5.3525431 -0.7971122 8.2348419 8.8064223 2.3727293 7.0036956 6.5908131 0.2027625 4.9709825 9.9597693 10.2255106 10.4140760 11.8237032 10.1782858 11.9376115 9.1475082 11.5774280 14.6429028 8.2189497 9.6647870 12.2481291 11.2869400 2.4507230 5.6540058 9.2471901 13.1111418 0.2027625 11.7239057 3.9576825 3.5603481 2.8466538 9.8119748 11.6361207 10.1394339 12.4949020 12.8613981 7.4601839 11.3625097 10.7795496 11.6728194 11.1823999 5.1335348 11.8483419 13.1674979 -0.7971122 10.2919155 9.4601839 3.2108875 4.3926197 10.1685804 10.4789205 10.6063407 11.7810508 3.1096949 8.8681321 13.5229620 11.7363692 8.1743395 9.6606900 -0.00462290 -0.00484610 -0.00041585 -0.01577400 -0.00912860 -0.00664320 -0.01807800 -0.01807800 -0.82089000 2.89970000 1.56330000 0.17400000 0.16130000 0.00000000 0.00000000 0.00000000 0.14741000 0.14741000 -0.00678130 0.00903120 0.00152550 0.02230400 0.02230400 0.02230400 0.02034300 0.02034300 0.02034300 0.01460900 0.03679400 -0.00462290 -0.00363830 -0.00698310 -0.00912860 0.00555290 -0.00664320 -0.00664320 -0.01807800 -0.01807800 -0.01807800 0.00458000 -0.00247710 -0.82089000 -0.00325120 0.01098200 0.01098200 0.01098200 0.16130000 0.16130000 0.00000000 0.00000000 0.00555290 0.00555290 0.14741000 0.14741000 0.14741000 -0.00678130 0.00903120 0.00903120 0.00680440 -0.82124000 0.02230400 0.02230400 0.00217240 0.02034300 0.02034300 0.01460900 0.00263570 0.00069327 0.00069327 0.161 0.161 0.000 0.000 0.147 0.147 0.000 0.000 0.000 0.708 -0.816 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.742 1.563 0.000 0.000 0.000 0.000 0.161 0.161 0.000 0.000 0.147 0.147 0.000 0.000 0.000 0.708 -0.816 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.742 1.563 0.000 0.000 0.000 0.000 8.1914807 NA 5.5337128 10.3686452 11.2239496 6.6335838 10.6418477 8.0186114 8.2942315 NA 11.4064499 10.7304050 3.7877563 4.7877563 4.0356855 8.3165381 2.5247157 10.4406035 11.7205885 10.1739804 8.8866678 0.5247658 7.7573847 10.3028012 5.4024698 2.0101353 NA NA 11.0211785 5.6290622 7.3876710 8.0747013 8.2889325 10.2927761 10.0627190 1.9032311 6.8787535 NA 8.1231488 12.2000638 8.6447028 7.8008488 NA 4.7419523 7.8857909 2.0101353 3.6946462 -1.7973629 1.0101353 6.5593358 0.7877668 10.8294177 1.3727293 4.6457420 10.3018151 9.7947858 3.9307184 9.0716187 11.8537356 6.6206480 1.0101353 1.9032311 12.0364768 4.7263571 -1.7973629 NA NA 13.268652 4.662228 8.975935 12.858662 10.138698 10.117181 13.169797 13.140170 9.165692 11.196088 12.220213 7.547092 9.247190 8.027755 -1.797363 7.334653 11.596991 11.0014703 11.9083204 7.1186753 13.8025331 8.9118800 2.2027938 9.8344279 8.2526446 10.3135502 5.3320777 7.0036956 11.3359383 5.2027977 -1.7973629 11.2052595 3.8466538 5.1909111 10.3343315 10.4207538 10.4765917 8.9849752 8.4730912 13.9855384 1.9032311 10.2637959 10.4140760 10.4292083 9.6678522 12.4040011 9.2133242 10.4982780 10.5996683 9.7248871 NA 9.7329926 6.8939458 13.1111418 2.5247157 11.7239057 7.2334634 10.2715744 9.8119748 7.3425263 13.3665990 10.1409054 10.3171891 12.7683742 10.0241714 NA 0.2027625 10.9232541 10.9200440 10.4459701 TCGA-BH-A0E9 53 0 NA 2489 breast stage iib t2 n1a m0 female 2006 NA yes infiltrating lobular carcinoma 3 white NA 2 2 2 NA 4 3 3 3 4 3 6 3 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 6.935946e-08 28.5714285714286 0 0 71.4285714285714 0 10.8079976 10.0190355 11.7237083 10.2104500 8.1160762 9.6377166 10.5258133 9.4943046 10.0380991 11.7370813 11.3603185 10.7071595 1.9608082 13.3171997 3.2562559 9.2974058 7.7373805 8.6862414 11.1970295 12.8779664 3.9932215 13.8905269 8.3992117 8.9355252 10.8885758 6.9107566 -0.4985863 9.2017451 9.4879194 3.4555574 7.7277782 7.8633097 1.3087104 5.0559548 10.9380777 9.9027791 9.8345215 11.0076737 10.3585697 12.0988368 5.4321042 11.2476705 14.7727562 7.9236205 9.3732715 11.3638098 11.4930652 5.9851816 5.1452209 9.6007139 12.7259708 -1.4985863 10.8556156 5.6098909 5.9607966 4.3840083 10.0702723 11.9083683 10.1202105 12.1692539 13.0905491 8.6948917 11.2566710 10.9055923 11.7941192 11.3468562 5.4202297 11.7672742 11.4095711 -1.4985863 10.1874289 9.2044046 3.7462483 6.2562540 10.5233871 9.7757443 10.0121303 9.7710772 5.0405243 10.7214421 14.3104309 12.9696720 10.0511509 9.6631279 0.777720 0.777720 0.165950 0.164850 -0.264020 -0.070001 -0.062092 -0.048478 0.000000 0.000000 0.000000 0.034254 0.034254 -0.057654 -0.057654 -0.057654 -0.058058 -0.058058 -0.271880 0.140580 -0.073076 -0.118090 -0.118090 -0.118090 0.147410 0.147410 0.147410 0.156660 -0.276910 -0.276910 0.151140 -0.286910 -0.264020 -0.258660 -0.070001 -0.070001 -0.062092 -0.048478 -0.048478 0.171360 0.167000 0.000000 -0.046718 -0.046718 0.030287 0.162950 0.034254 0.034254 -0.057654 -0.057654 -0.057654 -0.057654 -0.058058 -0.058058 -0.058058 -0.271880 0.140580 0.140580 -0.073076 -0.281560 -0.118090 -0.118090 0.134800 0.147410 0.147410 0.596920 0.179350 -0.055903 -0.055903 0.000 0.000 0.000 0.000 0.000 0.000 -0.272 0.141 0.000 0.155 -0.127 -0.118 -0.118 0.135 0.135 0.147 0.147 -0.277 0.501 0.597 0.157 -0.275 0.000 0.151 0.151 0.165 0.165 -0.264 -0.264 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.000 0.000 0.133 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.272 0.141 0.000 0.155 -0.127 -0.118 -0.118 0.135 0.135 0.147 0.147 -0.277 0.501 0.597 0.157 -0.275 0.000 0.151 0.151 0.165 0.165 -0.264 -0.264 0.000 0.000 0.000 0.000 0.171 0.171 0.000 0.000 0.000 0.133 0.000 0.000 8.00121226 -0.49858633 6.51259352 10.61282787 10.98442615 6.86221332 11.43321173 10.04727663 8.88356858 4.45556395 11.16314427 11.18777480 2.50136271 5.10128028 4.76815256 8.48435971 3.35935249 9.94171626 11.60383402 11.28456908 9.18260466 5.94431030 7.94638114 10.02982030 7.04439849 5.83228244 2.30871035 -1.49858633 11.14048075 7.77049277 7.30549726 8.23945819 8.53065330 10.57070512 11.00742574 5.24283493 8.27450535 -1.49858633 8.97304151 13.14465869 8.37018870 7.07122207 NA 6.80057380 8.03274775 NA 3.99322147 1.08630822 5.44388177 6.05902208 4.45556395 9.61250179 0.08637617 10.49571964 10.38209764 9.83284303 5.52373444 10.18567654 11.87014541 8.87531871 3.20180635 4.05595915 13.61070713 1.50136271 NA 1.96080823 1.96080823 13.336684 5.977099 8.017066 13.317200 9.939118 11.194200 12.877966 12.404212 8.970520 11.124790 13.557877 11.013613 9.600714 9.175559 NA 7.713255 12.660449 11.4667897 11.8591931 7.3437169 13.5242519 8.7361837 6.9811460 9.3476400 8.3087213 10.9641036 6.7349859 8.0674204 11.3603185 5.8412159 5.4786451 11.1295838 8.3421440 6.6093162 11.4703929 10.9561795 10.7628735 8.4526510 8.1049923 13.1637008 5.8412159 11.5355805 9.8345215 10.4482724 9.7575749 11.6417167 10.6361133 9.8567173 11.0674202 9.4120090 4.7681526 9.1022455 7.7629673 12.7259708 7.4202297 10.8556156 5.5993981 11.0566383 10.0702723 6.9976605 13.8941531 9.6007139 10.2994329 12.7125701 10.6495249 3.0863252 0.8232602 10.4261787 10.8583683 10.1808463 TCGA-BH-A0EA 72 1 991 NA breast stage iia t1c n1a m0 female 2008 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 2 2 2 NA 4 3 4 4 4 6 NA NA 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 26.3157894736842 21.0526315789474 0 21.0526315789474 31.5789473684211 9.91752320 9.74884695 11.91591619 9.55780581 8.32253210 8.79930688 10.34976864 9.12525847 10.92677358 12.24571960 10.85142846 10.32037388 3.46023144 13.35985123 3.89086495 10.12957887 7.88211356 8.63189804 10.48163407 12.67360001 1.52165383 15.07071486 6.98651788 9.70160762 10.35293934 7.11159580 -1.06340917 11.25775218 8.69155720 4.32898722 8.34181100 7.69822056 -0.06325843 4.02413348 9.96664705 9.91823699 10.11720049 10.71227988 9.93666959 11.47534358 2.10658283 10.13572852 15.03270528 8.67941711 10.65434603 11.53611761 11.29943540 5.24045172 7.37546175 9.02014907 11.47048602 NA 11.27206000 4.98106261 5.12649386 5.06595137 10.07366080 11.78196367 10.59175308 12.32468692 12.68318397 9.03601752 10.87293947 10.77674333 11.04650027 11.27707615 5.84355931 10.95138759 11.74100238 NA 11.04257813 8.98787848 3.94296484 4.66459092 11.02909649 9.73027295 10.41392194 9.21163014 6.02413348 9.55872147 13.48464860 12.57781825 10.44891633 10.06659660 1.0809000 1.1011000 0.0322230 0.0287050 -0.0315520 -0.0305960 -0.0769490 -0.0641610 0.0025785 0.0025785 0.0000000 0.1423000 0.1423000 -0.0084955 -0.0084955 -0.0044883 -0.0329870 -0.0310060 -0.0135960 -0.0167610 0.0494810 -0.0420320 -0.0420320 -0.0420320 -0.0374100 -0.0374100 -0.0374100 0.0232280 -0.0693870 -0.0693870 0.0106460 0.0322230 -0.0315520 -0.0315520 -0.0305960 -0.0300500 -0.0769490 -0.0641610 -0.0770310 0.1612400 0.1612400 0.0025785 0.1691900 0.1691900 0.1691900 0.1691900 0.1423000 0.1423000 -0.0163480 -0.0084955 -0.0044883 -0.0044883 -0.0329870 -0.0310060 -0.0310060 -0.0135960 -0.0167610 -0.0167610 0.0494810 -0.5519000 -0.0420320 -0.0420320 -0.0093235 -0.0374100 -0.0374100 0.0232280 0.0221060 -0.0397210 -0.0397210 0.142 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.671 -0.552 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.081 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.161 0.161 0.000 0.000 0.169 0.169 0.000 0.000 0.142 0.142 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.671 -0.552 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.081 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.161 0.161 0.000 0.000 0.169 0.169 0.000 0.000 8.4265176 0.5216538 7.8008559 10.8405515 11.4962857 7.1950473 11.5197524 10.3216531 8.8938442 3.1845977 11.5924240 10.9737670 2.6371001 7.3961012 3.5216287 8.4835643 3.5805314 10.2393085 11.2506863 10.9288999 9.5008192 2.2586094 7.7727197 10.6427339 6.3629345 9.2842911 NA NA 10.7208955 7.6161496 7.3246873 8.0633740 6.5216318 10.8631398 10.8473123 3.9366662 8.0161542 1.9366662 8.6440289 13.1642856 8.6882136 8.5272569 -1.0634092 3.4602314 8.6628877 2.1065828 4.4912567 NA 4.2585943 6.1084973 2.2586094 9.9700927 3.0241246 9.6414378 10.2495526 9.7147468 5.8314871 9.5823281 11.2594428 8.4404955 2.3961047 3.8908649 12.3499009 0.5216538 NA 2.5216287 2.3961047 12.41543926 3.32898004 8.55137951 13.35985123 10.18992621 10.97387341 12.67360001 12.00107560 8.98515657 10.61086189 13.53693103 10.99770325 9.02014907 8.44049547 -0.06325843 7.44446416 11.06916939 11.395845 11.951213 7.316048 14.572812 8.845062 5.879184 8.836027 7.081328 10.768943 5.744024 6.737569 10.851428 7.150989 2.106583 11.612406 9.097801 4.873306 12.594546 10.425514 10.391997 8.406311 8.311709 11.566709 5.819313 11.052022 10.117200 10.231865 9.753653 11.407329 10.628849 9.780591 10.808575 9.067240 5.106595 9.356988 7.594238 11.470486 6.346060 11.272060 7.050411 10.983453 10.073661 6.936670 14.232439 9.832245 10.329524 12.980893 10.313338 2.637100 NA 10.245009 10.097171 9.950690 TCGA-BH-A0EB 69 0 NA 745 breast stage ia t1c n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white NA 1 1 4 NA 6 2 4 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.774378e-07 24.1379310344828 10.3448275862069 3.44827586206897 41.3793103448276 20.6896551724138 10.45263548 9.99540565 11.73622873 9.40016816 8.44038044 9.38248353 9.87359299 9.94569343 9.58964590 13.84659848 10.84959432 10.62827419 -0.01770913 12.70248858 3.04120793 9.65001847 6.33986781 8.41555334 9.89769710 13.14412982 0.98229087 13.59045488 5.04120793 9.93165602 10.24675817 6.93651192 -0.60274465 13.45235711 9.41207101 0.98229087 8.80674390 7.27079709 -1.60252558 5.26771931 10.11374386 10.58933758 10.81441448 10.97949508 10.22469583 10.85165239 NA 10.93335738 14.61470500 8.50539397 9.25377872 11.72672902 11.30893231 4.01205908 2.78966666 8.99540565 12.49431527 1.56730206 11.31845017 5.33986781 6.99354304 4.78967188 11.02351839 11.74067763 10.68333319 12.00860849 12.61015343 8.60314636 10.96602180 10.75380507 11.25882776 11.06601652 4.56727772 11.71561345 8.73942791 -1.60252558 10.37320111 8.89520506 3.25832293 6.17871265 11.26269976 10.16181011 9.95720814 9.88318243 2.98230913 8.86902837 12.73497500 11.32513104 10.13375500 9.70455385 0.4616100 0.4789000 0.1512900 0.1451200 -0.1717000 0.1416200 0.1533800 0.1477900 -0.1649700 -0.1649700 -0.1813100 -0.1671400 -0.1671400 0.0000000 0.0000000 -0.0052610 0.1506900 0.1506900 0.1469700 0.0788710 -0.0993410 0.0167050 0.0167050 0.0080567 -0.1303100 -0.1303100 -0.1303100 0.0960890 -0.1484900 -0.1742400 -0.1638300 0.1451200 -0.1717000 -0.1781000 0.1416200 0.1416200 0.1533800 0.1477900 0.1589100 0.7100100 -0.5074300 -0.1649700 -0.1692900 -0.1692900 -0.1696500 -0.1545100 -0.1671400 -0.1616600 0.0000000 0.0000000 -0.0045695 -0.0045695 0.1506900 0.1506900 0.1506900 0.1469700 0.0788710 0.0788710 -0.1009200 -0.5075000 0.0167050 0.0167050 0.1411700 -0.1303100 -0.1303100 0.0960890 0.1632500 -0.4870100 -0.4870100 -0.167 -0.167 0.000 0.000 0.151 0.151 0.147 0.000 -0.103 0.194 -0.295 0.000 0.000 0.141 0.141 -0.130 -0.130 -0.170 0.291 0.000 0.000 0.163 -0.487 -0.164 -0.164 0.145 0.145 -0.172 -0.172 0.142 0.142 0.148 0.148 0.694 0.186 -0.165 -0.165 -0.169 -0.169 0.000 0.000 -0.167 -0.167 0.000 0.000 0.151 0.151 0.147 0.000 -0.103 0.194 -0.295 0.000 0.000 0.141 0.141 -0.130 -0.130 -0.170 0.291 0.000 0.000 0.163 -0.487 -0.164 -0.164 0.145 0.145 -0.172 -0.172 0.142 0.142 0.148 0.148 0.694 0.186 -0.165 -0.165 -0.169 -0.169 0.000 0.000 8.49801545 NA 6.11159893 9.82832820 11.51190882 6.49206468 11.30349207 9.07293086 8.88604679 -0.60274465 11.56790414 11.75317629 1.56730206 2.71927107 2.09777933 8.50718374 5.13881856 10.97666901 11.62662256 10.75297951 9.03578912 7.27693674 8.09605782 10.14847862 7.14218672 2.78966666 0.98229087 NA 11.33876758 7.08034748 6.95959514 8.13036824 4.82361690 9.68089290 10.43695759 6.14554500 7.38603750 -1.60252558 7.34279650 12.32882931 7.22072076 7.56727772 -0.60274465 4.54709812 8.43764264 -1.60252558 4.35155060 -0.60274465 6.11159893 4.07232022 4.71928203 10.86419427 0.71931489 8.31173833 10.43421350 10.00144296 5.59702456 10.49176072 12.80912886 8.77997701 2.92092208 3.88921068 11.55706679 3.44174905 NA -0.01770913 NA 13.198127 4.997265 8.433527 12.702489 10.610457 10.852680 13.144130 12.297465 9.419020 10.938692 13.253292 9.090840 8.995406 9.116742 1.397365 7.371768 11.834715 10.8436611 12.0141316 7.7745637 14.1979987 9.2095304 6.8526806 8.8309385 7.9384499 9.8635264 8.0412090 7.7125029 10.8495943 6.6261719 0.9822909 11.0317104 5.1252750 6.0127988 10.8152056 10.3515494 10.9830199 8.9345713 8.7971651 12.0528838 7.2799959 11.4707349 10.8144145 10.8275443 9.8078044 10.8552469 9.1770724 10.8697901 10.5716546 9.2006770 NA 9.9720223 7.7955838 12.4943153 7.2143366 11.3184502 7.9110809 10.1488971 11.0235184 7.2679955 14.0068037 10.4864724 10.8285895 12.9210375 9.6333673 0.3973649 NA 10.8384817 10.3347269 9.3214233 TCGA-BH-A0EE 68 0 NA 943 breast stage iib t3 n0 (i-) m0 female 2007 NA no infiltrating ductal carcinoma 0 white NA 3 2 3 NA 1 1 2 6 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.838026e-06 4.161568e-07 19.4029850746269 47.7611940298507 2.98507462686567 13.4328358208955 16.4179104477612 10.844965 9.824606 11.846933 7.114548 7.958280 9.286795 9.415415 10.416828 10.708485 12.831711 9.858813 10.489168 2.590985 15.302056 4.778613 9.828329 5.266550 8.526970 6.668988 12.569776 -0.578844 10.049507 7.165895 9.746367 11.203855 6.948538 1.880490 10.479709 12.582351 NA 6.580932 7.357699 NA 1.742998 9.711656 9.646871 9.023760 10.188418 9.723700 11.113023 1.228419 9.088173 13.802266 7.431813 9.404055 9.720842 9.389728 4.630516 NA 8.212224 13.093155 -1.579060 11.274371 3.975649 6.375258 5.339925 7.148982 12.366322 9.805305 11.792974 12.089281 4.375255 11.234442 10.618892 10.965784 10.957794 3.465452 11.639170 8.446201 3.006029 10.516458 7.930836 3.516986 3.006029 8.039447 9.468867 9.155771 8.550344 -1.579060 11.713383 13.183910 11.718407 10.312845 10.518764 0.40976000 0.55341000 -0.00052086 -0.00052086 0.00000000 0.16884000 0.00586460 -0.00049183 -0.60310000 -0.58302000 0.63577000 0.27162000 0.28711000 -0.13959000 -0.13959000 -0.13959000 -0.57977000 -0.29088000 -0.29813000 0.55784000 0.11187000 -0.59310000 3.65690000 -0.57029000 0.02023700 -0.16837000 -0.16837000 0.54334000 0.40976000 0.40976000 -0.27054000 -0.00052086 0.00683810 0.00000000 0.16884000 0.16884000 0.00586460 0.00586460 -0.00049183 0.00572560 0.00572560 -0.60310000 0.98975000 0.98975000 0.02374000 0.02374000 0.27478000 -0.60659000 -0.13959000 -0.13959000 -0.13959000 -0.34753000 -0.58929000 -0.29088000 -0.29088000 -1.12900000 0.55926000 0.55766000 0.11063000 -0.28534000 -0.59310000 -0.54590000 -0.00881920 0.02023700 -0.16837000 -0.28308000 0.38853000 -0.07371100 -0.58134000 -0.288 -0.288 -0.140 -0.140 -0.589 -0.589 -0.311 0.551 0.112 0.239 -0.046 -0.546 -0.546 0.696 0.000 0.000 -0.168 0.410 0.410 0.260 0.543 0.869 0.000 -0.266 -0.266 0.000 0.000 0.000 0.000 0.169 0.169 0.000 0.000 0.000 0.000 -0.603 -0.603 0.966 0.000 0.000 0.000 -0.288 -0.288 -0.140 -0.140 -0.589 -0.589 -0.311 0.551 0.112 0.239 -0.046 -0.546 -0.546 0.696 0.000 0.000 -0.168 0.410 0.410 0.260 0.543 0.869 0.000 -0.266 -0.266 0.000 0.000 0.000 0.000 0.169 0.169 0.000 0.000 0.000 0.000 -0.603 -0.603 0.966 0.000 0.000 0.000 9.35990568 NA 4.83045309 9.42106126 13.52836011 6.67981505 11.25750618 6.86130779 8.59271341 NA 14.38339250 10.32884577 0.42104821 NA -0.57884404 6.84312586 4.14898290 12.32456660 11.26105233 10.82753206 10.57619578 5.37525843 9.01351837 9.94511327 6.27904221 3.42106168 2.00601071 NA 11.22135457 4.64987983 5.43228800 7.44065161 7.31587865 8.31132555 10.21547718 -1.57905954 8.43786940 NA 5.44342763 12.27748682 7.57587955 6.96795593 NA 0.00604663 8.50719762 5.13530502 2.42104821 -1.57905954 4.68785015 3.91323411 2.59098519 11.00977593 1.42104821 9.53935348 11.06266148 9.54905553 3.94462422 9.15238043 13.41894642 6.30980374 3.32794599 3.50853007 9.96843784 -1.57905954 NA -0.57884404 3.32794599 8.0412813 7.8389140 9.1395941 15.3020557 9.8983136 11.6874086 12.5697762 7.9794818 9.3992497 8.9679556 12.9129770 8.5503443 8.2122240 10.5438893 0.4210482 6.2089639 11.4822637 10.867111 13.263952 4.796099 13.966537 9.558693 5.228415 8.436476 8.118029 9.715843 5.872272 4.398344 9.858813 11.463405 -1.579060 10.932814 6.580932 9.084050 11.998490 10.396909 12.112805 8.757568 9.820339 7.568266 5.570809 12.365732 9.023760 11.539516 9.442041 10.911661 9.377437 7.954391 10.342158 8.035771 6.916916 9.938357 9.273692 13.093155 6.072112 11.274371 8.123234 9.527624 7.148982 8.254078 14.349533 11.077486 10.529586 11.815524 11.323813 3.706464 -1.579060 10.621960 11.269489 8.871241 TCGA-BH-A0EI 51 0 NA 1926 breast stage iia t1c n1a m0 female 2008 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 2 2 1 NA 5 3 1 1 5 4 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.040392e-07 40 6.66666666666667 0 33.3333333333333 20 10.7559216 10.2446132 11.9989733 10.0177740 8.4349601 8.3757980 9.8248218 10.5048892 9.0549179 13.6470655 11.7965905 10.9057641 1.2125693 12.6636928 4.1511688 9.0736545 6.3418506 8.7684348 9.7975301 12.9730103 0.2125071 14.8721919 2.5344850 9.1226406 10.5303570 9.5434845 -1.3725799 10.4228330 8.4106031 1.9495349 7.9807520 8.7478429 3.1511607 5.0026440 9.9467126 10.0617119 8.7190403 11.4146914 9.5487021 11.8899936 -1.3725799 9.7912547 14.8855453 8.3685492 9.7690480 11.1821939 11.8888185 5.5583411 NA 9.1687017 10.9870801 -1.3725799 11.3849951 8.6963834 5.2275178 4.8370602 10.8044015 12.0775275 9.9917397 12.3604084 12.6587031 8.2624162 11.1239595 10.9599214 11.6800032 11.5901396 9.4368265 11.4832522 12.8489656 -0.3723932 10.9865309 8.9585220 3.0206089 4.6499718 9.8473786 10.1677331 10.5431110 10.0369960 3.6276068 8.1194584 13.0073218 11.1896089 11.0324805 9.8025307 0.00041593 -0.00180140 0.00235810 0.00489190 0.01140000 0.45820000 -0.00027724 -0.57186000 3.65690000 0.01810300 0.01810300 -0.00719580 -0.00719580 0.47084000 0.40494000 0.44799000 0.00000000 0.00000000 -0.60379000 -0.00263220 -0.01354000 -0.56763000 -0.01972600 -0.01972600 -0.04007300 -0.04007300 -0.04007300 0.43058000 -0.02430600 0.00041593 0.00194180 0.00235810 0.01140000 0.01140000 0.28016000 0.01405900 -0.00027724 -0.55136000 0.00430210 -0.00415460 -0.00415460 -0.57989000 -0.01230000 -0.01230000 -0.01230000 -0.01230000 -0.00719580 -0.00719580 0.45294000 -0.52685000 -0.56555000 -0.56555000 0.00000000 0.00000000 0.00000000 0.00346870 -0.00263220 -0.00263220 -0.01354000 -0.02767100 -0.56763000 -0.01972600 -0.00539920 -0.04007300 -0.04007300 0.43058000 -0.01725400 -0.04170200 -0.04170200 0.000 0.000 0.405 -0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.266 0.000 -0.553 -0.553 0.000 0.000 -0.576 0.000 0.000 0.000 -0.185 0.119 0.000 0.000 0.405 -0.161 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.266 0.000 -0.553 -0.553 0.000 0.000 -0.576 0.000 0.000 0.000 -0.185 0.119 8.1609348 NA 5.1511688 10.6811916 11.0854989 6.5701198 9.6105986 8.6620602 8.6191977 2.2125693 11.1643379 11.4490183 3.9851543 1.4349351 3.7568845 8.1744993 4.6936932 9.5374982 10.7677957 10.1619080 9.4453882 3.6276068 8.6430203 10.2791053 5.4349584 2.6276068 1.7975111 NA 10.4813045 5.1353994 7.1974605 9.1344084 5.5224230 10.2100152 10.4052714 4.5344974 8.4397823 NA 8.4509724 12.9526996 8.8419241 7.2349352 -0.3723932 1.6276068 8.3538230 4.1511688 3.0870385 2.2125693 1.2125693 4.4175960 -0.3723932 10.0010140 -1.3725799 6.9851566 10.6353331 9.6855968 4.0199243 10.4385782 11.8411650 6.9037300 2.3280322 3.8370552 10.9469949 3.1511607 NA 3.7150697 -0.3723932 15.590184 5.725638 8.417139 12.663693 10.201725 10.134904 12.973010 12.514826 9.712414 10.935944 12.816426 9.022068 9.168702 9.251486 NA 7.919926 12.499703 11.335827 11.715896 7.053869 13.774651 8.784952 4.300029 8.681531 8.743949 10.457268 5.522423 6.827278 11.796590 7.234935 7.564243 11.196036 9.461286 7.379818 12.749624 10.118456 10.617000 9.691674 8.971901 12.543951 3.271456 10.201072 8.719040 10.200305 8.908376 10.912140 9.682888 10.408555 10.473095 8.945018 1.212569 8.388208 8.029509 10.987080 3.797532 11.384995 9.863619 10.135895 10.804402 7.041233 14.269149 9.779256 9.529980 12.629629 10.429313 -1.372580 3.271456 10.792826 10.419989 9.617000 TCGA-BH-A0GY 67 0 NA 923 breast stage iia t2 n1 m0 female 2008 NA yes infiltrating ductal carcinoma 3 white NA 3 2 4 4 4 3 2 4 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 34.6153846153846 15.3846153846154 3.84615384615385 23.0769230769231 23.0769230769231 9.6725146 10.0187859 11.4364074 9.1163557 8.0004880 9.1522369 9.6572902 9.9579577 10.4599194 14.0886974 10.2219728 10.5093984 5.6836319 12.2883627 1.8507594 9.6772891 3.8507394 8.9328897 8.2770056 11.9230407 2.7576207 13.3663173 3.6056247 9.8403834 11.4880448 4.5231667 -1.1491206 10.1227871 11.4077256 2.4357086 7.2214276 7.6709196 2.9382105 3.8049415 10.1568023 10.7291748 10.1917034 11.6659238 9.8136366 11.6273793 5.1175288 10.1983620 14.4668012 8.1487115 8.7917884 11.1782933 11.2306604 3.4357086 0.4357353 10.6946617 11.1525226 NA 10.7542459 5.3264726 6.7333842 4.8049364 10.6333294 11.7220684 10.4399236 12.8834752 12.6891567 7.2558821 10.4891765 9.6766057 10.8154425 10.8358710 4.8280222 11.2165163 9.1022230 -1.1491206 10.6143680 9.5555089 3.2243953 5.5511807 11.2596010 10.0577550 10.1810973 10.0735355 2.4357086 7.9696818 12.7448005 11.4050896 9.8514449 8.7873786 0.4082100 0.4082100 -0.0086316 2.8486000 -0.0284090 -0.0075270 0.0045991 0.0045991 3.6569000 1.3958000 3.6569000 0.7246300 -0.0394480 0.3253700 0.3253700 0.3253700 0.3469100 0.3469100 0.0226930 -0.0303320 0.3506500 0.0121810 0.0121810 0.0121810 -0.4154600 0.8686300 2.8908000 2.6446000 -0.4280400 1.0893000 -0.0217010 -0.0086316 -0.0284090 -0.0284090 -0.0075270 0.0000000 0.0045991 0.0045991 0.0135760 0.7452900 0.3231100 -0.0815250 -0.4429200 -0.4429200 -0.4429200 -0.4305800 -0.0394480 -0.0394480 0.3227900 0.3253700 0.3253700 0.3253700 0.3469100 0.3469100 0.3469100 0.0277340 -0.0288190 -0.0288190 -0.0436560 -0.4542100 0.0121810 0.0121810 -0.4287000 0.3439800 0.8927900 1.4349000 0.3447900 -0.3759900 -0.3759900 0.710 0.000 0.325 0.325 0.347 0.347 0.000 0.000 0.000 0.277 -0.428 0.000 0.000 -0.429 -0.429 0.168 0.168 -0.427 -0.019 1.435 0.298 0.328 -0.376 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.745 0.000 0.676 0.000 -0.443 -0.443 0.144 0.144 0.710 0.000 0.325 0.325 0.347 0.347 0.000 0.000 0.000 0.277 -0.428 0.000 0.000 -0.429 -0.429 0.168 0.168 -0.427 -0.019 1.435 0.298 0.328 -0.376 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.745 0.000 0.676 0.000 -0.443 -0.443 0.144 0.144 8.2643685 NA 5.9168301 10.3163070 11.5187392 6.4984152 9.6613123 9.7120525 8.0222929 2.9382105 11.9080555 12.4459981 3.0206622 0.8507194 1.1726795 9.4543670 4.0206622 10.4846441 11.8447404 10.6693228 8.4873654 -0.1492806 8.9774451 9.0318928 6.6516401 10.2093918 5.7333842 0.4357353 11.0356160 6.5649863 6.1816572 8.7272575 8.9087325 8.8294510 10.1978083 2.1726795 8.2978237 NA 6.4506537 11.7692312 7.2038873 7.5089523 NA 5.0206666 8.1522367 1.8507594 3.8049415 NA 5.3101729 3.4992081 3.0206622 11.3572962 3.8049415 8.5955745 10.3460960 10.7009275 5.0206666 10.3264741 12.7020993 8.8450942 4.5786610 4.0601944 9.9275562 5.6189258 NA -1.1491206 3.4945948 12.556371 8.005559 8.219247 12.288363 9.734148 10.375772 11.923041 11.412506 9.177271 10.823720 12.689452 11.304011 10.694662 8.638643 NA 7.159080 12.721298 10.606880 12.257743 5.828020 12.991403 10.475993 6.293685 9.887601 8.110484 9.953976 6.397635 9.458071 10.221973 8.055312 1.435682 11.080461 5.000487 7.642815 10.612707 9.954028 10.716087 9.317327 9.165890 10.927890 5.959265 11.777737 10.191703 10.569273 10.208293 11.075044 9.636193 10.640274 10.285890 9.756880 NA 8.961733 7.298940 11.152523 6.382123 10.754246 7.424388 10.225237 10.633329 7.186131 14.376506 9.987732 10.164757 12.606150 11.178293 4.605631 2.172680 10.238219 10.215970 8.910085 TCGA-BH-A0GZ 62 0 NA 328 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma 1 white NA 1 1 2 5 NA NA 1 4 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 9.09090909090909 18.1818181818182 9.09090909090909 45.4545454545455 18.1818181818182 9.79065721 9.67192349 10.72925663 7.82155142 8.61486515 9.60513223 8.68037500 10.18742878 9.99419063 14.14282964 9.02371666 10.49109689 2.10882551 12.63739581 3.02637515 9.23122982 7.52010869 8.03430542 8.95988808 13.26765320 1.26080853 13.30768742 4.26083864 10.63048592 10.37040581 5.84579863 1.26080853 8.76863096 10.73980803 -1.06099915 6.70045914 7.42674781 2.93890678 4.18683330 9.19511674 10.52527884 10.68079640 10.34776862 9.57008528 10.81580876 2.74626976 11.23582439 14.51110507 7.71997263 8.93890825 10.84166010 10.76227539 5.10883387 4.26083864 8.07845933 11.00802223 -1.06099915 11.20217734 5.04743369 5.43076029 4.43076029 9.89673579 11.71616350 10.87075370 11.65250948 12.57247106 9.33872012 10.99079684 10.52340092 11.43201306 9.71944786 4.10883387 11.76585382 11.85702602 -0.06114966 10.30139994 9.03166537 4.22431045 3.26083864 11.51751675 9.59979553 9.90035785 10.14347926 3.74625901 8.91475615 12.54785598 11.03298586 10.23180486 9.33122555 0.65381000 0.65381000 0.00578060 0.00000000 -0.69291000 0.00703230 0.00369620 0.00369620 0.25278000 0.25278000 0.26524000 -0.00655500 0.00300190 -0.00018879 1.45230000 1.98410000 -0.00337440 -0.00337440 -0.71621000 0.00092045 0.00216910 -0.00169490 -0.00169490 0.00036575 -0.00821240 -0.00821240 -0.00821240 -0.00862650 -0.68991000 -0.69670000 -0.01028200 0.00578060 0.01121000 -0.69291000 0.00092045 0.00092045 0.00369620 0.00369620 0.00369620 0.00258550 0.00258550 0.25278000 0.00272430 0.00272430 -0.71367000 -0.68518000 -0.69598000 -0.72078000 -0.00018879 -0.71242000 -0.71170000 -0.00724570 -0.00337440 -0.00337440 -0.00337440 -0.69073000 -0.01207400 0.00842390 0.00216910 0.00244670 -0.00169490 -0.00169490 -0.00641680 -0.00821240 -0.00821240 -0.00862650 -0.00060459 -0.71438000 -0.70202000 0.000 0.000 0.000 0.000 0.000 0.000 -0.691 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.692 -0.038 0.000 0.000 0.000 -0.702 0.000 0.000 0.000 0.000 0.000 -0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.253 0.253 -0.657 -0.657 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.691 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.692 -0.038 0.000 0.000 0.000 -0.702 0.000 0.000 0.000 0.000 0.000 -0.693 0.000 0.000 0.000 0.000 0.000 0.000 0.253 0.253 -0.657 -0.657 -0.120 -0.120 9.9410200 -1.0609992 6.4065146 10.5522372 11.0562266 7.8942096 11.2355376 8.7995763 9.4565776 1.5238630 11.7464644 11.2511927 3.2608386 4.6113318 3.5238756 8.4896549 4.4624712 9.7781120 10.7654567 11.0672248 9.9046924 3.8458011 8.0343054 10.9654316 6.2517910 9.0899247 3.5238756 NA 10.6908706 7.1820824 7.6219024 7.1237831 5.5087646 10.4159530 10.5764387 1.9389256 8.8473008 NA 8.3247706 11.5721305 8.2103713 8.8887347 0.5238630 4.7717958 8.8503000 5.8814224 4.7968884 NA 4.0263752 6.0179664 2.6393479 10.5219909 1.5238630 9.3063229 10.3937215 10.1200604 4.8696444 10.4342635 10.9064947 7.4585444 0.9389256 3.3983367 13.1241708 1.7462698 NA 3.3983367 2.1088255 13.614534 5.881422 8.170129 12.637396 9.378739 11.482665 13.267653 11.697756 8.412614 10.173127 13.002388 8.682060 8.078459 9.444720 -1.060999 7.485803 11.546701 11.258016 12.296185 7.031665 12.741324 8.779686 5.186837 8.542534 8.430761 9.754836 5.508765 7.394235 9.023717 8.692125 1.746270 10.733730 4.553619 8.114233 10.363074 9.874810 11.090559 8.073335 9.150797 9.059146 4.365175 11.980655 10.680796 10.610449 9.165320 10.829932 9.494456 9.877018 10.749881 7.589960 3.796888 8.636328 7.280093 11.008022 5.224310 11.202177 8.499241 10.513923 9.896736 6.215032 13.360841 10.044817 10.090559 12.190539 10.462960 NA NA 9.771798 9.359921 9.378739 TCGA-BH-A0H0 69 0 NA 461 breast stage ia t1c n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white NA 1 1 1 1 NA NA 1 1 5 4 NA NA 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 2.080784e-07 16.6666666666667 11.1111111111111 0 44.4444444444444 27.7777777777778 10.648411 9.822737 12.798417 10.113724 8.879486 8.331554 11.120716 9.206352 10.732055 14.614219 7.201744 10.699738 1.806778 12.940373 4.037083 9.674303 5.982864 8.514676 9.601202 13.161248 NA 14.196666 7.956534 8.842106 11.172268 9.427147 NA 10.404982 9.151424 3.391754 10.095741 6.025210 NA 4.565780 9.935673 11.223665 9.019236 11.423901 9.752905 11.505491 1.565792 11.208814 14.866404 6.531143 10.114425 11.243658 10.337868 3.834266 5.382470 9.264325 9.272510 NA 10.618346 3.060549 4.764558 3.060549 9.876598 12.138565 10.222690 11.843805 13.216504 8.209634 11.167887 11.271571 11.746026 11.571785 5.437264 11.997181 12.740420 NA 9.910881 10.335165 3.398391 4.172440 10.016989 9.603699 10.602951 11.442853 1.913684 5.266217 12.505624 13.156153 10.406985 9.390014 1.4316000 1.4316000 -0.0084385 -0.0084385 -0.0048461 0.0000000 0.0026357 -0.8590000 -0.8395400 1.4680000 1.4574000 0.0120970 0.0120970 0.0123760 -0.8384900 -0.8384900 0.0037465 0.0037465 -0.8429100 0.0143300 -0.8374400 -0.8217100 0.0266540 0.0266540 0.7879400 0.7794500 0.7867800 0.0238470 0.0043854 -0.0202750 -0.0136910 -0.0084385 -0.0048461 -0.0048461 0.0000000 0.0000000 0.0026357 -0.8590000 -0.8590000 0.0012481 -0.0013692 -0.8395400 0.0081959 0.0081959 0.0081959 0.0081959 0.0120970 0.0120970 0.0141900 -0.8384900 -0.8471500 -0.8485100 0.0037465 0.0037465 0.0037465 -0.8429100 0.0143300 0.0143300 0.0232860 -0.8249700 -0.8217100 0.0266540 0.0237060 -0.7957800 0.7867800 0.0238470 0.0168450 0.0472680 0.0472680 0.000 0.000 -0.838 -0.838 0.000 0.000 -0.843 0.000 0.000 0.000 -0.825 -0.822 0.000 0.000 0.000 -0.766 -0.766 0.000 1.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 0.000 0.000 0.618 1.457 0.000 0.000 0.000 0.000 0.000 0.000 -0.838 -0.838 0.000 0.000 -0.843 0.000 0.000 0.000 -0.825 -0.822 0.000 0.000 0.000 -0.766 -0.766 0.000 1.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 0.000 0.000 0.618 1.457 0.000 0.000 0.000 0.000 7.8033142 NA 5.5409758 10.8336289 11.5940610 8.5980395 11.2262603 8.6208239 9.0480691 4.1063483 10.1024669 11.5879934 2.8612408 4.9392360 3.3157981 6.7136766 2.5657678 9.3655014 10.6807036 10.8344797 9.7565008 -0.8937857 8.2265846 9.2800237 6.6220460 5.7062598 NA NA 10.1828282 5.1287141 2.6913108 7.1035260 4.5820802 11.3824593 11.2320829 3.4638971 10.0060811 NA 5.8877056 12.1649303 9.5466968 6.9169185 NA 9.6719247 9.0971596 6.6101729 2.8067777 -1.8937857 4.1063483 5.2902290 2.1063483 10.1165250 NA 6.8274456 10.5660343 10.0992849 3.6299044 9.6623736 11.9078529 7.5241993 2.1063483 2.4986594 10.8539102 0.4282496 -0.8937857 4.1724395 0.9137224 11.565394 6.025210 8.782304 12.940373 9.616121 10.872875 13.161248 11.580686 8.241607 10.714139 12.688018 11.175796 9.264325 9.273765 5.095030 7.532612 12.296943 10.7261080 12.0794161 8.3435566 12.6645269 8.7483982 4.8342662 8.9658812 9.7434243 10.3419480 5.6141415 7.9486966 7.2017436 4.9643293 -1.8937857 11.3176265 8.0341244 8.2689897 8.0222258 8.3940588 10.9483039 7.2382031 8.7707937 12.6189636 4.9767119 10.9694662 9.0192360 10.5260435 9.2750187 11.5569135 9.6889591 11.9035014 10.9847807 8.9305097 NA 8.9515464 5.0702820 9.2725097 4.9007606 10.6183462 2.9643247 10.5591026 9.8765975 8.6387023 13.2865277 10.2781488 9.9293157 11.4704812 9.5315624 0.9137224 0.4282496 10.9941384 10.4764890 10.4274290 TCGA-BH-A0H3 46 0 NA 1928 breast stage i t1c n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 5 NA NA 3 4 4 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 7 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 6.935946e-08 25 16.6666666666667 0 25 33.3333333333333 10.83478357 10.39402896 12.04437472 10.08415929 8.50262339 9.45366964 9.82609114 9.78393901 10.02238571 12.80900155 11.39472066 10.71110527 4.04062069 12.96427050 3.89175940 9.43764701 6.88389692 8.93900173 10.93258498 12.65864815 2.53811597 14.23928429 5.53812218 9.56109411 10.48486608 5.06863642 -1.63173452 11.31528624 8.91219566 3.53812839 7.48713821 7.60181684 0.95315347 5.37942342 10.26452963 10.41190815 10.27846526 11.36007336 10.31619938 11.77586333 3.57764635 11.16241002 14.94116387 8.72458309 9.79708076 10.50037564 11.75944083 5.05469656 4.17554855 9.40574416 11.74771098 -0.04677202 11.04899629 5.52806804 6.44501319 5.61612535 10.38570162 12.01801475 10.74323666 12.78545643 13.03014231 8.15283190 11.24720604 10.95849421 11.54577251 11.52680692 5.63498235 12.89396273 12.25656000 -1.63173452 10.25274939 9.32384718 3.58077261 5.53812218 11.19036973 10.54312290 10.10671172 9.89665134 3.79445746 8.70135256 13.13715690 12.84942907 10.01610529 9.76800927 0.87787000 0.87787000 0.00013863 0.00013863 -0.00041585 0.00847430 0.00110930 0.00110930 0.03834700 0.03834700 0.03622900 -0.00207840 -0.00207840 0.00000000 0.00000000 0.00000000 0.00124810 0.00124810 0.01586600 0.00136960 0.00235810 -0.00857660 -0.00857660 -0.00857660 -0.00512270 -0.00512270 -0.00843850 -0.00193990 0.00791750 -0.00622860 -0.00110870 0.00013863 -0.00041585 -0.00041585 -0.00484610 -0.00484610 0.00110930 0.00110930 0.00110930 0.01233200 0.01684500 0.04741000 -0.00290910 -0.00290910 -0.00290910 -0.00290910 -0.00207840 0.00346870 0.00000000 0.00000000 0.00000000 0.00000000 0.00124810 0.00124810 0.00124810 0.01586600 0.00346870 0.00346870 -0.00446230 -0.48323000 -0.00857660 -0.00857660 0.04244900 -0.00512270 -0.00843850 -0.00193990 -0.00055444 0.00180300 0.00180300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.470 -0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.878 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.470 -0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.878 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3426116 NA 5.5776494 10.0555730 11.5412497 6.5844575 11.3064904 10.0830137 8.2878352 3.6535989 11.6595119 10.8524235 1.6901042 0.9531535 3.1755565 9.1883762 4.0406207 10.6887157 11.3992091 11.2441386 9.3440453 3.0120501 8.2308346 10.0599408 6.7775880 6.2323826 NA NA 11.0223857 7.2230653 7.6901251 8.6466465 6.3961030 9.5939770 10.9218265 4.6901265 7.7519015 3.8917594 8.4622749 13.2525109 8.0228333 7.3653767 NA 3.6535989 8.6628179 1.3682096 4.2989369 -0.6317345 5.5873650 5.1901644 3.4974846 10.3289233 NA 9.3303704 10.4682025 9.9413710 4.7605137 9.6622436 11.9158148 8.6867400 2.1755565 3.3681956 11.7653370 1.6901042 -0.6317345 0.3681537 1.6901042 13.0915313 3.9227877 8.5654140 12.9642705 9.8645517 10.7688099 12.6586482 12.2333505 9.4979438 11.1249621 13.4541261 11.3440452 9.4057442 6.8759913 -0.6317345 7.3223933 11.6405354 11.4470152 11.5911431 7.7902618 13.5055070 9.3667877 6.7860500 9.0755564 8.3004121 10.4641447 6.3339818 6.5921984 11.3947207 5.5776494 4.8276311 12.5931033 6.6628179 5.0766617 12.9432046 10.6428666 10.7629279 8.8077165 7.9773761 12.5364776 6.4450132 10.6848719 10.2784653 10.3703090 9.7781185 11.3689015 9.7240989 10.7262990 10.6901254 9.4016202 1.6901042 9.3478583 7.4464548 11.7477110 6.2989350 11.0489963 8.5115803 10.7868036 10.3857016 7.6742587 14.4478279 10.1163901 10.6033139 13.1164949 10.0995163 -0.6317345 -0.6317345 10.7416062 11.0770656 9.9856646 TCGA-BH-A0H5 45 0 NA 1620 breast stage i t1c n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 3 NA 2 2 7 4 5 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 6.935946e-08 16.6666666666667 50 0 16.6666666666667 16.6666666666667 10.6075243 9.5723004 12.0491953 9.5991487 8.9475718 10.1740428 9.9198162 10.0888690 9.4197426 12.2569096 11.1325682 10.6913390 0.1750455 12.5975728 2.6774857 9.5295990 6.6721693 9.0718192 9.1945732 12.0405868 2.0494565 12.8035798 4.8379483 9.8651434 10.0798678 7.8188384 0.5900510 12.4102956 9.1311164 3.2904539 8.6695048 7.5118610 -1.4100448 6.4908862 9.9688565 10.0094534 9.9688565 11.5012246 10.0943423 10.9563421 10.6075243 10.6473347 14.8722939 8.7072473 10.3046861 11.4147798 10.9417873 4.8754213 4.1446093 9.0848753 12.2500158 NA 11.0394265 7.3713794 8.7167245 5.4355086 10.5730135 11.8742656 10.5391170 11.7239648 12.7821585 7.7115534 10.7752051 10.5187381 11.3249411 10.9809949 4.3179408 12.2283427 11.4151775 NA 10.5066458 9.2001220 3.3978851 8.8719499 10.9293132 10.2557999 10.1316005 9.9999411 3.4969097 8.9453710 13.2032914 14.0115917 10.2952202 9.5014119 0.06494000 0.06494000 0.00166420 0.00166420 0.00000000 -0.00325950 0.00027728 -0.00151950 0.00124810 0.00124810 -0.00345950 -0.00027724 0.00485790 0.01447000 0.01447000 0.01447000 -0.00310230 -0.00069303 -0.00757200 0.00013863 0.00471900 0.00291330 0.00291330 0.00291330 0.00555290 0.00137080 0.00137080 -0.00318590 0.06494000 0.06494000 -0.00110870 0.00166420 0.00000000 0.00000000 -0.00325950 -0.00325950 0.00027728 -0.00151950 -0.00232440 -0.00459700 0.00027728 0.00124810 -0.00138580 -0.00138580 -0.00138580 -0.00138580 0.00485790 0.00485790 0.01447000 0.01447000 0.01447000 -0.00798320 -0.00310230 -0.00069303 -0.00069303 -0.00290910 0.00013863 0.00013863 0.00471900 -0.10366000 0.00291330 0.00291330 0.00041593 0.00555290 0.00137080 -0.00318590 -0.01409000 -0.04034500 -0.04034500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1446088 -0.4100448 4.7397671 10.3247295 11.3691236 7.6923895 10.8245380 10.2895273 9.3576582 4.2624482 12.1212795 11.2475103 2.7599441 5.1135838 3.0494565 8.2356782 4.7599441 12.5108379 11.3306439 10.3929401 9.1945732 3.5442133 8.0978146 10.6614822 10.2102397 6.7397671 -0.4100448 NA 11.1731026 7.4542063 7.9186945 8.0838755 7.1787346 10.4085621 10.4034002 5.3042664 8.8152273 0.1750455 8.4005917 12.9420633 8.2065685 7.0204722 0.1750455 2.1749816 8.4848378 NA 4.3973717 0.1750455 9.2437607 5.8077362 7.0162846 10.4893769 -0.4100448 8.8367605 10.5500218 9.7384965 7.6854167 11.5502029 15.0105394 9.7866220 8.1579759 6.3382122 10.5687303 -0.4100448 -1.4100448 -0.4100448 0.9119600 12.0035592 5.6880516 8.6708375 12.5975728 10.7590053 10.5140901 12.0405868 11.5336336 9.3432366 10.9170111 13.4821358 11.0725758 9.0848753 7.9431665 -0.4100448 7.4480006 10.9091274 11.018118 11.792603 6.324730 13.711228 9.106695 9.639188 8.430798 8.157976 10.066022 9.889800 8.660141 11.132568 6.907433 4.290461 11.020734 7.290459 7.945657 10.783853 11.492583 10.479144 9.766193 8.276520 11.583489 9.612388 11.309595 9.968857 11.013136 9.812211 10.600898 9.909692 10.699198 10.679801 8.951964 NA 10.208896 7.975882 12.250016 10.776753 11.039427 5.698544 10.899496 10.573013 7.457360 14.180926 10.237928 10.867307 12.983410 10.920937 9.084875 5.532535 10.157976 9.977499 9.490132 TCGA-BH-A0H6 82 0 NA 747 breast stage i t1b nx m0 female 2008 NA yes infiltrating ductal carcinoma 0 white NA 1 1 3 1 4 3 1 1 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.387189e-07 26.6666666666667 20 6.66666666666667 13.3333333333333 33.3333333333333 9.6204116 9.6263455 11.4240454 9.3613852 8.2562479 8.0965707 10.2567262 9.6241232 9.8715044 13.3377896 11.2634054 10.0399019 3.5558039 12.5177069 2.6047119 10.1679777 5.9552151 8.6808208 9.8845605 13.0129768 2.0197731 12.8690040 6.3125363 9.9661295 11.4997376 2.7852994 NA 10.9160998 9.1966764 1.8677384 9.1886781 7.7340010 -1.3022262 4.6520218 9.3497757 10.1876752 9.8392958 11.8643041 10.0191916 11.2137734 9.6418072 11.6699095 15.0097351 7.4939963 9.8418481 11.6639721 10.7786447 3.5558039 2.3982683 8.9820729 11.3753266 NA 11.2085914 7.0242565 4.7639161 4.4257480 9.8570678 11.4740546 10.1464597 13.3734535 12.8180651 8.0016080 11.5429252 10.9888972 11.5442970 10.6957124 3.9072849 11.5253684 13.0740883 -0.3022262 10.2184459 10.1866715 3.2213822 4.5804711 10.7524315 10.9078897 10.3751063 11.1651780 4.0197553 8.8639902 13.4495282 12.7934715 9.6017090 9.5409632 0.0077477 -0.0053085 0.0132130 -0.0202220 -0.0183190 -0.0128510 -0.0095426 -0.0095426 2.0940000 3.2509000 3.2261000 0.0077783 0.0077783 -0.0065050 -0.0018014 -0.0018014 0.0070826 -0.0012776 -0.0156200 0.0098669 0.0418830 0.0387710 0.0387710 0.0387710 0.0520990 0.0520990 0.0520990 0.0291840 0.0077477 0.0077477 0.0543760 -0.0055375 0.0190830 -0.0208240 -0.0128510 -0.0128510 -0.0095426 -0.0095426 -0.0095426 0.0084743 0.0000000 -0.8131000 0.0019418 0.0019418 0.0019418 0.0019418 0.0077783 0.0077783 0.0459910 -0.0018014 -0.0018014 -0.0018014 0.0070826 -0.0012776 -0.0012776 -0.0110600 0.0098669 0.0098669 0.0168450 -0.8026000 0.0387710 0.0387710 0.7717600 0.0520990 0.0520990 0.0083351 0.0055529 0.0475520 0.0475520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.127 1.324 0.000 0.000 -0.799 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.281 2.094 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.127 1.324 0.000 0.000 -0.799 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.281 2.094 0.000 0.000 0.000 0.000 8.7558189 NA 5.5433165 10.9887100 11.0761221 6.6355251 10.8721287 8.7710315 8.6061146 1.2827956 11.7590296 10.9599044 3.2213822 3.5051796 4.3702550 8.1776074 4.0901421 9.3180470 11.4397155 9.9236371 9.1219934 5.4392940 7.6607233 10.2676828 6.0465544 6.3702532 -1.3022262 NA 10.5393916 6.7852903 8.2733662 7.6017091 6.7367456 10.8893399 9.9091072 2.0197731 8.2016530 NA 7.5743445 11.7976681 8.8576986 7.7531098 NA 6.6107163 8.0922899 NA 3.2213822 1.5051796 2.1572701 5.7249585 1.2827956 10.6571047 -0.3022262 6.8974994 10.6461944 9.4593783 3.6978294 8.9751145 11.6187383 7.1072181 1.5051796 3.9457575 10.6988835 2.0197731 -0.3022262 NA 1.2827956 13.6856255 5.0016086 8.8938145 12.5177069 10.1990922 10.3618300 13.0129768 12.0839591 9.0597709 10.4535494 12.6914733 10.1098677 8.9820729 9.1500684 0.2827363 7.4460204 12.0172171 11.013260 12.248454 7.763916 13.478827 9.209580 8.006166 9.057577 7.811569 10.406424 6.046554 4.742222 11.263405 6.634465 1.019773 10.567807 6.452714 5.885674 11.869160 10.579324 10.505182 8.972788 9.034334 11.799311 3.157254 12.449366 9.839296 10.282790 9.739486 12.045033 10.156234 10.644368 10.180131 9.150068 NA 9.585551 6.906647 11.375327 4.124088 11.208591 8.601709 10.287010 9.857068 7.260070 13.363496 10.168486 10.174067 12.390661 10.839934 -1.302226 2.398268 10.671883 9.826466 9.778645 TCGA-BH-A0H7 65 0 NA 702 breast stage iiia t1c n2a m0 female 2008 NA yes infiltrating ductal carcinoma 6 white NA 1 2 1 1 5 3 1 2 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.81477e-07 32.6086956521739 26.0869565217391 2.17391304347826 21.7391304347826 17.3913043478261 9.2924410 9.9234905 11.6556194 9.5804361 8.4765636 9.4285706 9.2346484 9.7907587 9.9752261 14.5302754 10.9028591 11.0510723 2.4805495 12.3539005 0.9780492 9.7843276 2.2004416 7.6854055 8.3930841 11.9111224 0.9780492 12.7648607 3.6410142 9.3650300 11.7104967 7.1711608 1.8525183 9.4140641 10.4067557 3.0369428 6.7811013 8.2322880 -0.6069133 3.6784889 9.2220138 10.1919608 7.6267034 11.4861714 9.0943905 10.5149413 0.9780492 9.8035354 14.7092065 8.0474157 9.7384894 11.1732137 10.8801704 3.7150147 6.1210050 8.9254399 11.6745795 -1.6069133 11.1746487 4.1210071 4.9476708 5.2634476 10.0637403 11.5936762 10.1433724 12.5444178 12.7201454 9.0342328 10.6767513 10.0034538 11.6210008 10.8008829 4.0935264 11.7045486 9.3341316 -0.6069133 10.0396428 10.2841083 2.2669064 4.7150147 10.1064706 9.4320031 9.8753878 11.2180428 3.0935264 7.2541707 12.3437311 10.6980057 10.2672970 9.7002849 0.656630 0.716030 -0.590390 0.254330 1.092300 0.125450 0.285800 -0.601380 1.067800 0.269700 3.306400 0.296600 -0.141680 0.288500 0.290240 0.302980 -0.110900 0.689430 -0.206470 -0.120460 -0.447710 0.377300 0.377300 0.126530 -0.536220 0.304250 0.281050 2.791600 -0.107230 -0.133290 0.715840 -1.292900 0.272530 0.048120 0.336740 0.429570 0.285800 -0.599250 -0.601380 0.615340 -0.033814 -1.292900 -0.578220 -0.588040 -0.145670 -0.074144 -0.141680 -0.141680 0.557080 -0.134450 -0.504630 -0.485750 -0.125640 0.681050 1.202500 -0.157840 -0.127630 -0.112860 -0.454790 0.305530 -0.423550 1.223700 -0.504840 -0.548950 -0.537330 1.070600 -0.248250 -0.575750 0.351370 0.155 -0.142 -0.216 -0.505 -0.120 0.561 -0.165 -0.128 -0.455 0.000 0.182 -0.390 -0.263 -0.453 -0.453 -0.536 -0.536 -0.133 0.523 0.307 0.307 -0.210 -0.525 -0.157 -0.157 0.000 0.254 -0.138 -0.138 0.408 0.408 -0.313 -0.595 0.498 0.000 -1.293 3.657 -0.146 -0.146 0.000 0.000 0.155 -0.142 -0.216 -0.505 -0.120 0.561 -0.165 -0.128 -0.455 0.000 0.182 -0.390 -0.263 -0.453 -0.453 -0.536 -0.536 -0.133 0.523 0.307 0.307 -0.210 -0.525 -0.157 -0.157 0.000 0.254 -0.138 -0.138 0.408 0.408 -0.313 -0.595 0.498 0.000 -1.293 3.657 -0.146 -0.146 0.000 0.000 8.23700532 -0.60691334 4.48054950 10.59551401 11.48319645 7.02872937 10.70170750 8.17493567 9.38819406 2.09352637 10.83473144 13.17579516 4.37036658 -0.02195084 0.71501475 8.38460591 3.25106765 10.18628091 11.68799196 10.82693024 8.66920858 2.09352637 7.70369667 10.25261884 6.42650630 6.02244106 2.09352637 NA 10.17239300 4.29997725 6.69229188 8.06550930 6.60740282 10.60200119 9.76431613 2.85251827 8.29847091 -1.60691334 7.08308250 12.30081973 6.64101128 7.54790245 NA 4.45917585 8.48584138 6.34728119 3.25106765 -1.60691334 4.97804458 2.48054950 2.09352637 11.48402345 0.39308666 7.23857384 10.60892038 10.78540146 3.85251827 9.57795936 13.13959839 8.21006784 2.20044158 4.65987320 11.03761634 7.05842041 NA -0.60691334 3.03694284 13.7799166 6.5927560 9.1056110 12.3539005 9.5810546 10.6971501 11.9111224 11.7183895 8.5642608 10.4378197 12.5343929 9.9092766 8.9254399 9.4996470 -0.6069133 6.9008789 12.5287132 11.195398 12.280495 6.939979 12.997172 8.477893 5.275726 10.024716 8.296966 10.134833 5.696865 9.534553 10.902859 7.631488 6.568009 9.838616 4.563012 8.668638 11.454118 9.902859 10.710497 8.269847 10.150474 12.908229 4.659873 10.097563 7.626703 10.586609 9.171161 10.363909 9.331928 10.879416 10.474900 9.331928 NA 9.037121 6.810262 11.674579 5.358867 11.174649 8.776788 10.309710 10.063740 7.314925 13.570075 10.651356 10.296966 12.581673 9.781101 2.480549 2.480549 10.136235 9.590915 9.485180 TCGA-BH-A0H9 69 0 NA 1247 breast stage iia t2 n0 (i-) m0 female 2007 NA yes infiltrating ductal carcinoma 0 white NA 1 2 2 1 2 2 1 1 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.01673e-07 2.427581e-07 14.7058823529412 23.5294117647059 0 29.4117647058824 32.3529411764706 9.6202561 10.0163569 11.5027170 9.6065744 8.4508685 9.6137915 10.0460042 10.7569124 9.3412228 14.8438575 10.3899586 11.0231486 0.6451483 12.7076769 3.7744076 8.4232021 7.5934920 8.5154893 7.7219406 12.9003009 -0.3549440 13.7154134 4.4524768 9.6712746 10.4851158 6.1127293 NA 8.6854146 10.9426143 2.2300800 7.1409800 6.7948720 NA 2.8930515 9.8930523 10.8324768 10.1429766 10.3696386 10.3373043 11.2496780 3.2889786 11.5828663 14.8112290 8.2958355 9.6394782 11.4399467 11.7797115 4.3455667 5.1997155 9.1852528 11.4211464 NA 10.6380631 4.9849766 4.8150476 4.0374437 10.9874773 11.7593551 10.2930328 11.1409798 12.5235589 8.5876391 10.7145745 10.2482874 11.2013913 10.6563520 4.8739411 11.5095043 9.5201061 1.4524900 10.1529193 8.8484727 1.8166407 3.8150528 10.9546011 10.0004758 9.8212979 10.0390515 0.9670210 8.9771614 12.8952011 10.9927461 10.2468955 8.7352372 0.63353000 0.66201000 0.00263570 0.00263570 0.01712400 0.00819590 0.00402430 -0.35670000 -0.01409000 -0.01409000 3.65690000 3.65690000 -0.33583000 0.00000000 0.00000000 0.00000000 0.00097064 1.88040000 -0.04319500 0.02454800 -0.34171000 -0.00788630 -0.00788630 -0.01254100 -0.02630400 -0.02630400 -0.02630400 3.65690000 -0.35476000 -0.33837000 -0.11495000 0.00263570 0.01712400 0.02090300 0.00446020 0.01070300 0.00402430 0.00402430 -0.00415460 0.00680440 0.00680440 -0.01491600 -0.34205000 -0.34205000 -0.34205000 -0.34205000 -0.33583000 -0.33583000 0.00000000 0.00000000 0.00000000 0.00000000 0.00097064 -0.34527000 -0.34527000 -0.04319500 0.00342670 0.00342670 -0.34171000 0.34372000 -0.00788630 -0.00788630 -0.35305000 -0.02630400 -0.02630400 0.28675000 0.00110930 -0.35075000 -0.36850000 -0.336 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 -0.342 0.344 0.344 0.000 0.000 0.000 -0.332 0.000 0.000 0.340 0.678 0.310 0.310 0.000 -0.351 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.342 -0.342 0.000 0.000 -0.336 -0.336 0.000 0.000 0.000 0.000 0.000 0.000 -0.342 0.344 0.344 0.000 0.000 0.000 -0.332 0.000 0.000 0.340 0.678 0.310 0.310 0.000 -0.351 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.342 -0.342 0.000 0.000 8.5639879 -0.3549440 5.5876380 9.9511865 11.6530280 6.0997118 10.9494761 8.3380366 8.7588668 1.8150425 10.3623728 11.9895788 2.8930515 2.6451252 1.6451021 8.9107399 3.5031070 8.7705384 11.4649047 10.7833966 9.2168773 5.2149796 7.2263255 9.7731191 5.9760405 8.1004521 5.3316264 NA 10.8222328 5.4133097 7.1369778 8.2168773 9.5817627 10.1248747 10.2357117 4.4780140 8.3798345 -1.3547595 7.8398815 12.4224828 6.5459915 6.9305268 NA 6.7640661 8.2708335 4.6451252 3.5993178 -0.3549440 4.0026755 3.7342869 2.4524900 10.5669657 -1.3547595 9.1004518 10.4120677 9.7569125 3.8545742 9.7497235 11.6150508 7.7974093 1.6451021 2.2300800 10.5174149 0.6451483 0.6451483 1.6451021 1.6451021 12.4203235 6.7897827 8.3542084 12.7076769 9.7556080 11.0026767 12.9003009 12.3276805 9.3983414 10.6259784 13.0543168 10.8181772 9.1852528 9.6281183 0.6451483 7.0026766 12.8554917 10.8401893 12.7287703 7.8075159 13.2219043 9.1499437 5.1208579 8.3386116 8.8847234 10.3953502 5.3175501 8.7125590 10.3899586 5.1208579 1.9670579 10.2630513 7.6080204 8.4413104 9.9078069 9.5038828 10.5403213 9.2726587 9.4605081 11.8292252 4.2889786 10.9993631 10.1429766 9.9982715 10.3355593 11.1946688 9.5810264 11.1157836 10.2612140 10.1871892 5.3316264 9.6197186 5.7070084 11.4211464 3.8150528 10.6380631 6.0629765 10.0261268 10.9874773 7.1086489 13.5895165 10.1934650 10.5493830 12.6190911 10.9771613 1.8150425 0.6451483 10.6605398 9.9189203 9.0059717 TCGA-BH-A0HA 31 0 NA 1611 breast stage i t1c n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 1 1 4 2 1 1 1 4 1 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 2 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 5 0 6 0 0 0 0 0 0 0 0 4 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 4 5.375358e-06 1.872705e-06 31.4553990610329 7.04225352112676 0.469483568075117 24.4131455399061 36.6197183098592 9.9224772 9.3705797 11.4082488 7.3512414 8.4635628 9.1491979 10.0654872 10.4333908 10.0159314 14.4682649 10.6628869 10.8184767 2.6991740 12.7969150 2.3512326 10.3316410 6.5922492 8.3675436 10.1973019 12.8744472 1.2950765 14.1600231 4.5642379 9.6706593 10.4866013 8.8705207 1.4767964 12.9942132 10.6060556 0.4767446 8.2603165 7.3594157 NA 4.8225466 9.0172235 9.8151376 9.2744341 10.4050442 7.7956923 10.4430377 4.4767705 10.5892121 14.5733505 5.9512078 11.3773879 10.9736264 10.5455509 4.6731720 6.9086184 8.3756260 10.9491250 -0.1081142 11.2817103 5.6862260 6.1206298 4.5356673 10.5129462 11.5965783 10.6931143 12.1340911 12.3567387 8.8401774 11.1450667 10.1806763 11.0146381 10.7059920 3.3512467 11.6355927 9.7552221 1.4767964 10.5124881 8.6566816 3.6991629 5.6332772 10.3538011 9.7239090 9.9692934 9.5686487 3.0617416 9.3916560 12.2134564 11.6957394 8.2711885 10.1176201 0.0090312 0.0090312 -0.6713100 0.0111210 0.0075000 -0.1110500 0.0041632 -0.6712200 0.0069435 0.0069435 0.0069435 -0.1131200 -0.1131200 -0.1137800 -0.1043400 -0.1043400 0.0105640 0.0181030 0.0070826 0.0061090 -0.0128510 -0.6659600 0.0335490 0.0335490 -0.0024938 -0.0024938 -0.0024938 0.0000000 -0.0033243 0.0090312 -0.1073600 -0.6713100 0.0075000 0.0075000 -0.1025000 -0.7598600 0.0041632 -0.6712200 -0.6712200 0.0090312 0.0090312 0.0069435 -0.1400000 -0.1400000 -0.1400000 -0.1400000 -0.1131200 -0.1131200 -0.1137800 -0.1043400 -0.1098300 -0.1135200 0.0105640 0.0181030 0.0181030 0.0070826 0.0061090 0.0061090 -0.0128510 0.0076392 -0.6659600 0.0335490 -0.1081100 -0.0024938 -0.0024938 0.0000000 0.0029133 -0.6975000 -0.1082800 -0.113 -0.113 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 -0.102 -0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.697 -0.107 -0.107 -0.632 0.000 0.000 0.000 -0.102 -0.102 0.000 -0.586 0.000 0.000 0.000 0.000 -0.140 -0.140 -0.102 -0.102 -0.113 -0.113 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.666 0.000 -0.102 -0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.697 -0.107 -0.107 -0.632 0.000 0.000 0.000 -0.102 -0.102 0.000 -0.586 0.000 0.000 0.000 0.000 -0.140 -0.140 -0.102 -0.102 9.846007 NA 6.010751 11.221887 11.554701 8.701498 10.807689 9.351805 9.833591 3.936204 11.915564 11.226083 4.506519 4.101263 2.061742 7.679713 4.249362 11.334754 11.484968 10.444959 9.298015 1.476796 8.550022 10.466877 7.532055 5.578311 3.284129 NA 10.216553 4.822547 7.213738 7.886164 6.213738 9.840039 9.772159 3.798704 8.018515 NA 6.973959 11.868374 7.834324 8.975289 -1.108114 2.699174 8.215991 4.415373 5.521167 1.699152 6.840177 5.022328 4.284129 10.246059 1.476796 8.621431 10.522987 9.705591 6.177212 10.158597 13.209859 8.296952 3.936204 4.699163 10.690687 3.798704 -1.108114 1.891808 1.891808 13.0305819 6.1397376 8.6780797 12.7969150 10.6854135 10.3624690 12.8744472 12.0928619 8.6180283 10.2143016 12.6882554 9.8995382 8.3756260 9.1121885 0.4767446 7.1158115 10.8221779 11.2934896 12.3252652 5.1397396 13.1682959 9.0988246 6.8861636 9.3614519 7.5571458 10.1220648 7.3956361 9.6805285 10.6628869 8.1444757 5.1397396 10.6395835 6.3916560 6.5651539 11.0088038 10.3096627 11.1311103 7.6197307 10.2349958 9.4701828 6.2841273 11.2691589 9.2744341 11.4611911 10.0313614 10.5320551 9.5129462 10.8151376 10.4678220 8.2646753 0.4767446 9.6539347 7.0508739 10.9491250 6.3916560 11.2817103 7.8748037 11.1603521 10.5129462 7.2493619 14.1029379 11.2419205 10.2792890 12.1398859 10.8872240 4.6466984 NA 10.2980151 9.6051967 8.8532600 TCGA-BH-A0HB 55 0 NA 806 breast stage ia t1c n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white NA 1 1 1 1 NA NA 1 4 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 1.733986e-07 48.1481481481481 14.8148148148148 0 29.6296296296296 7.40740740740741 8.5796633 9.1231589 11.9078892 7.8635848 8.3216693 8.9102215 10.1513399 10.1299482 9.5468318 14.5164777 10.8717086 10.9091455 3.0232731 12.4969755 1.9357992 9.5633408 6.8900028 8.0804653 9.3756379 13.4911750 -0.5282403 13.8168253 2.1057451 9.2765250 11.3462583 9.3494349 2.1057451 10.4386387 11.2961054 0.5207491 8.5886521 7.5760519 3.5207742 3.4593660 9.0059279 10.1144718 9.8471989 10.1640243 8.9414315 10.7718573 -1.0643140 11.6757985 14.2062118 6.8537163 10.2605501 10.3813392 11.2212092 2.6362418 7.4236471 8.4256548 10.1831411 -1.0643140 10.8746514 9.9145174 5.8061719 4.5796629 9.4730254 12.1869934 10.4450871 11.4301625 12.6323399 9.0059279 11.4112870 10.4769035 10.9301604 10.8997867 3.6362418 11.4140710 12.0901504 3.8426973 10.0099484 9.4932706 2.5219804 5.1452617 10.3205907 9.2966540 10.1513399 10.1088593 1.9357992 9.3641671 11.5277967 11.1069837 9.8291084 9.7781573 0.02398700 -0.66809000 0.00249690 -0.01807800 -0.00097017 0.00666530 -0.01684100 -0.63906000 0.58973000 0.84731000 1.51030000 0.05039200 0.00313520 0.69746000 0.06036500 -0.65678000 -0.63083000 0.01950300 -0.64217000 0.04925600 -0.06168900 -0.65957000 -0.52940000 3.65690000 0.06847100 0.03327300 0.03327300 0.59332000 0.04103400 0.02398700 -0.00456950 0.00249690 0.02525000 0.01768400 0.00666530 0.01922300 -0.69133000 -0.64565000 0.65682000 -0.01766600 0.46314000 -0.47173000 -0.00857660 -0.00857660 -0.00857660 -0.02267800 0.00313520 0.50186000 -0.58215000 0.69708000 -0.65678000 -0.65678000 -0.63083000 0.01950300 0.01000600 -0.64217000 0.02707600 0.02707600 -0.11587000 -0.20622000 -0.65957000 -0.52940000 0.67085000 0.02174400 0.03327300 -0.65389000 0.02454800 -0.70199000 -0.63301000 0.000 0.000 0.000 -0.657 0.000 0.000 -0.642 0.000 0.000 0.000 0.000 -0.610 -0.610 0.000 0.609 0.000 0.000 0.000 0.000 0.593 0.593 0.000 -0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 -0.620 0.000 0.000 1.035 1.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.657 0.000 0.000 -0.642 0.000 0.000 0.000 0.000 -0.610 -0.610 0.000 0.609 0.000 0.000 0.000 0.000 0.593 0.593 0.000 -0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 -0.620 0.000 0.000 1.035 1.506 0.000 0.000 0.000 0.000 9.3291974 NA 5.8426973 10.4266578 11.0328515 6.8245502 10.9914283 8.3712064 9.1464783 2.2577348 12.2973395 12.1729900 1.7431702 3.1057284 2.3952274 7.3662593 4.0232731 10.4778715 11.3952386 10.5137078 9.4769035 3.4593660 8.5132357 9.5814654 6.7559865 10.7867751 4.2933558 NA 9.4923131 6.7302228 7.5615156 8.8694976 5.4749649 10.5411753 9.8524329 2.6362418 9.0586350 0.5207491 6.4034126 11.7615608 7.2711969 8.1979017 -1.0643140 5.7431622 8.7188051 1.5207491 4.1057284 -1.0643140 6.8841742 2.1057451 2.5207742 10.9609465 -1.0643140 7.2845354 9.9533114 10.1391549 5.9910887 9.4074821 13.0240983 8.8471989 4.6082297 4.8184518 11.9559188 1.5207491 -1.0643140 NA 1.2577348 13.588682 5.991089 8.451507 12.496976 9.541286 9.763943 13.491175 12.458388 8.421636 9.515123 12.540708 10.435155 8.425655 8.556027 2.395227 9.040406 11.165827 10.890730 12.125168 6.878322 13.560372 9.609116 7.576052 9.433659 7.115716 10.426943 6.913087 8.275657 10.871709 7.486553 3.183741 10.339884 5.622307 8.270170 9.713062 10.199076 10.727784 9.243008 9.467188 9.495184 6.154976 10.996601 9.847199 10.934397 10.104479 7.684000 9.556943 10.867283 10.385471 8.164625 3.395241 8.456465 6.799993 10.183141 6.239587 10.874651 5.755985 10.257171 9.473025 7.159809 13.824836 10.967853 9.935807 11.265603 10.973697 3.520774 NA 9.997178 9.485592 9.058635 TCGA-BH-A0HF 77 0 NA 727 breast stage ia t1c n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white NA 2 2 NA 1 NA NA 3 4 5 4 NA NA 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 1.827622e-05 1.005712e-05 8.70616686819831 23.3373639661427 0.362756952841596 62.5151148730351 5.07859733978235 9.4830424 9.4128334 11.8356598 9.1118162 8.6287200 9.0474206 10.5261245 10.2185647 10.8314165 14.2176505 10.8092922 10.7176204 2.9266447 12.4317601 1.8391937 10.2685930 4.8391887 8.3568556 9.7610272 12.6357329 0.8391534 13.2241723 6.1879142 9.8483990 10.2748565 7.2357912 NA 9.8643258 11.2022259 3.7460762 8.0607732 8.6815368 6.0091120 3.7460762 9.3754335 10.4428126 9.6823222 11.2769384 9.4080924 11.0707075 5.9266494 10.9349130 14.9835856 7.3085429 9.6625536 10.8285808 10.9545551 4.4830418 6.6205454 8.7948363 11.9439488 2.0090963 11.2096012 5.0290111 5.6593652 5.6971678 9.9946370 11.6742498 9.6987210 12.2562476 12.4801090 7.7787658 10.9914711 10.5346104 11.2306984 10.9675029 3.5940708 11.8586033 10.0619812 1.4241696 10.3573477 8.9838444 1.6486035 4.3627504 10.6193159 9.3430120 10.0320955 9.1452479 3.4241428 8.7743512 12.5777008 11.7533845 9.8566907 10.0541125 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.7948363 NA 6.1059734 10.5009643 11.4940460 7.7126302 11.1483784 9.5096212 9.1768082 2.6465313 12.1293492 11.5148809 3.2986143 3.8835817 0.4241696 7.6205461 4.1611137 11.1715026 11.7020173 10.0314791 9.3627482 6.9213352 8.4721815 10.4525153 7.0190958 11.8103706 5.9787379 NA 10.8746727 6.6657353 7.4902380 8.1012813 6.2055079 10.0649300 9.8760468 5.3149212 8.5551482 1.4241696 7.7520755 12.8869066 7.8221801 9.6625536 2.8391937 5.9477106 8.0728057 NA 4.3627504 NA 5.4538961 3.5396303 3.7460762 10.7988261 NA 9.0811694 10.4014287 10.0109886 5.4241495 10.2970801 12.1435376 9.7743514 3.8391836 3.5396303 12.6348201 3.4241428 NA 1.6465313 2.2986290 13.613253 5.179037 8.344998 12.431760 9.575588 10.554290 12.635733 12.051075 8.914666 10.499628 13.010910 10.233113 8.794836 8.891754 NA 7.766964 10.743445 11.292971 12.278108 6.963308 14.362473 9.284201 6.665735 8.590730 7.630349 10.127124 6.424149 7.891755 10.809292 7.889035 4.672075 10.645736 6.346982 7.396458 11.124588 9.793383 10.542225 7.536710 8.846213 11.825206 6.323003 10.613936 9.682322 10.278498 9.524811 11.070107 9.965891 10.626681 10.602399 8.969757 2.161114 8.599124 8.212051 11.943949 6.775824 11.209601 7.976177 10.557291 9.994637 6.916002 14.239198 10.634008 10.682322 12.368129 9.963954 4.265452 3.539630 10.022822 10.069207 8.990203 TCGA-BH-A0HI 78 0 NA 620 breast stage ia t1c n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white NA 1 1 2 1 NA NA 4 1 5 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.040392e-07 27.7777777777778 27.7777777777778 0 27.7777777777778 16.6666666666667 10.0415087 8.9444465 11.9141387 9.0921181 8.4608720 8.9900571 10.7240266 9.6052963 9.9547076 13.3962284 11.4462199 10.4540168 -1.5079930 12.8944180 3.0771746 10.0463145 6.8930843 7.8585275 9.6820298 13.5263595 0.4922121 13.8410372 6.7868263 9.9753611 10.6137389 7.3839893 -1.5079930 11.4120594 11.8039537 1.8141402 7.2963363 6.6419520 -0.5077879 5.0620613 9.7537127 10.1765156 10.8783373 10.9260515 10.0318488 11.0724639 -0.5077879 11.3911846 14.8490871 7.9253734 9.9142702 11.5809936 10.9278756 3.7776091 4.2470920 8.7077384 12.3995655 1.4922121 11.1301887 4.3990959 5.3123856 4.3748517 10.7451664 11.5372824 10.5183830 11.7804947 12.6822615 8.3610279 10.6661947 10.2797366 11.4516640 10.5945092 4.3501860 11.9751393 9.9699636 NA 10.2890561 8.8541490 1.6621143 4.8320545 10.7419114 9.9885599 9.7430958 9.4572682 2.1926361 10.4207238 13.0340280 12.1686032 10.0029695 9.5556005 0.75586000 0.76230000 0.10877000 0.10877000 -0.10697000 0.00166420 -0.00719580 -0.00719580 0.00180300 0.00180300 0.00180300 -0.00705760 -0.00705760 -0.00519250 -0.00519250 -0.00519250 0.00750000 0.00422820 0.00013863 0.11521000 0.09449100 -0.02288100 -0.02288100 -0.02288100 -0.01739100 -0.01739100 -0.01739100 0.11111000 -0.01243800 -0.01243800 -0.00526100 0.10877000 -0.10697000 -0.10697000 0.00166420 -0.78753000 -0.00719580 -0.00719580 -0.00719580 0.14043000 0.10745000 0.00180300 -0.00553750 -0.00553750 -0.00553750 -0.00553750 -0.00705760 -0.00705760 -0.00263220 -0.00519250 0.00124810 0.00124810 0.00750000 0.00422820 0.00422820 0.00013863 0.11521000 0.11466000 0.09449100 -0.66689000 -0.02288100 -0.02288100 -0.10972000 -0.01739100 -0.01739100 0.11111000 -0.01092200 -0.01119800 -0.02023500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.115 0.000 0.130 -0.537 0.000 0.000 -0.110 -0.110 0.000 0.000 0.756 0.756 0.111 0.111 0.000 0.000 0.000 0.000 0.109 0.109 -0.107 -0.107 0.000 0.000 0.000 0.000 -0.509 -0.649 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.115 0.000 0.130 -0.537 0.000 0.000 -0.110 -0.110 0.000 0.000 0.756 0.756 0.111 0.111 0.000 0.000 0.000 0.000 0.109 0.109 -0.107 -0.107 0.000 0.000 0.000 0.000 -0.509 -0.649 0.000 0.000 0.000 0.000 0.000 0.000 8.8552451 NA 5.5145736 10.8220017 11.3803778 6.9911737 11.7858207 9.0268584 9.2639177 NA 11.4065905 11.1700659 4.7210226 3.5796629 0.4922121 8.2554176 3.3991027 10.5885911 11.5917176 10.9524053 9.3027769 9.0265082 7.4751992 10.3691060 6.5849625 3.1926518 1.8141402 NA 10.9255300 6.0995351 6.2537567 7.8342802 5.9015958 9.9993856 10.2055919 5.4110703 7.9699638 NA 7.2669926 12.6066798 7.0235869 8.6955533 -1.5079930 5.0000000 8.6881926 NA 4.4922057 NA 4.0157652 5.5853862 2.0771746 10.1423596 -0.5077879 7.3059869 10.5009842 9.7589918 5.3250949 10.1843849 12.1598713 6.8930843 0.8140992 3.2995670 12.6740564 4.1646334 NA 1.0771746 1.4922121 13.480388 3.884520 8.689422 12.894418 10.278475 11.063010 13.526359 12.286621 9.355548 10.511101 13.317512 10.186128 8.707738 8.791413 -1.507993 7.555601 11.524251 10.9623558 12.3059866 7.2302972 13.9596176 9.0809201 4.8845247 8.8508566 8.2252378 10.2432012 6.7162076 8.6072489 11.4462199 6.4110686 3.2995670 10.8295485 4.1360601 5.9494229 10.3560045 9.9485598 11.1405629 8.1378636 8.8585275 12.4672472 3.1926518 10.5996317 10.8783373 10.6336740 10.0897923 10.8890777 10.0501477 9.7770294 10.5977866 9.2260680 NA 9.4893637 8.1984077 12.3995655 3.7016599 11.1301887 7.7089514 10.5214926 10.7451664 6.8759090 13.6737071 10.5259724 10.7882612 13.2230469 10.2821465 -0.5077879 -0.5077879 10.1633041 9.9382548 8.7971271 TCGA-BH-A0HK 81 0 NA 178 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma 2 white NA 2 2 3 2 2 2 6 4 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.115464e-06 9.01673e-07 18.1818181818182 55.6818181818182 2.27272727272727 19.3181818181818 4.54545454545455 9.8136122 9.6396696 11.9780836 9.1550049 8.0670417 9.0909352 10.1702575 9.8000339 10.8038657 13.0332569 12.1540044 10.4209253 1.3974744 13.0428363 3.0755155 8.5793457 4.8828729 8.2252672 9.6243418 13.0011672 NA 14.4789648 7.7514771 9.2360343 9.8820697 4.8828729 NA 8.7602685 8.7301559 1.3974744 7.4242478 7.8828747 4.3609191 5.7897658 9.2009334 10.7341778 8.9913994 10.4153701 9.9596905 11.0036682 2.2454348 11.9080145 14.5017848 7.2548321 9.4859714 11.2096254 11.1732230 4.8568811 -0.9243989 9.0062573 11.3884029 NA 11.2211338 4.8304075 4.7193751 3.7759566 10.7602686 12.6238603 10.3758725 11.5613493 12.6798416 6.9147236 11.0209638 10.6224338 11.1837177 11.1623197 4.3234493 12.0576223 12.4451174 NA 9.8756110 8.9052429 2.9881757 5.0527984 10.3912356 10.3417210 10.3528074 9.1801188 3.3234421 10.8178295 12.7420769 12.0504723 10.1368912 9.7381884 1.88930000 1.92860000 -0.00097017 -0.01798700 0.00027728 0.04350000 -0.01188700 -0.01188700 -0.77922000 -0.01133500 0.01042400 0.00819590 0.00819590 0.01084200 2.08150000 0.01321300 0.01614600 -0.00788630 -0.00659920 0.02567100 0.01894300 0.00374650 0.00374650 0.00374650 0.00624810 0.00624810 0.00624810 0.03059100 0.01148400 -0.01505400 -0.01326400 -0.00097017 0.00027728 0.00430210 0.00680440 0.00680440 -0.01188700 -0.01188700 -0.01298900 -0.00774820 0.01516800 -0.76903000 0.01098200 0.01098200 0.01098200 0.01098200 0.00819590 0.04174100 0.01084200 0.66919000 -0.76523000 -0.76523000 -0.01423300 -0.00788630 -0.00788630 -0.00659920 0.02567100 0.02567100 0.01391700 -0.74985000 -0.75685000 0.00374650 -0.01546600 0.00485790 0.00624810 0.03059100 0.00666530 0.03552400 0.03552400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.750 -0.757 0.000 0.000 0.000 0.000 0.000 1.889 1.889 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.758 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.750 -0.757 0.000 0.000 0.000 0.000 0.000 1.889 1.889 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.758 0.000 0.000 0.000 0.000 0.000 8.02680448 NA 5.85687865 9.99438328 11.54134147 8.12158014 11.39293264 10.50778523 8.99351870 NA 11.31243113 11.08318504 3.88287777 7.45489805 4.16298339 7.29952126 3.53494558 10.64964043 11.99791857 11.45760358 9.33996265 0.07546417 7.91157055 9.75587951 7.61079528 10.91708433 5.39744703 NA 11.35889780 6.93970614 6.81698746 7.23539104 4.74794589 9.71565644 10.79276801 4.28497305 8.25044576 0.07546417 8.24544480 13.88282461 7.26039551 8.88287502 1.66047231 4.46784027 9.24669690 5.53495180 5.09788886 1.66047231 3.93349710 4.88287288 2.39744703 11.03334756 NA 9.10894309 10.33937604 10.01436450 5.92101018 9.66610698 11.82413218 8.84204889 0.66047231 3.83040746 12.53559188 -0.92439892 NA 1.07553263 1.07553263 14.563390 4.908409 8.257914 13.042836 10.659543 11.434446 13.001167 12.441842 8.856880 10.433622 13.415787 12.285430 9.006257 5.675432 NA 7.318694 11.197701 10.7558795 11.8426699 4.6902271 13.7448447 8.5532783 9.7742247 8.2702766 7.9272689 10.1918640 5.9458839 6.1629834 12.1540044 7.4891479 2.5349580 10.8634226 7.0297168 6.2385156 10.5441441 10.4064369 10.9940106 8.2971070 7.8000340 10.4774662 5.9703383 11.8637979 8.9913994 10.7676996 10.6515319 10.6994015 10.2028696 9.9543372 10.8287368 8.8287366 NA 8.2057815 7.4967851 11.3884029 7.4721246 11.2211338 5.3234457 10.8817756 10.7602686 6.7966198 15.0739782 10.3240407 10.9319455 11.8482470 10.3145217 -0.9243989 0.6604723 10.2940832 10.2086622 9.5683746 TCGA-BH-A0HL 56 0 NA 72 breast stage iib t2 n1a m0 female 2009 NA no infiltrating ductal carcinoma 2 white NA NA NA NA NA 2 2 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.427581e-07 43.4782608695652 26.0869565217391 0 17.3913043478261 13.0434782608696 10.5006569 10.5491578 12.0146470 9.8090090 8.6083406 7.3803883 10.4624897 9.8709124 8.9347008 14.2741793 11.6615856 10.8782944 -0.7360041 13.0237768 3.5859720 9.4716691 7.1558281 8.0905931 7.0421223 12.9933467 5.1709345 13.7736341 4.6038933 9.6092004 10.6442351 5.5678253 -0.1510416 6.2413254 9.0097189 -0.7360041 7.0322287 8.5870994 -1.7360041 4.2640409 10.1216370 9.3233892 10.2562749 8.3959017 10.1060021 10.9761417 1.0714195 9.8732234 14.8734110 9.0927524 11.3436961 11.9628578 11.3733856 7.1436281 2.6563591 8.8490072 8.9355856 -1.7360041 10.6826879 2.8489984 -0.7360041 3.7234712 9.6044511 11.7556473 10.5066234 11.8912365 12.6088260 8.5678253 10.3826613 10.8480676 11.0927762 11.6776726 5.5586656 11.9313780 12.9776996 -0.1510416 10.1313234 8.9557882 6.6084293 2.5859720 9.9249320 10.4624897 10.5896312 9.0021368 7.1799240 4.1947805 10.9013487 9.7563985 10.3959016 9.9355857 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.3381859 4.3933270 4.2864154 11.1193025 10.7023167 7.1268676 10.6237942 8.6337618 8.7658221 NA 10.2601651 11.0968121 8.7678703 1.5859720 3.6215948 8.6531381 8.9195755 7.2036240 10.5349239 10.6622539 9.2940220 NA 8.1694315 8.1512652 4.5119740 4.0189279 2.0713851 NA 8.7069881 6.4588019 5.8639583 9.8970398 9.0945599 11.1950905 10.2047253 1.0714195 8.9618811 NA 8.3193271 12.3355908 8.3179706 7.9834337 NA 4.0454080 8.0874119 4.9505431 2.5859720 -0.7360041 -0.7360041 4.7234766 -0.7360041 10.7973744 NA 7.5471328 10.6944972 9.8810529 7.6542135 9.3009050 11.9264905 5.5119708 1.4339743 3.3933338 11.5575163 7.7478607 NA 5.9079001 4.4137904 15.552961 6.922256 8.536675 13.023777 10.403276 10.668122 12.993347 13.567076 11.776105 10.749371 12.067268 10.471974 8.849007 8.517892 3.018937 7.173938 12.321106 10.9993891 13.1073278 8.9808642 13.5103763 8.1079656 0.8490385 9.7316501 9.3640499 10.5494295 3.6215948 10.2058259 11.6615856 6.9293803 0.2639959 9.4370970 8.2124118 8.5510530 9.6050074 10.1126676 9.7028366 6.4389698 9.8667436 9.8138293 -0.1510416 11.5805101 10.2562749 9.3314791 10.4823052 12.0251803 9.1527878 10.1332529 10.5746574 8.2413244 -0.7360041 8.5825989 4.7069891 8.9355856 0.2639959 10.6826879 9.3627348 12.1998755 9.6044511 7.0685633 13.3008622 10.2156936 9.1940427 12.2396240 10.1157937 NA 4.7558970 10.3633924 9.2661564 9.9718351 TCGA-BH-A0HN 67 0 NA 516 breast stage ia t1c n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white NA NA NA NA 1 4 3 4 1 6 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.733986e-07 33.3333333333333 25 4.16666666666667 20.8333333333333 16.6666666666667 10.24368895 8.27764960 11.23228649 6.32686268 8.18605678 8.75558030 10.66671284 8.69382459 10.14921986 13.08109853 10.70613552 9.55896191 2.29124991 13.52563722 1.55429414 7.82417912 7.96931054 7.64879113 10.72336316 13.55585741 1.77665148 14.23056098 3.92351052 10.20950588 11.07390958 9.39347712 0.96930708 9.12159568 12.22787684 2.87619276 7.48894715 5.09859220 NA 1.77665148 9.80220081 8.82417912 9.60502886 9.89782912 9.25471308 10.99652567 13.74172847 10.90852270 13.89375219 6.01370567 10.17571471 10.44200160 10.22964235 4.90005046 -1.03061924 7.68698718 9.14548386 NA 10.24834092 1.29124991 4.29124254 3.42874540 9.86942281 11.82729181 10.16652754 10.73044645 12.16852302 9.46716269 10.51427526 10.32137627 10.17327050 10.33344543 4.25471497 12.60932972 11.54106345 NA 10.75925189 8.62573551 4.25508524 4.32686088 10.42823003 9.06338861 10.11141779 8.93220678 -0.03061924 8.57108176 12.36885577 11.69829415 10.65054917 9.29123886 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.00135640 1.77665148 7.64879113 11.11141786 11.26479279 9.28876851 12.76768134 5.95572197 10.17167959 -1.03061924 12.29180233 10.79217234 2.29124991 3.82729062 4.42874540 7.81793402 3.49287865 9.87093198 10.89263828 10.98890150 9.97493536 -1.03061924 8.56550045 10.51716928 3.92351052 NA NA NA 9.91840800 5.88817336 2.87619276 7.70740331 7.16406720 12.29633004 10.30693274 4.99168056 8.90742009 0.55424502 8.82573635 12.05079423 9.17143453 6.72419868 NA 0.55424502 8.29798556 -1.03061924 3.61316622 -1.03061924 -1.03061924 6.64173676 0.55424502 9.97843962 NA 4.36162801 9.89040793 9.37338786 2.29124991 11.18878187 11.71959905 7.48894715 3.05677426 0.55424502 11.12254616 1.55429414 -0.03061924 -0.03061924 -1.03061924 13.05633765 5.17876244 8.71246234 13.52563722 9.80615019 11.32052614 13.55585741 11.22787684 8.11231126 9.38293868 12.76788384 8.71918036 7.68698718 8.43079040 -0.03061924 7.23140553 10.15851767 11.27992358 12.82047421 6.08825186 13.92363981 8.23375340 2.66975247 9.03270588 7.03000715 10.39392850 6.99167829 7.64526790 10.70613552 6.71077751 3.87620259 11.05312247 10.03203153 7.18944704 7.22669829 10.62573569 11.04879561 7.78629446 9.33781722 7.68011756 2.42873200 12.12476153 9.60502886 11.00822978 10.48845556 10.91219177 8.85042471 9.15542493 10.70147819 6.66279795 NA 9.60942920 3.87620259 9.14548386 -0.03061924 10.24834092 2.87619276 11.51427521 9.86942281 6.04612650 13.75404787 9.85271785 10.03741723 11.63797420 10.41536024 NA NA 9.42155195 9.48599570 10.13672894 TCGA-BH-A0HO 48 0 NA 76 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma 1 white NA 1 1 3 NA NA NA 4 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 2.080784e-07 17.6470588235294 29.4117647058824 5.88235294117647 29.4117647058824 17.6470588235294 10.458073 9.775003 11.613552 9.678724 8.356547 9.617193 10.132442 9.375098 9.856482 12.083927 11.588863 10.264018 -0.822146 12.549931 4.387335 9.237902 7.314873 7.900689 10.338699 13.286161 1.762859 13.639617 4.620827 9.844501 10.521623 6.766596 NA 11.805121 11.130623 1.499833 7.946066 6.751529 NA 4.946066 9.478806 10.567513 11.297795 11.354834 9.873545 11.244139 1.499833 10.359966 14.605898 8.278912 9.869621 11.855271 11.414344 3.265347 7.689635 8.390986 11.476374 -0.822146 11.297958 2.878313 6.743936 5.189109 10.907502 11.564148 10.543111 12.066910 12.656715 8.540922 10.643958 10.612059 11.075727 11.036251 4.669735 11.804960 11.031776 -1.822146 10.297471 9.053631 1.502687 6.302003 10.564014 10.363067 10.581959 9.608857 2.499808 5.035861 12.832797 11.182804 9.555092 9.007605 0.62442000 0.63865000 -0.00401620 -0.00401620 -0.01326400 0.00694350 -0.00926030 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0.000 0.000 -0.674 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.623 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7180098 NA 4.5872750 10.3058760 11.6181021 7.1525262 11.0745925 8.5414908 8.8989810 0.7628165 11.1458284 12.0682106 1.4998331 3.6041425 0.7628165 8.1750610 4.6697355 11.9250257 11.5899222 10.6674788 9.5037492 -0.2371835 7.4975541 9.9390173 6.9159738 5.9657843 -1.8221460 NA 10.8991946 6.9493715 10.6561458 8.9066525 4.7628431 9.7255524 10.1971249 5.2653431 8.0651021 NA 7.1086185 13.0914257 7.2942256 7.6208254 -0.8221460 1.4998331 8.5893927 5.2653431 4.2222791 -1.8221460 4.3677065 5.8968603 1.6373320 10.5556345 NA 6.5529211 10.5121550 9.8414398 3.3873350 8.8352003 13.8358142 9.1905062 0.4997821 2.6373088 13.0748763 2.0847786 -1.8221460 4.2222791 -1.8221460 13.894917 4.604148 9.098235 12.549931 10.186923 11.240097 13.286161 13.411127 9.284739 10.511037 13.070709 11.302003 8.390986 9.714129 -1.822146 7.078749 10.576893 10.535434 12.187360 6.126248 14.485189 8.532131 4.685677 8.489630 8.456052 9.630360 7.355301 7.066625 11.588863 4.406700 6.839660 11.165856 7.307164 6.320398 9.793971 9.718010 10.997662 9.146534 9.002840 13.170997 4.243974 10.145173 11.297795 10.594679 9.986846 11.188934 9.198862 10.161588 10.628062 9.287712 -1.822146 9.955334 9.410674 11.476374 3.570196 11.297958 7.447009 10.311666 10.907502 7.163980 14.562479 10.871369 10.371099 12.793914 9.214742 1.637332 -0.822146 10.234858 10.625740 9.462127 TCGA-BH-A0HP 65 0 NA 414 breast stage iiia t3 n2a m0 female 2009 NA yes infiltrating lobular carcinoma 8 white NA 2 2 2 5 4 3 3 3 4 3 NA NA 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 5 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 5 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 5 0 0 0 0 0 6 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.583437e-06 2.080784e-06 8.92857142857143 79.9107142857143 1.78571428571429 7.14285714285714 2.23214285714286 9.96066750 9.91666652 11.77466407 9.61003043 7.67053941 9.46514006 10.45822542 9.89097694 10.29632330 10.22750247 11.35776999 10.38406848 1.53441028 12.59352185 3.45193640 9.51104635 8.12270119 8.42246934 11.16213928 13.15889362 0.68643329 13.85945831 7.05796466 8.97266796 10.57879685 7.02981396 NA 12.03424863 9.48471557 4.29521608 9.07614486 7.62657274 1.36446037 5.78232993 10.06924594 10.76828872 9.21153500 11.56996556 10.40818865 11.51120551 0.94942287 10.85708206 14.74683159 7.74707987 9.93100752 10.81414230 10.48341888 5.19736612 7.22556511 9.31357487 11.69930970 -1.63531552 10.55584548 5.75679647 5.73951601 3.91906353 10.73243847 12.13895599 10.70293557 12.29327368 12.43023046 8.05097831 10.87598336 10.90471966 11.70084486 11.18266046 4.93433250 12.19845493 12.26336252 -0.05050242 10.14501747 9.01552935 3.26558692 5.70432698 10.29003221 9.09918736 9.41840354 9.92481057 4.31867114 11.17263752 13.45773025 13.43870286 10.24406099 9.70377106 0.53590000 0.54506000 -0.00180140 -0.00180140 -0.00940460 0.51490000 -0.00152430 -0.00152430 0.00041593 0.00041593 0.00041593 0.01544700 0.52258000 0.02034300 0.02034300 0.02034300 0.00736090 0.00736090 -0.00470790 0.01153900 -0.42243000 -0.47382000 -0.47382000 -0.47382000 0.05637000 0.05637000 0.05637000 0.03951800 0.02749700 0.02749700 0.00000000 -0.00180140 -0.00940460 -0.00940460 -0.00055444 -0.00055444 -0.00152430 -0.00152430 -0.00152430 0.51821000 0.00110930 0.00041593 0.00473140 0.00473140 0.02345900 0.06815400 -0.51918000 0.01572700 0.02034300 0.02034300 -0.50846000 -0.50846000 0.00736090 0.00736090 0.00736090 -0.00470790 0.01153900 0.01342200 -0.42243000 -0.46802000 -0.47382000 -0.47382000 0.00833510 0.05637000 0.05637000 0.03951800 -0.00792060 0.06537000 0.06537000 0.000 0.000 0.000 -0.508 0.000 0.000 0.000 0.000 -0.422 -0.490 -0.490 -0.474 -0.474 0.000 0.000 0.000 0.000 0.000 0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.000 0.000 0.000 0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 0.000 0.000 0.000 0.000 -0.422 -0.490 -0.490 -0.474 -0.474 0.000 0.000 0.000 0.000 0.000 0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.000 0.000 0.000 0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.57149176 3.72202878 5.97918851 11.40459620 10.69651431 7.26579692 12.06946209 9.59269529 8.28973535 NA 11.74195946 11.10976132 1.94942287 5.09239774 2.94944155 8.11936552 4.24712242 10.62804038 11.36940045 10.26760649 9.26760649 0.94942287 7.29521516 10.66797318 6.81980483 5.49375940 -0.63553963 -0.63553963 11.10594477 6.90363605 6.91906711 8.48082170 7.18146139 10.12590018 10.58425131 6.42517393 8.32737390 NA 8.85131273 13.56904890 6.94944038 7.66368547 -1.63531552 5.15889441 8.34032592 5.83208239 5.05097613 NA 5.10594621 4.80193982 3.94944155 10.83843711 -1.63531552 9.71541689 10.46316784 9.90992488 5.74818211 10.21973556 12.99446042 9.00562623 3.00832553 3.61239968 9.90847624 1.53441028 NA 1.82391237 -0.05050242 12.519370 4.903636 8.919067 12.593522 10.475669 10.916186 13.158894 10.713759 9.419082 10.814400 13.038008 10.491505 9.313575 8.372906 -1.635316 6.926721 10.734620 11.4023678 11.9833221 7.3588314 14.1573402 9.3637732 6.4033973 9.2028940 7.5040292 10.2892012 7.3784986 7.1193655 11.3577700 6.4782195 0.6864333 10.8630777 4.9190683 6.0622793 11.0795818 10.2290508 10.6928722 7.6796272 8.0804397 12.3111099 5.4730011 10.9825283 9.2115350 10.6259850 9.8259571 11.0970692 10.3861518 10.6553606 10.6573745 8.5714921 -0.6355396 9.3687334 8.3672225 11.6993097 5.2099680 10.5558455 6.6452492 10.1808575 10.7324385 7.0889917 14.7012284 10.1886410 10.3000111 12.3100130 10.6394382 0.6864333 2.5344103 10.4359401 10.3704531 9.6440883 TCGA-BH-A0HQ 56 0 NA 1121 breast stage iia t2 n0 (i+) m0 female 2007 NA yes infiltrating ductal carcinoma 0 white NA 1 2 2 NA NA NA 3 4 6 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 2.427581e-07 25 20 5 35 15 9.7849649 9.7923031 12.0298302 9.4714726 8.1143774 8.8546181 10.8359207 9.4212382 10.4339618 13.2169839 10.5648390 10.4465740 4.5755120 13.7991945 2.9350448 9.7775890 7.7574840 7.9794481 9.4193436 13.0419631 1.8475961 13.9119549 5.3867489 10.0770107 11.1616077 5.4174475 NA 9.2988022 8.8630061 3.2399021 8.6741396 7.2905341 1.1695402 4.7544814 9.9190534 9.4887395 10.3070226 11.6909232 10.4833091 11.4447125 11.7100347 11.1988063 15.1101998 9.1739756 10.1283618 11.6219663 11.4219480 4.6804819 5.2738553 8.8947150 11.1564988 -1.1523237 10.4732999 4.2051422 5.1143795 4.4914491 10.5596881 11.7111966 10.7507197 12.3104767 12.4406319 8.8133753 10.6926890 10.4870222 10.9011776 11.1539376 5.1695202 11.6926890 11.7807284 -0.1524841 10.2837820 9.2452656 4.3102965 4.4623010 11.3889297 10.3054848 10.3779974 10.0509390 3.8475861 10.8021509 12.9932844 11.8875382 10.4174466 9.5686902 1.19240000 1.28560000 -0.04841500 -0.03602100 -0.01959500 0.17194000 0.34444000 0.35127000 0.59125000 0.59125000 0.59340000 0.03799200 -0.02815500 -0.00516990 0.04406000 -0.02091800 0.01852700 -0.04814500 0.48358000 -0.01870200 -0.05678400 0.32603000 0.32603000 0.32603000 0.29429000 0.37513000 0.32596000 0.37590000 -0.02172100 -0.00965280 -0.06014900 -0.04353900 -0.02350200 -0.05624500 0.17036000 0.14977000 0.34103000 0.40418000 0.39925000 0.29524000 0.33153000 0.64197000 -0.02276600 -0.01471500 -0.01471500 0.01565100 -0.05557100 0.00103470 0.01202200 0.03558800 -0.02419900 -0.01471500 -0.02336500 -0.00023899 0.00183100 0.43099000 -0.02186800 -0.02686400 -0.01034100 -0.45088000 0.32603000 0.32603000 -0.05462800 0.29079000 0.28635000 0.33714000 0.40652000 -0.40843000 -0.34873000 0.000 0.000 0.000 0.000 0.000 0.000 0.456 0.000 0.000 0.971 -0.395 0.326 0.326 0.000 0.000 0.326 0.326 0.000 1.337 0.336 0.336 0.368 -0.390 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.150 0.380 0.380 0.335 0.335 0.627 0.627 0.000 0.000 0.131 0.131 0.000 0.000 0.000 0.000 0.000 0.000 0.456 0.000 0.000 0.971 -0.395 0.326 0.326 0.000 0.000 0.326 0.326 0.000 1.337 0.336 0.336 0.368 -0.390 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.150 0.380 0.380 0.335 0.335 0.627 0.627 0.000 0.000 0.131 0.131 7.8419442 0.4325319 4.6024806 10.5279506 11.2585723 6.7063178 11.5839930 8.8405435 8.9123876 4.8017898 11.2900162 11.4197441 1.4325319 2.8475961 3.7055688 8.5907424 3.4914427 9.6581627 11.4819483 10.6277206 9.1329932 1.1695402 7.6024784 10.3469386 5.5200167 4.7783295 -0.1524841 NA 10.5226660 6.6613719 6.6804805 8.2073404 7.4914475 10.6013552 11.0178291 2.3070204 8.6549460 NA 7.7988755 12.2459339 7.7753693 7.3151967 -1.1523237 0.4325319 8.3314070 -0.1524841 3.9768768 2.6549396 2.6549396 5.5089420 3.2399021 10.7160278 -0.1524841 8.8699590 10.5362784 9.5471635 4.0955194 9.7783283 11.7941318 7.5164762 2.4325586 2.4325586 10.4696428 3.5480297 NA -0.1524841 0.8475961 12.7075547 4.9350542 8.4155470 13.7991945 10.1835396 11.1604740 13.0419631 12.5101481 9.0139800 10.5031217 12.9128388 9.8119319 8.8947150 11.4486653 -0.1524841 6.9136805 11.5369339 11.2709696 12.0214243 6.0570451 13.9029133 8.6757274 5.6024777 9.2569819 8.5652674 10.6021487 6.2484703 6.9456229 10.5648390 5.5618363 4.8699602 10.7578590 7.3314070 6.6746485 11.6577610 10.2654436 10.4963979 8.7363343 8.4824022 11.8749787 5.1329922 9.9872575 10.3070226 10.1416373 10.0435783 11.4405152 10.0758084 9.8341442 10.9995589 9.2128198 -1.1523237 9.8141758 6.2738553 11.1564988 5.3867489 10.4732999 7.4287915 10.2484704 10.5596881 7.2569823 13.8825619 9.8933507 10.2122729 13.0269559 11.0153228 NA 0.8475961 10.1757050 10.2733315 9.8191345 TCGA-BH-A0HU 52 0 NA 392 breast stage ia t1c n0 (i-) m0 female 2009 NA yes infiltrating ductal carcinoma 0 white NA 1 2 2 NA 2 2 4 2 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 1.733986e-07 25.9259259259259 11.1111111111111 0 29.6296296296296 33.3333333333333 10.26988746 9.45810820 10.94023239 7.05610768 8.96105431 9.21954173 9.94491290 9.59165848 9.65075325 13.21133526 10.77021483 10.32799560 0.01178186 12.80836206 2.88617943 9.90147153 4.55603696 8.24693057 10.31244793 12.89887116 3.88617943 13.31734831 6.23410656 9.88874249 11.32043227 3.98134123 2.33365271 9.85981522 10.96615270 1.23413340 7.86346276 6.84037889 NA 2.95031910 8.54309564 9.84618504 8.94737014 10.25964159 9.68531752 10.83826250 1.42674781 11.65120546 14.38743227 8.14000046 9.30556886 10.13583534 10.54309544 4.93454481 1.59669666 8.94737014 10.65827272 -1.57303755 10.49854907 4.18163531 4.73053127 4.40403114 7.56630297 12.11805884 10.96712176 11.07218480 12.36568784 8.78540277 10.22035487 9.56310187 10.93305908 10.44564715 3.23410273 11.79334693 10.19245200 2.12720404 10.23892882 9.88720736 4.59947848 3.78430505 10.93256305 9.21872838 10.35785832 10.26280192 3.55603696 6.73963481 11.90653179 11.01640265 10.22967167 10.79525800 0.765810 0.735500 -0.347900 0.817090 -0.213040 0.059228 0.077147 0.031864 -0.727290 0.775990 0.746330 0.184490 0.062484 0.075996 0.109650 -0.585290 -0.161310 0.000000 -0.733980 0.005743 -0.716040 -0.655930 0.104250 0.104250 -0.033264 -0.033264 -0.033264 0.130520 -0.693820 -0.733360 -0.325530 -0.347900 -0.591160 -0.315290 0.059228 0.059228 0.077147 0.030423 0.031864 -0.093662 0.042879 -1.029000 0.060799 0.060799 0.060799 0.173460 0.062484 0.084503 0.072114 0.109650 -0.736610 -0.731170 -0.012708 0.000000 0.000000 -0.733980 -0.051446 -0.037213 -0.716040 -0.701810 -0.655930 0.104250 -0.721190 -0.703340 -0.033264 0.090941 -0.712470 -0.694860 -0.694860 0.139 0.000 0.000 -0.731 0.000 0.000 -0.734 0.000 -0.716 0.126 -0.576 -0.656 -0.552 0.000 -0.721 0.000 0.000 -0.694 0.036 0.000 0.000 -0.712 -0.695 -0.326 -0.326 -0.219 0.129 -0.213 -0.213 0.000 0.000 0.000 0.000 0.000 0.000 0.049 0.776 0.000 0.000 0.117 -0.316 0.139 0.000 0.000 -0.731 0.000 0.000 -0.734 0.000 -0.716 0.126 -0.576 -0.656 -0.552 0.000 -0.721 0.000 0.000 -0.694 0.036 0.000 0.000 -0.712 -0.695 -0.326 -0.326 -0.219 0.129 -0.213 -0.213 0.000 0.000 0.000 0.000 0.000 0.000 0.049 0.776 0.000 0.000 0.117 -0.316 8.85196730 NA 6.94245117 11.37091453 11.45327496 6.53087916 11.03500634 7.25910391 8.60693407 0.01178186 10.73366761 11.89865406 3.42674781 3.91860568 0.74871883 7.87383473 3.18164326 9.68943371 12.29673084 10.88899813 10.16821856 4.04146203 9.15722161 10.36853276 5.61657531 6.11325250 0.01178186 -1.57303755 10.81288348 4.88618431 4.93454481 8.27850057 8.59792814 10.92127713 10.68590626 1.74867590 9.46155045 NA 6.65075307 12.10930727 8.30019558 7.30019604 -1.57303755 6.48203347 8.29711620 3.28473621 3.23410273 NA 4.38095104 2.82044450 1.42674781 11.41099197 NA 6.16146045 10.72481413 10.07240999 8.01920874 9.28861396 11.59212964 6.48744776 3.42674781 3.01171031 10.02433852 2.67468662 NA NA 3.18164326 10.045068 8.115002 8.709840 12.808362 9.682370 11.475579 12.898871 11.286286 8.415436 10.069255 12.978219 10.434830 8.947370 9.910567 3.380951 7.865543 11.154247 11.3663307 12.6416018 6.8902764 12.8815610 8.5650232 5.1271917 9.3456148 9.6288753 10.8986985 5.6165753 6.8147683 10.7702148 9.7350906 0.7487188 10.4211049 5.9736457 8.6995794 8.9794206 10.4636119 10.6639615 8.3029003 10.4327269 9.9889939 4.0117103 11.6010781 8.9473701 10.6967548 11.0581559 10.9731637 9.0506331 9.9605679 10.9954202 7.4518911 2.6746866 9.2557925 8.9681870 10.6582727 3.8530176 10.4985491 5.7213727 10.8273641 7.5663030 7.7005472 13.9866663 10.0173386 9.7604660 12.5776094 10.7960762 0.4267478 0.3220435 9.1724258 9.5489325 10.1812215 TCGA-BH-A0HW 62 0 NA 1561 breast stage ia t1c n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 asian NA 1 1 1 NA 2 2 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 6.589149e-07 3.121176e-07 31.0344827586207 3.44827586206897 3.44827586206897 31.0344827586207 31.0344827586207 10.6175491 10.0172445 11.1537335 8.9038315 9.8010359 8.8086946 10.8058273 9.3141686 9.5403034 13.9225642 11.9020426 10.5930890 0.5692966 14.0752455 5.0547617 9.7870501 6.5557456 8.6557364 7.8749408 13.7539311 0.2474415 15.1780285 NA 9.2023298 11.4249819 9.0881845 -0.1676365 8.9863432 9.0131071 3.1542916 5.2697738 6.9719206 5.4953338 4.3134926 10.0723654 9.4586865 8.9804218 11.1668287 9.2965744 11.3361948 1.9478531 11.7820742 14.4907666 7.1076554 9.7497412 10.7537142 12.2415832 4.4762261 NA 8.7037610 9.6011048 -0.1676365 10.2293306 10.1200815 2.5693453 4.1781410 9.9352197 11.9187265 10.1243072 11.2106640 12.5841921 7.8058270 10.9599336 10.9360940 10.6142752 11.0559686 5.3348686 12.4913987 13.5609628 -0.7526801 10.2142725 8.8712880 4.0557943 3.0547617 10.2673448 9.9867653 11.7514807 10.2880389 -0.1676365 4.2697738 11.3811910 9.0683833 10.4840188 9.3315507 -0.3964200 -0.3964200 0.0481200 0.0479780 0.0456400 0.0662290 0.0400440 -0.8821100 3.6569000 2.5476000 0.8500800 -0.3919600 -0.3933000 0.0358060 0.0358060 0.0358060 0.0192230 0.0192230 -0.0058140 -0.0015243 -0.0059522 2.2746000 1.4861000 1.5180000 -0.0396650 -0.0396650 -0.0550950 0.0127950 -0.3964200 -0.3964200 -0.3766200 0.0465590 0.0456400 0.0567980 0.0559020 0.0559020 0.0400440 -0.8798400 -0.8947300 0.0553730 0.0517380 -0.9071500 0.0146090 0.0146090 0.0146090 0.0146090 -0.3933000 -0.3933000 0.0528100 0.0358060 -0.8835600 -0.8940600 0.0192230 0.0192230 0.0192230 -0.0058140 -0.0015243 -0.0015243 0.0000000 -0.9128900 -0.9113800 1.4861000 0.0742650 -0.9304500 -0.0550950 0.0127950 -0.0220580 0.7545200 -0.0031859 -0.393 -0.393 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.896 -0.896 0.639 1.551 0.000 0.000 0.000 0.000 -0.396 -0.396 0.000 0.000 0.000 0.000 -0.374 -0.374 -0.878 -0.878 0.000 0.000 0.000 0.000 -0.882 -0.882 0.000 0.000 -0.904 0.000 0.000 0.000 -0.156 -0.156 -0.393 -0.393 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.896 -0.896 0.639 1.551 0.000 0.000 0.000 0.000 -0.396 -0.396 0.000 0.000 0.000 0.000 -0.374 -0.374 -0.878 -0.878 0.000 0.000 0.000 0.000 -0.882 -0.882 0.000 0.000 -0.904 0.000 0.000 0.000 -0.156 -0.156 8.6375755 NA 6.7109304 10.2652590 12.2745351 7.2041026 10.4154518 8.1157044 8.5911143 NA 11.3998499 10.7042102 3.9198358 2.5693453 4.0547617 7.6799487 2.8323635 7.8342466 11.7466297 10.0201335 9.9273264 NA 8.3335427 10.2935074 5.2246847 4.0802995 NA NA 9.3914275 7.9038312 5.2016025 8.4556408 6.1422235 11.4832563 10.0675856 -0.7526801 9.1602960 4.7865650 7.4641528 13.0591325 9.4185834 7.6757665 NA 8.7017060 8.0834570 NA 3.6736695 -0.1676365 -0.1676365 6.6637815 -1.7524370 10.4291800 NA 5.1542956 10.3424739 9.6142751 3.4953370 8.9461112 12.3388420 5.3026883 1.2473807 2.7709770 12.8142931 4.7231380 NA 2.4953370 1.4173260 15.199542 5.142226 8.712973 14.075245 10.256185 9.663148 13.753931 14.414942 9.156272 10.627056 11.683858 11.127755 8.703761 7.958213 1.417326 8.602758 12.741887 11.033063 12.003963 7.241760 12.956435 9.191386 1.247381 9.784139 9.687237 10.665670 3.639718 5.386959 11.902043 6.028766 3.201602 10.583634 7.788503 6.684618 9.295212 10.069579 10.692939 9.921542 10.152794 12.210483 1.247381 12.487755 8.980422 10.278763 10.386638 11.498149 8.739260 9.920716 10.679426 8.624617 NA 8.224916 4.739259 9.601105 -1.752437 10.229331 2.891264 10.553183 9.935220 7.080423 13.866509 9.560290 9.213912 12.621699 9.414197 NA 1.832363 10.128521 9.898458 10.024662 TCGA-BH-A0HX 54 0 NA 829 breast stage iib t2 n1a m0 female 2008 NA no infiltrating ductal carcinoma 2 white NA 1 1 1 2 2 2 1 4 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 1.179111e-06 3.81477e-07 6.66666666666667 24.4444444444444 2.22222222222222 51.1111111111111 15.5555555555556 9.5768664 10.2473557 11.6027427 9.1558142 9.8359339 8.2419150 10.2482604 9.9626178 9.9920839 13.9858251 11.5268512 10.6208458 1.6089038 12.7999018 3.1324781 9.2804609 6.3368404 8.5455576 9.1872924 13.0675826 -1.3910016 13.7062112 2.6089275 9.7764256 11.3754486 7.3537538 -1.3910016 8.7484710 9.9155511 0.9308509 8.3503867 7.6173484 3.5158134 4.4669011 9.3478563 10.5188128 9.6716405 9.9637200 8.8977859 10.8908497 NA 9.1265891 14.9836536 7.7618889 10.2639942 11.3929410 10.9325374 4.1938821 6.8710144 8.9319743 10.5240521 NA 10.8110436 11.3937590 5.6533152 4.1007759 10.0001633 11.6650493 10.2120824 11.5851258 12.2099940 8.2125460 10.5616609 10.2707512 10.5714543 10.9135562 4.6089216 11.7885178 11.5378081 -0.3910016 10.2786906 9.3300189 1.6089038 5.1324823 10.8830066 9.4885030 11.2507457 10.3355636 5.1324823 7.1519511 11.7407767 11.3608821 9.7968904 9.0714219 0.4967800 0.5274600 0.1160200 0.0461860 0.5471000 0.5066400 -0.0676520 -0.8731800 1.5592000 1.5285000 3.6569000 -0.0493060 -0.0409490 -0.4725200 3.6569000 -0.4529100 0.3950500 0.3454300 -0.4171200 2.0715000 -0.0869760 -0.0754050 -0.0625550 1.4076000 -0.4504400 0.0727630 0.0900750 0.8148400 -0.0494850 -0.0494850 -0.1220500 0.1107500 0.1236600 0.5756800 0.5066400 0.4070300 0.5129000 -0.4822300 -0.8807400 0.0052124 -0.0262280 -0.4905200 -0.0058761 -0.0058761 -0.0058761 -0.0086387 -0.0553670 -0.0221200 -0.4725200 -0.4725200 -0.4529100 -0.4529100 0.3950500 0.2221500 0.2221500 -0.4354400 -0.4658300 -0.4658300 -0.9033100 -0.3929100 -0.0754050 -0.0625550 -0.5235300 -0.4504400 0.0900750 0.9712200 -1.2929000 -0.4179900 -0.0937270 0.000 0.000 -0.473 -0.473 0.345 0.345 -0.435 2.106 -0.159 0.011 -0.393 0.000 0.000 -0.242 -0.411 -0.450 0.000 0.000 0.497 0.815 0.815 -0.462 -0.109 -0.388 -0.388 0.111 0.111 0.101 0.101 0.407 0.407 -0.452 -0.843 0.000 0.000 -0.491 0.675 0.000 0.000 0.000 0.000 0.000 0.000 -0.473 -0.473 0.345 0.345 -0.435 2.106 -0.159 0.011 -0.393 0.000 0.000 -0.242 -0.411 -0.450 0.000 0.000 0.497 0.815 0.815 -0.462 -0.109 -0.388 -0.388 0.111 0.111 0.101 0.101 0.407 0.407 -0.452 -0.843 0.000 0.000 -0.491 0.675 0.000 0.000 0.000 0.000 8.5689217 NA 6.2954200 9.9537704 12.0861720 6.9264229 10.5879876 9.3314370 8.7698246 -1.3910016 10.9939732 12.1925032 5.2088333 5.7174434 1.6089038 8.0663007 3.8183700 10.2648976 11.0330860 10.5539977 9.4457590 1.7788394 8.3902795 10.2111546 6.1938821 9.6810523 5.5037367 NA 10.2870796 8.7003551 6.9081272 8.6159470 6.3968222 10.4743553 9.9736015 3.9664674 8.9487696 -1.3910016 7.8943218 12.5655681 7.4637884 8.4915629 -1.3910016 6.7016766 8.5247991 5.8473255 5.8085910 NA 4.1324781 5.6137585 1.6089038 11.3843242 -0.3910016 9.8159340 10.0534170 10.1186947 6.1167141 9.1882357 11.7412588 8.3145520 3.8943230 3.1938821 11.9183961 2.5158134 NA 1.6089038 3.3093654 14.871874 5.527783 9.105773 12.799902 9.584768 10.642687 13.067583 13.075442 8.218929 10.810125 13.026574 12.226387 8.931974 9.342783 1.193898 8.206972 11.603450 10.8226315 11.4156707 6.9487702 13.5813144 8.8437371 5.8085910 9.0887000 8.5904871 10.1138131 6.1246197 8.5790255 11.5268512 8.0601306 0.1938348 10.0831326 7.0518636 7.2800711 11.4596926 9.8674857 10.2369094 8.4761986 9.2162499 11.3713017 4.5631154 11.3559462 9.6716405 9.9920839 9.6917341 11.0516041 9.7999790 10.6689400 10.6702909 9.0549692 -1.3910016 8.8610649 7.1551967 10.5240521 5.6201465 10.8110436 7.3162788 10.3861751 10.0001633 7.1863490 13.8868246 10.6046868 10.1514679 11.9183961 9.7336872 1.9308509 2.9308509 10.3015352 9.6257280 9.3419351 TCGA-BH-A0HY 60 0 NA 1545 breast stage i t1c n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 1 2 5 3 2 2 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.179111e-06 3.81477e-07 17.7777777777778 20 0 35.5555555555556 26.6666666666667 9.319606 9.311281 11.908713 8.935772 9.721928 8.963661 11.040965 9.639208 11.564297 13.963661 10.619451 10.716265 NA 17.175675 2.463282 9.331180 4.228819 7.562018 6.974246 13.195564 -1.443791 13.060902 7.028068 9.178775 11.600275 8.578761 0.141302 9.999119 9.622483 2.726308 7.056239 8.542235 -1.443791 4.311278 9.475257 10.243332 8.420580 10.666550 9.952998 11.087775 1.141367 10.617427 15.535584 8.466691 10.835423 11.365961 11.565172 3.643856 3.948713 9.089723 11.340824 NA 11.308774 5.214607 3.463282 3.643856 11.525420 11.700414 9.492295 12.095673 12.585335 7.539387 11.460463 10.940907 11.276424 10.980822 3.913943 12.398253 11.746990 NA 10.542235 9.193924 3.915005 4.200253 10.406580 9.962067 10.614723 9.677279 2.256830 10.625172 13.802689 11.599250 9.084847 10.023999 1.3815000 0.9728900 1.0253000 0.5353800 0.1193200 0.2678100 0.0539480 -0.5301200 1.9878000 1.7257000 0.1589400 0.3122500 -0.0096806 -0.5317500 3.6569000 3.6569000 -0.0327990 1.0111000 0.0319990 0.0161460 -0.5293000 -0.0120240 3.6569000 1.1468000 -0.2109400 -0.2109400 -0.2109400 0.4914700 -0.0440090 -0.5227600 0.0000000 -0.5484700 -0.0956050 -0.4942300 -0.5292000 -0.5292000 0.0070246 -0.5301200 -0.5454200 0.2123800 -0.0289850 -0.7816300 -0.5140600 -0.5091900 -0.0048461 0.8726900 -0.0096806 -1.1180000 -0.5317500 0.2926200 -0.5637600 -1.1073000 -0.0327990 -0.5527600 -0.5577600 1.0099000 0.0161460 -0.0084385 -0.5366200 -0.5734800 -1.1223000 -0.6119100 0.4679300 -0.2109400 -0.2109400 0.4914700 -0.4758200 0.4066100 0.4654000 0.312 0.000 -0.564 -0.564 0.000 0.000 0.000 0.000 -0.537 -0.533 -0.533 0.000 0.000 -0.068 0.468 -0.211 -0.211 0.000 0.000 0.491 0.491 -0.381 0.465 -0.138 0.000 0.574 1.067 -0.480 -0.480 0.901 0.000 0.000 0.000 0.212 0.000 -0.027 0.470 -0.509 0.000 0.000 0.558 0.312 0.000 -0.564 -0.564 0.000 0.000 0.000 0.000 -0.537 -0.533 -0.533 0.000 0.000 -0.068 0.468 -0.211 -0.211 0.000 0.000 0.491 0.491 -0.381 0.465 -0.138 0.000 0.574 1.067 -0.480 -0.480 0.901 0.000 0.000 0.000 0.212 0.000 -0.027 0.470 -0.509 0.000 0.000 0.558 7.1893887 7.1674181 5.0158231 10.6181021 12.5138582 5.2763999 11.9725311 8.0902098 8.3584411 -1.4437913 11.2060986 11.2594209 4.8231787 4.3112779 2.7263081 8.6291959 2.1413674 9.5171194 12.4101902 10.7624920 10.3389821 3.3637458 7.5759839 10.3303567 5.6116770 6.0158254 0.1413020 NA 10.1779874 5.9487106 5.8873108 7.6830978 4.9487130 10.3663543 10.9144951 2.9487130 8.8578896 NA 6.9826582 13.4187886 7.6623016 8.0799551 -1.4437913 NA 7.5336731 5.4989082 4.0799583 NA 2.4632824 3.8043221 0.8782937 10.5192894 -0.4435951 7.6805149 9.9384769 9.4760017 3.8043221 9.3645532 12.3531428 6.4812053 2.9487130 2.5564049 10.6937047 4.2568295 NA -0.4435951 1.8783330 13.644693 6.263752 8.699776 17.175675 10.345112 10.430606 13.195564 12.026671 11.735973 10.865870 13.608664 9.498175 9.089723 10.271068 -1.443791 7.451211 11.195282 12.0843590 13.2895146 4.4143724 13.9267719 8.9106427 6.9993371 8.5163954 8.3701747 11.4135385 5.9051222 5.7363018 10.6194513 8.2056496 2.4632824 11.5963405 7.1488507 7.2083417 12.5329575 10.6969036 10.9860616 6.0641887 8.9194330 10.3625401 3.5563926 11.0251625 8.4205797 10.0824035 10.6224825 10.7375456 10.1916580 10.5528669 11.2261642 8.6727372 3.5563926 9.4154545 6.5787606 11.3408237 3.2002532 11.3087740 7.1525830 10.9045682 11.5254200 6.9993371 14.2816797 10.0784844 9.7331898 12.4884235 11.2830373 0.8782937 1.1413674 9.6616472 10.1138570 10.3877006 TCGA-BH-A0RX 59 0 NA 170 breast stage iia t2 n0 (i-) m0 female 2010 NA yes infiltrating ductal carcinoma 0 white NA 3 3 4 3 5 3 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 3.81477e-07 1.040392e-07 50 21.4285714285714 0 28.5714285714286 0 9.16702091 8.68111435 10.87528069 7.90614381 9.90398651 8.73063962 8.43643713 10.78009008 11.67501324 13.46457953 10.27054856 10.34981364 NA 11.74235744 1.51954190 10.28829823 5.63504041 8.91616729 6.98444808 8.49302081 -0.49980982 11.44363271 8.05094404 9.72588496 10.00068920 4.88879682 1.25652763 10.51389238 11.15104274 4.18252546 8.37131142 7.72901567 -0.06537028 6.97899411 8.55665166 9.47181846 9.75955884 9.78712960 8.74034374 9.85569715 3.18253340 7.56395661 14.97143901 6.97587547 10.14952625 10.49827301 10.61891036 3.45815886 7.63503969 8.66081812 12.61110809 0.51954190 10.93952272 5.14405453 7.68614401 4.42645263 9.99191492 11.84599201 10.00068920 11.21942412 11.98138301 7.58923616 10.75756911 10.12627612 10.11885557 10.10013523 2.93459198 10.90182627 9.23266268 3.02206593 10.51956254 10.71595976 2.84149013 5.84149013 10.06001346 9.49014770 10.95488550 10.45128500 2.39402017 7.02735756 12.28457229 12.73205890 9.83017529 9.69198999 0.3687100 0.3687100 -0.1027600 0.0000000 -0.1102400 0.0808580 0.1081800 -0.0540810 -0.1213500 -0.1213500 0.5537200 0.3318900 0.0065417 0.0332670 0.0332670 0.0332670 0.0029133 0.0029133 -0.1088000 -0.1115500 -0.1148200 0.0413170 -0.0329960 -0.0329960 0.0091705 0.0091705 0.0150280 0.2047500 -0.0994100 -0.0065050 -0.0761450 -0.1027600 -0.2370300 -0.1102400 -0.0752570 -0.0752570 0.1081800 -0.0540810 -0.0540810 0.1149200 0.1149200 -0.1213500 0.3375500 0.3375500 0.0019418 0.0033299 0.0065417 0.0065417 0.0332670 0.0332670 0.0332670 0.0332670 0.0029133 0.0029133 -0.0126420 -0.1088000 -0.1115500 -0.1115500 -0.1274600 0.0359470 0.0413170 -0.0329960 -0.0012473 0.0091705 0.0150280 0.2047500 -0.0858550 -0.0019399 -0.1376400 0.281 0.000 0.000 0.000 0.000 0.000 -0.109 -0.112 -0.111 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.369 0.205 0.205 0.000 0.000 0.000 0.000 -0.103 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.115 0.115 0.467 0.588 0.336 0.000 0.000 0.000 0.281 0.000 0.000 0.000 0.000 0.000 -0.109 -0.112 -0.111 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.369 0.205 0.205 0.000 0.000 0.000 0.000 -0.103 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.115 0.115 0.467 0.588 0.336 0.000 0.000 0.000 8.34822799 2.51956706 7.66930958 11.06581395 11.62459800 5.91725033 10.19021878 10.05416364 8.77298454 3.68948927 12.03246755 11.75592757 1.93459198 1.74196308 2.25652763 9.10076298 5.25652763 11.68321220 11.28636745 10.84149060 10.07670712 -1.06552124 8.31397817 10.35876635 8.18726546 7.77065068 -1.06552124 3.63503461 10.70402466 4.36086288 6.03263206 8.51768277 7.54562479 9.73614669 10.27222188 3.02206593 9.09447124 4.68948927 7.49302041 12.65634008 6.97351944 8.91901853 -0.06537028 -0.06537028 7.98716792 1.25652763 4.66251885 NA 8.15134590 2.52556779 5.22000098 11.58699690 5.56395737 10.32315555 10.77812856 10.54792905 7.15860161 10.73671242 13.55905281 10.10702754 5.85346427 5.44239616 10.30474249 1.25652763 6.36922741 2.63503461 7.84748962 10.641959 8.456200 8.213049 11.742357 9.527057 11.322348 8.493021 9.912595 8.628087 10.165821 13.099978 11.674170 8.660818 8.578456 4.292149 7.233809 10.929307 10.99833212 11.53799454 4.57845572 13.30180931 8.53265242 7.48534712 9.18371353 8.38992727 9.97780509 8.15860161 7.65227639 10.27054856 8.22231239 -0.06537028 9.75637401 9.81111696 8.53321096 10.79568692 10.35403357 10.20372668 7.26102958 9.36505252 9.05094404 9.01408493 9.99825799 9.75955884 10.39198086 10.30037567 10.45521871 10.64712704 10.33920944 10.60569878 8.43842594 NA 9.19685929 8.28067057 12.61110809 9.24634823 10.93952272 6.40220542 10.99128516 9.99191492 7.28332824 14.23377226 10.36766373 10.91080610 12.48810933 11.02801758 6.71595925 1.25652763 9.71513971 9.01541756 8.86385856 TCGA-BH-A0W3 58 0 NA 728 breast stage iia t1c n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 1 1 1 1 NA NA 4 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 2.080784e-07 18.75 18.75 6.25 31.25 25 11.0283987 10.0953750 12.1024524 10.0524643 8.1527158 9.8072192 11.2105403 9.2976885 8.9664178 13.3036539 12.0356606 10.6270476 4.0982679 13.4758122 3.1347959 9.4081231 6.5876530 8.1460213 11.0341507 13.8299786 0.8128678 13.7737727 8.7332184 9.8610801 10.7095765 5.6072830 -1.1870500 9.2568453 11.9890389 1.3978030 7.6583557 4.7436011 NA 2.7197530 10.5111363 10.7735917 11.8538403 11.0968222 9.7324739 12.0185062 4.9626138 10.9530564 13.4627955 9.1295772 9.3722332 12.6050459 11.7283717 3.6202228 7.1302781 8.8599897 12.4229678 -1.1870500 11.7826120 4.7670615 4.9421485 5.1166475 10.5685879 11.8495545 10.2516576 11.8024376 13.1838255 8.0296113 10.4155645 10.0576636 11.7926481 11.2422724 4.7901465 11.6882311 6.0889896 NA 10.2386061 8.7743153 3.0623117 5.1347918 10.4526586 9.7436030 9.9016539 9.1660127 1.6202110 9.9965010 11.9411823 11.2124107 10.2137451 9.7937194 0.438510 0.438510 0.077430 0.075657 -0.363060 0.090720 -0.370760 -0.370760 -0.365950 -0.365950 -0.365220 0.071678 0.071678 0.025812 2.358100 2.951600 0.057161 0.057161 -0.352700 0.089561 0.061651 0.038347 0.031582 0.031582 0.000000 0.000000 -0.007472 0.063366 -0.395580 -0.365330 0.025531 0.075657 -0.363740 -0.363060 0.090720 0.103370 -0.370760 -0.370760 -0.370760 -0.088242 -0.088242 -0.365950 -0.359090 -0.359090 -0.359090 -0.372450 0.071678 0.071678 0.025812 -0.023957 -0.829280 -0.835270 0.057161 0.057161 0.057161 -0.364500 0.061543 0.072253 0.061651 -0.830740 0.038347 0.031582 -0.358520 0.000000 0.000000 0.063366 -0.352360 -0.852340 -0.858510 0.000 0.000 0.000 0.000 0.000 0.000 -0.353 0.000 0.000 0.800 -0.831 0.000 0.000 -0.359 -0.359 0.000 0.000 0.075 0.439 0.000 0.000 -0.367 -0.852 0.000 0.000 0.000 0.000 -0.363 -0.363 0.000 0.000 -0.371 -0.371 0.000 0.000 -0.366 -0.366 -0.359 -0.359 -0.142 -0.142 0.000 0.000 0.000 0.000 0.000 0.000 -0.353 0.000 0.000 0.800 -0.831 0.000 0.000 -0.359 -0.359 0.000 0.000 0.075 0.439 0.000 0.000 -0.367 -0.852 0.000 0.000 0.000 0.000 -0.363 -0.363 0.000 0.000 -0.371 -0.371 0.000 0.000 -0.366 -0.366 -0.359 -0.359 -0.142 -0.142 8.793005 -1.187050 7.247494 10.907603 11.552224 7.441347 11.921227 7.895015 9.207328 0.397803 10.814274 10.558263 3.670852 NA 4.743601 8.772868 4.060791 9.479977 11.545881 11.059903 8.800130 6.921390 7.610527 10.267165 4.900331 4.719758 0.397803 NA 10.835234 7.581050 4.205181 9.084329 4.170414 10.577095 10.758310 4.427573 9.329551 NA 6.884328 11.404856 9.820594 6.051270 NA 8.000218 8.174809 5.041685 2.620211 NA 2.513314 6.817424 2.719753 10.196030 NA 5.683230 10.006391 9.734707 2.982784 10.298695 12.750056 7.074960 2.620211 2.272292 14.591071 1.982802 NA 1.134812 NA 15.132030 6.247495 8.382721 13.475812 9.829674 10.939893 13.829979 12.956408 10.669610 10.992153 12.688423 8.695509 8.859990 8.270247 2.513314 7.134794 11.664810 10.910569 12.282762 8.262014 13.942227 8.620221 3.513301 9.416492 9.784409 10.577804 6.926608 3.670852 12.035661 7.070254 1.982802 11.520225 5.471077 8.006342 8.438574 9.884328 10.642985 7.658356 8.774315 12.901902 3.134796 12.345647 11.853840 10.216943 9.766335 11.669097 9.818490 10.742494 10.428035 8.380822 1.982802 8.844140 5.456721 12.422968 1.982802 11.782612 4.427573 10.576078 10.568588 7.460324 12.584252 10.015602 9.368413 13.138171 10.360724 NA -1.187050 11.107774 10.571089 9.249577 TCGA-BH-A0W4 46 0 NA 759 breast stage iia t2 n0 (i-) m0 female 2010 NA no infiltrating ductal carcinoma NA white not hispanic or latino 1 2 3 1 2 2 3 3 4 3 NA NA 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.387189e-07 24 24 4 12 36 10.4813273 10.1995564 12.3537678 9.8788064 8.1451088 8.8992705 10.8053224 9.5501153 10.0140778 13.6698763 11.9557238 10.8309118 4.1120912 13.0968812 3.1120996 9.8222622 6.6564134 8.6529751 9.7850426 13.3035641 4.5470302 14.4166139 5.7834698 9.1375653 10.9524635 4.8807688 -1.6429548 8.5920234 9.7570179 4.2398486 7.8490591 7.9737548 0.9421579 3.6426092 9.9801730 10.1237350 9.8997543 12.6302002 10.3077620 11.7427988 8.7092496 11.8293891 14.9819158 8.5260911 10.2314190 11.1912820 11.7310228 4.8649983 5.8084159 9.4618048 11.9080730 NA 11.4256484 6.8610323 4.0296296 5.1253907 10.4929153 11.8868806 10.3895962 12.9062687 13.1360019 8.1253902 11.0761669 10.6359139 11.5671163 11.4563894 5.5956111 12.1405112 13.2059757 -0.6427295 10.6339120 8.5629994 4.1648185 3.3114014 10.5531933 10.7818972 10.4430104 9.5890271 2.6791310 8.5872266 14.3614045 13.5071516 10.5002703 9.7724197 -0.00207840 0.00124810 -0.00221680 -0.00221680 -0.00788630 -0.00360110 -0.00290910 -0.00290910 0.00000000 0.00000000 -0.00110870 0.00346870 0.00346870 0.00305220 0.00305220 0.00305220 0.00097064 -0.00401620 -0.00318590 0.00110930 0.00847430 0.00917050 0.00917050 0.00917050 0.01405100 0.01405100 0.01405100 0.01824300 0.01572700 -0.00207840 -0.00154860 -0.00221680 0.01964300 -0.00788630 -0.00360110 -0.00360110 -0.00290910 -0.00290910 -0.00290910 0.00903120 0.00708430 0.00000000 0.00402430 0.00402430 0.00402430 0.00402430 0.00346870 0.00346870 0.00305220 0.00305220 0.00305220 0.00305220 0.00097064 0.00388540 0.00388540 -0.00470790 0.00110930 0.00110930 0.00847430 -0.53723000 -0.52235000 0.00917050 0.00291330 0.01405100 0.01405100 0.01824300 0.00041593 0.01670500 0.01670500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.24594910 NA 5.97925712 10.58932709 10.91299342 7.27365295 11.32407195 9.73735315 8.48798269 1.67915352 11.60572664 10.83236694 3.35720008 4.13856876 4.16456104 8.00286451 2.16456104 9.62223489 11.56254109 10.63129294 9.39749581 2.60513871 8.13528295 10.48197355 5.61459501 8.02431746 2.60513871 -1.64295479 10.42363164 7.23984862 7.25202388 8.28201856 6.36843312 10.56599513 9.99790291 3.00106360 8.62399266 -0.05784211 8.10203973 13.11428347 8.59441605 6.93085322 -0.64272952 -0.64272952 8.04020039 0.94215789 3.78346713 -0.64272952 2.67913100 6.39172992 1.52712039 10.12124819 1.67915352 9.27904686 10.22679991 9.65182684 4.05764955 9.27681417 11.90253253 7.24899016 1.52712039 3.67913100 11.54687618 2.35721416 -1.64295479 0.67915352 1.81664066 13.4638691 5.4232958 8.5170772 13.0968812 10.3490821 10.0554766 13.3035641 12.7148955 9.4137218 10.9758210 13.2307463 11.3887350 9.4618048 8.8817478 0.6791535 7.5195977 11.9200447 11.5872264 12.1048746 7.1677774 13.6767702 8.9146698 5.2398486 8.9929242 8.4993129 10.7730878 4.7147566 7.1548677 11.9557238 6.5271313 3.9421673 11.2478503 6.7876584 7.0174521 12.9447492 9.8674757 10.5745580 8.5233691 8.1964098 12.8015092 4.6051328 12.9049627 9.8997543 10.0393228 10.0493856 11.3519130 9.9810874 10.7387490 10.5700063 9.4922740 NA 9.3997135 7.1011994 11.9080730 5.2026959 11.4256484 7.1154297 10.7594187 10.4929153 6.8001492 14.1052154 10.0705926 10.3813068 13.2387980 11.3705287 0.6791535 NA 10.6009750 10.5706141 9.5239969 TCGA-BH-A0W5 77 0 NA 1288 breast stage iia t1c n1a m0 female 2008 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 3 3 3 2 3 4 4 5 NA NA 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 27.2727272727273 9.09090909090909 0 31.8181818181818 31.8181818181818 11.2101639 10.1402183 11.7787573 10.1060914 8.5872926 9.7554805 10.4090839 9.9588767 9.3523679 12.8859219 11.0729985 10.9709034 2.8658594 12.2652222 3.7589534 10.0992594 6.2284378 9.0377001 8.9391169 12.2951252 4.9813458 12.8008225 6.9288772 9.6679319 10.8971917 4.1739909 NA 12.0733414 10.6605933 0.7955176 8.5517013 7.3346371 1.0585243 5.2809044 10.2179640 10.2188047 9.9040031 11.8423298 10.0024930 11.5874554 4.6434753 11.5967020 14.4027396 8.9546032 9.6987580 11.7164269 11.0112543 4.6434753 0.7955176 9.3485319 11.8179852 -0.5263689 11.0156151 6.0808815 7.8998155 5.5503651 10.4742548 11.8786920 10.4042878 12.5244195 13.1432107 7.9206339 10.8961410 10.6791911 11.2004073 11.4450941 5.0734647 12.0163406 10.9141602 0.7955176 10.1683437 9.5623388 3.6880684 7.1877964 10.9016489 10.3778089 10.4016987 10.6609026 3.6434753 9.6079768 12.8635179 12.3874684 9.8343976 9.5308653 -0.00138580 -0.00138580 0.00083195 0.00083195 -0.00609040 0.17890000 -0.00041585 -0.00041585 0.64763000 0.64763000 0.65424000 0.00000000 0.00000000 -0.00380800 -0.00380800 -0.00380800 0.00235810 0.00235810 0.05965100 -0.00055444 0.01782400 0.01447000 0.01447000 0.01447000 0.02454800 0.02454800 0.02454800 0.29979000 0.00166420 -0.00138580 -0.00124730 0.00083195 -0.00609040 -0.00609040 0.17890000 0.17890000 -0.00041585 -0.00041585 -0.00041585 -0.00221680 -0.00221680 -0.33352000 0.00000000 0.00000000 0.00000000 0.02048300 0.00000000 0.00000000 -0.00380800 -0.00380800 -0.00235530 -0.00235530 0.00235810 0.00235810 0.00235810 0.05965100 -0.00055444 -0.00055444 0.01782400 -0.12252000 0.01447000 0.01447000 -0.00124730 0.02454800 0.02454800 0.29979000 0.00013863 -0.31541000 -0.31541000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.705 -0.123 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.300 0.300 0.000 -0.315 0.000 0.000 0.000 0.000 0.000 0.000 0.179 0.179 0.000 0.000 0.000 0.000 -0.334 0.314 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.705 -0.123 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.300 0.300 0.000 -0.315 0.000 0.000 0.000 0.000 0.000 0.000 0.179 0.179 0.000 0.000 0.000 0.000 -0.334 0.314 0.000 0.000 0.000 0.000 8.2581853 -0.5263689 5.3064409 10.2116428 11.1117602 7.3566219 10.7551908 9.8696415 8.5943716 2.0585243 11.4450941 11.0900626 3.3315333 2.9971117 4.6434753 8.4973050 4.3804386 10.2659341 11.0999440 10.2296898 9.1146991 3.7589534 7.7403373 10.1424355 9.6639926 6.3190398 1.0585243 NA 11.1122127 7.1101753 7.3653338 8.0242975 8.5596868 10.5099130 10.2545003 4.9492828 8.4013284 NA 8.4204567 12.6992099 9.1955041 7.2483375 NA 4.1174041 7.8594130 -1.5265767 3.6028369 1.6434868 8.2937296 5.4640507 5.4160662 10.1942223 NA 8.6670761 10.4522610 9.7208846 7.1495073 11.0160988 12.5497816 9.0300566 5.1174083 5.4508318 10.6453528 1.4735272 NA 1.2808969 2.5610084 13.141873 5.058511 8.755480 12.265222 10.764145 10.188654 12.295125 12.571829 9.299304 11.153690 12.647696 10.717617 9.348532 8.704772 2.997112 7.439335 11.365904 10.977376 11.837001 7.251627 13.065821 9.098346 9.177454 9.190370 8.309601 10.325491 9.076249 9.262269 11.072998 6.571583 3.758953 11.536777 4.663373 6.719389 11.319237 11.288934 10.300893 9.244214 8.340829 12.945988 9.545013 12.605596 9.904003 10.792940 9.601545 11.540817 10.290134 10.592167 10.614061 9.108362 -1.526577 9.635558 7.675674 11.817985 9.773903 11.015615 7.099259 10.988785 10.474255 7.878692 14.241683 10.158737 10.448682 12.729022 10.623615 8.399847 3.380439 10.633737 10.235517 10.118308 TCGA-BH-A0W7 49 0 NA 1363 breast stage i t1c n0 (i-) m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 1 NA NA NA 2 4 3 5 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 3.918809e-06 1.699307e-06 6.58682634730539 75.4491017964072 2.39520958083832 11.377245508982 4.19161676646707 9.8454267 9.6259309 11.3931858 8.5732136 8.9189118 9.6123632 10.0912841 9.8220416 10.2437761 13.0338471 11.0319375 10.4050383 7.4683316 12.0801014 0.3017047 10.2540063 7.4102750 8.4915749 10.1772437 12.5766138 2.4172179 13.2568554 6.4582557 9.6999312 10.5091715 8.8042508 1.8867062 10.3714239 10.9222757 1.7167715 8.6490028 6.8665346 -1.2831408 4.6940667 9.7584471 10.1314731 8.9250224 11.1841387 9.9298922 10.2713768 11.1488077 10.5357694 14.1817803 7.3508367 10.0313712 11.5994310 10.1540199 4.9835728 5.2713771 8.3785658 11.6515845 NA 11.3218043 7.3461449 7.0787315 5.2086421 9.8069003 11.9457568 10.7363786 12.4749070 12.7644231 7.7252163 10.8405860 10.0409684 10.9283720 10.7477998 4.0387171 11.0588626 10.1940403 0.3017047 10.3958281 9.2771207 4.9658535 5.9359571 10.9380729 9.5345710 10.3615454 9.6304253 4.3892157 9.3415833 13.4475234 12.2296518 9.7301106 9.9010434 0.0617940 0.0617940 -0.0123000 -0.0123000 -0.0041546 0.5142000 1.1409000 -0.5114600 0.5325700 0.5325700 0.5325700 0.0000000 0.0000000 0.0039252 0.0039252 0.0039252 0.0116790 0.0116790 -0.0310820 0.4524100 -0.1392300 -0.4633400 0.0390540 0.0457080 -0.0204120 -0.0204120 -0.0204120 1.4902000 0.0617940 0.0617940 -0.0124380 -0.0123000 -0.0041546 -0.0041546 0.5142000 0.5142000 -0.5498500 -0.5114600 0.0248290 0.5387200 -0.5302200 0.5273100 -0.0312230 -0.0312230 -0.0312230 -0.0312230 0.0000000 0.0000000 0.0094491 0.0039252 0.0039252 0.0039252 0.0116790 0.0116790 0.0116790 -0.5171200 0.4524100 0.4524100 -0.1392300 -0.5378100 -0.5195900 -0.4644000 -0.0230180 -0.0204120 -0.0204120 0.4980500 -0.0142280 -0.5195900 -0.5113500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 -0.139 0.064 -0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.498 0.498 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.514 0.514 0.000 0.000 0.026 -0.512 0.533 0.533 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.452 -0.139 0.064 -0.501 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.498 0.498 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.514 0.514 0.000 0.000 0.026 -0.512 0.533 0.533 0.000 0.000 0.000 0.000 8.4102750 -1.2831408 6.1514164 10.5189003 11.0721390 7.5574086 10.7784966 9.0541311 8.9812773 3.7167824 11.8454267 11.5567081 4.5241452 2.3017632 2.1762270 9.6138771 4.6475275 11.5739913 11.3347145 10.2704172 9.1772439 5.9456077 8.0521784 9.7328997 8.1367482 5.8460720 2.1762270 NA 10.7956058 7.2979883 8.3148406 7.8639929 6.5747691 10.0715167 9.6467860 4.3314974 8.7446939 NA 7.7639121 12.2224754 7.0566377 7.2206134 -0.2831408 1.3017632 8.0319377 2.1762270 3.7611789 NA 7.8069001 4.6006504 4.8665371 10.6508473 -0.2831408 7.7446939 11.0437791 9.9146189 6.6651554 10.4741779 13.9215501 9.2186250 5.9741759 5.4032882 10.4054753 3.1091098 -1.2831408 -1.2831408 2.9647128 13.666197 6.536967 8.174169 12.080101 9.921970 10.691202 12.576614 11.231995 9.235706 10.351145 13.060668 9.925022 8.378566 9.360644 3.574768 7.574769 11.194799 11.187701 12.738202 6.431033 13.390314 8.999876 7.716788 9.078732 7.708310 10.199848 7.899182 8.528965 11.031937 7.533771 3.240345 10.449379 4.983573 7.658833 10.237407 10.382124 11.122727 8.804251 9.430174 11.045182 7.916461 11.859214 8.925022 10.897629 9.901663 10.574769 9.513639 10.531370 10.387002 8.574769 -1.283141 9.315892 8.104116 11.651584 8.355224 11.321804 7.711141 10.505506 9.806900 7.104805 14.230546 10.673164 10.456568 12.036178 10.884520 6.524142 1.524164 10.165937 10.361095 9.313909 TCGA-BH-A0WA 82 0 NA 701 breast stage i t1c n0 (i-) m0 female 2008 NA no NA 0 white not hispanic or latino 3 3 4 4 NA NA 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.219503e-06 4.855162e-07 7.40740740740741 27.1604938271605 0 33.3333333333333 32.0987654320988 10.47581367 9.60659102 11.79808827 10.50531347 8.79225573 8.19049782 9.40077294 10.40150301 11.27018896 12.96601005 9.63355799 10.37238637 1.62232129 11.85887657 2.25975456 10.44144540 4.87867140 8.92611153 10.42574441 5.31038739 -0.54750999 7.34418937 8.82635845 8.97789723 11.29338037 7.90978690 1.45238458 9.56957482 10.35854484 0.03731193 8.74242464 9.23130424 -1.54750999 4.28529864 8.74011804 12.64931526 9.28133568 10.09806420 9.47477368 11.55438150 -0.54750999 6.24682229 15.57455637 7.14240425 9.47962063 10.96736634 11.08107920 3.91183536 NA 9.83178416 10.64716266 NA 9.53588518 6.87025867 6.18711449 6.13188576 8.86814749 11.82282079 9.36379769 11.70181560 12.59682506 7.87025805 10.92763257 10.78386021 11.72518137 11.49987060 5.12483266 12.67437048 10.01082654 6.45803087 9.84579628 9.91234972 2.99837605 4.42968291 11.50633168 9.81654051 10.63013678 10.46572852 7.79225606 8.49679986 13.04310981 11.69632356 10.72182471 9.85967361 0.0055529 -0.2774400 -0.3151700 0.8034400 -0.4037200 1.1402000 0.7958800 0.0019418 0.8467200 0.8467200 2.3518000 0.1554700 -0.3437700 0.0437230 0.0437230 -0.4067200 -0.3794300 0.0396190 -0.3969700 -0.4036200 0.2392300 -0.3487000 -0.3487000 0.1969500 -0.2186100 -0.2186100 -0.2186100 0.0000000 0.0059700 0.0055529 -0.4060600 -0.0234290 -0.0748110 -0.4037200 -0.3593100 -0.4163000 0.7958800 0.0019418 -0.4581100 0.1429500 -0.0534380 -1.2929000 0.0853650 0.0853650 0.0853650 -0.2198500 -0.3437700 -0.2668500 0.0437230 0.0437230 -0.4067200 -0.4067200 -0.3794300 0.0396190 -0.0077482 -0.3969700 -0.3825700 -0.3750400 -0.7532300 0.0335490 -0.3487000 -0.3487000 -0.4005200 -0.6471500 -0.2186100 1.0340000 0.0472680 0.3662500 -0.1027600 -0.188 -0.344 0.000 -0.407 0.634 0.634 -0.397 -0.375 0.239 0.770 0.000 -0.349 0.000 0.490 0.490 -0.219 -0.219 0.000 0.000 0.197 0.000 0.000 -0.103 0.000 0.000 0.000 0.000 -0.404 -0.404 -0.114 -0.359 0.730 0.000 0.000 0.000 0.024 1.230 0.000 0.000 -0.137 0.631 -0.188 -0.344 0.000 -0.407 0.634 0.634 -0.397 -0.375 0.239 0.770 0.000 -0.349 0.000 0.490 0.490 -0.219 -0.219 0.000 0.000 0.197 0.000 0.000 -0.103 0.000 0.000 0.000 0.000 -0.404 -0.404 -0.114 -0.359 0.730 0.000 0.000 0.000 0.024 1.230 0.000 0.000 -0.137 0.631 8.483073 2.975960 7.897421 10.281336 11.293774 5.565731 10.645007 10.786573 8.140201 NA 11.566473 11.442841 3.207299 NA 4.310384 9.665510 2.844727 10.420352 11.810233 10.304545 9.070791 1.911845 8.296327 10.223895 6.180327 7.159765 1.452385 3.944259 11.351763 3.737806 7.884948 8.223896 8.911837 10.501042 10.410958 2.911845 9.400773 6.059736 8.353273 12.502169 8.114184 11.955610 NA 3.809960 7.772078 6.014648 3.581689 -0.547510 5.124833 3.810309 4.560929 11.446759 5.878671 10.594194 10.933196 10.133644 4.756185 8.460834 13.247685 7.807757 4.452404 2.844727 10.693197 2.975960 8.663077 -0.547510 7.796702 12.901812 7.227193 7.840423 11.858877 9.250878 10.178198 5.310387 11.842172 8.753902 10.708025 12.652538 10.958961 9.831784 7.288456 3.359296 8.553068 10.664902 10.6609450 11.6694547 6.0671159 14.6857624 8.9005221 8.0260531 9.3905151 6.9442588 9.9306092 5.6520792 4.6812244 9.6335580 10.5408629 0.7743338 10.3308399 8.1248311 9.2583915 13.9406225 10.1463284 10.5507670 7.7168483 8.7285301 9.4657284 5.6812244 10.5120510 9.2813357 9.8823355 10.2916095 11.4196321 11.4756404 11.6671803 10.7115606 9.5332234 NA 9.1246277 8.0090649 10.6471627 4.0962619 9.5358852 7.0890309 10.0555685 8.8681475 7.6739931 13.5820108 10.5826546 10.5771733 12.7701011 10.4761602 3.7378057 NA 10.6031051 10.1270394 9.4740799 TCGA-BH-A18F 50 0 NA 1001 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 2 NA 6 2 6 4 4 6 4 3 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.075072e-06 4.855162e-07 26.0869565217391 34.7826086956522 0 30.4347826086957 8.69565217391304 10.0234776 10.2638581 11.8893688 9.9050972 7.4955585 9.3965829 10.0867802 9.8515799 10.1489178 9.6724365 10.9224068 10.5464010 -0.3499708 11.6843517 3.6500637 9.4734359 6.7481002 10.5625838 8.9203639 12.5074665 3.5569566 13.4285565 5.7896197 8.8836883 10.6934377 9.2265531 4.0423817 11.8190541 9.7388568 3.1736232 8.5984359 7.1499147 -0.3499708 5.0076216 9.9837830 10.5681864 9.2406556 11.8234334 9.5365274 11.2277335 3.0423817 9.6841798 14.9438815 9.3292057 10.2569365 10.9725602 9.8956213 4.3505114 3.0423817 9.0981850 11.8279553 NA 10.9717149 6.3295488 5.9261940 4.8979955 10.7467838 11.7280526 10.4355211 12.2456758 12.7577761 8.2957272 10.8944325 10.3730341 11.3896383 10.8863819 5.1094985 11.4650516 11.8151326 NA 11.1386620 9.2666174 3.7814122 5.7268830 10.8923496 10.3995191 9.4947744 9.6337748 2.7375353 9.9832239 13.0205517 12.8866061 10.2702884 9.5726531 0.7495600 0.7418100 -0.2322200 -0.2329400 -0.2316900 0.0206230 0.0267950 -0.5027700 -0.5102200 -0.5102200 0.0048579 0.0235660 0.0280600 0.0181030 0.0181030 0.0181030 0.0165650 0.0165650 0.0087528 -0.2300600 -0.4871200 -0.4788100 -0.4788100 -0.4788100 -0.1863500 -0.2141700 -0.2041100 0.0263730 -0.2226200 -0.2226200 0.0000000 -0.2160800 -0.2202300 -0.2371600 0.0206230 0.0206230 0.0267950 -0.5027700 -0.5136200 -0.1570700 -0.1570700 -0.5102200 0.5103700 0.5103700 0.5003000 0.5297600 0.0280600 0.0256710 0.0181030 0.0181030 0.0066865 0.0066865 0.0165650 0.0165650 0.0165650 0.0123760 -0.2300600 -0.2300600 -0.5083500 -0.4879600 -0.4788100 -0.4788100 -0.2321400 -0.1863500 -0.2041100 0.0263730 0.0308260 -0.4740600 -0.4740600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.230 -0.487 0.539 -0.488 -0.479 -0.479 -0.232 -0.232 -0.214 -0.214 -0.223 0.519 0.000 0.000 0.000 -0.474 0.000 0.000 -0.230 -0.230 -0.232 -0.232 0.000 0.000 0.000 -0.503 -0.157 -0.157 -0.510 0.000 0.508 0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.230 -0.487 0.539 -0.488 -0.479 -0.479 -0.232 -0.232 -0.214 -0.214 -0.223 0.519 0.000 0.000 0.000 -0.474 0.000 0.000 -0.230 -0.230 -0.232 -0.232 0.000 0.000 0.000 -0.503 -0.157 -0.157 -0.510 0.000 0.508 0.508 0.000 0.000 7.7844948 7.4412311 5.9261940 10.8839878 10.6807358 6.2960866 11.5426114 9.9580663 8.2968974 4.5327097 11.0823495 11.0632761 2.6500752 6.5629583 2.9719941 7.8643880 3.1094943 10.3409396 11.5179265 11.0663383 9.7121148 5.1578643 7.9191953 9.6401726 7.3224942 9.8583029 -0.3499708 NA 11.0541457 6.8643880 7.4314282 8.8023535 6.9987969 9.9874843 10.3894273 4.1736312 8.9899187 NA 7.9787436 12.1903178 7.8546397 7.3189540 NA 1.6500752 7.9191953 -0.3499708 4.5080483 -0.3499708 6.1419212 3.8595224 3.6500637 10.9862962 -1.3499708 8.9285181 10.3474707 10.0261941 5.4955577 10.1701962 12.3618431 8.2957272 2.7375353 4.1095026 10.1369036 0.9720309 NA 0.2349917 2.3504972 12.050118 6.050948 8.268454 11.684352 10.442298 10.982665 12.507467 11.117419 9.133884 10.861653 13.449198 10.799498 9.098185 8.133885 3.650064 6.501818 10.971433 12.0397000 12.2773745 7.4509687 13.9397623 8.9686115 6.9261928 9.2776024 8.9640852 11.4578220 6.9168552 7.2387830 10.9224068 6.2274966 2.9719941 10.8454408 6.6724367 7.4514856 11.8832389 10.3229359 10.2988756 7.3643142 8.6086215 12.3934304 6.6724367 11.2776709 9.2406556 10.3638847 9.6556931 10.6731299 10.2555482 10.7621823 11.3211674 9.7657626 9.5002555 9.7857395 7.4409057 11.8279553 7.2830643 10.9717149 7.4082915 11.1376575 10.7467838 7.5984359 13.6015810 10.0434591 10.7777406 12.4399079 10.8149756 5.8299789 -0.3499708 10.3741561 10.2925716 10.0370089 TCGA-BH-A18G 81 0 NA 149 breast stage ia t1c n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 3 NA 6 1 5 5 2 7 NA NA 0 4 0 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 5 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 5 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 6 0 2.809058e-05 1.036924e-05 24.6672582076309 3.46051464063886 1.24223602484472 34.4276841171251 36.2023070097604 9.6038581 8.7034710 10.7339686 6.8993569 9.8898842 9.2318212 8.8822609 10.6342438 12.5148373 12.6435744 9.9925843 10.0967152 0.9068906 10.9003008 0.9068906 11.3102577 6.3987437 11.0705403 5.7976615 8.3359486 NA 12.2702953 1.3219281 9.9693865 9.9329529 5.8454901 0.3219281 11.7182653 10.3758540 1.9068906 8.0834793 7.0967152 NA NA 8.1163440 9.6302671 9.3581017 10.4849487 8.9943534 9.8523344 NA 6.6706562 14.6457921 6.4656676 9.1548181 10.6136744 9.8542840 0.3219281 NA 8.8376279 10.6494807 NA 11.1899789 2.6438562 6.5117527 3.6438562 9.9384769 12.1284777 10.0154151 10.9743250 12.2554343 7.7936033 11.0963034 10.1783536 10.0574841 10.3954002 2.9068906 11.2902349 8.9199806 NA 10.3880173 8.8879821 2.4918531 3.6438562 11.7169266 9.3401283 10.7966480 8.8955753 NA 5.0498485 12.2686516 12.7985477 9.1845655 9.9421479 1.61100000 1.61100000 0.00555290 0.00305220 0.00388540 0.00319100 -0.00387790 -0.00387790 -0.00041585 -0.00041585 -0.00041585 -0.00658370 0.00430210 -0.00055444 -0.00055444 -0.00055444 -0.00650500 -0.00650500 0.00638710 -0.00013862 -0.00152430 -0.01422800 -0.65155000 1.60900000 -0.03299600 -0.03299600 -0.03299600 -0.00885260 -0.00470790 -0.00470790 0.00208050 -0.67002000 0.00388540 0.00388540 0.00319100 0.00319100 -0.00387790 -0.00387790 -0.00387790 0.00000000 0.00000000 -0.00041585 -0.00055444 -0.00055444 -0.00055444 -0.00055444 0.00430210 0.00430210 -0.00055444 -0.00055444 -0.00055444 -0.00055444 -0.00650500 -0.00650500 -0.00650500 0.00638710 -0.00013862 -0.00013862 0.00374650 0.03848900 -0.01422800 -0.65155000 0.00666530 -0.03299600 -0.03299600 -0.00885260 -0.00304750 -0.00166290 -0.00166290 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 -0.652 0.000 0.000 0.000 0.000 0.000 1.611 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 -0.652 0.000 0.000 0.000 0.000 0.000 1.611 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3581017 2.1292830 5.3442959 11.5790212 13.3266753 7.1947569 11.0946550 5.3888783 8.6492335 NA 12.7763559 11.6745536 7.5603328 NA 2.7813597 8.8017084 8.6370777 9.9012440 11.7384618 11.3741565 9.2121924 NA 8.4093909 10.5951409 4.5698556 10.3049217 NA NA 12.5974707 NA 4.9366379 8.1516508 9.0344551 8.6370777 10.6750749 2.6438562 8.4640352 NA 7.5507468 12.8534314 7.0361736 6.9366379 2.4918531 NA 9.3148664 NA 2.9068906 NA 3.7813597 -0.6780719 2.4918531 11.4830600 3.6438562 7.3162815 10.8346686 9.9657843 4.0223678 9.8639926 11.3866709 5.1548181 -0.6780719 0.9068906 10.2235493 2.3219281 5.9512847 NA 8.2615073 12.7604159 5.8917837 8.8898842 10.9003008 10.6816777 11.6012485 8.3359486 10.6410357 8.6483576 9.9657843 13.5447985 12.1419076 8.8376279 9.2407913 -0.6780719 8.2615073 10.2702953 10.963980 12.315751 5.876517 14.416912 8.574594 4.845490 8.705632 6.773139 9.388300 6.076816 4.679480 9.992584 7.070121 5.661778 9.917186 9.127672 8.021431 11.666779 10.501837 10.627990 6.116344 10.012799 7.338736 2.491853 10.441777 9.358102 10.431759 10.001408 11.529858 10.903599 10.101647 10.128478 8.004923 9.162706 9.170113 7.122181 10.649481 1.906891 11.189979 7.735556 11.369393 9.938477 7.371777 15.062104 10.717462 10.503080 11.465630 11.023235 NA NA 9.981032 9.398744 8.925554 TCGA-BH-A18H 63 0 NA 652 breast stage ia t1b n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 1 NA 4 2 7 4 3 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7.976338e-07 1.733986e-07 3.57142857142857 39.2857142857143 0 35.7142857142857 21.4285714285714 10.36844775 9.80979304 11.79683904 9.27269976 8.59100165 9.73114335 10.64469604 9.93636365 10.62544411 13.74974843 10.17079073 10.70185354 1.04990952 12.12872287 3.57347148 9.55769957 2.95680012 9.04849532 8.89539503 12.89803879 NA 12.98718676 0.04990952 9.42834070 10.70319788 6.90165374 -0.95009048 9.82880340 10.60353418 1.85726444 8.62165740 7.33530727 NA 6.16884658 10.07088490 10.29901839 9.95378671 11.16462332 9.91795575 10.05060917 6.12672099 11.29367396 14.69756007 8.81936259 9.52766310 11.00337385 10.17273289 3.69376571 3.13737236 9.11195097 11.93159246 NA 10.83943852 5.21983065 8.29783245 4.50933481 9.79473881 11.90808022 10.35994959 12.56424911 12.77068355 5.89539473 10.18561423 9.86879061 11.21324010 11.29901834 4.85725947 11.84391454 12.21166664 2.37183762 10.78461456 9.26300905 3.44290370 6.16884658 9.15581348 10.12337702 11.30964818 10.29664553 0.63487202 6.58128646 11.50779875 12.47630072 9.36957706 8.63110537 0.3147300 0.4939900 0.1938400 0.1643800 0.0769340 0.2292500 -0.0163530 -0.0163530 -0.5423400 -0.5423400 0.5432200 0.1385800 0.0625480 0.0000000 0.2408600 0.2408600 -0.1110900 0.3088200 0.2803500 0.2917600 3.6569000 -0.2712700 -0.2635300 0.2652300 -0.0248590 -0.0248590 2.0129000 0.1798900 -0.0073956 -0.0149960 -0.2593100 0.1752100 0.0769340 0.0769340 0.2292500 0.2292500 -0.0163530 -0.0163530 -0.0163530 -0.0679190 0.6635600 -0.5423400 -0.0762050 -0.0762050 0.4831000 0.3837900 0.0625480 0.0625480 0.0000000 0.0000000 -0.2717000 -0.2717000 -0.1110900 0.3088200 -0.2368500 -0.2197800 -0.2676200 -0.2676200 -0.0544810 0.2413300 -0.2712700 -0.2635300 -0.2739700 -0.0248590 -0.0248590 -0.2578700 0.0163630 -0.2617300 -0.2576200 0.000 0.000 -0.257 -0.257 -0.214 -0.214 -0.220 -0.268 0.000 0.033 -0.262 -0.271 -0.271 -0.274 -0.274 0.000 0.000 0.000 0.494 -0.078 0.180 0.000 -0.258 0.000 0.000 0.164 0.164 0.000 0.000 0.229 0.229 0.000 0.000 0.000 0.000 -0.542 -0.286 0.000 0.384 0.113 0.113 0.000 0.000 -0.257 -0.257 -0.214 -0.214 -0.220 -0.268 0.000 0.033 -0.262 -0.271 -0.271 -0.274 -0.274 0.000 0.000 0.000 0.494 -0.078 0.180 0.000 -0.258 0.000 0.000 0.164 0.164 0.000 0.000 0.229 0.229 0.000 0.000 0.000 0.000 -0.542 -0.286 0.000 0.384 0.113 0.113 8.05833327 NA 4.60449244 10.53824714 11.38082180 7.73580985 10.73026446 10.43039307 8.87754918 NA 13.04787822 11.14392977 4.00409684 2.75034924 1.63487202 7.25935818 3.37183762 12.07244610 11.93712554 10.59051735 9.12805569 1.85726444 8.50111586 10.41731963 8.80479251 2.21983452 2.63487202 NA 11.15940913 7.98654291 7.96578428 7.97174586 4.47616780 10.98871628 10.04425831 2.21983452 9.74164849 NA 6.56560479 11.83760345 8.86688851 7.38975522 NA 0.04990952 8.26422395 3.21983452 4.09429520 0.63487202 8.09429889 6.22213220 5.35368674 10.84310175 0.63487202 8.40965442 10.88081621 9.95679547 6.61214752 10.73815519 13.42853844 8.58712342 4.47616780 4.72232940 10.55720405 1.63487202 NA 0.63487202 0.63487202 13.041196 4.509335 8.644229 12.128723 10.223582 10.496988 12.898039 18.298194 9.103831 10.253865 13.532587 11.102813 9.111951 9.303752 1.371838 7.892255 11.552488 11.377458 12.202665 6.509336 14.086979 9.655384 7.892255 8.396419 7.505232 11.000577 8.142662 9.854036 10.170791 6.657236 5.094299 11.284722 3.219835 8.281942 10.428742 10.999002 10.151224 7.753808 9.749477 12.138362 8.358244 12.345586 9.953787 10.437384 9.938648 11.088481 10.655847 10.816020 11.160388 8.998272 NA 9.408369 8.176610 11.931592 10.049200 10.839439 5.968768 11.955668 9.794739 7.968768 13.664040 10.553234 10.178544 13.028883 10.680627 3.907891 3.511304 10.404705 9.750345 9.675614 TCGA-BH-A18I 53 0 NA 1093 breast stage iia t1c n1a cm0 (i+) female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 1 NA NA NA 4 4 3 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 40 25 0 10 25 11.2917533 10.1962746 12.0233902 9.8400257 8.4376867 9.5758975 10.2504304 10.2200567 9.8412866 12.5519667 11.9839750 10.7790455 6.1989007 12.2477386 2.6805719 9.8928685 4.4879300 8.7511430 9.9089927 12.8382901 2.4879236 13.6588681 5.4706507 9.6874992 10.8459005 7.4062254 -0.3194056 12.1718132 9.3653233 3.1830736 7.7591705 8.0857162 0.6805944 5.0613960 10.0476254 10.7709077 10.8642101 12.0996571 9.6997021 11.3402734 11.9769174 10.4211988 14.6685049 7.4680424 10.3844783 11.4195115 11.2090288 4.3810134 1.5550308 9.5333644 12.3507146 -0.9042781 11.6954089 5.9157910 7.5570914 5.6425081 10.7027113 11.8203393 10.4785064 12.6759297 12.8718396 8.0871340 11.0897889 10.8722180 11.4062250 11.5745082 4.9411016 11.9787328 9.9628909 NA 10.3859191 9.8328596 4.0813396 5.9348160 10.8959055 10.5588812 10.1724279 10.6990068 2.4879236 8.1710912 12.8087302 11.5320636 9.4141550 9.6711515 0.01417900 0.04121800 0.01090300 -0.00510600 -0.00012187 0.00000000 0.02540700 -0.65397000 1.09770000 1.06950000 1.07150000 -0.25228000 -0.25228000 0.00904810 3.65690000 1.35730000 0.01099900 0.01099900 0.00057135 0.02302200 -0.03393400 -0.23115000 -0.23115000 -0.23115000 -0.24398000 -0.24398000 -0.23727000 0.01840000 0.04941500 0.01417900 -0.24860000 0.01090300 -0.00012187 -0.00547260 0.00000000 0.00000000 0.02540700 -0.71041000 -0.65397000 0.04416600 0.00918730 -1.01040000 -0.00220010 -0.00220010 -0.00220010 0.03103100 -0.25228000 -0.25228000 0.00904810 -0.71967000 -0.71303000 -0.70611000 0.01099900 0.01099900 0.01099900 0.00057135 0.02302200 0.02302200 -0.05008400 -0.69368000 -0.22193000 -0.23115000 0.02807700 -0.24398000 -0.23727000 0.01840000 0.01170700 -0.69747000 -0.69747000 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.317 0.624 -0.231 -0.231 0.000 0.000 -0.244 -0.244 0.000 0.000 0.000 0.000 0.000 -0.697 -0.249 -0.249 0.000 0.000 0.000 0.000 0.000 0.000 -0.654 -0.654 0.000 0.000 -0.996 0.075 0.000 0.000 0.000 0.000 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.317 0.624 -0.231 -0.231 0.000 0.000 -0.244 -0.244 0.000 0.000 0.000 0.000 0.000 -0.697 -0.249 -0.249 0.000 0.000 0.000 0.000 0.000 0.000 -0.654 -0.654 0.000 0.000 -0.996 0.075 0.000 0.000 0.000 0.000 8.39825117 NA 5.88351574 10.54888287 10.75672226 7.72144922 10.50606356 10.14967041 9.21684793 0.09558691 11.89600663 11.09178028 2.73945930 1.09558691 3.95359118 8.38678293 4.43546191 11.53453401 11.41838541 10.59645413 9.22618288 7.00550554 7.82693104 9.96404898 7.55913691 5.62699391 2.73945930 -1.90454812 11.01242474 8.56627100 7.82012598 9.18042066 6.00250226 9.81633106 10.06427903 4.32442900 8.53128242 NA 7.90618410 11.98616153 8.46738872 7.01149117 -0.90427808 1.79605778 7.57539251 NA 3.97825971 -1.90454812 6.87697240 3.55635584 3.30506582 10.41782204 -1.90454812 8.34472555 10.46629961 9.76228004 5.98435465 10.00325408 13.21499923 9.08713422 3.73947010 4.53855679 11.69226791 2.00248650 NA -0.90427808 1.55503080 15.9644313 5.1724275 8.7742125 12.2477386 10.3071964 10.0803867 12.8382901 12.7803061 10.0545274 10.9626979 12.9223593 10.3405706 9.5333644 9.0685921 -0.9042781 7.1857248 11.1695864 11.350198 11.740820 6.408494 13.468543 8.920571 7.224895 9.167745 8.482553 10.457731 7.360055 7.468477 11.983975 7.196275 4.417542 11.969441 5.673042 7.270812 11.477020 10.317199 10.778387 8.374062 8.705714 13.142353 7.302626 11.755436 10.864210 10.798651 8.969825 10.787356 10.073608 10.663806 10.548626 8.893274 NA 9.139972 8.457447 12.350715 7.397108 11.695409 10.187048 10.837711 10.702711 7.464359 13.724513 10.297124 10.201521 12.883515 10.298348 2.850499 0.417488 10.693897 10.566525 9.807709 TCGA-BH-A18J 56 1 612 NA breast stage iv t4b n2 m1 female 2000 NA NA infiltrating ductal carcinoma NA white not hispanic or latino 1 2 4 NA 5 3 2 2 5 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.525908e-06 4.508365e-07 8.47457627118644 69.4915254237288 5.08474576271187 10.1694915254237 6.77966101694915 9.82473333 10.16269456 12.02322146 9.10618157 8.36585742 9.58846823 11.03708380 9.69022885 9.82584476 13.39521500 11.06794217 10.56636139 0.80512733 12.66576406 2.29057185 10.89154427 5.26457396 7.57067771 11.89194232 13.32492628 4.63296031 13.66203497 8.71083054 9.56019047 11.04855465 5.59173925 -0.51684205 11.20046254 12.91484270 2.39011735 8.56536374 8.38860157 NA 3.43741419 9.86907697 10.53578256 9.53033844 10.95285632 9.80457893 11.06276616 6.81413124 11.24289470 14.77458311 7.27639523 9.34197263 11.16642849 10.52999747 3.65314029 3.23809897 9.08961970 11.02769607 0.06818926 11.85716719 6.19057338 4.48321601 5.34119589 10.24102119 11.82459436 10.70812066 12.30837208 12.93918383 8.85499115 11.13224613 10.47968802 11.21219791 10.72549544 5.06817636 12.58231572 9.54458565 -1.51663564 10.48602950 9.07753917 2.94658116 4.80514281 10.94852580 10.04831657 10.10937989 9.17408553 4.23809897 8.90422727 13.52067569 12.41201047 9.72698359 9.41837951 2.53120000 -0.49434000 3.65690000 -0.00166290 0.92452000 0.00041593 0.00000000 0.00000000 -0.49600000 -0.49600000 0.00444110 0.00458000 0.00736090 -0.02027500 0.27206000 0.27206000 0.00360760 -0.00443120 0.00388540 0.00360760 0.01028500 -0.49788000 -0.46547000 0.06952500 0.00680440 -0.01532900 -0.01532900 0.00629540 -0.49183000 0.09536300 -0.00968060 -0.49882000 0.00097064 -0.48544000 0.00041593 -0.00332430 0.00000000 0.00000000 -0.01312700 0.09028500 0.08912700 -0.49256000 0.00523150 0.00523150 0.00523150 0.01349200 0.00736090 1.33200000 0.00471900 0.27206000 -0.49152000 -0.50836000 0.00360760 -0.00443120 -0.00443120 0.00388540 0.00889200 -0.50950000 -0.48921000 -1.07830000 -0.49788000 -0.46547000 0.03460800 -0.50619000 -0.01532900 0.26907000 0.00541390 -0.50245000 -0.51043000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.489 0.000 -0.392 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.489 0.000 -0.392 -0.488 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 0.000 0.000 0.000 7.76166425 0.06818926 6.97105491 11.04019950 11.65000527 6.20936368 12.14821729 8.86195381 9.57204911 NA 11.74839003 11.44425356 4.06818066 1.48320956 2.87552452 8.12345928 3.23809897 10.71922871 11.38558963 9.72876728 9.15652353 6.55467633 7.80964403 9.84625416 5.80514281 3.00678273 5.62276640 -0.51684205 10.86907689 5.09792256 7.25800156 9.21877051 7.99496716 10.35663177 8.89154435 2.48320956 9.21622979 1.29054236 7.95082006 12.05212067 6.85825334 8.27274827 -1.51663564 3.57068150 7.99100930 2.18364531 3.23809897 -0.51684205 2.80514797 4.61969471 0.06818926 10.88862195 -1.51663564 8.69144902 10.29137425 9.64560584 7.13426613 9.41542933 12.46611899 8.15917151 1.94264587 3.52760837 11.79411129 4.36586048 -1.51663564 1.48320956 2.80514797 13.330233 6.284114 9.520075 12.665764 9.953365 10.223417 13.324926 11.559696 9.522524 10.920707 14.360547 8.831943 9.089620 9.200891 2.653129 7.319265 10.892871 11.58732181 12.58116435 7.40802737 13.67970062 8.17844277 3.94264587 9.15032611 8.17844277 10.75934478 6.22468088 6.83194309 11.06794217 6.58650206 0.06818926 10.55400638 7.83856546 7.53719432 11.55601707 10.13157212 10.21834745 7.21792378 9.77611123 10.48673247 3.52760837 11.85893413 9.53033844 11.07707245 10.81609030 11.20324497 10.36126546 10.88915370 10.69540692 8.18538738 7.78242233 9.24933749 8.37933504 11.02769607 3.43741419 11.85716719 7.98902601 11.18495417 10.24102119 6.62787236 13.38096546 9.67920191 9.71263430 12.40784149 10.68533837 NA NA 10.11348160 9.54458565 9.41985255 TCGA-BH-A18K 46 1 2763 NA breast stage i t1 n0 m0 female 1999 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 2 NA NA NA 2 2 6 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 4.161568e-07 11.7647058823529 32.3529411764706 5.88235294117647 20.5882352941176 29.4117647058824 9.5678038 9.5771981 11.0557769 7.7854760 8.8925565 9.1507452 9.6412993 10.0017353 9.8850116 13.7138197 10.8411240 10.5559742 4.4092755 12.4739312 2.5898593 9.5282193 4.4092755 8.4896517 9.4652836 13.1998439 3.3097437 14.0507881 5.3850306 10.3665660 10.4924916 8.5711660 2.5023815 11.0595258 11.8494553 2.3097292 6.7644828 7.0220237 -1.4977713 4.3850306 9.4717742 10.5725086 10.0323061 10.5027398 9.7691742 10.9564298 4.7691740 10.4782356 14.3457935 7.8383140 10.0854705 11.0034784 10.7615424 3.9286546 2.9618270 8.6785607 11.9385786 -0.4975676 10.2497415 5.3225663 5.9202409 4.8947062 10.2015263 12.1016031 10.8516689 12.4106864 12.4259008 8.9064646 10.5600410 9.9416991 11.3173706 10.2886572 3.7118363 11.0762715 10.8047410 0.5024324 10.5251022 9.0072067 3.5978887 4.2837440 11.1303774 9.6798071 9.9541138 9.4717742 2.0873610 9.0062133 13.3504726 12.0387563 10.1659457 9.5440468 1.2235000 1.3822000 -0.0536820 -0.4121800 -0.0820760 0.3137700 0.3297100 -0.1231000 -0.8852300 -0.8852300 0.0802360 0.0286110 0.0350260 0.0042291 0.0042291 0.0075660 0.2100000 0.2100000 -0.4632200 0.4158800 -0.4201900 0.0063140 0.0000000 0.0000000 -0.4459300 2.0534000 1.8356000 0.4545300 -0.4439900 -0.4269700 -0.4021300 -0.0536820 -0.0800780 -0.0865880 0.3137700 0.3137700 0.3297100 -0.4670100 -0.1042800 0.2672600 0.2672600 -0.9028400 -0.1201100 -0.1201100 -0.1201100 -0.1201100 0.0350260 0.0447830 0.0042291 0.0042291 0.0075660 0.0075660 0.2100000 0.2100000 0.2100000 -0.4415100 0.3719100 0.3719100 -0.4201900 -0.4089900 0.0063140 0.0000000 -0.4136300 -0.4488400 -0.4056700 0.4545300 0.0145360 0.3609200 -0.6529100 0.000 0.000 0.000 0.000 0.210 0.210 -0.442 0.372 -0.420 -0.409 -0.409 0.000 0.000 -0.414 -0.414 1.128 1.128 -0.427 0.797 0.455 0.455 0.000 -0.655 0.000 0.000 0.000 0.000 0.000 0.000 0.314 0.314 0.207 -0.123 0.267 0.267 -0.885 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 0.210 0.210 -0.442 0.372 -0.420 -0.409 -0.409 0.000 0.000 -0.414 -0.414 1.128 1.128 -0.427 0.797 0.455 0.455 0.000 -0.655 0.000 0.000 0.000 0.000 0.000 0.000 0.314 0.314 0.207 -0.123 0.267 0.267 -0.885 0.000 -0.120 -0.120 0.000 0.000 8.7796750 NA 6.2572747 10.5143137 11.5500228 7.4968258 11.1274115 8.7952958 8.6922124 -1.4977713 11.6776253 11.7104955 2.4092823 2.5023815 2.2028252 8.5426775 3.9286546 10.1180173 11.4860938 10.8992599 9.3065186 2.8243198 8.4796675 9.8963142 5.7312050 5.6419390 3.7118363 NA 10.6679228 6.9862038 7.1498457 8.8004502 7.1207729 9.5487477 10.4134051 0.5024324 8.6226255 NA 7.7831587 11.8979218 8.6432173 7.9760932 -1.4977713 2.7503064 8.6996044 3.4565828 4.3603713 0.5024324 3.4565828 4.1762270 2.3097292 10.7955718 3.2572822 7.5275270 10.9811572 10.2400575 4.1748139 10.4349715 11.5672988 7.2028271 3.5023815 3.7503171 10.0352306 3.7503171 0.5024324 2.2028252 2.6723122 11.703577 7.375832 9.020057 12.473931 9.989725 12.062362 13.199844 11.354137 9.073192 10.282927 13.391369 10.298833 8.678561 10.799591 2.502382 7.341592 11.704665 10.959768 12.626913 6.864331 13.276710 8.910717 5.283748 9.203694 8.308131 10.680330 5.087348 7.344738 10.841124 5.102301 3.750317 11.031086 4.672312 7.080421 10.464561 10.011173 11.106709 9.166835 8.866522 10.452944 4.978122 12.323313 10.032306 10.812716 10.452214 10.824034 9.915487 10.181428 10.654672 8.471055 5.769174 9.698547 7.766126 11.938579 4.087353 10.249741 7.851116 10.157918 10.201526 6.907529 13.738514 10.498155 10.940400 12.727068 10.426829 1.824320 1.502382 9.884471 10.528219 9.410780 TCGA-BH-A18L 50 1 811 NA breast stage iiia t3 n1mi m0 female 2003 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 1 1 1 NA 5 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 3.121176e-07 38.2352941176471 23.5294117647059 5.88235294117647 17.6470588235294 14.7058823529412 10.2719487 10.9277609 12.1518341 10.2913770 9.8257769 8.5345332 9.9157240 9.3916223 7.9987613 13.4722037 11.9191734 10.8063494 1.2092038 13.5506078 3.6354874 6.9234737 3.1634182 8.8376737 9.8086759 13.3348029 1.2092038 13.1371448 -0.7908586 9.3992132 11.5685657 8.2162550 0.5311693 7.3538861 10.9360848 0.7941871 7.9774122 5.6354932 -1.7908586 4.5842650 9.6920359 11.0466588 9.4812745 10.2600970 9.3449372 11.2417903 NA 8.9889474 14.0397927 9.1605711 9.8979153 11.3062724 12.2039350 2.4571477 3.2536263 9.1108492 10.5711718 -0.2057297 11.1238000 2.9641213 4.7327902 3.4186757 10.1764542 12.0184937 10.6071699 10.7310738 12.7372547 8.2753172 11.1002521 10.9528001 11.1977351 11.6641698 5.3177527 11.6781065 11.5961682 3.9096675 10.3757049 10.6164957 1.3807294 4.8385837 9.6302407 9.7105676 10.8028525 11.5521360 0.7941871 4.7790811 11.1706776 10.0393469 9.6180885 8.8276136 1.412200 1.395900 -0.276970 -0.294160 0.197100 0.620870 0.970080 -0.767570 -0.790090 -0.790090 3.656900 0.164150 0.164150 -0.174740 3.421900 -0.769280 0.158610 0.158610 -0.300980 0.189800 -0.261790 -0.751760 1.066900 1.066900 -0.603540 0.206560 0.224990 1.071200 -0.205730 -0.253220 -0.052531 -0.244840 0.197100 0.184340 0.620870 0.646710 0.970080 -0.767570 -0.772620 0.394630 -0.458320 -0.790090 -0.777780 -0.768170 -0.022469 0.000000 0.164150 0.164150 -0.174740 -0.150800 -0.777950 -0.798350 0.158610 0.158610 0.122220 -0.300980 0.189800 0.215300 -0.261790 -0.741160 -0.751760 1.066900 0.360350 -0.583820 0.224990 -0.017391 -0.162050 -0.738710 -0.738710 0.164 0.164 -0.769 -0.769 0.159 0.159 -0.301 0.190 -0.262 1.142 0.401 -0.752 0.315 -0.617 0.360 -0.377 0.207 -0.243 1.152 0.000 0.986 -0.162 -0.739 0.000 0.000 -0.294 -0.294 0.197 0.197 0.621 0.621 -0.768 -0.768 -0.064 -0.458 2.867 3.657 -0.746 0.000 0.000 0.000 0.164 0.164 -0.769 -0.769 0.159 0.159 -0.301 0.190 -0.262 1.142 0.401 -0.752 0.315 -0.617 0.360 -0.377 0.207 -0.243 1.152 0.000 0.986 -0.162 -0.739 0.000 0.000 -0.294 -0.294 0.197 0.197 0.621 0.621 -0.768 -0.768 -0.064 -0.458 2.867 3.657 -0.746 0.000 0.000 0.000 7.9574207 -0.7908586 4.4380466 9.7065808 12.2684034 6.4688293 11.5098665 8.6785544 8.7354142 -1.7908586 10.5747302 12.0450070 7.6101072 0.2092662 1.2092038 7.4666157 8.7532264 9.8517309 11.7004548 11.5169980 8.7406095 -0.7908586 8.0826723 10.0834409 5.6438562 8.4137993 0.5311693 -1.7908586 10.3996700 6.0484324 2.4571477 8.0468561 3.4946332 10.3389907 10.8698925 0.7941871 8.7666916 -1.7908586 5.7249285 11.4250643 8.0197998 6.8922222 -1.7908586 7.5446183 9.4672051 NA 3.1634182 NA 3.0165855 5.1428014 1.0165676 10.8100701 NA 9.2806903 10.9971305 10.1601484 4.1865085 8.1266002 13.4004029 7.4666157 2.8530775 3.3791496 12.8078039 3.5311569 NA 1.7941871 1.0165676 13.963439 5.601545 8.499247 13.550608 9.955835 10.987305 13.334803 14.145751 8.761897 11.008712 12.989050 12.446214 9.110849 8.820253 2.732790 8.246775 11.426731 10.9352332 11.9744104 8.9105345 12.7469293 8.3268712 4.1161152 9.7604555 10.3359324 10.5670301 5.2645102 9.0726399 11.9191734 5.1634263 0.5311693 10.8072805 5.9707800 8.1059389 8.6604392 9.0181921 11.0093190 9.5640283 9.0333911 11.9479536 3.1161152 10.8913009 9.4812745 10.3975077 10.1362651 11.9034770 9.1850759 10.4727906 11.0549140 9.0206028 0.2092662 8.8110545 5.9723067 10.5711718 5.1280913 11.1238000 0.2092662 10.7940049 10.1764542 7.9542638 13.0790627 10.3519732 9.4283964 12.8248576 9.1750123 -0.2057297 -0.7908586 10.6386347 10.7885439 10.1085848 TCGA-BH-A18M 39 1 2207 NA breast stage iiia t3 n1 m0 female 2001 NA NA infiltrating ductal carcinoma 4 white not hispanic or latino 2 2 3 NA 4 3 3 3 4 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 3.467973e-08 40 30 0 20 10 10.6619686 10.6315601 12.0538031 10.0119463 8.0529304 9.2838493 10.4277534 9.5600013 10.0727479 12.7826193 11.2090432 10.5402089 0.1399933 12.3957581 3.6425399 10.1807874 7.8242052 8.3863859 8.4146134 12.5517286 4.8404783 13.4292434 5.8312034 9.8562489 10.7489119 5.2693249 NA 9.7718244 9.3323338 3.5994725 7.6398869 7.7349880 -1.4449692 4.7048277 10.0791305 10.2301535 10.4087780 11.4587722 9.8915851 11.6775830 2.4619738 11.3887593 14.8314938 8.5395396 10.2083715 12.0407821 11.0893814 5.3752584 3.7249994 9.3388952 13.0786405 -0.4449692 11.5305683 5.8679607 5.9559590 5.0628729 10.4772913 12.0228114 10.9425574 12.2529149 12.8609266 8.2693240 10.8940934 10.7210659 11.2929596 11.3942823 5.4619705 11.7728848 11.0050010 -1.4449692 10.4388673 8.9570245 3.1424461 5.6318929 11.4821157 9.4657213 10.0869473 9.6850054 3.4619738 9.9093279 14.1659592 11.9233121 10.3836117 9.7073634 0.00041593 0.89668000 -0.00567570 -0.00567570 -0.01349600 0.45922000 -0.00456950 -0.00456950 -0.00954260 -0.00954260 0.91420000 0.00069327 -0.00027724 0.44917000 0.45394000 0.45394000 0.00277450 0.00277450 -0.00705760 0.00000000 -0.00171810 0.03199900 0.03199900 0.03199900 0.02328600 0.00360760 0.02918400 0.01000600 0.02244400 0.00041593 -0.00185930 -0.00567570 -0.00387790 -0.01349600 0.45922000 0.45922000 -0.00456950 -0.00456950 -0.00456950 -0.00069303 -0.01109000 -0.00954260 0.00346870 0.00346870 0.00346870 0.00346870 -0.00027724 -0.00027724 0.44917000 0.45394000 -0.46749000 -0.46749000 0.00277450 0.00277450 0.00277450 -0.01502600 0.00000000 0.00208050 0.01195800 -0.45436000 0.03199900 0.03199900 0.00152550 0.02328600 0.02918400 0.01000600 -0.00287520 -0.32785000 -0.32785000 0.000 0.000 0.454 0.454 0.000 0.000 0.000 0.000 0.000 0.470 0.470 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.328 0.000 0.000 0.000 0.000 0.000 0.000 0.459 0.459 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.454 0.454 0.000 0.000 0.000 0.000 0.000 0.470 0.470 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.328 0.000 0.000 0.000 0.000 0.000 0.000 0.459 0.459 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3672557 NA 5.9038071 10.4798911 10.9928306 6.4859935 10.7532166 9.4824196 8.4928790 4.1400424 11.0922970 10.7922078 4.1989341 5.2275024 3.4130660 8.6171247 4.1400424 10.7736418 11.8174671 10.6375603 9.0338480 4.5774470 7.3527400 10.2034361 6.4679674 7.9708203 3.3099619 NA 11.2587659 7.4709582 6.9771437 8.9452475 6.1549922 9.6791224 10.2002866 4.5994725 8.5337891 -1.4449692 7.8312027 12.3032714 8.0267536 6.6792000 0.1399933 1.3624418 8.5063631 5.8588588 3.8770080 0.5550308 4.8949293 6.2233260 3.2555158 10.7501431 NA 9.3157985 10.2065788 9.8030061 5.4005687 9.5592991 13.3255360 8.7048256 0.8770375 3.5092778 10.3519294 -0.4449692 -1.4449692 -1.4449692 2.2555309 13.0236447 5.9038071 8.7174698 12.3957581 10.3704618 11.2358776 12.5517286 12.0587801 10.0803693 11.1969045 13.0252925 11.1103867 9.3388952 9.3437969 0.8770375 7.5121803 11.1130208 11.4739418 11.8675361 7.3816269 13.5001094 8.9844854 6.0145093 9.1125422 8.7826946 10.5351360 6.6049268 8.8206937 11.2090432 5.3364369 3.4619738 10.9530205 4.7250049 7.0248427 11.6684951 10.2498717 10.4388673 9.1277787 9.1220838 12.8155571 5.9038071 12.6723280 10.4087780 10.3946761 10.4196516 11.2940152 10.0820668 10.6161121 10.7832960 8.9548904 0.8770375 8.9389341 7.8870482 13.0786405 6.2345588 11.5305683 7.8882337 10.5059989 10.4772913 7.7399541 13.8632035 10.3356184 9.8859954 13.0225567 10.6517937 3.1989341 -0.4449692 10.6749923 10.5922823 9.4566998 TCGA-BH-A18N 88 1 1148 NA breast stage iia t2 n1b m0 female 2001 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 1 1 1 NA 2 2 1 1 3 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.427581e-07 21.4285714285714 7.14285714285714 10.7142857142857 17.8571428571429 42.8571428571429 10.8503896 10.4271050 11.6569781 9.7185065 8.4471031 8.6431134 10.4396362 9.0381997 9.1161030 13.4492737 10.7641999 10.6694955 1.0419438 13.0263207 3.8145504 9.1993087 3.7789234 8.5901413 10.3126463 13.0055200 3.6269297 13.5359421 3.1008599 10.1576295 11.3576773 5.3024909 NA 11.6061318 7.1712449 0.4570164 8.3165341 8.1008552 -1.5428785 5.1849190 9.6828091 10.3597511 12.0499233 12.0391411 9.7951784 11.2264238 NA 11.9434571 14.3545374 7.7621262 9.8233214 12.4960038 11.3978633 3.2118844 5.8057284 9.4591109 12.7275135 -0.5430887 10.9187343 8.3426956 4.9327321 3.4570032 10.4332053 11.8234580 10.3262073 11.7510454 12.8572782 8.1469973 11.0091879 10.8773200 11.3400242 11.3436483 5.4793664 11.4355308 13.0465918 1.6269063 10.8172976 9.4513525 2.9905556 5.0717069 11.1062553 10.6867192 10.6508325 10.5274555 2.1574318 8.7120276 11.9882587 10.7789272 9.6080156 9.4053664 -0.0286040 -0.0362200 0.4641700 0.4641700 0.4610700 0.9936400 -0.0253750 -0.0503710 -1.1169000 -1.0470000 1.5441000 -0.0217840 -0.0217840 -0.0343590 -0.0223320 -0.0309500 0.4723800 0.4678300 0.4513900 -0.0294480 0.5022100 0.5166400 0.5015100 0.5015100 0.4970100 0.4970100 0.5135000 0.5199600 0.0000000 -0.0272610 0.0179630 0.4641700 0.4975300 0.4509500 0.9746800 0.9746800 -0.0209610 -0.0503710 -0.0368100 -0.0318320 -0.0239770 -1.1376000 -0.0419740 -0.0419740 -0.0206870 -0.0206870 -0.0217840 -0.0217840 -0.0150540 -0.0223320 -0.0309500 -0.0162920 0.4723800 0.4678300 0.5095000 0.4367100 -0.0294480 -0.0294480 0.4977000 -0.5750600 0.5166400 0.5015100 0.4749500 0.4970100 0.4970100 0.5107200 -0.0476660 -0.0069195 -0.0069195 0.000 0.000 0.000 0.000 0.472 0.472 0.437 0.000 0.502 1.532 -0.550 0.517 0.517 0.489 0.489 0.497 0.497 0.000 0.000 0.511 0.511 0.000 0.000 0.000 0.000 0.464 0.464 0.461 0.461 0.975 0.975 0.000 0.000 0.000 0.000 -1.138 1.521 0.000 0.000 0.228 0.228 0.000 0.000 0.000 0.000 0.472 0.472 0.437 0.000 0.502 1.532 -0.550 0.517 0.517 0.489 0.489 0.497 0.497 0.000 0.000 0.511 0.511 0.000 0.000 0.000 0.000 0.464 0.464 0.461 0.461 0.975 0.975 0.000 0.000 0.000 0.000 -1.138 1.521 0.000 0.000 0.228 0.228 8.56943869 NA 6.23835888 10.49968447 11.46437686 7.60890384 10.91412348 8.59936169 9.09399532 0.45701636 11.28692001 10.42898810 5.30249088 3.98056461 4.43428127 8.46262374 2.84931877 8.92358539 11.28751431 10.56748242 8.90097878 5.12942316 7.85360399 10.05598205 6.39951292 1.04194383 1.04194383 NA 10.66218146 5.28988978 8.13999381 8.21688745 5.22518237 11.74290122 9.71850650 4.68581684 8.39216413 2.04197886 8.79462088 12.01374464 10.17596003 8.17467556 NA 8.08088040 8.03442813 -1.54287854 3.50138819 -1.54287854 1.26435627 6.96713056 1.04194383 10.25019596 -1.54287854 6.97663515 10.11521055 9.66949543 4.56552406 8.95883630 11.44621621 6.92052317 2.36389995 1.62690633 12.62441726 3.62692969 NA NA 0.04194383 13.827444 4.238359 8.872741 13.026321 10.465077 10.039612 13.005520 12.934504 8.853604 11.031120 12.164897 9.802959 9.459111 7.721442 -1.542879 7.495918 11.197412 10.787356 11.651910 8.432847 13.185131 8.190014 3.041961 9.153097 9.002929 10.405312 6.296202 4.363893 10.764200 5.866391 1.916438 10.516344 8.861076 6.812923 10.184069 9.306404 10.463325 9.858945 8.883264 12.506592 1.041944 13.382114 12.049923 10.008707 9.474504 12.904018 9.677982 10.200571 10.316534 9.225183 NA 9.155487 5.586281 12.727513 1.457016 10.918734 6.621905 10.572043 10.433205 6.827687 13.284291 9.950855 10.059698 11.924859 9.661570 NA NA 10.595911 10.136479 9.792389 TCGA-BH-A18P 60 1 921 NA breast stage i t1 n0 m0 female 2003 NA NA infiltrating ductal carcinoma 0 white NA 1 2 2 NA 6 2 2 2 5 5 NA NA 0 0 0 0 0 0 6 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 7.386782e-06 2.774378e-06 11.4093959731544 75.1677852348993 3.02013422818792 8.05369127516778 2.3489932885906 10.7259404 10.7537448 12.0502995 10.2913268 7.1319032 9.1809698 10.7442281 9.7998162 10.0791569 10.4695660 11.3414585 10.7200015 0.1356662 13.5183793 4.0425568 8.5786089 6.1431607 8.2955366 8.8916655 13.7814363 -0.4492963 13.3224501 8.6670466 8.8233325 10.8224575 6.3451178 NA 10.9967522 10.2039957 2.5507037 9.1836979 6.5675105 NA 4.3835937 10.5117907 10.7747045 9.6507080 10.4493042 11.1148523 12.2666647 0.8726318 10.3221923 15.1531407 8.5743464 10.5492932 11.7278108 11.6860914 5.7206287 5.5507037 9.2615092 10.9510485 -0.4492963 11.2917484 4.2786242 6.2649492 4.3580586 11.0139717 12.1974864 10.1654127 11.1501507 13.2942224 8.6341819 11.2106987 10.8501255 11.6605334 11.3899066 5.2921707 12.0006252 11.9300811 -0.4492963 10.1062506 9.4249158 2.8279409 4.9769685 10.6285199 11.1117520 9.7023537 10.0410522 -1.4492963 10.6365072 13.5536057 11.8138252 10.3989344 9.5244001 0.97874000 0.97874000 0.01153900 -0.00456950 -0.00636680 0.00000000 0.00208060 -0.00774820 0.00110930 0.00110930 0.00110930 0.01262800 0.01544700 0.01614600 0.08666600 0.70907000 -0.05791500 -0.07227400 -0.00166290 0.01433000 0.02216400 -0.33364000 0.33399000 -0.34090000 0.01894300 0.01894300 0.01894300 0.03693500 -0.34549000 -0.34549000 0.00124810 -0.75952000 -0.00636680 -0.00636680 0.00000000 0.00000000 0.00235810 -0.00774820 -0.00774820 0.00055459 0.00194180 0.00110930 0.01153900 0.01153900 0.01530800 0.04018500 0.01544700 0.01544700 0.01614600 -0.72853000 -0.73888000 -0.74391000 -0.05791500 -0.04129500 -0.04129500 -0.00166290 0.01433000 0.01433000 0.02216400 -0.72923000 -0.33364000 -0.34090000 -0.00622860 0.01894300 0.01894300 0.03693500 0.00123880 0.05651300 0.05651300 0.000 0.000 -0.701 -0.701 0.000 0.000 0.000 0.000 0.000 0.000 -0.729 -0.334 -0.334 0.000 0.000 0.000 0.000 -0.345 0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.701 -0.701 0.000 0.000 0.000 0.000 0.000 0.000 -0.729 -0.334 -0.334 0.000 0.000 0.000 0.000 -0.345 0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5744573 7.6928101 5.9430211 10.7281223 10.6507080 5.8495440 11.9585016 9.7180268 8.1930073 -0.4492963 11.2999437 10.5029016 0.5507037 1.1356662 4.4086847 8.6812732 3.7986312 10.4079062 10.8601791 11.2048913 9.0294725 NA 8.8464717 10.4079062 6.3386045 5.0264371 -1.4492963 NA 11.1889124 3.9430211 8.4302861 9.1809698 4.5730715 9.4877896 11.1024110 2.1356662 8.3564467 NA 8.0565142 12.7290564 7.4485483 6.5563267 NA NA 8.2972171 NA 0.8726318 -1.4492963 4.7206287 4.8762321 2.4575943 11.0124380 3.7986312 6.8590415 10.5799900 9.7429955 4.1356662 8.6073403 13.2941172 6.7355777 3.6799867 3.0742657 10.4260682 3.3580586 NA 1.3580586 1.3580586 13.177610 6.863585 8.526551 13.518379 10.475515 11.059240 13.781436 8.327136 9.930623 10.293433 13.571943 7.408684 9.261509 9.213371 1.358059 7.212481 11.954647 12.1349607 12.5648976 7.2511425 13.7998529 8.6902540 5.7891084 9.0495521 9.1309612 11.1518978 6.4515689 6.5450556 11.3414585 5.5164880 1.3580586 11.4882605 10.2584932 7.3336679 12.6696438 10.4680749 11.0520424 7.1836979 8.4665823 11.8319083 5.4695669 11.2889914 9.6507080 10.0515446 8.9235679 11.8788167 9.9962349 9.9521157 11.0493027 8.7903012 11.4036223 8.7294797 9.8789963 10.9510485 4.3580586 11.2917484 7.4241470 10.7777170 11.0139717 7.6248444 13.4783419 9.6348468 9.5528145 12.9722417 11.0392961 2.6381665 -0.4492963 10.6059852 11.0893767 9.7956611 TCGA-BH-A18Q 56 1 1692 NA breast stage iib t2 n1b m0 female 2001 NA NA infiltrating ductal carcinoma 2 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.768666e-06 7.282743e-07 8.33333333333333 20.8333333333333 4.16666666666667 44.4444444444444 22.2222222222222 10.5256263 10.4476929 11.7993308 9.2635866 8.2882317 8.6706478 9.3153436 10.9650202 11.4683296 13.4181290 11.1303521 10.9394196 2.4611880 11.9714261 4.3457157 9.6548147 7.2119661 9.7054669 10.5555767 8.8705854 1.9560938 9.8660085 8.1248895 8.9810726 11.6572764 6.6433973 1.7607745 12.7901282 10.8855223 2.5681051 8.6171802 7.8482173 0.3457370 4.4046102 10.3391275 10.4113577 9.1347074 10.7793027 10.6268745 10.4629275 6.4331798 11.6538666 15.8219677 8.7471658 10.0719355 11.0693782 10.8893935 4.2843142 -0.2392255 9.7287015 11.5486573 -1.2392255 10.7512133 4.8482173 9.1552175 4.2526049 8.8442340 12.3472427 9.7712828 11.8260026 12.8173078 6.0368791 11.7100343 11.4866428 10.9206260 11.6428246 4.8482173 12.3274034 9.1072683 NA 9.7171309 9.3991905 3.8945656 4.6434002 9.0983767 10.9256617 10.6567086 9.6781269 5.5936436 8.7061986 12.6634125 11.2086128 9.9985622 9.8268440 0.47547000 1.38160000 0.05067700 0.94650000 -0.52287000 0.02584600 -0.00512270 1.00090000 0.00000000 0.00000000 1.06180000 0.45564000 0.01405100 -0.50764000 -0.00055444 -0.00055444 1.38230000 -0.03381400 0.53995000 -0.50003000 0.02595200 -0.54310000 -0.54310000 0.42637000 0.33950000 0.36805000 0.30825000 0.46092000 -0.56316000 0.01558700 -0.70541000 -0.52113000 -0.58411000 -0.49986000 0.04089200 0.03129500 0.47375000 0.52450000 -0.06168900 -0.03299600 -0.47099000 -0.03735400 0.49372000 0.49372000 -0.50805000 -0.51434000 0.01405100 -0.49882000 -0.50764000 -0.00055444 -0.00055444 -0.45971000 0.01474900 -0.01862800 -0.01862800 -1.29290000 -0.50069000 -0.50069000 -1.00080000 0.43108000 -0.54310000 -0.54310000 -0.56445000 -0.12174000 0.34307000 0.46092000 0.42536000 0.44732000 0.44732000 0.000 0.000 -0.507 0.000 0.000 0.000 -0.483 -0.501 0.000 0.465 0.465 -0.543 -0.543 0.000 0.483 0.339 0.339 0.000 0.460 0.461 0.461 0.425 0.447 -0.433 -0.433 0.000 0.935 -0.491 -0.491 0.000 0.000 0.472 0.472 -0.481 -0.481 0.000 0.000 0.494 -0.514 0.356 0.356 0.000 0.000 -0.507 0.000 0.000 0.000 -0.483 -0.501 0.000 0.465 0.465 -0.543 -0.543 0.000 0.483 0.339 0.339 0.000 0.460 0.461 0.461 0.425 0.447 -0.433 -0.433 0.000 0.935 -0.491 -0.491 0.000 0.000 0.472 0.472 -0.481 -0.481 0.000 0.000 0.494 -0.514 0.356 0.356 7.6525381 NA 5.5022224 10.2926235 12.3915906 5.7959383 11.4160619 9.6050917 8.1123566 3.1530757 11.3846362 11.1656621 4.8482173 5.1530716 4.8482173 9.4331800 4.5421156 10.9653259 10.7297814 10.7061986 9.2546101 0.3457370 7.7178567 10.2690447 6.5289385 7.0507738 -0.2392255 0.3457370 11.6074204 5.5022224 8.1336200 8.4971565 6.7831227 10.6216865 10.6357361 5.4611946 9.9054130 3.0086841 8.4260907 13.3833786 9.0905510 6.9456299 NA 5.0086841 7.9406636 6.2921357 1.3457370 -0.2392255 5.3606663 3.4611880 4.1530757 11.6003522 5.4046102 9.7337345 10.8136623 9.8958226 4.3754635 8.6341990 13.7687018 7.9991595 6.1357934 3.4611880 10.9237754 -0.2392255 9.8071966 2.7607532 6.2685486 10.523540 8.137965 7.794178 11.971426 10.820667 11.278424 8.870585 12.006901 9.195383 11.847720 13.054801 12.280637 9.728701 8.311501 1.082703 8.364381 10.677381 10.404611 11.484416 6.714952 15.134570 8.418966 5.805148 9.407313 8.848218 9.678022 6.720757 5.542116 11.130352 10.434947 1.930662 10.498002 10.005713 9.843030 13.313424 11.036588 9.962879 8.515642 8.248595 10.641486 6.161634 11.212870 9.134707 9.938797 9.556794 12.116794 10.899666 11.132259 10.489526 9.459459 0.345737 9.531782 9.428390 11.548657 8.799674 10.751213 6.950579 11.014307 8.844234 7.832217 14.259323 9.734452 10.445942 12.857058 10.659734 2.345709 -0.525538 11.059390 9.667645 9.547024 TCGA-BH-A18R 50 1 1142 NA breast stage iia t2b n1 m0 female 2001 NA NA infiltrating ductal carcinoma 10 white not hispanic or latino 3 2 1 NA 1 1 2 4 2 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 9.52380952380952 28.5714285714286 14.2857142857143 33.3333333333333 14.2857142857143 10.463713 10.467048 11.478663 9.815923 9.476408 9.912507 9.698026 10.076339 10.792667 14.753607 11.009074 11.189524 1.249385 15.397453 4.534796 8.679846 5.409265 9.654003 7.652405 12.502502 -0.750494 13.839805 4.834357 9.278681 11.205407 4.458848 1.708805 8.255018 10.212290 3.772952 9.054331 6.483013 1.249385 3.864107 10.573855 10.724113 10.522606 10.687925 10.681413 11.772588 1.056722 10.977527 14.530853 8.307033 11.304505 11.752847 14.321735 5.990860 2.834347 9.233812 11.316996 NA 11.265157 4.399144 6.004281 4.819249 10.721577 12.248072 10.103093 11.022120 12.846631 7.119759 11.073159 10.436820 11.497321 11.094295 5.293786 11.476107 11.273494 -0.750494 9.648671 8.995908 3.195663 5.119759 11.048068 10.176060 11.340498 9.189707 2.056757 9.110480 12.251505 11.239497 10.632288 8.735223 0.46519000 1.52050000 0.49701000 -0.02616700 -0.00585470 0.00000000 -0.02548300 -0.53591000 0.00374650 0.00374650 0.98183000 -0.00678130 0.50342000 0.01084200 3.65690000 3.65690000 0.53432000 0.48492000 0.00027728 0.01782400 0.00374650 0.00013863 3.65690000 3.65690000 -0.02137300 -0.02137300 -0.03190500 0.53661000 -0.53256000 -0.00539920 -0.00207840 -0.52522000 0.03735900 -0.53774000 -0.00609040 -0.01147300 -0.00152430 -0.00885260 -0.55887000 -0.00235530 -0.01366100 -0.01188700 0.00332990 -0.01231900 -0.00013862 -0.00013862 0.50342000 0.01796300 0.01084200 -0.54411000 -0.53632000 -0.53632000 0.49009000 0.48406000 0.48406000 0.00027728 -0.00664320 -0.00664320 0.00736090 0.02791900 0.00013863 -0.54693000 0.00972760 -0.02137300 -0.03190500 -0.53144000 0.01167900 0.01796300 0.01796300 0.000 0.000 0.000 0.000 0.484 0.484 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.484 0.484 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6438562 -0.7504940 4.2717618 10.3806074 11.3007724 6.0666339 10.7195439 8.3058689 7.2317310 3.4973186 10.9326074 10.5336016 3.7412512 4.9076070 3.0567569 8.5032410 3.8932457 9.3624846 11.5558825 11.2931044 9.5903563 2.4193231 7.9376439 10.4682594 6.7690298 2.6417079 1.7088052 NA 9.4606734 7.3553018 6.7372338 9.3500558 9.5786293 9.2385894 10.2797157 3.2493998 8.9781644 NA 7.1042622 13.0703203 7.4416860 5.8343547 NA 8.1786519 8.3709271 1.7088052 1.2493847 1.4193231 5.4193198 6.3709262 3.4588413 11.8974139 NA 7.3208556 10.8530198 10.6918187 4.2493922 9.2216553 12.5043483 7.5161799 3.4588413 3.1562833 10.9509166 2.0567569 -1.7504940 0.2493847 2.0567569 13.841572 8.973907 8.617900 15.397453 10.501763 11.501911 12.502502 9.714960 11.597772 11.274706 13.153322 12.100947 9.233812 7.972201 5.004281 11.912507 12.450599 11.185479 12.350302 10.379964 14.254469 8.745248 6.575824 9.278681 8.576946 10.667344 6.357918 7.104262 11.009074 6.516181 1.056722 11.149128 5.562276 9.107071 11.284021 10.193739 10.427747 9.011775 8.605845 10.127444 7.229533 12.095364 10.522606 10.067177 9.020883 8.811636 9.933704 11.190258 10.716235 8.927113 4.082285 8.380376 7.638207 11.316996 6.761146 11.265157 6.191908 10.904316 10.721577 8.427025 14.131511 10.049080 10.063175 11.294641 10.357591 5.388944 2.056757 10.897751 10.353665 9.724620 TCGA-BH-A18S 79 1 2009 NA breast stage i t1c n0 m0 female 2003 NA NA mucinous carcinoma 0 white not hispanic or latino 1 1 1 NA 2 2 4 1 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 17.3913043478261 17.3913043478261 4.34782608695652 21.7391304347826 39.1304347826087 10.5031948 9.8139118 11.9558817 9.3096219 9.3273328 9.5858372 10.8495868 9.8154814 9.8300490 14.5819809 11.3829076 11.0339092 2.8449882 13.6401374 5.3397467 10.2069270 7.7496864 8.2788532 9.8222631 13.8782498 1.7074806 14.3396116 6.5199774 8.9733291 10.9537453 10.0794741 0.3855967 8.7938813 11.8005011 3.0293999 8.5504586 6.5654601 NA 3.5554726 10.0025599 10.4172528 9.2954448 11.3273329 9.4550014 11.4459098 8.6251503 12.1751871 14.2293500 6.6148997 9.5907339 10.9307574 11.3594283 2.5554726 3.8118204 8.9285835 9.9061703 -1.6144033 11.1206845 4.1404351 4.6143683 4.5950023 9.9251951 11.7433785 10.3162890 11.5041683 12.9507727 8.2528305 10.8663418 10.9519792 11.6975837 10.6645818 5.1669122 12.0636015 10.4289207 -1.6144033 10.0226293 9.1750852 2.1960089 5.0720500 9.3148100 9.1628070 10.5769194 9.9535077 4.0579787 9.3118475 12.3501632 12.2985345 10.0089759 8.9733291 1.52810000 1.71360000 0.01467800 0.01944900 0.04747600 0.02244400 -0.00263220 -0.90542000 0.61281000 0.61281000 -0.38817000 -0.00567570 -0.00843850 -0.00911770 -0.00911770 0.03143600 0.00000000 0.00000000 -1.03880000 0.00374650 -0.03463400 0.68887000 0.72093000 0.72093000 -0.10592000 -0.10592000 -0.10592000 -0.04549900 -0.08910700 -0.00069303 -0.00899060 0.01467800 0.02440800 0.06258100 0.02244400 0.02244400 -0.00263220 -0.93037000 -0.94176000 -0.06281200 0.00277450 -0.37696000 -0.88411000 0.02651400 -0.00774820 -0.10039000 -0.00843850 0.00958830 -0.00911770 -0.00911770 -0.01725400 -0.01725400 0.00000000 0.00000000 0.00000000 -0.90404000 0.00374650 -0.03626500 -0.03013100 -0.04387300 -0.89748000 0.72093000 0.01726400 -0.10592000 -0.10592000 -0.04549900 0.03453600 -0.08715300 -0.08333300 0.000 0.000 0.000 0.000 0.000 0.000 -0.907 0.000 0.000 0.000 0.000 -0.828 0.721 0.000 0.000 -0.106 -0.106 0.000 1.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.888 -0.888 0.000 0.000 -0.338 -0.232 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.907 0.000 0.000 0.000 0.000 -0.828 0.721 0.000 0.000 -0.106 -0.106 0.000 1.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.888 -0.888 0.000 0.000 -0.338 -0.232 0.000 0.000 0.000 0.000 8.8097180 NA 4.3397503 10.4401559 11.7189865 7.7645837 12.1714127 7.5522672 8.9886029 -1.6144033 12.2137873 11.2132575 2.3855415 3.3397503 2.2924284 7.5044925 3.2435320 9.7960029 11.6226122 11.7983861 9.5238234 6.7029636 8.2310416 9.7469472 5.2681948 2.2924284 NA -1.6144033 10.9632165 7.5654609 4.6893327 8.2009349 4.1134755 10.2847575 10.8256421 5.4408326 7.8118165 NA 8.4835836 12.8772169 7.0997970 6.8693668 -0.0294408 -0.6144033 9.5302099 6.8733912 3.4730206 2.3855415 3.9705132 5.8774056 0.7074364 9.7254017 3.8449882 5.7864317 10.6405802 10.0158188 9.6149713 10.0321104 11.5784609 7.7735691 1.8449882 2.0860024 13.2732958 3.1404351 NA 0.3855967 0.3855967 13.9604091 3.5950023 9.2200227 13.6401374 9.6916076 11.6684952 13.8782498 12.2165619 9.3876635 10.7800143 13.0851783 10.1117697 8.9285835 7.3685449 -0.0294408 7.9110726 11.9102158 10.3010576 11.8193978 8.1437750 13.9429241 8.8592574 3.7431056 8.9845347 8.6709540 9.8070643 5.6047207 8.7681757 11.3829076 6.4079186 -0.6144033 10.5793850 8.3221896 6.1680904 11.7008427 10.2605330 11.2501247 8.9752028 8.7981215 12.6127163 3.7074806 9.8189649 9.2954448 10.5744495 10.3498925 10.7301249 8.6836144 10.1383504 10.4330164 9.2697221 -1.6144033 9.0945578 9.2786028 9.9061703 3.6334777 11.1206845 5.5454217 10.6260448 9.9251951 7.1168710 13.7855972 10.4065316 9.8107675 13.1883204 9.4908054 NA NA 10.4347195 10.7741071 8.8774047 TCGA-BH-A18T 70 1 224 NA breast stage iia t2 n0 m0 female 2003 NA NA infiltrating ductal carcinoma NA white not hispanic or latino 1 2 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.699307e-06 5.548757e-07 10 20 11.4285714285714 40 18.5714285714286 8.5240527 9.7797374 11.4205843 10.4370294 8.2944089 10.3077561 9.5403807 10.1372774 10.7539655 13.1463067 10.1411063 10.5461676 1.2596039 12.5110923 2.7190520 7.6454725 6.1844231 9.1199210 8.2225061 4.5263944 -1.7403358 10.4962221 10.2902771 8.5982796 11.5628199 5.3576435 1.5815441 8.3628977 11.2311535 1.2596039 9.0211613 7.4469617 -1.7403358 4.4690654 9.0061244 11.6604893 9.5217047 10.1097967 9.4944274 10.8396329 0.2596642 7.4836119 14.4684158 7.0587949 8.4519026 11.0913130 11.6682050 3.7514637 NA 9.5616776 10.2397495 NA 10.6398004 3.7514637 5.8962355 6.3785515 10.7826817 12.1522476 9.7004791 11.5754671 13.2464741 6.2079768 12.1892382 11.7465543 11.5486201 11.1005845 5.5054464 12.5595334 7.9016616 -0.7403358 10.3074154 9.3283882 3.5158638 4.4884315 12.1750225 10.4562120 10.8270907 10.1521527 0.8445463 2.9034625 12.0933895 11.5622488 9.8613807 9.1074501 1.519300 1.112100 0.427550 0.393130 -0.056577 0.389490 0.303620 -0.567530 -0.575550 1.267100 2.777000 1.281700 0.955700 -0.558170 2.109900 2.109900 3.656900 0.014749 -0.213300 -0.553270 -0.252010 -0.544750 -0.036946 -0.059269 0.305050 3.270700 -0.531650 0.416300 -0.516090 -0.107620 0.187370 -0.536120 -0.581860 -0.570410 -0.577530 -0.568230 -0.708270 -0.567530 0.004580 0.122850 -0.592730 -1.292900 -0.272960 -0.276410 -0.464080 -0.476810 -0.551860 -0.561470 -0.515370 -0.052396 0.521360 0.456830 0.312090 0.014749 0.016705 -0.187480 -0.562060 -0.562060 -0.544010 -0.527910 -0.544750 -0.036946 1.448600 0.323980 -0.531650 -0.613830 -0.030404 -0.551160 -0.558670 0.720 -0.561 -0.558 0.521 0.000 0.000 -0.187 -0.562 -0.252 0.399 -0.099 -0.484 0.000 0.875 1.449 0.305 0.305 -0.108 1.005 0.364 0.364 0.000 -0.538 0.239 0.239 -0.560 -0.177 -0.503 0.000 -0.568 -0.568 0.192 0.000 0.000 0.000 -0.576 -0.576 -0.276 -0.437 0.000 0.000 0.720 -0.561 -0.558 0.521 0.000 0.000 -0.187 -0.562 -0.252 0.399 -0.099 -0.484 0.000 0.875 1.449 0.305 0.305 -0.108 1.005 0.364 0.364 0.000 -0.538 0.239 0.239 -0.560 -0.177 -0.503 0.000 -0.568 -0.568 0.192 0.000 0.000 0.000 -0.576 -0.576 -0.276 -0.437 0.000 0.000 8.5916465 NA 3.3888921 10.4055421 11.9363384 5.2748580 11.0588915 8.1865729 7.3372267 0.5814959 10.9841238 11.0894496 1.2596039 NA 3.7831737 9.8375108 2.5075410 9.6999600 11.7590821 11.9173750 9.1649969 -1.7403358 8.6039060 9.7097902 5.7594568 4.9178232 NA 0.2596642 9.9231681 2.0669502 7.2511321 10.7646771 5.1664985 9.9416652 11.0438358 2.3470703 9.1483533 4.7831737 5.2253945 12.3106489 7.6816748 6.2482938 NA 1.7190520 8.6149608 1.7190520 1.0669502 -1.7403358 4.8294640 1.4295356 6.4836110 11.3503840 4.4884315 6.9704165 10.9630810 10.7251763 3.5450170 10.6030733 13.0422498 6.8332570 3.0144981 2.3470703 11.5582453 1.9600668 2.7190520 6.1604765 4.8595224 13.735407 11.765669 8.202124 12.511092 9.880288 11.648569 4.526394 7.599460 10.796343 11.414586 13.116181 12.478022 9.561678 8.763436 2.429536 7.883491 10.799738 10.7839068 11.3787131 3.6171574 13.8487338 8.5905268 4.9320375 9.9858281 9.7674045 10.6112974 5.3681328 3.1665066 10.1411063 9.9552733 1.0669502 10.9063936 9.1739951 8.3930090 13.3190389 10.9023386 10.2268361 5.5724926 7.3230052 10.1665006 4.5994606 10.7304239 9.5217047 9.6827259 10.2119872 11.7603273 10.3236790 11.0265528 10.5164083 10.4488167 NA 9.6312831 5.0277954 10.2397495 4.3681328 10.6398004 5.8218530 9.7439293 10.7826817 8.0637407 14.3017181 10.0290346 10.4848174 13.1717040 12.5827351 0.2596642 NA 10.7892845 9.8953281 9.2978430 TCGA-BH-A18U 72 1 1563 NA breast stage iiia t2 n2a m0 female 2003 NA NA infiltrating ductal carcinoma 9 white not hispanic or latino 3 2 1 NA 4 3 2 2 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.942065e-06 1.040392e-06 19.5402298850575 39.0804597701149 1.14942528735632 26.4367816091954 13.7931034482759 10.4791391 10.2743554 11.3521207 9.3675672 9.2145394 9.7969372 9.2128302 10.1886840 9.6693824 13.2207722 10.8043342 10.7330791 3.2474719 16.9980641 3.0161397 7.7617128 6.2272963 8.2051129 6.5478678 12.7103164 NA 13.9081956 0.8145094 9.7912213 11.7400684 7.0700147 3.0161397 10.0117307 11.0622042 -1.5075828 8.1436378 6.7733568 NA 5.1507993 10.8012094 9.6212248 7.2306786 12.5587592 9.7716161 10.6423330 NA 9.7529175 14.6119323 8.5607998 9.4569269 11.1139510 11.4374809 4.1072945 6.0999158 9.1614708 11.8638180 -1.5075828 10.6977683 6.0394806 6.1292109 5.3254764 9.9899388 12.3074687 10.1350890 11.0329561 12.9062799 6.7262059 10.6244428 9.8320518 11.2718949 10.7620048 4.7779877 14.0520825 9.7286001 1.8145094 9.7020393 9.5315049 2.2226809 5.4698664 9.1146377 9.8757501 10.2566281 10.5052104 3.2999480 9.8913296 12.4942580 10.7811636 9.6848787 8.1310220 0.6847800 1.0359000 0.7631200 1.7735000 0.2467200 0.4500600 0.4854700 0.5795700 0.5715200 -0.0557420 1.5725000 -0.0754520 -0.0407250 1.1132000 0.8514600 0.8514600 -0.0396380 -0.0396380 -0.5633400 -0.2176000 -0.2261100 -0.3306100 3.6569000 0.2852000 -0.3392700 0.0788990 0.1992600 1.1421000 -0.3367300 -0.5619900 -0.0130990 0.8233700 -0.6599100 -0.0016354 0.4906500 0.4906500 -0.6744100 -0.6036900 0.0156150 -0.3057800 -0.3298000 0.0686930 -0.9190300 -0.5763200 -0.2558600 0.3621800 -0.0407250 -0.0407250 -0.6526500 0.8514600 0.7845700 0.7845700 -0.0396380 -0.0396380 -0.0396380 -0.5925300 -0.6064900 -0.3141000 -0.2261100 -0.7068200 -1.2929000 0.4069700 -0.8874100 -0.3565600 0.0788990 1.1421000 0.1180300 0.2659600 0.6801600 0.000 0.000 0.000 0.749 0.000 0.000 -0.593 -0.552 -0.226 -0.422 -0.593 -0.161 0.200 -0.187 -0.378 0.000 0.000 -0.337 0.456 1.142 1.142 -0.239 0.266 0.000 0.000 0.594 0.594 -0.550 -0.550 0.491 0.491 0.000 0.000 -0.301 -0.301 -0.323 1.314 -0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.749 0.000 0.000 -0.593 -0.552 -0.226 -0.422 -0.593 -0.161 0.200 -0.187 -0.378 0.000 0.000 -0.337 0.456 1.142 1.142 -0.239 0.266 0.000 0.000 0.594 0.594 -0.550 -0.550 0.491 0.491 0.000 0.000 -0.301 -0.301 -0.323 1.314 -0.576 0.000 0.000 0.000 8.00828575 0.07751647 4.49258388 9.49610378 11.41665610 6.74065642 10.11692443 9.55950252 8.60779856 NA 11.92382231 11.50812292 4.44677895 0.81450941 2.29994795 8.32547591 4.62187019 11.40753158 11.75041570 10.86163789 9.18432940 2.49259669 7.50660670 9.38132923 6.07754851 9.03271387 NA NA 10.21795213 5.52600932 5.32547636 9.24914214 8.90197677 9.77661759 10.69470977 2.66250176 8.84020734 0.81450941 6.49821097 13.29039939 8.30155015 6.80999830 -1.50758276 6.06244124 9.03755025 6.22050602 2.39947191 -0.50737767 4.53697916 7.10220774 1.81450941 11.21816518 -0.50737767 5.07754638 10.55564382 10.06670638 4.37522714 9.43876109 13.58145694 8.47415330 4.66251315 4.16501148 10.56270684 2.58004898 -0.50737767 0.07751647 0.49262233 12.497762 6.260771 8.784908 16.998064 9.218804 11.342186 12.710316 10.969332 10.228133 10.489059 12.778638 10.630858 9.161471 8.961210 2.299948 8.187814 11.230678 10.46089273 11.43821263 7.20683171 13.52871572 8.21539321 4.35056797 9.25662811 10.68395360 10.18567208 5.87629101 3.91885370 10.80433418 6.64740374 3.35056797 10.48941248 6.01614862 7.97696559 11.62524628 9.24077869 10.57340340 9.29348590 7.85452995 11.10060965 6.54786776 11.65682664 7.23067857 9.77045445 10.74347643 11.07213756 8.70082011 9.64993281 10.86300085 9.96933212 8.00828575 9.12634414 7.60372129 11.86381803 6.98042637 10.69776826 7.69960021 10.62925670 9.98993883 7.59332688 13.61322879 10.34550549 11.44514514 12.94881196 9.85343292 1.07751647 0.07751647 10.04765426 9.77219645 9.82630028 TCGA-BH-A18V 48 1 1556 NA breast stage iib t2 n1b m0 female 2001 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4.369646e-06 1.387189e-06 2.9585798816568 44.9704142011834 4.73372781065089 28.4023668639053 18.9349112426036 9.521809468 9.667097346 11.266300545 10.205237564 7.884524051 8.816156796 10.118002497 11.123370876 11.847375417 14.264552418 10.515943420 10.928120821 1.866195849 12.346804016 3.050623586 9.867221587 4.050623586 10.928856840 8.864146516 5.395450163 -1.593354492 9.190582516 9.510053621 9.001771286 11.261634120 6.630768022 -0.008246888 10.177842442 11.113693403 2.214124805 9.620477544 8.651129566 NA 4.976620255 9.602753046 11.580911213 9.102863856 10.559367530 9.179080297 11.056021966 2.728704197 6.174949644 14.932989886 8.047589099 10.231724476 11.106771903 10.717662544 2.991734975 NA 10.744666354 10.064530858 NA 11.256757233 4.710547483 7.277130218 7.757704684 11.023544309 11.985845956 10.651724164 10.997118920 13.353900404 7.349280344 10.492238265 10.678354270 11.676622935 11.198132158 4.914559740 12.919382786 9.422180850 4.976620255 10.431212902 8.545037435 4.167783415 5.372551681 9.395450377 11.014327255 10.423574074 10.486250587 0.728660667 6.566637089 12.895986543 10.377950020 9.571044203 9.865172320 2.064000 -0.100790 -0.051316 1.719200 -0.400860 1.330900 -0.476590 -0.063435 -0.476910 -0.476910 2.341800 1.725900 -0.062495 0.355280 1.361700 0.333670 0.393800 -0.475860 2.555800 -0.464300 1.016300 -0.448030 -0.022881 -0.465670 0.348110 0.348110 -0.433330 0.504290 -0.455110 -0.479130 -0.519430 -0.051316 -1.292900 -0.594870 -0.483550 -0.483550 -0.476590 -0.119780 -0.489110 -0.478180 -0.519550 -0.552260 0.296920 -1.292900 -0.473630 0.365100 -0.062495 0.323500 -0.484810 0.360510 -0.499340 -0.496730 1.322800 -0.458220 -0.943270 0.247470 -0.437340 0.307130 0.283110 1.278200 -0.464620 -0.022881 -0.477230 -0.460890 -0.433330 -0.477440 -0.472020 -0.474270 0.416300 -0.359 -0.463 0.334 0.334 1.245 -0.458 0.245 0.000 0.275 0.302 0.302 -0.447 -0.447 -0.460 -0.460 0.348 0.348 0.000 0.106 -0.477 -0.477 -0.456 -0.474 0.296 0.296 0.000 0.557 -0.478 -0.478 -0.487 -0.487 0.000 0.000 0.315 0.315 -0.477 1.043 0.344 0.344 0.000 0.000 -0.359 -0.463 0.334 0.334 1.245 -0.458 0.245 0.000 0.275 0.302 0.302 -0.447 -0.447 -0.460 -0.460 0.348 0.348 0.000 0.106 -0.477 -0.477 -0.456 -0.474 0.296 0.296 0.000 0.557 -0.478 -0.478 -0.487 -0.487 0.000 0.000 0.315 0.315 -0.477 1.043 0.344 0.344 0.000 0.000 7.5965901 NA 6.0506214 10.0492688 10.9140649 4.4231277 11.0774220 10.4910593 7.8320444 2.4067543 13.3491886 11.3084680 2.4067543 NA 3.4511583 8.4081739 3.7990873 10.9534191 12.1113179 12.2919855 9.7076903 NA 8.3754326 10.5247335 6.7286933 3.7286933 1.4067543 -0.5931368 10.4060612 0.7286607 8.4701610 8.8413939 9.3826137 9.2249965 11.3467122 1.7287042 9.4525254 0.9917531 7.9420412 11.8181443 8.7421561 6.7331957 0.7286607 -1.5933545 7.7488402 2.1072192 1.4067543 NA 5.6921677 1.2141248 5.7904697 11.1134776 3.3609682 11.2838581 11.1656136 9.8865460 4.7466137 9.0967636 13.2368353 9.2962697 6.5100536 3.1616459 9.8450379 1.2141248 NA -1.5933545 4.3609612 13.659542 7.748840 8.019634 12.346804 11.046333 10.389759 5.395450 11.704399 9.502822 11.481889 14.794985 12.801228 10.744666 7.025152 3.654688 7.343403 11.369120 11.027444 12.308104 4.384043 13.825111 8.405356 9.061402 8.571673 10.109371 10.719399 6.833030 4.596589 10.515943 1.406754 -1.593354 10.993136 8.218943 10.908496 12.437174 11.001557 11.650832 8.136387 7.814034 9.689854 6.742156 10.858453 9.102864 9.929347 9.855398 12.022051 11.851004 10.911336 10.440877 9.612559 NA 9.133103 7.658935 10.064531 6.768710 11.256757 7.220547 10.861900 11.023544 7.982305 13.012882 9.970915 10.204022 13.038170 11.042711 3.764314 -1.593354 9.936684 10.942041 9.672967 TCGA-BH-A1EN 78 1 2127 NA breast stage iia t2 nx m0 female 1999 NA NA infiltrating ductal carcinoma NA white not hispanic or latino NA NA 1 2 3 1 2 2 5 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 4.508365e-07 22.7272727272727 18.1818181818182 0 27.2727272727273 31.8181818181818 9.5360669 10.1136056 10.8485851 10.5320505 8.1296426 9.2390677 9.6407767 9.3478229 11.0688820 12.5520221 8.7373251 10.2549008 -1.6551715 17.3485476 8.8064871 10.8712624 5.0998969 7.8567604 9.0323836 12.7234381 2.7373190 7.0350058 4.7025578 9.6876381 10.8616927 6.5149334 -0.6549443 7.5929354 12.6710861 2.8044460 8.9606374 6.9262082 NA 3.8368633 9.7733679 11.0244878 10.1499455 9.9495609 9.3534364 11.9644253 0.3450557 7.8247882 14.4878328 6.4955161 9.2176827 11.6282408 9.5816200 4.3894016 -0.6549443 8.8318427 10.4380952 -1.6551715 11.2243996 5.0174320 4.8044408 4.3894016 9.8981569 11.4704212 9.7791147 11.8651353 12.8014263 6.0174320 10.9718575 10.1980677 11.1388142 10.7644413 4.2757446 11.3564097 8.5459062 NA 9.8957546 8.9807260 0.9032697 5.2276525 10.2326092 9.4535322 9.7717966 9.8273116 2.5929234 9.8995966 11.6328644 11.6942890 9.8773637 8.1426692 0.726780 0.726780 -0.116130 -0.127330 -0.126940 0.329310 0.359690 -0.606220 3.656900 -0.631470 3.656900 0.314180 0.323820 3.656900 -0.599830 3.656900 -0.122390 -0.122390 -0.580480 0.327210 -0.107100 -0.083067 3.656900 0.342910 -0.073476 0.352020 0.352020 0.359040 -0.574860 -0.574860 -0.161280 -0.116130 0.338200 -0.126940 0.329310 0.311930 0.359690 -0.606220 -0.085855 0.739860 0.739860 -0.611240 -0.113910 -0.113910 0.324950 -0.592820 0.323820 0.323820 -0.592530 -0.584510 -0.604290 -0.604290 -0.122390 -0.122390 -0.122390 -0.595890 -0.117700 0.363950 -0.107100 -0.606680 -0.083067 -0.558370 -0.597660 -0.520410 0.352020 0.340150 0.341930 0.388990 0.388990 0.314 0.314 -0.574 -0.574 -0.122 -0.122 -0.580 0.327 -0.107 -0.577 -0.577 -0.558 -0.558 -0.592 -0.592 0.000 0.352 -0.575 0.152 0.340 0.340 0.342 0.389 0.700 0.700 -0.135 -0.135 0.211 -0.127 0.329 0.329 0.360 -0.606 0.740 0.740 -0.553 -0.553 -0.120 -0.120 0.000 0.000 0.314 0.314 -0.574 -0.574 -0.122 -0.122 -0.580 0.327 -0.107 -0.577 -0.577 -0.558 -0.558 -0.592 -0.592 0.000 0.352 -0.575 0.152 0.340 0.340 0.342 0.389 0.700 0.700 -0.135 -0.135 0.211 -0.127 0.329 0.329 0.360 -0.606 0.740 0.740 -0.553 -0.553 -0.120 -0.120 0.000 0.000 7.9870593 NA 3.8685682 9.5236725 11.9770942 4.0545707 11.2394466 8.5836515 8.4298160 0.9299425 13.5400723 11.9096372 2.5929234 NA 3.2992007 7.9888642 3.1523619 8.6000363 11.0961333 10.4168052 8.5702151 7.9243238 7.2337510 9.9421291 6.2933742 5.5249162 5.4110974 NA 10.4752566 7.3136749 5.0864738 8.1247272 7.0032188 8.2948344 10.1123646 2.2519008 8.5348324 NA 7.9486341 13.3156979 5.7628590 7.3450078 NA 5.4110974 8.3379461 -1.6551715 4.6117921 NA 3.1523619 3.7638683 0.3450557 10.5684062 3.3450131 9.5732251 11.0551685 10.1869651 4.0998927 9.5446801 11.2274598 8.2757451 -0.6549443 2.2519008 10.2375506 1.9299803 NA -1.6551715 1.5149554 12.4459279 7.0998948 9.3590283 17.3485476 9.5810220 11.6622790 12.7234381 9.9798189 11.8998388 10.3818682 12.6399156 9.8237774 8.8318427 9.7319479 -0.6549443 7.2904511 10.6487885 10.14104737 12.86304613 5.55445992 15.07725402 8.51117072 3.34501308 9.02272733 8.25789694 9.09512850 5.80443825 4.51493020 8.73732510 6.76286037 NA 11.62650316 8.28164586 6.42433260 12.73604990 9.17473048 10.95925751 8.33227157 8.48711489 10.34747122 3.15236192 9.12918460 10.14994548 10.57262368 8.83284793 10.86587189 8.89863706 10.24511983 10.07971730 8.99066618 -0.07005755 9.39746030 11.16932413 10.43809518 NA 11.22439957 6.13942447 9.21383037 9.89815695 6.35063161 13.65153231 10.20841971 10.41378605 11.57862743 9.78587696 NA -0.65494432 9.60416253 10.47911312 8.86464396 TCGA-BH-A1EO 68 1 2798 NA breast stage iia t1c n1 m0 female 1999 NA NA mixed histology (please specify) 1 white not hispanic or latino 2 2 4 1 5 3 1 4 4 6 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 1.040392e-07 46.4285714285714 10.7142857142857 7.14285714285714 28.5714285714286 7.14285714285714 10.1075453 10.7009636 11.4797692 10.2363151 8.1861776 9.0164300 8.9512121 10.3090491 9.8653122 13.8501308 8.8933607 10.5294879 0.7796379 12.0945793 4.4800583 9.6135626 5.7645107 8.3720754 9.8084454 12.2852646 NA 13.3168368 0.1947175 9.1647619 11.2893935 4.0020094 NA 9.5455951 9.5109374 2.0020184 8.0833990 8.0432789 -0.8054086 5.5345068 10.3998382 12.4174508 9.6292841 12.3695816 10.4972949 11.6693759 1.1946544 9.9694431 14.7018312 7.8925962 9.4402087 11.2002805 11.6388944 4.7182191 -0.8054086 9.6489552 11.6870099 0.1947175 10.7381711 8.5631623 7.6540875 6.0894727 10.9335926 11.6751937 9.7357525 12.5822694 12.7050493 7.7945686 11.0723235 10.6082574 11.4351492 10.9615989 5.2821173 12.1075453 12.3353260 0.1947175 10.4995776 9.4294733 1.5165699 6.9293661 10.6784717 10.4944363 9.7540330 11.2434834 5.0275478 8.4162431 13.7622556 13.2239432 10.2540004 9.3770502 0.61100000 0.62533000 -0.00152430 -0.01986300 -0.03068300 0.29676000 0.33221000 0.29333000 3.65690000 2.07580000 2.52150000 -0.33733000 3.65690000 0.30665000 0.37463000 0.37463000 0.36133000 0.50794000 -0.03283200 0.00083195 -0.31961000 -0.30345000 0.02820000 0.02820000 0.34941000 0.34514000 0.36559000 0.32721000 0.01880300 -0.00261020 0.02974700 0.36657000 0.00041593 -0.03735400 0.29676000 0.29676000 0.33221000 0.29333000 -0.35931000 0.31803000 0.32125000 -0.35168000 0.00000000 0.00000000 0.00000000 0.00000000 -0.72967000 -0.34274000 0.30665000 0.37463000 -0.34469000 0.64066000 0.31385000 -0.34744000 -0.34744000 -0.01697900 0.00083195 0.00083195 -0.31961000 -0.32379000 -0.30345000 0.02820000 -0.34630000 0.34941000 0.34514000 0.32721000 -0.00373950 0.05266800 0.05266800 -0.360 -0.360 0.307 0.307 3.657 -0.347 0.000 0.000 -0.320 0.026 -0.332 -0.303 0.000 -0.346 -0.346 0.345 0.345 0.000 0.592 0.327 0.327 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.297 0.297 0.293 0.293 0.304 0.304 3.305 3.657 0.000 0.000 0.106 0.106 -0.360 -0.360 0.307 0.307 3.657 -0.347 0.000 0.000 -0.320 0.026 -0.332 -0.303 0.000 -0.346 -0.346 0.345 0.345 0.000 0.592 0.327 0.327 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.297 0.297 0.293 0.293 0.304 0.304 3.305 3.657 0.000 0.000 0.106 0.106 7.3290823 NA 5.5165825 9.1776495 10.4390198 5.6111576 9.8112048 9.7307575 8.1072459 3.7182191 12.2634342 11.7166661 1.1946544 4.6209207 3.4425853 8.5322780 4.6865117 10.7782089 11.6386355 10.3322876 8.9225764 0.7796379 8.0243784 8.8258330 6.8385119 5.9225761 2.3645724 NA 11.4010599 5.8670810 7.9157551 8.3595629 7.8776504 9.4002781 10.2913711 2.7796169 8.1253933 NA 8.8758943 12.4938640 6.7338153 7.3187769 NA 5.9089018 8.1974708 NA 4.8950942 NA 5.8240117 4.0704323 1.5165699 9.8475009 NA 8.3161896 10.3620741 9.4028903 5.1719354 9.8968286 12.5115031 9.3770502 3.1015492 3.2821136 10.2694664 1.1946544 NA NA 1.1946544 11.307421 5.749245 8.688512 12.094579 9.805681 10.228079 12.285265 11.010439 9.241398 11.357362 13.209897 9.728959 9.648955 9.787113 NA 7.266118 10.916610 11.223253 11.046405 5.569695 13.931163 9.190423 6.442584 8.430670 8.686509 9.822226 6.629284 5.569695 8.893361 6.194656 3.364586 10.899856 4.194654 5.809219 11.885309 10.414430 10.655112 8.265608 7.484675 12.787347 5.534507 10.305322 9.629284 10.363955 9.836708 9.788047 10.169071 11.139734 10.546699 9.180498 NA 8.939507 8.151642 11.687010 3.194654 10.738171 9.424676 10.242462 10.933593 6.756898 13.550970 9.773972 10.407152 13.199052 10.501287 1.194654 4.552205 10.792708 10.478902 9.617772 TCGA-BH-A1ES 35 1 3462 NA breast stage iib t2 n1a m0 female 1999 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 1 1 1 1 2 2 1 1 1 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 3.467973e-08 28.5714285714286 21.4285714285714 7.14285714285714 21.4285714285714 21.4285714285714 10.5664284 9.8880446 12.2848715 9.6789031 9.2829744 8.7684014 10.4031169 10.8842956 8.2980814 14.4220949 12.3172087 11.3470222 0.7130799 12.7884309 2.5204725 8.7410250 5.1054350 8.7215473 6.9799053 13.4483575 0.7130799 14.2978465 3.1725515 9.2248716 11.3917190 7.2129652 NA 10.0316616 10.3388277 1.2980717 7.3424756 8.5554692 1.2980717 2.8830342 10.6124758 9.8488281 9.7534086 11.8886684 10.2464486 11.3461141 5.5957632 11.3415644 13.9659321 8.1635878 9.3890759 10.8391780 11.5483798 4.7575140 6.7243460 9.3461141 12.1241001 -0.2868321 11.7965982 8.3820040 4.7575140 3.2980864 10.7899344 12.3458869 10.5164428 13.3603524 13.1444859 7.1888519 11.2701038 10.9841674 11.4571117 11.6903988 5.8628654 12.3963328 13.6357962 -0.2868321 10.0772535 9.8424019 1.3076617 3.6200116 10.6578309 11.3121019 11.5961439 9.9274380 3.1725515 8.8654036 13.4944786 11.4316517 10.5091584 9.6673152 0.01544700 0.00964650 0.00000000 0.00000000 -0.00166290 0.01209700 -0.45661000 -0.50854000 3.65690000 -0.72208000 0.91400000 0.01279500 0.01276100 -0.02630400 1.66800000 -0.76064000 0.02118300 0.01922300 -0.01876500 0.01335300 -0.24484000 -0.73670000 -0.28513000 -0.71568000 0.01281700 0.01281700 2.01720000 0.02848100 0.04244900 0.01544700 -0.23251000 0.00000000 0.00305220 -0.00166290 -0.76587000 0.01363200 -0.46249000 -0.50854000 -0.46600000 0.00027168 0.00430210 3.09120000 -0.54975000 -0.54975000 -0.54975000 -0.54975000 0.01276100 0.01276100 -0.02630400 -0.41641000 -0.76064000 -0.76064000 0.02118300 0.01922300 0.01922300 -0.01876500 0.01335300 0.01335300 -0.24484000 0.01992300 -0.73670000 -0.70684000 0.00343960 0.01281700 -0.71986000 0.02848100 -0.00578460 -0.74098000 -0.74098000 0.000 0.000 -0.424 -0.761 0.000 0.000 0.000 0.000 -0.245 0.000 0.000 -0.707 -0.707 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 -0.239 -0.239 0.000 0.000 0.000 0.000 0.000 0.000 -0.457 -0.457 0.000 0.000 2.893 0.914 -0.550 -0.550 -0.120 -0.120 0.000 0.000 -0.424 -0.761 0.000 0.000 0.000 0.000 -0.245 0.000 0.000 -0.707 -0.707 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 -0.239 -0.239 0.000 0.000 0.000 0.000 0.000 0.000 -0.457 -0.457 0.000 0.000 2.893 0.914 -0.550 -0.550 -0.120 -0.120 7.9562931 NA 4.5204725 10.4256458 11.0876150 6.9139689 9.9467385 8.4771944 8.4707756 NA 11.6401560 11.0023078 5.8830440 0.7130799 4.6673131 8.4944784 4.5711003 8.8294627 11.4135586 10.5911698 8.7765140 NA 8.4646630 10.2109707 4.6673131 5.1393835 4.9610445 NA 10.6041431 6.6903989 8.3204490 7.3204495 6.3569748 10.5757562 10.4721748 3.7131239 9.9491331 NA 7.9371207 11.9094136 9.0946618 6.8729900 NA 0.7130799 8.1643297 2.8830342 2.2980717 -0.2868321 0.7130799 3.5204725 0.7130799 10.9213532 2.2980717 8.4779905 10.5124004 9.8150946 4.0350432 8.7215473 11.7835753 6.0881586 0.7130799 3.6200116 10.6853807 3.1725515 0.7130799 4.2366839 1.7131239 15.629301 6.643856 8.690399 12.788431 10.308125 10.163299 13.448358 11.897994 8.497754 11.082716 12.986769 9.756146 9.346114 8.781897 NA 6.427365 13.095473 10.5780787 12.1238352 7.2677081 13.8155039 9.3148895 4.7575140 9.5896358 8.0529690 9.9841383 4.3569748 7.3784544 12.3172087 6.3130318 9.1908770 10.7506658 8.9419376 8.3287485 12.2679475 9.5972894 10.6810656 8.2089737 8.7018034 11.6792638 2.0350608 12.0449539 9.7534086 10.3296676 9.0903295 10.7486053 9.3587773 10.8533096 10.0203197 8.8137812 -0.2868321 8.2798961 8.2198428 12.1241001 3.4135535 11.7965982 8.7602429 10.3899575 10.7899344 6.6200101 13.9393052 10.5491692 9.7670448 11.5888682 11.0772535 NA 1.9178900 10.6723963 10.3864279 9.2561506 TCGA-BH-A1ET 55 1 2520 NA breast stage i t1 n0 m0 female 1999 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 1 2 3 1 2 2 4 4 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 31.8181818181818 13.6363636363636 4.54545454545455 27.2727272727273 22.7272727272727 11.6523911 10.3945765 12.0022772 10.0082454 8.5164112 9.5420504 10.9135268 10.0271202 8.9863677 13.3836336 10.9874388 10.6653577 1.7842527 12.7032001 4.2760946 8.5680606 6.2599767 8.6414474 9.5643734 13.5095834 3.4566748 13.8627699 3.1417924 9.3219475 10.9700484 6.7615233 NA 8.3813651 8.5307582 0.7842527 7.6060180 7.3673265 0.9541963 5.2518478 11.9477362 10.6171338 11.2293880 11.2775989 10.6571110 12.1797110 11.6945117 11.1124980 13.7727731 9.3935333 9.3373786 12.0331349 11.6723211 4.2760946 4.2599805 9.6060178 12.9794237 -2.2155798 11.4416738 3.7842422 6.5980242 3.5391340 11.0951405 11.8491549 10.6014273 12.0601500 13.4579393 7.3729582 10.8725351 11.0557827 11.7762969 11.4213214 5.3388309 11.7787740 8.0416318 -2.2155798 9.8898249 9.2120805 3.1421520 5.5324354 10.6295378 10.4619634 10.1853900 9.9672587 2.5391340 11.0870255 13.1368045 12.2109672 9.9093343 9.0292022 0.00069327 0.00069327 0.00069327 -0.00277070 -0.00249380 0.00000000 -0.00207840 -0.00207840 -0.00083160 -0.00083160 -0.00083160 0.00000000 0.00000000 0.00539690 0.00610900 0.00610900 0.00194180 0.00194180 -0.00318590 0.00305220 0.01237600 0.01530800 0.01530800 0.01530800 0.02132300 0.02132300 0.02132300 0.01084200 0.02496900 0.00069327 -0.00636680 0.00069327 -0.00249380 -0.00249380 -0.00747200 -0.00318590 -0.00207840 -0.00207840 -0.00207840 -0.00097017 -0.00097017 -0.00083160 -0.00475680 0.00505730 0.00505730 0.01852300 0.00000000 0.00000000 0.00539690 0.00610900 0.00610900 0.00610900 0.00194180 0.00194180 0.00194180 -0.00318590 0.00305220 0.00305220 0.00972760 -0.62179000 0.01530800 0.01530800 0.00305220 0.02132300 0.02132300 0.01084200 0.00166420 -0.59097000 -0.59531000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.042 -0.590 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.557 0.401 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.042 -0.590 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.557 0.401 8.8536935 -1.2159149 4.8066128 9.8523502 11.1887201 6.6575343 10.9888149 9.4008982 8.6012274 3.2436691 11.7748796 10.8669234 2.1765462 3.7842422 3.2436691 8.9396944 3.8066128 10.0603682 11.4767503 10.6605688 9.0679111 4.6790634 7.6941371 9.8176667 6.3915736 4.5391340 -2.2155798 NA 11.2150883 7.6729868 7.4619631 8.0416318 5.1061724 9.1924832 10.0100537 6.6971330 6.9339904 NA 7.6313008 11.9445879 8.2209553 6.6422250 -2.2155798 5.7031062 7.8822756 2.9135309 4.5257119 -2.2155798 5.6971344 6.1516579 3.3989523 9.9320847 -2.2155798 8.7877615 10.3340284 9.6680326 4.3989523 10.1434442 12.4050363 8.6546085 2.6422164 3.1765621 11.4308025 3.1417924 NA 0.3691593 -2.2155798 13.020638 4.498487 9.762239 12.703200 10.650557 10.543924 13.509583 12.267304 9.126658 11.218220 13.084096 8.652295 9.606018 7.567242 NA 7.857046 11.400678 10.9453757 12.0058309 6.9740681 13.5412417 9.3219475 6.2599767 8.8986368 8.2405982 10.5442713 6.4136009 7.7814233 10.9874388 5.4495812 2.4280888 11.6746030 2.3078074 5.7791625 10.6769763 10.1134795 11.2454674 8.9834314 8.0880244 12.1047623 5.9691182 13.2455269 11.2293880 10.5076914 9.7986131 11.5058770 9.2974778 10.5345321 10.6820892 9.7919719 -2.2155798 9.4636272 7.9125475 12.9794237 5.4424559 11.4416738 7.6297340 10.6748880 11.0951405 7.1084241 13.3486892 10.3738949 10.8667255 13.1355281 9.5151384 0.7842527 -2.2155798 10.9840694 11.1839222 9.3536248 TCGA-BH-A1EU 83 1 1286 NA breast stage i t1 n0 m0 female 1999 NA NA infiltrating ductal carcinoma NA white not hispanic or latino 2 2 3 3 2 2 4 4 4 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.040392e-07 14.2857142857143 14.2857142857143 0 28.5714285714286 42.8571428571429 11.3794808 11.0579439 11.8290401 10.6875687 8.0660246 9.9406959 9.7246544 10.3411879 8.6803261 12.6200459 11.5977786 10.7168884 4.8635024 11.3750017 4.8635024 9.0979028 7.3785862 9.0571055 9.4582364 12.8797960 2.2475022 12.9582436 7.0548669 8.8995433 10.6761453 8.5827080 -2.2757863 9.7843690 9.0294418 1.3088851 8.0116622 8.1813312 -2.2757863 4.2631095 10.7138767 10.6096465 10.4788376 11.7215706 10.5987393 12.1587086 -0.6910567 11.5952778 13.8900543 9.3819071 8.9364465 11.7567707 11.6516354 5.3750012 1.0458623 10.0280161 12.4249316 -0.6910567 11.3406138 6.0902712 8.2406349 5.7628697 10.8636613 12.0806083 10.2430948 12.2044247 13.4195046 7.3821614 10.9214740 11.4098289 11.9556963 11.4850857 6.0231577 11.7588350 9.9536702 0.7239517 10.1410113 9.6708563 4.0641586 7.0254463 10.5294924 10.4563295 10.0831506 10.6971093 3.4788424 9.1157306 13.5342706 12.7323349 10.3718581 9.1216247 0.284220 0.276470 0.037500 0.037500 -0.223420 0.295170 -0.225270 -0.222190 0.181020 0.181020 0.181020 -0.221940 -0.221940 0.026795 0.030390 0.030390 0.182530 0.181320 -0.226250 -0.064508 0.037500 -0.216390 -0.215030 -0.215030 0.035947 0.035947 0.042732 0.115400 -0.219600 0.284220 0.000000 0.037500 -0.223420 -0.223420 -0.225880 0.285800 -0.225270 -0.225230 -0.222190 0.034536 -0.216390 0.181020 0.131430 0.131430 0.131430 0.137610 -0.221940 -0.226130 0.026795 0.030390 -0.229450 -0.228830 0.182530 0.181320 0.192380 -0.226250 -0.064508 -0.064508 0.037500 -0.220590 -0.216390 -0.215030 0.283110 0.035947 0.035947 0.130510 0.019223 -0.229820 -0.235190 -0.222 -0.222 0.000 0.000 0.183 0.183 -0.226 0.000 0.000 -0.042 -0.221 -0.216 -0.216 -0.226 -0.226 0.000 0.000 -0.220 0.056 0.115 0.115 0.000 -0.214 -0.150 -0.150 0.000 0.000 -0.223 -0.223 0.255 0.255 -0.222 -0.222 0.000 0.000 0.181 0.181 0.131 0.131 0.000 0.000 -0.222 -0.222 0.000 0.000 0.183 0.183 -0.226 0.000 0.000 -0.042 -0.221 -0.216 -0.216 -0.226 -0.226 0.000 0.000 -0.220 0.056 0.115 0.115 0.000 -0.214 -0.150 -0.150 0.000 0.000 -0.223 -0.223 0.255 0.255 -0.222 -0.222 0.000 0.000 0.181 0.181 0.131 0.131 0.000 0.000 8.1956252 NA 5.5377309 9.4334646 10.5155200 6.6786691 10.2262847 10.1311833 8.3344118 5.7573727 12.5076134 11.1314674 2.4243847 4.8428934 4.3238600 8.6248170 4.1833833 10.7587491 11.4565415 10.6989023 9.3093822 5.5819297 8.3937208 9.7225405 8.4813401 8.9211667 1.0458623 NA 11.4697294 8.0265887 7.6546876 7.7393648 6.5313050 9.8998863 10.7537549 6.1162670 7.2357031 -1.2761357 8.9895651 12.7683869 9.0847972 7.0571058 -0.6910567 2.5312941 8.6976473 2.9334027 3.0458798 2.6308481 8.0322893 5.7803705 5.1502144 9.7836325 NA 9.5377313 9.6315918 9.4056278 5.5881359 10.3610278 13.3220026 10.2044879 3.9907371 4.4654195 10.7778759 1.1833912 NA -0.6910567 0.5312692 13.094011 4.518365 8.429582 11.375002 10.587809 10.482590 12.879796 12.825803 9.498210 11.820748 13.520116 10.298780 10.028016 8.851945 -2.275786 7.266982 11.631967 11.044187 11.116938 8.381483 14.028835 9.082601 8.463731 8.115194 8.194609 10.392613 7.629337 7.578819 11.597779 5.863502 3.215803 11.789366 6.881298 6.888480 11.259954 11.127228 10.850009 8.136520 6.952769 13.007617 8.282371 13.230640 10.478838 10.553871 9.039100 11.315823 9.678510 11.111160 11.074199 9.260683 NA 9.008144 7.799616 12.424932 8.243586 11.340614 7.905102 10.625190 10.863661 7.965933 13.836634 9.788693 10.377691 12.610647 9.465838 5.485501 1.630825 11.548412 10.833291 10.313133 TCGA-BH-A1EV 45 1 365 NA breast stage iiia t3 n1b m0 female 1999 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 1 2 2 2 6 1 2 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.150143e-06 5.895554e-07 17.7215189873418 59.4936708860759 1.26582278481013 11.3924050632911 10.126582278481 10.1702088 10.1162469 11.5731082 10.1303025 7.9875943 8.8093730 10.2033536 9.1832694 10.0507172 13.6112800 9.9996763 10.5948115 4.6344481 16.7363154 4.5886427 8.8043724 7.8941908 8.0459584 8.9974872 13.3582150 0.9563541 13.6556009 7.4609956 9.3909870 11.2161188 6.1736072 NA 10.6839557 10.0685543 1.6344539 8.0353270 6.8093733 -1.3654997 5.4158060 10.5178544 11.5882801 9.4617901 10.7672685 9.7905305 11.5294546 5.5769604 10.7771927 15.4086683 8.0003978 11.2282984 10.8805942 10.9198496 5.0938770 -0.3654997 9.1051063 11.0690757 -0.3654997 11.0693362 5.9382293 5.2783045 4.9563773 10.2904253 11.7993544 10.6224220 11.9855247 13.0602534 7.3418070 10.3602397 9.6931156 11.2870684 12.0599256 6.4482287 13.1871165 8.4207169 4.6568167 10.3555466 9.6484680 3.3046133 4.9742953 10.3178807 9.7566284 9.2427023 9.9715118 5.1262997 9.3959987 12.1666816 12.6863361 10.1837507 9.4900945 1.34870 0.20993 0.91178 0.58901 -0.43491 0.27174 0.23395 2.39120 0.40044 0.40044 0.56985 0.23163 0.24311 0.00000 -0.01180 -0.01180 0.20580 3.65690 -0.11913 0.24078 -0.14091 -0.52000 3.65690 0.48509 -0.17360 0.16550 0.16550 0.23272 -0.53327 -0.50660 -0.12187 -0.12588 -0.18886 -0.41859 -0.17132 -0.11834 0.22993 -0.51681 -0.53429 0.59368 -0.53716 0.40044 0.24934 0.26561 -0.14312 0.20350 0.24311 0.25840 0.00000 -0.01180 -0.01180 -0.01180 -0.13186 -0.14348 -0.14348 -0.51340 0.24078 0.24078 -0.79886 -0.51633 -0.52000 0.42049 -0.50874 -0.17360 0.16550 0.23272 0.64103 0.21039 0.21039 0.242 0.242 0.000 0.000 0.315 0.315 -0.491 0.241 -0.141 0.227 -0.516 -0.520 -0.520 -0.195 -0.504 -0.008 0.165 -0.498 0.579 0.233 0.233 0.266 0.210 0.119 -0.122 0.000 0.583 -0.420 -0.420 0.133 -0.138 0.234 0.234 0.081 -0.513 0.400 0.570 0.204 0.083 0.232 0.000 0.242 0.242 0.000 0.000 0.315 0.315 -0.491 0.241 -0.141 0.227 -0.516 -0.520 -0.520 -0.195 -0.504 -0.008 0.165 -0.498 0.579 0.233 0.233 0.266 0.210 0.119 -0.122 0.000 0.583 -0.420 -0.420 0.133 -0.138 0.234 0.234 0.081 -0.513 0.400 0.570 0.204 0.083 0.232 0.000 8.2656244 5.0267647 4.5170930 10.7617970 12.2526035 7.1291027 12.2480067 9.8655066 8.1952196 NA 12.5534969 11.0015373 2.7219194 3.5413414 3.8043737 7.8365711 5.7533879 10.0422462 11.5048121 10.7794242 10.0240787 6.3279352 7.9698378 9.6588946 6.2854984 5.6117272 -0.3654997 NA 10.8267403 8.0669895 8.2583291 8.4369638 5.5048110 10.9645632 10.1462000 3.8823789 9.2024035 -1.3654997 7.3792813 13.1285530 7.8267404 7.3826405 -1.3654997 7.7533886 8.5155615 -1.3654997 3.5886487 2.0938644 2.2194009 6.3639315 0.9563541 10.4885366 NA 5.5048110 10.0866886 9.7105950 4.0267647 9.9029894 11.8743442 7.5710852 3.2782970 3.4418022 9.8255066 3.5413414 NA -0.3654997 0.6344074 11.990675 5.415806 7.763730 16.736315 9.577189 10.006768 13.358215 12.620467 9.566662 11.285723 13.486587 9.178446 9.105106 8.923314 1.441802 7.158010 11.011929 11.5403985 12.8586753 5.4799387 13.1054195 8.4256104 3.7637302 8.7507914 9.4385786 11.3525950 6.1501474 4.1263039 9.9996763 6.4288626 3.3893328 11.8188579 5.2343595 7.3434620 11.5341820 10.3055462 11.4327167 8.4917753 8.4092344 11.0866886 3.5886487 11.2634283 9.4617901 10.1885566 9.9478974 10.5585176 9.9444922 10.6213560 11.2304042 9.2546673 10.3801217 9.3921208 7.9374291 11.0690757 4.8043737 11.0693362 8.7598609 10.6488272 10.2904253 7.5201441 13.5713614 9.6644247 10.2057261 12.4697084 10.7996685 NA -0.3654997 10.5488326 11.1808596 10.0799796 TCGA-BH-A1EW 38 1 1694 NA breast stage iia t2 n1b m0 female 1999 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 1 2 4 3 1 4 1 6 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 6.935946e-08 20 50 0 30 0 10.4594110 10.3456515 12.2031377 10.2933022 8.9065016 8.8934751 10.2953671 10.2312367 9.9343290 13.5306419 10.6650267 10.7351575 0.1088924 12.9607192 4.6531632 8.8491830 6.0630369 9.3480407 8.6583040 12.6470290 0.5238630 13.0923088 3.9833129 9.4715876 10.8587095 3.4307670 NA 11.0906452 11.0353831 1.1088255 7.5545443 8.5778034 NA 4.6531632 10.3539966 10.7466725 10.5214099 12.2587988 10.2243173 12.0966962 6.7812653 11.4522109 14.9509448 8.8647625 9.2687113 11.7780204 12.2283216 5.4065197 5.0937334 10.5781427 11.7634761 0.1088924 11.1473019 5.1963041 7.3280088 4.2243182 9.6786957 11.8925204 10.0454781 12.7422138 12.9257571 8.4911039 11.1785136 10.8426858 11.6998949 11.6426565 5.4896617 13.9738967 10.1196013 -1.4759363 10.5662209 9.8356258 2.9872299 6.6271647 10.6284763 10.5929917 11.0066856 10.9247570 6.7087528 9.2042371 12.9344614 11.8013103 9.7394105 8.9385628 0.7910300 0.7719500 0.9569300 1.2718000 0.2251500 0.8884600 -0.0159280 -0.0159280 -0.0125760 0.2538700 0.5711300 0.2282300 0.0000000 0.0553730 1.9493000 -0.1578400 0.2627900 3.6569000 0.0515300 -0.2495800 0.1937500 -0.0047079 0.4926800 0.4926800 -0.0766780 0.1825300 0.1825300 0.3822100 0.0101460 -0.2923500 -0.0202750 -0.3024000 0.2733200 0.2251500 0.0570830 0.0423070 -0.0159280 -0.0159280 -0.0120240 -0.3235600 -0.0297210 -0.5781200 -0.0145030 -0.0145030 -0.0145030 -0.0145030 0.0000000 0.0000000 0.0553730 -0.1617900 -0.2862000 -0.2862000 0.2627900 -0.2908300 -0.2908300 -0.6135500 -0.2561400 -0.2561400 -0.0744110 -0.3018100 -0.0289010 0.4926800 0.0055529 -0.2975600 0.1825300 0.3822100 -0.0655810 0.0334080 0.0523830 0.228 0.000 0.000 0.000 3.657 3.657 0.000 -0.256 0.000 -0.028 -0.302 0.000 0.493 -0.286 0.000 0.000 0.183 0.000 0.762 0.382 0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.225 0.225 0.805 0.000 0.000 0.000 0.000 0.000 -0.566 0.571 0.000 0.000 0.000 0.000 0.228 0.000 0.000 0.000 3.657 3.657 0.000 -0.256 0.000 -0.028 -0.302 0.000 0.493 -0.286 0.000 0.000 0.183 0.000 0.762 0.382 0.382 0.000 0.000 0.000 0.000 0.000 0.000 0.225 0.225 0.805 0.000 0.000 0.000 0.000 0.000 -0.566 0.571 0.000 0.000 0.000 0.000 7.7859722 1.1088255 6.5125619 10.2678705 11.4894815 6.9912384 11.0846880 10.3105311 8.3072687 5.8276590 11.7992746 11.3901558 2.1088255 1.3312466 3.9833129 8.9761187 2.5238881 10.5730455 11.4896618 11.3182935 9.3504261 5.8458062 8.4034607 8.9204824 8.1125922 6.9874016 2.8458112 -1.4759363 11.4028864 5.9996100 7.0552586 8.1107171 9.0227268 11.4876876 10.8069659 2.2243182 8.0880271 1.8457911 8.0552591 11.8799168 7.7694306 6.8726059 -0.4761370 8.4095738 8.8923840 NA 4.2787654 1.1088255 6.9075817 2.8615981 3.4780787 10.5822076 0.8458312 9.2837658 10.6710825 9.3826357 5.5238787 9.9538074 13.5433814 9.1003619 2.4307670 3.3312323 11.2798083 0.8458312 NA -1.4759363 0.5238630 14.805644 6.375627 8.994536 12.960719 9.907582 10.604695 12.647029 13.144327 8.604695 11.624047 13.459825 10.919947 10.578143 8.136746 -0.476137 8.347245 11.760490 11.657020 11.234038 6.890200 13.145872 8.741835 7.268711 7.943838 9.516816 10.420354 6.850307 7.433771 10.665027 5.663430 0.523863 11.580007 7.560052 8.263540 11.703476 10.292062 10.514336 8.114464 8.558677 13.328210 6.418696 11.808765 10.521410 10.056234 9.424744 11.627657 10.099417 10.799129 10.767349 9.478074 -1.475936 8.839537 8.834093 11.763476 6.224318 11.147302 5.031673 11.034743 9.678696 7.943838 12.816846 10.018733 9.804068 14.068269 9.794757 5.489662 1.523863 10.559020 10.301544 9.737589 TCGA-BH-A1EX 67 1 1508 NA breast stage iib t2 n1b m0 female 2000 NA NA infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 3 1 5 3 2 2 4 3 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 3.467973e-08 41.6666666666667 0 8.33333333333333 16.6666666666667 33.3333333333333 10.2463379 10.2183070 11.6824614 9.8802785 8.2837047 9.5385188 10.0838596 11.4899644 9.4536297 14.7369255 9.5499234 11.3673050 0.5023306 12.9822937 3.5023433 10.0114603 7.0285183 8.8917971 6.6655761 12.5166562 2.0872931 12.2053113 -0.4975676 9.5004653 10.9638245 5.5612375 -2.0825301 9.5448800 9.9050018 1.8242791 7.6655754 7.9576720 NA 3.8481171 10.4621056 10.6099980 10.5044568 11.6536788 10.6828758 12.1197360 11.6377337 10.4959911 14.1246829 8.9954000 8.9251108 11.6165212 11.8090713 5.3520099 7.1389701 9.2842511 12.6010352 NA 10.9161492 5.4409456 7.1935066 5.5320925 11.1694566 11.7456182 10.1975734 11.9482221 12.9506335 8.5458282 11.0444096 10.5929427 11.1882618 10.7054891 5.4487655 11.5163656 11.6210699 NA 10.6431748 9.3225240 2.1706301 6.3768148 10.9312286 10.7776936 10.1566828 9.9497727 2.2393064 9.2245835 13.5688267 12.6307691 10.6243102 9.2050948 1.1433000 1.1334000 -0.0179410 -0.0232920 0.2328100 -0.0319050 -0.0264410 -0.0264410 0.3288400 0.3288400 0.3419300 -0.0246610 -0.0246610 -0.0310860 -0.0310860 -0.0310860 0.0447150 0.0438650 0.7480300 -0.0224690 -0.0235660 0.3206000 0.3206000 0.3206000 -0.0018014 -0.0018014 -0.0018014 0.5763800 -0.0186280 1.1433000 0.0066653 -0.0179410 0.2576200 0.2328100 -0.0319050 -0.0319050 -0.0264410 -0.0264410 -0.0264410 1.1106000 1.1190000 0.3288400 -0.0324320 -0.0324320 -0.0221950 -0.0076101 -0.0246610 -0.0405700 -0.0310860 -0.0310860 -0.0310860 -0.0310860 0.0447150 0.0438650 0.0438650 0.7480300 -0.0224690 -0.0224690 -0.0235660 1.5140000 0.3206000 0.3206000 -0.0548250 -0.0018014 -0.0018014 0.5782600 0.5491200 -0.6222600 -0.6222600 0.000 0.000 0.000 0.000 0.000 0.000 0.748 0.000 0.000 1.514 1.514 0.321 0.321 0.000 0.000 0.000 0.000 0.000 1.133 0.578 0.578 0.549 -0.622 0.000 0.000 0.000 0.000 0.233 0.233 0.000 0.000 0.000 0.000 1.119 1.119 0.329 0.329 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.748 0.000 0.000 1.514 1.514 0.321 0.321 0.000 0.000 0.000 0.000 0.000 1.133 0.578 0.578 0.549 -0.622 0.000 0.000 0.000 0.000 0.233 0.233 0.000 0.000 0.000 0.000 1.119 1.119 0.329 0.329 0.000 0.000 0.000 0.000 7.7969656 7.7550104 4.6038815 9.5994993 11.6888720 6.1913652 10.9641655 9.0885657 8.5296429 2.3097001 11.3676917 11.3619536 2.2393064 1.6178157 3.9397531 9.0575732 4.3603292 10.4149849 11.4171039 10.7734190 9.0505248 -2.0825301 8.4910297 10.7120015 6.5540071 5.1365523 6.4758031 NA 11.1873858 4.8831662 7.4132378 7.7407495 8.4350518 9.4781930 10.5272538 4.1072108 7.9032245 NA 9.2171628 11.4539941 8.9821254 6.6622169 NA -1.0825301 8.6367714 1.0873271 3.3768182 3.3097001 5.8657506 3.9404205 1.6178157 10.3670471 2.2393064 8.4092356 10.3021663 9.7146388 4.6855646 9.9209005 12.3764299 9.4271576 4.3267746 3.8000301 10.2994662 1.3767905 NA 1.0873271 0.7247376 11.381450 5.900377 9.986161 12.982294 10.801030 11.286298 12.516656 10.856962 9.159246 10.938883 13.640163 8.554913 9.284251 10.358771 1.376790 7.041504 11.745420 10.81711709 12.01302681 9.00418226 15.08930034 8.72554247 6.36446563 8.75737367 8.94666975 10.16798896 6.67893388 4.57559673 9.54992344 5.09729054 -0.08268282 11.60596072 9.69997129 7.96430216 12.69699933 10.33101052 11.04602136 8.46234685 7.96723087 10.56011116 6.38090777 12.31142716 10.50445683 9.82765058 9.29187863 11.51018994 10.07851444 10.25695426 10.41747756 9.21429872 9.43111019 9.81708694 7.50319049 12.60103517 6.13655029 10.91614922 8.25834555 10.40046770 11.16945661 7.57380773 12.95308377 9.90890445 10.30000655 13.22863419 10.04085737 1.61781565 4.97970070 11.44669108 10.41498495 9.77652910 TCGA-BH-A1EY 79 1 538 NA breast stage iia t2 n0 m0 female 2000 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 2 5 3 2 2 5 5 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 5 0 0 0 0 0 0 0 0 9.363527e-07 5.201959e-07 23.2558139534884 30.2325581395349 4.65116279069767 23.2558139534884 18.6046511627907 10.23931533 10.02108769 12.01617098 9.38162536 7.83105131 9.86915981 10.57710182 10.28344481 9.17200714 13.26655446 11.26269447 10.31747095 5.78395161 12.19394332 3.87066063 9.37740078 6.75818856 7.90628754 16.08268341 12.88459079 -1.03622997 12.47131965 5.00816863 9.06180481 11.05982897 6.77112759 -1.03622997 10.38478558 9.41704341 2.13369503 7.31250091 7.43137809 NA 3.71865753 10.43086878 11.36278360 9.19978692 11.08627724 10.57848261 11.53505137 -0.03622997 10.60807967 14.01685013 8.48350746 9.57016879 11.01668038 10.51644189 4.21169754 5.23056041 9.05916976 11.62910868 NA 10.91067900 6.02986143 7.17322640 5.96377234 10.37634259 11.84354742 10.72947324 12.32941171 13.00131969 7.98891243 10.89598751 9.77294596 11.54967418 10.77313896 5.07229878 12.33132401 8.97079989 0.54873253 10.28061988 8.91942262 1.81377093 6.51066766 10.54025709 9.68743378 9.41395303 10.09369974 1.54873253 9.93962064 12.67705184 11.84851563 10.23465208 9.65813060 0.00747320 0.52101000 0.01335300 -0.00152430 0.00041593 1.08510000 -0.52849000 0.00000000 0.00430210 -0.53134000 1.03120000 0.02272500 1.60330000 -0.00387790 0.01656500 0.01656500 0.00958830 0.00305220 -0.54145000 0.01964300 0.02820000 -0.49569000 -0.49840000 -0.50297000 -0.46557000 0.03045100 0.03990200 0.04344000 0.04060900 -0.51208000 -0.00041585 -0.52726000 0.01126100 -0.53358000 0.00458000 0.00458000 -0.52849000 0.00000000 0.00000000 0.00430210 0.00124810 -0.52338000 -0.51249000 -0.51249000 0.01992300 0.01992300 -0.52859000 0.02848100 -0.48565000 0.01656500 -0.52430000 0.04244900 0.00958830 0.00305220 -0.50784000 -0.52310000 -0.51476000 -0.51476000 0.02820000 -0.49871000 -0.49569000 -0.49840000 -0.50960000 0.04338800 -0.48323000 0.03792400 0.03312700 -0.49308000 -0.49308000 0.000 0.000 -0.524 -0.524 0.000 0.000 -0.523 -0.515 0.000 0.000 -0.499 -0.498 -0.498 -0.514 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.000 0.000 -0.518 0.000 -0.512 0.000 -0.154 -0.154 0.000 0.000 -0.524 -0.524 0.000 0.000 -0.523 -0.515 0.000 0.000 -0.499 -0.498 -0.498 -0.514 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.000 0.000 -0.518 0.000 -0.512 0.000 -0.154 -0.154 8.55996246 4.05123287 5.48733520 11.04990898 10.52267176 6.80863603 10.80926282 9.13262028 9.33134044 3.87066063 13.50499039 12.92928560 2.42320165 -1.03622997 3.21169754 7.27665578 5.30362369 10.50438512 12.08157817 10.82214234 8.77434430 4.13369503 9.16467140 10.00748356 7.41498368 4.89451222 NA -0.03622997 10.61616965 4.57847988 8.29692813 8.02986198 6.32132564 9.86690149 10.01701994 3.66420975 8.59130653 1.28569813 8.23523593 11.62955279 8.65900118 7.18777467 NA 6.01905469 8.20932566 1.77112495 2.28569813 -1.03622997 6.72532399 6.43341519 3.60762622 10.19739241 NA 10.88151780 9.73855979 9.48439133 5.13369914 9.61302897 12.85089814 9.63972978 6.10332348 4.54873253 11.49344729 3.05123287 NA 4.13369503 0.54873253 12.0502407 6.3984017 8.9651808 12.1939433 9.3752838 10.0472521 12.8845908 11.2143673 9.1889802 10.9428406 12.6378546 8.3235223 9.0591698 8.9106790 0.5487325 6.8585903 11.5576307 10.897463 12.139478 5.705240 13.555002 8.791909 7.402564 7.958126 7.567399 10.488657 7.187775 9.787936 11.262694 5.809263 -1.036230 11.615049 7.082714 7.209754 10.836063 10.857074 10.545915 7.285701 8.163445 11.322699 6.864639 12.889423 9.199787 9.945340 9.391086 12.341254 9.583992 10.579862 10.477007 9.098199 NA 9.126303 8.028650 11.629109 5.338813 10.910679 8.596768 12.329822 10.376343 7.061805 12.570053 10.687434 10.289640 12.101404 10.830279 3.917966 3.040156 9.928835 9.971501 9.917242 TCGA-BH-A1F0 80 1 785 NA breast stage iia t1a n1c m0 female 2000 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino 2 3 4 3 1 1 5 5 4 7 4 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4.855162e-07 1.733986e-07 10.5263157894737 42.1052631578947 0 31.5789473684211 15.7894736842105 10.6193694 9.7762167 11.0612287 10.0394280 8.9339408 10.1071050 8.3064865 10.6098701 10.5498673 11.9498720 10.4689872 10.4321806 1.9528554 11.6948781 4.3375113 10.3620046 4.5642867 9.0642750 10.4692061 7.7371209 NA 8.0260985 8.3035433 9.6860531 9.8733677 5.8597410 -2.2169206 9.2133769 9.9718223 1.7829117 8.8252679 8.5336315 -2.2169206 6.5610022 10.3990137 10.3851593 9.3064865 10.5965052 10.5506950 11.3565716 0.1048734 11.2883639 14.6757874 7.5595874 9.2448949 11.3241421 11.4031442 4.2747760 NA 10.2500205 11.1522491 -0.2170883 11.3712877 7.5477961 8.4240730 6.8436209 11.6045988 11.7658289 10.2840152 11.3729266 12.8693510 6.0821320 10.8317519 10.6460479 11.6051965 11.1108980 4.9326707 12.2324600 9.1923153 0.3679301 10.5537948 9.8104849 3.2095313 7.6883112 9.5704189 9.9850482 10.6798244 10.6523255 2.6408985 6.5934957 12.8913264 12.9387704 9.5269172 9.5138190 0.1647500 0.2621600 -0.0164920 0.1306600 0.2016700 0.1663700 0.0164250 0.3636200 0.1257900 0.1257900 0.0183830 0.4990900 -0.0305400 0.0864330 0.0864330 0.0864330 -0.0769450 -0.0769450 -0.1179700 -0.0918160 -0.0756120 0.0555150 0.2797900 -0.0986820 0.0349590 0.0349590 -0.0278900 -0.0031859 -0.0339110 0.1647500 0.0580200 -0.0164920 -0.2327600 -0.2343500 -0.2392100 -0.2208400 0.0164250 0.0164250 0.0445740 0.0862330 0.0862330 -0.1930000 0.4510500 0.4510500 -0.0503700 -0.0503700 -0.0305400 -0.0305400 0.0864330 0.0864330 0.1114500 0.1209300 -0.0769450 -0.0769450 -0.0769450 -0.0239770 -0.0918160 -0.0918160 -0.0666540 -0.0391740 0.0555150 0.2797900 -0.1043400 0.0349590 0.0349590 -0.0031859 -0.0118870 -0.0325870 -0.0325870 0.000 0.000 0.000 0.000 0.000 0.000 -0.115 0.000 0.000 0.000 0.000 0.251 0.251 -0.104 -0.104 0.000 0.000 0.165 0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.193 0.000 0.451 0.000 0.108 0.108 0.000 0.000 0.000 0.000 0.000 0.000 -0.115 0.000 0.000 0.000 0.000 0.251 0.251 -0.104 -0.104 0.000 0.000 0.165 0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.193 0.000 0.451 0.000 0.108 0.108 7.4339759 NA 5.9018661 9.6724283 10.4848806 5.1257999 10.3283715 10.4747050 8.1522600 4.7487081 12.9078535 11.6136218 3.9326754 0.7829117 4.8382055 9.4068060 4.9224738 11.3799294 11.4654801 11.0835630 9.9221561 3.5108480 8.5708268 10.5290188 9.0171430 7.2647241 1.4833644 NA 11.6604962 7.5740871 6.8650738 8.4013100 8.5074383 9.6865313 9.8989434 5.7885500 8.8032099 4.9923787 8.0069263 12.2770925 8.0969412 7.5023131 0.9528554 1.9528554 8.5527621 0.9528554 2.6898135 NA 8.0093365 3.8301539 4.6158165 10.2540916 0.1048734 11.2662363 10.4595427 10.1009022 6.6158150 10.7853879 14.2416194 10.2477255 5.7429251 4.7602050 9.6482711 0.3679301 8.3856234 0.5902427 5.4122802 11.115800 7.854387 8.785036 11.694878 10.050881 10.339909 7.737121 10.301086 9.328072 10.783629 13.876631 11.401654 10.250021 7.780104 4.068327 7.451810 11.638280 10.671287 11.255108 6.415919 14.437126 9.672809 8.277780 8.297639 9.888833 10.061632 8.250530 7.107105 10.468987 5.843620 4.972748 10.882765 6.149247 8.393894 12.319779 11.259418 10.657522 8.142103 7.941534 10.763064 9.847667 10.417699 9.306486 10.401769 9.663656 12.071358 10.978450 11.632623 10.457558 9.514243 6.531118 9.632697 8.550629 11.152249 10.362240 11.371288 6.561002 10.679300 11.604599 7.844971 13.958766 10.392103 11.000428 14.058140 9.964698 7.691317 5.131651 10.683603 9.945001 9.776571 TCGA-BH-A1F2 53 1 959 NA breast stage iiib t4b n1b m0 female 1999 NA NA infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 1 2 7 1 2 2 5 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.005712e-06 4.508365e-07 23.8095238095238 33.3333333333333 2.38095238095238 21.4285714285714 19.047619047619 10.8999186 10.0130858 11.1667951 9.5268904 9.4221352 9.9997929 7.6301280 10.6214751 9.6505766 13.1908620 10.9162153 10.6772184 2.8138325 15.3145197 4.3777415 9.2269162 3.8138427 8.9287141 8.7781182 13.1592936 NA 13.0919360 2.6825958 9.1881237 11.0083829 7.5710488 1.8752296 6.2210148 10.7345166 1.2903064 5.6301288 7.8294367 -1.7098115 3.9627063 10.4250254 11.5011017 8.7165431 10.5241974 10.1633377 11.3058674 5.2091414 9.0164963 13.5920601 7.4166472 8.5547208 10.5756804 11.0763436 4.8901889 -0.1246917 9.3502986 11.8093000 0.8752296 11.6124880 6.0518289 6.7821307 4.1231695 11.2202762 11.9659045 9.3922539 12.4476251 13.3756676 7.4652040 10.9776539 10.8070246 11.8673529 9.8381366 4.8601335 12.4626275 9.5238979 -0.7098115 9.8672349 9.0732764 2.1971734 5.4997311 11.1259339 10.5997545 9.9582768 10.4770114 3.0976277 8.4272693 13.7830076 13.0785377 9.8270111 9.1247492 0.0931850 0.6273300 0.0754150 0.0734020 0.0037465 0.3743000 0.3813800 -0.4178400 0.4996000 0.4996000 1.2432000 0.3645700 0.3746500 0.3716600 0.3716600 -0.4587300 -0.0151910 -0.0151910 -0.0407520 0.4092800 0.0431570 0.4116200 3.6569000 0.7248900 -0.0634350 -0.0634350 -0.0634350 1.0870000 -0.8276500 0.2428000 0.2393800 0.0754150 -0.0459060 -0.0048461 -0.4276600 -0.4276600 0.3813800 -0.4178400 -0.4412300 -0.0245240 -0.0341630 -0.8711900 -0.4252700 -0.4252700 0.3448600 0.3448600 -0.4229800 -0.4459900 0.3716600 0.3716600 -0.4390600 -0.4390600 -0.0151910 -0.0238090 -0.0238090 -0.0407520 -0.0465830 -0.0465830 -0.3699700 -0.4275700 -0.4388600 -0.0920810 -0.0410240 -0.0634350 -0.0634350 0.3357700 -0.8598700 2.8662000 -0.0628980 0.348 0.000 -0.067 -0.439 0.000 0.000 0.000 0.000 0.000 0.328 -0.428 0.000 0.000 -0.044 -0.422 0.000 0.000 0.243 0.243 1.087 1.087 0.000 0.000 0.284 0.284 0.000 0.000 0.000 0.000 0.364 -0.063 0.381 0.381 0.000 0.000 -0.871 0.469 -0.404 0.345 0.000 0.000 0.348 0.000 -0.067 -0.439 0.000 0.000 0.000 0.000 0.000 0.328 -0.428 0.000 0.000 -0.044 -0.422 0.000 0.000 0.243 0.243 1.087 1.087 0.000 0.000 0.284 0.284 0.000 0.000 0.000 0.000 0.364 -0.063 0.381 0.381 0.000 0.000 -0.871 0.469 -0.404 0.345 0.000 0.000 8.3305678 -1.7098115 7.0010850 8.4387548 11.2320594 4.9816746 9.4558134 8.4925859 7.4673235 3.4997311 12.1558181 11.5930542 6.6076913 4.8294386 -0.1246917 8.2746968 3.9049850 9.1567844 11.7587749 10.9370619 9.0609420 2.8752493 7.4195608 8.9196348 5.3563657 8.9679977 2.9907189 NA 11.8097916 7.9013032 7.3856752 7.0551501 6.9377363 8.5906308 10.1136454 4.6996682 6.5848994 NA 9.1744486 12.5118653 6.8410246 6.6478297 -0.7098115 1.9907008 8.8429474 -1.7098115 4.3126434 -1.7098115 3.3777346 4.7674694 NA 9.6511253 -1.7098115 8.0518294 10.8932090 10.0936020 4.6478325 9.1835798 12.6972139 8.5082357 2.1971734 5.0045239 11.3780725 3.8138427 -0.7098115 NA 1.0976108 11.786739 6.647830 9.280382 15.314520 9.810897 10.856094 13.159294 11.317147 8.657693 10.647555 13.895700 10.304647 9.350299 9.847263 NA 8.686883 12.384356 10.7540580 10.8806313 5.6565993 12.5919173 10.4856504 4.1231695 8.4985126 8.9603768 10.6757766 3.6122109 8.5298768 10.9162153 6.5664027 -0.1246917 10.7866326 6.1850954 7.2272694 11.2326094 10.6601481 10.7350343 8.0650655 6.1911441 10.6579660 4.8601335 12.5350590 8.7165431 10.5788559 10.3309104 10.7918666 9.0699975 10.9471499 10.4595769 8.9565022 NA 7.9465063 8.3082002 11.8093000 2.7497059 11.6124880 8.9529465 9.7934082 11.2202762 6.7578833 13.7776472 9.6943553 10.7507340 12.5526667 9.8591842 -0.7098115 NA 10.5235982 10.3912689 9.2888686 TCGA-BH-A1F5 62 1 2712 NA breast stage iia t1c n1a m0 female 2002 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 3 1 2 2 1 1 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.427581e-07 17.8571428571429 21.4285714285714 0 28.5714285714286 32.1428571428571 11.5146843 10.4456569 12.1056297 9.6628670 8.9038752 8.5805593 10.6377301 10.0205471 8.2337716 13.7724176 12.1814022 10.7586381 2.3669236 11.5833336 4.0190080 8.6875737 6.3539954 8.7407316 9.0604211 13.9382128 2.8815080 14.8724268 7.3893018 9.7623153 11.2068129 7.0353127 -1.4402635 5.7883986 8.7847866 -1.4402635 6.9604584 7.9518966 NA 3.0831453 10.7763251 11.0048528 10.9510914 11.7676612 10.0831413 11.9787495 6.1594919 12.4243458 12.8091372 6.7384936 9.2832403 11.5072162 11.7705550 3.3669376 5.2874982 9.6377301 11.2708161 NA 11.3741618 7.8240219 5.8542002 3.5595775 10.9217971 12.1534372 10.0169602 12.4753653 13.3993244 7.5425730 11.6260049 11.2447748 12.3387857 11.0549347 4.8075043 12.6291130 13.1666784 -0.4404592 9.7112301 9.7524885 1.1469158 4.3409396 11.0423872 10.9761129 10.2733954 11.6015806 2.8815080 8.0634048 14.0010970 12.6395640 10.0875449 9.5239202 0.0000000 0.0000000 -0.0388260 -0.0766730 -0.0128270 0.0021045 -0.5288800 -0.8211200 1.6188000 1.6188000 1.6087000 0.0179880 0.0118890 -0.0046840 -0.0046840 -0.0046840 0.0082199 0.0021045 0.0062721 0.0107270 0.0076632 0.0324460 0.0324460 0.0324460 0.0238710 0.0238710 0.0238710 0.0156110 0.0000000 0.0000000 0.0075240 -0.0388260 0.0033538 -0.0128270 0.0021045 -0.0024701 -0.5288800 -0.5221400 -0.5399500 -0.0016389 -0.0016389 -0.8583500 0.0034927 0.0129580 0.0129580 0.0129580 0.0118890 0.0175680 -0.0021929 -0.0046840 -0.0046840 -0.0046840 0.0082199 0.0021045 0.0021045 -0.0045585 0.0107270 0.0107270 0.0076632 -0.8326700 0.0324460 0.0324460 -0.0192910 0.0238710 0.0238710 0.0156110 0.0040483 -0.8329900 -0.8946400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.897 -0.833 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.887 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.529 0.000 0.000 0.768 1.609 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.897 -0.833 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.887 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.529 0.000 0.000 0.768 1.609 0.000 0.000 0.000 0.000 8.4513628 -1.4402635 6.1064740 9.6674503 10.7638448 6.2797888 9.8559220 7.0601425 8.0239001 2.6470381 10.8213804 10.2556774 3.0190080 5.9604584 2.6470381 8.6350586 3.2600257 7.8380290 11.4175603 11.2845194 9.4513630 -1.4402635 7.1482935 9.4360962 4.4903198 2.3669236 1.5595897 NA 10.6933637 6.8724619 7.3572406 7.3442142 8.0271850 9.0045941 10.6710410 4.4422203 5.9689709 -1.4402635 7.8169670 11.6348913 9.0782325 5.4903166 NA 4.1141671 8.3987830 -0.4404592 1.1445685 0.8815080 3.8449781 6.0520724 1.5595897 9.3596703 NA 6.9983715 10.2390594 9.7799577 3.2034361 9.5086764 12.0313815 6.8216745 1.5595897 2.6470381 11.2375191 -1.4402635 NA -0.4404592 0.1445685 14.7471011 5.2320045 9.4299440 11.5833336 9.9259015 10.3552131 13.9382128 12.4955730 9.1686195 10.8941319 12.9641222 9.9631240 9.6377301 8.6377301 0.1445685 7.7269974 13.5817737 10.3470737 11.0931524 9.1360637 12.9216594 10.1975626 3.8815080 9.8015624 8.0948547 10.6017208 2.7295093 8.8003706 12.1814022 5.9259021 1.5595897 11.4975047 4.0514330 6.7497984 10.0241250 10.5840264 11.0017453 10.7090088 5.8904953 12.6071292 4.8633587 14.1133313 10.9510914 11.3833445 10.0423873 12.5201243 9.0322700 10.9700307 10.4825353 9.2934420 -0.4404592 8.0470574 7.0789407 11.2708161 5.7690338 11.3741618 7.6363948 9.9340755 10.9217971 6.8724619 13.0524339 10.7917004 11.2092845 11.9347545 9.4237653 0.1445685 3.8815080 11.7656779 10.6457155 9.8391899 TCGA-BH-A1F6 51 1 2965 NA breast NA t4d n2a mx female 1996 NA NA infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 4 4 5 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.710324e-07 6.935946e-07 22.9166666666667 14.5833333333333 6.25 27.0833333333333 29.1666666666667 10.0354933 9.0458260 11.4023417 9.5391369 8.1749986 7.6834396 9.8989615 10.5872387 11.9327598 12.8821213 10.2722575 10.1667378 3.1631767 11.7453744 2.7226190 10.1542571 7.4582868 8.7047890 9.6069988 4.8925367 -1.0846703 8.4524739 6.7732368 9.2900776 10.4255251 5.7607452 -1.0846703 9.0263909 11.3563840 3.7732368 8.2528773 7.5663068 4.0445428 6.3990719 9.0976498 10.7181755 9.2064261 10.4988083 9.4650400 11.2728074 NA 7.7638783 14.6281585 7.2774185 10.2422465 10.5202719 10.2360559 3.5591124 0.5001902 9.1295746 10.4992784 NA 10.0845541 6.5077122 6.6567223 4.5299646 10.1440740 11.8140457 10.3762232 10.3925077 12.0198541 6.1820427 10.8134788 10.4254262 10.6113535 10.7634871 4.8459918 11.7583913 8.4698441 NA 10.3767348 9.5446119 2.3746778 6.3415197 10.9954067 10.1691029 10.3894683 10.3262367 1.7225972 5.5876800 12.7817616 11.9524591 10.3011178 9.1796979 0.2715900 0.2393800 -0.0875790 0.0625080 -0.3396400 0.2325900 -0.0146410 0.3715000 0.0741210 0.0741210 1.0403000 3.6569000 -0.0172540 0.2974000 0.0239870 0.0079175 -0.0718730 0.3841900 -0.4074900 -0.3473300 0.3339900 -0.3644200 -0.3644200 -0.3644200 0.0988510 1.8408000 -0.2458200 0.3186700 -0.0103700 -0.7111400 -0.3530500 -0.0750470 -0.3988600 -0.3353700 0.3135800 -0.3427400 -0.0146410 0.3713400 -0.0410240 0.2809400 0.5537200 -0.7962000 0.9904800 0.9904800 -0.0881090 -0.0881090 -0.3687300 -0.4201400 0.2875400 0.0239870 0.0079175 0.0079175 -0.0550950 -0.3668000 -0.3931900 -0.3396400 -0.3579500 -0.3671400 -0.3678200 -0.0817380 -0.3644200 -0.3644200 -0.1817800 0.0988510 -0.2251500 0.3106500 -0.0099565 -0.0433310 -0.0690640 0.443 -0.369 0.000 0.000 -0.334 -0.334 -0.340 -0.347 -0.368 0.000 0.000 -0.364 -0.364 -0.033 -0.161 0.000 0.000 0.345 0.345 0.311 0.311 0.000 0.000 0.516 -0.341 0.000 0.000 -0.340 -0.340 0.293 0.293 0.000 0.000 0.289 0.289 0.000 0.232 0.973 0.000 0.000 0.000 0.443 -0.369 0.000 0.000 -0.334 -0.334 -0.340 -0.347 -0.368 0.000 0.000 -0.364 -0.364 -0.033 -0.161 0.000 0.000 0.345 0.345 0.311 0.311 0.000 0.000 0.516 -0.341 0.000 0.000 -0.340 -0.340 0.293 0.293 0.000 0.000 0.289 0.289 0.000 0.232 0.973 0.000 0.000 0.000 8.11982666 5.54461212 5.34151971 9.97797620 11.17146406 6.26478036 10.02377985 9.46639648 8.08575659 5.12470861 12.96408280 12.34701023 2.37467784 NA 4.34152327 8.13200148 3.86944702 10.77284767 11.43783689 10.58059126 10.46840462 0.91525318 8.44273247 10.05224647 7.46600221 4.34152327 1.23719657 -1.08467032 10.93241180 4.58768302 6.67014351 8.56451155 9.62175135 9.52231749 10.49409975 3.55911243 9.12470887 -0.08467032 8.43095511 12.79579551 7.40710883 7.01854293 0.50019018 2.91525318 8.22131692 5.55911243 2.61569878 -0.08467032 5.51516681 4.32430658 2.91525318 11.15455555 5.27280705 10.22813830 10.54142065 10.15007283 4.37468480 10.00735180 12.95357427 9.18555067 5.23718510 3.55911243 10.12470874 1.50024118 10.61569510 NA 7.32039712 10.657565 10.105080 8.454414 11.745374 9.822897 11.375967 4.892537 11.689631 8.922283 9.849683 13.329809 12.702342 9.129575 7.948679 2.374678 7.034196 10.743392 10.769345 11.234081 5.709671 13.335608 9.375711 5.683441 8.756033 8.403096 9.848363 6.551880 6.349884 10.272257 10.475588 NA 10.321992 8.511445 10.266261 12.107086 10.096408 10.170874 8.107548 9.146477 8.283762 8.072602 10.852820 9.206426 10.317735 10.370069 11.837282 11.062460 10.021818 10.555048 9.239436 7.442732 9.804508 7.851157 10.499278 8.743392 10.084554 5.857770 10.933456 10.144074 6.676806 13.783306 10.997404 10.653348 12.551427 11.588123 4.845992 NA 9.288120 9.466964 9.169103 TCGA-BH-A1F8 89 1 763 NA breast stage iiib t4b n2 m0 female 1999 NA NA infiltrating ductal carcinoma 12 white not hispanic or latino NA NA 4 2 3 2 1 2 5 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.225215e-06 1.005712e-06 15.8730158730159 59.5238095238095 3.17460317460317 14.2857142857143 7.14285714285714 10.0182517 10.8722295 11.1130834 9.8872947 8.8842059 10.2983597 8.9724480 10.0422040 7.5032183 14.4565052 11.0481305 10.3723436 -1.7888632 12.3632609 3.5684456 7.0750833 6.0812608 8.1650929 6.2877124 12.7172663 4.5328219 13.3797647 2.2108875 9.0222715 11.2660097 5.9113369 -1.7888632 5.9388174 11.0077476 -0.7891125 7.1534112 7.9113363 -1.7888632 3.8547537 11.3573063 11.2388028 10.2759763 11.3396967 10.9298577 13.2580207 NA 11.7199295 13.5718467 7.0182514 8.6139088 11.1041983 12.2035696 3.5684456 3.6371581 9.7265966 11.6646818 NA 11.0008379 5.4203510 5.3401813 2.2108875 10.9464528 11.6304620 10.0996400 11.3049745 13.6531600 8.2675344 11.0824171 10.1233483 11.9874326 10.1545104 5.3298376 12.2017985 11.4533266 NA 10.0665440 9.6957197 1.9700438 4.9113369 10.7599594 10.5401325 10.0916282 10.6279581 4.2552892 9.2010008 13.2143268 11.3248017 10.2893812 8.5451699 0.0047233 0.0555200 -0.7491500 0.0410380 -0.7485600 0.0285610 0.0358100 0.0323840 3.6569000 -0.7664600 0.0383520 0.0516760 -0.7463800 -0.0310270 0.1086300 2.9431000 0.0320040 0.0320040 -0.7664600 -0.7645600 0.0406140 -0.7769300 0.0119620 0.0119620 -0.7358200 0.0051402 0.0000000 0.8223600 -0.7559000 -0.7559000 -0.0045653 -0.7491500 -0.7485600 -0.7411500 0.0285610 0.0285610 0.0358100 0.0323840 0.0724010 -0.7602000 0.0532240 -0.7820400 -0.7571900 -0.7571900 -0.7571900 -0.7571900 -0.7463800 -0.7592600 -0.0121580 -0.7208300 -0.7206600 -0.7082700 0.0320040 0.0320040 0.0320040 -0.7650100 -0.7645600 -0.7629500 0.0406140 -0.7469900 -0.7769300 0.0119620 -0.7586600 -0.7358200 0.0000000 0.7995700 0.0270800 -0.7550400 -0.7550400 -0.746 -0.746 -0.719 -0.719 0.000 0.000 0.000 -0.765 0.000 0.000 0.000 -0.777 0.000 -0.763 -0.763 -0.736 0.000 -0.756 0.000 0.822 0.822 0.000 -0.755 0.000 0.000 -0.749 0.000 -0.749 -0.749 0.000 0.000 0.000 0.000 -0.760 0.000 -0.782 -0.782 -0.757 -0.757 -0.611 -0.611 -0.746 -0.746 -0.719 -0.719 0.000 0.000 0.000 -0.765 0.000 0.000 0.000 -0.777 0.000 -0.763 -0.763 -0.736 0.000 -0.756 0.000 0.822 0.822 0.000 -0.755 0.000 0.000 -0.749 0.000 -0.749 -0.749 0.000 0.000 0.000 0.000 -0.760 0.000 -0.782 -0.782 -0.757 -0.757 -0.611 -0.611 8.6733992 7.7147222 4.2108953 8.5305690 11.2682117 5.9023606 9.7261039 7.9219445 8.6190568 NA 10.3745465 11.8627311 2.1177948 2.8547537 3.2552892 8.3337247 2.8547537 11.1732506 11.2763129 11.0935398 9.1132718 -0.2040669 7.6117766 9.2235213 5.5328250 8.2580209 4.9388174 NA 10.7062522 4.7344603 6.4154680 8.6371614 4.7958604 8.5260465 10.1853114 3.8256025 7.3657153 NA 7.0406196 11.4062690 7.3194210 5.4776838 NA 7.1679991 8.9599281 6.9078641 3.2552892 NA 5.0182514 5.5267700 1.0182781 10.4573405 -0.7891125 6.7807523 10.6863769 10.7592371 4.6032168 9.7037513 14.7931270 7.5794034 2.5328156 1.7958500 11.1768614 -0.2040669 NA 0.2108875 -0.2040669 13.310980 7.786436 8.359374 12.363261 9.103440 11.292380 12.717266 10.348849 11.150109 11.195849 12.744105 9.820537 9.726597 8.390806 NA 8.368244 11.808600 9.5457286 10.3729733 8.5717439 13.4675839 9.0719836 5.1416331 7.9506772 9.7721847 9.5618746 3.2552892 8.0673225 11.0481305 6.7344590 2.6703192 10.7606814 3.3401777 6.9418082 9.7821754 9.1334811 10.2742918 7.6703284 7.0965929 12.8254341 5.9043829 12.1809128 10.2759763 10.4424180 9.2242195 12.4801696 7.7807523 11.0128072 10.1885345 9.2823592 4.4203477 8.2917541 7.5914229 11.6646818 6.2498151 11.0008379 8.0981174 9.5913578 10.9464528 6.7920979 12.1811825 10.3363103 10.7236372 12.9593517 8.7147226 0.5328655 1.2108875 10.6173675 9.8784519 8.8145232 TCGA-BH-A1FB 60 1 3669 NA breast stage iib t2 n1b m0 female 2000 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 3 4 3 3 4 4 3 3 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.0299698 10.3497903 11.7481830 10.3799746 8.3799748 9.3989162 10.0307797 10.0408642 10.1018628 12.9853938 10.6957886 10.6002773 1.8164768 12.3857624 4.5534281 10.1611263 5.5443803 9.3678485 10.0157239 12.3523839 4.5168976 12.6487572 6.8897096 9.4266858 10.8383659 6.7511343 NA 11.5426688 9.0722760 2.5534342 8.4026749 8.1458832 0.2315553 5.7783926 10.2517836 10.3923150 10.2037600 11.4356106 10.4838679 11.9420893 9.8906020 11.2258515 14.6664357 8.3079530 9.4530852 12.0070055 11.6610355 5.3400210 3.4014257 9.8603992 12.5908358 -1.7685676 11.5764874 6.4935929 8.0754192 5.4311716 10.5846449 11.7594637 10.1436389 12.4673627 13.0655246 7.6021852 11.2493504 10.9949469 11.5867115 11.4216314 5.4311716 12.0515773 11.8406768 -1.7685676 10.3403492 9.7303472 3.5461907 6.2704168 10.8091629 10.6561892 10.1022480 10.5959063 4.2315015 8.5215168 13.8093104 13.2616910 9.9210593 9.2948932 0.00194180 -0.00235530 0.00291330 0.00041593 0.00000000 -0.02288100 0.00000000 0.00000000 -0.19149000 0.34177000 0.34177000 0.00097064 0.00097064 -0.00563480 -0.00563480 -0.00563480 -0.00290910 -0.00290910 -0.00415460 -0.00013862 0.00833510 -0.01106000 0.00416320 0.00416320 -0.00622860 -0.00622860 -0.00622860 -0.00470790 -0.00512270 0.00194180 0.00527490 0.00291330 -0.00678830 0.00000000 -0.03142200 -0.03142200 0.00000000 0.00000000 -0.00215160 -0.00401620 -0.00401620 -0.19149000 0.00432360 0.00432360 0.00432360 0.00471900 0.00097064 0.00097064 -0.00563480 -0.00563480 -0.00563480 -0.00290910 -0.00290910 -0.00290910 -0.00290910 -0.00415460 -0.00013862 -0.00013862 0.00833510 -0.18169000 -0.01106000 0.00416320 -0.00041585 -0.00622860 -0.00622860 -0.00470790 0.00097064 0.00166420 0.00166420 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.353 0.171 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.342 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.353 0.171 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.150 0.342 0.000 0.000 0.000 0.000 8.0356289 0.5534588 4.5890504 9.9988550 11.3285425 6.6546561 10.5432464 9.8353748 8.4586207 4.6065370 11.6493506 10.8891894 2.5534342 2.7550585 4.8897072 8.8220851 4.5168976 11.2690450 11.3652824 10.3212795 9.1886000 5.8535491 7.7550598 10.2810063 8.0307797 5.6827081 1.0388576 0.5534588 11.3552961 6.7589747 7.8590322 8.3465417 9.3069772 9.8743711 10.1406411 6.5802269 7.9796910 -1.7685676 8.5978202 12.9939320 8.6195154 6.6323773 -1.7685676 4.6909311 8.3176342 -0.7685676 4.0128547 2.8164564 7.6556645 5.8264188 5.5261189 10.1983640 -0.1836051 10.3076456 10.4433864 9.6281028 6.0956840 10.2434242 13.5728779 9.5324226 3.9039252 5.1141421 11.2075251 2.2314939 NA -1.7685676 2.4794375 12.216003 4.831411 9.005461 12.385762 10.534217 10.125558 12.352384 12.075419 9.335441 11.348329 13.554201 11.217340 9.860399 8.322934 -1.768568 7.743250 11.155011 11.242900 11.603139 7.098776 13.717137 9.372328 8.330846 9.105711 8.192948 10.372075 8.200165 7.668210 10.695789 6.431170 6.360780 11.399543 6.812698 6.745423 12.553215 10.777910 10.499163 8.841600 7.849884 12.114237 8.410163 11.440548 10.203760 10.524107 9.606538 11.825239 10.183875 10.858576 10.531565 9.674442 6.842523 9.465238 8.286129 12.590836 7.831411 11.576487 8.203042 10.944240 10.584645 7.371049 14.054641 9.988888 10.602458 13.314146 10.306977 6.493593 2.232384 10.903923 10.736069 9.917561 TCGA-BH-A1FC 78 1 3472 NA breast stage iia t1c n1b m0 female 1998 NA NA medullary carcinoma 1 black or african american not hispanic or latino NA NA 5 4 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.907385e-06 3.81477e-07 17.910447761194 32.8358208955224 2.98507462686567 25.3731343283582 20.8955223880597 11.1043968 9.4155265 12.4007664 9.6533755 8.8048512 8.5157665 8.2983907 9.6143742 11.2479694 12.0908376 10.5073339 10.5614252 2.2349917 10.8190187 2.7585590 9.4888431 7.3037744 9.2293493 9.0261588 5.1418864 NA 7.0358955 8.7288511 9.2321753 11.1549764 5.9898838 2.6273033 11.8498206 11.8047327 0.5568953 11.2199482 6.6358748 2.5569198 7.5227078 9.2328809 10.6248960 9.7953286 10.9988306 9.2243903 10.7746392 -0.1800049 10.2000585 14.2396332 8.6727895 7.8086431 12.0495782 10.7064169 3.4829257 -1.7651308 9.3057875 9.6969866 NA 10.5552322 4.2122736 7.5837237 6.3847423 8.3264313 12.3605707 10.6698846 11.0655110 12.4221932 5.1418864 11.6168091 11.2855332 11.5484457 11.6401372 5.4149034 12.1626811 9.6959635 -1.7651308 9.9140360 11.1396304 2.3250122 5.8423252 8.8761443 9.2058206 11.2911254 10.5784591 2.6273033 4.7427877 12.7455127 11.3909207 10.4962092 8.6024105 1.880100 1.303300 0.164900 0.134650 0.213300 -0.519180 0.782230 -0.200000 1.002200 1.002200 1.460300 1.491600 -0.178730 -0.529810 0.195880 0.195880 0.174680 0.153140 -0.511660 -0.183330 -0.530430 2.550100 0.144880 0.586320 0.848690 1.116400 0.089996 -0.158350 1.471800 -0.210940 -0.175750 0.163700 0.350390 0.270480 -0.213860 -0.225520 0.903510 -0.200000 -0.187730 -0.069198 0.144440 -0.954570 0.871290 0.871290 0.871290 1.150600 -0.165610 -0.147470 -0.529810 0.195880 -0.539660 -0.539660 0.155020 0.153140 0.302980 -0.879300 -0.172650 -0.189650 -0.522460 -0.525320 0.131010 0.144880 0.013353 -0.552360 -0.244720 -0.545990 0.538370 -0.539970 -0.539970 0.618 -0.176 -0.334 0.196 0.145 0.145 -0.512 -0.176 -0.522 -0.521 -0.521 0.145 0.145 1.702 0.000 0.000 0.000 -0.182 -0.182 -0.158 -0.158 0.538 -0.540 0.312 -0.183 0.137 0.137 0.000 0.213 -0.223 -0.223 0.552 -0.200 0.000 0.000 0.463 1.002 0.871 0.871 0.038 0.235 0.618 -0.176 -0.334 0.196 0.145 0.145 -0.512 -0.176 -0.522 -0.521 -0.521 0.145 0.145 1.702 0.000 0.000 0.000 -0.182 -0.182 -0.158 -0.158 0.538 -0.540 0.312 -0.183 0.137 0.137 0.000 0.213 -0.223 -0.223 0.552 -0.200 0.000 0.000 0.463 1.002 0.871 0.871 0.038 0.235 7.5524086 NA 5.8199593 10.2268719 11.3875975 6.6150675 10.8022389 9.1413602 7.9037210 NA 11.7818902 10.6649255 3.6273150 NA 1.9354220 10.2817787 3.8788528 10.4532562 11.4937090 11.7283509 9.4888431 1.5569444 10.3948670 10.5128643 8.4900241 -1.7651308 NA -1.7651308 10.0851826 3.9898838 5.8274532 8.9857028 5.7107293 9.6855162 11.6026835 2.9354409 9.9016635 NA 7.1478846 12.1162053 7.8679910 6.4829225 NA 4.8788528 7.1568365 2.4049304 3.8788528 -1.7651308 7.5770708 2.5569198 5.8124238 11.9550262 4.7107293 9.5507114 11.1001490 10.4653165 6.4876616 10.0126620 13.9332121 8.5099563 5.6612593 4.6443870 10.3101406 1.6944345 -0.1800049 2.1418905 7.1237386 11.342440 8.850625 8.518084 10.819019 9.577626 12.162218 5.141886 10.303774 9.157580 10.765158 14.894128 14.023663 9.305787 8.370705 3.092969 8.186281 11.584830 12.0404373 11.1864626 6.8274532 12.7297882 8.3796539 7.9848650 9.2448243 9.4011588 11.6752719 7.3898137 6.5064591 10.5073339 10.6345407 0.5568953 10.5831706 2.8199542 9.8833309 12.2498880 12.3471094 10.3735875 8.9206205 8.3224586 7.6165386 9.7962837 10.5655093 9.7953286 10.3885478 10.2090518 11.8322336 12.6792989 10.2289955 11.4265177 8.3077983 NA 8.9921107 6.7188109 9.6969866 10.1516217 10.5552322 6.4734005 12.2528098 8.3264313 8.4674168 14.3588343 11.8843642 9.8062744 13.1803939 11.0415454 4.4829257 2.5569198 10.1362398 9.1538590 10.0527789 TCGA-BH-A1FD 68 1 1009 NA breast stage i t1c n0 m0 female 1998 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 2 1 2 4 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.548757e-07 1.733986e-07 33.3333333333333 4.76190476190476 9.52380952380952 14.2857142857143 38.0952380952381 10.5028180 9.8549371 11.9718386 10.1669815 7.9523324 8.7707461 10.2022147 9.6103097 8.8742360 12.2596586 11.0859530 10.2933916 2.6065607 10.7637843 2.3017047 8.4466611 6.2310483 8.0070306 8.5054110 12.5852681 -0.7858752 12.9262835 6.3639875 9.4460794 11.3297716 8.1986587 2.3017047 10.6654513 9.8404055 0.2142492 9.0487114 6.5805631 NA 3.3841604 10.5965941 11.2315706 9.5734408 10.1064035 10.6212424 12.1231957 0.7991702 10.8234190 14.1459934 7.2077162 10.8259567 11.0691086 10.1181221 3.7378057 5.9691275 9.1203792 10.9550750 -0.7858752 11.5909083 6.3331822 6.3383620 5.5805616 10.0726098 11.6538114 10.3204760 12.3893219 13.2980519 7.3227646 10.8888739 10.3950973 11.5133051 10.8569689 5.3017047 11.7229016 11.0609059 1.0216219 10.4606839 10.9425859 2.6072474 6.2421471 11.1455318 10.1364529 11.5451571 10.3221111 6.7649870 9.6823551 12.1838965 11.4729535 10.0419798 8.8553890 0.6367200 -0.7904700 0.0841270 0.0000000 0.0061690 0.0330460 0.0285420 -0.7874300 3.6569000 0.8555000 3.6569000 0.1457700 -0.0944030 0.0432180 0.0432180 0.0432180 -0.0227590 0.0088128 -0.7797800 0.0503120 0.2041800 -0.7436500 -0.7728200 0.0432180 -0.0443570 -0.0443570 1.4370000 0.0128550 -0.7823200 0.0507380 0.1874400 0.0841270 0.0195630 -0.7735000 -0.7974100 0.0164860 -0.0081028 -0.7874300 -0.1786100 -0.1342700 -0.0248760 -0.6635200 0.0199830 0.0199830 -0.7689900 -0.7689900 -0.0944030 -0.0944030 0.0467620 0.0432180 -0.6661700 -0.6259400 -0.0227590 0.7710700 0.7398100 -0.1934400 -0.7716300 -0.7716300 0.0129940 -0.7532800 -0.7841700 -0.7728200 -0.0744870 -0.0443570 -0.0443570 -0.8067700 0.0271360 -0.5931700 -0.5931700 0.000 0.000 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.753 -0.753 -0.784 -0.784 -0.636 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 -0.774 -0.774 0.000 0.000 0.000 0.000 0.754 0.000 -0.573 -0.573 0.000 -0.769 -0.181 -0.345 0.000 0.000 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.753 -0.753 -0.784 -0.784 -0.636 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 -0.774 -0.774 0.000 0.000 0.000 0.000 0.754 0.000 -0.573 -0.573 0.000 -0.769 -0.181 -0.345 8.7611347 0.2142492 4.0722173 10.0195810 11.4171293 6.3218758 11.3391693 8.8098241 7.5912336 -1.7858752 13.1462242 11.2288745 3.8866672 NA 3.7992013 8.4418561 3.3841604 10.8959179 11.7854003 11.0759088 8.5259886 2.9146793 8.2366079 9.1979465 4.9146793 4.0471283 2.3017047 NA 11.0163526 7.7878875 7.1390530 9.5384208 3.8866672 9.5654279 10.7262399 3.3841604 8.4163639 NA 6.8435970 12.4137592 8.1241332 6.4382413 NA 7.1151071 8.1345932 1.6736921 1.9146793 NA 3.6065607 2.8046112 -1.7858752 11.8190251 -0.7858752 5.7060940 11.0393978 10.7264868 4.0722173 9.5822009 13.5124102 7.2910556 1.5361524 3.7992013 10.7080957 2.7377949 -1.7858752 1.0216219 2.0215863 13.421947 6.418811 8.508861 10.763784 9.737802 9.785045 12.585268 11.813107 9.326680 11.216000 13.432993 11.944073 9.120379 7.239380 1.536152 7.153820 11.845076 10.1961643 11.1902672 7.4454610 13.9615930 9.9133788 4.1449763 9.6336737 8.3766316 9.0516160 6.3435233 4.6899756 11.0859530 8.0799732 6.6571841 10.5350408 7.3096373 7.7776847 10.2373015 9.4460614 10.4400501 7.7259926 8.9824247 13.3219886 4.0215952 12.3318200 9.5734408 10.0324230 10.0884532 11.0238074 8.7407394 11.1075417 10.0017347 9.1857838 5.3537926 8.5286080 7.4532896 10.9550750 2.9146793 11.5909083 8.0232043 9.7856184 10.0726098 7.9319164 13.8911615 10.0834485 10.2435275 12.3274940 10.2678267 -0.7858752 -0.7858752 10.8589978 10.0880688 8.6869312 TCGA-BH-A1FE 31 1 2273 NA breast stage iib t2 n1 m0 female 1998 NA NA infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 4 3 4 3 3 4 4 3 4 3 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.121176e-07 3.467973e-08 20 10 0 30 40 10.9817247 10.5329900 12.1906587 10.3444230 8.1762899 9.9007086 9.6995017 10.1378341 9.7060297 13.6428783 10.7355016 10.6988004 1.5669612 12.8179416 4.3929150 8.9747906 6.0617071 8.8839449 8.3589944 12.4327470 0.9148706 13.5662068 4.0617071 8.8481359 11.3400826 5.2470616 0.1075540 8.2559883 10.0732961 4.2774343 10.0400957 8.1159405 -0.8924460 4.8079525 10.6103436 10.7233714 9.8096845 11.9317745 10.2852428 12.2281547 11.5538198 10.1061023 14.7125862 8.9339650 9.7226817 11.7126441 11.9969207 4.6310752 4.1949774 9.9019278 11.9469125 -0.8924460 11.5919571 6.6466710 7.8557045 4.5337751 10.4220950 11.7537330 9.6702312 12.5920830 13.1539964 7.5316778 11.3306085 10.6917862 11.6655738 11.4408069 5.6388934 12.2933939 11.9069958 0.1075540 9.8888715 9.6118343 2.6936765 6.4473626 10.7261268 10.1025723 10.1597402 10.4420644 4.0847956 8.8937814 13.4551678 12.7489427 10.3426285 8.9530018 -0.1458100 0.0084743 -0.0679930 -0.0679930 0.0000000 -0.1634500 0.7047600 3.5828000 -0.1705600 -0.1637000 2.1159000 0.0252500 0.0111210 0.0158660 -0.0290770 -0.0290770 0.0192230 0.0192230 -0.3934100 -0.0790770 -0.0487480 -0.3883900 0.0171240 0.0171240 -0.1380700 -0.1380700 -0.0914200 0.7742500 -0.1541400 -0.1458100 0.0102850 -0.0679930 -0.0240600 0.0000000 -0.2072200 -0.2072200 0.0334080 0.2373600 -0.1411600 0.0066653 0.0066653 -0.1349700 -0.0746780 -0.0746780 -0.3489300 -0.0026322 0.0111210 0.0111210 0.0158660 -0.0290770 -0.1875800 -0.1875800 0.0192230 0.0192230 0.0192230 -0.3877200 -0.2627600 -0.3806700 -0.0487480 -0.3765100 -0.3883900 0.0171240 0.0043021 0.1411700 -0.0914200 0.0210450 0.0304510 0.0318590 0.0318590 0.000 0.000 0.000 0.000 0.000 0.000 -0.344 -0.319 0.000 0.000 -0.377 -0.388 0.000 0.000 0.000 0.000 0.000 -0.146 -0.146 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 -0.174 -0.174 0.000 0.000 0.270 0.270 0.000 -0.285 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.344 -0.319 0.000 0.000 -0.377 -0.388 0.000 0.000 0.000 0.000 0.000 -0.146 -0.146 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 -0.174 -0.174 0.000 0.000 0.270 0.270 0.000 -0.285 0.000 0.000 7.5852698 3.9901562 5.0263752 9.8079515 11.3319658 5.1718793 9.6587394 10.3157523 8.0750694 5.0144044 11.3718078 11.6772013 2.0143910 1.6924718 4.1519075 8.7781682 3.6924718 10.9840288 11.6832874 10.6924744 9.3423292 1.5669612 7.9962548 9.6058625 8.0023295 4.9404017 2.0143910 -1.8927139 10.7623716 6.3120824 7.8855890 8.6466707 7.1709065 9.0305347 10.2973363 4.2774343 7.8337301 -0.3075728 8.0113939 12.8738337 7.4628630 6.6153059 -1.8927139 6.0790559 8.2886640 1.2774492 2.7513780 6.5628392 7.7423229 4.7989059 4.4650668 10.3557359 1.4294285 9.8243313 10.4387087 9.9674348 5.5337751 10.5329900 13.6752897 9.5551117 4.8888699 4.8888699 10.8754894 0.4294285 NA 1.1074870 0.1075540 12.303759 6.499830 8.925295 12.817942 9.728190 10.364310 12.432747 11.656093 9.437308 11.363721 13.521503 11.350090 9.901928 9.527998 NA 7.331514 12.315899 11.385671 10.807518 6.769290 13.153483 9.069685 7.938819 9.501439 9.944351 10.473987 7.619265 7.247064 10.735502 4.821756 5.533775 10.745721 6.478198 7.729912 12.323424 10.749564 10.079055 8.577153 6.821757 12.182489 7.840527 13.092956 9.809685 10.675706 9.901521 11.326226 9.310248 10.990155 10.953198 9.548900 8.027865 8.523486 8.761584 11.946912 7.988626 11.591957 8.145059 11.064654 10.422095 7.644730 13.695699 10.109624 10.354549 13.091797 11.258052 7.364900 1.914871 10.777283 10.398395 9.800127 TCGA-BH-A1FG 88 1 3736 NA breast stage i t1c nx m0 female 1998 NA NA infiltrating ductal carcinoma NA white not hispanic or latino NA NA 3 5 2 2 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.387189e-07 31.25 12.5 0 25 31.25 10.4302698 9.6006600 10.9845751 8.7965160 9.6459561 9.3322020 10.0764848 9.0264842 9.4014265 14.0457177 11.3405325 10.4682228 2.1276333 12.8043960 1.8646121 9.9799003 6.6459567 8.0365237 10.1049108 13.2537438 2.7125958 14.0703595 2.1276333 9.4397499 11.3692169 7.9435481 0.1276333 7.7834599 8.7435671 0.1276333 7.1163159 6.6667893 NA 2.5426790 9.7349612 9.8303807 9.7762881 11.1476849 9.7953338 10.8088693 0.1276333 12.6962996 13.7499878 6.7001165 9.1285697 10.5174415 11.1899019 2.4495614 4.9002196 8.9187938 11.2261016 -1.4571972 10.8112103 4.3240257 4.5426667 3.4968586 10.5402007 11.6944777 10.0866669 11.9972247 12.7147052 7.8913967 10.8152982 10.6799798 11.4605998 10.2296065 4.2150961 12.5189640 11.6057263 1.7125958 10.1425812 9.8510074 1.7691793 4.5870649 10.1346581 10.4168813 10.6151360 11.3940270 1.3500446 8.8969178 12.5476788 11.4072415 9.7435670 8.8836312 -0.00567570 -0.00567570 0.00000000 0.00000000 -0.00761010 -0.00346270 -0.00443120 -0.04793600 -0.90449000 2.94200000 2.91690000 0.02132300 0.00973700 -0.00304750 -0.00083160 -0.00083160 0.01279500 0.00097064 -0.00567570 -0.05671200 0.02146300 0.86572000 0.86572000 0.86572000 0.01433000 0.01433000 0.01433000 0.00069327 0.00777830 -0.00567570 0.00094510 0.00000000 -0.00761010 -0.00830050 -0.91029000 -0.00567570 -0.00443120 -0.04793600 -0.04793600 0.00221930 -0.00761010 -0.90449000 0.00263570 0.00263570 0.00263570 0.00684550 0.00973700 0.00973700 -0.00304750 -0.00083160 -0.00083160 -0.00083160 -0.30545000 0.00097064 0.00097064 -0.00567570 -0.05671200 -0.05671200 0.01642200 -0.91795000 -0.88031000 0.86572000 0.08782400 0.01433000 0.01433000 0.00069327 0.01363200 0.01796300 0.02820000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.023 -0.882 -0.015 0.866 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.233 1.137 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.023 -0.882 -0.015 0.866 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.233 1.137 0.000 0.000 0.000 0.000 9.2168605 -0.4573952 3.5426667 10.0982161 11.5538956 7.4340569 10.9032411 7.2915990 9.2748359 5.9435487 11.1269263 11.1499733 3.1276333 5.4253116 1.5426543 6.8047635 2.7125958 10.2883426 11.7885181 10.3983155 9.9871656 1.1276333 7.0934155 10.2573432 5.2569125 4.6511952 1.1276333 NA 10.5938774 5.5650366 5.2841365 7.7275434 7.6194842 10.2341414 9.7263038 2.5426790 7.4525617 NA 7.1276312 12.2623780 7.7200876 7.0061925 NA 6.5026695 8.5228079 7.0184016 3.9002196 -0.4573952 4.4968650 6.3193650 0.1276333 9.9231294 NA 7.5979505 10.4844496 9.8492997 4.4968650 9.7182179 12.6705015 7.5170827 1.8646121 2.4495614 13.7293243 -1.4571972 -1.4571972 1.8646121 NA 13.314419 4.297558 9.267182 12.804396 10.243975 10.498318 13.253744 12.314261 9.320746 10.403367 12.132671 9.674525 8.918794 8.783460 -1.457197 7.878059 12.009255 10.308369 11.487197 7.975210 13.041826 9.496137 4.449561 8.898019 8.458548 9.826764 4.496865 7.692415 11.340533 5.018403 -1.457197 10.252614 3.350016 7.519490 9.599983 9.841876 11.131149 10.928531 8.239636 10.529222 4.350023 11.774780 9.776288 10.909264 10.223467 13.297504 9.317455 10.797107 10.170202 9.307540 -1.457197 8.821013 4.952059 11.226102 4.752122 10.811210 4.671950 10.078430 10.540201 6.908991 13.452327 10.921505 11.110149 13.104970 9.534190 1.127633 NA 10.910356 10.217743 9.092453 TCGA-BH-A1FH 47 1 1034 NA breast stage iv t2 n1b m1 female 1998 NA NA infiltrating ductal carcinoma 8 white not hispanic or latino NA NA 4 5 5 3 3 3 4 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-08 6.935946e-08 0 66.6666666666667 0 33.3333333333333 0 10.9463344 10.5177262 11.7879789 10.2470544 8.0617940 8.7577260 10.5633109 10.2844255 10.3810451 13.2648629 10.6631024 10.7979238 4.9667904 11.8456745 3.5939752 9.6134992 7.1127085 9.1673356 9.7639047 11.7754187 3.7348397 12.5691295 6.7222051 9.1776854 10.3382098 5.7597897 -1.6915226 8.6965948 9.0874761 4.9667904 8.1727635 8.1509277 0.8935175 4.9810032 10.2894312 10.8893071 9.8545072 10.6392143 10.1283575 11.8893072 10.7825368 9.9889370 15.0989642 8.7641205 10.2162194 11.4519607 11.4090756 6.4275190 5.1912191 9.9383895 12.6161341 -1.6915226 11.4430038 5.4785027 5.9667881 5.7348424 10.6206096 11.6917418 10.2389453 12.6637909 12.8194035 8.0634652 11.3293839 11.1446851 11.4873980 11.5250202 5.3746674 11.8203302 11.2242702 2.9524268 10.2740010 9.3652153 5.2642850 5.4785027 10.3440639 10.0167992 10.1688886 10.0016287 5.1665588 9.6242932 13.2570360 12.6432000 9.8940095 9.8674764 0.01656500 0.01656500 -0.06852900 -0.06852900 0.02918400 -0.02301800 0.02384700 0.02384700 0.88246000 0.00000000 0.00000000 0.00847430 -0.10605000 -0.06100000 -0.06100000 -0.06100000 0.01371400 0.02234600 -0.16052000 -0.09459200 0.23395000 -0.17740000 -0.16815000 1.28320000 -0.00526100 -0.00526100 -0.00526100 -0.03771500 0.01656500 0.01656500 -0.08983100 -0.06852900 0.02918400 0.02918400 -0.02301800 -0.07761100 0.02384700 0.02384700 0.02384700 0.02230400 0.01363200 -0.17525000 -0.04590600 -0.04590600 -0.04590600 -0.04590600 -0.10605000 -0.20747000 -0.16815000 -0.06100000 0.01712400 0.01712400 0.01371400 0.02234600 0.00051404 -0.16052000 -0.09459200 -0.09459200 -0.18609000 0.00763920 -0.17740000 -0.16815000 0.02370600 -0.00526100 -0.00526100 0.49718000 0.01684500 -0.00041585 -0.00041585 -0.106 -0.106 0.000 0.000 0.000 0.000 -0.161 0.000 0.234 0.000 0.000 -0.158 -0.158 0.000 0.000 0.000 0.000 0.000 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.175 0.000 0.000 0.000 0.000 0.000 -0.106 -0.106 0.000 0.000 0.000 0.000 -0.161 0.000 0.234 0.000 0.000 -0.158 -0.158 0.000 0.000 0.000 0.000 0.000 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.175 0.000 0.000 0.000 0.000 0.000 8.1540677 7.7680089 6.0432876 10.3750031 11.8704621 6.2417372 10.4621295 10.2979827 8.1258649 5.9880575 11.3635209 11.3332255 3.8004340 5.9524338 4.9084911 8.5337849 3.3960362 10.4662403 11.5825187 10.3933858 8.5517513 3.1159321 8.0734491 9.9792338 7.2363558 6.6259908 -1.6915226 -0.6915226 11.0290355 7.5517513 8.5445916 8.2466869 7.3719726 9.7383190 10.2645906 5.5277460 7.7348424 0.8935175 9.0964801 12.9211581 8.3420004 7.5421969 NA 5.0090157 8.0364978 -0.1064048 4.6484252 -0.1064048 4.6661317 4.5585921 3.3529703 9.7390300 0.3085939 10.4249215 10.3709610 9.8173626 6.0364989 9.8321395 12.2054775 9.7110567 1.6304987 4.1912231 10.8041827 1.1159654 NA 0.3085939 2.6304987 12.008738 5.050045 8.708389 11.845675 10.184327 10.054672 11.775419 12.589711 9.193511 11.334928 13.287109 10.713453 9.938389 8.010750 -1.691523 8.591666 11.158374 11.837032 12.146008 6.893541 13.729194 9.355701 7.015937 8.723263 7.342001 10.378568 6.448130 8.311392 10.663102 6.070130 6.070130 12.010425 6.141468 5.522702 12.990859 10.416775 10.791889 8.219970 8.389395 11.968350 6.751521 11.116518 9.854507 10.159936 9.365892 11.378363 10.521074 10.868671 10.584702 9.670521 2.009025 9.324529 8.733710 12.616134 7.865084 11.443004 9.497166 11.301916 10.620610 7.495929 13.834985 10.096480 10.577704 12.744378 10.528956 2.893537 8.298682 10.774399 10.517117 10.065968 TCGA-BH-A1FJ 66 1 1927 NA breast stage iiia t3 n1b m0 female 1998 NA NA infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 1 1 2 2 4 1 5 4 NA NA 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.774378e-07 32 12 4 40 12 10.9823104 9.9136118 12.0708367 9.6306168 8.8910020 9.1907176 10.6194070 10.1734477 9.0523385 13.8419065 10.1870100 11.2894226 0.9326659 12.5315064 3.9581931 7.9723589 5.2442439 8.2377410 11.1861662 13.5367793 2.4472353 14.4177309 6.0794976 9.7423096 10.9840594 8.8135516 2.3732306 6.6798896 9.7812792 0.4472089 7.4336405 8.5857573 NA 3.9832855 10.2952264 11.1184167 11.0858464 12.1477559 9.7088544 11.5716093 -1.8746134 11.4316479 14.5260308 9.0685488 9.6596042 11.5573212 11.9538346 4.3347542 7.0321923 8.1011495 11.0050761 0.4472089 11.5345597 3.7400101 3.6488681 4.7977290 10.4883410 12.1118545 10.3148172 12.6920690 13.2751676 8.0982811 11.2499074 11.0231790 12.2317007 11.2124327 4.9832809 12.8532750 12.6735814 -1.8746134 9.7709598 9.2468349 2.5860441 4.3732306 11.2597277 10.0449096 10.3377977 9.8984406 1.7102609 9.7723100 12.5757394 11.8179169 10.0842166 9.2127641 2.5645000 2.5956000 0.0072989 0.0240650 0.0384260 -0.0098799 0.0010476 -0.9494400 0.0086908 0.0086908 0.0086908 -0.0182370 -0.0020015 -0.0081317 -0.0081317 -0.0081317 0.0000000 0.0045182 -1.0071000 -0.0091901 -0.0355090 0.2077200 0.2077200 0.2077200 -0.1165200 -0.0926690 -0.0926690 -0.0423060 -0.0404050 0.0103620 -0.0505790 -0.0235510 -0.0701380 0.0384260 0.0193000 0.0193000 0.0010476 -0.9494400 0.0047961 0.0089693 -0.0100490 0.0086908 -0.0163530 -0.0163530 -0.0163530 -0.0163530 -0.0020015 -0.0020015 -0.0225940 -0.0081317 -0.0081317 -0.0081317 0.0000000 0.0045182 -0.0617350 -0.9386100 -0.0091901 -0.0091901 -0.0355090 -0.0410840 -0.3560600 0.2077200 0.0152450 -0.1165200 -0.0926690 -0.0423060 0.0047961 -0.0747370 -0.0735360 0.000 0.000 0.000 0.000 0.000 0.000 -0.939 0.000 0.000 0.000 0.000 -0.148 0.208 0.000 0.000 0.000 0.000 2.564 2.564 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.949 -0.949 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.939 0.000 0.000 0.000 0.000 -0.148 0.208 0.000 0.000 0.000 0.000 2.564 2.564 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.949 -0.949 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7555686 NA 3.8801859 9.8655038 10.7535190 8.2688376 11.6268898 7.8047815 8.2251356 NA 11.5911228 11.2970364 5.8600118 3.7102609 3.1697006 8.2507148 2.0322067 9.8179169 11.5297777 11.9315489 9.7812792 5.7326328 8.2390438 9.6750860 5.9390831 1.1253205 6.2127639 NA 11.0564082 7.6030595 6.2285898 8.0678156 4.8801908 9.7242843 11.2981976 3.7977290 8.9140197 NA 8.3505087 12.4477225 8.6998948 7.1421101 NA -0.8746134 9.4381843 5.4828547 3.0794976 -1.8746134 2.1252874 3.3849478 0.1252543 10.1000745 -0.2896509 6.3873970 10.6045764 9.8692942 5.4014257 9.4718152 12.7242843 6.5431540 3.3347542 3.5515652 11.0613872 2.7102609 NA 4.5515652 NA 12.569359 6.358922 8.660577 12.531506 9.859088 11.739896 13.536779 11.417335 9.387983 10.996822 13.703409 8.897616 8.101149 10.038191 2.584722 7.344470 11.972555 10.787747 11.737248 8.112565 13.921290 9.336581 2.125287 8.932656 10.240582 10.148127 4.740010 7.725214 10.187010 6.113986 -1.874613 10.739091 9.539458 8.424257 12.125125 7.738170 11.405637 7.241646 7.842978 13.805716 2.373231 10.688116 11.085846 10.381510 10.116823 11.305521 9.158036 10.427083 10.792856 9.843406 1.825745 9.208182 7.822269 11.005076 2.648857 11.534560 6.500342 10.445007 10.488341 7.664460 13.180118 10.537607 10.643217 12.535355 10.580629 NA -1.874613 10.651556 11.084579 9.389744 TCGA-BH-A1FL 69 1 1673 NA breast stage iib t2 n1b m0 female 1998 NA NA infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 3 1 4 3 4 4 5 6 4 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 26.3157894736842 5.26315789473684 5.26315789473684 26.3157894736842 36.8421052631579 10.648168 10.083875 12.573590 9.269120 8.557475 9.578070 11.192384 9.276070 8.566779 8.708025 11.461112 10.589274 0.922959 13.110805 2.700528 8.552280 6.414777 8.506812 10.623115 13.521906 1.437494 14.400374 5.507887 9.817225 11.593200 5.615413 -1.884168 11.529725 9.271651 1.575022 8.016435 6.938935 NA 3.922921 10.221804 10.144165 10.013414 12.100610 10.529989 11.395324 2.870463 12.518181 13.719368 7.905851 10.095708 11.849960 11.163033 4.961058 5.081352 9.043346 10.687321 NA 10.793068 4.787991 4.843486 3.787997 10.230937 12.280868 11.202865 12.666135 13.086707 8.708959 11.027709 10.813344 11.430293 11.451796 5.575001 13.185102 12.822334 NA 10.187030 9.206342 4.807659 4.591302 11.352031 10.157912 10.382940 9.971604 1.816026 9.411337 14.324126 12.592884 10.726593 10.001264 1.33780000 1.35290000 -0.00954260 -0.00954260 -0.00373950 -0.00470790 -0.00055444 -0.00713180 0.00000000 0.00000000 0.00000000 0.00857190 0.00541390 0.00300870 0.00300870 0.00300870 -0.00408000 -0.00408000 -0.00138580 0.00666530 0.02811300 0.02777800 0.00366540 0.00027728 0.00610900 0.00610900 0.00610900 0.02272500 0.01279500 -0.00664320 0.00122450 -0.00954260 0.01419000 -0.00995650 -0.00470790 -0.00470790 -0.00055444 -0.00713180 -0.00713180 0.00527490 -0.00761010 0.00000000 0.01187200 0.01187200 0.01187200 0.00861350 0.00541390 0.01880300 0.00300870 0.00300870 0.01572700 0.01202500 -0.00408000 -0.00408000 -0.00408000 -0.00830050 0.00666530 0.00666530 0.02104300 -0.76775000 0.02777800 0.00366540 0.01502800 0.00610900 0.00610900 0.02272500 0.01335300 -0.75659000 -0.77353000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.009 -0.768 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.692 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.009 -0.768 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.692 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5460209 -0.2993827 5.4374974 10.5882590 10.9363455 8.1145534 12.6801345 8.3992352 8.3986449 3.3634935 10.7628017 10.6385272 2.4374941 3.5418369 4.3823560 8.9018377 2.2854910 9.2227852 11.2792178 11.5796033 9.6307751 1.8160262 8.3127850 10.6280617 6.3916921 6.6034083 -1.8841677 NA 11.1666071 7.0668523 6.0284564 8.1626919 7.2188557 10.4218577 11.1776143 4.2448490 8.6312680 NA 8.7521926 12.0547800 9.8549268 7.0522061 NA 1.1155660 8.8604020 -1.8841677 4.1816592 -0.8844340 4.5078834 5.8591919 1.7005285 10.1977171 NA 7.6449984 10.6513295 9.9018377 4.3443882 9.8426378 11.3723665 7.5418331 3.2030288 2.8704634 10.9227218 2.5078961 -1.8841677 0.9229590 1.5750218 13.398782 5.046303 8.435240 13.110805 10.608678 11.080090 13.521906 12.816712 9.415200 10.888501 13.308362 11.901736 9.043346 9.736246 1.285521 7.550197 11.498057 11.400392 11.822064 9.142783 13.049348 8.516447 5.115570 9.917276 9.089983 11.099039 6.325021 7.970437 11.461112 4.265317 -1.884168 11.427033 8.222785 7.486474 11.233536 10.572179 10.564459 7.455418 7.968878 12.559353 5.344388 12.986443 10.013414 10.405587 10.362606 10.207995 9.430151 10.464296 10.919901 9.511638 0.115566 9.555929 6.922215 10.687321 6.615413 10.793068 5.181659 10.972169 10.230937 7.234509 13.185395 10.045936 10.492779 12.654606 10.987088 5.255119 2.022474 10.621380 10.560842 10.683049 TCGA-BH-A1FM 44 1 1388 NA breast stage iiia t2 n2 m0 female 1998 NA NA infiltrating ductal carcinoma 8 white not hispanic or latino NA NA 1 2 2 2 1 2 5 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 1.733986e-07 27.2727272727273 33.3333333333333 6.06060606060606 21.2121212121212 12.1212121212121 10.7021484 10.8494352 11.8331882 9.2181021 9.8824991 9.1933038 9.5953297 11.2759768 9.1753260 13.7754719 11.1814185 11.1300765 0.1208827 10.8380530 3.8213837 7.2875295 6.3814755 8.6882702 11.5298082 13.4203943 0.5359534 14.9148220 -0.4639471 9.1423905 11.0081684 8.1358980 -1.4639471 3.9622529 10.5905896 0.1208827 6.3688748 8.3385015 -0.4639471 3.3939653 10.1190681 12.0844460 8.2224858 10.7509114 10.1657973 12.7839128 -0.4639471 11.5354569 13.8394807 7.1183909 9.1001348 10.5824272 11.6901705 3.5359907 -1.4639471 9.8618529 11.1626069 0.8579014 11.8966952 4.6445081 6.4001707 3.9954212 12.1640890 12.2244542 9.6081178 11.9901560 13.2953534 8.0963183 11.3834342 10.7590820 11.8285945 10.4151856 4.3173475 12.6735368 9.0015518 -1.4639471 9.0848071 10.3704563 -0.4639471 5.2364237 10.8184945 11.2933753 9.8448931 11.3688753 2.3433510 7.6704119 12.7865058 10.8193631 10.1312427 9.2536617 0.381900 0.816130 0.261080 0.038385 0.220080 0.283550 -0.199600 -0.290330 1.069300 0.875500 0.597300 -0.181660 -0.667340 0.072129 0.072129 0.072129 -0.354630 0.205670 0.671250 2.397900 -0.122240 -0.656390 -0.470230 2.544200 -0.036247 -0.036247 0.223010 0.926040 -0.674980 -0.194110 -0.548130 -0.671780 0.220080 0.213630 -0.200980 -0.011730 -0.199600 -0.290330 -0.693490 0.043035 0.058101 0.071267 -0.715940 -1.292900 -0.671850 -0.166360 -0.667340 -0.165970 0.078602 0.072129 0.087554 0.087554 -0.354630 0.205670 0.482020 0.122130 -0.679290 -0.679290 -1.218200 0.000000 -1.292900 -0.470230 -0.448340 -0.668900 -0.036247 -0.659270 -0.107600 -0.660020 -0.660020 -0.182 -0.667 0.000 0.000 0.206 0.206 0.000 0.269 -0.117 0.207 0.000 -0.620 -0.620 -0.659 -0.659 0.000 0.000 -0.194 0.622 -0.424 0.227 -0.167 -0.660 0.106 -0.491 -0.672 -0.553 0.220 0.220 0.235 0.000 -0.290 -0.290 0.000 0.000 0.921 0.921 -0.672 -0.672 -0.410 -0.410 -0.182 -0.667 0.000 0.000 0.206 0.206 0.000 0.269 -0.117 0.207 0.000 -0.620 -0.620 -0.659 -0.659 0.000 0.000 -0.194 0.622 -0.424 0.227 -0.167 -0.660 0.106 -0.491 -0.672 -0.553 0.220 0.220 0.235 0.000 -0.290 -0.290 0.000 0.000 0.921 0.921 -0.672 -0.672 -0.410 -0.410 8.9432530 NA 5.1209491 8.4155685 11.9248098 5.7807773 9.6087878 7.9968305 8.0593120 NA 10.9248098 11.1928168 3.4901850 1.1209491 0.5359534 8.2433444 2.7059116 8.5017695 11.7699045 11.5988746 8.7490894 NA 7.3688757 8.4593128 5.3814737 5.0751432 4.1209491 0.5359534 10.7916040 4.9622482 6.8074477 7.8579132 4.5132633 8.0398112 10.9853919 1.1209491 6.6020738 NA 6.7356576 12.1916278 7.2942081 5.8397656 -1.4639471 6.4901818 9.2346900 5.8488683 1.9954122 NA 2.7059116 2.9324203 -0.4639471 10.4850824 NA 6.2294726 10.4425002 10.9765949 4.5583534 9.9088503 12.3406205 6.7158947 1.9954122 3.6652677 11.1472407 3.5359907 -0.4639471 1.8579014 0.5359534 13.2250551 6.9995096 9.4376064 10.8380530 10.4455034 10.9716556 13.4203943 12.3442456 9.4024915 10.4930873 12.9349293 9.4421243 9.8618529 9.1552883 0.5359534 9.0972732 12.9834560 9.5345756 10.1006111 7.1941964 12.7138719 10.1167150 8.0457602 9.0506992 8.5939770 9.5114105 3.2364314 9.8483010 11.1814185 4.7454363 3.9954212 12.8147251 4.9283040 7.6565343 11.0447705 9.7617952 10.5946535 10.4593128 7.2013212 9.7642027 3.2364314 12.5759170 8.2224858 9.9104814 10.3308072 11.7767766 10.2991976 10.9596264 9.8663419 9.8351933 -0.4639471 7.9209632 8.2202956 11.1626069 3.0595456 11.8966952 9.2057561 9.8380530 12.1640890 6.9954167 13.4644574 10.5260893 11.8692804 11.8427590 8.8545281 NA 0.1208827 11.2461459 9.7933731 9.2975365 TCGA-BH-A1FN 34 1 2192 NA breast stage iia t2 n0 m0 female 1997 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 6 1 5 2 1 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.670339e-06 7.976338e-07 3.96039603960396 56.4356435643564 0.99009900990099 22.7722772277228 15.8415841584158 10.51574477 10.15570497 11.74578313 9.07865893 8.75575720 8.41092871 10.41863693 10.51670268 9.80677515 13.70848712 10.64051673 10.51813843 0.95969598 11.02715212 4.00411482 10.33421383 7.54468011 9.23234753 9.06169332 12.28502320 NA 13.65766266 8.44755771 9.18125663 11.23932834 3.66015281 -1.04037820 6.81769872 11.06038007 2.86661130 7.81769872 9.35739233 NA 3.20764301 10.04186678 10.85982982 9.68508392 11.43113892 11.15293505 10.91790788 1.95973307 11.15754873 14.56128543 7.80937328 10.57258627 10.68721277 11.65146125 4.86660636 4.68763743 10.26235669 9.79339847 -1.04037820 11.26149967 5.93699827 5.04718064 5.14954391 9.31836904 12.31864361 10.19213867 12.28319476 13.24872795 8.56519730 12.17631205 10.91210230 11.68038950 10.96218120 5.00411033 12.52553385 11.88712536 -0.04022984 10.37757029 9.13962681 2.96691030 4.89045642 11.06660777 11.17949127 10.19991277 9.71543988 2.12964571 5.93699827 13.21260487 10.92044375 10.40317930 9.32931514 1.3459000 2.3355000 0.1017600 0.6871300 0.0153080 -0.3671400 0.5886500 1.9261000 -0.7127400 0.1550200 1.5524000 -0.0364010 3.4309000 0.0077678 0.1288900 0.1288900 0.5608100 -0.7498600 1.0113000 -0.0225500 -0.7041500 0.1187300 0.1731700 0.1731700 -0.2178700 0.0752710 1.8887000 0.2978700 0.0884030 -0.4575800 -0.4003000 -0.7302900 0.1124200 -0.8089000 -0.0275350 -0.1479900 -0.7734600 0.7881300 0.8225500 1.1044000 -0.5505600 -0.7719000 0.4723800 0.3339700 -0.3391800 -0.6795800 1.5699000 -0.2673300 0.0077678 0.1288900 -0.3073300 -1.1999000 -0.2597100 -0.6553800 -0.6553800 -0.7462100 -0.0225500 -0.0225500 0.1481600 -0.2003700 -0.2488500 0.1731700 0.0512450 -0.2178700 0.0752710 -0.6783900 -0.0931390 0.2621600 -0.1877300 -0.328 -0.328 0.000 0.000 -0.297 -0.297 1.011 0.000 -0.704 0.588 0.388 -0.249 -0.076 0.000 0.000 -0.218 0.000 0.882 0.882 0.281 0.281 0.000 -0.188 -0.215 -0.215 0.000 0.409 0.000 0.000 -0.148 -0.148 0.000 0.000 0.441 -0.110 -0.713 0.000 -0.005 -0.339 0.000 0.000 -0.328 -0.328 0.000 0.000 -0.297 -0.297 1.011 0.000 -0.704 0.588 0.388 -0.249 -0.076 0.000 0.000 -0.218 0.000 0.882 0.882 0.281 0.281 0.000 -0.188 -0.215 -0.215 0.000 0.409 0.000 0.000 -0.148 -0.148 0.000 0.000 0.441 -0.110 -0.713 0.000 -0.005 -0.339 0.000 0.000 7.5104643 NA 6.0992700 11.0075233 11.0156780 5.8493138 10.7382056 8.1436261 7.5208151 -1.0403782 11.6497157 11.1043473 4.2076430 2.2816389 3.0471719 9.6223861 3.8176949 10.4788625 11.5183776 11.3886013 9.7910250 3.2076430 8.1445930 10.7162741 5.0258084 4.2076430 3.2076430 3.9597145 10.2850232 4.1296457 6.9022328 8.5276737 4.6035729 10.4186369 10.8281545 0.5446832 8.6214959 2.4191613 8.3754596 12.1194314 7.3347569 7.4515705 NA 4.3520381 8.4109287 3.7146082 2.8666113 0.5446832 3.2816389 5.1495439 0.5446832 10.4773871 -1.0403782 7.3605969 10.9359238 9.4813181 6.9312611 9.6523332 13.5748875 7.4273229 3.5446832 4.8177000 10.6383179 3.4832741 NA 2.9597145 0.9596960 10.449666 7.483280 8.181305 11.027152 10.791421 11.256060 12.285023 10.210608 9.557677 11.450318 13.263712 11.973564 10.262357 11.552408 2.129646 7.506612 11.095427 10.7007633 11.7523047 6.6179288 13.9006718 9.1195891 6.1296436 7.7245896 9.3029035 9.4101043 4.4191478 3.3520381 10.6405167 9.0577497 NA 11.4513203 7.5927127 8.8795940 11.5202894 9.7328570 10.7973456 8.0630056 8.3062312 11.1933374 3.9597145 12.6727852 9.6850839 9.9051616 9.9117308 12.4004572 9.4764028 9.1233674 10.0675887 9.4891483 9.9576028 8.5175643 8.3450410 9.7933985 3.7146082 11.2614997 8.0338590 10.4818088 9.3183690 8.3065197 13.0998285 10.5465576 10.3396376 13.2665627 10.9197197 0.5446832 NA 10.8867549 10.5314704 9.1618416 TCGA-BH-A1FR 73 1 1642 NA breast stage iiib t4b n1a m0 female 1997 NA NA other, specify 4 white not hispanic or latino NA NA 3 1 2 2 1 1 3 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 3.467973e-08 40 10 0 20 30 10.60230599 9.85881481 11.87544980 9.68355628 8.22433939 8.61136237 11.49262769 9.54201094 9.27423254 13.92559619 8.13421786 10.95087808 2.77667253 12.13719930 2.66975247 9.33672546 7.17876443 8.43691638 6.25471308 14.31568601 2.13924027 14.59804111 4.46116181 9.65561873 11.19331245 7.68011756 -0.03061924 8.70909140 11.65799823 1.55429414 7.24543481 6.47710577 1.96930708 4.55427572 9.81166112 10.53964089 10.41949107 10.74080026 10.34543619 11.31859201 1.96930708 11.78869158 14.37441901 8.35821074 11.16652748 11.52677450 11.13170214 4.01370343 -1.03061924 8.71918036 9.76128760 -0.03061924 11.12570992 3.49287865 6.42874205 3.49287865 10.83851905 11.86753428 10.14236327 10.89523604 12.67807140 7.73749479 10.50604372 10.81807067 10.96649031 10.83774752 4.58401843 11.73976821 10.85615050 -0.03061924 10.22787678 8.64526790 4.08159528 5.09859220 10.40028602 9.95586390 10.06338847 9.71498505 1.55429414 5.15913669 11.84410008 11.19782891 10.60366807 9.16406771 -0.00263220 -0.00664320 0.00013863 -0.00027724 -0.00069303 0.00000000 0.00124810 -0.00268510 -0.00142160 0.00555290 -0.00332430 0.00208050 0.00113020 -0.00083160 -0.00083160 -0.00083160 0.00013863 0.00013863 -0.00687830 -0.00110870 0.00138680 -0.00047290 -0.00047290 -0.00047290 -0.00235530 -0.00235530 -0.00235530 0.00513590 0.00027728 -0.00263220 0.00444110 -0.00027724 -0.00027724 -0.00360110 0.00000000 0.00000000 -0.00761010 -0.00268510 -0.00268510 -0.00124730 -0.00124730 -0.00142160 0.00430210 0.00430210 0.00430210 0.00430210 0.00113020 -0.02849100 -0.00083160 -0.00083160 -0.00083160 -0.00083160 0.00013863 -0.00192030 -0.00192030 -0.00166290 -0.00110870 0.00069327 -0.00097017 0.01070300 0.00221930 -0.00047290 0.00138680 -0.00235530 -0.00235530 0.00138680 0.00346870 0.01656500 0.00374650 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.6095559 NA 5.6558126 10.3945267 10.9401357 7.8718972 11.6766699 8.7181075 9.7782750 1.9693071 11.7401811 10.1972335 4.4287454 4.3616280 2.4287320 7.5315530 5.6972317 9.5840207 11.3557122 10.7746516 9.1177875 1.5542941 8.0673429 10.4696547 6.7506708 4.2547150 NA NA 10.6248415 5.3955770 5.5840214 8.0541191 4.7506708 11.1132106 10.4184594 7.7894900 8.6766701 NA 6.3955753 12.9397762 8.5821792 8.5692237 -1.0306192 0.9693071 7.8701779 -1.0306192 5.1190573 1.2912499 5.5692237 6.5438670 2.5542696 10.6086515 -1.0306192 7.0567732 10.1744932 9.6050289 4.6131662 10.5070145 11.8444842 8.2219761 2.6697525 3.4928786 10.9822845 8.3268627 NA 2.6697525 NA 13.245726 5.273091 9.030007 12.137199 10.324513 10.434367 14.315686 13.251168 8.808515 10.605935 12.429255 10.576179 8.719180 7.546739 2.776673 7.766972 11.011654 11.07390958 12.22861270 8.58585977 14.18972464 8.86715640 5.90004804 9.21010219 8.58029852 10.44153961 7.28219421 10.50895428 8.13421786 7.03000715 -0.03061924 10.63153414 5.23609841 7.45939965 9.52773151 10.48155748 10.58861374 9.03802183 9.08695383 10.91804307 6.08825186 11.50282549 10.41949107 10.65581136 10.07783528 12.17647768 9.50458623 10.23843746 10.14173829 9.22197614 NA 9.38424974 6.69054700 9.76128760 6.43691638 11.12570992 4.96931169 12.01012619 10.83851905 7.05146020 14.04987853 10.69935634 10.41484303 12.96498963 9.89040793 3.13924027 -0.03061924 10.68869966 9.97983887 9.57386395 TCGA-BH-A1FU 44 1 1688 NA breast stage ia t1c n0 m0 female 1997 NA NA infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 3 NA NA 2 6 4 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 23.0769230769231 23.0769230769231 0 23.0769230769231 30.7692307692308 11.0009662 10.2950664 12.1122628 10.0763990 8.0618583 8.8398557 10.3172735 10.4513896 11.3219183 13.7616236 9.9807024 10.9911769 3.4931734 16.8292382 3.4365883 9.8894469 4.8371258 8.9513415 7.9064740 11.9966915 1.6000794 10.6168950 6.9726410 8.6538189 11.0907944 5.8907628 NA 10.9779170 10.6542065 5.2021238 9.1135323 7.7870850 0.7927721 5.6630969 9.8032600 10.3182527 9.5198013 10.0885007 10.2074170 11.7951952 5.1502835 8.6814749 15.8186176 7.6721927 9.8439408 11.1866585 11.2084736 5.1146585 1.3776791 9.6646371 11.7863779 0.3777346 11.4994437 6.4931718 6.8316505 5.2684643 10.4239089 11.4957702 11.3805093 12.5665922 12.7863779 6.9116724 11.1661408 10.6746067 11.3907843 11.8041338 5.4509440 11.9882578 9.9570103 -1.2072279 10.5891771 10.1731929 3.1103298 5.2356735 11.3480399 9.9689049 9.9245888 10.3497168 4.4651582 10.4383903 13.7446084 12.2981713 10.4383903 10.0275493 0.12579000 0.12579000 -0.15848000 -0.12121000 0.10599000 -0.20921000 0.04939800 0.04939800 -0.32217000 -0.32217000 1.58180000 0.03397200 0.03397200 0.02735700 0.02735700 0.02735700 -0.13225000 -0.12135000 -0.17664000 0.10060000 0.07915900 -0.05307100 3.65690000 -0.03067700 -0.11535000 -0.11535000 -0.11535000 -0.00097017 0.12579000 0.12579000 -0.01904000 -0.12121000 -0.15208000 0.07187100 -0.14477000 -0.14477000 0.04939800 0.04939800 0.04939800 0.00000000 -0.03681000 -0.32217000 -0.23264000 -0.17161000 -0.17161000 -0.08479300 0.03397200 0.03397200 -0.06322000 0.02735700 0.02735700 0.02735700 -0.13225000 -0.12135000 -0.12135000 -0.15911000 0.10060000 0.10060000 0.07915900 0.03990200 -0.05307100 -0.31342000 -0.05838400 -0.11535000 -0.11535000 -0.00097017 0.22854000 0.12417000 0.12417000 0.000 0.000 0.000 0.000 -0.132 -0.132 -0.179 0.101 0.000 0.000 0.000 0.000 0.000 0.271 0.000 -0.115 -0.115 0.126 0.126 0.000 0.000 0.213 0.124 0.000 0.000 -0.121 -0.121 -0.152 -0.152 -0.145 -0.145 0.000 0.000 0.000 0.000 -0.181 0.461 -0.172 -0.172 0.000 0.000 0.000 0.000 0.000 0.000 -0.132 -0.132 -0.179 0.101 0.000 0.000 0.000 0.000 0.000 0.271 0.000 -0.115 -0.115 0.126 0.126 0.000 0.000 0.213 0.124 0.000 0.000 -0.121 -0.121 -0.152 -0.152 -0.145 -0.145 0.000 0.000 0.000 0.000 -0.181 0.461 -0.172 -0.172 0.000 0.000 7.9676574 2.1146669 5.6875507 10.5650464 11.5463665 5.3140983 11.6837560 10.3957369 7.9317971 2.2521734 11.7948436 11.0693797 2.6996183 NA 4.7927304 8.9310037 3.4365883 10.2935737 11.5712197 10.7621183 8.9025623 0.3777346 8.8206379 9.4862188 8.1078814 10.7022499 4.2189981 -1.2072279 11.3616380 6.1590539 7.1893363 8.7145728 9.0512979 9.4117963 10.6000868 3.9220170 8.7130847 -0.2072279 8.2042430 13.6800477 7.2105847 8.2377468 -0.2072279 7.3814460 7.6845158 3.5476226 4.5740894 -0.2072279 6.7293692 3.1884801 4.7469308 11.2108480 7.4473676 10.1524813 10.9679695 9.7003737 5.9012555 10.6576917 12.1818254 8.4722120 3.1850419 4.4651582 10.3255747 3.8801957 NA 2.1146669 3.8371258 12.160867 6.362587 8.849369 16.829238 10.022152 10.892408 11.996692 10.740369 9.357834 10.931004 13.162125 10.859830 9.664637 7.696614 1.114634 7.500091 12.764275 11.6833761 12.5373555 6.3926454 13.9380666 9.1325817 8.8343911 8.8960196 7.8668734 10.5805854 7.6692486 7.9626566 9.9807024 6.9220146 4.5740894 10.9067994 7.5576031 7.8773541 14.2545310 10.9380272 10.8688793 8.5757302 8.3851890 10.8638589 7.4401906 10.5171647 9.5198013 10.3025069 9.7642753 11.4451287 11.3552128 9.9168531 10.7101039 9.6958606 3.4931734 9.6079711 8.6974267 11.7863779 8.3644844 11.4994437 8.3945026 10.8025605 10.4239089 7.9676574 14.3968217 10.3030016 10.4302624 12.2493429 10.7389071 4.6000854 0.3777346 10.7089845 11.0197460 9.8894469 TCGA-BH-A201 64 0 NA 856 breast stage ia t1 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 5 3 2 3 3 4 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 6.935946e-08 12.5 31.25 0 25 31.25 10.5610034 10.5770318 11.6854471 10.0223252 8.0184890 9.2418566 9.9159012 10.5951756 10.5802163 13.5536584 11.1309423 10.9685486 0.8806463 12.6694981 3.4656088 10.6226725 6.7344725 8.8806439 8.6153534 12.3461252 -0.7043945 13.2405306 5.9751624 9.0354196 10.6341392 7.0064877 1.2956643 7.3989694 10.1098632 2.5436196 7.5124268 9.1325208 0.6175806 4.1285739 10.0848073 10.6598159 10.2326873 12.2824122 9.6581731 11.8809960 11.3804897 10.5352798 15.3393602 8.3541467 9.3482495 11.5340861 11.3676464 4.8655378 2.8806463 10.2668656 12.4548431 0.2957230 11.8054563 5.8425766 5.9821813 4.8955935 10.8246237 12.0157118 10.0852150 13.4934739 13.2455080 7.9627931 11.1407793 10.7813496 11.6997584 11.5328913 5.2264199 12.0989043 12.9963920 0.2957230 10.1984333 9.5822391 3.2784457 4.3831444 10.3768318 9.8084217 10.3973287 9.7865322 6.1721975 9.8328997 13.6671857 12.9591282 9.6847749 9.3644595 0.43682000 0.43682000 0.01864100 0.46434000 0.00736090 0.00917050 -0.00124730 -0.47088000 2.47010000 2.29390000 0.04060900 0.00152550 0.00152550 0.01377200 2.95640000 3.65690000 -0.01257600 -0.01257600 0.00000000 -0.00304750 -0.00744910 -0.01697900 -0.01697900 -0.01697900 -0.02342900 -0.02342900 -0.02342900 -0.01188700 -0.00691950 -0.00691950 0.03284500 0.01864100 0.00736090 0.00736090 0.00917050 0.00917050 -0.00124730 -0.47088000 -0.47088000 -0.00013862 -0.00013862 -0.52041000 -0.00664320 -0.00664320 -0.00664320 -0.00664320 0.00152550 0.00152550 0.01377200 -0.50764000 -0.51022000 -0.51022000 -0.01257600 -0.01257600 -0.01257600 0.00000000 -0.00304750 -0.00304750 -0.00581400 0.00592380 -0.45565000 -0.01697900 -0.12382000 -0.03367700 -0.02342900 -0.01188700 0.00305220 -0.00912860 -0.00912860 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 0.000 -0.124 -0.124 0.000 0.000 0.000 0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 -0.520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 0.000 -0.124 -0.124 0.000 0.000 0.000 0.437 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 -0.520 0.000 0.000 0.000 0.000 0.000 8.2600224 NA 5.4755908 10.6807348 10.7571608 6.6317868 10.7269177 10.1803708 7.9186480 -0.7043945 12.5102281 10.7866801 3.5436072 2.6880013 4.5810861 8.7825164 1.9961356 10.3874473 11.6576251 10.8167910 9.2160343 1.1030612 7.9159009 9.9025492 5.7386246 5.8348401 2.3831375 -0.7043945 11.1697021 5.2498776 7.8133509 7.3373409 6.3671439 10.2911659 10.6139416 3.5051287 8.1660461 -1.7041594 7.7734399 12.6875290 8.1920136 7.2085709 -0.1193537 0.6175806 8.2729614 3.2956789 4.4042083 0.8806463 2.9961175 5.3206002 1.7551012 10.4799369 2.4656088 10.2055744 10.6764130 9.9444882 4.7050711 9.9930833 12.4040424 8.1675867 2.8192390 3.4249624 10.1675866 0.2957230 -1.7041594 2.8806463 1.8806463 14.7337064 6.0030400 8.9935176 12.6694981 10.4864720 10.8493106 12.3461252 11.7325230 12.0615123 10.9395375 13.5722056 11.0829718 10.2668656 8.4081208 -0.7043945 7.6062942 10.9614613 11.5735499 11.9363782 7.7135336 14.0768353 9.1973025 5.9103921 8.8759398 8.8241355 10.2906216 4.9103921 5.7551119 11.1309423 7.6685461 4.6532320 11.5177215 5.9961221 8.0072106 12.2256794 9.2227186 10.7409549 7.6728920 8.7145879 12.2066987 4.8192441 11.2540745 10.2326873 10.4048591 8.9636799 10.7476651 10.0790889 10.7855293 10.6201432 8.7612477 3.2956789 9.0984964 7.8437710 12.4548431 5.4146227 11.8054563 8.2729614 10.7048071 10.8246237 7.7571606 14.1081094 9.9909096 9.9891682 13.4656846 10.6925536 -0.1193537 0.8806463 10.7101023 10.7698943 9.5880030 TCGA-BH-A202 60 0 NA 795 breast stage ii t2 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 2 1 1 2 2 5 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 6 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 6 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 7 0 0 6 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 6.935946e-07 1.387189e-07 20.8333333333333 25 4.16666666666667 29.1666666666667 20.8333333333333 10.6366946 10.2602141 11.5761159 9.6661718 9.2534481 8.5236576 9.0730814 10.0699341 10.3141163 12.1059763 10.1572115 10.4963047 3.7615938 15.5205709 3.9918891 8.5817742 5.2007084 8.6740238 7.9113422 12.7086137 NA 12.2273184 2.7050047 9.0036112 11.8391297 4.0153548 -0.3538373 10.0952665 10.1396397 2.0611541 8.1352968 8.1878598 NA 3.8685090 10.1598454 10.9644723 9.5565107 10.5007265 9.9426517 11.1899552 0.3830545 9.0498401 14.7085435 7.8021506 9.4004429 10.7895010 11.6747146 4.4705434 NA 9.2391975 14.1130440 -0.9387077 10.4540094 5.7193669 7.3694944 5.7890745 9.2348325 11.9350800 10.1545728 12.4049656 12.3681426 6.7300407 11.2045385 10.4625202 10.7535529 10.8068296 4.8940465 12.7928986 10.3214869 NA 10.0018360 10.6816042 2.6467157 5.5689502 8.2373285 9.9369047 10.1830125 11.4625682 6.3557757 8.8168774 12.8027276 12.0216098 10.2137570 8.4491726 1.2277000 1.2277000 0.3093700 0.2826300 -0.0366740 0.2356600 -0.0395290 -0.0395290 -0.3970800 1.6389000 2.1053000 -0.3421700 -0.3421700 0.2530800 0.2530800 0.2530800 0.1545700 0.0000000 -0.3778600 -0.3738100 -0.0193140 -0.3602200 3.6569000 0.3015400 -0.0073339 -0.0183610 -0.0183610 0.2962800 -0.0227440 -0.0227440 -0.3627200 0.3093700 0.3739700 -0.0212350 0.2356600 0.2356600 -0.0395290 -0.0395290 -0.0395290 0.2687500 -0.0754780 1.8480000 0.2606600 0.2606600 0.2606600 0.2783700 -0.3435700 -0.3435700 0.2530800 0.2530800 0.2530800 0.2530800 -0.2667300 0.0000000 -0.3731300 -0.3778600 -0.3738100 -0.3738100 -0.0193140 -0.3692900 -0.3602200 0.3015400 -0.0722740 -0.0073339 -0.0183610 0.2926200 0.3127400 0.2065600 0.2065600 -0.342 -0.342 0.253 0.253 0.120 0.000 -0.378 -0.374 0.000 0.327 -0.042 -0.059 0.302 0.000 0.000 0.000 0.000 0.000 1.228 0.296 0.296 0.313 0.207 0.000 -0.350 0.309 0.309 0.374 0.000 0.236 0.236 0.000 0.000 0.269 0.000 0.332 1.169 0.261 0.261 0.100 0.100 -0.342 -0.342 0.253 0.253 0.120 0.000 -0.378 -0.374 0.000 0.327 -0.042 -0.059 0.302 0.000 0.000 0.000 0.000 0.000 1.228 0.296 0.296 0.313 0.207 0.000 -0.350 0.309 0.309 0.374 0.000 0.236 0.236 0.000 0.000 0.269 0.000 0.332 1.169 0.261 0.261 0.100 0.100 8.53688866 7.00073469 6.00952185 9.42911608 11.31633143 6.62949214 10.99226214 8.48186279 7.58612821 NA 12.32119272 11.45474956 2.23109443 1.86852874 2.23109443 8.19429738 4.14861690 11.62923020 11.74425959 11.13529674 10.02079511 1.86852874 8.06818281 8.87252991 6.61190269 2.52059825 0.86852874 0.06115406 10.98948859 7.78566890 5.75464169 8.71400024 7.27790108 9.72752128 10.83181922 3.30908885 8.47795291 NA 7.86528663 12.53612869 7.23108002 7.12724429 0.06115406 7.57488260 9.10144497 2.70500472 1.38310981 NA 6.06678023 7.36388594 1.52059825 11.01079970 -0.35383734 7.11372342 10.45856256 9.95635191 5.12724532 9.34713544 13.85793007 9.26572638 6.65361182 3.14862504 10.30224467 1.52059825 NA NA 1.96805388 8.9930524 7.1618172 8.8701196 15.5205709 9.6702786 11.8283052 12.7086137 12.1596809 9.5144259 11.0251351 13.0454847 11.6963066 9.2391975 9.4165064 -0.3538373 7.9918925 11.2958230 11.2323321 10.9173863 5.7264907 13.7608901 9.1591874 6.4534731 8.3138209 10.4853216 10.3481663 6.5449706 3.7050158 10.1572115 8.6703340 4.3279388 10.2032623 7.8668993 8.3764293 11.8296498 9.5910739 10.6458830 8.3546271 9.0674814 12.8303216 5.7335794 11.2815699 9.5565107 9.6932418 10.0462857 11.0464636 9.3267703 10.8030436 10.9430340 9.7706700 5.1904371 9.3429578 9.7222385 14.1130440 5.0269417 10.4540094 7.3419262 10.3312316 9.2348325 7.8506888 13.7545334 10.3617939 10.8650846 14.1027717 10.0713338 0.6461627 0.3830545 10.9790867 10.2035815 9.7189203 TCGA-BH-A203 78 1 1174 NA breast stage iib t2 n1b m0 female 1996 NA NA infiltrating ductal carcinoma 35 white not hispanic or latino NA NA 4 2 1 1 2 6 2 9 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.24847e-06 7.282743e-07 33.3333333333333 19.2982456140351 1.75438596491228 26.3157894736842 19.2982456140351 9.5773083 9.7566057 11.7573528 8.8203459 8.6061298 10.2715375 10.1087080 11.0472260 10.9845392 13.5950547 10.2428010 10.8226324 0.8418926 11.8447366 1.1049405 10.2130448 5.7488127 9.3345759 13.5898627 12.9045074 -1.4799550 12.7651004 1.6899253 9.1593343 13.0207731 8.8419216 3.2204383 11.6340611 11.1658770 0.1050075 8.2782167 9.7920400 -1.4799550 5.1199081 10.1105805 10.9028877 9.6041375 10.8556630 10.6170380 11.1570711 13.3170976 10.6232812 15.2232347 8.6871730 8.8203459 11.0324870 11.0654406 4.0745825 4.3013535 10.3564383 12.9899532 -0.4799550 11.3845665 5.2479123 7.0396297 4.7488101 10.8186288 12.1388378 10.0386466 12.1325164 12.9860699 7.4448062 11.1477553 10.2751690 11.1443320 11.1793204 4.9794263 13.8004743 10.1231561 -0.4799550 10.7756122 8.5242138 3.5204474 4.8237748 11.3961266 10.7048688 10.0469817 9.5657531 2.2204228 10.0093398 13.8158700 11.5907852 10.1529887 8.7548110 2.1107000 0.6725200 0.1888900 1.5074000 0.4996000 0.6437800 0.1948200 2.5347000 3.6569000 -0.2965000 0.7053200 -0.0414310 0.0092051 -0.3250700 0.4446000 0.4446000 0.2771000 -0.0223610 0.0872450 -0.0603450 -0.0507760 -0.3180900 -0.3102600 0.2268400 -0.3045100 0.1149200 0.1149200 0.0000000 -0.0309500 -0.3145900 0.1544100 0.1888900 -0.6245500 -0.1657400 -0.2289600 0.0155870 0.1948200 -0.3324600 -0.0704020 -0.0626290 -0.1227800 -0.3273900 -0.6020600 -0.0733320 -0.0616890 0.1926900 0.0092051 -0.3250700 -0.3250700 0.4446000 0.4446000 0.4446000 0.2771000 -0.0579240 -0.0607480 0.0872450 -0.0668440 -0.0668440 -0.2160200 -0.3073300 -0.3180900 -0.3102600 -0.6078600 0.0155870 0.1149200 -0.1166500 0.2364300 -0.0442800 0.4833700 0.000 0.000 -0.325 0.120 0.277 0.000 0.000 0.000 0.000 -0.285 0.000 -0.166 0.152 -0.310 0.000 0.000 0.000 0.146 0.146 3.657 3.657 0.236 0.450 0.182 0.182 0.189 0.189 -0.274 -0.274 0.644 0.000 0.195 0.195 0.000 0.000 -0.327 -0.327 0.000 0.000 0.000 0.000 0.000 0.000 -0.325 0.120 0.277 0.000 0.000 0.000 0.000 -0.285 0.000 -0.166 0.152 -0.310 0.000 0.000 0.000 0.146 0.146 3.657 3.657 0.236 0.450 0.182 0.182 0.189 0.189 -0.274 -0.274 0.644 0.000 0.195 0.195 0.000 0.000 -0.327 -0.327 0.000 0.000 0.000 0.000 7.9187368 0.1050075 7.0038091 10.1365423 12.3649934 5.7403232 11.3125804 9.1678567 9.1298556 0.5199444 11.4300740 10.9589828 3.2748878 0.5199444 4.5860802 8.4507308 4.4026335 11.2045229 11.2744634 12.2475949 9.7625721 1.5199947 8.9346787 10.3868859 7.0078335 11.8134651 4.4026335 1.9794401 10.4650715 3.4268820 6.3779740 8.6861566 7.5256179 11.9401274 10.5817021 2.4268820 8.7488121 NA 8.9389003 13.4974075 8.7135188 9.8458610 -0.4799550 7.7844359 8.3576215 2.1049405 2.7679302 5.7867793 6.2479142 3.5643904 1.9794401 11.5067244 0.1050075 9.5773083 10.5347114 10.1893215 4.9957287 10.1906497 13.0266110 8.0513748 4.1049572 4.0118445 10.4466601 2.3273425 -1.4799550 -1.4799550 1.1049405 12.773709 6.569842 9.892858 11.844737 10.121764 11.401681 12.904507 10.667834 9.582040 11.243441 14.059819 10.393438 10.356438 9.362344 -1.479955 8.294781 11.692577 11.3721328 12.6123377 9.2547032 14.5041658 8.5860828 8.2169612 8.7937889 8.6193411 10.9011795 6.3965106 8.4178390 10.2428010 6.1638489 1.5199947 10.6418507 5.0745825 7.9077956 11.2262736 11.1047211 10.8950329 8.5044118 8.6376367 8.8631793 7.5994785 12.5570393 9.6041375 10.2342389 10.1844407 10.8059736 9.1374610 10.0812814 10.5742586 9.4705493 0.8418926 10.2476162 6.9165985 12.9899532 7.8053956 11.3845665 6.8053956 11.1591080 10.8186288 6.9080107 14.0168472 10.5813646 11.3295606 12.2814408 11.2228155 4.2748804 0.8418926 10.0945870 10.3229136 10.0012884 TCGA-BH-A204 80 1 2534 NA breast stage iib t2 n1b m0 female 1996 NA NA infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 1 1 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 2.080784e-07 26.4705882352941 11.7647058823529 0 35.2941176470588 26.4705882352941 10.5678377 10.6272232 11.0514449 10.5251415 8.8257570 8.7988036 9.1690333 9.6051076 7.9873988 13.0902641 9.7128336 10.9227404 0.1825652 11.8218726 3.7675806 7.0652653 3.1826287 8.6412339 8.3744218 13.1147263 4.9267822 14.3274877 NA 9.6383604 11.5249193 5.8493788 1.0306186 9.5063526 9.6201663 2.3201380 7.9587261 6.6680496 NA 4.6288786 10.4458915 11.2606397 11.1554586 10.6006858 10.7368274 12.6965473 -2.1392358 11.4160023 13.6834393 9.6782295 9.4376510 12.6364074 12.1941291 3.4152854 5.1916100 9.7739576 10.7982519 -1.1392358 10.8259374 5.4229360 4.4754027 3.3201236 10.7895827 12.4501113 10.1570369 10.4587467 13.5084056 7.6272231 10.8809797 10.6506496 10.4783913 10.4822883 4.9899791 11.7265241 10.2945405 0.6680283 9.4219821 10.4241289 1.4480552 5.1735752 12.2298826 10.8369003 10.4966390 10.8804587 3.1086248 8.6494125 11.3836435 10.0716699 10.2008225 8.1379814 0.02412700 0.02820000 0.00000000 -0.03857800 -0.04251700 -0.01106000 0.00471900 -0.04075200 3.65690000 2.89900000 1.53230000 0.01237600 0.03693900 0.01419000 0.01023400 0.01023400 0.00485790 0.00485790 0.05167200 -0.88820000 0.04287400 0.13495000 1.05150000 0.10731000 -0.43626000 -0.43626000 -0.43626000 0.10322000 -0.75986000 0.02412700 0.02160300 0.00000000 -0.04251700 -0.04251700 -0.03045700 -0.03045700 0.00471900 -0.04075200 -0.00069303 -0.00788630 0.81843000 -0.87408000 0.01391100 0.01391100 0.01391100 0.08681100 0.03693900 0.07224400 0.01419000 0.01023400 -0.84018000 -0.84018000 0.00485790 0.00485790 0.09202500 -0.03422300 -0.82448000 -0.82448000 0.05380600 -0.81153000 0.13495000 0.13169000 -0.83833000 -0.42502000 -0.43626000 0.07802000 -0.07894300 0.16505000 -0.76510000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.946 0.134 0.135 0.135 -0.838 -0.838 -0.436 -0.436 -0.797 -0.797 0.000 0.000 0.000 -0.600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.621 1.434 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.946 0.134 0.135 0.135 -0.838 -0.838 -0.436 -0.436 -0.797 -0.797 0.000 0.000 0.000 -0.600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.621 1.434 0.000 0.000 0.000 0.000 8.7402776 -2.1392358 3.7914286 8.6197501 10.6971392 4.8469897 9.0356198 10.4410187 7.7279729 -2.1392358 11.5793341 10.5490298 3.1086248 NA 2.9899746 9.1397243 4.8148888 8.3645199 11.7474387 11.2256496 9.6114013 0.1825652 7.8677217 6.5331194 5.6021599 4.0306186 1.1826287 NA 9.8889456 8.4540854 5.8663195 8.3674978 4.2357347 8.6930778 10.8497339 4.5189065 7.1321573 -2.1392358 7.4494087 11.8980696 7.8747146 6.4900502 -2.1392358 7.1960847 8.7210052 -0.5542733 4.0505191 -2.1392358 0.4456208 5.8017407 0.1825652 10.3054503 NA 7.2160454 9.8297210 10.5168956 3.9692150 8.7973321 11.9781750 8.2422371 0.4456208 0.4456208 10.6025825 8.9098622 NA 1.7675701 NA 13.793679 5.146097 9.128651 11.821873 10.073583 10.953451 13.114726 13.375100 10.106247 11.225376 12.328809 10.977038 9.773958 8.002802 1.320138 7.807600 11.450228 10.738937 10.359294 7.661594 14.025205 9.026229 1.561155 9.862102 10.624114 10.433851 4.767586 9.897898 9.712834 6.518906 -1.139236 10.100591 3.743343 8.019771 11.410359 9.771712 10.076834 9.569778 7.479079 11.542811 1.320138 12.005683 11.155459 10.108028 9.815618 12.643590 7.740277 11.413123 10.920715 9.276964 2.905081 7.667743 7.067196 10.798252 1.445674 10.825937 6.585207 10.702848 10.789583 7.259438 13.938470 9.730288 10.187124 12.369541 8.495505 -2.139236 2.182629 11.640926 10.242507 9.824313 TCGA-BH-A208 48 1 1759 NA breast stage iib t2 n1b m0 female 1995 NA NA infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 4 4 6 1 2 6 5 9 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 7 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.387189e-06 3.467973e-07 9.61538461538462 51.9230769230769 5.76923076923077 19.2307692307692 13.4615384615385 10.5871154 10.0001081 11.1227455 9.2394150 8.1213351 8.6565314 9.1190757 10.3557722 10.9837469 12.7097741 10.1336995 10.4455192 6.1592154 12.1715330 2.1236000 10.3393668 5.8784777 8.6218420 8.9852983 10.5304338 -1.1982619 8.2425320 5.2610945 9.7810882 9.9778361 4.7323995 0.3865902 9.2216231 10.6596440 4.0495872 8.2131742 8.6025630 0.3865902 6.7616656 9.5607190 10.3724674 9.5780960 9.5029694 9.7434443 10.8794801 9.9212526 9.1100019 15.9467692 8.4973613 9.0111163 11.1780598 11.0859088 5.9715872 -1.1982619 9.8288780 12.6347508 -1.1982619 11.6292042 7.4705483 6.2195151 5.5960794 10.5850705 11.3903777 10.1145460 13.1620986 12.6736645 8.4934064 11.4328401 10.6224762 10.9930307 11.0376772 4.3252281 11.9189814 9.6510682 4.0870639 10.5739776 8.9803278 3.3896219 5.6843054 10.0713741 10.5669491 9.7860814 9.2824532 5.8016631 11.3480752 14.1395985 11.9846780 9.5739775 9.8990368 0.0065262 0.0065262 -0.2161400 0.7526100 0.5974600 0.2571500 0.7806100 0.2240700 0.5257300 0.0061090 0.0061090 -0.2356900 -0.2356900 0.1748300 0.6664100 0.6664100 -0.0697340 1.0996000 0.2659200 0.0207630 -0.2397300 -0.2342300 -0.2342300 -0.2342300 0.3460000 0.3460000 0.3460000 0.2390700 0.0168450 0.0065262 0.0000000 -0.2161400 0.4698100 -0.2764300 -0.2089600 -0.1962500 -0.2901100 0.2240700 0.2240700 -0.2382400 -0.0324500 -0.5087700 -0.1528500 -0.1528500 -0.1528500 -0.1528500 -0.2356900 -0.2356900 0.1748300 0.1748300 0.6664100 0.6664100 -0.0697340 -0.2377700 -0.2377700 0.2582700 0.0207630 0.0207630 -0.3233300 -0.2336100 -0.2342300 -0.2342300 0.2300900 -0.2670900 0.3460000 0.0130740 -0.0628980 0.2434200 -0.2615500 -0.236 -0.236 0.175 0.666 -0.238 -0.238 0.258 0.000 -0.368 0.258 0.025 -0.234 -0.234 0.248 0.248 0.346 0.346 0.000 0.000 0.000 0.226 0.000 0.243 0.000 0.000 -0.216 -0.216 -0.492 -0.492 0.061 -0.196 0.781 0.240 0.000 0.000 -0.509 0.000 -0.153 -0.153 0.000 0.000 -0.236 -0.236 0.175 0.666 -0.238 -0.238 0.258 0.000 -0.368 0.258 0.025 -0.234 -0.234 0.248 0.248 0.346 0.346 0.000 0.000 0.000 0.226 0.000 0.243 0.000 0.000 -0.216 -0.216 -0.492 -0.492 0.061 -0.196 0.781 0.240 0.000 0.000 -0.509 0.000 -0.153 -0.153 0.000 0.000 7.2321158 NA 6.7960162 9.7301814 10.7518543 5.8425565 10.1398423 10.1102865 8.5913432 3.8891230 12.7551320 12.1842222 2.8891230 NA 4.0870639 8.2794211 4.8240295 10.9491860 11.8307777 10.0031744 8.4598746 2.2611095 8.3271839 9.9251378 7.3330444 4.9309454 5.5159079 NA 11.3417910 4.2935176 9.3271839 8.7775111 8.0448372 8.6627499 9.9784595 2.9715895 7.3369385 NA 8.9988798 12.9707268 6.8016631 8.5944534 -1.1982619 5.1939806 7.2110541 -1.1982619 5.2110550 -1.1982619 4.6843082 4.6345526 3.0495959 10.2482294 0.8016553 9.7507602 10.6812462 9.8616834 6.2110531 10.2497793 12.2801799 8.9399347 2.1236000 4.7085515 10.3247348 1.3866454 NA -0.1982619 2.2611095 12.623684 6.340822 8.894420 12.171533 10.656921 10.319332 10.530434 10.783587 9.297518 10.642048 12.948073 9.385686 9.828878 8.261094 NA 7.416373 10.638108 11.407374 14.233128 4.556552 14.375990 8.964054 8.438287 8.609018 6.659643 10.097145 6.301509 6.040068 10.133700 8.618646 5.609019 10.654193 5.621841 6.043027 12.727866 10.834053 11.020529 8.165798 8.678180 10.848446 6.755860 11.067498 9.578096 10.619046 9.822643 10.698374 9.989634 10.685070 10.491661 9.562383 NA 9.912499 8.195654 12.634751 8.018409 11.629204 10.117379 10.679331 10.585071 6.714552 14.168700 10.375783 11.188603 12.636924 10.188064 NA -1.198262 9.945046 10.008067 9.590381 TCGA-BH-A209 77 1 3959 NA breast stage i t1c n0 m0 female 1996 NA NA medullary carcinoma 0 black or african american not hispanic or latino NA NA 4 3 1 2 7 4 1 2 5 1 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.629947e-06 6.589149e-07 10.6060606060606 74.2424242424242 0 12.1212121212121 3.03030303030303 10.741505 9.249730 11.863967 9.224257 8.886358 10.416144 8.879122 10.135187 8.788368 8.283694 10.717617 10.897592 3.197598 10.926618 1.943846 9.821776 6.156293 9.112997 9.617356 12.627310 4.197598 13.495847 7.799910 9.302748 11.196873 4.174143 NA 12.796379 11.323055 2.943846 8.660201 6.706928 NA 6.443076 9.769414 10.259167 9.620614 10.319551 9.570956 10.890862 11.549750 10.558270 13.672745 7.858702 8.659145 11.315369 10.333185 4.024763 NA 9.293933 10.276827 -1.756818 10.863165 6.031307 8.400751 5.880029 9.864540 11.814327 10.898934 11.252882 13.412467 7.735257 10.841456 10.005370 11.621699 10.973874 4.150292 12.095933 10.657825 -1.756818 10.553732 10.373974 4.974314 6.690487 11.315536 10.231733 10.533999 10.966211 9.186651 6.644283 12.045314 11.664548 10.087717 8.748223 0.5875700 0.3533200 0.0897060 0.1092100 -0.0998680 -0.0760120 1.4162000 0.0523830 1.2308000 0.1067200 2.2838000 0.1468200 -0.0663860 0.1338700 0.1338700 0.1338700 0.0580060 0.0580060 -0.3175100 -0.0881600 -0.0641060 -0.2692500 -0.2692500 0.1547200 0.8412000 0.2688400 -0.2645600 0.0000000 -0.1351000 -0.0012473 0.3390100 0.0924600 -0.2073400 -0.1077500 -0.3556700 -0.3556700 0.9865900 0.0523830 0.0336900 0.1365800 0.1153600 -0.5532700 0.8190300 -0.3052700 -0.3052700 -0.2524900 -0.0663860 -0.1030300 0.1338700 0.1338700 0.1338700 0.1376100 0.0580060 0.1523300 0.1523300 -0.3297100 -0.0881600 -0.0754780 -0.0641060 -0.2851300 -0.2692500 -0.2692500 -0.3060900 -0.2599800 -0.2645600 0.1478600 -0.0168410 -0.4597100 -0.5037000 0.000 0.000 0.134 0.134 0.000 0.000 -0.330 0.000 0.000 -0.285 -0.285 -0.269 -0.115 -0.239 -0.239 0.180 0.180 -0.135 0.403 0.000 0.000 0.000 -0.504 0.000 0.000 0.000 0.000 -0.108 -0.108 -0.356 -0.356 0.194 0.194 0.000 0.000 -0.447 0.990 -0.267 -0.267 0.181 0.078 0.000 0.000 0.134 0.134 0.000 0.000 -0.330 0.000 0.000 -0.285 -0.285 -0.269 -0.115 -0.239 -0.239 0.180 0.180 -0.135 0.403 0.000 0.000 0.000 -0.504 0.000 0.000 0.000 0.000 -0.108 -0.108 -0.356 -0.356 0.194 0.194 0.000 0.000 -0.447 0.990 -0.267 -0.267 0.181 0.078 8.2699271 -0.7565746 4.4133301 9.6680948 11.4531616 7.0671848 10.4403131 9.8751083 7.6000095 2.9438463 12.8163407 11.2570753 2.8872523 -0.7565746 2.9982858 8.0920266 4.7191396 11.1719220 11.7994307 11.2893339 8.7007844 7.1137682 8.3791128 9.7074389 9.0826073 5.6946156 2.0507455 NA 11.6468152 5.0115896 6.5426109 9.2434037 4.1741427 9.1916322 10.9494679 5.7979935 8.2034058 -0.7565746 8.2891631 11.9450350 7.9798059 5.9016151 -0.7565746 2.4913400 8.4208230 1.2434254 1.4133233 -1.7568184 8.5160333 3.2877973 5.3519286 10.7110092 NA 6.1917699 10.4079964 10.8241333 6.0826068 10.8652266 15.1635820 8.7442455 6.9610804 5.5380259 10.0483414 1.4133233 NA 1.0507455 -0.7565746 13.151280 7.063583 8.649609 10.926618 10.206860 11.205938 12.627310 10.992016 9.454075 10.793669 13.117761 12.200596 9.293933 8.182983 3.669673 8.210630 11.508872 10.2381107 11.4065816 6.6612565 12.9165360 9.0337523 8.6538550 9.5299615 9.1214545 9.4154435 8.6216984 6.9507623 10.7176166 4.9158268 1.2434254 10.7309925 5.0378215 8.3291285 9.7155868 11.4275041 10.6110914 8.8691126 10.0611867 10.1903099 10.0833948 10.8581963 9.6206143 10.5610989 10.4248666 11.0757004 8.9167128 11.0743149 10.4292083 9.1313858 -0.1716934 9.5537211 7.5869223 10.2768266 10.7803793 10.8631651 9.7566377 10.7445218 9.8645398 7.9593656 14.8659846 10.8168142 11.0278340 12.2582087 10.1939596 8.4516381 4.5077502 10.2946126 9.9878171 9.6940995 TCGA-BH-A28O 50 0 NA 1120 breast stage iiic t3a n3 m0 female 2010 NA yes infiltrating lobular carcinoma 14 white not hispanic or latino NA NA 3 5 NA NA 3 3 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.387189e-07 7.14285714285714 85.7142857142857 0 7.14285714285714 0 10.4352148 9.4455239 11.4207732 9.1342094 8.4845587 8.8536969 10.7109658 9.6815482 11.2763833 12.4926823 11.3926336 10.3665488 2.7267005 12.8938449 3.3641382 10.7647101 7.2778797 9.4485642 10.6107065 11.1438549 3.5109746 12.3808443 8.1770004 9.8564809 10.1902300 5.2847029 NA 11.3518056 7.8876977 3.0803507 9.1152013 7.9555244 3.2572219 5.0803421 9.9544552 9.6976103 9.5160581 11.0128783 9.8467995 11.2424054 7.2221167 9.3633301 15.3145222 8.3264861 10.0012779 11.0197940 10.9833075 6.3116684 0.5567972 8.7254528 12.9598592 0.8786861 11.0463777 6.2149913 6.5454649 4.5340616 9.8685289 11.9200941 10.3944086 12.7169672 12.7019167 8.0385799 10.7487651 10.9364974 10.9848790 11.4860390 4.8235660 11.2006368 11.8789904 1.3641241 10.4614152 8.7014389 5.5801455 5.8876983 10.7717068 9.9421038 10.6594125 9.0852348 5.2292072 9.6587563 13.1057229 13.7392913 9.9725224 10.2375796 0.03574900 0.12035000 -0.00152430 -0.00152430 0.00000000 -0.00152430 0.00027728 0.00027728 0.00083195 0.00083195 0.00083195 -0.00622860 0.00000000 0.00013863 0.00013863 0.00013863 -0.00290910 -0.00290910 0.00138680 -0.00166290 0.00097064 -0.00097017 -0.00097017 -0.00097017 0.00319100 0.00319100 0.00264070 0.00055459 0.03574900 0.03574900 0.00013863 -0.00152430 0.00000000 0.00000000 -0.00152430 -0.00152430 0.00027728 0.00027728 0.00027728 -0.00719580 -0.00733390 0.00083195 0.00110930 0.00110930 0.00110930 0.00110930 0.00000000 0.00000000 0.00013863 0.00013863 0.00013863 0.00013863 -0.00290910 -0.00290910 -0.00290910 0.00138680 -0.00166290 -0.00166290 0.00097064 -0.13523000 -0.00097017 -0.00097017 0.01251600 0.00319100 0.00264070 0.00055459 -0.00373950 -0.00097017 -0.00097017 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.0243862 -1.4433989 6.5735896 11.4604742 11.5479481 9.0212446 11.0506360 9.6739302 8.8124584 4.7267059 11.4267599 10.9117214 4.4147647 1.5567972 5.1113694 8.1304280 4.0803421 10.5461751 11.1970255 10.1820328 8.9437209 5.2847029 8.1970255 10.8241525 7.2914903 8.0223467 -0.4432028 -1.4433989 10.9953126 7.0446203 7.9788454 7.6809017 9.7813853 11.2036632 10.1080082 6.2847010 9.1464317 -1.4433989 9.0017955 13.5471948 9.9613899 8.5095217 -1.4433989 4.9997250 8.1285331 0.8786861 6.0803421 3.0162110 4.9830438 5.4292410 4.6653075 10.1970256 -1.4433989 9.7416559 10.5135198 9.5131567 6.1492370 10.0905970 11.2658644 8.2467786 2.6442485 4.0486373 10.7103327 -0.4432028 2.6442485 1.5567972 4.0803421 12.3012455 4.3641382 8.5833040 12.8938449 10.5160581 10.0486337 11.1438549 11.8599905 9.0984482 10.5369202 13.4205797 12.7196439 8.7254528 8.1417429 0.5567972 8.0059293 10.4659237 11.579495 11.860133 6.207832 13.794023 8.641589 8.060606 9.424831 7.107528 10.360242 7.576371 7.849102 11.392634 7.542623 5.991408 10.737001 8.214992 6.434587 12.044872 10.388484 10.208729 8.428686 9.352009 10.318332 6.528324 11.631668 9.516058 10.366549 9.806487 11.349571 10.741966 9.748457 10.742275 8.422514 NA 9.861845 7.625344 12.959859 8.898855 11.046378 6.222117 11.749536 9.868529 6.771100 14.637119 9.920368 10.585032 12.671824 10.935888 1.364124 2.141727 10.214546 9.578455 10.114244 TCGA-BH-A28Q 46 0 NA 1119 breast stage iib t2 n1a m0 female 2010 NA no infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 2 1 2 3 4 4 4 3 6 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.080784e-07 38.0952380952381 9.52380952380952 4.76190476190476 33.3333333333333 14.2857142857143 10.90874259 10.33510436 12.07229549 10.30057278 8.42793170 9.60956125 10.55006510 9.28343034 9.84877487 8.22497504 11.75798113 10.48724837 5.15385397 13.28244366 4.42369245 9.86253539 7.65635550 8.34634042 11.33806222 13.18766859 2.96849631 13.75979427 6.72510991 9.47656072 11.06568264 6.68672882 NA 10.76522003 9.15065411 2.26222266 9.01430368 8.43951967 -1.98564471 4.26223018 10.22983675 10.75787599 10.70277267 11.41971116 10.11233589 12.02788814 4.16405413 11.17527814 14.86361111 8.43368475 10.03840106 11.97999787 11.83478191 4.26223018 4.38934654 9.54568521 11.43044152 NA 11.22330012 5.99729692 5.80871968 4.67251586 9.83008733 12.08299807 10.77044305 13.95321712 13.14036288 8.04220984 11.17779623 11.08999680 11.60594300 11.61653864 5.50615760 12.10912372 12.91002104 NA 10.14165337 9.40070528 3.33515450 5.29042809 11.11266489 10.00794979 10.42289891 9.92269634 0.01435529 9.09312173 13.50239494 12.80658569 10.29304360 9.64092545 1.10650000 1.23240000 0.00124810 0.00124810 0.02132300 0.07159400 -0.02370300 -0.57011000 0.07527100 0.07527100 0.07527100 -0.01560400 -0.01560400 -0.01367700 0.52293000 0.54083000 -0.03939400 -0.00705760 -0.49402000 -0.01064600 0.03622900 -0.05778900 -0.05778900 -0.05778900 -0.00664320 -0.00664320 -0.00664320 0.58775000 -0.05725700 -0.00484610 -0.05035300 0.00124810 0.02132300 0.02132300 0.07159400 0.06441600 -0.02370300 -0.57011000 0.00013863 0.07254000 0.05997100 0.07527100 -0.01064600 -0.01064600 -0.01064600 -0.05153900 -0.01560400 -0.01491600 -0.01367700 -0.64434000 -0.59409000 -0.63121000 -0.00705760 -0.00705760 -0.00705760 -0.49402000 -0.01064600 -0.01064600 0.03622900 -0.71623000 -0.05778900 -0.05778900 0.00208050 -0.00664320 -0.00664320 0.59512000 -0.01491600 -0.07747800 -0.07747800 0.000 0.000 -0.594 -0.594 0.000 0.000 -0.494 0.000 0.000 -0.143 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.106 0.595 0.595 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 -0.594 0.000 0.000 -0.494 0.000 0.000 -0.143 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.106 0.595 0.595 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3215047 NA 5.0029905 10.4538750 11.5270442 6.7842409 11.9070363 9.0672929 8.1370541 2.8216490 11.5357815 11.3740190 2.6581658 0.5992226 4.0366704 8.8699510 3.4066183 10.0269283 11.3073443 11.4456708 9.4252849 4.2041251 7.7130084 9.7519736 6.5260563 3.4405669 0.3362834 NA 11.2589649 5.6216329 7.1589621 8.1149661 6.1792105 10.4474927 10.9367023 4.8087197 8.4321564 0.8216286 8.2310498 13.2464248 8.1703868 6.5220981 NA 0.8216286 8.7532405 0.3362834 3.2622377 -0.9856447 4.5061576 5.4604772 2.8722772 10.4186470 NA 8.8038373 10.7587172 9.9424520 6.0586975 8.7633352 11.7805221 8.4572471 1.5992702 3.1017677 12.2035106 1.3362263 NA 2.5992702 2.2622227 13.360278 3.769190 9.644116 13.282444 9.758297 11.041000 13.187669 12.449518 10.017702 11.330698 13.930276 11.282700 9.545685 9.437420 1.599270 7.204128 11.859206 11.41531655 11.62832337 7.35415415 13.70754377 9.15577225 5.95681870 9.25211119 8.29159113 10.53263479 6.42369413 7.97285633 11.75798113 4.82165920 0.01435529 11.51837787 9.91366061 6.31241287 12.84511604 9.93837402 10.73476177 9.23518375 7.70430208 12.84184496 5.64365997 12.01636894 10.70277267 10.26608200 9.29739206 11.58889730 10.03389455 10.49811950 10.80485590 9.08106581 -1.98564471 8.74692070 8.21996275 11.43044152 5.37185504 11.22330012 7.38499091 10.69611313 9.83008733 7.73198014 14.20592208 9.87577837 9.62993340 13.27441472 10.77002589 -0.40068221 3.92815236 10.72854928 10.95608498 9.77793105 TCGA-BH-A2L8 45 0 NA 612 breast stage iia t2 n0 (i-) m0 female 2011 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 6 2 4 4 4 3 6 2 0 0 0 0 0 0 6 0 0 0 0 0 4 0 4 4 0 0 0 0 0 0 0 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 9.606285e-06 3.81477e-06 6.09137055837564 85.2791878172589 1.26903553299492 5.83756345177665 1.52284263959391 9.6741193 9.4577363 11.5495678 8.3515572 8.6498288 9.5545691 10.0614780 9.7500519 10.2144500 11.6256141 11.2929112 10.3459977 8.7054700 12.4503529 2.7697717 9.8210426 7.5662284 8.1674929 8.6601065 12.8091140 6.4584722 12.3374179 4.0136856 9.9685974 10.3166565 7.6119469 1.9812682 11.6759738 10.3223300 0.1067503 8.7542555 6.8661303 NA 3.5218297 9.4569995 9.7245706 9.8014452 11.6034844 9.7104233 10.0850308 7.8233309 10.7098052 14.9475586 8.3162340 10.4533108 11.1845029 10.4610464 5.6511177 2.1067838 8.2867061 11.8625192 NA 10.2127055 6.7839294 7.2326406 5.9812659 10.2675089 11.9671081 11.1947018 12.3124885 12.6178908 8.2188020 10.8661305 10.2145895 10.6336223 10.6440154 4.1656869 11.3805926 11.4885202 -0.4781452 10.5122931 8.8727737 6.3928154 6.5330618 11.1103150 10.3459977 9.9919849 9.2420787 2.1067838 7.8095469 13.1049761 13.3656575 9.9930016 9.6613858 0.32012000 0.31771000 -0.00277070 -0.00277070 -0.00912860 0.31851000 -0.00429290 -0.00429290 -0.00484610 -0.00484610 -0.00484610 0.00249690 0.00249690 0.00027728 0.00027728 0.00027728 -0.00040737 -0.00040737 -0.00650500 0.00152550 0.00791750 0.01391100 0.01391100 0.01391100 0.02104300 0.02104300 0.02104300 0.01126100 0.00527490 0.00527490 -0.00083160 -0.00277070 -0.00912860 -0.00912860 0.31851000 0.31851000 -0.00429290 -0.00429290 -0.00429290 -0.00401620 -0.00498440 -0.00484610 0.00291330 0.00291330 0.00291330 0.00291330 0.00249690 0.00249690 0.00027728 0.00027728 0.00027728 0.00027728 -0.00040737 0.00000000 0.00000000 -0.00650500 0.00152550 0.00152550 0.00791750 -0.32228000 0.01391100 0.01391100 -0.00013862 0.02104300 0.02104300 0.01126100 0.00360760 0.02020300 0.02020300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.322 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.312 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.319 0.319 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.322 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.312 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.319 0.319 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6626645 0.1067503 5.1067964 10.6139310 11.5344591 7.4565277 10.9748479 8.7695602 9.3346617 3.5662307 12.3400172 11.6082362 4.3798150 3.6092940 2.2222791 8.5852296 5.8705620 12.2377965 11.2046097 10.4595762 9.6879976 2.9141435 8.3211164 10.4723904 8.3720214 7.1217469 3.5662307 -1.4783462 10.3340119 6.1656909 6.7650082 8.2343614 5.8347163 10.3225929 10.0954817 4.8256177 8.9730455 2.3291810 7.6917596 13.2016994 7.8771853 6.9975679 NA 0.8437427 8.5005451 2.4287320 3.1656869 3.1068006 8.0116824 7.0341409 6.0216796 10.7400950 -0.4781452 7.0609931 10.4894210 9.9312255 7.0687288 10.3412154 14.0735428 9.9354624 6.7410031 5.1217490 10.4894210 3.8437628 NA NA 1.8437427 12.198570 5.566228 8.314625 12.450353 10.220973 10.693637 12.809114 11.352944 9.448679 10.173783 13.071318 11.171764 8.286706 8.799122 2.106784 7.001614 10.220105 11.1869483 11.9458696 6.6407756 13.6309290 8.6664800 8.4044774 9.0754639 8.4105777 9.9362291 8.6677666 7.2933236 11.2929112 7.5358547 0.5218548 10.0335872 5.2083339 7.1733164 10.9851035 10.6345998 10.4147568 8.8780224 9.2100849 9.8837783 7.6741195 10.8251929 9.8014452 10.6303590 10.0537033 11.2448554 9.4136182 10.2463483 10.4683753 8.4672783 NA 9.9288155 8.1278324 11.8625192 8.1030349 10.2127055 6.5932970 11.0028771 10.2675089 7.1442891 14.6208535 10.3527458 10.4562625 12.6457134 10.9985807 7.1180243 1.5218548 9.9919849 9.7632218 9.1755752 TCGA-BH-A42T 75 1 320 NA breast stage iia t2 n0 (i+) m0 female 2012 NA no infiltrating lobular carcinoma NA black or african american not hispanic or latino NA NA 1 2 3 2 1 1 3 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.427581e-07 20.6896551724138 17.2413793103448 3.44827586206897 24.1379310344828 34.4827586206897 9.00758797 8.97415098 10.74794421 7.67894444 8.62639387 8.84612470 8.91251215 9.35097387 10.77705850 10.93523210 12.72849669 9.87725775 -0.06476658 14.29456986 1.93523342 10.91965054 6.53514471 8.34886003 9.98553430 12.38179851 1.52019593 14.29278409 6.51517627 9.59455023 11.09468302 5.13163064 1.15762585 11.46058977 9.87039709 2.05071064 8.48212667 6.96129456 NA 2.25716152 8.56458852 10.01382763 8.98508055 9.49365274 9.08667153 9.53638380 3.20825192 10.02357861 14.21860988 5.94354865 9.72585207 10.13162935 10.19536753 5.28100826 5.59819844 8.56458852 9.61529858 NA 10.55880879 4.95018377 5.39466504 6.11845317 10.00176988 11.94260984 10.92059969 11.29058320 12.26624229 9.97460818 10.90940763 10.34400412 10.73208286 10.15923371 5.47955394 11.20416389 12.39338233 -1.64972908 10.40859957 9.36846979 4.02495790 5.62639533 10.74151317 9.81021349 10.48758101 9.13490449 0.67219902 7.84011763 13.07403717 11.80122305 9.71768430 9.01204762 0.7100800 1.3609000 -0.7070800 0.6792300 -0.0165850 0.0965750 0.0254390 -0.0210700 0.7113900 0.7113900 0.0217920 0.0328940 0.0328940 -0.6864800 1.6438000 0.0677110 -0.0407050 0.0081049 -0.0108080 -0.7062700 0.0637020 -0.6736700 0.7697100 0.7697100 0.0637020 0.0637020 0.0637020 0.0723030 -0.6809200 -0.7384200 0.0744580 -0.7070800 0.0352900 -0.0333580 0.0000000 0.0000000 0.0254390 -0.7488800 -0.0137670 0.0127030 -0.7254100 0.6960300 -0.7073500 -0.7073500 -0.7073500 -0.6638900 0.0328940 0.0328940 -0.6864800 -0.6813700 -0.6918900 -0.6843000 0.0107510 0.0081049 0.0081049 -0.0108080 -0.7019300 -0.6922100 0.0512950 -0.6709100 -0.6736700 0.7697100 0.0088010 0.0637020 0.0637020 0.0723030 0.0129830 -0.6508700 -0.6508700 0.000 0.000 -0.686 -0.686 0.000 0.000 0.000 -0.702 0.000 0.000 -0.671 -0.674 0.000 0.000 0.000 0.000 0.000 -0.681 -0.001 0.000 0.000 0.000 -0.651 0.000 0.000 -0.660 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.684 -0.684 0.000 0.000 -0.708 -0.708 -0.164 -0.164 0.000 0.000 -0.686 -0.686 0.000 0.000 0.000 -0.702 0.000 0.000 -0.671 -0.674 0.000 0.000 0.000 0.000 0.000 -0.681 -0.001 0.000 0.000 0.000 -0.651 0.000 0.000 -0.660 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.684 -0.684 0.000 0.000 -0.708 -0.708 -0.164 -0.164 8.8816512 8.6676821 7.0541734 11.8558331 11.9527365 8.4240495 11.3088223 6.9465344 10.0989949 NA 12.5523169 11.8232130 3.3044672 1.3502709 2.2571615 7.3864428 3.7765357 9.1878976 10.8099573 10.6721977 8.8481215 4.5000180 7.8441251 10.4610791 6.9538961 7.6217325 -1.6497291 1.1576258 9.8061105 3.5201959 6.6170560 8.5301788 5.7165931 12.4694069 10.0688025 4.7596619 10.6942881 NA 6.2571596 12.1185573 9.5082480 8.1736367 -1.6497291 6.3218127 8.5264429 NA 3.9649808 -1.6497291 4.7765357 5.6721990 2.5201959 11.6795053 -1.6497291 5.8014794 10.5110865 9.8360990 4.3726387 9.4930148 11.1941906 8.4627092 2.1576258 3.7078229 11.2724823 2.1576258 NA -0.6497291 1.5201959 14.544846 7.515176 7.922022 14.294570 9.655761 11.541175 12.381799 10.135722 9.183974 10.381971 13.260303 12.479231 8.564589 10.235585 4.232914 8.267642 11.329337 10.8408698 11.8135385 6.1704479 13.5090366 8.2344400 5.8580631 8.9631380 9.8649836 9.4510435 7.8580643 5.4270865 12.7284967 8.8501156 0.6721990 8.9778034 7.3131660 7.3979390 9.8330776 8.9557490 9.5627660 6.7638975 9.4834117 10.0253445 4.9941271 11.1748286 8.9850806 10.0794654 9.9649795 11.5195683 10.2695054 10.1656528 9.8204201 6.8933015 -0.6497291 9.0086508 5.6144301 9.6152986 3.8097025 10.5588088 4.3726387 10.6307504 10.0017699 7.6654191 13.5558720 9.8918502 9.6851015 12.7218421 12.0428851 0.3502709 -0.6497291 9.7425870 8.4337490 9.1487415 TCGA-BH-A42U 80 0 NA 3364 breast stage iia t2 n0 m0 female 2004 NA no infiltrating lobular carcinoma NA black or african american not hispanic or latino NA NA 3 3 4 3 3 3 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-07 3.467973e-08 16.6666666666667 16.6666666666667 0 66.6666666666667 0 9.1982282 8.5623710 10.6946765 6.0353666 8.9166656 8.6043875 9.8083427 9.4471802 12.3136374 12.2989583 11.2219299 10.2048512 1.5275708 12.9848888 2.6150396 11.6188421 8.2520859 9.0123949 10.4067723 11.6298758 NA 12.7351965 8.4071551 10.1574249 10.5331966 3.4344681 NA 12.6013479 8.7431049 0.8495189 8.7382433 6.7707458 -1.4723291 4.3604626 9.0393246 9.1946835 9.1999974 9.7345863 8.7849600 10.1541937 8.1274847 9.5609950 14.9894671 6.0897375 9.9112655 10.0144070 9.8612864 6.1274847 5.4464349 7.5609954 12.1369816 0.8495189 10.6100538 5.8036972 5.8494989 3.6150396 9.2949288 11.7790544 10.5909671 12.0062153 11.9497682 8.9166656 10.4144117 10.4817684 10.1641966 10.3240172 4.8129756 10.8296397 10.9297847 -0.4723291 10.6735041 8.6030510 3.1125333 4.3349258 11.1434315 9.2520859 10.1298069 8.2791161 5.4344614 9.5623710 13.8297111 13.4030334 9.5485520 9.9844398 -0.00193990 -0.00193990 0.00638710 0.00047400 -0.06316600 0.00291330 0.00013863 0.00013863 0.00115250 0.00115250 0.00287010 0.00298200 0.00298200 -0.00138580 0.00354290 0.00354290 -0.00041585 -0.00041585 0.00152550 -0.00069303 0.00610900 -0.00723950 -0.00723950 -0.00723950 0.08594300 0.08594300 0.08854800 -0.00249380 -0.00193990 -0.00193990 0.00249690 0.00638710 -0.06316600 -0.06245500 0.00291330 0.00291330 0.00013863 0.00013863 0.00013863 -0.00484610 0.00000000 0.00115250 -0.03721800 -0.03721800 -0.03721800 -0.03721800 0.00298200 0.00000000 0.00208050 0.00354290 0.00354290 0.00097064 -0.00041585 0.00346870 0.00346870 0.00152550 -0.00069303 -0.00069303 -0.03142900 -0.08505900 -0.00124730 -0.00723950 -0.09102300 0.08594300 0.08594300 -0.00249380 -0.00097017 -0.09340300 -0.09340300 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.8359111 6.6150351 7.2791165 11.6858661 11.5685466 8.3875573 11.2988551 8.2371899 9.7183351 5.4344614 12.3424549 11.1097705 4.1999942 3.2824546 1.3349115 7.6823900 4.5048492 11.0838386 11.1078306 9.8635205 9.4314539 4.6150337 8.2314756 10.9031545 8.1496237 7.9026115 -0.4723291 NA 10.7937729 6.1569285 7.3187353 7.3824407 9.2563429 11.5600500 9.6288911 5.6256037 9.6262621 -1.4723291 7.9705155 13.4001507 9.0204266 9.7315317 0.5275708 1.9869934 8.0550492 1.6975070 5.2824583 9.4374652 6.6619989 5.1714270 4.9538379 10.5087825 5.4223911 10.0472083 10.6587859 9.4223899 6.9327132 10.1605672 11.5071759 7.2690388 2.5275708 4.5499402 10.1059448 -1.4723291 0.8495189 -0.4723291 4.1999942 12.607549 5.097430 8.105001 12.984889 10.325639 10.316698 11.629876 10.848936 8.992118 10.067700 13.603845 12.970062 7.560995 8.390209 1.527571 8.082161 9.647810 10.991096 11.960244 4.812976 13.428003 8.948585 7.989052 9.240958 6.682391 9.423125 8.074466 8.576059 11.221930 7.070604 2.697507 9.573332 6.844984 6.363875 10.955932 10.282459 9.859049 8.098794 10.302771 5.334926 7.299061 11.829497 9.199997 10.793480 10.132588 10.544728 10.412887 9.350143 10.090768 6.308932 NA 9.629948 7.069250 12.136982 8.545772 10.610054 5.707481 11.542116 9.294929 6.789667 14.638687 10.014407 10.460525 12.373160 11.064062 4.593659 NA 9.218443 8.683655 9.000263 TCGA-BH-A42V 41 0 NA 635 breast stage ib t1c n1mi m0 female 2012 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 3 3 2 2 3 3 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 1.040392e-07 16.1290322580645 45.1612903225806 0 32.258064516129 6.45161290322581 9.9495254 9.0507871 11.4714061 8.4154671 8.5637759 8.5868946 10.8725489 9.4530996 11.1937153 12.9593660 11.1616279 10.3145472 2.2194938 13.3481590 3.0268355 10.3912822 6.7272752 8.8091311 10.3723984 11.7798127 2.2194938 13.1712655 6.0586845 10.1763497 10.6814709 6.9059802 NA 9.1278726 8.3095923 0.8044666 9.2929522 7.0203800 1.5414157 4.7740701 9.7902843 9.5492762 9.5186880 11.7450007 10.0755163 10.9210030 10.0883025 11.5139571 14.9874574 7.5163044 10.6415447 10.9952959 10.4617609 5.6203606 5.7586390 8.4956044 11.6454825 -1.7804133 10.5907120 6.1910237 6.1502164 4.1021206 9.7346869 11.9126401 10.5498366 12.0804699 12.7327757 8.0444389 10.5742803 10.6943899 10.9577833 10.9835222 4.9473997 11.4639924 12.2178940 NA 10.4727365 9.3253884 4.6305686 5.1021248 10.6901388 10.0859861 10.3135576 9.3513368 4.1263700 7.6267479 13.6398349 12.8964287 9.9072930 9.7692646 1.2481e-03 3.3299e-03 4.3859e-05 2.2193e-03 4.8057e-05 2.0903e-02 1.7996e-01 1.2093e-01 3.9065e-01 3.9065e-01 4.1078e-01 4.1593e-04 9.7064e-04 -3.6810e-02 -3.6810e-02 -3.6810e-02 -3.1496e-02 -3.1496e-02 1.2237e-02 -1.1060e-02 -2.2168e-03 -1.2989e-02 -1.2989e-02 -1.2989e-02 -2.7707e-03 -2.7707e-03 -2.7707e-03 3.5383e-02 2.9781e-03 2.9781e-03 -4.1585e-04 2.2193e-03 5.6919e-03 -4.2752e-04 2.0903e-02 2.0903e-02 1.7996e-01 -3.6340e-01 -3.6306e-01 -7.8863e-03 -1.4916e-02 -3.7067e-01 -2.5072e-02 -2.2881e-02 -2.2881e-02 -2.2881e-02 9.7064e-04 9.7064e-04 -3.6810e-02 -3.6810e-02 -3.6810e-02 -3.6810e-02 -3.1496e-02 -3.1496e-02 -3.1496e-02 1.2237e-02 -1.1060e-02 -1.0646e-02 -1.2473e-03 -3.5407e-01 -1.2989e-02 -1.2989e-02 2.2193e-03 -2.7707e-03 -2.7707e-03 3.5383e-02 -3.4359e-02 4.9966e-02 4.1317e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.145 -0.209 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.357 0.000 0.000 -0.352 0.038 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.145 -0.209 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.357 0.000 0.000 -0.352 0.038 0.000 0.000 0.000 0.000 8.518688 4.026835 5.750861 11.508058 11.791943 8.226914 11.690647 9.111423 9.344712 4.594519 12.116853 11.173507 4.774070 3.173671 3.678917 8.031657 3.467410 9.971024 11.164375 10.040058 9.396276 3.891905 8.391907 10.501410 7.389405 7.428933 NA NA 10.600482 7.374298 7.147258 8.023611 8.520976 11.649865 9.696732 4.241848 9.376195 -1.780413 7.766375 13.486852 9.593976 8.733208 -1.780413 4.150218 7.952495 NA 5.089846 2.026835 6.514100 5.532364 4.428933 10.516396 2.611786 9.696226 10.875458 9.517542 6.191024 9.735672 11.124867 8.700270 2.743041 4.306940 10.676861 2.611786 -1.780413 NA 3.219478 12.223330 4.743041 8.784582 13.348159 10.412389 9.887035 11.779813 11.786366 9.330955 10.204610 13.060061 11.929318 8.495604 8.111263 1.026800 7.850657 10.327024 11.2409805 12.0587821 5.6952144 13.1086017 8.5847089 7.2390705 9.0929241 7.4400037 10.3163334 7.4043556 8.2936215 11.1616279 7.3175121 5.9337261 10.1450344 7.7950195 6.5554956 10.7779006 10.0507872 10.0657538 8.0836660 9.3583916 10.5298087 7.0364638 12.0606344 9.5186880 10.8504296 10.2959615 10.8163685 10.6056118 9.8401579 10.3577517 8.3641382 -0.1956160 9.6904691 7.0065987 11.6454825 7.7213173 10.5907120 5.7272752 11.2852326 9.7346869 6.9199895 14.5992475 10.1583244 10.6420704 12.3333035 11.1502173 3.0774652 0.5414157 10.0606511 9.5048821 9.7783789 TCGA-BH-A5IZ 51 0 NA 567 breast stage iib t2 n1a cm0 (i+) female 2012 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 4 NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.803346e-06 5.201959e-07 14.9253731343284 25.3731343283582 5.97014925373134 28.3582089552239 25.3731343283582 8.0778417 8.4448505 11.8464133 8.3356798 8.8981582 7.8416757 10.6826731 10.5832157 12.7818677 12.9710332 11.3827755 10.0326830 -1.2643045 12.4206250 2.4362152 12.5683602 7.3056222 8.0933188 9.2145365 9.1869779 NA 9.3805245 7.4738591 9.6236500 10.2903557 4.7801631 -1.2643045 9.8285240 11.3910740 2.4362152 8.8880516 7.7329462 NA 3.3207302 9.3477137 10.2937091 9.0822805 8.9919756 10.1594081 10.5863444 NA 9.6207006 14.8267269 7.9552256 10.0042737 10.1792285 9.6184099 3.4362018 2.8232398 9.2236069 8.8931137 NA 11.1698738 4.0211688 4.2903580 8.5527505 7.9181614 12.0198680 9.7329463 11.6303952 11.9377376 8.8637613 11.4877293 11.2285239 10.3742028 10.8585949 3.6426554 11.3034853 6.4222666 2.0576929 10.3467916 9.2425704 4.6785170 4.2276179 11.0226133 10.5635065 11.2727425 8.8508104 -0.2643045 5.3056240 12.8415117 12.0722734 9.4457122 10.7991620 1.0268000 0.8532400 -0.6111400 0.1966400 -0.6315000 2.3005000 -0.5719000 0.9845200 0.0654920 0.0654920 0.1219600 -0.1021100 -0.0926600 0.0000000 -0.5414900 0.2412400 0.9865900 -0.6266500 1.0793000 -0.6119100 0.2122300 -0.6229300 -0.6229300 1.0176000 0.1715400 -0.2192300 -0.3622700 0.0993840 0.2035000 -0.6233100 -0.5998300 -0.6111400 -0.6315000 -0.6315000 -0.6222900 -0.6222900 -0.5719000 0.9845200 0.1823800 1.0464000 0.1571100 0.0607940 1.7386000 0.1360800 0.1360800 -0.6225500 -0.0069195 -0.0069195 -0.0666540 -0.5414900 -0.6020600 -0.6020600 0.9865900 -0.6266500 -0.6266500 -0.6325400 -0.5776300 -0.6317800 -0.6706700 -0.6417400 -0.6229300 -0.6229300 0.0849320 -0.6033200 -0.3622700 0.1566600 0.1108100 -0.5974000 -0.5974000 -0.128 -0.128 0.000 -0.602 0.987 -0.466 0.182 -0.632 -0.627 -0.642 -0.642 -0.427 0.196 -0.491 0.159 0.172 -0.048 0.151 0.151 0.000 0.000 0.111 -0.597 0.197 -0.402 -0.461 0.150 -0.631 -0.631 0.000 -0.614 0.224 0.966 0.145 0.145 0.000 0.000 0.136 0.136 -0.267 -0.267 -0.128 -0.128 0.000 -0.602 0.987 -0.466 0.182 -0.632 -0.627 -0.642 -0.642 -0.427 0.196 -0.491 0.159 0.172 -0.048 0.151 0.151 0.000 0.000 0.111 -0.597 0.197 -0.402 -0.461 0.150 -0.631 -0.631 0.000 -0.614 0.224 0.966 0.145 0.145 0.000 0.000 0.136 0.136 -0.267 -0.267 8.9044389 -1.2643045 6.8442915 11.7918965 12.6989339 6.0989374 11.9868054 8.0895093 8.3528852 NA 13.1559903 11.2187941 1.9056975 NA 3.1952058 8.5670742 3.7801631 8.9919756 11.7669511 11.0778415 9.7065917 -1.2643045 8.7343574 11.4192001 5.2593290 1.0576929 5.9549361 NA 10.4952390 -0.2643045 9.2246112 7.6724048 5.8337984 10.8993788 10.0927689 -1.2643045 9.7657442 5.1620328 5.4081922 11.7605602 7.3018208 7.8931140 -1.2643045 0.7357821 7.4772337 4.1620328 1.5430999 NA 3.0576929 2.2250589 5.0211688 11.4362066 7.5527505 8.5527505 10.6264111 9.3805245 3.9452238 8.9354391 10.6475333 7.3094136 2.6426554 3.3207302 10.6779148 2.0576929 0.7357821 1.5430999 7.1108059 12.128932 8.831164 8.048650 12.420625 10.675346 11.529980 9.186978 11.435556 9.023802 10.912252 13.110535 12.064161 9.223607 7.954936 -1.264305 8.381425 10.262266 11.1137907 12.3036041 9.0856010 13.8520292 9.0257857 3.1952058 8.8018561 9.1630798 9.2179294 5.7691899 5.8125829 11.3827755 11.7815265 1.9056975 9.8650498 8.2135252 8.6771812 11.9687873 10.0599474 9.7469941 7.7413915 10.4495829 7.9717809 4.6184090 8.8714248 9.0822805 10.0423982 10.1291573 11.8848788 11.9952159 10.5995660 9.8981582 8.3467916 NA 10.1760547 10.8304944 8.8931137 5.1451598 11.1698738 6.2514673 10.6854695 7.9181614 7.4568661 13.0371916 10.9044389 10.0101450 11.8303394 11.8727580 2.5431246 -0.2643045 9.0153774 9.1227071 8.3393931 TCGA-BH-A5J0 63 0 NA 715 breast stage ia t1c n0 m0 female 2012 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 1 NA NA 4 4 3 8 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.595268e-06 3.121176e-07 19.2982456140351 54.3859649122807 5.26315789473684 7.01754385964912 14.0350877192982 8.4487259 8.7216122 10.7357952 6.5768063 8.6300858 8.7436146 10.1287098 9.6139660 10.8184533 12.9595871 11.1794595 10.1739723 NA 12.1830581 1.2122580 10.8232580 5.0801289 7.7420541 10.3202349 12.4085895 NA 13.3671779 6.7790482 10.3664286 10.1646833 6.7911720 NA 13.4387658 11.1194243 -0.1096701 8.9883373 6.6584900 NA 4.5050144 9.0526966 9.6410122 8.8357488 10.2555340 9.1986442 9.7529426 7.5768055 10.0652309 14.6996713 6.5116246 10.7892844 9.6782077 9.1606006 4.2826251 5.3332484 7.7451735 10.2451054 -1.1096701 10.6079816 8.3741209 6.0092464 5.7482868 8.9537003 11.7815192 10.8426824 11.5128146 11.9069393 8.7866375 10.1382326 9.3670512 10.0664783 10.0627326 2.4752665 11.9069393 10.9098959 2.0602204 10.5807397 8.2826224 1.4752925 5.3660389 10.3786474 8.6267071 9.3640110 8.5732995 3.2122269 8.8225198 12.9371733 11.7106836 9.0602301 9.9968680 0.476670 0.664010 1.742500 0.428220 0.221480 0.055943 -0.522460 0.331410 3.656900 -0.144380 0.251190 0.070530 0.070530 -0.061152 -0.061152 -0.061152 0.109640 0.109640 -0.096044 0.281840 0.304090 -0.479230 -0.479230 -0.479230 -0.115040 -0.115040 -0.174740 0.304250 -0.110770 -0.110770 -0.094196 -0.528490 1.385300 -0.231530 0.055943 0.055943 -0.529400 -0.145150 0.331410 0.203200 -0.111820 -0.897480 0.035242 0.035242 0.035242 -0.104470 0.070530 0.369860 -0.376280 -0.061152 -0.418570 -0.498190 0.109640 0.109640 -0.106680 -0.518870 0.127560 0.127560 0.234950 -0.519690 -0.479230 -0.479230 -0.529540 -0.072942 -0.115040 0.304250 -0.768000 -0.498920 -0.498920 0.000 0.000 0.000 0.000 0.110 0.110 -0.101 0.128 0.304 0.480 0.000 -0.479 -0.479 -0.526 -0.526 0.000 0.000 -0.111 0.366 0.304 0.304 -0.762 -0.499 -0.557 -0.557 0.276 0.428 -0.063 -0.246 0.000 0.000 -0.145 0.186 0.010 -0.502 0.252 0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.110 0.110 -0.101 0.128 0.304 0.480 0.000 -0.479 -0.479 -0.526 -0.526 0.000 0.000 -0.111 0.366 0.304 0.304 -0.762 -0.499 -0.557 -0.557 0.276 0.428 -0.063 -0.246 0.000 0.000 -0.145 0.186 0.010 -0.502 0.252 0.252 0.000 0.000 0.000 0.000 9.5242085 8.4275236 6.8091687 11.3904001 10.9896529 8.6117633 11.5310020 7.0278087 10.2776602 2.4752665 12.3885311 12.4917649 3.9777653 3.2122269 0.4752925 7.3207581 5.9015331 11.9940847 11.4475295 9.6410122 9.0247313 4.0195863 7.6011119 10.8636438 8.0040474 6.3415162 -0.1096701 NA 10.3640108 5.2122347 8.3039332 8.3290971 6.6518568 11.8750191 9.3081577 4.1757082 9.7008768 NA 6.4525477 12.1029535 8.0425902 8.9790933 NA -1.1096701 8.3102651 2.4752665 5.7606707 0.8903299 6.5123565 8.2077177 3.7971998 11.0829062 0.4752925 6.7357956 10.4897531 9.4611096 5.8675852 10.7160590 12.7474114 9.7436148 3.2826177 5.9237292 9.5680247 3.5341612 NA 2.2122269 3.0602377 12.801868 5.901533 8.351785 12.183058 10.189513 11.005674 12.408589 11.774285 8.992976 9.827679 12.547512 9.723986 7.745173 9.440090 5.175708 6.576806 9.918211 10.641012 12.788623 5.333248 13.555468 8.888895 6.918211 8.347686 7.019589 9.779155 8.343576 9.234601 11.179459 8.606267 2.349733 10.011191 5.265343 7.023498 9.278322 10.107051 10.516014 7.417782 9.683909 5.576806 5.671664 11.695743 8.835749 10.704888 10.176285 10.622048 9.586403 9.734226 10.012486 6.382159 NA 9.677816 7.123925 10.245105 5.194087 10.607982 6.562731 10.789662 8.953700 7.203188 13.688828 10.987020 10.417782 11.712478 10.894877 2.697663 1.212258 8.955048 9.406005 8.668382 TCGA-BH-A6R8 46 0 NA 293 breast stage iia t2 n0 m0 female 2012 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 1 4 2 1 1 1 4 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6181212 9.1770961 11.1323459 7.3131923 9.6605565 9.4567994 9.9763217 9.4729976 9.6419887 14.4869586 10.5178162 10.3982597 NA 12.9670280 1.6345003 8.3908650 7.3982597 7.3502656 7.3533127 12.1194288 1.4645637 13.4960980 2.1650115 10.4582257 10.5123747 8.5171371 1.6345003 11.9079012 9.3593868 NA 9.0746711 6.6041203 NA 2.7864918 9.9807615 9.2319260 7.8066437 11.1706333 9.1941898 10.3544533 0.7865127 11.5517004 13.5740733 7.9219088 10.8955442 10.7331111 9.7266640 3.8568861 6.3953062 7.8568867 11.3563528 -1.5353317 10.2410021 5.2847473 5.7499713 4.8739608 9.2102435 11.4140311 10.6450999 10.1111278 11.9495178 10.1160693 10.8330756 10.1697695 10.3919767 10.0201168 4.7864970 10.3357043 10.6906802 NA 11.4523660 8.7254886 2.9691965 5.0191592 10.3322340 8.4173103 10.7825469 9.4317953 0.7865127 9.2807527 12.6906049 10.1676074 10.5228991 9.5021159 1.1564000 1.7547000 -0.0151910 -0.0127130 0.0000000 0.6099100 1.1502000 -0.0052610 0.6010800 0.6010800 0.6085900 -0.0257560 -0.0257560 -0.0238400 -0.0238400 -0.0238400 0.6965200 0.1370200 -0.7055000 -0.0210980 -0.0353120 -0.0402090 -0.0402090 1.1266000 0.0274970 0.0274970 0.0274970 1.6869000 -0.0507760 -0.0048608 -0.0011087 -0.0151910 0.0000000 0.0000000 0.6155600 0.6357300 1.1502000 -0.0052610 -0.0052610 0.7629300 0.7591000 0.6010800 0.0758470 0.0758470 0.0758470 0.0758470 -0.0257560 -0.0257560 -0.0238400 -0.0238400 -0.0238400 -0.0238400 0.1370200 0.1109600 0.1109600 -0.6608700 -0.0210980 -0.0239770 -0.0353120 -0.0547430 -0.0639720 -0.0323140 0.5836300 0.0274970 0.0274970 0.6236900 -0.0286280 -0.5183500 -0.5183500 0.000 0.000 0.000 0.000 0.137 0.137 -0.661 0.000 0.000 1.087 1.087 0.000 0.000 0.584 0.584 0.000 0.000 0.000 1.191 0.624 1.687 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.610 0.610 0.000 0.000 0.763 0.763 0.601 0.601 0.000 0.000 0.186 0.186 0.000 0.000 0.000 0.000 0.137 0.137 -0.661 0.000 0.000 1.087 1.087 0.000 0.000 0.584 0.584 0.000 0.000 0.000 1.191 0.624 1.687 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.610 0.610 0.000 0.000 0.763 0.763 0.601 0.601 0.000 0.000 0.186 0.186 8.8385217 -1.5353317 4.6344945 11.5062282 12.3031821 7.9183952 11.6820725 7.1243871 9.9025812 1.2719037 10.6870622 12.6717947 7.5225611 6.1084262 1.9239858 7.5360311 3.2719186 11.5561698 11.1977963 10.7377819 9.6231788 4.3472121 8.0476518 10.2775486 6.3163177 2.7864918 1.2719037 NA 9.8049756 4.1369952 4.6344945 8.1192052 7.2194570 10.7543085 9.7295980 1.9239858 8.8824217 NA 6.8439474 10.5724400 8.9949754 6.9763212 -1.5353317 4.3953096 9.4114754 4.1369952 1.0495611 -0.5353317 4.8739608 5.8416939 2.7864918 10.0820366 3.1084241 4.8044202 11.1843857 9.7172345 4.1084241 8.9969251 14.1950392 7.2815527 2.6345003 4.0792757 11.9187398 2.1650115 NA -0.5353317 3.8221183 12.4913856 4.5089610 8.8308913 12.9670280 8.9372599 11.4839861 12.1194288 11.1093267 8.7706309 10.1663087 12.6831323 8.0588939 7.8568867 10.4993681 -0.5353317 7.4216710 10.8973720 10.8913580 12.3881751 7.3037725 12.4851966 8.2622306 5.4979923 8.8675811 7.6543933 9.6807087 6.8132976 9.1147233 10.5178162 7.6319875 0.4645637 9.4012070 3.6344887 8.7810203 7.9920461 9.9629197 10.3521705 10.2063984 9.7231351 10.5413846 5.7406928 11.1933229 7.8066437 11.1790293 10.0889076 10.3627926 9.2557320 9.6975895 10.4461364 7.9054382 -1.5353317 9.8888772 4.4356553 11.3563528 5.0191592 10.2410021 5.4645703 10.5905314 9.2102435 6.4191731 12.2235210 10.5450536 9.9969249 12.1112403 10.3291422 3.6740199 -0.5353317 9.5553432 9.2144386 9.0095336 TCGA-BH-A6R9 61 0 NA 160 breast stage iia t2 n0 m0 female 2012 NA no metaplastic carcinoma NA white not hispanic or latino NA NA 3 3 1 2 5 5 4 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.9228579 9.7412364 11.1481867 8.7697787 8.1854890 8.8521662 6.8069775 10.7288290 11.0074702 9.2886520 10.0689182 10.4132040 0.7037209 10.9757359 1.8736164 10.8291029 6.1549011 8.7603271 8.9180087 6.4451572 1.2886539 8.2447862 2.6105820 9.9325081 5.3761132 2.6105820 NA 12.7453717 9.8135200 5.0960088 8.4468410 10.8854629 -1.2961905 5.4585756 9.7149167 9.8767419 9.5254635 9.2331199 9.1875052 10.6210615 3.1631284 4.9131431 15.8444194 8.8610618 10.0188390 10.7277902 10.8477103 4.1955445 -0.2963677 8.8984463 11.6381175 -1.2961905 11.5324210 6.0165721 7.0346064 6.7751520 10.7491078 11.5120504 10.4396684 12.6058761 12.5303372 9.0852324 10.8965987 10.9380968 10.8303939 10.8361892 4.6105820 11.3193191 10.5836555 0.2886539 11.0882034 8.9468633 3.2928554 5.8736139 10.9355107 10.1487043 10.3211569 9.3063883 1.2886539 5.9798127 13.7824657 11.9905359 9.3565345 10.2365323 0.1538200 0.1538200 0.0064543 0.1563600 -0.0164290 0.1562100 -0.0440090 -0.0440090 0.0000000 0.0000000 0.0000000 -0.0491540 -0.0491540 -0.0013858 -0.0013858 -0.0013858 -0.0206870 -0.0206870 0.1456300 0.1523300 -0.0633010 -0.0087146 -0.0087146 -0.0087146 0.1331700 0.1331700 0.1331700 0.1432500 -0.0796090 -0.0796090 -0.1161300 0.0064543 -0.0164290 -0.0164290 0.1562100 0.1562100 -0.0440090 -0.0440090 -0.0440090 0.1553200 0.1553200 0.0000000 0.1377600 -0.4402700 0.1518800 0.1518800 -0.0491540 -0.0491540 -0.0055375 -0.0013858 -0.0013858 -0.0013858 -0.0206870 -0.0206870 -0.0206870 0.1456300 0.1523300 0.1484600 -0.0633010 -0.0062569 -0.0087146 -0.0087146 0.1432500 0.1331700 0.1331700 0.1405500 -0.0922130 0.0074737 0.0590800 0.000 0.000 0.000 0.000 0.000 0.000 0.146 0.152 0.000 0.000 0.000 0.000 0.000 0.143 0.143 0.133 0.133 0.000 0.154 0.142 0.142 0.000 0.000 -0.116 -0.116 0.000 0.000 0.000 0.000 0.156 0.156 0.000 0.000 0.155 0.155 0.000 0.000 0.138 0.138 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.146 0.152 0.000 0.000 0.000 0.000 0.000 0.143 0.143 0.133 0.133 0.000 0.154 0.142 0.142 0.000 0.000 -0.116 -0.116 0.000 0.000 0.000 0.000 0.156 0.156 0.000 0.000 0.155 0.155 0.000 0.000 0.138 0.138 0.000 0.000 8.1712949 NA 7.0612416 11.0933208 10.8701664 6.2692875 9.9844602 10.7672665 8.8858852 -1.2961905 13.2661704 12.4269493 1.0255958 NA 4.5365814 8.3636854 4.7911525 12.0063284 11.3668028 10.4101855 8.6314674 2.4041402 8.2924040 10.2763897 7.2773367 5.8635619 4.9704764 0.7037209 10.4660715 2.0256313 7.8017213 7.9774849 5.6225526 9.6163768 9.3330460 4.1955445 9.0601414 NA 8.5190728 12.3311093 8.1834696 8.3091689 0.7037209 1.2886539 7.2035350 0.2886539 6.8017213 -1.2961905 5.7036904 3.5616683 4.4850468 10.7072073 5.4718735 10.7058012 10.5078205 10.0205366 7.6866833 10.1167884 13.0542834 9.8023795 3.0256136 5.6578858 10.1870014 3.7480855 NA NA 3.6105820 12.1631403 6.7093141 8.0278701 10.9757359 10.1098945 10.0023249 6.4451572 11.2311664 8.7589720 10.5928131 13.4553904 10.7967768 8.8984463 8.7684321 0.2886539 7.2811186 10.4430482 12.0215260 12.1605572 2.0256313 13.2900584 8.6090764 7.4451564 8.6270169 7.3036027 9.9511779 8.8291030 6.6636919 10.0689182 6.2961472 -0.2963677 10.5353925 7.7260574 7.1815290 13.7432940 10.1310023 10.6611543 8.1362314 9.7232802 9.7487665 7.0256180 10.9061255 9.5254635 10.9736927 9.6636913 9.6417987 12.1041687 10.3261989 10.2645000 8.6299853 NA 10.3428041 7.9751527 11.6381175 8.1067016 11.5324210 9.2389647 10.6644155 10.7491078 6.6923742 13.9814127 9.9331092 10.2881823 12.5855681 11.3291700 1.0255958 0.2886539 9.5198731 9.7239749 9.4718737 TCGA-BH-A8FY 87 1 295 NA breast stage ia t1c n0 (i+) m0 female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 1 2 2 4 1 3 4 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.4762302 9.1342191 10.9323894 6.8571599 9.0370214 8.8222260 10.3893991 8.9747593 9.1969247 9.8836634 8.8275202 9.9188120 1.7347421 12.5914481 3.1497959 8.7736822 6.8363016 8.1582295 8.6255342 13.0254540 3.9046864 13.5528127 7.2425577 11.0571721 10.6933158 7.4535818 NA 9.0491575 12.8751669 0.7347421 6.6966950 6.0923153 NA 2.9571531 8.5844289 9.7663495 10.0023301 11.6176609 9.4558623 10.4299914 4.8777197 11.8413261 13.9812564 8.0181295 9.7129969 10.3822216 10.1996492 5.0324447 1.1497796 7.5718656 11.1032696 -0.8502204 11.0585686 2.1498121 4.5760625 3.9046864 9.6184248 12.3136076 11.2399131 12.1306543 12.7938823 8.5399695 10.4095439 10.2465158 10.5739669 10.5948155 3.8502394 11.5581304 10.6664856 NA 10.0967070 8.2451976 4.1985570 4.6092349 10.1526157 8.9409637 10.0278515 8.9130129 1.7347421 9.7562059 12.2456921 11.2027083 9.9952907 10.1039969 0.91561000 0.87308000 -0.01697900 -0.01697900 -0.01202400 1.69380000 -0.01285100 -0.01285100 0.00000000 0.00000000 0.00000000 0.00513590 0.00513590 0.01307400 -0.00013862 0.88866000 -0.00013862 -0.00013862 -0.91875000 0.00249690 0.00805670 0.00903120 0.00903120 0.00903120 0.01266900 0.01642500 0.01642500 0.02216400 -0.00263220 -0.00263220 -0.00995650 -0.01697900 -0.01202400 -0.01202400 1.62150000 1.62150000 -0.01285100 -0.01285100 -0.02037900 -0.00871460 -0.00691950 0.00000000 0.00541390 0.00541390 0.00541390 0.00541390 0.00513590 0.00513590 0.01307400 -0.91725000 -0.92354000 -0.92354000 -0.00013862 -0.00013862 -0.00013862 -0.91875000 0.00249690 0.00249690 0.00805670 -0.95145000 0.00903120 0.00903120 0.01712400 0.01266900 0.01642500 0.02216400 0.01488800 0.02244400 0.02244400 0.000 0.000 0.000 0.000 0.000 0.000 -0.919 0.000 0.000 0.000 -0.915 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.823 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.618 1.618 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.919 0.000 0.000 0.000 -0.915 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.823 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.618 1.618 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.2279514 NA 6.8432879 11.7704787 10.6204595 9.0439514 12.6643914 7.9946634 9.5045459 NA 11.9627801 11.4316815 4.3592541 2.4717337 4.2372654 7.6889594 4.3197263 10.7635901 10.5765896 10.8597461 9.3506992 8.4784756 8.2077923 10.0626900 6.2372635 6.6174058 3.3977345 0.7347421 10.5447992 5.9699793 2.8502394 7.0686644 4.9571578 11.3604233 10.2339447 7.9013448 9.4130698 NA 6.8292813 13.0455653 10.7295879 8.9360702 2.9571531 2.1498121 8.6966950 6.2790831 3.4717337 0.7347421 0.7347421 7.1098025 2.6092349 10.3303315 -0.8502204 7.4851909 10.6767889 9.7375781 4.8222254 10.5421180 10.5999809 7.5927441 4.3977277 3.2372578 12.9275697 2.7347638 -0.8502204 3.6733642 -0.8502204 13.896474 5.194193 8.738515 12.591448 9.359254 10.973566 13.025454 12.524704 9.642065 9.439819 12.422868 7.853704 7.571866 9.766350 1.957172 7.887893 10.497422 10.6046140 12.3571201 5.5927441 14.4814514 8.6376208 2.7347638 8.5802533 8.4142434 9.4739813 7.2842272 5.7791573 8.8275202 7.9245875 NA 10.2874322 8.9030175 7.3785714 8.8979936 8.7589793 10.2700385 6.6416544 9.3774166 10.5128403 1.1497796 12.9416320 10.0023301 10.7663495 9.5431912 10.7612866 9.2739219 9.4535814 10.4558624 6.6655008 NA 8.7679659 6.9507005 11.1032696 1.7347421 11.0585686 0.1497796 11.4421223 9.6184248 7.2842272 14.9791518 10.5660704 9.8606072 11.7406216 10.3402427 NA -0.8502204 10.1206255 9.4352029 10.2057609 TCGA-BH-A8FZ 58 0 NA 574 breast stage ia t1b n0 m0 female 2012 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 2 2 3 3 4 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.712925 9.076137 11.068256 9.061467 8.108334 9.600333 10.400084 9.730864 11.508056 11.407019 11.142511 10.002431 1.748590 14.014638 4.106139 10.437708 6.918509 8.712925 9.492577 11.366969 4.392441 11.203654 7.782007 9.362355 10.005972 5.191527 -1.251539 12.609984 10.900552 4.174846 9.050080 7.828069 1.748590 5.462828 9.939643 9.921011 8.895789 10.526661 9.517595 11.461326 11.243689 9.401429 14.979974 7.632052 11.231888 11.269203 10.703144 5.503473 2.748590 8.705686 11.909873 NA 10.661847 5.908455 7.913491 5.363294 9.625101 11.795196 10.351283 12.371093 13.127421 7.056923 10.109979 10.050074 11.103935 11.046360 5.070514 11.056354 11.971681 -0.251367 10.370636 9.671168 4.248110 6.406795 9.519248 10.095098 11.675806 9.600333 4.748585 8.981005 13.797837 13.895192 9.680799 9.033986 -0.00429290 -0.00083160 0.00148460 0.00430210 0.00124810 -0.00373950 -0.23496000 -0.23496000 -0.33964000 -0.33964000 0.33286000 0.00013863 0.00013863 0.00055459 0.00055459 0.00055459 0.10818000 0.10818000 0.01293400 -0.00152430 -0.00762300 -0.02192100 -0.02219500 -0.02219500 3.60410000 -0.03463100 -0.03463100 0.00513590 -0.02651500 -0.00429290 0.22746000 0.00360760 0.00124810 0.00124810 -0.00373950 0.25652000 -0.24764000 -0.23496000 -0.23496000 0.04925600 0.04925600 -0.33964000 -0.32843000 -0.00013862 -0.00013862 -0.02629500 0.00013863 0.00013863 -0.33445000 0.00055459 -0.33722000 0.00499690 0.10818000 0.32173000 -0.25914000 -0.33237000 -0.00152430 -0.00152430 0.00000000 -0.34446000 -0.36136000 -0.02219500 -0.33306000 -0.38325000 -0.03463100 0.00055459 -0.00013862 -0.02288100 -0.02288100 0.000 0.000 0.000 0.000 0.108 0.108 0.000 0.000 0.000 -0.023 -0.344 -0.339 0.000 0.000 -0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.235 -0.235 0.000 0.000 -0.007 0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.108 0.108 0.000 0.000 0.000 -0.023 -0.344 -0.339 0.000 0.000 -0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.235 -0.235 0.000 0.000 -0.007 0.333 0.000 0.000 0.000 0.000 8.1537253 -0.2513670 5.5034728 10.7172507 10.9789046 8.3047834 10.8243972 10.2429045 8.8021295 4.7258611 13.1000063 11.1841708 3.4490198 2.7485900 4.9774036 7.4210095 4.2080178 10.3041317 11.2618180 10.5051402 9.0466466 2.0705267 8.1579749 10.3838486 8.7258638 6.3484962 -0.2513670 -1.2515388 11.0781000 7.0247086 7.7114798 7.9433406 11.1497300 10.8219556 9.2141503 5.3924411 9.2494257 0.7485471 7.9008686 12.8932421 9.2464356 7.6554742 3.1408932 5.0153682 7.7027801 NA 5.0339868 1.0705267 6.9185091 4.5814718 4.5034696 10.2959605 0.7485471 8.8830101 10.3674282 9.1915274 6.0973116 10.5401538 13.3061074 9.6486959 4.1748458 5.1409013 11.5429997 1.5559143 2.2080178 0.3335382 2.4490331 12.385974 5.782007 8.786131 14.014638 10.172225 10.257864 11.366969 11.253155 8.980465 10.715810 13.720083 13.046790 8.705686 7.228364 1.918501 7.854493 9.659976 11.440981 12.183473 6.631227 14.327751 8.667447 7.725864 8.449024 7.989375 9.762458 8.445551 7.539747 11.142511 7.070512 2.996515 10.904035 6.820046 6.973791 11.614124 10.718690 10.352674 7.822725 8.724432 11.317015 8.185295 11.685590 8.895789 10.627401 9.822056 10.935008 10.459390 10.144653 10.559959 8.528303 -0.251367 9.348701 9.620043 11.909873 7.836047 10.661847 6.216189 11.638848 9.625101 7.381688 14.209584 10.262311 10.218226 13.205259 10.435960 6.503471 2.070527 10.107784 9.809280 9.238432 TCGA-BH-A8G0 54 0 NA 662 breast stage iib t2 n1a m0 female 2012 NA no infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 3 3 2 2 3 3 4 3 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.4454011 9.5042352 11.5593888 8.9485144 8.4889078 9.3871691 10.8439677 9.6594747 10.6628934 10.9499145 11.3350843 10.2749177 3.1100124 13.1287519 1.9400916 11.0122184 6.7214451 8.5418567 8.9666093 12.2272210 4.8227301 12.9907848 7.0275489 9.8323858 10.1562253 5.7082700 -1.0597957 11.2223055 8.7490502 0.5250666 8.6832371 7.6439896 NA 4.5250478 9.8544709 9.8469764 9.8522267 11.4053971 9.7863598 10.5278633 6.3830286 11.4828759 15.0726458 8.4074467 9.9101916 11.0904678 10.6857602 5.5982967 2.1099957 8.6107421 11.6775444 NA 10.2620139 6.4399323 7.1446572 5.9513127 9.8250195 11.6722533 10.5179866 12.2911631 12.8466007 8.6577622 10.7721847 10.6869192 11.1040499 11.0716213 4.8469746 11.3237901 10.8443441 0.5250666 10.3700156 8.7634531 5.0087558 6.3237898 10.5441757 9.8019482 10.3866522 9.3248695 4.5839402 9.6300838 12.9229012 13.2315443 9.8833332 10.1018475 0.02946600 0.26232000 0.00055459 0.00055459 -0.00027724 -0.00097017 -0.00263220 -0.00263220 0.00097064 0.00097064 -0.00083160 0.00277450 0.00277450 0.00000000 0.00000000 0.00000000 -0.00020757 -0.00020757 -0.00609040 0.00083195 0.00263570 0.00027728 0.00027728 0.00027728 0.00027728 0.00027728 0.00027728 0.00791750 0.02946600 0.02946600 -0.00027724 0.00055459 0.00722170 -0.00027724 -0.00097017 -0.00097017 -0.00263220 -0.00263220 0.00013863 0.00471900 -0.00612110 0.00097064 -0.00166290 -0.00166290 -0.00166290 -0.00166290 -0.32426000 0.00652620 0.00000000 0.00000000 0.00000000 0.00000000 -0.00020757 -0.00020757 0.00221930 -0.00609040 0.00083195 0.00083195 0.00263570 -0.17677000 0.00027728 0.00027728 0.00166420 0.00027728 0.00027728 0.00791750 0.00416320 0.00569190 -0.00235530 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.13237840 -1.05979566 5.53999936 11.07451213 11.12805640 7.73498933 11.53953379 9.40130941 9.20977355 6.11001029 12.37692747 11.65142156 4.61251174 4.49467161 5.00617682 7.60186362 4.14953578 10.56898698 11.33374439 10.57761633 8.90587013 4.64052839 7.93160742 10.63487901 8.87230058 5.33240361 -1.05979566 -1.05979566 11.14526814 7.32810312 7.33240361 7.55847123 8.02489420 11.23907625 10.20218065 6.03811788 8.77928960 0.52506659 8.79806672 12.93647104 9.94571040 8.42390167 -1.05979566 3.02754334 8.43193881 1.26201213 4.26201213 -0.05994604 6.14953984 5.67113199 5.06936706 9.92093949 0.94005396 9.35899266 10.32270987 9.51373292 6.15925377 10.23528081 11.37705757 10.09680092 2.26201213 5.02754777 11.45775520 1.26201213 -1.05979566 1.74743037 2.84697464 12.427839 4.188013 8.530673 13.128752 10.412269 10.236429 12.227221 12.475726 9.239786 10.455786 13.112591 11.486980 8.610742 8.585744 -1.059796 7.471467 10.612069 11.270443 12.171157 6.463647 13.597734 8.689955 7.740986 8.827306 7.362151 10.172003 8.711575 8.475361 11.335084 8.321629 3.027543 10.624396 7.668006 5.678314 11.657762 10.989934 10.289920 8.102477 8.855965 12.058054 7.654331 11.703226 9.852227 10.325409 9.718163 11.264829 10.480698 9.924504 10.388718 8.772976 -1.059796 9.928273 7.546380 11.677544 9.118751 10.262014 7.923080 10.903148 9.825020 6.962454 14.268914 10.020237 10.365826 12.545334 10.972132 7.252969 2.899852 9.920225 10.003481 10.134843 TCGA-BH-AB28 53 0 NA 287 breast stage iiia t3 n1a m0 female 2013 NA no infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 3 2 NA NA 4 4 4 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.0298896 9.2236342 11.0611740 9.4713594 8.6615722 9.3497262 9.8920561 8.8365371 10.5627717 12.5864315 11.2774408 10.1637383 1.9948331 14.1169642 3.6728892 9.6480190 4.9208173 8.2912729 10.8651804 12.7030374 3.4277805 13.6870388 7.4737877 10.1188593 10.4982439 2.7603487 NA 9.2245958 10.3802466 1.4802651 8.7995921 7.2616023 0.2578555 3.5308698 10.0413940 10.1546870 10.1173848 10.9956607 10.3759260 11.2892066 11.4005953 11.2873674 14.5682735 7.9386434 10.1752221 11.4458206 11.1979189 4.6270815 2.2578555 7.8944746 10.7676250 -1.3269864 10.6997567 5.5432515 6.4673039 4.1964497 10.3377792 11.7651492 10.8108393 13.1188723 12.9421603 8.9385025 10.8586921 10.7966339 11.0525367 10.6558811 5.0991521 11.7145467 11.4842622 -0.3271674 10.3431012 9.1199708 4.0723974 6.0038046 11.3029271 10.4810473 10.5665683 9.4185619 2.3733141 9.7924772 13.2507884 12.3999571 9.8340194 9.8565230 1.05780000 1.05780000 -0.00041585 -0.00470790 -0.00290910 0.03270400 0.00833510 -0.01222000 0.00055459 0.00055459 0.00055459 0.01572700 0.01572700 0.01810300 0.60413000 0.01474900 -0.00650500 -0.00650500 0.00000000 0.01251600 0.02862200 0.02272500 0.02272500 0.02272500 0.01782400 0.01782400 0.01782400 0.04386500 -0.54310000 0.00527490 -0.00124730 -0.00470790 -0.00290910 -0.01574100 -0.00546010 -0.00546010 0.00833510 -0.01222000 -0.01222000 0.00221930 0.00221930 -0.56684000 -0.55747000 -0.55747000 -0.55747000 -0.55747000 0.01572700 0.01572700 0.01810300 0.00360760 -0.56286000 -0.56286000 -0.00650500 0.01474900 0.01474900 0.00000000 0.01251600 0.01251600 0.02651400 -0.54784000 0.02272500 0.02272500 0.01754400 0.01782400 0.01782400 0.04386500 0.01167900 0.04287400 0.04287400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.053 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.567 0.000 -0.557 -0.557 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.548 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.053 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.567 0.000 -0.557 -0.557 0.000 0.000 8.6415543 3.3733280 5.6841146 11.3371126 11.7887440 8.0666855 11.7490351 8.8006754 8.7221097 1.8428180 12.4509646 11.0837920 2.7603487 NA 5.4410718 8.1220364 3.5797836 9.8725599 10.6788629 11.0611740 8.2408438 0.6729231 8.0015624 10.4689271 7.5494043 6.5432515 -0.3271674 NA 10.7755194 6.2949387 6.2653450 8.6241722 8.0435747 11.1300247 10.6154020 3.4802393 9.5714889 2.3733141 8.2616023 13.0861849 9.6792135 7.1846403 NA 3.7603487 8.3435437 3.8021725 3.9582859 -1.3269864 5.5432515 5.7240417 3.7603487 10.6622821 -1.3269864 8.0500979 10.6350606 9.9466831 6.0737667 9.3149391 12.1508987 8.6154020 3.5797836 3.2578555 12.6862102 1.4802651 NA -0.3271674 3.8021725 13.351149 6.352368 8.625629 14.116964 10.662991 11.239655 12.703037 12.096135 9.380186 10.758692 13.251555 12.059019 7.894475 10.229394 2.672878 7.034831 11.700794 10.784023 11.919628 7.686908 13.978163 8.919628 7.026034 8.710435 8.870104 9.454887 8.122036 6.555531 11.277441 6.661573 2.760349 11.202074 9.006043 7.497942 11.621437 9.828971 10.974098 8.125396 8.647302 12.547965 6.242743 11.538671 10.117385 10.164741 10.326180 11.373544 10.038116 9.328418 10.226997 7.994816 NA 9.563266 5.994815 10.767625 7.223634 10.699757 6.331100 10.451507 10.337779 7.457522 14.239061 9.350607 9.668655 12.992419 11.700102 6.684115 1.228726 9.943183 10.245114 9.642993 TCGA-C8-A12K 80 0 NA 0 breast stage iib t2 n1 m0 female 2010 NA NA infiltrating ductal carcinoma 1 asian not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 5 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.53162e-06 9.01673e-07 8.91089108910891 36.6336633663366 4.95049504950495 23.7623762376238 25.7425742574257 9.9201242 8.8422746 11.2768133 8.3932283 8.9817160 9.1168970 7.5101304 10.8524193 12.1273786 13.4155554 9.8629710 10.6789699 -1.6966576 10.8185694 1.7625614 10.6792413 8.4917048 7.8748683 10.4702204 6.8148683 NA 9.8069417 7.7522642 9.3184472 10.3254837 7.4011483 2.7625402 14.2924394 10.4879912 -1.6966576 8.6227880 7.4037781 NA 5.3799328 9.4181596 9.9233358 8.7314762 9.7465775 8.6759810 10.5957251 -0.1118510 7.5954373 14.3548559 6.8690941 9.1048244 11.0748117 9.8691700 3.3475098 NA 9.0225049 10.0538229 -1.6966576 11.0586294 6.1423195 7.9896165 6.8843171 10.0995611 12.2889578 9.7002557 10.2547649 12.7536828 5.9755408 11.5990283 11.1929792 11.4457017 11.3291206 4.6429672 12.2898468 8.0877508 -0.6968914 10.5569634 9.4298203 2.0090963 6.4168583 11.2683591 10.3644871 10.7162149 10.0022546 1.6250366 5.5415210 12.4944065 11.6351524 9.4655072 9.1383768 0.0690950 0.0468420 -0.4472800 0.2642000 0.6106300 -0.4745900 0.7358700 -0.4405900 -0.0873700 -0.0873700 0.7326500 0.6623500 -0.0644350 0.0668020 0.0334080 0.0334080 0.5620500 0.0829090 0.1067200 -0.4178400 0.4873300 0.0549450 -0.4776500 0.0030522 -0.0319050 -0.0417020 -0.0417020 -0.0280810 0.0227250 0.0781580 -0.4612500 -0.4472800 -0.0011087 -0.4546900 -0.4745900 -0.4540400 -0.4872200 -0.4405900 0.0995790 0.1180000 0.0556580 -0.0873700 0.2471600 0.2642000 0.2642000 -0.4760700 0.0520240 -0.4841800 0.0081553 0.0334080 -0.4326800 -0.4326800 -0.4345300 -0.4574700 0.0126550 -0.4003000 -0.4347400 -0.4435100 -0.4767000 -0.0020178 -0.5066000 -0.4776500 -0.0131270 -0.4671700 -0.0417020 0.0445740 -0.4383200 -0.0099724 0.5471800 0.000 0.000 0.000 0.000 -0.435 -0.435 0.000 -0.418 0.000 0.000 0.000 -0.507 0.000 0.581 0.581 0.000 0.000 0.000 0.000 0.000 0.000 -0.438 0.000 0.000 0.000 -0.447 0.155 -0.433 -0.433 -0.454 -0.454 -0.441 -0.441 0.000 0.000 0.000 0.532 0.153 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.435 -0.435 0.000 -0.418 0.000 0.000 0.000 -0.507 0.000 0.581 0.581 0.000 0.000 0.000 0.000 0.000 0.000 -0.438 0.000 0.000 0.000 -0.447 0.155 -0.433 -0.433 -0.454 -0.454 -0.441 -0.441 0.000 0.000 0.000 0.532 0.153 0.000 0.000 0.000 8.7839061 NA 4.4323983 10.4500028 11.6751647 6.9109269 10.0877507 9.1210908 8.9456911 NA 12.3133817 12.0200393 2.7625402 NA 1.4730595 9.1470370 5.3143449 12.3721460 11.6580539 10.3403197 9.5265143 4.0310334 8.8178301 10.8514562 7.0713004 5.6159989 -0.1118510 0.3031086 11.2382809 3.6250483 7.7604971 8.3998312 9.7788494 9.9711144 9.7994704 4.6068982 9.7413879 1.8880711 8.8148686 13.6771705 7.4830249 6.7707220 0.8880711 2.3905851 7.9541678 4.1360027 2.3905851 NA 7.6429658 2.7684384 5.3583998 12.1612912 -1.6966576 9.5052397 10.8892520 9.5563725 5.7460601 9.6137287 14.4650941 9.7645953 6.4629864 5.0445821 11.2232826 1.7625614 2.3905851 NA 7.7686826 10.956212 8.602324 9.068816 10.818569 10.360431 11.531784 6.814868 11.477417 9.184995 10.907783 12.713700 11.879482 9.022505 8.173481 3.826681 8.267457 11.224771 9.7589569 11.0540322 4.9324723 14.2268354 9.0671498 7.2485595 9.5581444 9.1755523 9.2699170 8.0445826 5.1486047 9.8629710 11.0329490 -0.6968914 9.8104150 5.7949694 9.9108716 12.3685321 11.3975236 10.1676890 8.0926493 8.8286367 8.9269975 7.6182658 11.0574105 8.7314762 10.5079927 10.1156943 12.0075599 10.1320457 11.0694378 10.0479497 8.0975318 NA 9.4352364 7.6353764 10.0538229 7.7849155 11.0586294 7.0513090 10.7556146 10.0995611 7.8059076 14.4947150 11.3330933 10.6000321 12.4393861 10.2846832 5.5885168 1.8128268 10.3247899 9.3234014 8.5331362 TCGA-C8-A12L 67 0 NA 363 breast stage iia t2 n0 (i-) m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 2 4 NA 1 1 2 6 2 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.768666e-06 3.81477e-07 16.9230769230769 12.3076923076923 3.07692307692308 47.6923076923077 20 10.163416 9.914648 11.373811 9.808507 8.809779 10.035439 9.287370 10.828737 12.223504 14.623051 10.158429 10.862860 0.247563 14.272532 3.306437 10.109141 5.684942 8.109658 7.671003 11.823234 NA 10.743059 1.469938 9.299444 9.989004 4.495465 NA 10.465898 12.603897 1.984516 9.149409 9.584415 0.247563 5.002423 10.313177 10.568337 9.369933 11.150163 10.406988 11.013513 7.220995 10.407408 14.791012 8.631975 8.453737 11.071435 11.768646 3.306437 4.277286 10.221951 11.068514 NA 10.989566 3.520561 5.984503 4.947975 10.879926 11.983939 9.215243 11.331681 13.322849 7.557392 11.392620 10.810628 10.821815 11.078052 4.872026 12.600316 9.299199 NA 10.512761 9.051668 3.569941 3.186136 11.512957 10.811369 11.034623 9.027803 NA 7.566456 12.581158 12.521527 8.190051 9.046279 1.2582000 1.7302000 -0.0292250 1.4363000 -0.3553700 0.2841600 -0.2670100 0.2195400 -0.0587800 -0.0587800 1.0497000 1.2852000 -0.4226900 -0.4414900 1.9019000 0.4165700 0.5889400 0.1430500 0.2371500 -0.0363150 -0.0582420 -0.5079800 3.3430000 0.4752300 0.9509200 0.2055900 0.1022900 1.0803000 -0.4865300 -0.0525810 -0.5698500 -0.4343500 0.3053100 -0.4506500 -0.4267300 -0.4182000 0.5365400 0.2195400 -0.6049100 0.4453900 -0.4870500 -0.9020100 0.2298100 -0.4556900 -0.4462900 0.6312800 -0.4055500 -0.4938600 -0.4596400 -0.0575690 0.0808360 0.0841560 0.6418800 0.1031700 0.0667490 0.3448000 -0.4378200 0.1850500 -0.4661400 -0.4684800 -0.5079800 -1.2929000 0.1833800 -0.5728200 0.0897980 -0.5177800 -0.0014367 0.2315800 0.3389500 -0.065 -0.406 -0.384 0.000 0.143 0.143 0.279 -0.429 0.000 0.249 0.249 -0.508 -0.124 0.183 0.183 0.104 0.000 0.000 1.241 0.352 0.352 0.000 0.339 0.000 0.000 0.350 0.350 -0.384 -0.384 -0.134 -0.418 0.231 0.231 0.253 0.000 0.000 0.000 -0.446 -0.446 0.378 0.378 -0.065 -0.406 -0.384 0.000 0.143 0.143 0.279 -0.429 0.000 0.249 0.249 -0.508 -0.124 0.183 0.183 0.104 0.000 0.000 1.241 0.352 0.352 0.000 0.339 0.000 0.000 0.350 0.350 -0.384 -0.384 -0.134 -0.418 0.231 0.231 0.253 0.000 0.000 0.000 -0.446 -0.446 0.378 0.378 7.8097791 NA 6.1220059 10.1332332 12.0615852 6.6632507 11.4650907 8.0463650 8.4795580 NA 13.7886738 11.6783012 2.4699381 -0.3373387 4.5694668 8.2568988 5.0888370 9.9788559 12.0077023 11.5607978 8.2362214 4.3630168 9.0751443 9.3913452 5.5080641 8.3225704 9.5009904 0.6625701 11.1024052 1.4699381 6.9754571 9.4883282 8.3064304 9.7143135 11.0239698 1.6625701 9.2652733 -0.3373387 8.6765946 12.3903885 8.0591790 10.5743408 NA NA 6.5933119 NA 2.2475326 4.5694668 4.7500383 2.5694668 2.3630028 11.9863328 3.1861360 10.5127612 10.3530089 10.2362215 4.0888370 10.5398585 13.3927260 7.5962651 1.4699381 4.1220100 10.3686386 2.1220100 -0.3373387 5.6738023 3.1220100 13.835705 7.891393 8.563441 14.272532 10.507280 12.327688 11.823234 9.300105 9.778918 11.133487 13.373704 10.950287 10.221951 8.990127 1.247563 8.849926 11.840617 11.9287752 12.2501175 5.7606069 14.6368309 8.4891230 4.9845028 8.8756784 7.6681986 10.4835750 5.6849421 5.3904957 10.1584293 3.9105024 NA 11.3091330 9.0709039 8.1923757 12.6120363 11.2456571 11.1491580 8.2955697 8.5143235 9.4970455 6.3349990 10.4844958 9.3699334 9.4787581 9.6021536 10.7209044 11.2130806 11.0586439 11.5423490 9.9287752 -0.3373387 9.6759599 6.6409419 11.0685136 7.1624205 10.9895655 6.3064300 10.6600255 10.8799263 8.3113274 13.3935220 9.8337511 10.2338530 12.9100569 10.8793202 -0.3373387 NA 10.5735917 10.7866957 10.1039623 TCGA-C8-A12M 70 0 NA 358 breast stage iia t2 n0 (i-) m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 1 1 1 NA 2 2 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.24847e-06 3.467973e-07 27.0833333333333 8.33333333333333 6.25 29.1666666666667 29.1666666666667 10.6594031 10.5598674 12.0641760 9.9112288 7.8762480 6.6483547 11.7145596 9.8630120 8.1756024 14.1712042 11.2008086 11.1032208 1.1014484 13.6069002 4.5933119 7.4634042 4.2713883 8.3659033 9.4301358 14.0525633 2.4233899 14.6965725 NA 9.3284389 11.7101776 7.6788895 0.6864333 8.1594526 9.3206293 3.8563483 7.9687394 5.6092556 1.1014484 6.2912849 10.2204018 9.7389914 10.2531117 8.9184444 10.0643568 12.1360878 0.1015156 11.0336755 13.9253255 8.8740887 10.6454592 11.6418310 11.6670389 4.9841017 8.2688788 9.7023029 9.5973157 NA 11.0180867 3.1014652 4.7738856 3.2713809 9.8036334 12.4154775 9.9671940 12.2798144 13.1193131 7.3060316 11.2294551 11.2851892 11.1144344 11.3160834 5.3493865 11.9926749 13.9322730 NA 9.5629401 10.3440394 3.2721875 4.0556555 11.4775862 11.5251019 12.2952941 11.6791256 NA 3.9088129 10.5908070 9.8462946 10.5797248 9.1809455 3.0159000 -0.7271200 0.1007400 0.1007400 0.0000000 0.0869560 -0.0438730 -0.3790900 3.6569000 2.0512000 2.0488000 0.0513870 -0.3256500 -0.3356000 3.0340000 -0.7396700 0.0291840 2.6777000 0.3572400 0.9618500 0.0322810 0.0813220 1.1182000 3.6569000 -0.2856000 -0.2856000 -0.2856000 0.3947900 -0.0686630 -0.0686630 -0.0875790 0.1007400 0.0000000 0.0000000 -0.7834500 0.2396900 -0.0291750 -0.3790900 -0.3790900 0.0286220 0.7226300 -1.1861000 -0.0126890 -0.7324000 0.3060100 0.3060100 -0.3256500 -0.3256500 -0.3356000 -0.6822300 -0.7396700 -0.7396700 0.0291840 0.0276380 0.8848600 -0.7418500 -0.2876200 -0.2819200 0.0137720 0.0685220 0.0813220 -0.2732000 0.3417700 -0.2856000 -0.2856000 -0.7307300 -0.0030475 -0.6998300 -0.6998300 0.000 -0.326 -0.336 -0.740 0.000 0.000 -0.742 -0.309 0.000 0.000 0.000 -0.277 -0.277 0.313 0.313 -0.286 -0.286 1.014 1.014 -0.718 -0.353 0.000 -0.700 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 0.000 -0.335 0.000 0.000 -1.186 2.024 0.000 0.306 0.265 0.265 0.000 -0.326 -0.336 -0.740 0.000 0.000 -0.742 -0.309 0.000 0.000 0.000 -0.277 -0.277 0.313 0.313 -0.286 -0.286 1.014 1.014 -0.718 -0.353 0.000 -0.700 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 0.000 -0.335 0.000 0.000 -1.186 2.024 0.000 0.306 0.265 0.265 8.6269815 6.4765000 4.3868661 9.4086616 10.7069402 6.1714210 10.8889553 9.6742083 8.3752563 1.4233630 11.7326378 12.4118605 2.9088129 3.4937754 1.9088129 9.1168757 7.1182694 9.5812411 11.4023853 12.3086277 9.7888364 0.1015156 8.6483551 9.4154775 10.8542595 NA 0.6864333 NA 10.2776339 8.5913088 7.7050870 6.9469507 5.0787422 10.3850180 10.1628320 2.6864333 7.8088201 NA 6.6406195 12.5935643 8.1782764 8.0816006 NA 6.6864235 7.7417056 NA 4.1014568 NA 6.2204015 5.5008021 3.3493936 9.7587792 NA 9.6741610 10.7569915 8.8344761 5.7453180 8.0643569 12.4546076 6.9656469 4.8018984 2.8019036 11.7837970 4.1014568 NA 3.1014652 1.1014484 15.6527396 5.2713846 8.9327681 13.6069002 10.6444925 8.7844552 14.0525633 15.6244713 8.0929828 11.1685589 14.1402512 11.7267130 9.7023029 7.3960815 -0.8986189 10.3157798 11.9072046 11.3212343 11.2259052 7.8860959 13.7287091 8.5670271 5.7738856 9.3740905 8.3705876 11.3142884 5.0787422 9.8019005 11.2008086 5.7879600 NA 10.0865911 4.3109145 7.6915237 10.1594525 10.5511253 10.6784174 7.9902038 8.2863360 10.3176003 6.7667966 11.4126074 10.2531117 10.2378111 8.8496537 11.3505742 9.4969949 10.7725595 10.8212774 9.3048088 -0.8986189 8.3931150 7.7453167 9.5973157 7.0614630 11.0180867 8.3109140 11.1981759 9.8036334 7.5023402 14.1989991 10.0128527 9.4927044 12.5599956 9.7800609 -0.8986189 2.2713958 11.0589256 10.0483670 10.3254624 TCGA-C8-A12N 58 0 NA 358 breast stage iia t2 n0 (i-) m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 1 1 3 NA 4 3 4 1 5 6 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 2.774378e-07 10 25 15 30 20 10.5066071 9.5998664 11.2191422 8.4524361 8.6679340 9.5810073 9.6051030 9.7733677 10.0088958 12.4994940 10.4644224 10.2356359 3.9371466 11.9424802 2.3896769 9.8010113 6.6021124 8.5030048 9.1649572 12.8852109 3.0111557 13.8750670 4.3896632 10.2707303 10.7756917 6.1649572 -0.3107903 9.9624365 10.6125511 1.6892097 7.1527483 8.2108242 NA 3.6892209 9.2524199 9.9682538 10.7349833 12.0544525 9.6764876 10.6990523 8.7499197 11.7463692 14.6822505 7.4684505 9.6103208 11.1833292 10.7559856 4.2438138 4.1486576 8.8042672 11.6229143 1.6892097 11.3178970 3.8591446 6.6199617 5.0111512 10.2661803 11.7692084 10.5760634 12.1319080 12.5915988 8.0290735 11.0571843 10.3595656 11.0533583 10.7267706 3.8986727 12.4760038 10.4205427 -1.3107903 10.5557299 9.3158454 3.4970886 5.8185055 11.3454250 10.0066363 9.8003593 10.2798107 3.1486576 8.4689429 13.0495221 11.6775533 9.7793361 9.6177420 -0.00170710 -0.00170710 -0.00629950 -0.00629950 -0.00830050 0.00958830 -0.00650500 -0.00650500 -0.74803000 -0.74803000 1.38420000 0.00680440 0.00680440 0.00000000 0.00000000 0.00000000 0.00041593 0.00041593 -0.00318590 0.00208660 0.01558700 0.01838300 0.01838300 0.01838300 0.02454800 0.02454800 0.02454800 0.01237600 0.02511000 -0.00170710 -0.00470790 -0.00629950 -0.00830050 -0.00830050 -0.00678130 -0.00678130 -0.00650500 -0.00650500 -0.00650500 -0.00064064 0.00083195 -0.74803000 0.00666530 0.00666530 0.00666530 0.00666530 0.00680440 0.01377200 0.00000000 0.00000000 0.00000000 0.00000000 0.00041593 0.00041593 0.00041593 -0.00318590 0.00208660 0.00903120 0.01558700 -0.73222000 0.01838300 0.01838300 -0.00683930 0.02454800 0.02454800 0.01237600 0.00819590 -0.03885000 -0.03885000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.693 -0.714 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.748 0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.693 -0.714 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.748 0.635 0.000 0.000 0.000 0.000 9.1383724 NA 5.7977471 10.7918556 11.3616490 7.9234903 10.5584319 8.7596665 9.2609762 0.6892097 11.4169314 11.3449780 4.0111557 3.0111557 2.7766936 8.4034693 4.2438138 11.1230699 11.3303722 10.4243565 9.7363476 4.4171436 7.9300152 10.3620909 5.2891373 2.2741722 4.1154911 NA 10.7455227 4.3896632 7.3258487 7.9952855 7.5221138 10.4309560 9.9186434 4.7766883 8.3258482 -0.3107903 7.5931057 12.5405823 9.0815410 7.6693634 -1.3107903 2.8591546 8.1424941 2.4965902 4.8790490 4.5472030 3.5472030 5.7374380 2.0111378 10.2652355 NA 6.9035433 10.4738585 9.5893358 3.8591446 10.0858284 12.7021973 8.4069001 2.2741722 3.5472030 11.2186542 3.6892209 -1.3107903 2.2741722 0.2741722 13.010598 4.389663 8.865397 11.942480 10.383233 10.357222 12.885211 12.180576 9.315845 10.305313 12.635399 9.344754 8.804267 9.369583 -1.310790 7.717129 10.817862 11.1107626 11.9486727 7.1280160 13.3667214 9.1070761 4.8790490 9.2206052 7.6199610 10.3294685 6.7226464 7.4771260 10.4644224 7.9132251 5.1970201 10.4901235 6.0467748 6.9131288 11.6271491 10.1679932 10.5549570 9.3697326 8.8313307 9.8268553 4.2127872 11.5937059 10.7349833 10.9014160 10.1337210 11.0260091 9.4154418 10.2438125 10.3062318 8.7032440 -0.3107903 9.2170133 7.7029089 11.6229143 2.5961241 11.3178970 8.5703377 10.9255369 10.2661803 6.3185808 14.0812056 10.4432760 10.6214384 12.7837137 10.4933546 -1.3107903 1.0111378 10.1850787 9.5315741 9.6586101 TCGA-C8-A12O 50 0 NA 385 breast stage iia t2 n0 (i-) m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 2 1 NA 6 2 2 2 5 6 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 37.037037037037 14.8148148148148 0 22.2222222222222 25.9259259259259 10.05545300 10.20981607 11.44692081 9.78070609 8.71264736 9.34333720 9.38765958 10.10519785 10.35669933 13.59213731 10.65496319 10.58154850 0.50812436 12.34452128 2.75599848 10.27791421 4.95101888 8.55656315 8.50101471 12.23642209 4.67799864 11.69836405 5.42693897 9.31017264 11.39948035 5.10798910 -1.49207854 8.69047087 11.59188807 2.83001188 8.22060324 7.84346698 NA 5.32825485 10.13469802 10.69604695 9.31382018 9.43659475 9.71264754 11.72784993 0.09301923 9.64634810 15.77849946 7.36820087 8.82661903 11.44213574 11.66289446 3.83000173 2.41497438 9.23173743 10.51159425 -1.49207854 11.74483804 5.24954394 7.47962023 5.18050197 9.75005960 11.36819339 10.00293200 12.94205294 12.64378565 7.76781963 10.87193734 10.46792981 11.04820444 11.16226487 4.99992786 12.02118709 11.60676649 0.50812436 10.67486710 9.25878342 1.80525118 6.39681882 10.38190499 9.95101991 10.44508232 10.97975157 3.46227486 6.83000427 12.54106912 11.34885427 9.65845840 9.06458246 0.1645500 0.2433200 0.3022900 -0.0618670 0.8381800 1.1711000 -0.2380400 -0.2378100 1.8775000 1.8775000 1.3326000 0.2672100 0.2727900 0.2928900 3.6569000 -0.0062735 0.3384700 1.5927000 -0.2736000 0.1808200 0.2439900 -0.3501100 0.2513100 0.2513100 -0.0901390 -0.0901390 -0.0901390 0.4128300 -0.1016500 -0.0274420 -0.0358590 0.3022900 -0.0675170 -0.2471900 -0.5785500 0.0195970 -0.2380400 -0.2378100 -0.2682100 0.0667420 0.0768070 -0.3150900 -0.3022000 -0.3022000 -0.3022000 -0.3022000 0.2727900 -0.3711300 0.2497500 -0.0878870 -0.0072347 -0.0072347 0.3384700 0.2390200 0.2390200 -0.2736000 0.1576600 0.1576600 0.2439900 -0.0424830 -0.3501100 0.2513100 -0.0479800 -0.0901390 -0.0901390 0.4167500 -0.3911100 0.6615500 0.6615500 0.273 0.273 0.250 0.000 0.796 0.796 -0.274 0.158 0.244 0.673 0.000 -0.099 0.251 -0.539 0.000 0.000 0.000 0.000 0.165 0.413 0.413 -0.019 0.662 0.000 0.000 0.302 0.000 0.000 0.000 -0.394 -0.588 -0.238 -0.238 0.000 0.000 0.941 1.256 -0.302 -0.302 0.000 0.000 0.273 0.273 0.250 0.000 0.796 0.796 -0.274 0.158 0.244 0.673 0.000 -0.099 0.251 -0.539 0.000 0.000 0.000 0.000 0.165 0.413 0.413 -0.019 0.662 0.000 0.000 0.302 0.000 0.000 0.000 -0.394 -0.588 -0.238 -0.238 0.000 0.000 0.941 1.256 -0.302 -0.302 0.000 0.000 8.20851628 NA 6.99992899 9.83394397 11.92487391 6.59107647 10.29107455 9.46515660 7.74683944 -0.49187564 11.95127896 12.08124425 2.75599848 0.09301923 4.23599505 7.93224251 4.55246930 11.35963021 12.23620947 10.45644364 8.98076708 -1.49207854 8.26962744 10.33383024 6.40894278 7.45644395 2.09305305 NA 11.08692073 5.53044535 7.12646185 7.98987584 6.22232157 9.36665574 9.89985702 4.31542856 8.22746529 0.50812436 7.89393854 13.18441916 7.48535598 6.60083320 -1.49207854 8.13743282 8.45352005 0.50812436 2.31542132 0.83001188 5.47386158 4.23599505 2.09305305 10.99239577 0.09301923 8.76664253 10.03799493 10.13743295 4.79347976 9.52836190 13.03957967 8.83225680 2.20851726 3.79347976 10.80011033 3.63735521 1.50807364 2.50807364 3.20851726 15.1047846 6.2223216 9.8288768 12.3445213 9.5722330 10.9217043 12.2364221 12.7383220 8.9705788 11.2334426 12.6953511 11.0291860 9.2317374 8.6074243 0.8300119 7.9238183 11.5679278 10.7654642 11.8044190 6.6373596 13.7545186 9.1725238 6.1079891 8.9046813 9.5394330 9.4266489 7.4910698 8.7332838 10.6549632 7.1840333 3.9675099 11.0956195 4.6165988 8.0418929 12.8976405 9.9211754 10.9062857 9.2373486 8.1465122 11.1505794 7.3346246 10.6127734 9.3138202 10.3346248 9.8003979 11.0009310 9.7089750 10.8081429 10.2317373 9.2154354 0.5081244 9.1732614 7.3122077 10.5115942 7.1910711 11.7448380 8.9939056 9.4021361 9.7500596 7.0277125 13.5979820 10.2754333 10.0760325 12.8105011 10.0291860 -0.4918756 1.9675006 10.5038435 10.6954284 8.9756821 TCGA-C8-A12P 55 0 NA 358 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 2 4 NA 1 1 2 6 2 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.989553e-06 9.499515e-07 15.0684931506849 53.4246575342466 2.73972602739726 15.7534246575342 13.013698630137 10.328048 10.122850 11.035727 9.375298 8.429070 8.894016 9.659210 9.757381 12.205594 13.726682 9.365303 10.205010 -1.387978 15.725960 1.419431 9.630286 3.312520 8.197049 6.617711 11.833069 -1.387978 7.363630 7.071518 10.337878 10.307314 5.482451 2.612093 8.572088 11.637226 2.197048 8.390163 6.746513 NA 5.494729 9.911867 11.143955 9.288043 10.137607 9.625409 11.110935 NA 8.075611 15.609839 7.179433 9.427469 11.014032 10.532067 3.741370 1.934026 9.956382 12.201854 -1.387978 11.024656 5.506903 5.978408 5.340007 8.780758 11.558810 9.390163 11.422457 12.608471 7.038351 9.986039 9.466175 10.419843 10.892277 4.782010 12.356605 8.642753 -1.387978 10.324183 9.354396 1.316957 6.021478 10.951101 9.869474 9.594367 9.558261 2.612093 8.293324 12.852356 10.410558 10.043584 9.607146 1.460700 0.413660 -0.155720 1.380800 -0.130240 0.352270 0.865440 -0.131790 0.258330 -0.636080 3.656900 0.248490 -0.081224 -0.173280 0.551160 0.551160 0.126760 0.000000 -0.204040 2.446800 -0.210750 -0.286490 3.656900 3.119000 -0.031010 -0.031010 -0.300920 0.191100 -0.224590 0.214920 -0.196050 -0.155720 -0.564600 -0.140830 0.352270 0.352270 0.659500 -0.513260 -0.158150 0.487500 0.302590 -0.599780 -0.221140 -0.221140 -0.167450 -0.185170 -0.081224 -0.081224 -0.232080 0.551160 0.144220 0.144220 0.000000 -0.225690 0.131920 -0.552210 0.194470 0.194470 -0.197930 -0.267500 -0.286490 -0.315340 -0.542540 -0.031010 -0.264010 0.152410 0.177630 0.119830 0.129560 0.223 0.223 -0.173 -0.029 0.000 0.000 -0.217 0.194 -0.193 0.000 0.000 -0.286 -0.286 -0.511 -0.511 -0.250 -0.250 0.119 0.414 0.152 0.152 0.894 0.120 0.232 0.232 -0.113 -0.113 -0.565 -0.141 0.352 0.352 -0.179 -0.179 0.488 0.303 -0.600 -0.160 -0.167 -0.167 0.000 0.000 0.223 0.223 -0.173 -0.029 0.000 0.000 -0.217 0.194 -0.193 0.000 0.000 -0.286 -0.286 -0.511 -0.511 -0.250 -0.250 0.119 0.414 0.152 0.152 0.894 0.120 0.232 0.232 -0.113 -0.113 -0.565 -0.141 0.352 0.352 -0.179 -0.179 0.488 0.303 -0.600 -0.160 -0.167 -0.167 0.000 0.000 8.0735653 0.9340258 5.4449751 9.5152147 14.1215828 5.1451802 11.0142987 10.0640493 7.7418330 -0.3879778 11.9513794 12.1807417 2.9340069 NA 2.7820101 8.1119322 3.5662794 10.8735934 12.4460632 10.9323225 9.1522141 NA 8.4778194 10.0730538 6.5662824 1.7820311 7.0257143 NA 11.1539087 4.2559388 8.1258138 9.3003363 8.8576389 9.3002576 10.1415166 3.2559388 8.0022553 NA 7.6344539 12.2906862 6.8215393 8.3653028 -1.3879778 7.8928567 7.4194411 -0.3879778 2.6120930 NA 5.0550308 2.1970476 1.6120694 11.3786150 6.1356477 11.4749171 10.2937637 10.2240330 6.5249757 10.6060858 13.4407680 8.6995489 4.5893680 4.5428214 9.2064108 3.5662794 NA NA 4.5189757 11.6495816 8.3073142 8.3552374 15.7259605 9.6680462 11.7147180 11.8330689 10.0565834 10.0918663 10.6152526 13.6929036 10.7378224 9.9563820 9.1599445 -0.3879778 9.5008293 10.6905705 10.9164374 12.8437573 4.8019088 15.7574604 8.8300439 5.0550308 9.4354534 8.5383822 10.1144007 6.5368984 4.1666753 9.3653028 8.8433071 0.9340258 11.6537452 9.2101385 7.2340644 12.4105579 10.1970486 11.1221084 7.4097473 8.8492959 9.1502751 6.6995489 10.0106801 9.2880431 11.1490617 10.5512980 10.8951745 9.8372935 10.8071507 10.8099171 9.3819240 NA 10.1678879 7.8186851 12.2018542 7.3400067 11.0246559 8.4962566 10.1405402 8.7807582 7.7232220 13.3694240 10.7222431 10.9404805 11.8019106 10.7202838 NA 6.4025977 9.9141537 10.2304716 9.0022550 TCGA-C8-A12Q 78 1 385 NA breast stage iiia t1 n2 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 2 2 1 NA 4 1 2 6 5 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.496941e-06 7.629541e-07 14.7368421052632 56.8421052631579 3.15789473684211 17.8947368421053 7.36842105263158 10.0584629 10.3314258 11.7048372 10.1427862 8.3152909 9.6848301 10.6134986 10.2587616 10.4167634 14.2717101 9.7804883 10.7493017 -0.1590736 17.2356285 5.1507627 9.0454801 4.3003434 8.3125844 6.3327616 12.1155784 -0.2129019 11.1944235 7.6331573 9.1035050 10.8588773 7.5980212 -0.7439555 8.0568463 12.3233809 1.7153663 7.3354314 7.8390293 -0.7439555 5.4056929 9.8998028 11.3667561 8.9511748 11.4311842 11.0880454 12.2033095 2.7795119 10.1822426 15.1527874 7.3153181 9.8100078 11.0237172 10.7728777 3.7795119 4.7316775 9.9221706 11.2694437 NA 11.3083448 4.6822137 7.0600777 5.6046733 10.9910795 11.8299487 9.5168661 12.0853720 12.9997817 6.8521362 10.8572531 10.2607604 11.2380489 11.4052174 5.1628384 12.2827293 10.0705290 1.8409264 11.0973144 9.5699632 2.5091891 5.9141579 10.6331571 10.1903746 10.2619219 10.1274668 2.8997943 9.5648545 12.5615096 12.0034053 8.5665595 9.6019061 3.65690000 -0.00705760 0.47718000 0.44528000 -0.00816240 0.68980000 0.45837000 3.03990000 0.00416320 -0.01450300 0.00866550 0.49926000 0.02960600 -0.46014000 2.64220000 1.43020000 0.01530800 -0.03502100 -0.00940460 0.01335300 0.00917050 -0.46323000 3.65690000 0.25996000 0.55974000 -0.46195000 -0.00981850 0.50933000 0.04287400 0.01251600 0.01349200 -0.48187000 0.01265500 -0.00512270 -0.00027724 -0.00857660 0.45837000 -0.47003000 -0.48565000 0.46776000 0.53169000 -0.46940000 -0.45018000 -0.44674000 0.00055459 0.00263570 0.00180300 0.46092000 -0.47564000 -0.45458000 -0.47416000 -0.47416000 -0.03502100 -0.03502100 0.01098200 -0.00940460 0.01335300 -0.39174000 0.01195800 0.02763800 -0.46323000 -0.46376000 -0.18986000 -0.50214000 -0.46195000 0.30123000 -0.46089000 0.02862200 0.03750000 0.000 0.000 -0.460 -0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.463 -0.463 -0.190 -0.190 0.000 -0.452 0.000 0.000 0.509 0.509 -0.461 0.000 0.000 0.000 0.445 0.445 0.000 0.000 0.690 0.000 0.000 0.000 0.465 0.465 0.000 0.000 0.000 0.000 -0.202 -0.202 0.000 0.000 -0.460 -0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.463 -0.463 -0.190 -0.190 0.000 -0.452 0.000 0.000 0.509 0.509 -0.461 0.000 0.000 0.000 0.445 0.445 0.000 0.000 0.690 0.000 0.000 0.000 0.465 0.465 0.000 0.000 0.000 0.000 -0.202 -0.202 8.0024606 -1.7441972 4.5597243 10.4072803 12.2092337 7.2436082 11.5558700 9.1164828 8.0218622 2.4258621 13.8806849 11.6366606 3.1628384 2.5778759 3.3852239 7.8124527 4.0633045 10.3142765 11.8287652 10.2931503 8.8752496 2.8409063 8.8688151 9.7422788 6.8816548 10.0368964 6.3057955 NA 10.6474587 3.3852239 7.3852300 7.7397624 9.1977278 9.6818653 10.6790624 4.0633045 8.3592343 -1.7441972 7.7637415 12.0713299 6.8558589 7.6843068 -1.7441972 7.5133344 6.7153786 3.8706606 3.1139338 5.2559463 5.3434078 3.3160009 3.0632958 10.5560131 0.2559237 10.2317945 11.0397633 10.1197456 6.4943516 10.2195652 12.2803071 9.0998677 4.2559463 3.7153772 10.3784510 3.3434078 -1.7441972 0.2559237 0.5778276 13.089544 6.174810 9.495545 17.235629 10.779509 10.550854 12.115578 9.350684 10.298926 10.954217 14.688391 9.168087 9.922171 8.123225 2.343408 8.798978 11.409815 11.372778 13.293107 6.711273 13.861656 9.075327 6.017499 8.710246 8.344735 10.292968 7.104569 5.374886 9.780488 5.977046 8.598021 10.316980 7.275537 7.635563 11.198828 10.305114 10.894609 7.579744 8.035666 10.356609 6.043850 9.816504 8.951175 10.005816 8.938063 10.564570 10.397734 10.773616 10.727876 8.895287 1.425889 9.315669 8.612035 11.269444 6.626633 11.308345 7.899803 11.423678 10.991079 7.781467 13.147018 10.094363 9.579001 12.238049 10.143929 1.956391 NA 10.763493 10.070930 9.508021 TCGA-C8-A12T NA 0 NA 0 breast stage iia t2 n0 m0 female 2010 NA NA infiltrating ductal carcinoma 0 asian not hispanic or latino 1 2 1 NA 4 3 2 2 1 2 5 1 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 7 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 7 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 3.953489e-06 9.710324e-07 10.4166666666667 70.8333333333333 0.694444444444444 12.5 5.55555555555556 9.3721716 9.5816510 11.5953932 8.3078652 8.1788351 8.3398821 10.6530761 10.3928265 10.7770134 14.5024219 11.0880841 10.7169468 -0.1699070 15.3781463 2.6374711 9.5681994 7.8413341 7.9307693 6.7004716 12.6606223 NA 13.8038044 2.4150826 9.6029330 11.0821811 5.5443525 1.4150555 8.4592996 10.6011838 1.6374711 8.0224000 7.4739630 -0.1699070 3.3536620 9.3634368 9.7512041 9.8378351 11.3880494 9.7211313 10.4244317 11.3940183 10.4963310 15.9234937 6.9179938 9.9792191 11.2579437 9.9002280 3.9593900 5.2895394 8.4374375 11.0851356 NA 11.5937344 6.0199309 5.2730496 5.5166077 10.1904055 12.2525661 10.5231584 11.7497153 12.2067751 7.6470907 10.9545515 10.2748114 10.3224610 10.9115905 4.0757551 11.7004718 11.9747653 -1.1697447 10.3702351 9.8195015 0.9577661 5.1699571 8.9937567 9.9638915 10.1390148 9.5799764 3.4150691 8.3575841 12.2743455 12.2233634 9.8009319 9.5426342 0.0189430 0.0189430 0.0024316 0.0087528 0.0256710 -0.0634200 -0.0162920 -0.0162920 0.6381000 0.6381000 1.3415000 -0.0145030 0.6562700 -0.0089906 0.6890600 0.6890600 0.0011093 0.0011093 -0.2716900 0.0054139 -0.0151910 -0.0278080 3.5420000 0.0000000 -0.3006300 -0.3006300 2.8249000 3.6569000 -0.0227440 0.0189430 -0.6630000 0.0087528 -0.0234290 0.0023581 0.0052749 0.0052749 -0.0162920 -0.0162920 -0.0162920 -0.2281000 -0.2451500 0.6381000 -0.3626100 -0.3626100 -0.3626100 -0.3626100 0.6562700 0.6081800 -0.0089906 0.6890600 -0.7279400 0.6428600 0.0011093 0.0011093 0.0011093 -0.2678100 0.0054139 0.0054139 -0.7474800 -0.7768500 -0.0278080 -0.6944100 -0.0008316 -0.3006300 -0.3006300 -0.0228810 0.0012481 -0.0299240 -0.0385780 0.000 0.608 0.000 0.000 0.000 0.000 -0.272 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.475 2.475 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.228 1.342 1.342 -0.363 -0.363 0.000 0.000 0.000 0.608 0.000 0.000 0.000 0.000 -0.272 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.475 2.475 0.000 0.000 0.000 0.000 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 -0.228 1.342 1.342 -0.363 -0.363 0.000 0.000 8.8258743 NA 5.3999640 10.9934423 12.0942564 6.4554505 10.8860673 8.9339588 8.2751221 -0.1699070 11.1321747 11.9132207 4.0780376 1.8300930 0.8300930 8.3614885 4.8073858 10.7744531 10.7604748 9.7966125 8.8483071 0.4151096 8.2094855 10.5430639 5.3058392 4.0780376 4.4448194 NA 10.4098944 6.5235933 7.3999623 9.3875708 4.4448194 10.2882009 9.8676540 0.8300930 11.3361667 NA 7.1384459 13.1243688 6.1247272 7.5340110 NA 0.4151096 7.7309741 1.1520536 3.3536620 NA 4.0780376 4.4150691 2.5305452 11.4983273 2.7369944 7.3299533 10.4503269 10.1542876 4.4448194 9.8073870 12.5626985 8.1224289 2.2895394 5.0395596 10.4603742 8.0874947 NA NA 2.1520211 13.205866 5.772622 8.301782 15.378146 9.602422 10.610237 12.660622 11.517264 9.661723 10.385655 12.895860 10.554195 8.437437 10.206232 -0.169907 7.584995 11.303052 11.241618 12.573679 5.979854 13.318510 9.044426 5.938632 9.082773 8.349743 9.990603 6.509587 8.403754 11.088084 7.152035 1.830093 10.304827 5.885389 7.946867 11.721321 10.142423 10.420226 9.094550 9.441132 9.636657 4.917570 10.699111 9.837835 10.465825 10.390440 10.891478 9.648689 10.881996 10.432806 8.317947 -0.169907 8.996860 6.444816 11.085136 4.917570 11.593734 8.762322 9.913586 10.190405 7.226840 14.634238 10.917570 9.680294 11.976198 11.600977 -0.169907 NA 10.046247 10.097479 8.993757 TCGA-C8-A12U 46 0 NA 385 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 2 1 NA 1 3 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.323135e-07 2.427581e-07 25.8064516129032 22.5806451612903 0 35.4838709677419 16.1290322580645 9.838664 9.449070 11.971389 8.573857 10.094639 9.315400 10.255404 10.382848 9.241039 14.853390 9.153898 10.968278 2.375818 12.074236 2.790855 7.980683 6.398190 8.233802 10.883285 12.631538 1.375846 13.918329 NA 9.916272 11.240265 9.567292 6.470338 8.527260 11.213974 -1.209228 7.463284 5.477360 -1.209228 3.112784 9.294684 9.203429 9.061154 8.967032 9.218171 10.882955 1.112767 10.360714 13.635417 6.832134 9.749411 10.595796 10.324675 5.076260 7.840707 8.846141 9.223401 NA 10.445942 3.598210 6.813226 4.721597 9.523026 12.256297 9.637916 11.009725 12.562658 7.318336 11.069598 10.196000 11.115039 10.717896 4.148414 11.716784 9.101471 NA 10.809059 9.816690 2.492417 4.217122 11.576720 9.485216 10.464609 10.150059 2.878313 9.972632 11.687380 9.848850 9.283713 9.023279 -0.4358300 0.2657900 0.5241500 0.6238800 -0.0235490 -0.4816500 -0.0047079 -0.3579500 -0.4574700 -0.4574700 1.4207000 0.0101460 -0.4411300 0.9322300 -0.4463100 -0.4463100 2.2137000 3.6569000 -0.4482500 0.4789000 0.0308730 -0.4337700 -0.4337700 3.0905000 0.0389130 -0.0794760 -0.2267500 0.4151300 0.0143300 -0.4358300 0.9015000 -0.0808070 0.4331300 -0.5247100 0.0108420 0.0000000 0.0214630 -0.3579500 -0.4080400 0.0216030 -0.0015243 -0.4630200 -0.4682300 -0.4474500 0.3278500 0.3278500 -0.4411300 -0.4411300 -0.4294200 -0.4463100 -0.4463100 -0.4696100 -0.4344200 -0.4413500 -0.4413500 -0.4482500 0.0054139 0.0054139 -0.4611000 0.0016642 -0.4478200 -0.4337700 0.4516600 -0.3931900 -0.2267500 0.4151300 -0.8932700 -0.9453200 -0.4448800 0.000 -0.441 -0.411 -0.411 -0.431 -0.431 -0.448 0.000 0.000 0.594 0.000 -0.434 -0.434 0.452 0.452 -0.416 -0.416 0.000 0.000 0.415 0.415 -0.114 -0.463 0.428 0.428 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.696 1.153 -0.447 -0.120 0.000 0.000 0.000 -0.441 -0.411 -0.411 -0.431 -0.431 -0.448 0.000 0.000 0.594 0.000 -0.434 -0.434 0.452 0.452 -0.416 -0.416 0.000 0.000 0.415 0.415 -0.114 -0.463 0.428 0.428 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.696 1.153 -0.447 -0.120 0.000 0.000 8.7333730 NA 3.4913016 10.5578015 14.5386058 8.0807392 13.0391568 7.6203591 9.6297710 3.3144210 11.5297953 12.0873203 5.6977488 1.7908554 1.7908554 8.0458874 2.8783134 11.6673756 11.1861250 10.4119947 9.4445994 6.1217759 8.3944850 9.0588157 6.8352533 2.4912887 7.6826421 NA 10.1048753 5.7566417 5.6237498 8.1960001 3.5457460 9.2995547 8.9806831 2.2502946 8.5590428 NA 6.6917254 11.9889967 7.9782105 7.1037421 NA 6.4632840 8.0831804 5.3758214 1.9607712 NA 6.6174072 1.9607712 0.7908554 10.5619353 NA 7.0003122 10.3095117 9.6418267 5.4055670 8.2887106 14.2354206 8.0693080 6.7450544 4.3454461 13.9837678 -0.2090612 NA 0.7908554 2.8783134 10.897094 6.883616 9.698500 12.074236 9.753755 10.989917 12.631538 13.182841 8.702251 11.618400 11.827547 9.975734 8.846141 8.368287 1.598222 9.034033 11.233025 11.4197598 12.7115836 6.0762598 12.2391027 8.9557656 6.3758214 9.0646541 8.5474147 10.7928227 6.1484115 9.8948020 9.1538983 7.3338906 -1.2092280 9.8582930 6.5051033 8.6951319 7.6887042 10.6856763 10.8225598 8.4685784 9.5179282 8.2002493 6.4773584 10.1251989 9.0611541 10.9288104 10.1566343 10.5365329 8.6158172 10.3958750 10.8832854 8.4615151 -0.2090612 9.1456589 6.0576452 9.2234006 7.0148607 10.4459421 4.8352521 11.6443631 9.5230259 7.0148607 13.5230790 11.3798074 9.9917572 11.3776984 10.3986512 5.1127877 NA 9.6261195 10.0917831 10.1105307 TCGA-C8-A12V 55 0 NA 385 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 asian not hispanic or latino 2 3 3 NA 1 1 5 5 4 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 6.935946e-08 13.3333333333333 6.66666666666667 6.66666666666667 60 13.3333333333333 9.9814944 9.4987272 11.4054021 9.9493096 9.2292086 9.9344394 7.9145729 10.0169347 10.3203366 12.3502241 10.0853061 10.4962990 1.0197731 10.6050934 1.6978183 10.5546418 7.3452855 9.2714745 11.6483831 5.6751074 NA 10.1314126 8.6621681 9.7078378 10.4038914 8.6520236 4.4257480 11.9947004 10.9203202 2.6047119 8.1916826 6.9552151 -0.3022262 6.7090549 9.3506723 9.3569312 9.2752560 10.4808254 9.2790278 10.6512962 1.5051796 6.4987264 14.7874018 7.1712489 8.7571716 11.0360065 10.1459435 3.9832308 NA 9.0912177 11.1881767 -1.3022262 10.1991668 6.0553801 9.0454487 5.6978266 10.4979182 11.8105925 10.1008392 10.7984895 12.8006231 6.4726145 10.2360161 10.0839214 11.1539249 11.4066956 4.4791853 12.4190332 9.3434856 -0.3022262 10.7094039 9.6137066 3.2839958 7.0772056 11.1610961 10.4853217 10.7319383 10.1177874 3.3982683 6.0287437 13.4134139 12.7223609 10.4316899 9.6263455 0.1587600 0.1587600 0.0012481 0.1688000 -0.0690560 -0.0083005 -0.0018014 -0.0018014 0.2331800 0.2331800 0.2331800 -0.0736100 -0.0018014 0.0072217 0.0072217 0.0072217 -0.0515860 -0.0515860 -0.0212350 0.0000000 -0.0760120 -0.0461770 -0.0461770 -0.0461770 0.1014700 0.1014700 0.1014700 -0.0854570 0.1587600 0.1587600 0.1132700 -0.0760280 -0.0690560 -0.0729420 -0.0083005 -0.0083005 -0.0018014 -0.0018014 -0.0867840 0.1260900 0.1260900 0.2331800 -0.0171160 -0.0171160 -0.0171160 -0.0171160 -0.0018014 -0.0018014 0.0072217 0.0072217 0.0072217 0.0072217 -0.0515860 -0.0515860 -0.0515860 -0.0365380 0.0000000 0.0000000 -0.0760120 0.0035867 -0.0461770 -0.0461770 0.0076540 0.1014700 0.1014700 0.2827900 -0.0745440 0.0849320 0.0709400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.159 0.159 0.283 0.283 0.000 0.000 0.113 0.113 0.000 0.169 0.000 0.000 0.000 0.000 0.000 0.000 0.126 0.126 0.233 0.233 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.159 0.159 0.283 0.283 0.000 0.000 0.113 0.113 0.000 0.169 0.000 0.000 0.000 0.000 0.000 0.000 0.126 0.126 0.233 0.233 0.000 0.000 0.000 0.000 7.9266459 NA 5.2676819 10.0955019 10.9103236 6.1824480 10.5888514 10.0242735 8.8459479 1.0197731 12.0283240 11.8865428 1.2827956 NA 3.3416869 9.6092192 5.4120736 13.0048857 11.5560025 11.0504225 8.9338414 6.3488786 8.9657843 10.4804160 8.9820729 7.3913141 -0.3022262 0.2827363 10.6747493 3.3982683 6.1072192 8.1796265 8.1916826 10.3508110 10.3457352 5.8271102 9.7271145 6.6808208 8.3014537 12.5458632 8.0465554 6.6636122 1.2827956 1.0197731 8.1896803 1.2827956 1.8677384 -1.3022262 8.7146353 3.9480308 7.8063518 10.5608519 0.2827363 7.7692897 11.0877274 9.5842859 7.4426607 10.8633623 14.8042061 10.0696039 7.5019582 5.8876520 10.2874783 2.0197731 5.6751074 2.0197731 6.4120736 11.279329 8.457715 8.159307 10.605093 10.286542 9.942786 5.675107 9.121993 8.753110 10.643271 13.332185 11.545472 9.091218 7.452715 1.867738 7.625605 10.638508 10.692534 11.238682 3.090142 14.313512 8.958747 8.644733 9.379066 7.189680 9.569717 9.495489 8.248574 10.085306 6.758523 2.282796 10.387825 5.697827 8.920948 13.040805 11.408418 10.201653 7.683669 7.766606 10.215004 9.852012 11.069492 9.275256 10.916390 9.824532 10.918810 10.341683 11.388480 10.448953 8.305157 NA 9.765759 7.185065 11.188177 10.083690 10.199167 7.890120 10.883431 10.497918 8.149038 14.195960 10.638508 10.418071 12.482258 11.314606 5.763916 1.697818 10.836099 9.691473 9.100839 TCGA-C8-A12W 49 0 NA 385 breast stage iiib t4 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 2 1 NA 5 2 1 2 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.109751e-06 3.121176e-07 47.6190476190476 4.76190476190476 4.76190476190476 21.4285714285714 21.4285714285714 9.7707356 10.0020611 11.8536629 9.6190492 8.5426295 8.7621564 10.3566481 9.8491131 10.4816644 15.0911660 11.2024272 11.4120805 2.5950978 13.1147331 1.9576546 10.2456358 5.4742413 8.3876546 7.8698911 12.3474775 -0.2122332 13.4891026 -0.2122332 10.2197514 11.4526336 7.9726174 3.9576639 11.5668457 11.7276884 3.1096782 10.0480735 7.1186587 1.7877250 6.4812295 9.1474914 10.8688925 9.6127006 10.2265338 9.1800593 11.3592576 6.4459534 9.6619550 16.0804500 7.4565557 9.7214104 12.5338363 11.7641271 3.2471680 2.4881808 9.2337913 10.2124332 -1.2122332 10.6316630 6.0356701 6.6581072 5.2634739 10.1578845 11.5015580 10.0468967 11.4515224 12.5212870 6.9272932 10.6569502 10.0070074 10.9362185 11.4636990 5.5019868 11.0521846 8.4724906 NA 10.3452056 10.3495073 3.3935947 6.1886205 11.2134824 9.9008330 10.4477379 10.4994089 5.2955357 8.6673252 11.7813880 10.9378066 10.0309159 9.2223701 0.386340 0.386340 0.236590 0.000000 0.151590 -0.495800 0.171810 -0.416300 1.856000 -0.524810 1.526200 0.333990 -0.241190 -0.170820 3.381500 -0.205730 1.268000 0.139860 -0.058462 0.450540 0.063223 0.354300 0.354300 0.354300 -0.358180 0.138350 0.138350 3.282800 -0.192240 -0.192240 -0.154920 0.178570 0.076927 0.022304 -0.465360 -0.041159 0.171810 -0.416300 -0.416300 0.097833 -0.154530 -0.501620 -0.201120 -0.201120 -0.201120 -0.208230 -0.241190 -0.297740 -0.170820 -0.170820 -0.131990 -0.181560 1.268000 0.094430 0.094430 -0.066080 -0.421450 -0.421450 0.063223 0.381550 0.346200 0.354300 -0.216270 -0.358180 0.138350 0.027638 -0.774730 -0.041838 0.485850 0.334 0.093 -0.171 -0.171 1.861 0.000 0.000 0.451 0.000 0.382 0.382 0.354 0.354 -0.216 -0.216 -0.220 0.138 -0.192 0.194 1.328 1.437 -0.775 0.486 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.249 -0.416 0.000 -0.103 1.606 2.108 -0.201 -0.201 0.000 0.000 0.334 0.093 -0.171 -0.171 1.861 0.000 0.000 0.451 0.000 0.382 0.382 0.354 0.354 -0.216 -0.216 -0.220 0.138 -0.192 0.194 1.328 1.437 -0.775 0.486 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.249 -0.416 0.000 -0.103 1.606 2.108 -0.201 -0.201 0.000 0.000 7.6581065 NA 5.9676505 9.8571916 12.2162330 6.5297476 10.4111663 9.4611393 9.0823628 NA 11.2581466 12.3093056 1.9576546 -1.2122332 2.3727014 8.6237923 4.3423343 10.6983847 11.4423780 10.7682386 8.9412939 1.9576546 7.7707352 9.5467978 7.1006245 6.0451306 1.5950739 NA 10.7682386 6.0261472 7.2181941 8.8632211 7.5258340 10.1836081 9.9614192 2.5950978 9.4847095 -1.2122332 6.9014836 12.9771032 7.1320380 6.9324002 NA 8.3727045 7.7735837 NA 5.3876555 NA 4.7650202 4.0088454 3.2471680 11.1425423 0.3727293 8.8239156 10.2358583 9.5342562 4.4601659 10.0291293 12.3919477 9.0439506 5.3113033 3.0356767 10.6367560 2.4881808 NA NA 1.1096949 14.512106 5.658106 8.299495 13.114733 9.714779 10.481664 12.347478 12.456073 9.220284 11.976022 12.321802 10.255857 9.233791 8.837590 2.875210 7.924733 12.593587 11.1372997 11.5524062 6.9726168 12.8714689 8.3839319 5.0356679 9.1186587 10.1000577 10.6381281 7.2223699 9.5334164 11.2024272 7.7735837 -0.2122332 10.0574531 4.7419361 9.2144993 12.5263620 9.6650260 10.0159594 8.8923406 9.3537959 11.3105686 8.7243798 9.8393112 9.6127006 9.4070449 9.5105496 11.3611525 10.2700458 10.2735713 10.7845685 9.8877472 3.3727014 9.2390973 6.7302568 10.2124332 8.5442984 10.6316630 8.6379286 9.8031570 10.1578845 7.5854035 13.0331461 10.0783368 9.6441674 12.8409042 10.3750507 NA NA 10.0886665 10.0527709 9.4288905 TCGA-C8-A12X 62 0 NA 385 breast stage iib t2 n1 m0 female 2010 NA no mucinous carcinoma NA asian not hispanic or latino 1 1 5 NA 2 2 1 1 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.075072e-06 3.467973e-07 24.390243902439 12.1951219512195 2.4390243902439 29.2682926829268 31.7073170731707 9.6554856 8.9843467 11.3172988 8.6541981 8.9064580 8.4106116 10.3937376 10.2477226 10.6438562 14.6913528 10.2587779 10.9193778 NA 12.0337003 5.4075567 10.2955790 6.4556527 7.7823031 8.9719984 12.4714559 0.5248661 14.5930216 NA 10.2671404 10.6308236 8.6017307 4.4318035 8.6229472 8.8824670 0.5248661 9.4659626 6.0327092 NA 4.1687704 9.6847865 9.4674297 9.8264114 8.7196719 11.1136297 11.5963775 NA 10.8178119 14.5273786 7.0597241 11.4571299 11.5171454 10.5445059 2.8468343 7.2460147 8.2460142 10.0386428 -0.4751339 10.1723735 4.4318035 4.4318035 3.9172312 10.0650431 11.2968172 10.2764592 8.5693092 11.8879548 9.1633510 11.1373229 10.9354354 11.1442181 10.7035800 4.2798056 11.0077231 9.0833357 NA 10.4182166 8.7846584 1.8468343 4.9172312 10.9970982 9.7917016 10.5277301 10.1822336 8.1795514 6.0167682 10.8541508 10.1705736 9.8736433 9.3450941 0.00861350 0.00861350 0.05765300 0.05765300 0.01237600 -0.00866590 0.38849000 -0.80136000 3.65690000 3.65690000 0.42553000 0.01084200 -0.00249380 0.00041593 0.00041593 0.00041593 0.04442200 0.04442200 -0.08226900 -0.79469000 -0.39697000 0.02104300 0.02104300 0.02104300 -0.04455100 -0.04455100 -0.04455100 -0.01161100 -0.00567570 -0.79285000 -0.37651000 0.05765300 0.00055459 0.01237600 -0.80319000 0.00986690 0.38849000 -0.80974000 -0.82415000 0.04372300 0.04372300 -0.78260000 -0.38957000 -0.38957000 -0.38817000 -0.39753000 -0.00249380 -0.01232100 0.00041593 0.00041593 0.00041593 0.00041593 0.04442200 0.03524200 0.03524200 -0.05185600 -0.79469000 -0.81182000 -0.38392000 -0.01037000 0.02104300 0.02104300 0.08999600 -0.04455100 -0.04455100 -0.01161100 0.00000000 -0.01986300 -0.01986300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.795 -0.384 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.388 0.388 0.000 0.000 2.874 3.657 -0.390 -0.390 -0.123 -0.123 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.795 -0.384 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.369 -0.369 0.000 0.000 0.000 0.000 0.000 0.000 0.388 0.388 0.000 0.000 2.874 3.657 -0.390 -0.390 -0.123 -0.123 8.3672653 5.1098787 7.4136584 10.9102383 11.8552718 8.1530691 10.3570140 8.6566690 9.5288967 -0.4751339 11.7165913 11.9355785 2.5249162 NA -0.4751339 8.0640739 1.5249162 10.7992933 11.6806820 10.0455338 9.4348081 3.2253521 6.6541978 10.7227462 5.7537329 2.1098620 NA NA 9.3952798 7.5472832 5.1396250 8.0909693 7.4014317 9.9349318 10.0928712 3.3322640 8.9193779 NA 6.3828955 12.0504359 6.9086196 8.6948402 -0.4751339 6.0947702 8.2864663 NA 2.9843524 NA 3.1098787 5.5249162 1.8468343 10.5835834 NA 7.1469667 11.1902510 9.8535901 4.6123761 9.8114730 13.4225715 8.3095500 2.5249162 2.8468343 10.4067939 3.7728464 -0.4751339 4.3828955 1.5249162 13.442287 6.332269 8.833254 12.033700 9.709791 10.499330 12.471456 11.618663 8.942768 10.702335 12.079504 9.612378 8.246014 7.596378 1.524916 7.273108 12.794480 10.4600802 11.8947851 5.3322711 12.9575849 8.1542718 4.0484803 9.0562966 9.0067146 10.0493589 4.9843478 9.7597326 10.2587779 6.6334399 4.2253521 8.7416611 6.9595430 9.8264798 9.4090856 9.6721200 10.3609655 8.7963781 9.8703203 10.8530290 4.5249162 14.3529469 9.8264114 10.1303946 10.1570015 9.6721200 9.0504359 10.6030659 10.1542717 8.5192687 3.3322640 9.4192783 4.9511821 10.0386428 4.3322711 10.1723735 5.5021937 10.3144488 10.0650431 6.5361431 12.3358883 10.7073094 10.2314112 12.2298994 10.5445059 -0.4751339 1.9144880 10.9220549 9.0107443 8.8332541 TCGA-C8-A12Y NA 0 NA 1476 breast stage iib t2 n1 m0 female 2010 NA yes infiltrating ductal carcinoma NA asian not hispanic or latino 1 1 1 NA 3 2 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 3.121176e-07 43.3333333333333 6.66666666666667 3.33333333333333 16.6666666666667 30 9.8561388 8.5614644 10.7688641 6.2677324 9.0008152 9.4627194 9.3736323 9.4422473 9.4411012 12.8214966 11.1335385 10.0074110 0.7285736 12.7592989 3.2728891 10.9392457 7.8732325 7.8195686 8.0978083 13.2929223 NA 14.1252683 5.5359285 10.3250747 10.8501078 4.8018209 NA 8.8018234 10.7075231 1.1435893 6.9637908 7.7058542 NA 3.1436057 8.1322966 9.7788765 7.5337806 10.4431061 8.6244022 9.8414481 2.8984986 11.5339152 13.9905713 6.9043986 9.0713897 10.4867975 9.8976641 3.7285736 2.6671655 9.4445362 10.6528920 NA 11.3545875 4.2521356 4.0978046 4.4655370 8.8876048 11.9404626 10.6469407 11.6590653 12.1571962 9.2204274 10.9146886 9.9294729 10.4703222 10.3188495 1.4655566 12.8301671 10.5091141 -0.8564760 10.9824218 8.6009926 2.6160989 3.6030388 8.4045315 8.8535572 9.6745058 8.6612811 1.3135361 8.1756573 12.7910703 11.8691911 9.0300706 10.0353956 1.13840000 1.19140000 0.00332990 1.89490000 0.01670500 0.01153900 0.00624810 0.00624810 -0.00470790 -0.00470790 -0.00470790 -0.00591580 0.01056400 0.00610900 3.60070000 3.65690000 -0.01807800 -0.00051129 -0.69703000 0.01502800 -0.36011000 -0.01849000 -0.01849000 0.00000000 -0.04874800 -0.04874800 0.99136000 0.61510000 -0.01147300 -0.01147300 -0.01174900 -0.70968000 -0.02086900 0.01488800 0.01153900 0.01153900 0.00624810 0.00624810 0.00013863 0.10716000 0.10643000 -0.72888000 -0.01216200 -0.01216200 -0.01216200 -0.01216200 -0.00221680 -0.00221680 0.00610900 0.00610900 -0.36068000 -0.36567000 -0.01807800 -0.00051129 -0.00051129 -0.69703000 0.01502800 0.01502800 -0.18610000 -0.72172000 -0.72252000 -0.01849000 0.01530800 -0.04874800 -0.04874800 0.63920000 0.01985400 -0.69832000 -0.70458000 0.000 0.000 0.000 -0.350 0.000 0.000 -0.697 0.000 -0.360 0.441 -0.689 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 1.138 0.615 0.615 0.000 -0.698 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.106 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.350 0.000 0.000 -0.697 0.000 -0.360 0.441 -0.689 -0.690 0.000 0.000 0.000 0.000 0.000 0.000 1.138 0.615 0.615 0.000 -0.698 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.106 0.106 0.000 0.000 0.000 0.000 0.000 0.000 8.8578572 NA 4.4834611 11.3028525 11.7410825 7.2680432 11.7322094 6.6385069 9.1334746 1.1435893 12.0335910 11.9477761 2.6030506 3.3135361 2.3135361 7.2547471 3.8715283 11.4449651 11.4219161 10.9122097 9.6424610 2.4655305 8.5110264 10.2825236 5.5865546 6.1770348 5.8230921 NA 10.1129984 3.7285736 6.2204267 8.8535572 6.3579302 10.9140465 10.4728476 2.5359285 8.5011636 NA 6.6071365 11.2727338 7.3748326 7.3359048 NA 2.9509722 8.7125181 3.0978130 3.8984986 NA 3.3530692 4.7739858 0.1436546 10.8342646 -0.8564760 7.5761540 10.5468902 10.0691663 5.8918056 9.4485335 13.2790806 6.6982004 3.2728891 3.9765011 11.4291585 0.9509909 NA 2.2310637 2.4655305 14.715065 7.157632 8.629441 12.759299 9.548221 11.456637 13.292922 11.389907 11.442592 10.126249 13.013109 9.927838 9.444536 10.864925 2.143622 7.447392 10.716549 10.6561054 11.8935860 6.3034830 13.5547209 8.9404625 3.9509629 8.9693658 7.7453826 9.6741255 5.4473941 8.5582971 11.1335385 8.2429597 0.4655044 9.8672727 6.8336099 6.3731993 10.6902652 9.1770348 10.6759678 8.4576284 10.4281468 7.5614644 4.6982018 11.2053543 7.5337806 10.9428935 10.3343625 10.7697771 8.5792820 10.2802826 10.2615795 6.7435244 1.3135361 9.2971891 6.0802505 10.6528920 6.0262556 11.3545875 5.5530041 10.4995135 8.8876048 7.3603573 13.8061411 10.6004796 10.0985351 12.3131454 10.8612882 -0.8564760 NA 10.1072304 9.3718293 9.0542546 TCGA-C8-A12Z 45 0 NA 382 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma 2 asian not hispanic or latino 3 2 4 NA 5 1 2 2 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 1.213791e-06 3.121176e-07 22.7272727272727 43.1818181818182 2.27272727272727 18.1818181818182 13.6363636363636 9.50333462 10.48464277 11.63563061 10.07191387 7.85850077 10.02910484 10.32955587 9.81506142 10.99127268 13.52287265 10.43631355 10.62376574 2.14577526 18.36629954 4.73074320 8.97585771 5.12560564 8.25430728 8.51888955 13.13051757 2.43528188 12.87152760 8.05800688 8.87494263 11.19532871 6.97585714 1.97585026 7.78642908 10.31180620 -1.02414974 8.37460134 9.42397392 NA 4.40212184 9.98778372 10.78321255 9.11796459 11.53308201 10.42345747 11.17767529 12.82653286 9.82448052 15.07327258 6.76304235 9.72655622 10.66367070 11.18744184 4.80874542 3.29779303 8.86307831 12.42113121 -0.02414974 11.51550116 3.29779303 3.49942497 4.70377625 10.63272935 11.89899942 10.17736896 11.60202296 12.86792607 7.56831490 10.53092606 9.13320465 11.31848796 10.86155400 5.16568286 12.43054251 9.43118479 -1.02414974 10.10642815 9.54571320 1.97947664 4.06332173 11.15109533 10.36871172 9.40944313 10.03992674 NA 9.94811956 12.84795534 11.00583497 10.31347953 8.33999248 1.6328000 1.3193000 0.2259200 0.0102850 -0.0121620 0.0781500 0.0084743 0.0084743 -0.7123900 -0.7123900 2.6861000 0.0549450 0.0319990 0.0216030 0.0216030 0.0366530 -0.0226060 1.3226000 0.0690950 0.0098669 0.0509610 -0.6432100 3.6569000 0.5438300 2.0682000 -0.5784400 -0.5693200 0.0642250 -0.5995400 -0.6605900 0.0235660 -0.0151870 -0.6834200 0.3792400 -0.0357660 -0.0357660 0.0084743 0.0084743 0.0084743 0.0144700 -0.6490300 -0.7123900 -0.0078863 -0.7104200 0.0126550 0.1389500 0.0319990 0.0393370 0.0216030 0.0216030 0.0185230 0.0185230 -0.0226060 -0.6497000 -0.4187100 -0.0028684 0.0098669 0.0098669 0.0509610 -0.6666100 -0.6432100 -0.6175800 -0.6598400 -0.5290000 -0.5693200 0.0642250 0.7192300 0.1311000 0.1311000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.110 -0.557 -0.618 -0.618 -0.670 -0.670 -0.578 -0.578 0.000 1.259 0.000 0.000 0.719 0.131 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.110 -0.557 -0.618 -0.618 -0.670 -0.670 -0.578 -0.578 0.000 1.259 0.000 0.000 0.719 0.131 0.000 0.000 0.000 0.000 -0.671 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.000 0.000 0.000 8.6411934 7.9673796 6.3595616 10.5933251 12.6146329 5.2150262 12.2638585 8.4820262 6.3157075 NA 10.9772658 11.3067437 0.5608128 2.4352819 1.7832052 7.8119083 2.4352819 10.4383599 11.8816207 11.9919695 9.5409597 1.5608128 8.1357288 9.7223719 5.3852481 3.4352952 2.6762900 -1.0241497 11.5636352 4.9982271 7.8737031 9.0646458 8.6179093 10.0167364 10.9755054 NA 7.3508968 NA 7.4677107 13.2637143 5.4994186 9.1217899 NA 7.9124954 9.1294098 2.5608128 2.9758503 0.5608128 2.4352819 5.1051417 0.5608128 12.7810977 1.2977784 6.5831881 10.7727085 9.7473471 3.6763013 9.6115758 11.8128942 7.4311850 2.2977784 3.0633131 11.3290045 2.1457753 NA 1.7832052 2.7832052 11.763899 6.020251 9.120516 18.366300 10.601055 11.370588 13.130518 9.763760 9.642969 11.042620 13.818012 10.519856 8.863078 9.383125 1.297778 7.978673 11.655118 11.5321242 12.9260490 5.7037790 15.2428987 8.6500501 4.4352885 8.7307452 8.4515911 10.7783458 4.0633217 7.3334094 10.4363135 5.5457120 1.9758503 10.6995186 8.4616869 6.7398670 12.0104847 10.3627978 11.6228663 8.2118718 8.8721901 10.8763471 4.6197123 9.8751314 9.1179646 10.3140369 10.2397137 11.3849834 10.3449097 10.4373371 11.2049769 10.0236632 0.9758503 9.5598524 8.2604040 12.4211312 4.6762956 11.5155012 7.4475329 10.5845745 10.6327293 7.4393821 13.5764094 9.8174220 10.6836481 13.5491498 9.9278708 -1.0241497 NA 10.1205159 11.2106751 9.5457132 TCGA-C8-A130 52 0 NA 370 breast stage iiia t3 n2 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 2 4 NA 5 2 5 2 1 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6.935946e-07 4.508365e-07 30.3030303030303 15.1515151515152 6.06060606060606 24.2424242424242 24.2424242424242 9.6376834 8.9553439 11.6709753 7.9728845 8.9082587 8.8055449 9.7889304 9.5607497 10.5891057 12.7233258 9.7289016 10.4171799 1.1871343 13.0757125 2.0616380 9.7366233 6.5150864 8.0575245 10.6338982 12.5251530 -0.3978282 12.4518953 7.9902140 10.2288187 11.2937225 6.4414005 0.6021718 8.4366208 10.8441802 4.4350885 7.5240378 7.0779309 NA 5.5563926 9.3267108 10.3339403 9.8073794 9.6141231 13.7680462 10.7090871 5.8501243 11.7295466 14.4806791 6.5074633 9.5388349 10.9867110 10.6335536 3.3570875 4.5794759 8.6816819 9.9875203 0.6021718 10.9880594 5.1099915 5.6465918 4.4601790 9.7061404 11.9389825 9.6369959 11.6860088 12.3009017 8.3267108 10.6127251 9.9337467 11.2379152 10.6655921 3.8876033 12.5306229 11.1913800 1.9241379 10.6144724 10.0895347 4.9948557 4.6021956 9.0492803 9.6183090 10.0316038 10.6311391 3.8116457 7.1139494 12.3870363 11.1855149 10.3190166 9.8554536 0.35517000 0.39546000 3.52160000 0.39413000 -0.01106000 0.38403000 0.35969000 3.65690000 -0.45093000 -0.49324000 3.65690000 0.28311000 0.45683000 -0.01409000 1.56470000 -0.02990200 1.83280000 1.24380000 -0.04400900 0.37693000 0.34356000 -0.46323000 0.67808000 0.67808000 0.85918000 0.25277000 0.91784000 0.36821000 -0.00013862 0.00110930 -0.29485000 -0.46199000 0.38072000 -0.00138580 -0.45125000 -0.45125000 0.35969000 -0.43127000 0.18328000 0.03087300 0.29390000 -0.04115900 -0.54666000 -0.41443000 -0.41443000 -0.47152000 0.45683000 0.54488000 -0.88812000 0.63080000 -0.08744700 -0.86082000 0.34990000 -0.45758000 -0.08889300 -0.06625200 0.31964000 0.31964000 -0.81770000 -0.08903700 -0.11024000 0.67808000 -0.41113000 -0.55417000 0.25277000 -0.49902000 -0.84139000 -0.09179100 -0.07867700 0.283 0.457 0.000 0.000 0.350 0.350 0.000 0.320 0.000 -0.133 -0.432 0.154 0.265 0.000 0.000 0.859 0.859 0.000 0.354 0.368 0.368 0.299 0.000 0.322 0.322 0.000 0.000 0.000 0.000 0.384 -0.067 0.346 0.346 0.000 0.000 0.670 1.080 -0.414 -0.414 0.280 0.000 0.283 0.457 0.000 0.000 0.350 0.350 0.000 0.320 0.000 -0.133 -0.432 0.154 0.265 0.000 0.000 0.859 0.859 0.000 0.354 0.368 0.368 0.299 0.000 0.322 0.322 0.000 0.000 0.000 0.000 0.384 -0.067 0.346 0.346 0.000 0.000 0.670 1.080 -0.414 -0.414 0.280 0.000 8.5373621 -0.3978282 6.5965506 11.0347389 12.3783216 6.6072045 10.6689590 9.2737203 9.7303268 0.6021718 12.3075054 11.6496380 5.0616293 1.6022193 4.5794759 9.0616288 4.0940502 10.2205826 12.0866423 10.2532488 8.8067681 4.5090877 8.4848402 10.0631648 6.4476866 5.3966116 0.1871343 NA 10.2338289 5.5679804 6.7107210 9.7777467 7.9685193 10.7798533 9.8829678 2.4095539 9.9173466 3.7721179 7.3232962 12.0829872 8.5461768 8.5299751 1.1871343 4.3570875 7.3335159 NA 4.1567849 1.1871343 5.6021985 6.4161067 2.1871660 10.7022023 -0.3978282 8.3215859 10.5755357 10.1620521 5.3570839 9.7994137 12.1295519 7.5880392 3.0616207 4.2460508 9.4756412 4.2746195 -1.3978282 1.6022193 2.8501193 12.227781 7.702859 8.997731 13.075713 9.515086 10.609575 12.525153 11.869423 8.908566 11.218746 12.532010 11.001742 8.681682 10.132603 3.460179 8.307829 10.474102 10.3436640 12.4261613 5.8406017 12.7183745 8.9275024 7.1257585 8.8841272 10.0497968 9.7914595 6.3026371 5.6465918 9.7289016 5.9772364 0.6021718 10.8539753 7.1020429 8.2737914 10.3309678 9.3819164 10.8322175 8.3769840 8.1040341 8.9772364 5.8116508 11.5696503 9.8073794 10.3982366 11.0495386 10.6949542 9.7633289 10.5933645 9.6709754 7.9442716 2.3026408 9.3819329 6.8067687 9.9875203 6.0860131 10.9880594 6.6190050 10.8419954 9.7061404 7.3232962 13.6649600 10.5912367 9.4327123 12.4018834 10.7455802 2.1871660 -0.3978282 10.0850050 9.7538479 9.3394443 TCGA-C8-A131 82 0 NA 411 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma 4 asian not hispanic or latino 3 2 4 NA 5 1 5 6 2 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 1.109751e-06 4.161568e-07 25.531914893617 23.4042553191489 2.12765957446809 36.1702127659575 12.7659574468085 10.11033949 8.59406068 10.90806171 7.67951388 8.08946266 9.35100944 8.72452374 10.56731385 11.70073508 13.64188051 9.82438759 10.59406049 3.40423556 12.02128594 2.94480224 11.42609924 4.87553927 8.50704694 4.30235561 11.84585977 -1.05529145 10.34994585 2.64524051 9.54057463 11.34140913 7.13956158 3.19273074 10.13090617 10.95917359 2.64524051 8.18320908 7.76817175 -1.05529145 4.77769324 8.16155014 10.60524596 9.13462885 9.32958805 9.10593626 10.29684774 10.54378730 8.77927548 15.08705104 6.30402726 9.73025682 10.67951397 10.22557511 2.85169908 5.05332859 8.33926702 11.52576949 -0.05514155 10.80666666 3.98920260 5.85169408 4.85169408 10.76218776 11.69404528 9.84037967 11.45976490 12.43477770 8.52976669 11.13432010 10.03046934 11.04119006 10.07730403 3.26672658 11.51987082 10.55305921 4.15425915 10.17722530 8.91778409 3.53636379 3.40423556 11.58459723 9.80821626 9.11848146 10.00617556 NA 10.49651258 13.11785681 11.42811632 9.93206841 10.17181855 0.5037700 0.4911300 -0.0153290 -0.0055375 0.0663720 1.6762000 0.0567980 -0.1106000 -0.4631200 -0.4631200 1.2782000 0.6295200 -0.0145030 -0.0113350 0.5404800 -0.0157410 -0.2118100 -0.2156500 0.1790500 -0.0100940 -0.0129890 -0.2027400 -0.2027400 -0.2027400 0.0237060 0.0237060 0.0237060 0.2166800 -0.0103700 -0.1909900 0.1981700 -0.0153290 0.0663720 0.0663720 -0.4459900 -0.4459900 0.0567980 -0.1106000 0.0859430 0.4106100 -0.0193140 -0.4631200 -0.1500300 -0.1500300 -0.1576400 -0.1469500 -0.0145030 -0.0145030 -0.0113350 -0.0113350 -0.0157410 -0.0157410 -0.2118100 -0.2156500 -0.2156500 0.1790500 -0.0100940 0.0577960 -0.0157360 0.2142200 -0.2027400 -0.2027400 -0.0490190 0.0237060 0.0237060 0.2166800 0.4057700 -0.1651600 0.0130740 0.630 0.000 0.000 0.000 -0.216 -0.216 0.179 0.000 0.000 0.224 0.224 -0.203 -0.203 0.000 0.000 0.000 0.000 0.000 0.491 0.217 0.217 0.217 0.000 0.236 0.236 0.000 0.000 0.000 0.000 0.000 -0.446 0.000 0.000 0.411 0.000 -0.463 0.776 -0.158 -0.158 0.000 0.000 0.630 0.000 0.000 0.000 -0.216 -0.216 0.179 0.000 0.000 0.224 0.224 -0.203 -0.203 0.000 0.000 0.000 0.000 0.000 0.491 0.217 0.217 0.217 0.000 0.236 0.236 0.000 0.000 0.000 0.000 0.000 -0.446 0.000 0.000 0.411 0.000 -0.463 0.776 -0.158 -0.158 0.000 0.000 8.70967594 NA 7.36265661 11.32201488 11.98269442 5.96417218 11.08435571 9.86377185 8.91188658 NA 13.48384196 12.12328713 1.52977098 NA 3.11473348 8.09708928 3.46836175 9.25655263 11.22702406 10.54192578 9.12595661 1.75214913 8.11973019 10.21334631 5.87554172 2.40424918 6.95603109 -0.05514155 10.65388818 0.94478350 5.51465883 8.18081870 10.10215130 9.89886255 10.48299325 1.75214913 9.40628389 NA 7.44065908 12.37825938 7.89608896 8.43465241 0.94478350 6.42861979 7.83658819 3.11473348 4.67272517 NA 4.52976474 3.03396914 1.94482097 11.59068790 5.03226838 9.39807498 10.76098801 9.33712167 4.75215983 9.45160780 11.29601969 8.51655692 0.94478350 3.52977098 9.76418507 3.26672658 -1.05529145 1.75214913 4.07408579 12.531264 7.440659 8.842650 12.021286 9.946213 10.837727 11.845860 8.917784 9.150598 9.764185 13.202192 9.902632 8.339267 9.470325 7.790294 7.178424 11.633055 10.961613 12.787646 6.220930 14.638127 11.273188 7.349946 8.624284 8.662481 10.058234 6.588661 5.053329 9.824388 9.841893 NA 9.662481 10.083076 7.832055 12.913111 9.934908 10.965784 8.275721 9.476186 7.311126 5.617231 10.259291 9.134629 10.102151 10.040861 10.640902 9.638291 8.706355 10.221510 7.933489 8.724524 9.999544 7.641772 11.525769 6.248584 10.806667 7.659050 10.420031 10.762188 7.445288 13.597257 10.005500 10.148764 12.153191 12.440035 2.404249 2.114733 10.572794 9.602123 9.267859 TCGA-C8-A132 56 0 NA 383 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma 1 asian not hispanic or latino 2 2 1 NA 6 1 3 4 4 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.81477e-07 10.8695652173913 28.2608695652174 8.69565217391304 30.4347826086957 21.7391304347826 9.7401390 10.4063569 11.9955544 10.0590678 7.9735619 9.4392252 10.4186178 10.3604870 9.8371104 14.4979424 10.7466375 11.1378121 4.2417563 17.1743115 3.7563295 10.1676604 3.9489746 8.5884977 8.6100415 13.0867997 -0.3729535 12.9675239 4.8364998 9.0611965 11.1801972 6.9977350 -0.3729535 11.6340752 10.4709689 1.7969715 7.6877438 8.2545818 0.2120090 5.4344014 10.3592153 10.3621808 8.5429274 12.0208406 10.4768439 11.3447243 5.6043264 11.4528017 14.9106427 8.7265271 9.6639083 10.4858060 11.9306860 6.2195054 3.8749740 9.3387148 11.5976931 0.2120090 10.9604828 5.5339371 7.2343787 4.5339371 10.7306636 11.9070936 10.6469861 12.4824031 12.9060055 7.5841500 10.7078655 10.2130760 11.0398823 11.1978523 4.9124487 12.5683707 10.9920033 0.9489746 10.5895824 9.4623088 4.7157836 5.5812428 10.5537145 10.5335628 9.7459890 9.8019736 3.1506084 9.0946533 13.3935251 11.7894392 10.5399372 9.6542628 -0.0053992 -0.0053992 0.0317180 0.0850760 -0.0384420 0.0857990 0.1280000 0.0982160 0.1244700 0.1244700 0.1244700 -0.2073400 0.3772600 1.2673000 0.1472600 -0.3445800 0.0513870 0.0513870 -0.0194520 0.2728500 0.1137400 0.1852500 3.6569000 -0.3383700 -0.1208200 -0.1208200 -0.1208200 0.5686300 -0.0053992 -0.0053992 -0.0878440 0.0395000 -0.0384420 -0.1338000 0.0857990 0.0857990 0.1280000 0.0982160 0.1118400 0.0151680 0.0151680 -0.5876800 -0.1722100 -0.2590200 0.1106400 0.1206400 -0.2831100 -0.2831100 -0.3283200 0.1472600 -0.3489300 -0.3489300 0.0513870 -0.0650970 -0.1001300 -0.0085766 -0.3442300 -0.3527000 0.1137400 0.1213800 -0.6322500 -0.3316800 -0.0069195 -0.3529300 -0.1208200 0.6030400 0.1331700 -0.3257700 -0.3433100 -0.207 -0.207 -0.328 -0.328 -0.100 -0.100 0.000 0.113 0.114 0.121 0.121 0.185 0.185 -0.137 -0.315 0.000 0.000 0.000 0.000 0.102 0.102 0.133 -0.326 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.588 -0.463 0.111 0.111 0.000 0.000 -0.207 -0.207 -0.328 -0.328 -0.100 -0.100 0.000 0.113 0.114 0.121 0.121 0.185 0.185 -0.137 -0.315 0.000 0.000 0.000 0.000 0.102 0.102 0.133 -0.326 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.588 -0.463 0.111 0.111 0.000 0.000 8.330951 NA 5.569561 9.993916 11.090061 6.946585 11.041469 9.937706 8.258552 1.627046 11.799944 11.445770 3.485027 2.327486 2.434401 7.414951 6.592832 11.492588 11.309165 10.861566 8.918219 4.485027 8.356669 9.909557 8.110864 5.703865 4.533937 -1.372954 10.576510 6.497413 7.437620 7.371882 7.208248 10.527160 10.138306 5.212009 8.466252 NA 8.249100 12.320317 7.884436 7.530930 NA 2.086478 8.004259 NA 4.604326 0.212009 7.703863 7.664101 4.604326 10.575780 -1.372954 9.233453 10.519211 9.842581 6.320535 10.358367 13.150671 8.761474 4.381934 4.756329 11.150855 2.086478 NA 1.212009 2.874974 12.845899 5.903173 8.753752 17.174311 10.460333 10.488135 13.086800 12.503565 8.691400 11.265710 13.206305 9.976329 9.338715 8.816873 0.212009 7.154524 12.210013 11.618215 12.191436 6.776795 13.699303 9.303886 8.027928 8.957965 8.225100 11.460652 7.984600 9.325752 10.746638 7.006426 2.327486 10.617861 7.930828 8.294071 12.131743 10.694146 10.534314 8.458355 8.368515 11.369147 7.914760 11.605694 8.542927 10.247726 10.120403 11.406972 10.654263 10.005885 11.053575 9.186425 3.086478 9.398603 8.252757 11.597693 8.627048 10.960483 7.872600 11.503642 10.730664 7.469398 13.776119 10.317046 10.058023 12.412092 10.605401 4.649414 2.986702 10.495099 10.182116 9.951228 TCGA-C8-A133 65 0 NA 0 breast stage iiia t3 n1 m0 female 2010 NA NA other, specify NA white not hispanic or latino 1 1 3 NA 5 2 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.733986e-07 10 30 0 40 20 9.4970952 9.4137525 11.1364729 8.6193950 8.2468551 8.6226262 10.7831969 9.2405598 10.7624750 12.8598120 11.1251265 10.4637032 NA 12.3758391 2.1404188 9.2922008 8.2278859 7.6702441 7.7373582 13.3668956 1.9884120 14.6778357 1.1404515 9.8409392 10.4975352 8.9257123 -1.1814766 10.6498023 12.9756051 NA 6.4979748 5.0083210 0.8185234 1.9884120 9.1989562 9.9909225 11.7701441 8.6639850 9.0181673 10.3532842 -1.1814766 10.9532422 14.7755971 7.0350465 10.6632009 11.0406862 10.2588452 1.9884120 5.0852802 8.4496720 10.9052948 -0.1814766 10.7121758 2.4034586 3.4623534 3.5733866 10.2326518 11.3467050 10.8283237 10.0747037 12.1121104 8.2840616 10.6612382 10.4753668 10.1782447 9.8919673 3.5733866 11.5947225 11.9051289 NA 10.5262856 8.5750513 0.8470348 4.1039004 10.3508510 9.5067453 10.7388480 8.9217829 0.8185234 9.6576989 10.8680033 10.6426583 10.0963636 9.1505318 -0.00553750 -0.00013862 0.00000000 0.00000000 -0.00180140 0.00000000 0.00291330 -0.00290910 0.00139230 0.00139230 0.01251600 0.88966000 -0.00542040 0.00027728 0.00027728 0.00027728 0.00903120 0.00610900 0.00110930 -0.00443120 0.00055459 -0.00277070 -0.00277070 -0.00277070 0.00013863 0.00013863 0.00013863 0.00194180 -0.00069303 -0.00553750 0.00013863 0.00000000 -0.00180140 -0.00180140 -0.00433040 -0.00433040 0.00291330 -0.00290910 -0.00290910 0.00022419 0.00499690 0.00139230 -0.00569120 -0.00569120 -0.00415460 -0.00415460 -0.00542040 0.00097064 0.00027728 0.00027728 0.00027728 0.00027728 0.00610900 0.00610900 0.00610900 0.00110930 -0.00443120 -0.00443120 0.00055459 -0.00193990 -0.00277070 -0.00277070 -0.00027724 0.00013863 0.00013863 0.00194180 0.00180300 0.00763920 0.00763920 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.1302434 NA 3.5733866 10.9033034 11.9299568 9.1444077 12.1645932 7.4480337 9.8791910 NA 11.9157042 12.1783339 1.1404515 2.2779253 1.1404515 7.9707800 3.1404188 9.6362782 11.1580668 9.7536602 9.6725843 1.6258316 7.4368806 10.6382750 4.9059574 5.1760475 NA 0.8185234 8.5616465 4.5189379 3.7253813 8.7403360 3.2779253 9.7238218 9.2830409 4.4034586 7.8297221 NA 6.0473137 13.0855744 5.6513847 7.1760475 NA 1.1404515 8.3223207 1.8184825 1.9884120 5.5049953 1.9884120 4.3170652 -1.1814766 10.4428336 2.7253922 6.1494118 10.4396312 9.6803574 2.8185029 8.0400820 13.4492741 6.9112518 0.4034859 0.8185234 11.1929912 2.8185029 NA 3.7726880 1.1404515 13.9274254 5.1760475 9.0340280 12.3758391 10.3435020 11.1619584 13.3668956 12.2922008 8.9125726 9.9777357 12.3515814 11.6588796 8.4496720 8.3361646 0.8185234 7.2405595 9.3262897 10.894643 12.749879 6.511982 12.825342 8.945199 -1.181477 8.728388 7.911252 9.614015 5.326289 8.887273 11.125126 7.887274 -1.181477 9.999647 2.725392 6.181755 9.440547 9.466853 11.260661 9.464153 10.092291 10.142676 1.988412 8.830058 11.770144 10.323810 9.927673 11.122561 7.349877 9.729887 10.097525 8.728388 NA 10.057443 5.277925 10.905295 2.518938 10.712176 1.140451 10.971730 10.232652 6.342057 14.148677 11.155559 10.460998 13.008397 9.123417 NA NA 10.024288 9.830421 9.338131 TCGA-C8-A134 52 0 NA 383 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 3 4 NA 6 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.254182e-06 6.589149e-07 4.59770114942529 14.9425287356322 6.89655172413793 42.5287356321839 31.0344827586207 9.5923051 9.3483794 11.0573748 8.6979757 8.7499964 9.6504862 7.7620099 10.3410961 11.6993546 14.1223059 9.9485725 10.3299830 1.9305103 11.4700089 1.4610570 9.2822023 5.1004521 8.4549597 9.5411417 4.9204743 -0.6544901 10.2282075 9.5146543 9.4369998 11.0864695 6.3151912 1.4610570 9.5399110 11.5300266 1.5679348 8.6193602 7.1678697 -2.2392255 4.8374185 9.6474417 9.3436847 9.3465033 10.5621083 9.4829826 11.6337576 4.6060928 7.1269243 15.6973262 8.0075684 8.7507060 10.6835579 10.6552303 4.2841662 -2.2392255 8.7836632 11.6176110 -2.2392255 8.4662343 4.6060928 6.4188140 5.9103489 8.7995209 11.9509668 9.9151036 9.5558300 12.7951001 9.3351954 12.1533889 11.0083233 11.8516240 10.7166150 4.2200358 12.0542173 8.7075082 0.5679348 10.5821766 10.1148514 3.5646099 4.5419608 11.0501886 10.7519467 10.4501632 10.4358974 0.5679348 7.6719939 12.6499633 11.9858094 10.2459282 8.6271081 0.0345360 -0.0318640 0.0765660 0.0793030 -0.0090615 0.0788710 0.0781500 -0.5740700 0.0454240 0.0454240 1.0855000 -0.5383300 0.0619370 0.0242680 -0.5183500 0.0109820 0.0356650 0.0180080 0.6014200 -0.5319500 0.0409530 -0.5095000 -0.5095000 0.0679480 0.0496820 0.0496820 0.0502500 0.6229700 -0.5051500 0.0345360 -0.5588700 -0.5444100 0.0511030 -0.5422900 0.0332670 -0.5687200 0.6684500 -0.0165670 -0.5375400 -0.0098185 0.6162500 -0.5629600 0.0322810 0.0322810 0.0322810 -0.5165100 -0.8269200 -0.3876100 0.0676610 0.0438650 0.0358060 -0.5509300 -0.5175300 0.0432990 0.0784380 0.0164250 -0.5094000 -0.5094000 -0.5317100 0.6627200 -0.5095000 0.0679480 -0.5413800 0.0496820 0.0502500 -0.5408800 -0.0247980 -0.5155800 0.0400440 -0.538 -0.538 0.000 0.000 -0.518 0.000 0.462 -0.509 0.000 0.000 0.000 -0.509 0.000 -0.546 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.551 0.000 0.000 0.000 0.509 -0.563 -0.065 0.000 0.000 0.000 0.000 -0.538 -0.538 0.000 0.000 -0.518 0.000 0.462 -0.509 0.000 0.000 0.000 -0.509 0.000 -0.546 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.551 -0.551 0.000 0.000 0.000 0.509 -0.563 -0.065 0.000 0.000 0.000 0.000 9.875971 4.989421 8.476564 10.242149 11.991898 6.596084 9.435236 9.982189 8.282497 NA 11.738597 11.488461 2.889882 NA 4.667495 9.415685 4.299758 11.183192 11.692724 10.742883 9.687639 3.804993 9.272355 10.063241 6.837417 3.515485 2.805003 -2.239226 10.540937 3.930529 6.545236 7.588739 7.936775 10.275272 10.276794 4.474845 8.837418 5.260447 8.650866 12.468500 8.438322 7.252455 -1.239566 2.082532 7.553392 2.461031 2.515485 NA 6.334248 2.221351 8.418814 11.080415 2.889882 12.162681 11.290764 10.469470 5.186865 10.014154 13.816943 8.416132 6.737881 4.541961 10.690600 1.220020 8.880191 2.152930 5.630967 9.771480 9.302183 8.790579 11.470009 10.708571 10.859950 4.920474 10.666741 9.247437 10.348848 12.560339 10.745732 8.783663 8.059810 NA 8.009716 11.265917 10.2873457 11.6253685 5.2282069 13.8120422 8.2169563 6.2363357 9.6539036 5.4817026 9.3633008 6.7206041 6.3151912 9.9485725 10.4927694 2.0825323 9.8179169 6.7089694 10.2897128 12.8085779 11.1459251 10.1068386 7.4936169 9.5489124 9.3502530 6.3605153 10.6068739 9.3465033 9.9349035 9.8982336 10.7831431 9.9960179 11.3183050 10.2343077 9.3917791 NA 9.8252369 6.8450911 11.6176110 6.8022617 8.4662343 6.9128869 10.1418745 8.7995209 7.9666883 13.6598172 10.0082328 10.8749950 13.1643130 11.6116677 2.7147950 0.3455099 10.6883799 9.1060072 9.1715831 TCGA-C8-A135 64 0 NA 393 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma 1 asian not hispanic or latino 2 2 4 NA 4 1 2 6 5 2 5 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.075072e-06 3.121176e-07 34.8837209302326 18.6046511627907 2.32558139534884 25.5813953488372 18.6046511627907 9.3980048 9.8335897 11.6048990 8.6832048 10.0887089 9.3509290 10.0534817 9.8724089 10.7584382 13.8667234 9.9074446 10.8354101 0.4672795 16.5560902 3.2042346 9.9684412 5.5965506 8.9999482 8.3169331 12.8682358 NA 11.2266009 3.4058699 9.0175782 11.9292584 7.7309279 1.4672795 9.3324233 10.6595603 -1.1177874 10.1624957 7.0218561 NA 5.6636634 9.6480054 10.7375628 9.6136239 10.0776772 10.0528560 10.7211149 -1.1177874 9.7518988 15.2244491 6.8506257 9.9396198 10.7024839 10.5918196 4.2746195 1.2042033 9.0345899 12.1044961 -1.1177874 11.3638522 4.3085720 6.1014736 4.8364998 9.5216456 12.0789071 9.7816618 12.1728998 12.5155273 6.3417367 10.5542882 9.8233526 11.1700174 10.9301105 4.2398563 11.3570249 9.5991244 5.2221554 10.1443998 10.2486272 3.2787431 5.7771225 9.1171223 9.4330517 11.1977376 9.9631225 1.4672795 9.1803674 14.3334195 12.6215582 9.9986490 9.9143507 0.2303500 0.2303500 -0.2482500 -0.2482500 0.0610790 0.3868400 0.0462750 -0.3278500 -0.3471000 -0.3471000 0.7802200 0.0502500 0.0502500 -0.3271600 -0.1469500 -0.1469500 0.0878240 0.0878240 -0.3036900 0.0526680 -0.3389400 0.3268900 3.6569000 0.6017800 -0.3567000 0.0283410 0.0283410 -0.0321780 -0.1437900 -0.1437900 0.0329860 -0.2482500 -0.3745100 0.0610790 -0.1351000 -0.1351000 0.0462750 -0.3278500 0.0465590 0.0461330 -0.3655600 -0.3471000 -0.0081624 0.0000000 0.0000000 0.0000000 0.0502500 0.0373590 -0.3453800 1.5235000 -0.1469500 -0.1469500 0.0878240 -0.3454900 -0.3454900 -0.3280900 0.0526680 0.0423070 -0.3389400 -0.1456700 -0.3469800 -0.3513300 -0.3300600 -0.3567000 0.0283410 -0.1787900 0.4231800 0.0421660 0.0481200 0.000 0.000 -0.327 -0.122 0.000 0.000 -0.328 0.000 -0.339 0.000 0.000 -0.347 0.000 -0.340 -0.340 -0.357 0.000 0.087 0.230 0.000 0.000 0.423 0.000 0.000 0.000 -0.248 -0.248 -0.326 0.000 0.387 0.252 0.000 0.000 0.000 0.000 0.433 0.780 0.000 0.000 -0.238 -0.238 0.000 0.000 -0.327 -0.122 0.000 0.000 -0.328 0.000 -0.339 0.000 0.000 -0.347 0.000 -0.340 -0.340 -0.357 0.000 0.087 0.230 0.000 0.000 0.423 0.000 0.000 0.000 -0.248 -0.248 -0.326 0.000 0.387 0.252 0.000 0.000 0.000 0.000 0.433 0.780 0.000 0.000 -0.238 -0.238 7.6237718 7.4019410 5.9591210 10.1367432 11.9979989 5.6868226 11.6490409 9.5516773 8.0847962 NA 11.6085231 11.1302325 3.0522246 2.0522420 2.4672795 8.6880488 3.6371929 10.0396519 14.0496447 10.5373884 9.2649290 2.8823105 7.9457002 9.8379549 7.6832052 8.5635433 4.2746195 0.4672795 10.7433919 3.9267016 7.5688059 9.0090095 8.0192960 9.2669807 10.4550051 4.4970119 8.6783445 -1.1177874 8.0244122 13.8223891 6.8766581 8.1860855 -0.1176308 5.3741596 7.4291992 2.3417296 5.1302308 8.5896643 6.3169331 2.3728685 4.2042346 12.1721798 2.3417296 9.3127575 10.8123030 9.4887102 5.4822191 9.7332732 12.2536732 8.8851201 1.8822909 5.3741596 10.1177209 2.0522420 -1.1177874 NA 4.0115851 10.530213 7.111123 8.777123 16.556090 9.545863 11.052230 12.868236 9.960456 9.258430 10.826285 13.432330 12.159302 9.034590 8.493330 NA 8.655444 10.852051 11.6168029 13.1835868 5.0320523 14.9313232 8.9684413 7.0671805 8.2916961 8.1769256 10.9252912 7.1723235 6.3741579 9.9074446 7.5896639 0.4672795 10.3412241 7.9750621 7.3194328 13.5029830 10.6844174 10.6763146 9.1642349 8.8233526 9.5731761 6.5965506 12.8826105 9.6136239 11.0106215 12.1543515 10.8826571 10.2681673 8.7996770 10.5520759 9.0205766 4.5261627 9.5569034 8.7588065 12.1044961 7.1302328 11.3638522 6.7771225 10.7379521 9.5216456 7.5369411 14.1399506 10.5498600 10.3605689 11.9847728 10.8674354 0.8822909 4.0917591 10.3896041 10.8688581 9.2735485 TCGA-C8-A137 34 0 NA 379 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 2 1 NA 5 1 2 2 6 8 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.109751e-06 3.121176e-07 29.2682926829268 39.0243902439024 4.8780487804878 17.0731707317073 9.75609756097561 8.77171560 9.93010291 11.54665475 9.06853432 8.77171560 9.69337213 10.40833144 9.28049241 10.97988923 13.48276888 10.41002177 10.40041689 NA 16.94695062 3.47928231 7.97266336 6.10933548 8.69429729 5.23671455 12.44781408 1.89433274 12.62126989 6.69429798 8.88948328 11.86771179 6.93245690 NA 8.92459490 10.45110167 NA 7.40889524 7.09819425 NA 1.08698752 9.58880419 9.70993401 9.11625428 11.41872372 9.61542108 10.68501952 0.67192738 9.01177962 14.78781307 6.44319885 10.32298122 10.71221926 12.36962109 2.78741157 2.54638827 8.72901873 10.81913439 NA 11.42263647 4.94494744 2.99385548 4.54640062 10.45492775 11.85473766 10.72495026 11.15002496 12.67157724 6.93871628 11.09399426 9.87486949 10.72992123 11.00060442 4.91985490 11.94824782 8.81658787 NA 10.01548544 9.88381782 2.54638827 3.73082470 10.88988721 10.24998770 10.80806619 10.03825166 0.08691961 10.01548544 12.49064481 12.19614469 9.60168110 8.70351569 0.00624810 0.01572700 1.49670000 -0.00926660 0.00652620 0.06222300 -0.00055444 3.65690000 -0.00166290 -0.00166290 1.47810000 -0.05239600 -0.02178400 0.00986690 0.09289500 0.09289500 0.00791750 -0.00227280 0.03129500 -0.71372000 0.04925600 -0.73064000 3.65690000 -0.70505000 -0.01862800 -0.01862800 -0.00995650 0.06479700 -0.00512270 0.00624810 -0.74586000 -0.72747000 0.00652620 0.00513590 0.00000000 -0.01711600 0.02146300 -0.73249000 -0.74577000 -0.77414000 -0.00027724 -0.00505640 -0.71631000 -0.71631000 0.01265500 0.66272000 -0.02192100 0.65627000 0.00986690 0.09289500 -0.72906000 -0.72906000 -0.00227280 -0.00227280 -0.00227280 0.01684500 0.00903120 0.02034300 0.03228100 -0.71087000 -0.73064000 -0.72958000 -0.00705760 -0.01862800 -0.00995650 0.07009900 -0.64499000 0.04160000 0.00097064 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.671 -0.671 -0.683 -0.683 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.645 0.000 0.000 0.000 -0.711 0.000 0.000 0.000 0.000 0.000 -0.730 -0.730 0.000 0.000 -0.722 -0.722 -0.716 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.671 -0.671 -0.683 -0.683 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.645 0.000 0.000 0.000 -0.711 0.000 0.000 0.000 0.000 0.000 -0.730 -0.730 0.000 0.000 -0.722 -0.722 -0.716 -0.716 0.000 0.000 8.36309133 5.59476052 3.73082470 10.27555582 11.33608044 4.94966566 11.41283460 8.15442828 8.06710679 NA 13.27160993 11.15770851 0.08691961 0.67192738 3.17442240 8.54023771 2.54638827 8.62612589 10.96731583 10.26376344 8.66061421 1.40887487 9.28909094 9.75673794 5.49635689 4.86832624 3.94495212 NA 10.76115926 0.67192738 6.51323174 8.73082334 7.43126274 9.80280035 10.39871527 -0.91294457 8.37005527 NA 6.32537202 13.09188968 7.25689177 6.28663908 NA 7.24683844 7.83851125 NA 2.78741157 NA 1.67192738 3.36123497 1.08698752 11.08555744 NA 6.73082334 10.68222450 9.95656086 4.54640062 9.54742284 11.91906584 6.16378249 -0.91294457 1.67192738 10.00135217 2.89431334 NA NA 1.67192738 11.720114 8.163782 9.426817 16.946951 10.083716 11.025076 12.447814 9.029482 10.063531 10.616398 12.528614 9.804643 8.729019 8.236714 1.894333 6.759393 10.782195 11.370055 12.029115 5.828434 14.576469 9.136816 3.086971 9.276792 8.136815 10.401193 4.841852 4.546401 10.410022 7.664396 2.993855 10.504292 8.921438 6.737588 12.021026 9.637714 10.821677 8.426817 8.806356 9.446717 3.944952 11.089722 9.116254 9.985568 9.985568 10.225879 8.995360 10.712219 11.096096 8.919857 11.028748 8.478340 9.940471 10.819134 4.256890 11.422636 6.610529 10.976851 10.454928 7.562700 14.309120 11.008436 10.404945 11.675447 10.590296 NA NA 10.679424 10.790871 9.782195 TCGA-C8-A138 54 0 NA 380 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 2 4 NA 6 2 2 2 1 5 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 1.005712e-06 3.121176e-07 26.8292682926829 29.2682926829268 4.8780487804878 24.390243902439 14.6341463414634 10.665098 9.285673 10.771948 7.604986 8.793820 9.953317 9.182316 10.297498 10.049460 14.406040 10.925010 10.415058 9.888337 13.680984 2.739373 9.136964 4.208861 8.686391 9.775334 12.889315 2.900896 13.333410 2.038928 10.490020 10.823567 8.971147 3.896911 10.846988 10.998934 NA 7.966710 7.016212 NA 5.546728 8.768553 10.386000 9.529783 9.492203 9.707817 10.510608 12.281213 10.485499 14.465066 7.756883 9.845482 10.649957 10.134989 4.038937 3.038928 8.581964 10.253859 1.360870 11.199119 6.623895 7.228757 4.711357 10.580997 12.101316 10.605938 11.454146 12.987938 8.496313 10.479283 9.579060 10.722804 10.070289 3.286866 11.478763 9.188680 NA 10.382673 8.196279 6.826834 5.546728 9.495287 10.607838 8.957796 10.050160 3.739373 8.761740 12.683465 11.481098 9.563474 9.893801 0.3053700 0.3053700 0.0587950 0.0093098 -0.4604600 -0.1445100 0.1424700 0.0448570 -0.4612100 -0.4612100 0.8653300 -0.1553500 0.1077400 -0.1706600 1.2791000 -0.1682800 -0.0706700 0.1437000 0.0000000 0.4314200 -0.1582200 -0.4618500 2.0259000 0.1465200 -0.4465200 -0.4465200 0.0962340 1.5072000 -0.4590600 0.3053700 -0.4914100 0.0587950 -0.4604600 -0.4604600 -0.1445100 0.1644500 0.1424700 0.0231450 0.0448570 0.1625000 -0.1288800 -0.4612100 0.2067200 0.2039600 -0.1472100 -0.1472100 0.1077400 0.1077400 -0.5111500 -0.1706600 -0.1682800 -0.1682800 -0.0706700 0.1435500 0.1435500 -0.1518300 0.4417200 0.4417200 -0.1582200 -0.4635500 -0.1474700 -0.4417800 -0.4904700 -0.4397300 0.0962340 0.1465200 -0.1551500 -0.4538300 -0.4538300 -0.155 -0.048 -0.171 -0.171 0.000 0.144 0.000 0.442 -0.158 0.075 -0.439 -0.147 0.000 -0.490 -0.490 -0.447 0.000 -0.468 -0.243 0.716 0.716 -0.155 -0.454 -0.106 -0.106 0.000 0.000 -0.460 -0.460 -0.145 -0.145 0.000 0.000 0.002 -0.144 -0.447 -0.447 0.204 0.057 0.000 0.000 -0.155 -0.048 -0.171 -0.171 0.000 0.144 0.000 0.442 -0.158 0.075 -0.439 -0.147 0.000 -0.490 -0.490 -0.447 0.000 -0.468 -0.243 0.716 0.716 -0.155 -0.454 -0.106 -0.106 0.000 0.000 -0.460 -0.460 -0.145 -0.145 0.000 0.000 0.002 -0.144 -0.447 -0.447 0.204 0.057 0.000 0.000 9.11974990 -0.96100202 5.99312861 10.90118225 11.53078545 6.78692433 10.19691079 8.69109617 10.23934672 NA 12.60641317 12.30687776 4.03893654 NA 2.49835300 7.49836417 5.03893215 12.07183904 11.35973293 10.42802584 9.92386598 1.03892777 8.82356723 10.75446540 7.73589986 6.02761632 2.36086990 NA 10.61494426 6.10502220 7.06683834 8.23860489 5.54672781 10.37406028 9.88285348 3.56249888 8.45044339 0.62386686 7.05574012 11.79068563 8.31039557 8.73241947 -0.96100202 -0.96100202 8.45889256 3.84628269 4.68278676 -0.96100202 7.70781741 6.08430880 4.39648148 10.53578616 0.03899798 9.62389484 10.54870739 10.16499150 6.38766066 10.70249046 13.55327658 8.39868214 4.82029131 5.65364191 9.44620018 2.73937289 NA -0.96100202 0.03899798 12.4641575 4.5935211 8.0389322 13.6809841 10.8161877 10.4541460 12.8893146 9.3220207 8.9046656 10.0111943 13.0665792 7.6201333 8.5819643 9.8487005 0.6238669 7.5227479 11.4602083 10.585827 13.442810 4.820291 13.470427 9.261727 7.627647 9.349545 7.418311 10.115808 7.865481 6.431250 10.925010 7.208858 3.623890 10.733726 4.530782 7.818520 10.404161 10.756609 11.368729 8.308059 9.385446 8.206351 7.616361 12.322171 9.529783 11.129706 9.916217 10.356910 9.775334 9.830095 10.199434 7.589679 2.739373 8.889432 8.031559 10.253859 8.155276 11.199119 7.426950 10.456563 10.580997 7.248386 14.105947 10.170146 10.706931 11.596875 10.612106 1.360870 7.921576 11.077851 9.823567 9.320862 TCGA-C8-A1HE NA 0 NA 375 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 3 5 4 2 4 1 5 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 3.467973e-07 10.5263157894737 47.3684210526316 5.26315789473684 18.4210526315789 18.4210526315789 10.2801743 10.0911218 11.7493228 10.1983155 8.6773831 9.3928510 10.5761943 9.3876667 9.6381434 13.2535460 10.6412930 10.5387462 2.0068366 13.4061941 4.5428957 8.4706418 7.5573350 8.1579461 10.0992497 13.7143191 1.9073137 14.7287132 6.7146645 9.7941382 11.0399008 8.1807720 -1.9002335 8.4173669 10.2582485 -0.3150915 7.3167006 6.4879718 -0.3150915 4.7438111 10.5978062 10.3971572 10.9125328 11.6520230 10.9259069 12.0248596 -0.8999643 12.0480478 14.4272439 8.9777141 9.9649142 12.0765185 11.6880834 4.9825966 4.8813122 8.9296771 12.6523833 -0.8999643 11.3728757 4.3667418 5.7072846 4.2497032 10.8280874 11.8486714 10.6352297 11.7296525 13.2678821 8.6381434 10.3136661 10.2571687 11.9032783 10.9795376 5.3667418 11.9289833 11.1283785 NA 10.1714168 9.5650105 3.0092397 5.6235157 10.7541428 10.6035317 10.1146723 10.0229104 2.0999684 10.0180722 13.4270157 11.3655694 10.4928084 8.9113291 0.57916000 0.07944700 0.07810900 0.07810900 0.00610900 0.11061000 -0.00572310 -0.00304750 0.00402430 0.00402430 0.00402430 -0.00651240 -0.00651240 0.00708260 0.00708260 0.00708260 0.00000000 0.00000000 0.00930980 0.00270190 0.01349200 -0.01230000 -0.01230000 -0.01230000 -0.00470790 -0.00470790 -0.00470790 0.01950300 -0.64180000 0.01419000 -0.00595220 0.07810900 0.00610900 -0.76372000 0.06122200 0.06122200 -0.00572310 -0.00572310 -0.00304750 -0.00180140 -0.00180140 0.00402430 -0.01876500 -0.01876500 -0.01876500 -0.01876500 -0.00651240 -0.00346270 0.00708260 0.00708260 -0.62360000 0.02988800 0.00000000 0.00000000 0.00000000 0.00041593 0.00270190 0.00944910 0.00534960 -0.79231000 -0.01230000 -0.01230000 -0.61239000 -0.00470790 -0.00470790 0.01950300 0.02020300 0.02230400 0.02230400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.612 -0.612 0.000 0.000 0.000 0.652 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.780 0.000 0.000 -0.612 -0.612 0.000 0.000 0.000 0.652 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8845891 4.5093475 5.4836578 10.1337215 11.2477953 6.5277288 11.4666864 8.4337469 8.9457660 -0.8999643 11.6864424 10.8597448 2.2698710 3.9073137 2.9073137 8.4879718 3.5593817 10.1535409 11.8831573 10.9845065 9.3401494 7.5491031 8.1264779 10.6516626 6.0128435 3.7438058 -0.8999643 NA 11.1268236 6.3667401 5.7146632 8.0585070 5.1979872 10.4381030 10.7761319 4.8548435 7.8796739 NA 7.9625918 12.6853277 8.8664833 6.9105264 -0.8999643 5.5837688 8.3106255 0.6849085 4.3478853 -0.8999643 4.2897755 6.3303110 2.9579332 10.2038978 NA 7.6391135 10.3905493 9.8278749 3.9579332 10.3617555 12.5394606 7.6274317 3.4218831 3.1443564 12.5423148 2.8548335 NA 2.0999684 -1.9002335 12.78029851 5.22923797 8.33117538 13.40619411 10.74628807 10.35940345 13.71431914 12.60359380 9.45575133 11.14673737 13.31188067 7.86150569 8.92967710 8.71558386 0.09990111 7.77237990 11.34372343 10.8594265 11.7442614 8.2711310 14.5455180 9.2188954 5.4128357 8.9032784 9.0075961 10.3092371 6.5304063 7.2673729 10.6412930 6.0306914 5.1660445 11.5151680 5.5511653 6.3061875 10.0373281 10.2591950 11.3212394 7.6679106 7.6942792 13.2028733 4.2698785 11.2249319 10.9125328 10.3320755 10.2101114 11.4642258 8.8287252 10.2240757 11.0628504 8.8380466 -1.9002335 9.1790258 6.8842291 12.6523833 4.4749941 11.3728757 6.1278602 10.6415011 10.8280874 7.3167006 13.5947787 9.6980069 10.1744304 13.2465230 10.2931717 -0.3150915 -0.3150915 10.7265761 10.9708970 9.9379764 TCGA-C8-A1HF NA 0 NA 332 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 2 4 4 1 1 2 2 2 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.935946e-07 2.427581e-07 16.1290322580645 32.258064516129 0 22.5806451612903 29.0322580645161 9.2715975 9.4457530 11.4405208 7.5994755 9.9614931 9.0323530 10.4716329 10.9132058 9.8964444 12.3961387 11.4131290 10.4515783 0.5704629 17.4069759 2.3359977 8.4579898 6.5568754 9.2085382 7.6997473 12.5899856 NA 13.3246838 0.2485348 9.8609440 10.7338625 4.5883848 1.4184598 9.6805561 11.2604624 -1.7514652 8.1311794 7.5614193 -1.7514652 5.6494171 8.9394073 10.2867694 7.4408293 10.1606771 9.7813792 10.3169787 0.2485348 9.9240524 14.7547354 6.4517864 10.6049883 9.8991394 10.6154049 4.1792722 2.3359977 8.6589876 12.8806227 -0.7514652 11.4934947 5.1065158 7.6472800 5.1792722 8.9704899 12.4766034 10.1162011 11.0021709 12.1710278 6.5839267 11.2980445 10.3068663 10.4776555 10.7622638 3.5339371 11.9512501 10.7371296 -1.7514652 10.2207981 9.1814892 2.4903647 6.0167214 10.9424588 10.2754054 10.4558557 9.2922471 1.2485348 9.1403201 12.3440981 11.5639689 9.8339683 9.1954426 0.080889 0.072253 -0.580090 0.351860 0.082188 -0.241370 0.088548 0.088548 0.057083 0.057083 0.080456 -0.016979 -0.016979 -0.242040 -0.242040 -0.242040 0.025390 0.025390 0.079303 -0.235690 -0.601490 -0.578810 3.656900 0.635180 -0.270710 -0.270710 -0.268290 0.022444 0.061222 0.080889 -0.572690 -0.588530 -0.614530 0.664770 -0.222810 -0.222810 0.088548 0.088548 0.088548 0.070181 -0.592630 0.057083 0.065370 0.065370 0.064654 0.064654 -0.016979 -0.016979 -0.242040 -0.242040 -0.242040 -0.242040 0.025390 0.000000 0.000000 -0.579600 -0.235690 -0.235690 -0.585100 -0.600790 -1.292900 -0.565050 0.068665 -0.270710 -0.270710 0.022444 -0.583820 0.036229 0.036229 0.000 0.000 -0.242 -0.242 0.000 0.000 -0.580 -0.236 -0.585 0.000 -0.583 -0.579 0.000 -0.611 0.000 -0.271 -0.271 0.000 0.000 0.000 0.000 -0.584 0.000 0.000 -0.573 -0.578 -0.578 0.000 0.000 -0.223 -0.223 0.000 0.000 -0.576 -0.576 0.000 0.000 0.000 0.000 -0.139 -0.139 0.000 0.000 -0.242 -0.242 0.000 0.000 -0.580 -0.236 -0.585 0.000 -0.583 -0.579 0.000 -0.611 0.000 -0.271 -0.271 0.000 0.000 0.000 0.000 -0.584 0.000 0.000 -0.573 -0.578 -0.578 0.000 0.000 -0.223 -0.223 0.000 0.000 -0.576 -0.576 0.000 0.000 0.000 0.000 -0.139 -0.139 8.4046192 2.3359977 6.1969040 11.2333107 12.4178350 5.7163874 10.9672832 8.7868417 8.4489443 NA 12.0744888 11.4821110 2.0558898 NA 1.4184598 8.5906110 4.6408523 11.8501910 11.1937972 10.6233041 10.1127224 NA 9.4640693 10.2663886 7.0940259 2.7079665 0.5704629 NA 9.9138722 5.6148571 7.5176631 8.2792034 6.3146258 10.3510468 10.1792737 1.7079665 8.9138722 3.6747996 7.0100872 13.0025364 7.4604248 7.4988348 -1.7514652 -0.7514652 8.6005797 -0.1665027 2.4964623 -0.1665027 7.6060883 5.3062039 3.2485348 11.7570739 -1.7514652 8.6758491 10.6338595 9.9143164 5.7642373 10.2204390 13.7463569 8.6148585 5.1792722 4.8778915 10.0249693 2.9489746 NA -1.7514652 NA 10.826274 8.360976 8.676896 17.406976 10.435888 11.416111 12.589986 8.749378 9.227690 10.223668 12.823898 9.051053 8.658988 9.397013 2.248535 8.772098 10.303480 11.0770695 12.5947037 6.1494037 14.0466276 9.0940262 7.3491989 9.5665142 8.5983704 9.6475685 7.4334118 4.6235743 11.4131290 9.7443914 -0.1665027 9.8710457 8.3570606 8.4871800 11.9005970 10.3156345 10.7804051 8.3791067 10.0861642 6.9455035 7.9350365 10.9333265 7.4408293 10.4920078 10.4017717 10.3336768 9.0461977 10.5653834 10.4106129 7.8031250 10.5805728 9.4637052 7.5784225 12.8806227 8.5094560 11.4934947 8.2597635 10.8813043 8.9704899 7.4946828 14.7849353 11.0560924 10.8669218 11.8643958 11.2324206 1.9489746 -1.7514652 10.1550511 9.4911149 9.0742900 TCGA-C8-A1HG NA 0 NA 345 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 2 1 1 1 2 1 1 1 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.629541e-07 5.548757e-07 36.5853658536585 21.9512195121951 0 19.5121951219512 21.9512195121951 10.5394204 9.5703565 10.9151960 7.4650456 9.3611205 7.5121581 9.3771151 10.3186853 9.0054269 13.1927402 10.4309736 10.4567910 -0.4479181 10.6495301 2.8740887 8.0520023 1.5521803 8.5828235 11.4932039 12.3174425 NA 13.1327683 0.5521803 10.2655429 12.1347688 6.3465722 -0.4479181 9.9008845 10.7893663 NA 8.1557826 6.0757187 NA 6.8375586 8.4163424 10.8616327 9.2085811 9.4530232 8.6685003 10.5387095 NA 9.5689647 13.7514453 7.5270297 9.6762776 10.6554441 10.6040450 2.8740887 4.8375598 8.5883301 10.6222773 NA 11.3178568 4.6814380 7.1371192 4.7220834 10.2698328 11.8314768 10.3392426 12.6595369 12.0141473 7.5063528 11.6087941 11.0559821 10.3842552 10.6587193 4.0757209 12.2294356 8.2491239 -0.4479181 10.6833703 10.9615473 1.5700743 4.8000819 10.6501884 9.8375586 10.2298760 11.8107224 4.0757209 7.1815131 11.2564923 11.1276956 9.5019830 8.6316413 0.1048200 -0.0467180 0.3525100 0.2959600 0.0335860 -0.1391700 1.7082000 0.3183500 2.4241000 1.1547000 2.4670000 -0.0406500 -0.0904250 -0.3819000 1.9362000 -0.3969400 0.0100060 0.6756700 -0.2528500 0.0076392 0.2653100 -0.3757200 0.3060100 0.3060100 -0.0279450 -0.0279450 -0.0279450 0.2794700 0.0225850 0.0225850 -0.2330000 -0.3055700 -0.0440210 0.0335860 -0.0902290 0.2477800 -0.7059600 -0.3895100 -0.4266900 0.0000000 0.0404680 -0.8019400 -0.3813400 -0.3813400 0.2888100 0.2888100 -0.0904250 -0.0765450 -0.3738100 -0.3594300 -0.3824600 -0.3824600 -0.7103300 -0.2978000 -0.3235600 -0.2393600 -0.6658700 -0.6658700 -0.0319050 -0.3669100 -0.3757200 0.3060100 0.8516600 -0.0279450 -0.0279450 0.0200320 0.0813220 0.1772400 0.1772400 0.000 0.000 0.000 -0.319 0.000 0.000 -0.253 0.000 0.000 0.273 -0.094 -0.070 0.306 0.852 0.852 0.000 0.000 0.000 0.000 0.000 0.237 0.000 0.177 -0.233 -0.233 -0.010 -0.010 0.000 0.000 0.000 0.248 -0.338 -0.338 0.000 0.000 -0.754 1.684 -0.093 0.289 -0.075 0.262 0.000 0.000 0.000 -0.319 0.000 0.000 -0.253 0.000 0.000 0.273 -0.094 -0.070 0.306 0.852 0.852 0.000 0.000 0.000 0.000 0.000 0.237 0.000 0.177 -0.233 -0.233 -0.010 -0.010 0.000 0.000 0.000 0.248 -0.338 -0.338 0.000 0.000 -0.754 1.684 -0.093 0.289 -0.075 0.262 8.2664019 NA 4.1960089 9.4116910 12.0407497 6.4903246 9.5951836 8.0219610 9.5223485 0.5521803 11.8624851 12.7258194 10.8024548 1.5521803 2.3595212 8.2067922 4.3070423 12.4120793 11.5419057 10.3826716 10.5408411 NA 8.7395086 10.2085813 7.2456430 6.0757187 0.5521803 NA 9.9498309 3.6396142 6.3070441 8.2766702 5.1960129 10.2698328 9.9423254 2.5521557 8.1742082 -0.4479181 6.5965506 12.7170633 7.8375586 6.8375586 -0.4479181 4.1960089 8.6814394 NA 3.3595071 -0.4479181 7.6343057 5.1994721 3.7220834 11.0544909 NA 8.3913600 10.5415508 10.7767610 6.2386570 9.8525089 13.7315990 8.8559371 5.2525973 4.8740838 12.5036232 10.5924461 -0.4479181 1.1371100 3.6396142 14.037290 4.978420 9.179690 10.649530 9.295308 10.654788 12.317442 13.140403 8.596551 10.115353 12.325296 11.427906 8.588330 8.359511 1.552180 7.828281 10.309546 10.818357 10.586267 5.874084 12.628468 8.909708 9.221041 8.839869 9.450002 10.084054 6.540841 8.950900 10.430974 7.203208 NA 8.778569 5.333517 8.133545 8.942325 10.297831 10.064897 8.652819 8.413243 9.140871 8.959424 9.965372 9.208581 10.266402 9.929367 10.334336 8.333516 10.785177 10.729576 7.851364 5.639620 9.063158 6.333517 10.622277 8.957298 11.317857 6.422521 11.098086 10.269833 7.217492 13.918957 11.302026 10.397646 12.334950 10.036979 3.874089 NA 10.256925 8.462049 9.523700 TCGA-C8-A1HI NA 0 NA 343 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 1 1 2 5 2 2 3 1 5 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 3.121176e-07 20.5882352941176 14.7058823529412 2.94117647058824 44.1176470588235 17.6470588235294 9.86528818 9.83821546 11.53145208 8.10383068 9.23291997 9.42494434 9.72674353 9.67880610 9.66966638 13.18793666 10.24219769 10.77121774 2.29783704 13.43815769 3.21983452 8.87724762 5.82469149 8.58128646 9.13471329 13.43175199 1.37183762 13.90309261 4.45929390 9.57579278 11.54738254 10.32690166 4.09429520 8.72938486 10.12404633 1.04990952 7.66093004 8.05412510 NA 4.33530459 9.90982785 9.49233011 10.14497224 10.28232582 9.64888782 10.63721363 0.04990952 11.14760784 13.96155436 7.05945371 9.03787938 10.33270379 10.78546097 5.12672099 4.54175642 9.18881654 11.47905009 0.04990952 10.95472762 3.40746153 5.51751192 4.09429520 10.00882006 11.99241942 11.01695102 12.15425794 12.73355750 8.12538402 10.67971689 10.28626596 11.25279397 10.56782026 3.98063772 12.04434675 11.18176189 0.04990952 10.30788191 9.33934742 3.69520323 4.44222031 10.54326000 9.67195674 10.35082937 10.12972297 4.17918458 7.43360881 12.21943849 11.64900413 9.95077167 9.18304702 0.7896800 0.7920000 0.1936000 0.1748300 -0.0490190 0.2197500 -0.0677040 -0.0536110 0.1667000 0.2102400 0.1961900 -0.3175800 -0.3018700 0.0326730 0.0150280 0.0150280 -0.3109600 0.4102800 -0.2102000 0.1952800 3.6569000 -0.2074700 -0.2074700 3.4219000 0.0000000 0.0000000 0.0000000 0.1855600 -0.0824020 -0.0731620 -0.0514510 0.1936000 -0.0490190 -0.0490190 0.2365000 0.2365000 -0.0677040 -0.0536110 -0.0536110 0.1685000 0.1685000 -0.6091200 0.0070826 0.0516720 0.0516720 0.0516720 -0.3018700 -0.2944900 0.0326730 -0.3411300 -0.3204300 0.2076300 -0.3109600 0.4102800 0.4102800 -0.2131800 0.1755800 0.1755800 -0.0546900 -0.3256500 -0.2074700 -0.2074700 -0.2943800 0.0000000 0.0000000 0.1855600 -0.0212350 -0.3326000 -0.3326000 -0.302 -0.302 -0.320 -0.320 0.099 0.410 -0.210 0.176 0.657 0.291 -0.324 1.145 1.353 -0.295 -0.295 0.000 0.000 0.000 0.790 0.186 0.186 0.000 -0.333 0.000 0.000 0.194 0.194 0.000 0.000 0.237 0.237 0.000 0.000 0.169 0.169 -0.597 -0.401 0.000 0.000 0.000 0.000 -0.302 -0.302 -0.320 -0.320 0.099 0.410 -0.210 0.176 0.657 0.291 -0.324 1.145 1.353 -0.295 -0.295 0.000 0.000 0.000 0.790 0.186 0.186 0.000 -0.333 0.000 0.000 0.194 0.194 0.000 0.000 0.237 0.237 0.000 0.000 0.169 0.169 -0.597 -0.401 0.000 0.000 0.000 0.000 9.1894562 0.8572644 5.3536867 10.1092494 12.1695756 6.6313692 11.4372491 9.1272549 9.0517987 1.0499095 12.3956567 12.0347230 3.7503492 3.0499095 1.6348720 7.6367450 3.5093411 10.5309475 11.7621095 11.6420115 9.7867296 5.8891084 8.7099009 9.8085445 5.8827946 6.1584299 1.3718376 NA 10.5440104 8.3514013 7.7863069 7.8047925 6.7399034 9.1842285 10.4928484 3.9568001 7.9294880 NA 7.7761231 12.3159594 6.5296851 6.3897544 -0.9500905 1.6348720 9.2285698 3.8312692 3.5417626 -1.9500905 4.0040968 4.6362186 2.6348720 10.0929322 -0.9500905 9.8628843 10.6192859 10.5006007 4.1791846 9.3841783 12.5948090 7.8572601 1.3718376 3.0041058 12.2171662 0.3718376 -0.3651280 2.5093411 3.4761743 12.680785 5.777825 8.896179 13.438158 10.353686 11.771218 13.431752 15.982223 9.164949 9.913704 13.417251 9.354827 9.188817 9.794318 1.857264 9.958673 11.234315 10.6819913 12.6678315 6.1996527 14.0343892 9.0257528 6.2739075 9.3819415 7.6254444 10.0973117 5.7572633 8.2110370 10.2421977 6.5851804 4.0271806 10.8006119 8.8668885 5.2146105 11.0073697 10.0371689 11.6556159 9.2678625 10.1548313 8.8938260 6.1426626 10.0200647 10.1449722 10.7852494 9.3190317 10.8091690 9.3723965 9.9710020 10.5487541 8.1817620 -0.9500905 8.9132006 7.7134628 11.4790501 6.7399034 10.9547276 6.3808212 10.7047647 10.0088201 7.0915644 13.9028001 10.6892456 10.4529169 12.2629332 9.4513179 -0.9500905 NA 10.1636470 10.5771375 9.5210719 TCGA-C8-A1HJ 53 0 NA 5 breast stage iia t2 n0 m0 female 2010 NA NA infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 2.462261e-06 7.976338e-07 5.26315789473684 13.6842105263158 7.36842105263158 37.8947368421053 35.7894736842105 9.557466 9.323632 10.988587 8.872944 9.637655 7.985850 8.468997 12.054435 10.743392 13.452464 10.668709 10.905701 1.293370 9.018360 3.186437 8.746923 8.023223 9.532446 7.568153 5.762128 NA 7.176002 6.685677 10.088536 10.714221 6.362521 -1.514161 6.766775 11.613354 3.293356 8.490224 7.995779 NA 4.733929 9.601048 10.629706 9.346315 7.460418 10.581401 10.326782 1.945420 10.102553 14.207904 7.974567 10.140640 10.292151 10.450706 3.733929 -1.514161 9.596487 11.576447 NA 11.297178 4.635749 5.985851 2.485993 10.077059 12.926224 9.545349 11.661865 13.495745 7.097029 11.336777 10.500739 11.400389 10.797185 4.062830 12.045501 10.945948 2.186437 9.694238 10.478588 4.399609 3.655924 8.777175 11.107140 10.689352 9.576778 -1.514161 5.025162 12.333061 13.097778 10.143769 9.866465 0.61016000 0.00504970 -0.69248000 0.70858000 -0.67854000 0.03008200 0.65781000 0.05713700 0.02755100 0.02755100 0.71667000 0.65119000 -0.70869000 -0.69944000 -0.72240000 0.00254960 3.22290000 -0.67248000 0.02727000 -0.70564000 0.75039000 -0.72955000 -0.72955000 -0.01775100 -0.04260100 -0.04260100 -0.07200600 -0.01114500 -0.72849000 0.02011600 -0.72770000 -0.69248000 -0.69447000 0.08570900 -1.29290000 -0.69880000 0.01913600 0.05713700 0.68782000 0.05956300 -0.73561000 0.00908420 0.03698900 0.04321100 0.04321100 -0.71936000 -0.01197200 0.00338270 -0.73544000 -0.74714000 -0.71092000 -0.71092000 0.05329100 -0.04459900 -0.04910200 -0.69709000 0.03953200 0.68280000 -0.71271000 0.01983600 -0.72955000 -0.72955000 -0.35608000 -0.71521000 -0.00990400 -0.74182000 -0.01994800 -0.00077894 -0.00077894 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.730 0.000 -0.695 -0.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.692 0.000 -1.293 -1.293 0.000 -0.686 0.658 0.658 0.000 0.000 0.631 0.631 0.000 -0.695 -0.527 -0.527 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.730 0.000 -0.695 -0.695 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.692 0.000 -1.293 -1.293 0.000 -0.686 0.658 0.658 0.000 0.000 0.631 0.631 0.000 -0.695 -0.527 -0.527 9.96780351 NA 8.36098531 11.27859099 12.13222521 5.47843150 9.31096285 8.86378919 8.58973765 -0.51395501 13.03873315 10.62969011 2.29337048 -1.51416103 3.94543915 9.40412185 2.29337048 9.45034482 11.70728902 11.52028714 9.90859452 -1.51416103 8.80454699 10.26613367 5.72440744 6.63066174 3.84355177 6.76677535 9.64650579 4.80793188 6.80793188 9.18904248 6.03289869 8.05015339 11.83085469 2.57347148 8.79548027 6.10805603 7.67829660 13.41002780 8.87294416 7.61012569 -1.51416103 4.57346542 8.40337595 3.07097316 1.65594710 0.07093882 5.75279140 2.39289439 2.29337048 11.75950824 4.24089434 10.83334853 11.54517947 11.11581598 4.04059439 10.59191256 12.93244120 9.44092729 3.84355177 3.34399047 10.68106856 2.73393998 3.44019478 NA 4.24089434 10.642403 9.193363 7.876173 9.018360 9.987841 11.533469 5.762128 11.822511 9.727987 12.297178 13.407984 12.133013 9.596487 8.820277 4.861042 8.530398 11.143099 10.266954 11.898574 5.635751 14.362041 9.254188 9.446730 9.896455 9.132563 9.257964 3.843552 4.552094 10.668709 12.101289 -0.513955 11.939275 9.871866 9.432106 11.449984 9.570812 11.405985 9.804547 7.217323 8.063433 7.144216 12.239233 9.346315 10.858869 9.847948 12.165484 10.756007 11.350771 10.255015 7.847948 NA 8.403257 7.905016 11.576447 7.097029 11.297178 5.685677 9.840253 10.077059 8.938245 15.091831 10.456110 10.583049 11.624596 11.057994 4.825852 2.264206 11.101634 10.801154 8.908069 TCGA-C8-A1HK NA 0 NA 366 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 1 4 1 1 2 6 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.31783e-06 3.121176e-07 17.0212765957447 42.5531914893617 2.12765957446809 25.531914893617 12.7659574468085 9.7409847 11.0755056 12.0866628 9.3644954 8.8936622 8.8799440 9.9690276 11.2912435 9.3007134 14.9386998 10.0150787 11.4633741 0.5853472 16.9337632 4.9310968 6.7214602 3.8583391 8.9675871 4.8077156 13.6954259 NA 11.5799124 2.4597988 9.1847031 11.8163443 9.5051798 5.3402097 7.4841768 12.0909694 NA 7.6692458 5.7418283 -0.9997115 4.7008003 10.1108440 10.6123076 9.4700025 10.6981971 10.6833553 11.6927583 12.5708094 10.5380644 13.7978196 6.7447908 9.4801409 10.9061237 11.9110034 3.8077156 5.2098159 9.1360701 11.6914499 0.5853472 11.0296479 3.5239257 5.7418283 4.2482919 9.7560829 12.4240019 9.8012607 11.2697797 12.9956862 5.2291803 11.0491882 10.9886904 11.2119449 11.0708172 5.0227273 12.2684640 11.0049324 NA 9.6269824 10.1418292 2.4584870 5.0447569 8.3644954 8.9369986 10.4145174 10.3251038 0.5853472 9.5559085 13.1213275 11.1589704 10.6842326 9.9019819 0.6168800 0.6211500 -0.7192800 0.1757300 0.6782700 0.1563600 3.4683000 0.0376410 0.2208300 0.0072217 0.7047600 -0.3290100 0.5945800 -0.2310400 3.6569000 -0.7117600 0.1535200 0.1535200 -0.2371600 -0.2235500 -0.2578800 -0.7362400 3.6569000 0.2899500 -0.7444700 0.1125700 0.1125700 0.0982380 -0.3467600 -0.3467600 -0.3961900 -0.6886200 -1.2394000 -0.2033600 0.1346400 0.1346400 -0.7382700 0.0376410 0.0376410 0.1472600 0.0093098 -1.2453000 -0.3229800 0.0000000 0.4408800 0.1905600 -0.2403400 -0.8138400 -0.2310400 -0.7430700 -0.7178200 -0.7178200 0.1535200 0.1535200 0.1535200 -1.1574000 -0.2235500 -0.2235500 -0.2432600 0.2160600 -0.7362400 -0.7280000 -0.1787900 -0.7444700 0.1125700 0.2117900 -0.6681800 -0.7559900 -0.2869100 -0.253 -0.253 -0.718 -0.718 0.154 0.154 -0.701 -0.224 -0.256 0.216 0.216 -0.712 -0.712 -0.718 -0.184 -0.632 0.113 -0.347 0.270 0.000 0.000 -0.219 -0.287 0.194 -0.339 -0.689 -0.689 -0.658 -0.199 0.135 0.135 0.000 0.000 0.000 0.000 -0.716 0.658 0.000 0.191 0.000 0.000 -0.253 -0.253 -0.718 -0.718 0.154 0.154 -0.701 -0.224 -0.256 0.216 0.216 -0.712 -0.712 -0.718 -0.184 -0.632 0.113 -0.347 0.270 0.000 0.000 -0.219 -0.287 0.194 -0.339 -0.689 -0.689 -0.658 -0.199 0.135 0.135 0.000 0.000 0.000 0.000 -0.716 0.658 0.000 0.191 0.000 0.000 8.4287207 6.2291803 5.3402097 9.8660940 11.9632567 2.9072560 10.6955890 8.6286238 8.1141031 NA 12.0850030 10.7627428 2.5853231 1.3222743 2.4597988 8.9733406 5.2671462 9.5012027 11.0164726 11.2381682 9.9560106 7.0931175 8.7915237 9.1938861 6.3666824 5.2671462 3.9072560 NA 10.5424252 6.1501088 8.8269091 7.4962155 4.2482919 8.9325756 11.1539127 2.1702776 7.7552481 -0.9997115 5.5239226 12.6213823 6.3490892 7.3840654 NA 5.8830049 8.4474441 1.3222743 2.8077259 1.3222743 5.3041423 1.3280322 1.5853472 10.9121272 2.8077259 11.0987219 11.2012593 10.2435347 4.2098120 10.1727883 13.2177884 8.1677789 3.3926746 2.7007948 10.5390347 3.0003606 NA NA 1.0003606 14.501851 4.357911 10.136711 16.933763 8.459792 11.413195 13.695426 9.171538 8.913250 11.135429 13.005459 6.658573 9.136070 7.229179 2.585323 8.219529 11.691886 1.202481e+01 1.215407e+01 7.224363e+00 1.354629e+01 9.208595e+00 6.340212e+00 1.069733e+01 7.817600e+00 1.166426e+01 4.728280e+00 1.020310e+01 1.001508e+01 8.106269e+00 2.322303e+00 1.142111e+01 9.766890e+00 8.233093e+00 1.214534e+01 1.072871e+01 1.096867e+01 5.989046e+00 7.977641e+00 9.028267e+00 7.108885e+00 1.147630e+01 9.470003e+00 1.088071e+01 9.316642e+00 1.132623e+01 9.428721e+00 1.059188e+01 1.131947e+01 8.699065e+00 4.327436e-04 8.624316e+00 1.009798e+01 1.169145e+01 7.778438e+00 1.102965e+01 5.459792e+00 1.122285e+01 9.756083e+00 7.581712e+00 1.369559e+01 1.038892e+01 1.026656e+01 1.207634e+01 1.112384e+01 2.170278e+00 4.426627e+00 1.094836e+01 1.023877e+01 9.772675e+00 TCGA-C8-A1HL NA 0 NA 317 breast stage iiia t3 n1 m0 female 2010 NA no other, specify NA asian not hispanic or latino 1 2 1 1 2 2 2 1 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.080784e-07 16 20 8 52 4 10.13562657 9.73180081 10.76556483 8.47034244 9.14815165 9.44063873 9.30238463 11.05530481 9.72301462 14.17372711 10.74574852 11.10145849 0.04614178 14.00672106 3.85352665 8.72036843 3.56973411 8.70795403 9.03911426 13.08586623 NA 13.57499640 -0.95371850 9.55990359 10.21233916 7.41249787 2.21611336 8.57357486 10.83081093 0.63115086 6.40372787 7.06298406 NA 5.09056977 9.06993036 10.09329990 9.30356387 9.25319038 9.69273475 10.72080968 11.36075931 11.37737291 14.02197924 7.69183423 9.34079679 10.46138961 10.97395403 4.25562913 2.85353663 8.84059195 10.04194315 0.04614178 11.55099505 5.70438785 5.84059164 5.50560833 10.74140437 12.43122954 10.23661806 11.79562650 12.49248399 7.09602460 11.12566085 10.73180090 11.17674662 10.52089600 3.85352665 11.86075850 9.00327812 1.63115086 9.96876038 8.79772021 2.36809782 5.47244228 10.89636291 10.13430168 9.82671579 9.49015553 0.04614178 9.01484288 11.83957615 11.06193952 10.25806436 9.62266044 0.66604000 0.94017000 0.00000000 -0.00318590 -0.36227000 0.00388540 -0.00429290 -0.00429290 -0.33491000 -0.58872000 -0.36303000 0.00263570 0.00861350 0.01084200 0.78331000 -0.73784000 0.00402430 0.00402430 0.00722170 0.03242200 0.39313000 -0.70460000 2.50180000 3.29120000 -0.30334000 -0.33722000 -0.33722000 0.00507180 -0.34979000 -0.34979000 0.00388540 0.00000000 -0.75806000 -0.03135900 0.00388540 0.00388540 -0.00429290 -0.00429290 -0.03286000 0.02286500 0.00332990 -1.20080000 -0.74768000 -0.74768000 -0.00318590 0.06794800 0.00861350 0.01153900 0.01084200 -0.69649000 -0.74584000 -0.75828000 0.00402430 0.00722170 0.00722170 0.00722170 0.03242200 0.03242200 0.00083195 0.02820000 -0.76467000 -0.69875000 0.00277450 -0.29579000 -0.33722000 0.02946600 0.01516800 -0.72888000 -0.78364000 0.000 0.000 -0.714 -0.714 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.699 -0.699 0.000 0.000 -0.675 -0.675 -0.350 0.666 0.000 0.000 0.000 -0.729 0.000 0.000 0.000 0.000 -0.758 -0.366 0.000 0.000 0.000 0.000 0.000 0.000 -1.166 -0.363 -0.744 0.000 -0.114 -0.114 0.000 0.000 -0.714 -0.714 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.699 -0.699 0.000 0.000 -0.675 -0.675 -0.350 0.666 0.000 0.000 0.000 -0.729 0.000 0.000 0.000 0.000 -0.758 -0.366 0.000 0.000 0.000 0.000 0.000 0.000 -1.166 -0.363 -0.744 0.000 -0.114 -0.114 10.08028724 NA 7.44278098 10.71106775 11.61745465 5.91863430 9.86155935 9.30651927 8.96205530 -0.95371850 12.79625490 11.58630407 3.43849247 NA 2.04617671 7.62737629 4.04617671 9.83407864 11.02881320 11.07994319 9.00472862 NA 8.89009704 10.77239417 6.39490337 4.33157625 5.82753452 NA 10.80148090 6.34079724 8.84869241 6.73966316 4.47244228 8.81270486 10.27859697 1.63115086 8.19592334 NA 7.15470066 12.10535148 8.78088551 8.31530266 0.04614178 5.06854184 8.22359535 1.63115086 4.09057401 0.04614178 4.33157625 4.13363750 -0.95371850 10.93909828 0.04614178 9.87589876 11.00109935 10.15600670 5.27499587 9.89166616 11.48548751 8.12031772 1.63115086 3.13364572 10.73617401 3.63113921 NA 1.63115086 1.04614178 13.235388 7.322300 8.587273 14.006721 10.588724 10.768130 13.085866 12.749214 8.226085 10.207938 13.207702 8.700812 8.840592 10.009072 3.438492 9.560890 11.780251 10.7453147 12.8337726 4.5389913 13.0676757 9.1362886 4.8010655 8.5539706 8.2038007 10.9372078 4.4724423 9.9311096 10.7457485 5.8916671 NA 10.5325083 6.9530661 8.4249695 10.8523229 10.4331163 11.3888064 7.0291701 9.3556524 9.5309989 4.2556291 11.3633851 9.3035639 10.6240769 9.2446212 10.8731217 10.0615911 10.7977201 10.3471006 7.7910098 NA 9.1013094 6.8843085 10.0419431 3.5697341 11.5509951 7.7672754 10.3573567 10.7414044 7.4168634 13.9379123 10.5435289 10.1952880 11.5122525 10.5687576 -0.9537185 1.6311509 10.2501358 9.6217153 9.7344263 TCGA-C8-A1HM 74 0 NA 375 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 3 2 4 2 1 2 7 2 1 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 7.525501e-06 2.080784e-06 8.42105263157895 75.4385964912281 1.75438596491228 11.2280701754386 3.15789473684211 9.5461857 9.1716885 11.2890779 8.9185696 9.0749421 9.8690271 8.8312832 10.9058086 8.6183576 14.0088530 12.0476106 10.9603091 NA 12.0917847 2.3808126 8.1478022 6.1112150 7.9657843 9.2877124 12.7710885 0.9213602 13.6175970 5.2251708 9.3094075 11.2339895 5.1502103 -1.0785637 10.4137241 11.3976301 0.5063988 8.0246782 6.0609423 NA 4.9437573 10.9015298 11.1858328 9.6148771 11.8642712 10.4122410 10.4566655 1.2433035 10.7609877 13.6673270 8.3811700 8.9739582 10.9329668 11.4515526 3.6218292 3.6762787 9.8078488 9.8025041 NA 8.8972380 5.5063512 8.7871236 5.9437573 11.0121642 12.4744194 9.4566655 10.3523654 12.9442781 7.1357093 10.0526040 9.8565552 11.3792840 10.6488852 5.5938169 13.9362824 8.9780280 NA 10.8387622 10.1173775 2.9249930 5.4759798 11.7633476 10.3581017 10.3808217 10.6866763 3.1693157 4.7542782 12.3413503 10.3429290 10.1044052 8.7871236 0.9473100 0.7113300 0.3482700 0.5743400 -0.2398500 0.4616100 0.1936000 0.4251900 0.6860800 0.3106500 0.9277700 -0.2784800 1.3789000 0.0742650 3.6225000 -0.0158790 0.5805900 -0.0096806 -0.1321100 -0.2184900 0.2316300 -0.2841800 0.1026400 1.4169000 -0.2929600 0.1764800 0.8287900 1.0009000 -0.2383800 0.0019418 -0.5075300 -0.1515700 -0.2437500 -0.7647500 0.1319900 -0.2477600 0.1936000 0.3974500 0.4094400 0.2151400 -0.2698500 -0.3916300 -0.2538200 -0.5051500 -0.0178030 -0.0178030 -0.7969500 -0.7788800 0.0742650 0.0742650 -0.0176660 -0.0176660 0.5805900 -0.0153290 -0.0153290 -0.0419740 -0.2436300 -0.2436300 -0.2435000 -0.1187400 -0.2841800 0.1026400 -0.4967300 -0.3918500 0.1764800 0.1993800 0.4944100 -0.2637200 -0.2637200 -0.278 -0.278 0.000 0.000 0.581 0.000 -0.132 -0.244 0.232 0.384 0.274 0.075 0.359 -0.497 -0.497 0.176 0.176 0.335 0.699 1.001 1.001 0.494 -0.264 0.000 0.000 -0.152 -0.152 -0.236 -0.236 0.132 -0.116 0.409 0.409 -0.046 -0.261 -0.081 0.875 -0.236 0.000 0.000 0.000 -0.278 -0.278 0.000 0.000 0.581 0.000 -0.132 -0.244 0.232 0.384 0.274 0.075 0.359 -0.497 -0.497 0.176 0.176 0.335 0.699 1.001 1.001 0.494 -0.264 0.000 0.000 -0.152 -0.152 -0.236 -0.236 0.132 -0.116 0.409 0.409 -0.046 -0.261 -0.081 0.875 -0.236 0.000 0.000 0.000 8.89437003 5.09131478 7.90152945 9.77235829 12.42844147 6.79397259 10.08818096 9.03212151 8.97908417 NA 11.85027859 12.15069117 3.24331872 -1.07856367 3.67627869 8.25678046 4.77937005 12.70633167 11.51174332 11.44372651 8.66117061 4.67627869 8.94098097 9.23313838 7.64248931 1.24330349 1.24330349 NA 11.02991463 5.44495192 4.41324203 7.99820566 7.15500944 10.68822137 10.17228073 4.56524377 9.97531606 3.92138872 5.47597980 11.28278571 8.47405918 5.33078067 -0.07856367 5.50635122 8.91291208 7.52501646 -1.07856367 NA 8.37466089 3.38082640 3.62182917 11.21945273 3.67627869 8.44691084 10.24500797 10.02598887 6.70929339 11.17700891 16.10455059 9.61835760 8.17168872 4.34765148 10.69164111 1.50634805 -1.07856367 -0.07856367 1.50634805 14.47273855 6.92701464 8.06094176 12.09178471 10.05067324 11.02106672 12.77108846 11.65270921 9.44004338 11.41474527 13.75180634 10.21140906 9.80784883 8.50070607 -0.07856367 9.47597899 11.70520695 10.482201 11.156507 6.460549 13.020982 9.096316 8.093818 8.595582 10.179367 10.036356 8.190517 7.456666 12.047611 8.000875 -1.078564 10.303474 9.830533 9.957426 7.927015 10.652285 10.428194 9.109979 8.931219 12.221886 8.236539 11.832872 9.614877 10.580940 9.470212 11.138439 9.677112 10.178778 10.906165 8.590275 6.614878 9.176112 7.666224 9.802504 8.272329 8.897238 4.206792 10.496457 11.012164 8.216011 13.046965 10.475979 10.745155 12.883292 9.495984 5.491247 1.921398 10.731962 9.992853 9.133278 TCGA-C8-A1HN 56 0 NA 394 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino 1 1 1 2 2 2 1 1 1 9 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 7 0 0 0 9.710324e-07 4.508365e-07 28.5714285714286 14.2857142857143 4.76190476190476 28.5714285714286 23.8095238095238 9.82464106 9.91691085 11.51402814 8.37002867 9.67575949 9.49450462 10.29505889 10.60273830 9.81748768 13.76786870 11.20940322 10.45708533 0.07765319 13.30366752 3.72155859 9.32682044 4.36310798 8.48497471 8.31849852 13.06683534 4.38149104 14.17898510 -1.92248353 9.27932248 11.80743394 7.78506595 1.07772154 8.54633116 11.46975602 -1.92248353 7.63037635 7.63037635 0.07765319 2.72156953 9.78937404 10.16218322 9.56303321 9.97252480 10.17343367 11.39554351 0.88502764 10.38405359 14.13523341 8.04216332 9.60860099 10.58475829 11.67284788 1.98458935 4.47002269 8.91927125 9.58599700 -0.92221011 10.21277493 3.16517232 6.27246370 4.91059836 10.18623151 12.15151385 10.26999975 10.52814503 12.89108738 7.85742620 11.21661874 10.53566750 11.25714961 10.74946915 4.50397199 12.19697237 10.67808458 NA 10.37834558 8.89868361 2.33018549 5.93568839 10.78312340 9.98347007 11.07770699 11.54658554 4.80562781 7.39511937 13.07581256 10.44757692 10.17079436 8.61103660 0.477520 0.472750 0.086638 0.422110 2.874600 0.051644 -0.013842 0.004831 2.119000 0.100130 1.635800 0.027330 -0.472280 -0.478620 0.027424 0.027424 -0.191140 3.656900 -0.484840 0.023324 0.515560 -0.425730 0.518700 0.955460 -0.378670 0.108740 0.799330 3.656900 -0.060392 0.463110 -0.004043 0.040856 0.504600 0.469610 -0.034249 -0.029064 -0.013842 -0.013842 0.029439 0.028173 0.381850 -1.069600 0.442370 -0.039148 -0.492060 0.162620 -0.472280 -0.392990 -0.447620 0.027424 0.032097 0.038885 -0.216790 0.015420 0.053921 -0.478940 -0.467080 -0.997860 -0.141190 -0.754880 -0.425730 0.041714 0.110790 -0.378670 0.108740 -0.978930 -0.306050 -0.423330 -0.401270 0.000 -0.445 -0.443 -0.443 0.000 0.000 -0.479 -0.470 -0.123 1.014 -0.423 0.083 0.509 -0.389 0.111 -0.270 0.109 0.463 0.463 0.000 1.583 -0.267 -0.422 0.000 0.000 0.000 0.000 0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.231 -1.008 1.261 0.000 0.000 0.000 0.000 0.000 -0.445 -0.443 -0.443 0.000 0.000 -0.479 -0.470 -0.123 1.014 -0.423 0.083 0.509 -0.389 0.111 -0.270 0.109 0.463 0.463 0.000 1.583 -0.267 -0.422 0.000 0.000 0.000 0.000 0.475 0.000 0.000 0.000 0.000 0.000 0.000 0.231 -1.008 1.261 0.000 0.000 0.000 0.000 8.56152281 -1.92248353 4.48710041 9.25450358 12.07744280 7.79449190 11.05104563 7.44302309 9.32528454 -1.92248353 11.95393614 11.04053796 3.50397199 0.07765319 1.66266126 8.16251520 3.93568604 9.71070210 11.76562939 11.20666795 10.18721126 0.66266126 8.74747804 9.52943329 4.58550341 4.43526187 2.24762376 NA 9.86275063 6.70706366 5.37232879 8.27737947 5.69975983 10.02715073 9.93879389 2.83258626 8.61006293 0.66266126 6.75366336 11.54582188 7.31611134 7.41086258 NA 7.04925066 9.26629580 -1.92248353 1.88506670 -0.92221011 3.93568604 5.20791627 -0.33733874 9.84091935 -0.33733874 5.76420813 10.23189220 10.11559708 3.77814548 9.51857625 11.62725102 7.92789408 2.83258626 3.20698698 12.11327937 4.22745614 NA 0.07765319 2.72156953 13.8717847 7.1384029 9.4581681 13.3036675 9.7403753 10.9534564 13.0668353 14.1617472 8.6841122 10.1777122 12.2425354 10.7242657 8.9192712 8.2798306 -0.3373387 8.6560798 13.5450578 10.1234667 10.8647933 6.7179519 13.4020613 9.8325945 4.0549874 8.9626407 9.8858667 10.5882289 6.3256347 8.5845105 11.2094032 6.8753685 0.6626613 9.2031204 8.6813333 8.5868585 9.0282628 9.5034473 10.1121621 8.8557842 8.9672110 9.9557579 3.3996360 11.5563591 9.5630332 10.2529446 10.1444690 11.0953854 8.6428091 11.0631932 9.9894734 8.8994811 5.2576179 9.1740136 6.7493184 9.5859970 2.5371469 10.2127749 6.2625816 11.0119507 10.1862315 7.0805223 13.4223150 10.6454254 10.8769886 11.4716337 9.7318955 0.3996633 -1.9224835 10.8794154 8.6332546 10.2102067 TCGA-C8-A1HO 34 0 NA 375 breast stage iiic t3 n3 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 1 2 5 2 1 1 1 1 1 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.774378e-07 31.8181818181818 18.1818181818182 0 27.2727272727273 22.7272727272727 10.9568567 10.2122590 12.2380046 9.4323989 8.6080374 8.4477742 10.9092898 9.9869878 9.0630040 14.2752431 8.7367013 11.0485802 -0.6968914 10.8593824 3.0580047 8.0795488 6.5792405 8.9415518 8.6683447 13.4820919 2.1104635 15.5903233 NA 9.1757908 11.7989709 10.4576176 1.3031086 7.1826992 9.3899157 0.3031086 7.8009678 6.3143431 NA 3.6954371 10.8056991 10.1204993 9.1080537 10.5643294 9.6830357 12.0192923 -1.6966576 11.3089159 13.7252135 8.6148640 11.2603994 11.1725170 10.5058519 5.1610976 7.0000834 9.0630040 10.7538117 -1.6966576 11.1365990 4.7625455 4.9469741 3.2099991 9.6991855 12.2470043 9.9044224 11.7083904 12.9414953 6.1979342 11.1214984 12.0280965 11.3343002 11.4320769 4.7293787 12.0515184 12.0087483 NA 10.1284723 9.9626658 3.7303900 4.5125682 10.5295281 10.4050916 10.9315615 11.1182990 2.8266807 8.9169053 10.9349750 9.9750992 10.5373346 9.0293342 0.00541390 0.00541390 0.00110930 0.00110930 0.48785000 0.01293400 0.72754000 -0.77769000 3.65690000 2.99640000 0.77041000 -0.00360110 -0.00926660 0.01530800 0.81630000 -0.76458000 0.04230700 2.08800000 0.04996600 0.01488800 -0.00332430 -0.78420000 -0.77150000 3.65690000 0.00000000 0.00000000 0.00000000 0.04443200 -0.00705760 0.00541390 -0.00636680 0.00110930 0.48785000 0.54683000 0.01293400 0.01293400 0.72754000 -0.77769000 -0.80527000 -0.00373950 -0.00373950 -0.84923000 -0.00995650 -0.00995650 -0.00995650 -0.00138580 -0.00926660 -0.02464100 0.03157700 -0.75002000 -0.81013000 -0.81013000 0.04230700 -0.73565000 -0.73565000 -0.75030000 0.01488800 0.01488800 -0.00332430 -0.00636680 -0.78420000 -0.77150000 -0.79336000 0.00000000 0.00000000 0.04443200 -0.00013862 0.00235810 0.00235810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.488 0.488 0.000 0.000 0.000 -0.748 0.000 0.000 -0.826 3.657 0.000 0.000 0.747 -0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.734 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.488 0.488 0.000 0.000 0.000 -0.748 0.000 0.000 -0.826 3.657 0.000 0.000 0.747 -0.531 8.3865954 1.8880711 4.3031159 10.1700084 12.4408275 7.1981759 10.3087405 8.6309493 8.8276577 0.3031086 11.8318142 11.3089895 3.4730465 2.5510484 3.0580047 8.1088600 3.2573124 12.1353137 11.8460268 10.5754541 9.6284213 1.8880711 8.6137287 9.8677417 5.7543263 0.3031086 -0.6968914 NA 8.8710720 6.0580025 5.2456288 6.9324723 5.5415210 10.2197419 10.6819526 -0.1118510 8.0428965 NA 6.7377435 12.6391342 7.7989707 6.8383909 NA 7.5415210 8.5307317 -0.6968914 4.8109109 NA 4.3475098 4.6098140 1.4730595 10.3665110 NA 6.2514824 11.3273899 9.2536719 3.9178232 8.4129466 14.3911588 6.9067427 2.6250366 3.0035483 12.2500222 8.5873616 -1.6966576 3.9469741 NA 13.9432261 5.9030286 9.4142516 10.8593824 10.8842671 9.8667889 13.4820919 13.5925585 8.3624602 10.8158564 12.3768391 11.4637752 9.0630040 7.6824939 0.3031086 9.6911332 11.3899156 11.4978727 11.6862802 7.1517391 13.2589007 9.2301530 4.5125682 9.4464992 8.1360057 10.7788518 4.3031159 9.5885181 8.7367013 7.0975318 0.6250834 11.2020951 4.4528656 9.1028751 9.0225049 9.7834012 10.8760529 8.7919602 9.5064639 12.1338292 5.1857595 11.8300821 9.1080537 11.5688774 9.1462517 10.8225065 8.0496302 10.5939987 10.9295094 8.6835768 6.9577521 8.3874991 6.2746586 10.7538117 6.0580025 11.1365990 6.7584431 11.2362533 9.6991855 7.7522642 13.7438229 10.7846631 9.5862042 11.3353339 9.7574152 NA 2.0035663 10.8239801 10.4139254 9.7999696 TCGA-C8-A26V 47 0 NA 616 breast stage iiia t3 n2 m0 female 2010 NA yes infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 3 2 1 2 4 1 1 8 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.838026e-06 6.242351e-07 11.2676056338028 53.5211267605634 4.22535211267606 14.0845070422535 16.9014084507042 10.0986001 10.1695057 11.8452042 9.7961741 8.5302456 9.9667415 9.9447399 9.1747969 9.5894175 12.7558625 10.5293763 10.2413424 -2.1668265 11.3315041 4.7521438 9.1869764 7.4699031 8.4662735 8.9830252 12.7145355 1.1552311 14.2923735 6.0906650 9.2363859 10.4222269 6.7250622 -0.1666646 9.6943650 11.5972167 -0.1666646 7.4238655 8.3859474 -1.1668265 3.6146392 9.9306519 10.7420460 9.7001706 11.4260855 10.5462350 11.4173011 1.5337128 10.3346178 14.7974723 7.9943597 9.9944036 11.0798703 11.4440723 3.9207411 -1.1668265 9.3931332 12.2212954 NA 10.9601439 4.4031314 5.6406325 4.4031314 9.7983409 11.7784476 10.3678242 11.4501715 13.0891550 9.0038290 11.3138159 10.6408383 11.5806320 11.0086718 5.0812075 13.5447300 11.0103861 -0.5818640 10.3878670 9.0536566 2.3018510 4.7757933 9.9776177 9.0421220 9.9020564 10.0707868 2.0032064 8.7013290 12.8033391 11.3112893 10.2330901 9.0584856 0.0165650 0.6871900 -0.7178200 0.6995100 -0.0297210 0.0000000 0.0026357 0.0533790 0.0143300 0.0143300 0.0143300 0.0154470 -0.7021700 0.0207630 0.0196680 0.0196680 -0.0473130 0.0122370 -0.7050500 0.0055529 0.0223040 0.0102850 -0.6936900 0.0135590 -0.0478010 -0.0478010 -0.0478010 0.0256710 0.0165650 0.0165650 -0.0091286 -0.7178200 -0.0791780 0.6215400 0.0000000 0.0000000 0.0026357 0.0533790 0.1055500 0.0125160 0.0125160 -0.0689450 -0.4039500 -0.4039500 -0.0069195 -0.0069195 -0.7059400 -0.7059400 -0.0023054 0.0196680 -0.0313590 -0.0313590 -0.0473130 0.0122370 0.0122370 -0.7050500 -0.7024400 0.0051359 0.0223040 -0.7096200 -0.7081800 -0.6936900 0.0086135 0.0148600 -0.0478010 0.0256710 -0.0274140 0.0338310 0.0338310 -0.702 -0.702 0.000 0.000 0.000 0.000 -0.705 0.000 0.000 0.000 0.000 -0.708 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.404 0.000 -0.143 -0.143 -0.702 -0.702 0.000 0.000 0.000 0.000 -0.705 0.000 0.000 0.000 0.000 -0.708 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.404 0.000 -0.143 -0.143 8.9385319 -2.1668265 6.4589873 9.7606857 10.9298286 7.3290931 10.9018885 8.3814547 8.6470594 -1.1668265 12.2184665 12.1551048 1.4182439 3.4479891 3.2595437 7.9792102 3.4479891 12.0288810 11.7779902 10.4248005 9.2164425 7.9167573 7.7341446 9.7536309 4.4331932 8.2875776 3.5057004 NA 11.3649032 2.5881569 8.5224026 9.0638990 8.7932801 10.7331070 10.0436451 2.0812033 8.4378315 5.3251309 6.8019450 12.0506300 7.7051831 6.7461676 NA -2.1668265 8.6550520 2.4771333 0.6406209 NA 4.0231045 5.8565899 0.4182439 10.7867471 NA 9.3221224 10.5867039 10.1181022 3.8105562 9.2532384 13.9254985 8.3916990 0.6406209 4.8667003 10.1720145 3.5881689 1.6406209 5.4331898 1.9207506 12.984549 6.772857 9.289119 11.331504 9.510557 11.653657 12.714536 11.375464 9.686588 10.968827 12.637308 8.540637 9.393133 9.363684 NA 7.420118 11.168250 11.0220215 12.0072675 7.4866782 14.0622830 9.3054612 4.2595437 8.6276940 8.1404791 9.8291300 6.1416167 7.1529500 10.5293763 8.2605907 6.6276944 11.4175360 5.4257346 6.9621487 12.3278213 10.5937902 11.1176685 6.4950555 8.3830627 12.5172596 4.1370608 11.6742940 9.7001706 9.8385518 10.1775740 11.3672161 9.7834694 10.7721226 11.0047677 9.7090274 0.8332544 9.6881893 8.9383617 12.2212954 3.6661658 10.9601439 8.1597074 10.5569391 9.7983409 7.9100934 13.0768214 10.9331190 11.1360599 12.7319740 10.5432236 -2.1668265 0.1552311 10.6380142 10.9515704 9.4064518 TCGA-C8-A26W 58 0 NA 381 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 4 1 5 3 4 4 1 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.24847e-06 4.508365e-07 12.2448979591837 40.8163265306122 6.12244897959184 16.3265306122449 24.4897959183673 10.3452531 9.4373203 11.0051933 8.8759103 7.9829474 9.0825890 9.1090074 10.1097343 9.2782859 13.0641417 11.5791086 10.4054056 1.4767446 14.2392250 3.0617071 8.6060220 6.6705104 8.3483364 12.4664884 12.6240713 0.1548424 13.9762861 7.7584371 9.5558558 10.9394459 7.1632401 2.3247242 9.2336290 10.6971175 0.1548424 7.6183356 7.9540928 -0.8452872 4.8827311 9.4963299 10.5977545 9.9258877 9.9557109 9.9101159 11.0496289 6.5428276 10.7884874 14.6033468 7.8791035 10.7411794 10.7072401 11.8753760 5.1090095 2.4027495 9.4896431 11.9542951 -1.8452872 10.6429023 5.0855479 6.9781785 5.2943634 11.0931042 12.0674198 10.1463329 11.6881408 12.3066204 7.8094472 11.0452653 10.4140777 11.7498354 10.5333768 3.9877029 11.9969650 11.2528432 2.5471290 10.5980137 9.2262735 4.0172627 6.2422748 10.6839975 10.2669247 9.3575472 10.0259462 4.9492268 8.9171930 12.4533749 12.4016259 9.6915439 10.1006207 0.0095883 -0.0074720 -0.6036100 0.5877500 0.5802300 0.0844980 0.0175440 0.0029133 -0.0918160 -0.6070900 0.2872300 0.0252500 3.4404000 0.0593660 3.6569000 -0.5940000 0.0095883 0.0037465 -0.0994910 0.0279190 -0.0694660 -0.6189200 3.3647000 -0.5922200 -0.0012473 -0.0393940 0.4722100 0.0161460 -0.6214000 0.0095883 -0.5384500 -0.6036100 0.0027745 -0.2459400 -0.5427000 -0.4897400 0.0175440 0.0029133 0.0147490 0.0137720 0.0282000 -0.6451800 -0.0047079 -0.0047079 -0.0047079 -0.0047079 -0.5941900 -0.1597500 0.0593660 -0.1212100 -0.5940000 -0.6155800 0.0095883 0.0037465 0.0037465 -0.0902290 0.0279190 0.0110570 -0.0694660 -0.6096000 -0.6189200 -0.5888200 -0.0167040 0.0023466 -0.0393940 0.0111210 -1.2214000 0.0237060 0.0277780 -0.594 -0.594 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.148 -0.454 -0.592 -0.592 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.580 0.000 0.000 0.000 -0.028 0.576 0.000 0.000 -0.502 -0.502 0.000 0.000 0.000 0.000 -0.610 -0.442 0.000 0.000 -0.119 -0.119 -0.594 -0.594 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.148 -0.454 -0.592 -0.592 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.580 0.000 0.000 0.000 -0.028 0.576 0.000 0.000 -0.502 -0.502 0.000 0.000 0.000 0.000 -0.610 -0.442 0.000 0.000 -0.119 -0.119 8.8360494 NA 5.5894399 9.8219225 10.5090604 6.6631994 10.5004936 8.7902028 9.0566510 1.7397617 12.1060047 11.2409407 3.6142387 1.4767446 4.3642643 7.6685390 6.3045585 11.3322306 11.7250225 10.6864362 9.6018943 3.1090095 8.6705107 10.1771788 7.1854781 5.0496308 3.4027358 NA 10.8799642 6.0065606 7.7510010 7.3569352 5.8759103 11.1742836 9.9439371 5.2100927 8.8979625 NA 6.8165895 12.1361107 8.7731966 7.5705525 -0.8452872 1.3247530 8.0374542 1.3247530 4.2422748 2.1548100 6.9328880 6.6795491 4.1320915 10.5530203 -1.8452872 7.9924388 10.5679101 10.1656888 5.3642643 10.2705050 12.7452812 8.7265635 4.5977516 4.9621649 10.6295310 2.4027495 -1.8452872 1.3247530 1.4767446 15.449784 6.622416 9.127791 14.239225 10.468828 10.405702 12.624071 11.418227 8.555018 10.444542 12.737953 9.623435 9.489643 9.644157 3.154810 7.146332 11.023441 11.339067 12.506855 6.892903 13.839119 9.300743 7.132091 9.316573 8.698810 10.844534 7.853516 8.185478 11.579109 8.048112 1.324753 10.808104 5.638627 8.430598 9.690572 10.386332 11.068261 6.339686 9.221573 10.227948 7.223590 12.576773 9.925888 10.831870 9.984930 11.026139 9.543367 11.163590 10.624961 8.200571 3.678376 9.221116 7.431145 11.954295 7.447133 10.642902 6.630544 10.793842 11.093104 7.688355 13.801679 10.000301 10.244593 12.142164 11.347720 3.547129 2.324724 10.582386 10.022476 9.564732 TCGA-C8-A26X 58 0 NA 376 breast stage iia t1 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 1 3 5 1 2 6 4 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.075072e-06 2.080784e-07 18.9189189189189 18.9189189189189 2.7027027027027 37.8378378378378 21.6216216216216 9.4235885 8.8635005 11.1505799 8.4226232 8.2175085 9.8769540 9.1791547 10.0937981 11.3972948 13.5666191 10.3221559 10.3544048 0.4625759 13.7176989 8.2785382 10.6317109 5.5215156 8.9124577 5.4322479 12.0939497 0.4625759 10.0223169 1.8776657 9.3765079 11.9619687 8.6392097 2.1995938 10.7464812 11.5817784 -1.1224913 8.8620769 7.4360794 -0.1223343 8.1421014 9.4905270 10.1415147 9.2319080 9.9644583 9.9604729 10.5269148 0.4625759 10.0889386 14.9274646 6.2890008 8.9069459 10.9230770 10.2991975 4.1255850 5.2526995 11.9031442 12.1909668 NA 11.3200838 5.4322479 7.8520731 6.8832836 9.8937704 11.8820547 9.9704157 11.7732339 12.5273639 6.4849888 10.4206904 9.8923765 11.1055753 10.6454292 4.3370902 10.5667830 9.2241722 -0.1223343 10.3355525 9.3933585 1.0476082 6.0069420 10.6986353 9.6013195 9.1279569 9.5509676 3.5215156 9.4168174 13.0415441 12.8852991 9.2352106 9.1208325 0.2813700 0.2813700 0.0994330 0.0820430 -0.1097200 -0.2834600 -0.1105100 -0.3226300 -0.3096800 0.1000200 0.3398200 0.2850100 -0.1014000 -0.2662500 0.0000000 0.0000000 0.0840650 0.0840650 -0.2934300 -0.2341000 0.2873900 -0.3380200 1.0295000 0.4561500 0.0688080 -0.4786900 -0.2128000 -0.0737430 -0.1010500 -0.5167100 0.1049700 0.0994330 -0.0971000 -0.1031600 -0.3035700 -0.3035700 -0.1105100 -0.3226300 0.3028200 0.4975300 -0.1043400 -0.3096800 -0.0989450 0.0016642 -0.3088600 -0.3088600 -0.1014000 -0.0730760 -0.2710600 0.0000000 -0.3069100 -0.1493900 0.0840650 0.0840650 0.0966700 -0.2934300 0.1064300 0.1064300 0.2596500 -0.3056900 -0.3060400 -0.3208900 -0.2850100 0.0672320 -0.2128000 -0.0737430 0.0795910 0.0994330 0.0994330 0.184 -0.101 -0.304 -0.304 0.000 0.000 -0.293 0.000 0.260 -0.181 -0.293 -0.306 -0.306 -0.285 -0.285 0.000 -0.213 -0.107 0.174 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.304 -0.304 0.303 0.303 0.476 0.476 0.172 0.482 0.000 -0.309 0.000 0.000 0.184 -0.101 -0.304 -0.304 0.000 0.000 -0.293 0.000 0.260 -0.181 -0.293 -0.306 -0.306 -0.285 -0.285 0.000 -0.213 -0.107 0.174 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.304 -0.304 0.303 0.303 0.476 0.476 0.172 0.482 0.000 -0.309 0.000 0.000 9.0773309 6.3452633 7.0525844 10.4644984 12.9207713 6.4363084 11.7346676 9.7425644 8.6606566 1.4626282 14.4345238 11.9013870 2.0475733 0.8776657 3.0475907 7.2828002 8.0650105 12.2071747 11.5817784 10.4250351 9.3143700 2.3370831 8.0525844 10.1040708 8.8216385 11.2202889 5.1255850 NA 10.9079808 4.6590169 6.8832836 9.1315061 6.0375294 9.4678058 9.5919041 4.1995860 8.8245648 NA 7.3654983 12.7500449 7.2263871 13.4582705 -0.1223343 7.3288697 8.5588971 4.2352139 4.2699757 6.2613634 7.1676771 4.0871149 3.1255850 12.4808213 NA 9.6581984 10.6954417 10.1326871 6.5358694 10.3849577 13.7590116 9.9464368 4.3370902 5.3206038 9.5553783 3.5215156 0.4625759 4.7603008 5.5215156 11.488222 6.353392 9.408065 13.717699 10.037530 11.359962 12.093950 8.906946 8.917948 10.256495 13.008792 10.094404 11.903144 10.652034 1.684998 8.050086 11.272121 10.4206904 12.2690364 6.8142966 12.9439152 9.3725142 7.2308054 7.8606519 7.8635005 8.8941047 7.5815622 7.2439803 10.3221559 8.9756907 2.8776657 10.2843951 4.5500818 8.1467850 10.6946422 10.4226230 11.0494609 8.8577982 8.4109885 8.5987579 10.3012998 11.4414030 9.2319080 10.8179722 10.0431937 10.7371934 9.8797704 9.5197104 9.9349735 7.7664017 6.3452633 9.1902126 8.5349055 12.1909668 10.5120159 11.3200838 6.9809461 11.4317677 9.8937704 7.1814395 14.0350415 10.7053983 10.6573779 12.2963018 10.9991921 4.4012209 0.8776657 9.0184884 10.2780044 8.6157510 TCGA-C8-A26Y 90 0 NA 394 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 3 4 5 1 2 6 4 9 6 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.706243e-05 5.16728e-06 6.11620795107034 74.3119266055046 1.68195718654434 7.64525993883792 10.2446483180428 10.545809 9.121887 11.764697 9.661514 8.959370 10.777201 11.000671 10.422585 11.068010 13.467934 10.435711 10.409988 4.558157 12.178973 4.357461 9.492270 6.838266 8.275790 10.088222 13.034838 2.098723 10.491657 7.124261 9.630108 10.037466 9.860278 2.378845 9.166353 11.611890 2.814940 8.127422 7.620046 NA 3.576776 10.173632 9.740004 9.701823 9.864545 9.249924 10.965343 5.357461 7.478724 14.463428 8.349052 8.852659 10.736645 11.239191 6.998730 3.539295 9.039564 12.479883 -1.708396 9.609914 3.648926 7.405113 4.830529 8.161736 11.861820 10.265786 11.668175 12.947908 8.604254 10.247384 9.506297 11.672238 10.920500 5.046260 12.935622 7.468791 2.198274 11.014392 9.060383 3.127303 3.461293 11.210980 11.005831 10.203886 9.267935 2.935233 5.005616 13.038620 11.894998 10.271154 9.208743 0.8180600 -0.0633010 0.0162860 0.7337900 0.3833700 -0.0552290 0.0000000 -0.3553300 0.0062481 0.0062481 0.0413170 0.0234270 -0.3536200 -0.3468700 -0.3468700 -0.3468700 -0.4066100 -0.3339900 0.6077400 -0.3260000 -0.3687300 -0.3507600 0.0301690 0.0301690 -0.3273700 0.2113100 0.0168450 0.7684900 0.0579390 0.0224440 0.3145000 0.7117000 0.3626400 -0.4294200 -0.0638380 -0.2172600 0.0000000 -0.3553300 -0.3553300 -0.3849300 0.2155700 -0.0216470 -0.3445800 -0.3382500 0.2216000 0.2753700 0.0088920 -0.4053900 -0.3469800 -0.3468700 -0.3468700 -0.3468700 -0.4066100 -0.3397500 -0.3506500 -0.2070900 -0.3409000 0.0192210 -0.3635200 -0.3499600 -0.3507600 0.0301690 -0.6371900 -0.3120200 -0.3324800 0.0225850 0.3603500 0.0211830 -0.7554700 -0.354 -0.354 -0.347 -0.347 -0.334 -0.334 -0.207 -0.335 -0.349 0.364 0.014 -0.351 0.000 -0.206 -0.603 -0.327 -0.327 0.000 0.000 0.000 0.000 0.360 0.000 0.621 0.621 0.000 0.000 -0.211 -0.356 0.000 0.000 0.000 -0.355 0.266 0.266 0.000 0.000 -0.338 0.323 0.000 0.000 -0.354 -0.354 -0.347 -0.347 -0.334 -0.334 -0.207 -0.335 -0.349 0.364 0.014 -0.351 0.000 -0.206 -0.603 -0.327 -0.327 0.000 0.000 0.000 0.000 0.360 0.000 0.621 0.621 0.000 0.000 -0.211 -0.356 0.000 0.000 0.000 -0.355 0.266 0.266 0.000 0.000 -0.338 0.323 0.000 0.000 8.6783114 -0.1235911 8.9486896 10.1982618 12.3156453 7.1924497 12.2741867 7.8152667 9.1089546 NA 12.3072219 12.9482240 4.3788376 -0.1235911 2.6132959 7.2913715 5.6401003 11.3997324 11.7759425 11.2252464 9.2050088 3.0987227 9.7420670 10.4759368 6.1431199 6.0922709 8.6144261 NA 10.5865662 7.6110432 5.0328370 7.6065207 8.7353509 10.4246034 10.4848967 1.2913678 8.9567072 1.2913678 9.0412408 12.0377806 9.4848966 9.0874109 -1.7083964 7.3788341 7.6489234 6.1115509 2.3788445 -0.1235911 4.7832261 5.4456837 1.7508209 10.6962468 0.2913678 11.3304617 11.1372534 9.5327586 5.1115489 11.2874917 12.9819696 7.5928674 3.8459617 4.2455641 8.7882250 3.0987227 -0.1235911 5.0857858 5.1242620 9.1734410 9.1655841 9.4768663 12.1789727 11.6221229 11.2337025 13.0348383 8.6389926 8.1586501 9.7630465 13.1863311 6.8949972 9.0395642 7.7446421 -0.1235911 7.8188480 12.2105139 11.373687 13.114539 5.420654 13.205054 9.960256 5.098727 8.616677 9.613863 10.265571 6.092271 7.534545 10.435711 9.771152 5.700762 10.570692 7.711332 8.952927 11.023115 11.829196 11.158071 8.963797 9.990076 9.506297 5.410314 11.933381 9.701823 10.067804 9.645070 10.900088 9.247021 7.746698 11.206130 7.962028 2.539308 9.177045 5.782021 12.479883 6.644518 9.609914 5.648923 10.726260 8.161736 7.322038 12.337216 10.771152 10.604254 13.408081 9.862176 5.920727 5.666410 10.146240 9.913423 10.453448 TCGA-C8-A26Z NA 0 NA 470 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 1 1 2 2 1 1 1 8 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.075072e-06 1.387189e-07 33.3333333333333 13.8888888888889 0 30.5555555555556 22.2222222222222 10.1232213 10.1531268 12.2963281 9.6577238 9.4881999 8.3145098 10.2439338 10.3911544 8.4267470 15.3622314 10.7454068 11.5267848 -1.7393721 13.5002197 4.5085111 7.9662165 5.6868479 8.4785415 7.3691087 13.5575001 -0.1544096 13.6177235 0.8455101 9.1897756 11.8182869 8.8455465 1.2605677 8.4052423 10.0366057 2.2605978 7.0054180 6.7363167 NA 3.3898696 10.3506964 10.1768366 9.5126579 10.4417362 10.6098651 11.9273627 1.5825078 11.9722509 14.0522556 9.7050759 9.9321250 11.2003467 11.6735506 4.4504063 7.4602560 9.1689764 10.5375807 NA 11.2864156 4.7997453 4.0154708 4.7841480 10.8057897 12.0390718 10.1519879 11.9137649 12.4088221 8.6625299 10.0345473 9.6045857 11.1230276 11.2453584 5.3795239 11.8287776 12.2832985 -1.7393721 10.2735575 9.2995029 3.0240005 3.8752984 10.0488944 10.3619031 10.6897291 10.3697616 1.2605677 7.7841460 11.9722509 9.8166109 10.3596029 9.2549374 0.9905600 1.0199000 -0.0083783 0.0000000 0.0070826 -0.0019399 -0.0310860 -1.0490000 1.1340000 1.1340000 0.6320700 0.4987400 -0.0263110 1.0228000 2.8511000 -0.5429000 0.4354700 0.4771800 0.0019418 -0.0256220 0.4193200 -0.5476400 0.4668700 0.4668700 -0.5842200 0.9039200 0.9039200 0.4980500 -0.0757450 -0.5281800 -0.5372600 -0.0034253 0.0070826 0.0130740 -0.0167040 -0.0060904 -0.0365380 -1.0490000 -1.1404000 -0.6256000 0.5126300 0.0908650 0.5016800 0.4285600 -0.5618600 0.5039400 -0.0263110 -0.0116110 0.7960700 -0.7937700 -0.5429000 -0.5686300 -0.0291750 0.4771800 0.4771800 0.0019418 -0.0256220 -0.0256220 0.4064300 -0.0887720 -0.6047700 0.4668700 -1.0690000 -0.6180600 0.9039200 -0.2220700 -0.0204120 0.4505400 0.4902700 0.000 0.000 0.000 -0.475 0.477 0.477 0.000 0.000 0.406 0.440 0.440 -0.605 0.467 -0.993 -0.993 -0.590 0.314 -0.528 0.462 0.214 0.415 0.000 -0.153 0.000 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.000 0.541 0.429 -0.133 0.000 0.000 0.000 0.000 0.000 -0.475 0.477 0.477 0.000 0.000 0.406 0.440 0.440 -0.605 0.467 -0.993 -0.993 -0.590 0.314 -0.528 0.462 0.214 0.415 0.000 -0.153 0.000 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.000 0.541 0.429 -0.133 0.000 0.000 8.7782533 NA 4.5825139 9.8903959 11.5615084 6.7348573 11.3483782 8.1401825 9.8799694 1.7200157 11.1540751 11.5864402 3.6528995 2.3480341 4.4103343 8.0204722 4.0934757 9.0146362 12.9717669 10.8944873 9.8935791 3.2605827 8.3821173 10.5606504 5.2940068 2.3480341 1.8455503 -1.7393721 10.6939086 6.6486006 6.4103309 7.7220636 5.1432261 10.5630743 10.5217974 1.7200157 9.1546437 NA 6.4942044 11.6522303 8.9927514 6.9782609 -0.7393721 7.5413545 9.3526804 5.6442889 4.4305061 -0.7393721 2.9044456 6.4459054 0.5825560 10.4270608 -1.7393721 9.7865941 10.6386078 10.3124725 3.4700422 8.2732086 11.0497099 7.1883623 2.3480341 2.4304994 9.7900145 1.0679140 NA 2.1674864 2.4304994 14.895510 5.822827 8.700415 13.500220 10.322630 10.710506 13.557500 13.218955 8.391155 10.964920 13.061838 10.164842 9.168976 8.563223 1.430499 7.974829 12.867799 10.7403642 12.2766087 7.8417845 12.7948856 8.8132531 4.4504063 9.2780884 9.0411236 10.7645810 4.7200157 9.4273747 10.7454068 7.1853968 0.5825560 10.7816935 4.3266740 8.0467393 10.2839918 9.5694917 11.4375362 8.6657253 9.0129644 10.8358868 4.9330107 12.8407600 9.5126579 10.0558118 9.2125971 10.2549373 9.6153843 10.5105862 10.2524600 9.2619922 -0.7393721 8.6038029 6.4490248 10.5375807 5.0287680 11.2864156 7.7342896 10.9391840 10.8057897 7.4330112 12.7198484 10.4020524 9.9957168 12.8052465 9.8045823 1.0679140 0.9808296 10.1142833 10.4648494 9.9285825 TCGA-C8-A273 NA 0 NA 513 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma 2 asian not hispanic or latino NA NA 1 1 1 2 1 1 1 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.733986e-07 41.1764705882353 17.6470588235294 0 41.1764705882353 0 9.7618213 9.5141071 12.1263937 8.8643431 8.1729545 8.7202877 10.3674309 10.1107887 10.6187262 14.6995728 10.5697331 10.8057427 1.5523771 11.8108162 2.4783765 9.4508182 5.9239264 8.0585763 10.9444706 12.4775514 3.0377863 14.8526633 1.9308887 10.0514244 11.1369547 8.6929422 1.0378039 8.1038842 10.2727831 0.8154115 7.4078592 7.3125889 -1.7695510 4.7222911 9.7182799 10.2655826 10.0790627 10.0272906 8.9291445 11.1509788 NA 10.7382345 15.1566084 7.1429403 10.5024864 11.6326525 10.2758582 2.6898806 3.2304336 9.0593696 11.6008548 NA 11.0027544 4.3801892 5.2857240 4.4003671 10.6122531 11.6431420 10.6073791 11.6658497 12.4232720 9.0649109 10.0996480 9.6495152 11.1602530 10.9957259 3.8451488 11.6538184 8.8396186 -1.7695510 10.6073791 8.8125817 1.9330816 5.0759305 10.8114050 10.0934646 9.8997678 9.5669464 1.5523771 8.6556556 12.7786597 10.3019022 9.7749213 9.4890058 0.6634600 0.6640100 0.0195030 0.0278590 0.0210430 -0.0128510 0.0000000 -0.7002800 0.6041300 -0.0063668 0.6128100 -0.0037395 -0.0055579 0.0091705 -0.0057139 -0.0057139 -0.0008316 -0.0008316 0.0080567 0.6382800 -0.0179410 -0.0404800 -0.7281800 3.6569000 -0.0877120 -0.0877120 2.4315000 3.4088000 -0.0096806 -0.0096806 0.0133530 -0.6960400 0.0104240 0.0078702 0.0148880 0.0148880 0.0000000 -0.6991100 -0.7002800 0.6242400 0.6177000 -0.6357600 -0.6831400 -0.6831400 -0.0213730 -0.0213730 -0.0055579 -0.0055579 0.0091705 -0.0057139 -0.0057139 -0.0057139 -0.0008316 -0.0008316 -0.0008316 0.0016642 0.0040243 -0.0099565 -0.0179410 -0.0235660 -0.0404800 -0.7281800 -0.6984800 -0.1009700 -0.0877120 -0.0145030 0.0069435 -0.0533410 -0.0533410 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.680 -0.680 0.000 0.000 0.000 0.663 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.700 0.619 0.619 0.604 0.604 -0.662 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.680 -0.680 0.000 0.000 0.000 0.663 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.700 0.619 0.619 0.604 0.604 -0.662 0.000 0.000 0.000 8.4066128 NA 4.6054766 10.5039441 13.1711205 7.5839395 10.6305187 8.2096079 8.9046409 0.8154115 11.6594542 11.6845977 2.8154115 -1.7695510 2.7540109 8.1991064 5.5879920 9.9723281 11.8733940 11.0089277 9.4477918 -0.7695510 7.6608923 10.0798449 5.0506192 2.2304490 0.8154115 NA 10.3581118 5.8303517 6.6898708 8.6184571 7.4325636 9.8931082 10.0191581 2.8154115 9.7152628 -1.7695510 6.3125889 12.2101329 7.3852576 6.9819839 -0.7695510 7.2965290 7.9583601 0.5523771 4.1846374 -1.7695510 3.7540002 5.0659858 1.4003740 11.0163009 3.7222911 8.1237412 10.5470042 9.8520338 4.8451488 8.4995665 12.3667902 7.4423281 2.1373396 3.0377863 11.0327542 0.2304490 NA 2.9308887 4.6567023 13.934995 6.815403 8.815402 11.810816 9.832211 10.552368 12.477551 12.495762 8.924798 10.132815 13.297118 9.484878 9.059370 8.472423 1.230449 9.415315 13.030329 10.883733 12.776611 6.807869 13.222624 9.111554 4.400367 7.563595 8.042617 10.503664 5.631320 9.881940 10.569733 6.506564 2.230449 10.884404 3.689869 9.292587 10.510050 10.162655 10.809991 9.137330 9.983657 11.428117 4.800294 11.484583 10.079063 10.325507 10.129041 10.709715 9.770568 10.427657 10.684225 9.400365 NA 9.295715 7.106957 11.600855 5.525060 11.002754 6.400365 10.657415 10.612253 7.525360 13.340026 10.546721 10.272783 11.452480 10.430725 -0.769551 -0.769551 10.082579 10.087254 9.308591 TCGA-C8-A274 63 0 NA 508 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 2 2 4 3 2 2 3 3 1 2 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.369646e-06 1.629947e-06 9.55056179775281 66.2921348314607 1.68539325842697 12.9213483146067 9.55056179775281 9.9102618 10.0639227 11.7009931 9.8771238 8.2266222 10.0530710 10.1486198 9.7860497 9.2186073 9.4288932 10.5055543 10.7011130 1.1458079 13.0058248 2.9531535 9.7175575 6.1956527 8.2319411 11.6072843 13.2694817 1.9531535 13.5090841 7.8617668 9.3996050 10.9822497 2.2332745 -1.8541269 9.1967895 10.1757822 0.4676968 7.6336448 7.0616844 -0.8541269 3.5381284 10.3439428 10.4524362 10.0901508 12.0566349 11.1458048 11.5324757 0.1457427 11.2637725 13.9889898 7.9863154 9.4461402 11.6432825 11.7143548 4.9271664 6.8358028 8.0780195 11.9188410 NA 11.1579055 3.4677360 5.1344879 3.7896562 10.1956533 12.3997262 10.4441538 11.4458713 13.3628537 9.2139113 10.6134104 10.1105970 11.7756168 10.7982017 5.4945340 12.1124905 10.6835086 -1.8541269 10.2942814 8.9523545 3.5449799 5.3842087 10.8914791 9.7910129 9.7572908 9.7142361 0.1457427 10.2760537 13.5828416 11.7866146 10.5954693 9.0284479 1.75600000 1.81660000 -0.49538000 0.00235810 0.00444110 0.00000000 -0.42615000 -0.00152430 -0.00360110 -0.00360110 -0.00498440 0.48544000 0.48992000 0.00805670 -0.00069303 -0.00069303 -0.51187000 0.01167900 -0.49193000 0.00249690 -0.06678800 0.00194180 0.00194180 0.00194180 -0.02931100 0.41814000 0.43885000 0.49575000 -0.50872000 -0.49527000 0.04288600 -0.49538000 0.00444110 0.00444110 0.00000000 0.00000000 -0.42615000 -0.00152430 -0.00152430 0.66180000 -0.01050800 -0.00360110 0.00499690 0.00499690 0.00499690 0.00499690 0.48992000 0.48992000 0.00805670 -0.00069303 -0.00069303 -0.00207840 -0.45179000 0.01167900 0.00209200 -0.49193000 0.00277450 0.00277450 -0.49183000 -0.49600000 0.00194180 0.00194180 -0.48176000 -0.02931100 0.43885000 -0.01945200 0.01349200 -0.49611000 -0.49611000 0.490 0.490 0.000 0.000 0.000 0.000 -0.492 0.000 0.000 0.473 -0.023 0.000 0.000 -0.482 -0.482 0.000 0.439 1.261 1.756 0.496 0.496 0.000 -0.496 0.394 0.394 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 -0.495 0.000 0.000 0.000 0.000 0.000 -0.103 0.106 0.490 0.490 0.000 0.000 0.000 0.000 -0.492 0.000 0.000 0.473 -0.023 0.000 0.000 -0.482 -0.482 0.000 0.439 1.261 1.756 0.496 0.496 0.000 -0.496 0.394 0.394 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 -0.495 0.000 0.000 0.000 0.000 0.000 -0.103 0.106 8.5594329 7.1401580 7.2172676 10.8914791 11.5055544 7.7496167 11.4613790 7.3782740 8.7914631 NA 11.6628590 10.7539510 1.7307486 2.7896667 4.0284454 9.0609372 3.8737246 9.2037965 11.0685750 11.5462840 9.3119678 1.7307486 8.4335170 10.1976935 5.1570316 3.1902040 2.6052336 NA 10.9649860 6.3405623 5.5033583 8.2425201 11.1012731 9.9746713 11.4424343 3.2332745 8.5668178 NA 8.0481800 12.1343120 9.1867793 6.3889782 NA 7.6926992 8.9230600 3.1902040 1.7307486 0.1457427 2.8462526 6.3183819 0.1457427 10.6103506 2.4677229 5.1902000 10.1493228 9.9197682 4.4312084 10.1298672 12.7666547 7.1847236 2.2332745 2.9531535 11.2451526 3.0526941 -0.8541269 2.9531535 0.7307486 12.273477 6.421928 8.462086 13.005825 9.822643 11.838202 13.269482 12.237571 9.204473 10.219277 13.446837 8.544548 8.078019 10.082443 1.467749 6.978694 12.563921 11.243179 12.101364 8.496744 13.838011 8.768772 3.572065 9.436400 8.904861 10.646654 5.965983 7.485655 10.505554 3.789656 3.355256 11.194973 9.197014 8.136022 9.440425 10.666914 11.200918 7.426576 7.599075 12.732879 2.846253 12.042525 10.090151 10.239883 9.886850 11.626974 8.738262 10.334703 10.863053 9.542945 10.184038 9.549041 5.190200 11.918841 1.846233 11.157906 7.264746 10.310397 10.195653 7.325714 13.445728 9.857902 10.474199 12.901579 10.895884 -1.854127 1.273456 10.280552 10.771742 9.934931 TCGA-C8-A275 56 0 NA 1 breast stage iia t1 n1 m0 female 2010 NA NA infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 3 2 1 1 2 6 1 2 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.843738e-06 1.040392e-06 7.82608695652174 66.9565217391304 1.73913043478261 13.9130434782609 9.56521739130435 10.1597021 9.8944396 11.8539633 9.3570705 7.9090818 9.3596571 9.9266331 10.7461481 10.6493106 13.7274939 11.2001328 11.0152244 2.2348998 17.4707730 2.4048214 9.0276799 5.5295118 8.6314943 5.4048146 12.8717408 NA 12.5940901 3.2348845 8.7522639 11.5635646 9.6394990 4.1656306 9.9559888 11.7132801 0.5567972 8.3551273 7.2461173 0.2348692 5.8642456 9.6464007 10.5599139 10.0203420 11.3432507 9.7803368 11.3185352 1.8198725 10.1938048 14.4898260 7.0562486 8.6336332 11.7291202 10.4848919 3.3223464 2.0422591 9.0374061 11.5044547 0.2348692 11.0158394 5.5110125 7.4321067 5.9422494 8.9196383 12.0331589 9.8578566 11.4735929 12.7700435 5.7584524 10.4290309 9.5415210 11.3694764 11.5780753 4.8348022 12.6292853 10.3355519 NA 9.8899731 9.7065649 2.0473988 6.2235751 10.6996906 10.6713410 9.3564231 10.4732944 2.6272099 9.8080634 13.0032808 11.6894460 9.6861008 9.1190602 0.44037000 -0.01464100 0.04329900 0.04329900 0.00597000 -0.00069303 -0.00650500 -0.00138580 -0.00719580 -0.00719580 1.75520000 0.00000000 0.00000000 -0.00851760 -0.00851760 -0.00851760 -0.00387790 -0.00387790 0.68347000 0.00319100 0.00527490 -0.01931400 3.65690000 2.60760000 -0.07361000 -0.48386000 0.29660000 -0.01257600 -0.02753500 -0.01009400 0.00499690 0.04329900 -0.48208000 0.00597000 -0.00069303 -0.00069303 -0.00650500 -0.48008000 -0.01020000 -0.00664320 -0.01477800 -0.00719580 0.00110930 -0.00581400 0.45105000 0.45105000 0.00000000 0.00000000 -0.00851760 -0.00851760 -0.00672830 -0.00470790 -0.00387790 -0.46547000 -0.01023200 0.24218000 0.00319100 0.00319100 0.00513590 0.00110930 -0.01931400 -0.50370000 -0.47162000 -0.07361000 1.50550000 -0.01257600 -0.00180140 -0.02436500 -0.01876500 0.000 0.000 0.000 0.000 0.000 0.000 0.662 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.472 0.797 0.797 0.000 0.439 0.000 0.000 0.442 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.700 0.000 0.450 0.181 0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.662 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.472 0.797 0.797 0.000 0.439 0.000 0.000 0.442 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.700 0.000 0.450 0.181 0.181 8.5758523 4.1175288 5.4732934 9.0406336 12.9940496 6.1524410 10.4828171 8.9294303 9.7783952 1.6943008 12.7882189 11.1946851 0.2348692 -0.7651308 1.4047942 8.4048146 5.3329227 11.1283808 11.4631071 10.5838944 9.0341711 2.3223608 8.2888153 9.7116358 7.6055773 3.7584524 2.3223608 -1.7651308 11.3157072 5.0803805 7.1890862 8.1671045 8.5191354 10.0405086 10.3483062 4.5202902 8.9482761 NA 8.3590111 12.5173265 7.3512334 6.6736808 NA 5.8931001 7.3486317 -0.1801683 3.3223464 NA 7.2093042 2.4941596 3.1890813 11.0652068 2.1417924 7.1685799 10.4038750 10.6684751 5.9695995 10.1205860 13.8206444 9.4290309 4.7106246 4.3846370 9.2306567 1.6943008 NA 2.1417924 0.5567972 9.977199 7.092870 8.539811 17.470773 10.736976 10.331605 12.871741 9.209304 9.045461 10.896890 13.319449 8.813262 9.037406 9.131979 -1.765131 8.883247 11.609929 11.501237 12.686294 5.758452 13.214538 8.656954 7.746642 9.207152 8.570280 11.134551 7.572512 8.268313 11.200133 8.875135 1.694301 10.637102 6.983083 8.800201 12.239812 11.269861 10.356747 7.268313 9.750097 10.118297 8.291527 11.281142 10.020342 10.380185 9.717194 11.310536 10.045060 9.012967 10.969599 9.025238 -1.765131 9.527470 8.226412 11.504455 8.535242 11.015839 6.979724 11.527355 8.919638 7.902001 13.476240 10.804983 10.646930 12.199321 11.699691 5.492276 2.042259 10.269345 9.854193 9.881898 TCGA-C8-A278 61 0 NA 297 breast stage iiia t2 n2 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 4 3 1 1 2 6 2 5 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.935946e-07 1.387189e-07 29.1666666666667 16.6666666666667 0 25 29.1666666666667 10.011656924 9.618584639 11.109055046 9.142517848 8.752425139 10.277242875 9.344778353 10.231327038 9.840802938 13.226884062 9.505747455 10.329213538 2.732269200 15.985269040 3.802668866 8.692280374 5.560097398 8.983997410 9.325482886 12.558509133 -1.589441802 12.017102541 1.995303605 9.509698217 10.658277902 4.191712660 -0.004624027 12.171797692 12.104817074 0.732312621 7.904205889 7.991550756 NA 7.484491832 9.278401135 10.738183650 9.304410192 10.494494316 10.214884794 10.969966433 9.885577110 10.385123396 14.160978841 7.321322938 9.020452474 10.939536829 10.320243441 3.658280045 3.165236648 8.986834693 12.056571539 0.410341105 11.073018722 5.068563335 7.817618142 5.476440016 10.402934666 11.935871156 9.848622471 12.172940018 12.782467213 6.497813524 10.716696874 9.807190516 10.998362232 10.764324175 3.539630325 11.948660559 8.235309181 NA 10.039706908 9.982576815 2.322995294 6.487166351 11.093783639 10.159800840 9.863106351 10.224131583 2.497816717 10.067668830 12.634125834 12.514375701 9.033317273 8.797290592 0.0000000 -0.1671400 0.2283900 0.2667100 -0.2675700 -0.1380700 0.0179630 0.4355800 -0.4065000 0.4324300 0.5788000 0.0284810 0.0308730 -0.2039800 0.1580100 0.1580100 -0.1023600 0.1241700 -0.2098300 -0.0346310 -0.1398700 -0.3471000 3.6569000 0.9473100 0.0144700 -0.1514400 -0.1514400 0.2649800 -0.1593700 0.0000000 0.0072217 -0.0083005 -0.2675700 -0.2675700 -0.1380700 -0.1380700 0.0179630 0.0179630 0.0036076 0.0290440 0.0290440 -0.4104700 0.0254110 0.0254110 0.0254110 0.0738330 0.0308730 0.0308730 -0.2039800 0.1580100 0.1580100 0.1580100 -0.1023600 0.1241700 -0.3128400 -0.2148600 -0.0346310 -0.1471300 -0.1398700 -0.3441200 -0.3471000 -0.3421700 -0.2336100 0.0097276 -0.1514400 0.2649800 0.2265300 -0.0219210 -0.0219210 0.000 0.000 -0.204 -0.046 0.022 0.124 -0.210 0.000 -0.140 -0.105 -0.344 -0.347 -0.347 -0.234 -0.234 0.000 -0.151 0.247 0.247 0.265 0.265 0.227 0.000 0.310 0.000 0.000 0.000 -0.268 -0.268 -0.138 -0.138 0.000 0.000 0.000 0.000 -0.410 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 -0.204 -0.046 0.022 0.124 -0.210 0.000 -0.140 -0.105 -0.344 -0.347 -0.347 -0.234 -0.234 0.000 -0.151 0.247 0.247 0.265 0.265 0.227 0.000 0.310 0.000 0.000 0.000 -0.268 -0.268 -0.138 -0.138 0.000 0.000 0.000 0.000 -0.410 0.000 0.000 0.000 -0.117 0.000 8.1752222 8.4858293 4.5600974 9.3990350 13.1567072 4.8312388 9.6397701 9.6839654 7.7872137 -1.5894418 12.4933310 12.1537069 5.2432387 2.1107975 1.5802902 8.6355578 5.2683296 11.7000811 11.5373774 10.2523078 9.9990650 1.9953036 8.6379663 9.8512195 8.0176809 9.1560247 3.2177115 NA 10.9348920 5.4437724 7.4818123 9.0551081 6.1652387 9.3154514 9.5575552 4.4764400 7.9299868 -0.5896589 8.3689032 12.1910952 7.5877700 7.3557942 -1.5894418 7.4271586 7.8941660 3.5802782 1.5802902 12.5894819 7.0360593 5.9590955 3.8366109 10.8013254 -1.5894418 7.9514468 10.7359369 10.5952257 5.8449781 11.2183089 13.9087633 10.1475977 5.4327189 4.3876314 9.9567625 2.6582800 NA NA 0.9953036 11.364539 7.246400 8.716412 15.985269 9.874386 10.615533 12.558509 9.201513 9.523585 10.184726 13.012759 10.202327 8.986835 7.995313 1.217727 9.557555 10.995782 11.0683386 12.2912731 5.4666075 13.7820923 9.1425178 6.9260504 8.4354898 8.3262299 10.7035519 7.0139769 7.6818133 9.5057475 6.3351634 0.7323126 10.5299400 6.3818942 7.4956368 10.6267931 10.2975710 10.7755792 8.8748962 7.7962129 9.1280268 9.7175512 10.9214037 9.3044102 10.7364989 10.4430849 10.8924020 8.7401467 10.7305868 10.6415715 9.1710702 7.3990352 9.5783768 7.7135377 12.0565715 10.2998543 11.0730187 7.9745001 11.1120900 10.4029347 7.2464005 13.7125462 10.6588710 11.2078092 11.9862441 11.0007035 5.3761341 2.7322692 10.6292163 9.8418480 9.3557942 TCGA-C8-A27A 48 0 NA 747 breast stage iib t2 n1 m0 female 2010 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 1 2 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.895554e-07 1.733986e-07 36.3636363636364 22.7272727272727 4.54545454545455 13.6363636363636 22.7272727272727 11.2711502 10.4377865 11.4422797 9.8234075 8.8641620 9.4712783 9.6655390 11.2850480 9.0958669 13.6762088 10.6092990 11.2371781 0.3476657 11.8183330 3.9083902 7.6312258 6.5414451 8.9423720 4.5803324 13.1054808 -0.9742624 14.0336712 0.3476657 8.9733831 11.5639350 8.6349246 3.3833034 6.9114423 9.5750494 3.8331026 7.9190474 7.8586363 0.6107001 4.6107060 9.5784152 9.8774950 9.6210035 9.2100016 10.0908255 11.8233063 11.9427451 11.0442940 13.6601033 9.0007485 9.4764418 10.9880998 12.1596107 7.2400653 6.3744744 9.3772374 10.1283780 -0.3892999 10.5714345 9.1900244 5.0918352 4.0481141 11.6199540 12.2878409 9.5998665 10.8615990 12.8951471 8.2689200 11.4707609 11.0139354 11.3589014 11.1614554 4.9446102 12.3930925 11.9555592 0.3476657 10.0257460 9.1881373 3.7286824 3.9326376 11.0935165 11.0294396 10.6616908 10.4367273 0.8330925 7.3318073 11.0956992 10.4756685 10.2515560 8.8111984 0.073356 0.073356 0.082141 -0.030909 0.025766 -0.424000 -0.374530 -0.376990 3.656900 3.656900 3.656900 0.059605 -0.754320 0.854760 -0.179270 1.262000 -0.642670 -0.310480 0.026609 0.104490 1.565900 -0.693350 0.966720 0.846850 -0.676840 -0.676840 -0.676840 0.443020 -0.240500 -0.336220 -0.305260 0.012005 0.019458 0.030828 -0.755500 -0.737250 -0.360140 -0.376990 -0.378710 0.056182 0.066469 -0.810320 -0.398120 -0.016716 0.035503 0.129430 -0.754320 -0.925800 -0.718200 -0.562890 -0.275390 -0.275390 -0.742230 -0.307370 -0.331460 0.026609 0.104490 0.104490 1.469800 0.031388 -0.732160 0.195830 -0.118770 -0.623630 -0.676840 0.059320 0.143800 -1.292900 -0.843660 0.000 -0.746 0.113 -0.162 -0.742 -0.310 0.000 0.104 -0.320 0.000 0.000 -0.541 0.153 0.266 0.266 -0.677 -0.677 -0.309 -0.309 0.000 0.384 -0.284 -0.769 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.695 -0.375 -0.375 0.000 0.000 -0.449 0.361 0.000 0.000 0.000 0.000 0.000 -0.746 0.113 -0.162 -0.742 -0.310 0.000 0.104 -0.320 0.000 0.000 -0.541 0.153 0.266 0.266 -0.677 -0.677 -0.309 -0.309 0.000 0.384 -0.284 -0.769 0.000 0.000 0.000 0.000 0.000 0.000 -0.695 -0.695 -0.375 -0.375 0.000 0.000 -0.449 0.361 0.000 0.000 0.000 0.000 8.32266233 NA 5.45201220 9.24067233 11.96596786 6.89144835 9.55810191 8.86134657 7.53670803 -1.97426244 10.87358638 10.93341411 5.96238476 0.61070006 5.17549267 8.24491464 5.01443118 10.29165409 11.18467126 10.97557273 9.72705253 1.72617728 9.10122512 9.77142030 5.38329648 1.48516918 5.22541762 NA 10.01514057 8.32952683 4.79393229 8.64871313 2.61070006 9.27761891 10.87182402 -0.97426244 7.90838902 NA 8.57553055 11.35652289 8.70258448 8.85626117 NA -1.97426244 8.80710565 1.61070006 2.02573756 -1.97426244 3.54931184 6.16652465 1.19566256 10.49054707 NA 10.57985520 10.45201076 10.17263290 3.97994301 8.32266233 14.00764774 5.40078382 4.54930568 4.38329648 11.04394621 7.62751710 0.34766566 2.11320040 0.02573756 13.429363 5.443600 9.408910 11.818333 10.493150 10.818740 13.105481 13.081071 9.694631 10.286078 12.306734 12.450044 9.377237 8.503504 1.195663 8.125094 11.727269 11.0142533 12.0524424 7.6200710 13.0047661 8.6153972 4.5175970 9.5658742 10.3986111 11.1552303 4.5335384 11.3374944 10.6092990 7.6088285 1.6107001 11.2843121 6.7570646 10.3382916 10.8540809 10.0080266 11.3565229 9.6848499 9.4367274 11.2690688 6.4892700 11.8617776 9.6210035 10.6312255 9.7922749 11.5411995 9.0715058 11.4841526 10.8122199 9.7030252 -0.9742624 9.0516815 6.7885265 10.1283780 6.8899322 10.5714345 6.1754927 11.2033213 11.6199540 7.5316965 13.4787916 10.3810971 10.6144607 11.8652451 9.4430712 -0.3892999 NA 10.7866739 10.3728137 10.1834087 TCGA-C8-A27B 48 0 NA 439 breast stage iib t3 n0 m0 female 2011 NA no infiltrating ductal carcinoma NA asian not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.572012e-06 8.669932e-07 7.8125 42.1875 3.125 28.90625 17.96875 10.5488626 9.3308210 11.3948750 10.2941002 8.8920018 9.3993433 8.5420591 11.0235478 11.5050929 13.1605578 9.7435173 11.1023975 -0.9376019 10.0172023 3.9449240 10.0106461 4.4716687 8.0929463 9.0040603 8.1430964 -1.9378783 9.8341811 5.5700743 9.1902734 10.9671017 8.9303299 5.0846468 10.5963386 12.1631055 0.3841604 8.7267263 8.6091736 -0.9376019 4.8304632 9.8684258 10.3340338 9.0984525 10.8469139 9.8864422 11.3825154 0.3841604 7.8840527 14.1148683 7.4902412 9.4427401 11.0652698 10.4405739 3.2717394 NA 9.5931730 11.0422400 NA 10.8981320 6.5052224 7.9046292 4.7627209 8.9349537 12.4515742 9.9963383 11.1317288 13.3213969 4.4021287 11.4140464 9.8953350 12.1868042 11.4028245 4.2910952 12.3223899 8.7007151 1.0622599 9.5155496 9.5873102 3.2744555 4.9811403 12.1995904 10.5638674 10.9544423 10.4449030 NA 3.3842018 12.6475937 12.0475873 9.9132471 9.0359763 0.4807900 1.3919000 -0.3795400 0.4307500 -0.3623300 0.6997000 0.0000000 0.1068700 0.0428740 0.4209900 2.0036000 0.4238500 0.0486880 0.4223400 0.0280600 0.0420240 -0.4018500 0.0652260 0.1083300 -0.3457200 0.0553730 -0.3911800 -0.3911800 -0.3911800 0.3813800 0.3660800 -0.3969700 -0.3946400 -0.4024100 0.4807900 0.0629370 -0.3753800 -0.3742600 -0.8057500 -0.3825700 -0.3773000 -0.4028500 -0.3541900 -0.3735400 -0.3683900 -0.3458400 -0.8364800 2.0733000 -0.3926100 0.4120900 -0.3864900 -0.3722300 -0.0041546 0.0424490 -0.3628300 -0.8463600 -0.8463600 -0.7941900 0.0391650 -0.0030475 -0.3692900 -0.3699700 -0.3899200 -0.0380340 0.3210900 -0.3911800 -0.3911800 -0.8099700 0.0277780 -0.3969700 0.0210190 -0.3552100 0.0351000 0.4571700 0.396 0.000 0.000 0.000 0.000 0.000 0.000 -0.370 0.000 -0.407 -0.407 -0.391 -0.391 0.000 0.000 0.000 0.000 0.481 0.481 0.000 -0.395 -0.355 0.000 0.000 0.000 0.055 0.431 -0.374 -0.374 0.711 -0.377 0.000 0.000 0.000 0.000 -0.836 0.000 -0.377 -0.377 0.000 0.000 0.396 0.000 0.000 0.000 0.000 0.000 0.000 -0.370 0.000 -0.407 -0.407 -0.391 -0.391 0.000 0.000 0.000 0.000 0.481 0.481 0.000 -0.395 -0.355 0.000 0.000 0.000 0.055 0.431 -0.374 -0.374 0.711 -0.377 0.000 0.000 0.000 0.000 -0.836 0.000 -0.377 -0.377 0.000 0.000 8.44057396 NA 3.70613267 10.51271696 11.91510103 5.51225217 9.66729537 10.38983157 7.32322233 NA 13.28948124 10.92702227 0.64726845 NA 3.06227717 9.09018495 4.43732097 10.86034567 11.30500652 10.92859203 8.81716659 -1.93787829 10.01210575 9.86115578 6.52988496 5.76271821 1.23223095 -1.93787829 11.29124796 0.86963456 6.82382959 8.48329180 7.54407807 8.87187013 10.94128777 3.92026471 8.54407846 -0.35273155 9.44436248 12.75614704 7.72761487 6.07908792 -0.35273155 2.23220025 7.90462920 3.67698948 1.96915970 NA 6.97815787 2.92025518 3.70613267 11.33505454 2.64724542 11.39822754 11.92307499 10.57353747 5.02806518 9.54104859 13.81180801 10.71624364 8.22844210 3.84364222 10.36263152 0.06225989 4.66219410 1.64722240 10.57501946 10.378843 8.591710 7.887238 10.017202 10.187692 11.813509 8.143096 12.117138 9.266239 10.292299 13.642302 11.877662 9.593173 7.802059 2.384216 8.631185 11.397948 10.086033 11.073856 9.964277 14.978904 9.832943 6.783378 9.837889 9.594148 10.294490 6.609173 4.454597 9.743517 9.213930 NA 10.728947 9.288089 10.079317 12.051052 10.785513 10.481449 8.529885 7.798681 9.527335 7.647242 9.847163 9.098452 10.451372 9.049543 11.737905 11.065797 12.083693 10.440845 8.079087 NA 8.244798 6.929558 11.042240 8.112128 10.898132 4.720492 10.165560 8.934954 8.125674 14.481383 9.963523 9.914028 12.600953 11.010829 2.521704 2.232200 11.455938 10.168187 8.938028 TCGA-C8-A3M7 60 1 1034 NA breast stage iiib t4b n0 m0 female 2010 NA yes infiltrating lobular carcinoma 0 asian not hispanic or latino NA NA 2 3 4 3 2 3 4 3 6 2 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.780091e-06 1.28315e-06 16.8918918918919 62.1621621621622 0.675675675675676 14.1891891891892 6.08108108108108 10.6122131 9.9957635 11.0084562 8.8769601 8.2532240 9.1726768 10.2590296 9.3593633 11.0040841 10.0054661 10.8212823 10.5472716 1.8515592 12.2361563 3.2990248 9.5342441 6.1800404 8.9244931 7.9038897 12.7488642 -1.6077925 11.9781559 6.2686533 9.1652764 10.7078528 5.9467262 -0.6077925 9.3441503 9.2671184 3.7140696 8.8719172 7.5058790 NA 7.5595553 10.1549344 10.4514816 9.1553495 10.8939743 10.6430277 11.7321262 12.0974455 10.3466970 14.6064752 7.1030129 11.0731559 10.7964804 10.1536883 5.5520081 6.1403308 8.9770996 11.8613973 -0.0228300 11.2429099 5.0068456 6.0856244 2.5620592 10.5016413 11.9297195 10.3618834 11.5757725 12.8031184 6.5819613 10.6119106 10.5214201 11.3390434 11.0788564 4.5006619 11.4637671 10.6821559 NA 9.9205912 9.1792234 4.7525024 4.9920478 10.1763629 10.2293708 9.6624325 9.7513375 4.3921388 9.8412857 13.6087693 12.3379467 9.6251576 9.7392048 0.3327000 0.6790100 0.0027745 0.0027745 -0.0290380 0.0073609 -0.0465830 -0.0465830 -0.0020784 -0.0020784 0.0061090 0.0181030 0.0216030 -0.0184900 -0.0162920 -0.0162920 0.0188030 0.0188030 0.0000000 0.0235660 -0.0700010 -0.3492700 -0.3492700 -0.3492700 0.0479780 0.0363200 0.0363200 0.0269350 -0.1405200 -0.1405200 -0.1343200 0.0027745 -0.0073339 -0.0323020 0.0073609 0.0073609 -0.0465830 -0.0465830 -0.0465830 0.3023400 0.3082600 -0.0020784 0.0045800 0.0045800 0.0045800 0.0193630 0.0216030 0.0308730 -0.0184900 -0.3546400 0.0283410 -0.0091286 0.0188030 0.0188030 0.0188030 0.0045800 0.0235660 0.0235660 -0.0700010 -0.3522500 -0.3492700 -0.3492700 -0.3713200 0.0479780 0.0363200 0.0269350 -0.0117490 0.0310140 0.0310140 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.182 -0.360 -0.349 -0.349 -0.374 -0.374 0.000 0.000 -0.141 0.535 0.000 0.000 0.000 0.000 -0.134 -0.134 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.302 0.302 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.182 -0.360 -0.349 -0.349 -0.374 -0.374 0.000 0.000 -0.141 0.535 0.000 0.000 0.000 0.000 -0.134 -0.134 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.302 0.302 0.000 0.000 0.000 0.000 0.000 0.000 8.0141890 6.2563238 7.7496891 10.7400352 11.0707372 6.2393197 11.3672686 10.5873340 8.1892958 2.7140696 12.4307989 10.9115154 4.7140641 2.5620592 4.6959159 7.9038897 3.4796057 10.8551505 11.4619225 10.4005657 9.2555491 1.1994996 8.6028083 10.0930103 7.8638121 6.9428839 -1.6077925 -0.6077925 12.1640392 7.9864616 8.1865530 7.6471655 8.2391947 10.2201109 10.0301204 4.0645639 8.3139782 -0.0228300 8.9976167 12.8442496 8.8869927 9.4782733 -0.0228300 5.6113052 8.1046643 0.9770967 5.1603232 3.6400656 5.6209558 4.5650670 3.4365350 10.4079006 1.1994996 10.7666333 10.9792114 9.9063581 6.9078365 10.0100637 11.4672819 8.2701879 1.5620836 4.6959159 9.7887418 -1.6077925 NA 0.7140476 2.6400656 11.522852 6.099497 9.014189 12.236156 10.687430 11.389846 12.748864 9.741971 8.999467 10.473953 13.114091 9.467616 8.977100 7.640065 1.392153 7.380822 12.033060 10.8220669 12.4644372 7.3722765 14.5654408 9.1098134 6.8556609 9.1183553 7.6281510 10.3235690 6.5570439 7.7844543 10.8212823 6.6448023 3.3921388 11.0790753 8.6197530 6.5913683 11.7034597 10.5708020 11.3968842 7.7823063 8.8495180 10.7375424 7.7540811 11.9525750 9.1553495 10.4722884 8.8929790 11.4453842 10.6556998 10.1072411 10.4491135 8.5304091 9.5570439 9.9874646 8.8238853 11.8613973 8.4528330 11.2429099 5.9770990 10.7369878 10.5016413 6.9120486 14.3168072 9.9845942 10.6483458 11.9781559 10.5107538 -0.0228300 0.0881416 10.6061526 10.2238401 9.8009976 TCGA-C8-A3M8 68 0 NA 394 breast stage ia t1c n0 m0 female 2011 NA no infiltrating lobular carcinoma NA asian not hispanic or latino NA NA 1 2 2 2 1 1 1 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 1.144431e-06 2.080784e-07 15 17.5 7.5 37.5 22.5 10.24158603 9.92203918 11.41855539 9.17392693 9.20620047 8.31831684 10.88101199 9.57187909 9.97994916 14.54991299 11.62558708 10.63686629 1.09308686 14.20591540 4.02384970 8.83457629 5.28293273 8.50037704 9.01940531 13.46672228 0.41500143 14.64570346 2.09312068 9.43468389 10.94641894 8.76906655 0.41500143 8.16050326 7.61862997 3.00000000 7.13202874 6.68556597 -1.90671027 5.32192809 10.05672807 9.72837412 9.62692585 9.82739558 10.15987134 10.87426420 2.00000000 11.27627954 14.92598706 8.51230077 10.03488698 10.82506475 11.51648798 4.64770017 7.12377689 10.03415696 9.77960988 0.09315449 10.44128427 3.84799691 3.95109351 3.84799691 9.72155500 11.66628317 10.39603390 12.72638848 12.67865883 9.00824176 10.93172242 10.46405834 11.00805508 10.60856283 4.55254307 12.39016896 12.42668408 -0.90698077 10.31861816 8.95806922 3.84932878 4.09311222 9.98641094 9.66580969 10.18817675 10.02937931 2.48542683 7.22496637 12.45347642 10.15448055 8.12515513 9.57843553 1.01360000 1.13720000 -0.00470790 1.15640000 0.00110930 0.11800000 -0.01285100 -0.00475640 0.56028000 0.56028000 -0.01436600 0.00055459 0.03045100 0.00791750 1.75760000 -0.63708000 -0.00816240 -0.00816240 -0.64038000 -0.00026399 0.00000000 -0.04428000 0.55968000 0.55968000 -0.02753500 -0.02753500 -0.02835500 0.61426000 -0.02917500 -0.01243800 -0.00083160 -0.65463000 0.00110930 0.00110930 0.07757400 0.07757400 -0.66624000 -0.00475640 -0.00475640 -0.00733390 -0.00180140 -0.64874000 0.00583090 0.00583090 0.00583090 0.00583090 -0.64170000 -0.64170000 0.00791750 -0.67085000 -0.64208000 -0.64208000 -0.00816240 -0.00816240 -0.00816240 -0.64038000 -0.00026399 0.00694350 0.00000000 -0.64668000 -0.65435000 0.55968000 0.00861350 -0.02753500 -0.02753500 0.61426000 -0.00124730 -0.00138580 -0.00138580 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 0.000 0.000 0.000 0.000 0.000 0.560 0.000 0.000 0.000 0.000 0.000 1.137 0.614 0.614 0.000 0.000 0.000 0.000 0.000 0.575 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.640 0.000 0.000 0.000 0.000 0.000 0.560 0.000 0.000 0.000 0.000 0.000 1.137 0.614 0.614 0.000 0.000 0.000 0.000 0.000 0.575 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.634 0.000 0.000 0.000 0.000 0.000 8.65153000 5.46814992 6.16457110 9.93859941 11.38240788 6.98537861 12.14040377 9.01247174 9.57557460 0.90049009 11.93957921 13.00405750 4.93860102 4.24285398 4.28293643 7.01197301 3.41504201 9.68650053 11.82379183 11.01717957 9.86871963 7.26803477 7.55867555 9.66959375 6.33628339 7.29768024 3.97574940 -1.90671027 10.40258576 6.48542683 6.97880540 8.29400816 5.45943162 11.35475336 11.16842141 2.18056164 9.30621370 NA 7.65153036 11.83426036 9.27239651 9.31771401 -1.90671027 5.66296596 9.39517701 NA 5.50249928 3.90046111 2.90047077 5.21567860 1.41505553 10.07146236 1.90045145 8.25801617 10.67713232 9.78920758 5.34103573 8.52669485 11.04821438 6.89400890 2.55254922 2.79354219 14.25493019 3.70782293 NA 3.95109351 0.09315449 15.173563 6.761994 8.746850 14.205915 9.446256 11.006747 13.466722 13.921791 8.042936 10.455053 12.891125 10.349023 10.034157 8.517276 1.093087 7.951091 12.075479 11.4696418 12.0194054 6.4105226 13.1534241 8.7952822 4.5688408 9.0596149 9.5277376 10.6693929 5.7004397 7.5401924 11.6255871 7.8004683 -1.9067103 10.9088930 6.4059924 7.6548938 10.6698300 9.3923174 11.2390416 8.0675242 9.3645724 11.7517672 3.4150420 10.7381733 9.6269259 10.7531053 9.1685886 11.3864374 10.6532034 10.7131001 11.0015020 8.6695938 NA 9.1050565 6.6950654 9.7796099 3.7935526 10.4412843 6.2120498 10.8276073 9.7215550 7.7926816 12.8012772 10.2396781 9.6186302 12.3059097 10.6102867 -0.9069808 NA 10.1622235 10.4093909 10.4629794 TCGA-C8-A8HP 59 0 NA 396 breast stage iiia t2 n2 m0 female 2013 NA no metaplastic carcinoma 6 asian not hispanic or latino NA NA 1 3 5 3 2 6 4 9 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.864338 8.552718 11.035725 8.036142 7.971253 9.563185 9.956330 10.416323 10.568967 14.198394 10.322229 10.895044 1.281253 17.522610 2.603193 10.608807 4.235451 8.005769 5.347343 11.981695 NA 11.848022 7.120459 10.061590 10.568390 9.098238 5.471080 13.127841 11.138847 NA 7.139236 6.176073 NA 6.740686 9.262822 9.806776 9.007473 9.940359 9.307778 10.390433 12.175125 7.906964 14.497622 6.334366 9.884863 9.687460 9.375333 4.235451 3.673568 7.686396 10.105418 NA 9.986023 4.835843 7.607685 6.400196 10.026089 11.086192 10.118883 10.949697 12.728596 8.206067 10.682134 9.798924 10.676253 10.143892 3.088617 11.566946 10.027769 2.740690 10.387163 8.009175 4.245191 5.211993 8.552718 9.427187 9.873712 8.759013 2.451172 8.732466 12.798186 11.732724 8.978222 9.613291 -0.0435000 0.1890400 -0.1628100 0.1234400 -0.1570700 0.0272160 -0.0113350 0.4159700 0.1293300 -0.0590220 0.0698370 0.0950100 1.8912000 -0.1178300 -0.1178300 -0.1178300 0.0544210 0.0544210 0.0000000 -0.1619200 -0.1874800 -0.1872200 3.6569000 0.1640000 -0.1928700 0.0029133 0.0857990 1.6655000 -0.0435000 -0.0435000 0.1099400 -0.1628100 -0.0392580 -0.1634500 0.0272160 0.0272160 -0.0113350 -0.0113350 -0.1775200 0.0898510 0.0898510 -0.3256500 -0.1733500 -0.1733500 0.2925100 0.2925100 -0.1733500 -0.1733500 -0.0363450 -0.1178300 -0.1178300 -0.1178300 0.0544210 0.1068700 0.1068700 0.0000000 -0.1809300 -0.1809300 0.8518500 0.3112900 -0.1872200 -0.1840800 0.0910100 -0.1455400 -0.1924900 -0.0602110 -0.2667300 -0.1840800 -0.1840800 0.180 0.180 0.000 0.000 0.000 0.000 0.000 -0.181 -0.129 0.264 0.264 -0.186 -0.186 0.000 0.000 -0.146 0.000 0.120 0.120 0.000 0.000 -0.252 -0.184 0.148 0.148 -0.038 0.125 -0.163 -0.163 0.000 0.000 -0.171 -0.171 0.000 0.000 0.000 0.000 -0.173 0.119 0.000 0.000 0.180 0.180 0.000 0.000 0.000 0.000 0.000 -0.181 -0.129 0.264 0.264 -0.186 -0.186 0.000 0.000 -0.146 0.000 0.120 0.120 0.000 0.000 -0.252 -0.184 0.148 0.148 -0.038 0.125 -0.163 -0.163 0.000 0.000 -0.171 -0.171 0.000 0.000 0.000 0.000 -0.173 0.119 0.000 0.000 7.9251111 NA 7.1516194 10.8262192 11.5856061 7.6331660 11.7531840 8.2856440 9.6141304 0.2813125 12.5147247 11.3357710 3.8048177 0.2813125 2.2812531 8.0193472 4.9536796 11.4617856 10.6901153 9.8624554 8.8848812 7.6166451 7.7930076 9.9205955 7.6255511 6.7731075 6.9607353 NA 10.2882821 3.6735677 6.7731075 7.3949968 9.6573803 11.0502000 10.1806117 3.4511847 9.1941442 NA 8.8415876 11.6985799 9.6497613 10.6244405 NA 6.0361428 8.2499217 5.3897802 3.6031812 0.8662354 7.0159647 4.1924704 4.2812531 12.3904325 7.8087319 8.9160658 11.1372912 9.9842931 6.3792865 10.0845787 12.7864461 8.6475771 5.8811678 4.4105378 9.5997976 -0.7188062 0.2813125 NA 2.7406901 10.808527 8.618877 9.029448 17.522610 10.320983 11.366063 11.981695 9.524429 8.578171 10.055218 12.507065 8.151619 7.686396 8.418246 2.981688 7.336537 11.991846 11.936115 14.513938 4.866216 13.647301 8.828149 7.062615 9.436073 8.194144 11.645006 8.029448 10.076483 10.322229 7.707519 NA 10.353387 9.991200 9.457989 10.223036 11.210513 10.815558 6.325649 10.313989 6.946591 8.835844 11.217907 9.007473 10.160838 10.151620 10.277728 10.671961 10.469844 11.411825 7.603183 3.281253 9.866386 8.853121 10.105418 9.438602 9.986023 6.441127 11.755468 10.026089 7.420806 13.253963 10.502238 9.966880 11.746311 11.434490 5.139236 2.281253 9.709615 9.163898 10.197134 TCGA-C8-A8HQ 53 0 NA 380 breast stage iib t2 n1 m0 female 2013 NA no mucinous carcinoma 3 asian not hispanic or latino NA NA 1 2 1 2 1 2 4 8 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.78531154 9.38727464 11.20457114 8.34964349 8.61369408 9.11679204 10.12081886 10.27492030 11.26626148 13.92401898 11.27792862 10.49840217 1.63384966 12.96640601 2.71186930 10.34620799 5.54076195 8.43692679 7.51107107 12.22695193 0.02955890 11.71779460 5.57247135 9.64168438 10.81709390 7.06385990 2.16440014 10.22008637 9.92030149 0.78584346 8.55405964 6.80379661 -1.53616832 4.37084082 9.57703808 10.30904507 8.81046078 11.62712500 9.69756673 10.92619376 8.89335372 10.12305105 15.22339321 7.60434269 9.38725224 10.32231667 10.87519328 5.04890750 6.90689060 8.50834110 10.13283206 1.04893365 10.99117970 4.74935191 6.72604237 5.09330241 10.46147945 12.10735238 10.57410416 12.47263832 12.88515724 9.01565534 11.22923323 10.76550615 11.12527985 10.27933037 4.27129867 11.60557531 12.09148097 0.04893365 10.44337230 8.80935238 4.16466562 4.85626366 10.88837583 10.24571657 10.23584922 9.63136516 2.71186930 9.43261393 13.56066225 11.81032231 9.73014794 10.21549114 0.6222400 0.6061100 0.0413170 0.0083351 -0.0217840 0.0111210 0.0228650 0.0000000 -0.5808800 -0.5808800 0.0125160 0.0179630 0.0202030 0.0260920 0.6297000 -0.5980800 -0.0160170 -0.0102320 -0.0042929 0.0339720 0.0308730 -0.5743700 0.0473230 0.0473230 -0.1968700 -0.1968700 -0.1968700 -0.2456900 -0.5705100 -0.5978900 0.0239870 -0.6041000 -0.0291750 -0.0217840 -0.0070576 -0.0070576 0.0230050 0.0000000 0.0141900 0.0105540 0.0126550 -0.6259800 -0.0037143 -0.0037143 -0.0037143 0.0204830 0.0202030 -0.5966300 0.0260920 -0.6132600 -0.6040500 -0.6040500 -0.0160170 -0.0102320 -0.0102320 -0.0042929 0.0339720 0.0535830 0.0308730 -0.5827800 -0.5743700 0.0473230 0.0262330 -0.1968700 -0.1968700 -0.2456900 -0.6310200 0.0745520 0.0745520 0.000 0.000 -0.604 -0.604 0.000 0.000 0.000 0.000 0.000 0.000 -0.569 -0.574 0.000 0.000 0.000 -0.197 -0.197 0.000 0.000 -0.246 -0.246 0.000 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.581 -0.581 0.000 0.000 -0.032 -0.366 0.000 0.000 -0.604 -0.604 0.000 0.000 0.000 0.000 0.000 0.000 -0.569 -0.574 0.000 0.000 0.000 -0.197 -0.197 0.000 0.000 -0.246 -0.246 0.000 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.581 -0.581 0.000 0.000 -0.032 -0.366 8.55140989 0.04893365 6.04890968 10.41450301 11.61528083 7.52220958 11.85277164 9.14590591 9.39080653 2.16440014 12.63832667 11.94066039 4.32192809 -0.53595913 4.27129867 7.51107107 4.21883540 11.44533600 10.99215703 11.01997408 9.40426068 3.89021320 7.89439944 9.89492232 6.92337860 5.06386098 5.62381712 NA 10.30275703 5.58288713 8.60605426 7.58548088 4.85626366 11.14368888 10.51481602 3.82149594 9.58806846 NA 6.74934923 12.28312827 8.99240108 8.10960555 -1.53616832 1.92337741 8.14694181 -1.53616832 4.48631536 2.16440014 6.32813275 6.19628442 3.37083385 10.58191478 3.41814946 5.99532848 10.63449816 10.07035229 5.55141143 9.88968754 12.80198703 8.51787289 4.80379532 4.24530550 10.68432539 3.67339813 -1.53616832 0.46393628 0.04893365 13.523226 6.781360 8.690359 12.966406 10.460774 10.866959 12.226952 12.803797 8.489086 10.269691 13.200613 9.968766 8.508341 10.336237 3.048916 7.463947 12.087028 11.430453 12.602299 6.277728 13.457058 8.517873 6.588068 9.148696 8.836812 10.354515 7.673400 5.963793 11.277929 7.508341 2.271306 10.165254 9.262419 7.732770 10.445158 9.946251 11.203939 8.369334 9.498058 9.762583 6.923379 12.960662 8.810461 10.626653 9.565923 11.067110 10.551741 9.538089 10.555052 8.212140 NA 9.631309 8.370432 10.132832 7.735410 10.991180 6.939680 10.578991 10.461479 7.202343 12.964789 9.776830 9.898575 12.242435 11.442836 2.463936 9.159906 9.038541 10.018056 9.738325 TCGA-C8-A8HR 49 0 NA 408 breast stage iiia t3 n2 m0 female 2013 NA no infiltrating lobular carcinoma 5 asian not hispanic or latino NA NA 1 3 1 2 3 4 4 3 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1715948 9.2061262 11.4319418 8.3834961 8.5690517 9.0425847 10.0245584 10.0803044 11.4498384 12.0752052 10.8122584 10.2445301 0.3891262 12.4818996 2.2636054 10.0768097 6.4408044 8.7050469 8.8969372 11.5061362 2.8916525 13.0043123 5.5590665 9.7180268 10.5611532 5.6989991 0.3891262 9.7147852 10.8489156 3.6621599 8.8403537 7.5490137 0.8042188 5.1440300 9.6989977 9.9482009 8.9347506 9.9353939 9.3050218 10.8195951 4.3277448 9.5855397 14.8474636 8.0567271 9.7942839 10.9539271 10.6307284 5.3277412 6.1261077 8.7540066 10.9772324 NA 10.8320859 7.4766053 6.5252796 4.8265485 10.1085313 11.8162807 10.1294855 11.9339459 12.5642761 8.2135709 10.7286214 10.3451458 11.0154599 10.9731654 4.5590696 11.3032784 11.5787611 1.1261139 10.4690716 9.1418019 4.0167459 5.8702685 9.9778572 9.4597107 10.6311257 9.4133586 4.0895829 8.4059507 13.5318346 12.6533896 9.6211636 9.7750049 0.1510200 0.1510200 -0.0472730 0.0819260 -0.0447960 0.0721360 -0.1174100 -0.1174100 0.1083600 0.1083600 0.2574900 0.0188290 0.0188290 0.1152400 0.0163160 0.0163160 0.0108690 0.0198090 -0.1844300 -0.0609920 -0.0291490 0.0303360 0.0303360 0.0303360 -0.0014983 -0.0014983 -0.0201490 0.1605800 0.0000000 0.1510200 0.0121230 -0.0472730 -0.0798580 -0.1637400 -0.1910900 -0.1910900 -0.1174100 -0.1174100 -0.1953500 0.0518560 0.0518560 -0.1962600 -0.1107400 -0.1107400 -0.1107400 -0.1107400 0.0188290 0.0188290 0.1152400 0.0163160 0.0188290 0.0188290 0.0198090 0.0198090 0.0198090 -0.1919700 -0.0609920 -0.0609920 0.1006300 -0.0948310 0.0303360 0.0303360 -0.0450680 -0.1875800 -0.0201490 0.1605800 -0.1942200 -0.0111720 -0.0111720 0.000 0.000 0.000 0.000 0.000 0.000 -0.184 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.151 0.161 0.161 -0.194 0.000 0.000 0.000 0.000 0.000 0.000 -0.119 0.000 -0.191 -0.117 -0.117 0.000 0.000 -0.088 0.108 -0.111 -0.111 -0.124 -0.124 0.000 0.000 0.000 0.000 0.000 0.000 -0.184 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.151 0.161 0.161 -0.194 0.000 0.000 0.000 0.000 0.000 0.000 -0.119 0.000 -0.191 -0.117 -0.117 0.000 0.000 -0.088 0.108 -0.111 -0.111 -0.124 -0.124 7.9386063 NA 6.4695165 11.1353769 11.7496238 7.9118420 10.1456989 9.6098111 9.4077506 4.1964969 12.4636185 11.6826160 4.5590696 1.6115501 4.9539264 8.2819384 4.1964969 11.4133587 11.3695201 10.1617320 8.7095670 3.4480419 9.2707663 10.6414137 7.4871744 7.5218564 -1.1959464 0.3891262 11.0369007 6.6115354 7.8702692 8.0686224 7.7408176 11.1617925 9.7985334 4.9940049 9.1306094 -1.1959464 8.5046196 12.4154354 9.8202918 9.3316571 NA 3.7583778 8.3891426 -1.1959464 6.0803038 NA 6.6370697 5.5985945 3.8041775 10.3558882 NA 9.2156910 10.4792549 9.7807441 6.2220317 10.3673762 13.0793588 9.1617320 3.1261139 4.7814594 10.1091017 3.4480419 0.3891262 5.6243583 3.5590635 12.876230 6.462391 8.487174 12.481900 9.925066 10.423024 11.506136 10.797472 9.004588 10.409660 13.191861 11.382553 8.754007 7.562403 1.389126 8.075643 10.861495 11.475721 11.776980 5.838044 13.253969 8.929593 7.196498 9.386322 8.557397 10.156428 7.899577 8.822380 10.812258 7.292020 1.804177 9.858784 8.255391 7.539837 11.314697 10.723416 9.866901 9.095351 9.898258 9.512402 7.255391 11.200670 8.934751 11.041987 10.257451 10.572778 10.909761 10.227296 10.570295 8.669913 2.891652 9.812714 7.110515 10.977232 6.886329 10.832086 7.339455 11.175856 10.108531 7.213571 13.810068 10.034200 10.274330 12.112235 10.487613 5.746694 1.061223 9.868923 9.185723 9.586359 TCGA-C8-A9FZ 49 0 NA 592 breast stage iib t2 n1 m0 female 2013 NA yes mixed histology (please specify) 3 white not hispanic or latino NA NA 1 2 1 2 NA NA 3 8 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.0160450 0.0346770 0.0284810 0.0596510 0.0806010 -0.8949600 0.0577960 -0.9088100 3.6569000 0.8998900 -0.9847000 0.0066375 -0.0071850 -0.0150540 -0.0150540 -0.0121620 0.0315770 0.0315770 0.0454240 0.0478360 -0.0284910 -0.9750900 0.7621700 0.8492900 -0.1442500 -0.1442500 -0.1272000 -0.0419740 -0.0911550 -0.9024400 -0.0647940 0.0284810 0.0393720 0.0757030 -0.8398600 -0.8884300 0.0577960 -0.9088100 -0.9088100 0.0338310 0.0338310 -0.9689100 0.0382060 -1.2929000 -0.0138150 -0.0138150 -0.0071850 -0.0146410 -0.9562300 -0.0150540 -0.9407800 -0.9451800 0.0315770 0.0315770 -0.0571160 0.0454240 -0.9348900 -0.9300800 -0.0066432 -0.0294480 -0.9905300 0.7621700 0.0232860 -0.1442500 -0.1272000 -0.0419740 -0.0785440 -0.1030300 -0.1030300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.935 0.000 0.000 0.000 -0.991 -0.228 0.000 0.000 -0.144 -0.144 0.000 0.000 0.000 0.000 0.000 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 -0.895 -0.895 -0.909 -0.909 0.000 0.000 -0.940 0.000 0.000 0.000 -0.403 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.935 0.000 0.000 0.000 -0.991 -0.228 0.000 0.000 -0.144 -0.144 0.000 0.000 0.000 0.000 0.000 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 -0.895 -0.895 -0.909 -0.909 0.000 0.000 -0.940 0.000 0.000 0.000 -0.403 -0.403 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA TCGA-D8-A13Y 52 0 NA 1728 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 1 NA 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.525908e-06 5.548757e-07 18.3333333333333 40 0 26.6666666666667 15 9.724836 11.226971 11.094512 9.735996 8.117924 8.051983 8.142361 10.656329 8.404153 12.589712 11.044023 10.482073 3.794104 9.674811 2.546166 9.763524 5.955562 7.743388 7.688279 12.075968 8.519151 10.084361 6.146085 10.077031 10.047014 6.984963 4.886023 7.112226 11.005347 4.755625 9.290164 5.745845 3.675455 2.633640 10.029987 10.141895 9.121711 9.086300 10.083875 11.740313 1.353549 8.534857 13.666572 9.691938 10.764432 10.836767 10.510151 6.840793 4.568537 9.386163 9.995836 6.881562 10.752270 5.476910 4.190030 5.038023 8.416536 12.293945 9.793506 9.023930 11.857920 7.034012 10.947051 11.413452 10.715470 9.734761 4.612258 12.534501 7.731047 NA 9.956093 10.595680 7.497719 4.038023 8.783382 10.436056 9.662516 10.234859 7.347071 7.523451 10.399481 10.410358 10.576149 10.144224 0.0380650 0.0370760 0.8720900 -0.0128710 -0.8513000 0.8473100 -0.8924300 -0.8608200 1.0945000 0.3726500 0.8623500 0.0118180 -0.8657000 -0.0369460 1.1447000 1.1447000 0.0105640 0.8067500 -0.8446500 0.0104240 2.2129000 -0.8310900 -0.8310900 0.8083100 -0.8247200 -0.8247200 -0.8557400 0.8122000 -0.8339700 -0.0464480 -0.8425100 0.0248290 -0.8761900 -0.8690800 0.0151680 0.0290440 -0.8924300 -0.8608200 -0.0033243 0.0071848 0.0512450 -0.8777500 -0.8719700 -0.8719700 0.0058309 -0.8273300 -0.8657000 -0.8821500 -0.8674300 -0.0038779 -0.8632600 -0.8632600 0.0105640 -0.8561500 -0.8659400 -0.8446500 -0.8571800 0.0804560 -0.0076411 -0.8755700 -0.8642900 -0.8310900 -0.8916600 -0.8247200 -0.8247200 -0.0378980 -0.0309500 -0.8727600 -0.8729100 0.000 -0.866 -0.872 -0.872 0.000 0.000 -0.845 0.000 0.000 0.000 -0.876 -0.808 -0.808 -0.898 0.000 -0.825 -0.825 0.000 0.000 0.000 0.000 0.791 -0.873 -0.860 -0.860 0.000 0.000 -0.851 -0.851 0.000 0.000 0.000 0.000 0.000 0.000 -0.878 0.000 -0.872 0.000 -0.319 -0.319 0.000 -0.866 -0.872 -0.872 0.000 0.000 -0.845 0.000 0.000 0.000 -0.876 -0.808 -0.808 -0.898 0.000 -0.825 -0.825 0.000 0.000 0.000 0.000 0.791 -0.873 -0.860 -0.860 0.000 0.000 -0.851 -0.851 0.000 0.000 0.000 0.000 0.000 0.000 -0.878 0.000 -0.872 0.000 -0.319 -0.319 8.9891152 8.7797912 6.7009903 9.7610979 11.8680998 6.5200702 10.3563416 9.2952785 6.7797916 NA 10.8041487 12.5994213 8.8211320 NA 3.0055976 7.7604911 5.8860209 7.7749906 11.2717510 10.8726012 8.4635436 1.3535491 9.6303157 9.0949937 4.9724353 2.2466209 -0.4538340 1.1311285 9.6882786 8.4425040 8.5475798 9.3955768 6.9724365 10.7071587 10.8047377 0.5461660 8.8748464 NA 6.3853758 11.8763883 8.9309555 11.0777968 NA 4.2740902 8.2586989 NA 2.7941039 NA -0.4538340 1.1311285 -0.4538340 12.6229038 2.5461660 10.7973581 11.2137267 9.1654746 9.9534394 10.9653418 10.3438332 7.4886861 3.5461660 3.7941039 10.4149942 10.0244356 0.8681336 1.7161129 5.7260819 8.742651 8.656002 7.784577 9.674811 9.810614 11.188223 12.075968 13.352671 9.941143 11.080667 11.849667 9.801790 9.386163 7.479863 3.453057 8.284264 9.937415 10.5376935 12.5286305 8.8882464 14.1003996 9.0117176 6.7653398 9.0350160 3.5003687 9.5865779 4.3790595 9.1737056 11.0440235 8.5277389 1.7161129 10.9198525 8.7433884 9.6419116 9.8164669 8.3822220 10.6943305 7.4379551 9.4417470 9.3052275 0.8681336 11.2698774 9.1217109 10.0299874 10.3478800 11.7058854 10.2947838 10.9165867 10.4249889 8.4072584 1.3535491 8.5801726 10.3214939 9.9958362 NA 10.7522702 7.5517959 10.8425430 8.4165362 8.6561460 13.6558799 10.0137773 9.5369848 11.2657744 9.5553004 NA 0.1311944 10.8649969 10.3106286 8.8982150 TCGA-D8-A13Z 51 0 NA 635 breast NA t2 n2a m0 female 2010 NA yes infiltrating ductal carcinoma 9 white not hispanic or latino 3 2 4 NA 1 1 2 6 2 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.699307e-06 2.774378e-07 22.0338983050847 22.0338983050847 8.47457627118644 30.5084745762712 16.9491525423729 10.2219882 9.4609131 11.9180826 10.4200028 8.3187606 9.2672415 9.5953494 10.2988062 10.5663674 13.1586301 10.9428232 10.5454152 -1.8895031 11.8885009 3.1105303 9.6058819 3.5367865 8.4074428 7.8418455 12.6072554 0.6954594 6.5028445 6.7651621 9.4445929 10.7187812 4.3199791 3.0647277 8.9455187 11.6679902 1.8109777 9.0144083 8.4028479 NA 5.0293910 10.4171578 11.9113253 9.4114510 9.6870108 10.6331080 11.6355578 12.3654812 9.2164350 15.3379732 7.3252101 9.6992410 11.3042058 10.9712255 5.2294687 2.6340821 9.2481581 11.8610241 0.6954594 10.0852996 5.1873402 6.5451545 5.3866523 8.9528769 11.9929785 10.1228019 11.7384023 12.6180734 7.8787106 10.4125941 9.6271276 10.8303430 11.3316604 4.8654141 11.7292561 9.9422296 NA 10.2111888 9.5555413 3.2586546 5.4143081 11.6984211 10.1473868 9.9754863 9.4420034 3.9178804 9.8209024 13.2032836 11.5212428 11.0321814 10.0963683 0.553540 0.587930 -0.232270 0.269700 -0.500710 0.033690 0.707010 0.806170 2.191000 -0.735380 0.052241 0.522060 0.522060 -0.101970 -0.509290 -0.509290 0.748610 0.266870 -0.247880 3.656900 -0.327970 -0.157970 -0.157970 -0.157970 0.240080 0.240080 -0.070536 0.279210 0.154120 -0.137940 -0.250790 -0.232270 -0.506390 -0.777190 -0.505150 -0.018902 0.549120 0.608390 0.575230 0.000000 0.000000 -0.783800 -0.232640 -0.232640 -0.212310 -0.212310 0.522060 1.073800 -0.101970 -0.101970 -0.170690 -0.170690 0.534150 0.266870 0.266870 0.241400 -0.158730 -0.158730 -0.223790 -0.219230 -0.157970 -0.157970 -0.495590 0.240080 -0.070536 0.288980 0.505330 -0.263480 -0.263480 0.522 0.522 -0.102 -0.102 0.749 0.749 -0.248 1.060 -0.328 0.199 -0.021 -0.158 -0.158 0.250 -0.245 0.240 0.240 0.442 0.442 0.351 0.351 0.507 -0.263 0.599 -0.154 0.037 0.270 -0.501 -0.501 0.000 0.000 0.608 0.608 0.000 0.000 -0.784 0.000 -0.212 -0.212 0.000 0.000 0.522 0.522 -0.102 -0.102 0.749 0.749 -0.248 1.060 -0.328 0.199 -0.021 -0.158 -0.158 0.250 -0.245 0.240 0.240 0.442 0.442 0.351 0.351 0.507 -0.263 0.599 -0.154 0.037 0.270 -0.501 -0.501 0.000 0.000 0.608 0.608 0.000 0.000 -0.784 0.000 -0.212 -0.212 0.000 0.000 7.5430682 5.5028429 6.0705289 9.7983396 12.0531326 4.8788430 10.7380603 9.4335813 9.3953621 1.6955039 13.1303343 12.0070443 4.4855685 NA 2.6954817 8.6477448 4.1549234 11.2328691 11.5441119 10.4397622 9.2436686 2.9685147 8.6746760 9.7970269 7.8587196 6.9528763 7.9178816 -0.8895031 11.2591619 5.7398832 6.6183209 7.9762599 5.8384476 9.0240218 10.5938384 2.2804516 9.7776380 0.1104969 8.5781319 11.3658501 7.6043820 9.5998727 NA 5.3679127 7.6360474 3.7252395 2.8109572 NA 5.8918858 1.2804219 3.7252395 11.2791985 0.6954594 10.3138745 11.0028796 10.1698709 7.4211391 10.0144083 13.6409023 9.6380034 4.0647191 4.1766180 9.3796532 2.9178900 1.8109777 1.1104969 5.1105261 10.610123 8.871246 7.670859 11.888501 10.120005 11.298033 12.607255 9.190011 8.758884 11.768961 12.816375 8.378483 9.248158 9.105587 1.432478 7.569958 11.258367 11.5739231 12.5149363 6.3150970 15.1405354 9.3637830 6.4985445 8.9122349 9.0683540 10.5062480 7.4414436 5.8452366 10.9428232 9.6173299 1.5699771 10.7353219 9.5998727 8.8975475 11.7904463 10.5420241 10.5193869 7.1020481 8.6737228 9.5740508 6.9901096 9.5696455 9.4114510 9.9255093 9.3843221 11.8828410 10.1900112 8.9354851 10.9077827 9.1535538 -0.3045406 9.5014907 8.2120294 11.8610241 7.0174175 10.0852996 6.9591500 10.6034637 8.9528769 8.0559705 12.6677508 10.3065138 10.1549206 12.4998217 11.7873651 5.0878065 6.2551853 10.8070593 10.0091278 9.6761046 TCGA-D8-A140 62 0 NA 403 breast stage iib t2 n1a m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 2 1 NA 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-06 6.242351e-07 22.5 26.25 3.75 32.5 15 10.9452554 10.4886568 11.7724920 10.2818118 7.6950292 9.5462100 11.4206791 10.1514766 8.8890394 14.1825340 11.2479890 11.1359609 0.9725456 13.9614250 5.2799912 8.2468247 5.5931506 8.6813020 10.0305546 12.7198327 2.4579882 14.5761428 NA 9.7690761 11.2551879 9.4409831 0.9725456 7.8180529 9.2080985 -1.3492354 8.0169570 6.8842548 -0.3494192 6.6164195 10.1941500 10.0972011 9.9273408 10.6382541 9.4071911 11.6921228 2.5575326 11.4491065 14.3695421 10.0441163 10.1494840 12.2479890 11.3635915 3.7380977 6.1975293 9.7766939 11.2971934 NA 11.6091874 4.1100625 6.5635243 5.3230602 10.0836984 12.0669045 9.5256161 11.7371027 12.8580304 7.9882564 10.8539827 10.9138423 11.4793662 11.6416250 5.1741987 11.9380586 11.7913047 -1.3492354 10.2922349 9.5960785 3.1984470 5.7274495 10.9663504 10.3648802 10.1859101 10.8688952 1.8205670 7.9521308 12.4650169 10.9904847 10.1663346 9.6513389 1.8608000 1.1136000 0.0079175 0.0044411 0.0206230 0.0101460 -0.0336770 -0.6484900 -0.2748800 -0.6661500 -0.0106460 -0.0187650 -0.0120240 0.6786400 0.6238800 0.6547900 -0.0496950 0.6597600 -0.0200010 0.0038854 -0.0468540 -0.0794760 1.6546000 3.2492000 1.3293000 -0.0501000 -0.1023700 0.5592100 -0.0972320 0.0024969 -0.0442800 -0.0189020 -0.0036011 0.0186630 0.0101460 0.0348220 -0.0106460 -0.6224600 -0.6939200 0.0027745 -0.0077482 -0.6877000 0.0154470 0.0154470 -0.0040162 -0.1226500 -0.0120240 -0.0045695 0.6721700 0.6238800 -0.6577100 -0.6577100 -0.0145130 -0.6500600 0.5900900 -0.6316900 -0.0098185 -0.0370820 -0.0276710 -0.0410240 -0.0794760 -0.7223400 0.0141900 -0.1474700 -0.1393600 -0.0486130 0.0199230 -0.0794760 -0.0985500 0.000 0.000 0.672 0.672 0.000 0.000 -0.632 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.241 0.000 0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.658 -0.658 0.000 0.000 0.000 0.000 0.000 0.000 0.672 0.672 0.000 0.000 -0.632 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.241 0.000 0.502 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.658 -0.658 0.000 0.000 0.000 0.000 8.0408037 NA 4.7799163 11.3112992 12.5497084 7.3109163 11.7242742 9.2303467 8.6638317 2.4579882 10.3984081 12.3235429 6.4254224 4.8985615 4.8205619 8.5843255 2.6506267 11.2699377 12.0916336 11.8504604 9.1059619 3.0429595 7.3579935 9.6611628 7.8722218 6.1344510 3.9360348 NA 10.6502825 7.1504805 5.3921010 8.5039442 8.1223098 9.9742918 11.4034335 4.1741987 8.0213220 -1.3492354 7.4771835 12.0136743 8.9669164 7.4612060 NA 9.1946333 8.8926178 NA 3.3510770 -1.3492354 6.0081866 5.7487725 3.0429595 9.9446810 -1.3492354 7.2980928 10.6048310 8.8193067 5.2799912 9.1712534 14.0445614 8.1975293 3.6950250 3.5575204 13.6552502 2.8205670 NA 0.6506727 -1.3492354 14.309888 4.294488 8.533278 13.961425 10.605195 10.509393 12.719833 14.626080 9.633521 11.218828 13.762422 10.692978 9.776694 7.599002 -1.349235 9.620021 12.024451 11.2344227 12.2558827 7.4740020 13.4628110 8.9509874 6.4055227 9.0213220 8.2393493 10.5578071 7.1344510 6.4188190 11.2479890 5.5813723 -1.3492354 11.0676961 2.4579882 8.0436392 10.3314337 9.3476023 10.9711532 8.7669787 9.6099123 12.8046617 9.9062534 11.7851749 9.9273408 11.0992673 10.1248476 9.9092008 9.6833692 10.3631618 10.9736895 8.9068434 -1.3492354 8.8139700 6.4116533 11.2971934 9.5370933 11.6091874 5.7167248 10.8496813 10.0836984 7.9150775 13.1382864 10.1054481 9.3467329 12.1446152 10.5124970 0.6506727 NA 10.6506347 10.8438521 10.4474855 TCGA-D8-A141 40 0 NA 626 breast NA t1c n1 m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 3 NA NA NA 4 4 5 6 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 3.81477e-07 1.040392e-07 26.6666666666667 6.66666666666667 6.66666666666667 46.6666666666667 13.3333333333333 10.488193 9.860379 11.912644 9.549109 8.422445 9.696648 10.668262 10.190840 10.449386 11.338846 10.626939 10.478589 3.693097 12.627870 2.968736 9.936518 8.152525 8.628801 9.491608 12.557279 3.574453 12.901007 4.654619 9.828222 10.587911 7.558907 NA 10.859058 9.756346 3.030124 8.329336 7.642382 NA 5.615090 9.950977 10.040889 9.684764 10.787518 10.465451 11.460755 10.577344 10.979712 15.420420 9.013692 10.128599 11.127721 11.019759 5.375901 -0.554909 9.165410 11.192729 0.445197 11.071559 6.233067 7.999754 5.802718 10.456742 11.749517 10.551074 13.000953 12.925956 7.773841 10.970686 10.450839 11.002869 11.108056 4.837484 12.158230 10.071787 NA 10.507212 9.184102 3.607863 6.309353 11.266541 10.575736 10.141699 10.011220 2.693097 9.551074 13.299157 12.970381 10.190840 9.655228 0.51194000 0.51194000 -0.00097017 -0.00097017 -0.00484610 -0.01202400 -0.00314980 -0.00138580 0.25793000 0.25793000 0.25793000 0.00013863 0.00013863 -0.00263220 -0.00263220 -0.00263220 0.00249690 0.00249690 0.25308000 0.25902000 -0.00138580 0.00041593 0.00041593 0.00041593 0.00471900 0.00471900 0.00471900 0.00027728 -0.00097017 -0.00097017 0.00000000 -0.00097017 -0.00484610 -0.00484610 -0.01202400 -0.01202400 -0.00314980 -0.00314980 -0.00138580 0.00000000 0.00000000 0.25793000 0.25793000 0.25793000 0.25793000 0.25793000 0.00013863 0.00013863 -0.00263220 -0.00263220 -0.00263220 -0.00263220 0.00249690 0.00249690 0.00249690 0.25308000 0.25902000 0.25902000 -0.00138580 -0.26167000 0.00041593 0.00041593 0.00027728 0.00471900 0.00471900 0.00027728 0.00124810 0.00736090 0.00736090 0.000 0.000 0.000 0.000 0.000 0.000 0.253 0.259 0.000 0.009 -0.262 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.258 0.258 0.258 0.258 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.253 0.259 0.000 0.009 -0.262 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.258 0.258 0.258 0.258 0.000 0.000 7.8777074 -1.5546971 5.8114890 10.4069770 11.4818544 7.5297616 11.6670548 9.7007017 8.6686606 NA 11.7176496 11.4231610 2.8374791 1.7671039 3.8027206 8.6374585 4.5536923 12.2442448 11.3437670 10.9574122 9.6325176 4.6930910 8.0543444 10.2733021 8.6062975 5.7397860 0.7670615 -0.5549090 10.7625782 5.9370195 8.0150214 8.2922231 6.0074086 10.2429811 10.7063790 5.6643349 8.6763870 -0.5549090 8.2428273 12.7618007 8.4868246 7.4109499 NA 1.2525368 8.0962170 NA 4.7670933 -1.5546971 8.0524958 5.6259689 5.2000531 10.5219812 NA 7.4703050 10.5115912 9.7715951 6.8288702 10.6405378 14.0540846 9.4188629 6.3031469 5.5536892 10.5811955 3.8027206 NA -1.5546971 1.9045804 11.433920 5.173087 8.677586 12.627870 10.661002 10.564755 12.557279 12.027072 9.189158 10.871692 13.489133 11.217068 9.165410 10.372944 1.615087 7.503157 10.763991 11.833856 12.294962 5.200053 13.239020 8.917857 8.439519 8.812580 8.149069 10.903790 8.744374 7.881877 10.626939 6.450791 1.445144 11.323217 5.239581 7.010267 12.380054 11.291635 10.815036 8.927973 8.511255 10.625696 8.312444 11.623379 9.684764 11.022358 9.856677 10.732012 10.703143 10.593007 10.920646 9.406615 5.433851 9.878746 8.288521 11.192729 8.443756 11.071559 9.242017 11.326471 10.456742 7.321683 13.917222 9.919379 10.330862 13.073554 10.940021 5.059874 NA 10.167546 10.530306 10.008362 TCGA-D8-A142 74 0 NA 425 breast stage iib t3 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 3 4 NA 6 1 5 5 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.352509e-06 6.242351e-07 23.3333333333333 16.6666666666667 6.66666666666667 33.3333333333333 20 10.4555838 9.4041972 11.2549251 9.1520929 8.6274781 8.2446973 8.7981565 10.1955479 11.8921870 12.9821205 9.7500185 10.4179870 1.4092551 12.5414566 1.6723348 9.7491283 4.9328407 8.6666661 16.6733799 11.2225784 -1.9126729 9.7611009 6.1534385 9.9000970 11.4071634 2.7312050 -0.9126729 10.1588091 11.3099941 2.5467834 9.5323649 7.6514995 -0.9126729 6.7167070 9.3119549 10.0349871 9.5852020 9.7410909 9.3077284 10.9606020 2.0873610 8.1166371 16.0963695 7.4490529 9.5901620 10.9747612 10.9369507 3.4796703 -0.9126729 9.0298647 11.1724906 -1.9126729 10.3269487 5.9202409 6.3113523 5.5871969 10.1678346 11.4890297 9.6400193 11.6796904 12.5219784 7.6666664 10.7666103 10.7675975 10.7050472 10.7082573 4.0180911 11.3149661 9.8596648 3.9942448 10.4860938 9.3657997 5.3847233 5.7455627 11.3679759 9.6826075 10.2326455 9.9711390 5.8752517 8.2919212 12.8956105 11.5116477 9.7938461 9.2345550 1.2154000 0.6935300 0.0013868 0.0013868 0.0000000 0.3122500 0.7137700 0.1064300 -0.4179400 -0.0324500 1.3954000 2.1310000 -0.3981900 1.8547000 0.3539800 0.3539800 -0.1866000 -0.1866000 -0.1546400 -0.3937500 -0.4410200 0.0425900 0.0425900 0.3569900 -0.0521260 0.2006000 0.1953900 0.6667800 -0.2150300 -0.1929300 -0.1067300 0.0013868 -0.2638600 -0.0642250 -0.4318100 -0.4318100 0.7137700 0.1064300 0.1064300 0.6360900 -0.0175290 -0.4269000 -0.0597410 -0.0597410 -0.0597410 -0.0597410 -0.3883900 -0.4534000 -0.4378900 0.3539800 0.4628000 0.4628000 -0.1866000 -0.1866000 -0.1866000 -0.1351200 -0.3937500 -0.4091500 -0.4363700 -0.2111900 0.0425900 0.0425900 -0.3344500 -0.0521260 0.2006000 0.2409300 0.0161460 0.0781940 0.2510500 1.972 -0.398 -0.438 -0.438 -0.187 -0.187 -0.155 -0.394 -0.436 0.368 0.368 0.000 0.314 -0.399 -0.399 0.000 0.195 -0.193 0.501 0.667 0.667 0.000 0.251 -0.107 -0.107 0.000 0.000 -0.186 0.000 0.315 -0.117 0.675 0.106 0.000 0.000 0.403 0.821 0.000 0.000 0.136 0.136 1.972 -0.398 -0.438 -0.438 -0.187 -0.187 -0.155 -0.394 -0.436 0.368 0.368 0.000 0.314 -0.399 -0.399 0.000 0.195 -0.193 0.501 0.667 0.667 0.000 0.251 -0.107 -0.107 0.000 0.000 -0.186 0.000 0.315 -0.117 0.675 0.106 0.000 0.000 0.403 0.821 0.000 0.000 0.136 0.136 6.50097728 0.08732705 5.69467965 10.04481498 11.84765427 5.42577483 10.86563268 9.82643027 8.75262384 -1.91267295 11.93323218 12.00551178 3.29680978 NA 3.96999772 9.36696079 4.01809110 10.69975792 11.59749616 10.82142466 9.20888373 -0.91267295 8.21663335 9.85512075 7.72034551 10.98821694 5.44490224 -0.91267295 10.53365805 4.95771498 6.66477863 8.70665314 8.02251540 10.09319570 10.94163418 3.37275713 9.00023949 NA 8.41040471 12.85206626 8.63617217 7.84390661 -1.91267295 -0.91267295 7.77560040 1.08732705 4.67231218 -0.32771045 5.28702157 4.17587585 3.54678336 10.77231787 6.16416478 10.35852132 10.84993978 10.01067761 5.42720053 10.46048713 11.92033901 9.74109093 2.33528315 4.29680244 9.64289792 3.92023612 3.04154088 NA 3.25728223 11.0746141 7.0646296 8.3329030 12.5414566 9.2821071 10.6588658 11.2225784 10.4101233 9.3361968 10.2922269 13.2218166 9.5313296 9.0298647 8.6956048 -0.3277104 7.9344074 11.0648090 11.0808193 12.0681145 5.7239735 14.4475448 8.6816748 5.9515365 9.4623896 8.8716007 9.9618398 6.6534040 5.9202409 9.7500185 6.9972427 7.3564766 9.9623315 9.2949747 8.2199782 13.0891981 10.4030658 10.1259263 7.8152706 8.4978016 9.1594826 8.7410908 11.1135312 9.5852020 10.0563768 10.1283247 11.6197061 11.0095629 9.9657843 10.4553109 9.5467818 -0.9126729 9.9885866 7.8087911 11.1724906 9.4574925 10.3269487 8.4742904 10.7992730 10.1678346 6.8603570 13.6527498 9.9745708 10.2706754 12.4987287 10.9359730 2.5467834 -1.9126729 9.6572057 9.3750625 9.7203453 TCGA-D8-A143 51 0 NA 431 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 4 NA 1 1 5 6 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 2.080784e-07 17.6470588235294 8.82352941176471 2.94117647058824 47.0588235294118 23.5294117647059 8.9693477 9.5827014 12.0913015 9.5459385 8.8525997 9.2122809 9.7805862 11.5769963 10.5637160 13.9696880 11.7047882 11.2244209 -0.4023973 11.7754578 2.9898838 9.5044617 5.0405155 9.2030506 7.0363627 11.7257266 NA 8.4710151 7.8431240 10.5799587 10.7044612 4.0238320 2.2980131 10.7993887 12.2698860 0.1825652 9.6309942 9.5495843 -1.4023973 6.2049017 10.1974839 10.7336010 10.1716916 9.1230919 10.0631375 10.5393524 13.6647954 9.8655282 14.5939122 7.2458569 9.7674961 11.5098991 11.5452081 4.3524619 4.5517682 9.3126752 11.9424218 NA 11.1923622 3.9551268 6.0813865 3.5517621 7.7599627 12.4222316 9.5890931 10.4633044 12.6394869 8.8898927 10.9096032 10.4092549 11.0227870 11.2934519 4.2414284 11.5218269 8.6185511 NA 10.2535490 9.5201555 3.7231435 4.6636577 8.5919247 10.9655319 9.7612208 8.5238673 -0.4023973 8.6797201 13.0276316 11.6044231 10.5812773 10.6538702 1.5690000 1.5690000 -0.0328600 1.3063000 0.0041632 -0.0698670 1.2793000 0.6437800 -0.7293200 0.2540200 0.2593400 -0.0657000 -0.0404870 1.1795000 -0.0989450 0.0000000 1.4065000 -0.3638600 3.6569000 0.3551200 -0.4097000 0.5380100 0.5380100 0.5380100 0.2160600 0.4017700 0.3325400 0.7294300 0.5491200 0.5491200 -0.1522100 -0.0552070 -0.1634700 -0.0806740 -0.6808600 -0.0246610 1.2793000 0.6437800 0.6218000 0.3352900 -0.1074700 -0.7293200 -0.6847800 -0.6847800 -0.1568500 -0.1611500 -0.0404870 -0.0404870 -0.3670300 -0.0989450 -0.7359100 -0.0590000 1.4065000 -0.3638600 -0.3638600 -0.6981200 0.3551200 0.2862800 -0.0433310 0.8812600 0.5380100 0.5380100 -0.0275350 0.3562600 0.3325400 0.7294300 0.0077783 -0.1132500 -0.1132500 0.000 0.000 0.000 0.000 1.043 -0.364 -0.686 0.355 0.000 0.881 0.881 0.538 0.538 0.000 0.000 0.333 0.333 0.549 1.569 0.729 0.729 0.000 -0.113 1.193 0.000 0.000 1.306 0.000 0.000 0.000 0.000 0.644 0.644 0.335 0.335 -0.475 0.254 -0.685 -0.157 0.125 0.125 0.000 0.000 0.000 0.000 1.043 -0.364 -0.686 0.355 0.000 0.881 0.881 0.538 0.538 0.000 0.000 0.333 0.333 0.549 1.569 0.729 0.729 0.000 -0.113 1.193 0.000 0.000 1.306 0.000 0.000 0.000 0.000 0.644 0.644 0.335 0.335 -0.475 0.254 -0.685 -0.157 0.125 0.125 7.2269275 NA 7.3854733 10.5141970 12.4563292 4.8333000 11.0580270 8.8015431 8.3550947 0.5976027 10.5744932 11.7274450 2.1825334 NA 2.1825334 9.6582670 4.0894219 9.7818267 10.8124973 11.2276107 9.1844110 4.2122814 8.4817417 9.7184570 7.5312621 10.1063563 5.1053638 -1.4023973 10.4221322 3.2414284 6.4049253 8.6969189 9.6330575 9.4747708 10.6616402 2.7675065 9.7479531 3.6419621 8.3424050 12.2354413 6.1289532 7.5890931 0.1825652 4.5748523 8.3674091 1.7674853 3.5975669 NA 5.4304626 2.6884266 4.1521591 10.8003072 5.8829731 9.7294280 10.9715238 9.5268296 5.7972439 10.4825048 12.2534372 8.0834006 4.1521591 3.5975669 10.1098177 -0.4023973 3.3524619 2.0569996 5.6850347 8.970131 10.347859 8.464850 11.775458 10.268019 12.175826 11.725727 7.245030 9.453218 11.591571 12.786392 9.316104 9.312675 8.369061 1.182565 8.298011 11.162435 11.3970551 12.8022951 6.4984376 14.9179478 9.1250482 5.9551221 8.9682584 10.0389592 10.3687057 6.0651759 6.8454988 11.7047882 8.6268585 1.1825652 10.3665824 11.6140313 10.3989844 13.1384257 9.3968528 10.5915710 8.5525527 8.8454985 8.8251871 8.3624427 9.3414379 10.1716916 9.7587031 9.9666231 11.7195902 10.8012250 7.8573142 10.6309941 8.2752907 10.1956237 8.3816005 7.0021163 11.9424218 8.8251871 11.1923622 4.8263909 10.1946926 7.7599627 8.2596162 13.7432247 10.5691147 10.1540772 13.0420684 11.7473182 4.0894219 0.9195308 10.6220182 9.8719493 9.3169601 TCGA-D8-A145 80 0 NA 410 breast stage iia t1c n1a m0 female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 3 NA 4 3 3 4 3 4 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 21.7391304347826 17.3913043478261 4.34782608695652 21.7391304347826 34.7826086956522 11.0133153 10.6152652 12.2512761 9.2530663 8.1624991 9.5355297 11.3628071 9.6745300 9.9274361 13.7317128 10.4717737 10.7410126 1.0127832 12.7996749 3.6908193 9.9154284 6.1337669 9.0723668 9.5141911 12.9467376 2.0127474 13.4900042 6.4787259 9.1040182 10.9069634 6.6333382 -1.3090019 9.4246866 9.1044517 2.1502672 8.7716413 7.3310683 NA 6.3843106 10.7135384 10.0820675 9.5581025 11.4882827 10.3454598 12.2842149 10.7983679 11.0696606 14.7320124 8.4286118 11.3514883 11.7240747 11.5173723 6.6156370 6.0571470 9.4457114 11.8970751 NA 11.1548590 7.3667812 6.0483757 4.6450214 10.1002147 11.8027745 10.2372360 11.7357302 13.0943019 7.4819867 11.0104959 10.7381352 11.5931989 11.8218769 5.6096870 11.4965677 11.7020511 0.6908193 10.3786369 9.1866788 3.9177182 5.4322913 10.5213391 9.9739121 10.2925946 9.7173472 3.6908193 8.1461511 13.2456525 11.9402336 10.2020823 9.5977144 0.08739000 0.08739000 0.00055459 0.00721300 0.01237600 0.00847430 -0.17967000 -0.17967000 -0.19950000 -0.19950000 -0.19950000 -0.04429000 -0.04429000 -0.19887000 -0.19887000 -0.19887000 0.00013863 0.00013863 -0.36658000 0.02927200 -0.00968060 -0.21540000 -0.21540000 -0.21540000 0.15188000 0.15188000 0.15188000 0.43243000 0.08739000 0.08739000 0.00694350 -0.41355000 0.01237600 0.01237600 0.00847430 0.00847430 -0.17967000 -0.17967000 -0.18446000 0.00000000 0.00000000 -0.19950000 -0.20386000 -0.20386000 -0.20386000 -0.23403000 -0.04088800 -0.09063800 -0.19887000 -0.19887000 -0.19922000 -0.19922000 0.00013863 0.00013863 0.00013863 -0.36658000 0.09072000 0.09072000 -0.00968060 -0.21280000 -0.21540000 -0.21540000 0.00416320 0.15188000 0.15188000 0.43243000 -0.21231000 -0.20784000 -0.20784000 0.000 0.000 -0.199 -0.199 0.000 0.000 -0.367 0.000 0.000 0.047 -0.213 -0.215 -0.215 0.000 0.000 0.152 0.152 0.000 0.000 0.432 0.432 -0.212 -0.208 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.180 -0.180 0.000 0.000 -0.199 -0.199 -0.204 -0.204 0.000 0.000 0.000 0.000 -0.199 -0.199 0.000 0.000 -0.367 0.000 0.000 0.047 -0.213 -0.215 -0.215 0.000 0.000 0.152 0.152 0.000 0.000 0.432 0.432 -0.212 -0.208 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.180 -0.180 0.000 0.000 -0.199 -0.199 -0.204 -0.204 0.000 0.000 8.1584294 8.8481707 5.4721823 10.6780878 11.1060374 7.2672324 11.1996090 9.9755611 8.7645907 4.9762261 11.0508478 10.8956059 6.6096870 4.6681021 4.5977159 8.6007169 3.9387469 10.2921303 11.2616282 10.5335669 8.8582418 2.5977219 8.2888762 9.9535059 7.7888560 7.1866788 3.5488065 NA 11.6176757 8.1926612 9.5984657 8.3400802 7.6362679 10.7665369 10.4093567 4.2757893 8.4606615 0.2758414 8.5565570 12.8822686 8.4754586 7.5611886 NA 3.9387469 7.8657494 0.6908193 4.2757893 1.8607642 5.8405715 6.1680162 5.0306760 10.4042103 0.2758414 9.5542358 10.5526862 9.6551647 5.5734654 10.0256558 11.5497761 8.5931988 3.3346827 3.3346827 10.8616877 -1.3090019 NA 4.2757893 0.6908193 13.490510 5.182676 8.855731 12.799675 10.113940 10.324273 12.946738 13.554284 8.978536 11.156900 12.967748 11.001153 9.445711 7.233855 3.976226 7.794112 11.684116 11.2547350 12.1198382 7.2907368 14.0422103 9.1604657 6.9148252 9.1876777 8.3201805 10.8590917 7.1866788 9.4507121 10.4717737 6.9991623 2.3912728 11.4348167 6.7020508 7.1316934 12.7302570 10.2939864 10.7304284 10.1023348 8.1806715 12.7300856 9.6267255 11.3814089 9.5581025 10.3342291 9.3490352 11.3727211 10.0138786 10.6555257 10.6537198 9.4965676 0.6908193 9.3734409 6.8801541 11.8970751 9.3981830 11.1548590 7.3238186 10.8917224 10.1002147 7.9268380 13.9320994 10.1766531 10.0356745 12.6071698 10.9121088 3.2757818 -1.3090019 10.8168829 10.8620006 9.9440804 TCGA-D8-A146 57 0 NA 643 breast stage iia t2 n0 mx female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 2 NA 2 2 4 4 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 25.9259259259259 22.2222222222222 0 29.6296296296296 22.2222222222222 10.82424334 9.91880377 11.79201824 9.96988724 8.42432840 8.99174291 10.66602645 9.95029343 9.66412867 13.48601518 11.02785874 10.75519897 1.83187724 12.10950758 4.29130149 9.82735604 7.19293781 8.54611697 9.82509298 13.05611437 2.75787666 13.42007077 6.94457152 9.04375980 10.70254440 6.69976815 -0.49005085 9.24041356 11.58391753 2.75787666 7.81600507 7.59475156 0.09491165 5.44067984 10.29621304 10.48758111 9.57535942 11.17283426 10.35032795 12.19063254 3.67986289 11.71084198 14.75114451 9.20194844 9.33410654 11.18015700 10.89256741 4.57603229 5.21038497 9.59607959 11.33529974 -1.49005085 11.20864802 6.68985265 6.29784620 5.15380128 10.32131809 11.69031879 10.31326728 12.52439979 12.87735813 7.79303164 10.74535928 10.53363187 11.36227782 11.06716771 5.53231072 11.99464043 11.29068819 NA 10.38454062 9.02662829 3.90603434 5.47572695 10.22676283 10.10706482 10.46922085 10.03448508 4.36792315 9.32452576 13.64099647 11.93673226 9.90172402 9.61781437 0.6459800 0.6459800 0.0539480 0.0539480 -0.0210980 0.2766300 0.0423070 0.0423070 0.0441480 0.0441480 -0.4977800 -0.0681190 -0.0202240 -0.0297210 -0.0297210 -0.0297210 0.0075000 0.0075000 -0.3040400 0.2648300 -0.2099500 -0.5072200 -0.5072200 0.0617940 0.0049969 0.0049969 0.0049969 0.3029800 -0.2019900 -0.2019900 -0.1794200 0.0539480 -0.0210980 -0.0210980 -0.2913000 -0.2913000 0.0423070 0.0423070 0.0423070 0.2892900 0.2823200 0.0441480 0.1601000 0.1601000 0.1617500 0.1697100 -0.0202240 -0.0131270 0.0066653 -0.0297210 -0.0297210 -0.0297210 0.0075000 0.0075000 0.0075000 -0.3040400 0.2648300 0.2648300 -0.2099500 -0.3036100 -0.5072200 -0.5072200 -0.2517600 0.0049969 0.0049969 0.3029800 0.0000000 -0.2425300 -0.2425300 0.000 0.000 0.000 0.000 0.000 0.000 -0.304 0.265 -0.210 0.249 -0.292 -0.507 0.000 -0.256 -0.256 0.000 0.000 -0.202 0.444 0.303 0.303 0.000 -0.243 -0.179 -0.179 0.000 0.000 0.000 0.000 0.235 0.235 0.000 0.000 0.289 0.289 0.000 0.000 0.162 0.162 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.304 0.265 -0.210 0.249 -0.292 -0.507 0.000 -0.256 -0.256 0.000 0.000 -0.202 0.444 0.303 0.303 0.000 -0.243 -0.179 -0.179 0.000 0.000 0.000 0.000 0.235 0.235 0.000 0.000 0.289 0.289 0.000 0.000 0.162 0.162 0.000 0.000 8.2016868 NA 5.8045647 10.5706393 11.1181982 6.9468630 11.5847538 9.5958406 8.5393961 4.6184677 11.5239638 11.4448855 2.7578767 5.9108238 3.9022569 7.9652706 4.3172968 10.6842449 11.3990670 10.7970786 9.2438062 6.4757269 8.0393737 10.2660827 6.9022605 7.4495226 4.3428321 -1.4900509 11.0040489 5.7096160 9.4145781 8.1752791 6.0797984 10.3226782 10.4175851 4.3428321 8.2259054 -1.4900509 8.1735013 12.0623723 8.8958058 7.5652255 NA 3.0949116 8.0157551 1.5099491 4.3428321 -0.4900509 5.5760323 5.9868114 4.4406798 9.9341097 0.5099491 8.5665812 10.5246613 9.7369576 4.8137248 10.0995945 11.7943337 8.2814331 2.9022666 4.0017932 12.4654117 3.0949116 -1.4900509 0.5099491 2.5974120 13.324526 5.521170 8.646934 12.109508 10.182811 10.654602 13.056114 11.947565 8.873717 11.018729 13.329574 9.094906 9.596080 8.878450 NA 7.349147 11.442712 11.3160902 12.5865920 7.2714948 13.7830094 8.8652944 6.4108109 9.0374204 7.4347558 10.6970851 7.2344573 8.8784498 11.0278587 7.0491025 2.5099491 11.3297233 6.1609948 6.4768806 11.7586122 10.4172096 11.3436241 8.5211705 8.5474903 11.7074672 6.9108226 12.0283789 9.5753594 10.5113516 9.6256373 11.3189076 10.0869000 10.4760883 10.6801814 9.4957853 0.5099491 9.6298118 8.4573173 11.3352997 7.5071231 11.2086480 8.5597920 10.8710153 10.3213181 7.1823685 13.1133959 9.9314823 10.2585556 12.3228226 10.4648666 5.6798685 0.8318772 10.5824110 11.0654911 9.8647438 TCGA-D8-A147 45 0 NA 584 breast NA t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.913097e-06 8.323135e-07 4.58715596330275 36.697247706422 5.5045871559633 27.5229357798165 25.6880733944954 9.3970527 10.0818380 11.9222989 10.0141921 8.7278538 9.8503377 9.8916785 10.7175446 11.0876310 13.0604710 11.5966567 10.7860168 2.6719953 12.0319812 3.1789536 9.9387870 6.7903954 9.4268880 12.9226106 -0.5758304 -0.5758304 6.9824940 10.9608058 8.8023677 10.9932165 6.4901626 -0.5758304 9.7410275 11.7302771 4.7460010 8.8345245 9.1070674 0.4240621 2.5939991 9.7341177 10.6958278 9.1494392 9.1305690 10.2498268 11.6362654 0.4240621 8.6237454 14.7409555 8.7517154 10.1485868 11.1735234 11.1219093 5.3309635 -0.5758304 9.7140918 10.9444461 -0.5758304 11.7931250 5.8587022 7.1070674 8.2882589 8.8034515 12.6042930 9.9598343 12.0049204 13.8267187 7.4099153 10.8954942 11.0317315 12.2370524 11.7308467 5.2414398 11.9845252 9.8377009 -1.5760454 10.8188036 10.2140140 4.9955976 6.1655402 11.7510641 10.5864642 11.2003003 10.4533602 8.4834176 5.8670167 12.8568106 11.5572152 10.6669493 9.8623451 1.328200 2.938100 -0.377020 0.042229 -0.442380 -0.404240 0.026014 0.882350 0.612520 0.612520 0.612520 -0.020351 1.088200 0.107810 -0.463930 0.018252 0.522310 -0.067532 0.033612 -0.067130 -0.080615 -0.461400 0.436730 -0.430240 0.328250 2.639100 -0.106120 0.502110 -0.041778 0.179420 1.434400 -0.377020 -0.495330 -0.201560 -0.866370 -0.421290 -0.424790 0.882350 -0.371950 -0.239310 -0.042321 0.421070 0.000000 0.000000 0.000000 -0.503240 1.088200 -0.224350 0.107810 -0.463930 0.807420 -0.848080 0.522310 -0.067532 -0.067532 -0.864490 -0.428500 -0.441190 0.388400 0.020545 -0.401580 0.368780 -0.063912 -0.485920 -0.535970 0.502110 0.919550 0.434190 -0.035388 0.652 0.652 0.000 0.000 0.522 0.000 0.000 0.000 0.000 0.000 0.000 -0.402 -0.402 0.000 0.000 0.311 0.897 0.000 0.000 0.502 0.502 0.449 0.000 0.403 0.403 0.092 0.469 -0.367 0.000 -0.421 -0.421 0.000 0.000 -0.162 0.000 0.000 0.613 0.000 0.000 -0.213 -0.213 0.652 0.652 0.000 0.000 0.522 0.000 0.000 0.000 0.000 0.000 0.000 -0.402 -0.402 0.000 0.000 0.311 0.897 0.000 0.000 0.502 0.502 0.449 0.000 0.403 0.403 0.092 0.469 -0.367 0.000 -0.421 -0.421 0.000 0.000 -0.162 0.000 0.000 0.613 0.000 0.000 -0.213 -0.213 7.750502667 NA 5.532597491 10.790668363 11.718837265 6.148519290 10.184377130 9.953435204 8.094640926 NA 10.487468060 10.916880032 3.378275779 NA 4.231424728 9.801825710 4.009033587 9.722708332 11.613588698 11.467100264 9.436697594 2.947628757 9.571913777 10.377178097 6.506222673 4.151996782 1.231432408 1.424062125 10.971208491 4.709472616 6.312815809 8.009035267 10.275431629 10.445368749 11.179169146 3.282054244 9.242655139 2.947628757 9.402783348 12.344239697 7.757227978 5.799113216 0.009060468 5.947635769 8.046124861 3.511531292 2.424062125 0.009060468 6.231428568 1.028144768 7.812090003 11.070631702 4.816389789 10.381900552 11.635657092 10.033713439 4.915927169 9.607087995 14.411803284 8.743745184 3.978662416 4.178961575 10.186870187 0.745968715 3.978662416 2.671995298 5.746000973 9.5597822 9.9743387 8.0570684 12.0319812 10.6655438 12.2372529 -0.5758304 10.8924425 8.8012835 11.8882358 13.6518769 11.4068883 9.7140918 8.8886188 1.7460117 7.5352085 11.4648764 10.7474092 11.1203885 3.7816220 13.6378952 9.0183974 6.9199276 8.9476349 10.0543400 10.1752194 7.6672471 4.0964980 11.5966567 9.7054235 0.4240621 10.1781254 8.2442520 9.6254373 13.3489318 10.2561718 10.1485868 8.0534296 8.2249726 8.9948775 6.8419253 9.7066808 9.1494392 9.7594633 9.2990544 11.9286437 11.0511508 11.8855524 10.4159491 10.3680528 -0.5758304 9.8656270 7.1137567 10.9444461 5.9554546 11.7931250 6.7728015 9.8146020 8.8034515 8.6920299 14.4385076 10.1566643 10.9867924 13.3524525 10.6347443 0.7459687 1.4240621 11.1617429 10.4074229 9.4443585 TCGA-D8-A1J8 77 0 NA 431 breast stage iib t2 n1a m0 female 2010 NA no infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 2 2 6 1 2 2 5 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 4 0 4 0 0 0 0 0 0 4 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 4 0 0 0 0 4 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 4 6 0 6 0 0 1.678499e-05 5.895554e-06 14.6969696969697 56.2121212121212 1.21212121212121 17.1212121212121 10.7575757575758 10.7498644 10.8083266 11.3817106 10.3529934 8.0829931 10.1114908 9.7979324 10.8005933 8.8562223 13.9269109 11.2431701 10.6285621 NA 10.4804365 4.4354886 8.0234921 6.1317088 8.7845534 9.4963902 13.4113914 NA 13.3765181 5.6630884 9.4008350 10.6882144 4.9518861 NA 10.9379095 10.7067748 -0.8682788 7.1761023 8.4648639 NA 3.8041362 10.3710085 11.8155802 10.0753220 11.6651597 11.3376543 11.9853103 -1.8682788 11.2003187 13.5908197 8.3186151 8.7728569 10.9951203 11.0552216 3.8596317 3.6235626 9.0066896 11.6746193 NA 11.1832572 6.0624456 8.1910528 4.8459516 11.0496398 11.9202228 9.9846279 12.1223442 13.5017146 6.9865770 11.1010948 10.7487166 12.3361266 10.6594297 4.9261228 11.7761280 10.1285348 -0.8682788 9.5834347 9.1324126 3.2246732 5.4445909 10.7615202 10.4046296 9.4654227 10.2326991 2.1317212 7.9989869 13.0034211 12.4454417 10.2770037 8.5175706 0.38122 1.11930 -0.39708 -0.39708 -0.39908 0.40361 0.35692 0.34866 -0.22207 -0.22207 -0.22207 -0.39553 -0.39553 -0.27004 -0.27004 -0.27004 0.39263 0.37718 -0.39930 0.39330 -0.38571 -0.39118 -0.39118 -0.39118 0.37314 0.37314 0.37314 0.42536 -0.38638 -0.38638 0.34648 -0.39708 0.41329 -0.40506 0.40361 0.38287 0.35692 0.34866 0.34876 0.38634 0.38634 -0.22207 0.39363 0.39363 0.39363 0.39363 -0.39553 -0.39553 -0.26829 -0.27004 -0.27004 -0.26889 0.39263 0.37718 0.37718 -0.40451 0.39330 0.40361 -0.37909 -0.37932 -0.39118 -0.39118 -0.38392 0.37314 0.37314 0.42536 -0.39241 -0.38302 -0.38302 -0.396 -0.396 -0.270 -0.270 0.393 0.393 -0.399 0.393 -0.386 0.416 -0.379 -0.391 -0.391 -0.384 -0.384 0.373 0.373 0.014 0.400 0.425 0.425 -0.392 -0.383 0.346 0.346 -0.397 -0.397 0.413 0.014 0.404 0.404 0.357 0.357 0.386 0.386 -0.222 -0.222 0.394 0.394 0.000 0.000 -0.396 -0.396 -0.270 -0.270 0.393 0.393 -0.399 0.393 -0.386 0.416 -0.379 -0.391 -0.391 -0.384 -0.384 0.373 0.373 0.014 0.400 0.425 0.425 -0.392 -0.383 0.346 0.346 -0.397 -0.397 0.413 0.014 0.404 0.404 0.357 0.357 0.386 0.386 -0.222 -0.222 0.394 0.394 0.000 0.000 7.9645985 6.6275631 5.0859047 8.6591853 10.1068398 5.4993421 10.2454505 8.6787955 8.4228788 -1.8682788 13.1230973 11.2131918 0.4536493 2.7166617 1.9390761 8.3041359 2.9390573 11.1170166 11.2969294 10.9334167 9.4947480 4.5067479 8.3016334 8.9685476 6.5993133 4.7755668 6.2244648 NA 11.2961439 7.6054143 9.8638757 7.3605267 5.1651321 8.2434311 10.6305575 3.7166727 7.4603830 NA 8.7899199 11.6933543 7.5663365 6.7166713 -1.8682788 1.9390761 9.0631845 NA 0.1317212 NA 7.4445909 5.9979991 0.9390761 9.7899198 NA 7.3914515 10.8897233 10.4414689 5.5663372 10.2493515 13.5825652 9.0786146 6.9614312 5.0859047 10.5034850 2.1317212 NA 3.3411603 -0.2833163 12.3863576 7.3289253 8.2558297 10.4804365 10.1852406 11.5167618 13.4113914 10.6528180 9.4217272 11.2336840 13.4674476 8.4171107 9.0066896 9.3760722 0.9390761 7.3041359 11.4104482 10.6613829 11.4910461 7.5089190 13.1924878 9.8147029 7.5389757 8.9974417 9.2928402 10.7948951 5.5410997 7.9293697 11.2431701 5.8041336 1.7166837 11.8237789 7.3557096 7.9762886 10.4124791 11.4155202 11.6933543 7.7610652 6.0624456 11.9768063 7.0112921 12.5403234 10.0753220 11.2063516 9.1394365 11.9018560 8.7961555 11.0784319 11.0646612 9.5229520 2.0386118 8.1529799 10.4270612 11.6746193 6.1924033 11.1832572 7.9064956 10.1940919 11.0496398 7.3435970 12.5740687 10.4477070 10.9628176 12.1046881 9.9826765 2.4536493 -0.8682788 10.6513446 11.0492669 10.2171808 TCGA-D8-A1J9 48 0 NA 532 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 2 3 1 2 2 5 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.84945e-06 1.456549e-06 8.28025477707006 73.8853503184713 3.82165605095541 10.1910828025478 3.82165605095541 9.89579125 10.17288925 11.72321399 9.79061241 8.38421519 9.88585116 10.67969183 9.72878547 10.04044535 14.24857087 10.27116010 10.58112571 0.87302570 17.47726803 5.69502780 8.44179759 4.62026382 8.64404481 6.69138062 13.38721283 -0.93428984 12.40399078 6.76263982 9.14502371 12.11756087 5.73809767 0.65067266 8.89777105 11.56327460 2.65062672 8.09357813 7.49612516 -0.93428984 4.97256400 9.42377396 11.07777293 9.29208439 11.22270327 9.76220512 11.27497328 NA 9.84374930 14.73545695 7.58428608 9.42706766 10.90369427 11.59021393 4.52510419 6.05435795 9.69912162 12.35741851 0.06571016 11.41661140 5.59705437 7.10733113 4.70952776 10.65368409 11.58530848 9.77604821 12.18209740 12.94036547 6.80038225 11.15031456 10.38022435 11.47413464 11.04098282 4.87302570 12.32232320 8.41440026 -1.93456555 9.95669646 9.62265715 2.53945663 6.47930009 10.32276540 9.74647133 9.64310110 10.05186976 4.94831583 11.46174177 12.62868970 12.38456803 9.17484980 9.20650208 0.6712200 0.6712200 -0.5444600 0.6282500 -0.0941040 0.1355400 0.0467000 -0.3155200 -0.4980900 -0.7837800 0.5027300 0.0362290 -0.2314100 -0.5963300 0.5647200 0.6178800 0.0461330 0.0461330 -0.2495800 0.0570830 0.0852210 -0.6140300 3.6569000 -0.0677260 0.0000000 0.0000000 0.0000000 0.0539480 0.0308730 0.0308730 0.0757030 -0.5769400 0.0134920 -0.0941040 0.0048579 -0.0013858 0.0467000 -0.3155200 -0.0076101 -0.4896300 -0.0514510 -0.7983600 -0.7107800 -0.7107800 -0.8542400 -0.8921200 -0.2314100 -0.2314100 -0.6155600 0.5647200 -0.6124900 -0.6124900 0.0461330 0.0461330 0.0359470 -0.2495800 0.0570830 0.0570830 -0.6047700 -0.6071900 -0.6252200 -0.5991700 -0.9848500 -0.0147780 0.0000000 -0.6565900 -0.0857220 0.1481600 -0.0744120 0.000 -0.231 0.000 0.000 0.000 0.000 -0.250 0.000 -0.274 0.662 -0.591 -0.584 -0.584 -0.257 -0.257 0.000 0.000 0.000 0.671 0.000 0.000 0.000 0.000 0.000 0.000 -0.577 -0.577 0.000 0.000 0.131 0.000 0.000 0.000 -0.438 0.000 -0.784 -0.281 0.000 0.000 -0.488 -0.488 0.000 -0.231 0.000 0.000 0.000 0.000 -0.250 0.000 -0.274 0.662 -0.591 -0.584 -0.584 -0.257 -0.257 0.000 0.000 0.000 0.671 0.000 0.000 0.000 0.000 0.000 0.000 -0.577 -0.577 0.000 0.000 0.131 0.000 0.000 0.000 -0.438 0.000 -0.784 -0.281 0.000 0.000 -0.488 -0.488 8.5734669 2.5892362 4.3694525 10.4207480 11.2109676 4.8917108 11.3695957 9.0824179 8.5290537 NA 12.3774915 11.6780766 4.1531325 2.5250917 3.2751263 8.0443826 6.0023110 10.6333907 12.0814357 10.8894375 11.8506137 2.8205670 7.3464428 9.7389813 5.8858501 9.0436677 5.7867715 -0.9342898 10.5963224 3.6202580 7.7850607 8.7247761 6.0543579 9.3688823 10.1660060 3.7661075 8.2787765 NA 7.8305437 12.2850677 6.6009476 7.0111165 NA 7.2604294 8.1086996 4.4579882 2.8205670 5.9048766 3.8730257 6.5905272 1.2356045 10.1692879 -1.9345656 8.7591592 10.7447124 9.9774386 4.0429507 9.2659579 13.7274781 8.7867715 1.7661287 3.6202580 10.1613989 4.9725640 NA 0.6506727 0.8730257 12.45895877 6.73809767 8.74162911 17.47726803 9.76611194 10.77798429 13.38721283 10.39994554 9.74902216 10.82680785 12.85474730 8.43308714 9.69912162 9.21985751 0.06571016 7.70410837 11.24573677 12.45207364 12.88435424 6.14782156 14.34617080 9.31537829 5.58137234 8.27024346 8.14550373 12.40755099 6.34644282 6.66186216 10.27116010 6.59705437 0.06571016 11.30108814 6.51275468 7.21486015 11.65192561 9.34005036 11.34716762 7.01695645 7.40329414 10.04581180 4.69503058 10.78395889 9.29208439 10.39854790 10.09840679 11.42184903 9.32894145 10.97312627 11.73677093 9.19237666 4.49193645 8.50157170 7.61820708 12.35741851 3.70953327 11.41661140 8.83054373 11.78202119 10.65368409 7.51068743 13.32589346 10.30973872 9.89539503 12.34738496 10.80587460 -0.34941924 2.84651337 10.74339185 10.70523900 10.53683933 TCGA-D8-A1JA 60 0 NA 502 breast NA t4b nx m0 female 2010 NA yes infiltrating ductal carcinoma NA white not hispanic or latino NA NA 2 2 3 1 2 2 2 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 7 0 5 0 0 1 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4 0 0 0 0 0 0 1 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.281926e-05 7.421462e-06 7.32807215332582 82.2998872604284 2.70574971815107 6.65163472378805 1.01465614430665 10.2976814 10.9087943 11.1445395 10.3274857 7.7648537 10.1257758 7.4687446 10.5600947 9.3893930 14.8536105 10.1067650 10.8545342 -0.8844340 15.8847767 4.2241252 8.3347658 5.8704856 9.5392387 6.6967979 13.3178361 -0.8844340 11.6528158 3.4731505 8.6489274 10.8045033 8.2030602 -0.2993827 9.5338454 12.7896242 1.4375474 7.4993014 8.9269723 -0.8844340 4.0697967 10.9655889 11.1500525 10.1800034 10.9595185 12.3461433 11.5342407 4.1155993 10.9158907 13.6488055 6.5952963 9.8688142 10.6044418 12.3787199 3.7594541 6.4056163 10.0012938 11.7702335 -0.8844340 12.0685206 2.6391627 6.3299165 4.8837821 10.7014989 11.4963291 9.4982215 11.9198293 13.5179101 7.1708795 11.0174071 9.4172308 12.0590280 10.7966162 4.4010024 12.7787664 11.0160869 0.4375474 9.5719519 9.3256598 1.9239858 4.7449522 10.1341453 9.8738207 9.0005311 10.5811639 1.7005729 8.4009998 12.8710588 11.8260810 9.6892446 9.7919954 0.68682000 0.72830000 0.00624810 0.00763920 0.96225000 0.02693500 0.00917050 0.00917050 0.01070300 0.01070300 0.01070300 -0.00083160 -0.00083160 0.00848340 -0.00097017 -0.00097017 0.00000000 -0.00567570 -0.74273000 -0.00180140 0.70064000 -0.01807800 3.65690000 -0.02137300 -0.03827300 -0.03827300 -0.03827300 -0.00774820 -0.80053000 -0.00664320 -0.75952000 0.00624810 -0.78041000 -0.74133000 -0.76954000 0.01279500 0.02834100 0.00917050 0.00917050 0.00833510 -0.76740000 0.01070300 -0.75892000 3.28650000 -0.00519940 0.01950300 -0.00257230 0.04429000 0.00444110 -0.00097017 -0.78623000 0.04584900 0.00000000 -0.00567570 0.00263570 -0.74273000 -0.00180140 0.01712400 -0.01340200 0.00930980 -0.78732000 -0.78387000 -0.76252000 -0.03827300 -0.03827300 -0.00774820 -0.00097017 -0.03163200 0.00722170 0.000 0.000 0.000 0.000 0.000 0.000 -0.743 0.000 0.000 0.000 0.000 -0.723 -0.723 -0.747 -0.747 0.000 0.000 0.687 0.687 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.721 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.781 -0.106 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 -0.743 0.000 0.000 0.000 0.000 -0.723 -0.723 -0.747 -0.747 0.000 0.000 0.687 0.687 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.721 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.781 -0.106 -0.106 8.5260489 5.6469777 3.8704831 9.3963682 10.8218776 3.2855206 10.0625037 8.1545574 7.2473256 NA 13.8323098 12.2336998 1.8160262 1.8160262 3.2448871 8.3201687 5.6624932 9.8452183 12.0558193 11.4120836 8.5228651 5.9548012 7.1462642 8.8920306 4.3250482 2.9229590 5.5164754 2.3635356 11.7945276 3.5750339 6.1099518 7.8721540 6.0697945 7.9309809 10.8464921 2.2030758 6.4775413 0.4375474 8.6547563 12.6519054 6.4598939 10.1853828 0.1155660 6.5207397 8.8621116 5.7229277 0.7005285 0.1155660 3.5418617 2.5822188 NA 11.0111727 -1.8841677 10.6312973 10.8473408 10.1729124 3.5079088 8.7173683 14.2231415 7.9213411 2.7005507 2.9735745 10.2086848 1.8160262 NA 0.4375474 -0.2993827 12.496464 6.948488 9.941351 15.884777 9.632440 11.102506 13.317836 10.998623 9.528559 11.144540 13.825597 7.084264 10.001294 11.764966 NA 7.817770 11.908794 10.664419 10.895317 6.558542 14.134210 10.205048 4.203060 8.824681 7.570924 10.306931 4.473150 6.437526 10.106765 5.857065 -0.884434 12.478842 7.283015 8.347395 12.901356 10.591078 11.266614 7.548139 6.208355 10.530547 4.773806 11.453871 10.180003 10.717600 9.647466 11.329005 8.615443 11.682603 11.062869 9.368263 4.607449 7.900020 8.769920 11.770233 3.816036 12.068521 8.037438 10.300163 10.701499 7.641118 13.137135 9.684029 9.988272 12.386623 10.091445 -0.884434 -0.884434 11.086602 11.506841 9.987503 TCGA-D8-A1JB 54 0 NA 1688 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 1 3 4 2 3 4 4 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.387189e-07 9.09090909090909 13.6363636363636 4.54545454545455 40.9090909090909 31.8181818181818 10.6925077 9.9023736 11.6817009 9.6082711 9.2091936 9.5721283 10.0965412 10.3034654 9.6321451 13.7521842 10.9970267 10.8440017 0.8450283 13.3388517 3.7992531 8.7489405 6.2026117 8.9178613 9.1293047 12.7543894 2.5454989 13.2924004 7.0099652 9.1993082 10.5437634 8.3488844 -0.1548914 9.6966986 9.4073011 3.1669885 8.1804493 8.2586866 -0.1548914 5.0545142 10.7196559 10.4807769 9.8014350 10.8562861 10.2379128 11.4227237 6.3764397 10.6099304 14.0548167 8.2468555 9.7728368 11.0965412 11.1835166 4.8223376 5.2373763 9.4643618 11.7633630 NA 10.6419096 6.5999456 7.6588398 4.2373725 10.9503125 12.1077409 10.4510012 12.1169594 12.8797718 7.7368423 11.0575552 10.6805487 11.3147006 10.9145085 5.3207915 11.7726516 12.1783539 -1.1548914 10.1065661 9.2341523 4.2377167 6.1759756 10.4593086 10.2639655 10.7269375 10.2217268 4.4889134 9.4253173 13.4178774 12.3821558 10.1882445 9.5940902 0.1136000 0.4646800 0.0902850 0.0801680 -0.0034627 -0.2173800 0.3145000 -0.1225200 0.0898510 0.0898510 0.0898510 0.1271200 -0.2139200 -0.0637030 -0.0637030 -0.0637030 0.0094491 0.0094491 0.0518140 0.0868110 0.4071100 0.2725300 0.2725300 0.2725300 -0.0015243 -0.0015243 -0.0015243 0.2035000 -0.1144300 0.1136000 -0.3092100 -0.2155200 -0.0034627 -0.0732090 -0.1236900 -0.1236900 0.1744600 -0.1225200 -0.1225200 0.0847870 0.0801680 -0.2212100 0.0721090 -0.2051000 0.0637950 0.0637950 -0.2139200 -0.2139200 -0.0637030 -0.0637030 -0.0637030 -0.0637030 0.0094491 0.0094491 0.0054139 0.0518140 -0.2115600 0.0738330 -0.0694660 0.0566550 -0.2380200 0.2725300 -0.0669220 -0.0015243 -0.0015243 0.2035000 -0.2099500 0.0607940 -0.2325100 0.127 0.127 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.049 0.273 0.000 0.000 0.000 0.000 0.114 0.114 0.204 0.204 0.000 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 -0.124 -0.124 0.000 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 -0.101 0.127 0.127 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.049 0.273 0.000 0.000 0.000 0.000 0.114 0.114 0.204 0.204 0.000 -0.233 0.000 0.000 0.000 0.000 0.000 0.000 -0.124 -0.124 0.000 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 -0.101 8.4889150 NA 4.7992531 9.6099304 11.3590331 5.6108595 10.6447452 9.5905146 9.1974332 3.6524177 12.1874113 11.4262194 3.6524177 5.9743412 4.9111499 8.2352278 4.6779479 10.6724015 11.5734045 10.7999821 8.8867178 0.8450283 7.9691799 10.1136008 8.7030398 3.3044964 -0.1548914 -1.1548914 10.7620578 7.7698716 7.2544495 7.9717631 7.4486854 9.4943150 10.2905910 6.3449048 7.8839775 NA 8.6936817 12.8149849 8.0762801 6.8674270 -1.1548914 5.3044891 8.6556305 2.4300176 3.0149801 -1.1548914 8.1714881 4.2050718 4.3996496 9.7053699 -1.1548914 9.7691290 10.3909885 9.9378159 6.6716076 10.5376742 13.8138156 9.6190221 5.3207915 4.3369118 11.3162259 2.0149979 -1.1548914 NA 0.4300711 11.962863 5.352854 9.075079 13.338852 10.593671 10.866733 12.754389 12.670018 9.302060 10.716194 12.758322 11.540940 9.464362 8.059378 NA 8.061805 11.887573 10.8959278 11.9116526 6.7030398 13.4747546 9.0435039 8.6394746 8.7292292 8.3587866 10.3381236 8.0618048 8.8323229 10.9970267 6.4149152 6.3686200 11.6822925 6.4523895 7.3179525 11.0134175 11.1370928 10.9995605 8.0318666 7.9218743 10.9756293 8.9807679 12.3985981 9.8014350 10.4073012 9.6370356 11.5019305 9.9935354 10.8251983 10.5415917 9.0678538 -0.1548914 9.1743842 7.4560833 11.7633630 9.1106738 10.6419096 5.9846099 10.8597767 10.9503125 7.3288742 14.0374672 10.2135653 10.3548338 13.0911313 9.9865274 6.3288742 1.2966042 10.5567258 10.4588483 9.7654116 TCGA-D8-A1JC 59 0 NA 480 breast stage iiia t2 n2a m0 female 2010 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 1 1 1 2 1 2 2 9 5 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.872705e-06 6.589149e-07 20.2702702702703 43.2432432432432 5.40540540540541 18.9189189189189 12.1621621621622 10.9735926 10.5817003 11.7883704 10.3112242 8.8559657 9.3711602 9.5148770 9.6762477 9.6946095 14.2863979 11.1063852 10.6880785 2.8551924 12.5634994 4.6976460 8.5546713 7.0223467 8.9922679 7.5802902 12.2049845 4.0195774 13.9933499 5.3895255 8.8735939 11.3588771 5.7114536 1.8045492 10.9919145 11.3787504 3.2066589 8.5604039 7.6536326 -2.0028883 4.4729426 10.3120739 10.7680778 9.7637364 11.8406379 10.1693224 12.1410690 6.8489571 9.9866019 14.7052945 8.7563882 9.3792911 11.3625731 12.1088322 4.1057284 3.4566353 9.6040754 11.2363584 0.3191555 9.5826395 5.4810244 6.7981076 4.9279438 9.9744874 11.6538558 10.3029843 11.8599417 12.8077289 8.7769268 10.7985117 10.2439184 11.8185829 11.2653108 5.7183068 11.9542188 10.1621145 -2.0028883 10.7253406 9.7773370 1.7031893 5.3895255 9.7445612 9.5266381 10.5736919 11.0031828 3.9040987 6.2593026 12.6170836 10.8857605 10.4832883 9.0381821 0.758530 0.762930 0.071391 0.054732 0.096525 0.000000 -0.514550 0.024408 3.656900 0.494070 1.444500 0.080024 0.073258 0.066229 3.656900 3.656900 0.111660 0.111660 -0.668460 -0.153490 0.049682 0.141620 0.141620 0.141620 -0.652580 -0.189490 0.077288 2.792900 -0.656680 -0.654910 -0.092682 -0.673430 0.096525 0.055711 0.000000 0.000000 -0.514550 0.024408 -0.745340 0.086347 0.029466 -0.705190 -0.666700 -0.666700 -0.176890 -0.160770 -1.005300 -0.661520 -0.663370 0.092750 -0.664480 -0.677110 0.111660 0.114620 0.114620 -0.668460 -0.153490 -0.153490 0.050819 -0.621880 -0.654450 0.141620 -0.648090 -0.652580 -0.189490 -0.052396 -0.689240 0.059825 0.103660 0.000 0.000 -0.656 -0.656 0.112 0.112 -0.668 -0.153 0.000 -0.113 -0.637 -0.635 -0.493 0.301 -0.648 -0.653 -0.189 0.104 0.759 0.701 0.701 0.000 0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.755 1.445 -0.667 -0.177 0.000 0.000 0.000 0.000 -0.656 -0.656 0.112 0.112 -0.668 -0.153 0.000 -0.113 -0.637 -0.635 -0.493 0.301 -0.648 -0.653 -0.189 0.104 0.759 0.701 0.701 0.000 0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.515 0.000 0.000 0.000 0.755 1.445 -0.667 -0.177 0.000 0.000 8.617427426 -2.002888279 7.057902939 9.667421165 11.679543744 6.701006974 10.748751534 9.119019433 8.725382960 1.319155458 11.149650788 11.509383751 2.855192408 0.582170591 3.752095592 7.991560960 4.791621352 11.973592586 11.949311683 11.305404293 8.669632723 0.319155458 7.233221802 9.499541972 6.201778907 9.416641113 2.855192408 NA 9.943382793 5.254594043 6.452534487 7.807779295 7.847394405 9.984805499 10.563261492 3.520774236 8.534425842 3.389525513 6.814191499 11.672061794 8.067328407 6.095238766 -2.002888279 -0.002743728 8.339282164 NA 2.641060425 NA 5.823757002 6.764133804 1.997220136 9.924615084 0.997183998 9.567537652 9.911966255 10.063296651 5.604536921 9.619716903 14.250334766 8.674927026 4.867570339 3.974483425 12.424585806 1.167100969 NA 1.904079412 2.697640395 14.884341 6.389526 8.704567 12.563499 9.175872 10.854994 12.204984 11.713384 11.223233 11.207879 12.865451 10.031663 9.604075 7.757096 0.997184 7.316880 12.725978 10.9584763 12.1177694 6.7686965 13.3638364 8.3225127 6.1968804 9.6114572 9.8029514 10.2140867 6.9010889 7.9025946 11.1063852 6.5821706 0.5821706 11.0922748 3.9040987 9.1838170 11.2168298 10.3058309 10.8300975 10.2742042 7.7131693 12.2947686 5.9687520 11.4769764 9.7637364 10.4913130 9.9866019 11.3001320 10.3703446 10.3303629 10.7293749 9.0859958 7.1444125 8.6231993 8.7109720 11.2363584 5.5129063 9.5826395 8.3314809 10.5278577 9.9744874 7.5952597 12.1726791 9.5694339 9.7682843 13.2577228 9.6806408 1.1671010 4.1735272 10.4535619 10.6466882 10.0063363 TCGA-D8-A1JD 41 0 NA 552 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 1 1 6 2 4 1 5 6 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.942065e-06 3.81477e-07 7.35294117647059 26.4705882352941 1.47058823529412 38.2352941176471 26.4705882352941 10.3424445 10.3699355 11.5452261 9.7213292 8.3124950 8.5344157 9.5503678 9.8849315 9.8700544 13.1593529 10.8762099 10.7716266 0.2779847 12.7695738 4.0853227 8.8704282 6.6355237 8.5605965 9.8459273 12.2338390 4.3483599 13.2012987 7.3354216 8.8599248 11.4829091 6.5029368 -0.4589808 12.0200448 12.6456044 1.6564964 7.9742431 7.5010075 -1.0439433 4.1057870 9.9203840 10.7847747 9.4363284 11.8745337 9.7806042 11.2113668 -1.0439433 10.6871499 15.0106051 7.9113297 9.7500527 11.8596426 11.6082159 3.8629373 NA 9.8182930 10.7903166 NA 11.3428487 6.0328590 6.9867101 5.9218267 9.5985461 11.4666837 10.1347080 11.7072734 12.9263288 8.7666147 11.0143731 10.5219354 11.4004110 11.2999228 4.7504564 12.7214846 11.0172456 NA 10.5725919 9.6890585 2.4376006 6.7008766 9.9763287 9.8070113 9.8878886 10.9863654 3.0435020 7.2298388 12.8892266 12.1843357 9.3627795 8.7762221 0.3618200 0.8564000 -0.3485100 0.5836300 0.4828500 -0.0084385 0.0076392 -0.3516800 -0.6964900 -0.6964900 1.9242000 0.4835400 0.3381300 0.5542500 0.7400500 0.0200630 0.1420600 0.1420600 -0.4148700 0.4945900 -0.3106100 0.0978330 0.0978330 0.0978330 -0.0060548 -0.0060548 -0.0201380 0.6671500 -0.3221700 -0.0031859 0.0000000 -0.3328300 0.4828500 0.4483300 -0.0084385 -0.0084385 0.0076392 -0.3516800 -0.7126500 -0.4865100 -0.5847100 -0.6964900 0.2299300 0.2474700 0.2474700 0.2474700 0.3381300 0.3365800 0.5542500 0.0011093 -0.6073800 -0.6073800 0.1420600 0.1420600 -0.6996500 -1.0142000 0.4945900 0.4945900 -0.0641060 -0.6790800 -0.6587300 0.0978330 -0.0340860 -0.0060548 -0.0201380 0.6671500 -0.6668900 0.3183500 -0.3114300 0.338 0.338 -0.607 -0.607 0.142 0.142 -0.367 0.495 0.000 0.630 -0.294 -0.659 0.000 -0.306 0.000 0.000 0.000 0.000 0.856 0.667 0.667 -0.667 0.318 -0.290 0.000 -0.333 -0.333 0.368 0.000 0.000 0.000 0.000 -0.352 0.000 0.000 -0.696 1.924 0.247 0.247 0.149 0.149 0.338 0.338 -0.607 -0.607 0.142 0.142 -0.367 0.495 0.000 0.630 -0.294 -0.659 0.000 -0.306 0.000 0.000 0.000 0.000 0.856 0.667 0.667 -0.667 0.318 -0.290 0.000 -0.333 -0.333 0.368 0.000 0.000 0.000 0.000 -0.352 0.000 0.000 -0.696 1.924 0.247 0.247 0.149 0.149 8.31359505 -2.04394335 6.53347146 10.52304849 11.29867344 6.54228282 10.44086605 8.76105352 7.99478392 1.12598165 11.74006444 11.45987384 2.54099436 2.47959274 2.71092212 8.00589173 4.58540125 10.59357367 11.61637337 10.62115691 9.67157627 5.99496207 7.27797080 9.39794988 5.80153377 5.14586899 -1.04394335 -2.04394335 11.13905816 5.44789653 7.30698217 9.84706737 4.94472729 10.32352342 9.93832373 3.65648493 8.46581819 -0.04394335 7.25066414 12.29867344 7.48937274 6.39067112 -2.04394335 7.98671014 8.26096468 -1.04394335 2.34837408 0.54101915 4.82640612 6.27603133 1.65649637 10.69413541 -1.04394335 7.10324794 10.18034631 9.90331475 4.62847033 9.35585518 12.76887223 9.08468191 3.57075436 4.00043274 11.48937284 2.34837408 NA -1.04394335 0.54101915 13.13176809 6.18004440 9.20456381 12.76957382 9.81518970 10.92812541 12.23383903 11.84059525 8.97413205 11.13564125 12.83332726 10.91477707 9.81829297 8.95110371 -0.04394335 7.85388839 10.69919451 11.5657990 12.1042814 7.9700633 13.5574640 8.6204904 5.6070935 9.1557156 9.1152838 10.6675230 7.5296906 4.2414436 10.8762099 5.8140248 4.1848595 11.2799423 4.4154747 7.7571046 11.0811337 9.8978244 11.0395225 9.4478310 9.5812953 12.2207056 6.3569220 11.5169360 9.4363284 10.6536623 10.0285107 10.8567213 9.2847182 11.1980263 10.6050747 9.2210721 NA 8.9006745 7.7825914 10.7903166 5.7308301 11.3428487 9.1581668 10.5159460 9.5985461 8.2019048 13.5618988 9.8015331 9.8760237 12.6521957 10.6291314 0.7634116 -0.4589808 10.5096724 10.9450828 9.6048501 TCGA-D8-A1JE 62 0 NA 575 breast stage iia t1c n1a m0 female 2010 NA no infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 1 1 2 2 4 1 5 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 1.733986e-07 25.8064516129032 9.67741935483871 3.2258064516129 25.8064516129032 35.4838709677419 10.5643598 10.8921292 11.3220948 10.5394875 8.6607850 9.5611044 9.4875611 10.1362563 9.6253764 13.7652630 11.0118188 10.7892276 2.4340010 11.6451123 3.8865014 8.8380135 6.6859107 7.9674246 9.8053679 13.4859884 -0.2290441 14.1046487 5.4148831 9.4609207 9.9426212 7.8062847 -0.2290441 8.5000818 11.5437544 0.5080229 6.6039171 7.5567520 NA 4.2945913 10.2541714 11.8246140 10.6393356 11.5658494 10.1944935 11.3179219 -0.8140066 10.8797697 14.5105971 6.4577141 8.5181015 11.3921635 12.1663830 4.7559184 4.9674269 9.2467608 12.7976661 -0.2290441 11.7998544 4.5954559 6.4760835 4.7252231 10.9962349 12.0281206 10.0564296 12.4168359 13.1102743 8.3484564 10.9459531 10.8664552 11.6583750 10.9863582 5.5869448 12.1874731 10.7710275 -1.8140066 10.0629656 9.2181106 2.1569143 6.8263095 10.4241711 10.0054457 10.1340670 10.1142132 1.6455172 8.9442880 13.3199296 11.4281970 10.4061409 8.9131345 0.3961200 0.3961200 0.0145720 0.0189430 -0.3901800 0.4185400 -0.4076000 -0.3864900 0.0095883 0.0095883 0.0095883 -0.4203600 0.1227000 -0.4158800 -0.4158800 -0.4158800 -0.4136300 0.3678900 -0.3904000 0.0061834 -0.4186000 -0.4455500 0.0955080 0.0955080 -0.0665200 -0.0665200 -0.0665200 0.3657500 -0.4163000 -0.4163000 0.0000000 0.0145720 -0.4552200 -0.4201400 0.4299100 0.4299100 -0.4076000 -0.4076000 -0.4219300 -0.4069400 -0.4069400 0.0095883 1.1813000 -0.3970800 0.3771000 0.3771000 0.1227000 0.1227000 -0.4158800 -0.4158800 -0.4068300 -0.4068300 -0.4136300 0.3678900 0.3373900 -0.3904000 0.0061834 0.0061834 -0.4186000 -0.4272400 -0.4455500 0.0955080 -0.4038500 -0.0665200 -0.0665200 0.3657500 0.0023581 0.3409600 0.3409600 -0.418 0.000 -0.416 -0.416 -0.026 0.368 -0.390 0.000 -0.419 0.353 -0.057 -0.446 0.000 -0.404 -0.404 0.000 0.000 -0.416 0.396 0.366 0.366 0.000 0.341 0.000 0.000 0.000 0.000 -0.390 -0.390 0.430 0.430 -0.408 -0.408 -0.407 -0.407 0.000 0.000 0.377 0.377 0.000 0.000 -0.418 0.000 -0.416 -0.416 -0.026 0.368 -0.390 0.000 -0.419 0.353 -0.057 -0.446 0.000 -0.404 -0.404 0.000 0.000 -0.416 0.396 0.366 0.366 0.000 0.341 0.000 0.000 0.000 0.000 -0.390 -0.390 0.430 0.430 -0.408 -0.408 -0.407 -0.407 0.000 0.000 0.377 0.377 0.000 0.000 7.8496228 NA 6.5259154 9.4915567 10.7428105 5.1991933 9.8964409 9.1963761 8.0863279 NA 11.2294340 11.6954688 4.7252231 3.2735308 1.5079722 8.2331887 6.2735271 11.1531110 11.2955692 10.9503145 8.9772278 1.6455172 7.5740826 9.9367719 5.0929558 2.1860568 4.2945913 NA 10.3979532 4.3955153 7.0126134 7.4124775 3.6779141 8.7483073 10.4978132 2.2735159 7.4052334 NA 8.3217743 12.8674132 7.2028731 6.4668359 NA -0.2290441 8.7164714 -1.8140066 1.1860568 1.9934208 4.3758874 4.9554384 2.2735159 10.4639335 -0.8140066 6.0502514 9.9430381 10.2655498 6.9342582 10.2308006 13.8968983 8.0548875 1.6455172 3.6454942 10.6112808 3.7096215 NA 0.5080229 -0.2290441 12.1628680 5.7252231 8.1860647 11.6451123 9.9990445 10.9871670 13.4859884 12.0236929 9.1315087 10.6495893 13.0710939 8.5314704 9.2467608 9.3011086 -0.2290441 7.9122828 11.7347664 10.9078050 11.1651328 7.7896914 13.6728365 8.7943197 4.8154217 8.7775874 9.5848086 10.3619762 6.8690595 7.5954559 11.0118188 7.2249837 -0.2290441 11.3156699 7.4668359 7.1296643 11.0729046 10.1881767 11.0533437 8.2331887 6.4481593 14.6176115 4.9542475 10.9118018 10.6393356 11.1002632 9.2146618 10.6883995 8.7597121 10.4322117 11.2292632 9.2635483 NA 8.4027503 6.8543822 12.7976661 3.4714736 11.7998544 10.3030586 10.5375370 10.9962349 6.7096270 13.1494126 10.3204912 10.4607343 13.3230160 9.4070478 -0.2290441 0.7710404 10.5537527 10.8247271 9.4726226 TCGA-D8-A1JF 79 0 NA 366 breast stage iiia t1c n2a m0 female 2010 NA no infiltrating ductal carcinoma 8 white not hispanic or latino NA NA 4 2 3 1 2 6 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.710324e-07 2.080784e-07 20.5882352941176 14.7058823529412 2.94117647058824 35.2941176470588 26.4705882352941 10.8401298 11.0982511 11.0599780 10.3949711 9.0280906 9.5655517 8.3796712 10.3405352 9.5246888 14.1929111 9.2135082 10.8467305 4.1204017 12.7772407 10.0531056 9.6334684 5.9482177 8.5195698 5.9750592 12.4886142 NA 9.3909277 -0.2015762 9.3996225 12.1319056 8.0621309 3.8573640 10.4939890 11.5484797 1.2135028 7.7468381 8.2903239 NA 6.1263968 11.1798334 10.3730643 10.7531517 10.3568914 10.7923525 12.3261106 -1.7863728 8.6882283 13.6530145 7.8841467 8.1022513 12.0022265 11.8151629 3.7370702 -0.7863728 9.6470936 12.8070160 -0.7863728 10.4732515 4.6564506 7.7232835 4.9683949 11.4782440 11.4441291 10.0467936 11.7462294 12.9744360 6.4708964 11.2839646 10.3545232 11.5483401 10.7690560 5.1907887 11.6476151 8.5012206 -0.2015762 10.2503687 10.1713357 1.9403547 5.9549756 10.9681870 10.9324691 10.1986385 11.3361744 4.0961522 9.6902544 12.0856059 12.3207253 9.9833461 8.4802946 0.3727200 1.0602000 0.3604200 -0.0200790 -0.3957000 0.5361800 0.5969900 -0.0215880 1.6852000 1.6852000 1.7180000 0.3471300 0.2298400 -0.0565190 0.3218000 0.3218000 -0.0043717 -0.0123790 0.5887300 0.3514400 -0.4157000 0.1501600 0.1501600 0.1501600 0.3155300 0.3155300 0.3405400 0.7230900 -0.3795000 -0.3735300 0.0039452 -0.0165090 -0.4325200 -0.3996400 -0.4021400 -0.3970300 0.5864000 -0.0185690 -0.0633770 0.6802000 0.6561600 1.6852000 -0.4169700 -0.4139400 -0.0306180 -0.3991400 -0.4110800 -0.4110800 -0.0565190 0.3218000 0.3218000 0.2716500 -0.0043717 -0.0072744 -0.0413730 0.5960900 0.3514400 0.3481800 -0.4050100 0.3169800 0.1501600 0.1501600 0.1639100 -0.7576700 0.3563300 0.7115800 -0.3672100 -0.0311640 -0.0311640 0.230 0.230 0.322 0.322 0.000 0.000 0.596 0.351 -0.387 0.317 0.317 0.150 0.150 0.164 0.164 0.316 0.316 -0.015 0.359 0.712 0.712 -0.367 0.000 0.000 0.000 0.000 0.000 -0.396 -0.396 -0.056 -0.402 0.000 0.000 0.656 0.656 1.685 1.685 0.000 0.000 0.000 0.000 0.230 0.230 0.322 0.322 0.000 0.000 0.596 0.351 -0.387 0.317 0.317 0.150 0.150 0.164 0.164 0.316 0.316 -0.015 0.359 0.712 0.712 -0.367 0.000 0.000 0.000 0.000 0.000 -0.396 -0.396 -0.056 -0.402 0.000 0.000 0.656 0.656 1.685 1.685 0.000 0.000 0.000 0.000 7.3809259 -0.7863728 5.2358764 8.5275247 11.8098144 5.0982300 10.2548251 8.8338379 8.5736419 0.7985068 10.3746400 12.2329043 1.5354558 6.4802942 2.9139521 7.9683955 2.7370594 9.5890906 12.3795143 10.0260867 9.1560226 5.1560244 7.8318937 9.5303554 6.9174115 14.1798559 1.2135028 NA 11.3754274 2.3009730 6.7947083 8.7881017 9.3272504 8.2492282 9.9642152 1.9139521 6.9882950 NA 8.2078616 12.0712949 7.0589983 6.8681447 NA 8.6502196 8.6250191 2.6729457 2.5354309 10.5820146 5.7370702 5.1377248 2.1203851 11.3943498 0.5354558 10.8289079 10.6239596 9.8341863 3.7053587 11.1569388 12.2792609 9.0900251 3.2579007 3.4229595 10.9350346 3.0208577 NA NA 1.6729231 10.854808 6.903506 9.335689 12.777241 10.325296 11.592345 12.488614 9.908301 9.563342 10.932041 12.824821 9.142027 9.647094 10.111732 3.383428 8.390928 12.218694 10.3174516 11.5321922 6.8465033 14.5853340 8.4779509 8.2592678 8.5950512 8.7232831 9.1503375 5.7604019 5.5798318 9.2135082 6.1618756 2.7984653 11.6393797 5.4326755 8.2479493 11.1030122 10.2071542 11.7794433 8.4732516 6.7173337 10.1346052 8.5578041 12.3670824 10.7531517 10.1563892 9.8492263 11.8665771 8.7843126 11.5497358 10.2417596 9.4878862 -0.7863728 9.9992100 8.6998705 12.8070160 8.5776430 10.4732515 8.4720742 9.6244895 11.4782440 6.9243149 13.0248272 9.9919961 10.8169027 12.8866516 8.9087364 1.2135028 2.7370594 11.5256821 11.3398900 9.5115708 TCGA-D8-A1JG 62 0 NA 1612 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 2 6 1 2 6 2 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.705019e-06 7.282743e-07 25 30 3 22 20 10.5781374 9.5150055 11.4547136 10.6423634 8.2243650 10.3150542 10.3121214 10.6703463 9.8377497 13.6983304 10.2086799 10.5011654 4.4417557 14.2903982 4.5572324 9.0374138 5.7147758 9.1074310 8.0079921 11.5858079 -1.9506480 9.7107720 3.7773566 8.9846042 11.8166926 8.4058911 2.8043221 10.4487171 11.5351428 -0.3656855 9.0794165 7.7688281 1.0494217 7.0578683 10.6233230 10.0592678 8.6428304 9.6386222 10.3304999 12.1218231 11.5548786 8.2029911 14.3477703 8.9443782 9.6348619 10.8862786 11.4412198 4.2392605 1.8567865 9.0437926 11.1918654 NA 10.8120289 4.9563308 8.6769733 5.3162254 9.7794846 11.5685840 9.8692192 11.8206191 13.0667261 5.7773592 10.7576609 10.3684565 11.7711793 11.8206191 5.7841480 11.4520516 9.8130666 7.2949919 10.3206104 10.0349253 3.7227174 5.3532209 9.1349117 9.3475018 10.2764534 10.6040280 4.8567965 9.0267190 12.2590449 11.7192101 9.7013877 8.7705384 0.064697 0.062409 -0.253060 -0.244680 0.412500 0.427090 -0.247360 0.826720 -0.270050 -0.270050 0.730620 -0.231990 -0.251210 0.048731 0.000000 0.000000 -0.226950 0.068565 -0.609670 -0.254510 -0.239810 -0.598830 0.734220 0.120980 0.087868 3.538600 -0.248210 0.439070 -0.024209 0.064697 0.106910 -0.234070 -0.334070 0.352560 -0.617930 -0.626130 -0.247360 3.656900 -0.268010 0.432650 -0.265250 -0.280690 -0.611500 -0.611500 0.159100 0.159100 -0.251210 -0.251240 0.048731 0.000000 0.000000 0.000000 -0.160100 0.068565 0.027259 -0.609670 -0.243350 -0.243350 -0.239810 -0.238350 -0.598830 -0.557940 -0.251120 0.087868 -0.248210 0.460120 0.736500 -0.231250 -0.255720 -0.251 -0.251 0.000 0.000 -0.160 -0.160 -0.610 -0.243 -0.240 0.024 -0.234 -0.149 0.100 -0.251 -0.251 0.000 -0.248 0.000 0.000 0.439 0.439 0.736 -0.231 0.000 0.000 -0.253 -0.253 0.060 0.340 0.339 0.000 -0.268 -0.268 0.433 0.433 -0.270 0.449 -0.452 0.159 0.000 0.000 -0.251 -0.251 0.000 0.000 -0.160 -0.160 -0.610 -0.243 -0.240 0.024 -0.234 -0.149 0.100 -0.251 -0.251 0.000 -0.248 0.000 0.000 0.439 0.439 0.736 -0.231 0.000 0.000 -0.253 -0.253 0.060 0.340 0.339 0.000 -0.268 -0.268 0.433 0.433 -0.270 0.449 -0.452 0.159 0.000 0.000 7.0466187 4.8438532 4.9198025 10.0876723 11.3977524 5.8859306 10.7822426 9.3553526 8.0039552 NA 13.6110852 11.2565313 7.2392634 0.3713916 3.3348400 7.4481832 5.1787226 11.8398895 11.2758514 10.3310795 8.2478843 7.7094354 8.5312387 9.3657207 8.0924665 9.7481439 3.0938306 NA 11.3254182 6.0828622 8.1851485 8.5422937 7.1915459 9.1078029 9.6069030 4.5251731 7.8192773 -1.9506480 8.6824342 11.4758350 7.5372790 9.2262356 -1.9506480 8.2478843 8.0480296 NA 2.1369132 3.4069856 6.3162254 4.4528787 3.4417623 11.5075895 -1.9506480 10.5530166 11.3160794 9.7328726 5.5412918 10.8799544 14.3709270 9.3970606 6.4201270 3.8308029 9.9457716 2.9074291 NA -0.9506480 5.0938348 9.3668518 9.8515517 9.8009832 14.2903982 9.3003297 11.2690615 11.5858079 9.7355020 8.2686075 10.7472755 12.9329894 8.0065415 9.0437926 7.8664228 0.3713916 7.9487959 11.4499184 11.7236315 12.3316589 6.4331431 13.1661483 9.1670824 6.7289191 8.9058647 8.6733207 10.7718967 7.5671088 8.3056477 10.2086799 6.8242269 2.7498775 10.6801613 2.2193699 8.9123014 13.3577427 11.3165185 10.8937527 7.6413726 9.3138818 9.8547800 9.8418228 10.7022573 8.6428304 10.1494445 9.3769918 11.4290883 10.0508473 9.2029911 11.1798489 9.7752315 -0.9506480 10.5198287 7.4021005 11.1918654 9.9263397 10.8120289 7.7464068 11.5814298 9.7794846 8.1618786 12.9292584 10.2704221 10.9223065 13.0325664 10.6266320 4.3892915 0.6344074 10.6560758 10.6164445 10.3127084 TCGA-D8-A1JH 56 0 NA 426 breast stage ia t1c n0 m0 female 2010 NA yes infiltrating ductal carcinoma NA white not hispanic or latino NA NA 3 5 3 2 3 4 4 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.040392e-07 25 12.5 0 12.5 50 10.7507582 10.5500418 11.9980566 10.2967851 8.1533641 9.0764375 10.5882835 10.1407160 9.7899175 14.1863237 11.0344521 10.9559138 1.4873834 12.8539033 3.6718029 9.8909754 7.9453227 8.7205661 10.2168487 12.5744835 2.4873834 13.4906766 4.9937332 9.5520908 10.9636683 4.0723459 NA 9.6790023 9.5578692 4.0503188 8.2543630 7.8828191 2.1978654 5.3588674 9.8718718 10.3439494 10.1170701 12.2770642 10.1887676 11.8667607 7.7977886 11.9595193 14.9347591 7.8372848 9.6025443 12.0225694 11.5100024 5.3040766 5.5036827 9.4884066 11.9407465 0.6128714 11.1195514 6.2078597 6.8288511 5.4116533 10.8357081 11.7455200 10.5044438 12.6809077 12.9766830 8.0791594 10.9199242 10.8303641 11.4258927 11.4341557 7.6014655 12.0789047 11.9263632 -1.9719967 10.5188016 9.2312987 3.2800506 6.0447591 10.9316444 10.3722466 10.0682405 10.1700577 4.7144489 8.8280416 13.8028150 12.1534449 10.2663554 9.3964573 -0.00124730 -0.00124730 -0.01762000 -0.00456950 0.11717000 0.16370000 -0.00470790 -0.00470790 0.19223000 0.19223000 0.19223000 -0.01891600 0.01405100 -0.01609900 -0.01609900 -0.01609900 0.00055459 0.00055459 -0.02342900 0.00000000 0.09463700 0.00249690 0.00249690 0.00249690 0.11814000 0.11814000 0.11814000 0.12049000 -0.00124730 -0.00124730 0.00208050 -0.01762000 0.12638000 0.16220000 0.16370000 0.15912000 -0.00470790 -0.00470790 -0.00470790 -0.00788630 -0.00788630 0.16396000 -0.00774820 -0.00774820 -0.00774820 -0.00774820 0.01405100 -0.02009700 -0.01609900 -0.01609900 -0.01491600 -0.01694400 0.00055459 -0.00124730 -0.00124730 -0.02342900 0.00000000 0.00000000 0.09463700 0.04670000 0.00249690 0.00249690 -0.11678000 0.11814000 0.11814000 0.12373000 0.10979000 -0.03245000 -0.03245000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 0.118 0.118 0.000 0.000 0.120 0.120 0.115 0.000 0.000 0.000 0.000 0.000 0.117 0.117 0.164 0.164 0.000 0.000 0.000 0.000 0.192 0.192 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 -0.117 0.118 0.118 0.000 0.000 0.120 0.120 0.115 0.000 0.000 0.000 0.000 0.000 0.117 0.117 0.164 0.164 0.000 0.000 0.000 0.000 0.192 0.192 0.000 0.000 0.000 0.000 8.3133529 -0.9719967 5.3588674 10.2803205 11.0454551 6.6101301 10.6527462 9.4024741 8.6164966 3.2758712 11.6256541 11.0937724 3.1978811 3.0279502 4.7558703 8.8361107 4.6573084 10.6211084 11.5026707 10.3379955 9.1700577 1.7283995 8.2865166 10.4349529 6.8640016 5.8417316 4.0503188 -1.9719967 11.1893976 6.9821471 7.4008154 8.2028766 6.9227687 10.2043234 10.3552227 5.7421976 8.2829795 -1.9719967 8.8207409 12.6663866 8.5327697 7.5277968 -0.9719967 4.4873834 8.1259827 1.0279325 4.7283886 3.1978811 5.5198029 5.6819411 2.6129186 9.8397267 NA 9.1436447 10.3402665 9.6343560 5.6861615 10.0016482 12.0471071 9.2072379 2.5515160 3.7003731 10.7220910 2.1978654 NA 0.6128714 1.3498748 13.330697 5.275879 8.727523 12.853903 10.483278 10.274098 12.574483 12.909208 9.319121 10.993555 12.847631 10.376955 9.488407 9.122028 -1.971997 7.563226 11.647941 11.191600 11.838723 6.782838 13.680682 9.243484 6.511767 8.943083 8.423485 10.685926 7.541678 8.653659 11.034452 6.256769 6.192857 11.231146 5.519803 7.329150 12.265235 10.398911 10.453953 8.597806 8.139086 12.405636 6.860841 11.507365 10.117070 10.214374 9.596382 11.371692 10.133532 10.630418 10.698386 9.562254 NA 9.670513 8.127614 11.940747 6.372247 11.119551 8.769418 10.687412 10.835708 7.374641 13.800393 10.173564 10.167822 12.960950 10.533762 3.519806 3.115416 10.757359 10.662081 9.859258 TCGA-D8-A1JI 54 0 NA 577 breast stage iia t1c n1a mx female 2010 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 1 1 2 2 1 1 5 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 3.81477e-07 16.6666666666667 16.6666666666667 6.66666666666667 33.3333333333333 26.6666666666667 10.2656952 9.9233918 11.0265149 9.4476763 8.9845535 9.1727968 10.1435716 9.1679668 9.1737608 12.5683251 11.3040622 10.3088969 4.4587954 12.3702106 3.0853397 7.9612928 7.1804910 8.1416019 8.6117441 13.1181936 5.8353557 14.0149958 5.6031812 9.8954615 10.5891596 9.3740951 NA 7.7983299 10.5884368 1.2108875 5.6702965 5.7027185 NA 4.0521637 9.9938630 10.1708667 11.3084580 9.0321072 9.4651060 11.1023954 -1.3740750 10.2579887 13.5051505 6.7038399 9.7958273 12.0711758 10.8711578 2.8738329 -1.3740750 8.9296830 11.5608831 NA 10.7542188 2.6259017 5.1494626 4.2108642 10.2836673 11.6259023 9.9336724 11.2747092 12.4841747 8.3228696 10.2751584 10.7849126 10.7945744 10.5245037 4.7958293 11.5512713 9.7305010 NA 10.3474287 8.8231191 3.5833506 4.8926873 9.5440201 9.1650610 10.2127421 9.7226175 0.2108875 4.9113033 11.6343309 9.9635241 10.4741339 9.0214364 0.4405400 0.4693000 0.0175010 0.0175010 0.0370760 0.0366530 0.0985600 -0.7783800 0.8282300 0.8282300 0.0013868 0.0095883 -0.8986300 0.0244080 1.7550000 -0.8807800 0.0000000 0.0000000 -0.9430200 0.0168450 -0.0027707 -0.0583270 -0.0583270 -0.0583270 -0.1126000 -0.1126000 -0.1153400 0.6559000 -0.4471700 -0.4471700 -0.4455200 0.0175010 0.0370760 0.0370760 0.0366530 0.0366530 0.0985600 -0.7783800 -0.8010300 0.0259520 0.0204830 -0.9134900 0.0369350 -0.8895500 -0.8895500 -0.0661180 -0.8986300 -0.8986300 -0.0526990 -0.9398300 -0.8989300 -0.8989300 0.0000000 0.0000000 0.0000000 -0.8784500 0.0168450 0.0168450 -0.0027707 -0.9092700 -0.0583270 -0.0583270 -0.2385100 -0.1126000 -0.1153400 0.6651200 0.0114350 -0.0713250 -0.0661670 0.000 0.000 -0.881 -0.881 0.000 0.000 -0.878 0.000 0.000 0.000 -0.871 0.000 0.000 -0.239 -0.239 -0.113 -0.113 -0.007 0.441 0.665 0.665 0.000 0.000 -0.407 -0.407 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.778 0.000 0.000 0.000 0.000 0.000 -0.793 -0.230 -0.230 0.000 0.000 -0.881 -0.881 0.000 0.000 -0.878 0.000 0.000 0.000 -0.871 0.000 0.000 -0.239 -0.239 -0.113 -0.113 -0.007 0.441 0.665 0.665 0.000 0.000 -0.407 -0.407 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.778 0.000 0.000 0.000 0.000 0.000 -0.793 -0.230 -0.230 8.8280260 NA 5.2552590 9.3427218 11.7719936 8.2826488 10.8684810 11.4213352 10.3584937 -1.3740750 10.7746966 11.6338178 8.8157269 3.3263360 3.4332533 8.8243472 3.0182247 9.0500685 10.6177784 10.9245377 8.7908092 7.3367083 7.4492692 8.2239549 6.8206589 2.4332533 NA NA 10.1046719 6.4524505 3.1494707 7.8762007 6.5207208 9.2742239 10.2693075 3.9478344 7.6892971 0.9478531 5.4203173 12.6987885 8.8218897 7.7474357 NA 7.8231188 9.3220005 NA 2.6259017 NA 3.2697513 4.7855715 0.9478531 10.1723145 NA 6.7344265 9.6987048 10.1895753 8.7933204 9.9233918 11.2887931 8.1572838 0.2108875 3.4838803 13.3855824 4.2983284 NA 0.6259250 0.9478531 15.006262 3.625902 9.501652 12.370211 9.276954 10.687273 13.118194 13.160874 8.324607 10.382459 12.775094 10.004739 8.929683 8.639923 NA 7.820659 10.533169 10.911593 11.712204 6.883290 13.471978 8.433257 3.580097 9.454832 8.645493 9.939432 6.394087 8.097578 11.304062 6.520721 1.433280 10.833832 2.433253 6.211390 8.041644 9.052167 11.137655 10.090958 8.497808 12.702050 3.018225 10.829217 11.308458 11.371156 9.320260 10.809538 8.714691 9.686598 10.716676 8.529784 NA 8.175186 5.835356 11.560883 2.326336 10.754219 8.321131 10.691655 10.283667 6.765454 13.624581 10.808297 9.893859 13.174604 9.434867 -0.374075 -1.374075 10.062614 10.733119 9.532041 TCGA-D8-A1JJ 54 0 NA 611 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 2 6 2 2 2 2 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.491228e-06 7.282743e-07 25 34.375 0 21.875 18.75 10.4904851 10.7052302 11.2736618 9.8129440 8.1989120 9.8851744 9.9586588 10.3922340 9.5036980 13.7955609 10.7708186 10.8923364 1.0419438 11.3183831 3.8784311 9.5519839 5.2679927 7.8820298 8.1217920 12.5682858 2.2345626 12.5312008 7.1770856 9.0555799 11.4414331 7.0322331 -0.7653761 11.9685399 11.6019861 1.4045217 7.3817765 7.9641918 -1.7656213 4.1414655 10.4160342 11.2463228 9.4651923 10.9620664 10.7524867 11.4507109 10.1604966 10.2398450 15.2017751 8.5342601 9.4476755 10.9612153 10.8853987 2.0419088 4.8927844 9.6837200 13.4012836 -0.7653761 11.6719333 6.2898529 6.1534345 6.2118513 10.7011577 11.7230392 10.5369247 12.5096774 13.4720054 8.0027554 11.1874945 10.3872238 11.7163708 11.3816172 4.5921221 12.5846127 11.2329855 -0.1804953 10.5615625 9.0330430 3.6618408 5.9280576 11.4784891 10.9332760 10.2426498 9.8288959 3.4440309 9.5354958 12.4839811 11.9812956 9.3220343 9.1482089 0.567380 0.574820 3.656900 0.190560 -0.480550 0.302820 -0.173790 0.416130 -0.867350 -0.867350 0.151980 0.052810 0.052099 -0.024661 -0.024661 -0.024661 0.037076 0.037076 0.155320 -0.236800 0.047459 -0.515380 -0.508150 0.638830 -0.163450 -0.517020 -0.201370 0.083198 -0.183200 -0.248970 0.000000 -0.473210 -0.311550 -0.530000 0.302820 0.302820 -0.165360 0.414510 0.453770 -0.524910 -0.292480 -0.867350 -0.516920 -0.516920 -0.516920 -0.405170 0.052099 0.070673 -0.051869 -0.024661 -0.025346 -0.025346 0.037076 0.037076 0.037076 0.027357 0.059223 -0.220960 0.023005 -0.184080 -0.515380 -0.508150 -0.155030 -0.163450 -0.201370 0.040892 0.068091 -0.496320 -0.496320 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.237 0.000 0.458 -0.193 0.131 0.639 -0.155 -0.155 -0.163 -0.163 -0.249 0.300 0.000 0.000 0.000 -0.496 0.000 0.000 -0.733 -0.626 -0.481 -0.481 0.303 0.303 0.415 0.415 0.000 -0.246 -0.635 0.219 -0.517 -0.517 0.002 -0.318 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.237 0.000 0.458 -0.193 0.131 0.639 -0.155 -0.155 -0.163 -0.163 -0.249 0.300 0.000 0.000 0.000 -0.496 0.000 0.000 -0.733 -0.626 -0.481 -0.481 0.303 0.303 0.415 0.415 0.000 -0.246 -0.635 0.219 -0.517 -0.517 0.002 -0.318 8.1916732 7.3969626 6.3326041 10.7376517 11.9692810 5.8361185 11.1940300 8.7754259 8.2115506 0.8195047 11.3530258 11.2907196 1.0419438 2.2345626 3.5565030 8.1156851 3.7264280 10.6689390 11.6004836 11.0066797 8.8242224 2.7581326 8.4860538 9.9764596 6.0289868 4.1653090 6.1474614 NA 10.6487281 4.1653090 7.2373859 8.2679945 4.0674580 10.1015836 10.4209952 1.9350071 8.2925632 -0.7653761 7.6733635 12.0362797 8.4144806 9.6847516 NA 7.1741507 8.2017975 NA 3.3638579 NA 4.5383519 4.4683813 1.6939887 11.5774794 2.6940110 6.5788678 10.8388929 10.1133886 3.0925457 9.7972908 13.1316132 11.0611198 3.4440309 5.3220327 10.3966479 2.3220435 NA 4.3843193 -0.1804953 12.916321 6.092552 8.171209 11.318383 10.524590 11.128062 12.568286 10.718891 9.160867 11.262477 13.159337 9.532634 9.683720 9.745830 1.819546 8.390654 11.508804 10.7970523 12.2384406 6.2513802 13.4521879 9.1638298 4.7891606 8.8446734 8.8167133 10.0503069 6.3586934 8.5417723 10.7708186 6.5832994 2.2345626 10.7110644 5.4729751 8.0358108 11.3045245 9.4789352 10.8961268 8.2485918 9.1967445 12.0375925 4.4633870 11.6028964 9.4651923 10.1902212 9.5354958 11.8031213 9.3963331 11.0859300 10.3103847 9.6970736 1.9350071 9.7043201 7.9375922 13.4012836 3.1414655 11.6719333 8.6868125 10.0968212 10.7011577 7.6816545 13.7401348 10.1545519 10.4302511 12.4083265 10.6233958 -1.7656213 -0.1804953 10.5559358 10.8554784 9.3026778 TCGA-D8-A1JK 90 0 NA 612 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 5 1 2 6 2 9 5 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 3.84945e-06 1.421869e-06 7.79220779220779 22.7272727272727 3.8961038961039 31.8181818181818 33.7662337662338 9.74665338 8.95699318 10.90452572 9.08907940 9.12029413 9.63437328 9.31633200 10.45990021 12.00410917 13.87641640 9.90774965 10.47688186 0.51540969 12.18653089 4.99656049 9.74344916 4.38990404 8.17126088 6.63782902 11.90774961 -1.06945188 8.42832164 5.42232384 9.72605480 10.62308514 6.38990060 2.10040584 10.46865856 11.77124758 1.51540969 8.56346476 8.09537645 NA 5.64471578 9.84634898 10.28471909 9.32921331 8.61871989 9.58421053 10.28912092 4.10039743 8.19021285 15.44962982 6.09859010 8.82528733 10.83623273 9.63610200 3.45403109 -0.06960327 8.32707429 11.02454734 NA 10.05975274 5.01793081 7.09537698 5.73782464 10.05200322 11.42956811 9.75701824 11.36900166 12.42545023 8.29021934 10.80813724 10.54441100 11.35042984 10.45941205 4.28801889 11.70587421 8.69368209 -0.06960327 10.96595610 8.98575201 2.10040584 5.10039322 9.04941077 9.65753926 9.98167858 9.28912092 2.73781653 9.55068946 13.33394778 11.32573601 10.13075523 9.30006697 0.2012100 -0.0793430 -0.2981500 0.0615080 -0.2727200 0.6629000 -0.0408880 0.0992880 -0.0387140 0.4814800 0.2271500 0.3698600 -0.2987400 -0.2815600 0.0842090 0.0842090 0.0519560 0.0519560 -0.3219300 0.2585500 -0.0667880 -0.3067400 -0.3053400 0.1425100 -0.0321780 -0.2678600 0.0875340 2.2240000 -0.0073339 -0.0256200 0.0168450 -0.2981500 -0.3034500 -0.1653600 -0.8471500 -0.2860300 -0.0313590 0.2796300 0.0520990 0.4720400 1.4687000 -0.8855000 -0.1762600 -1.1110000 -0.2976800 0.1814700 -0.0374900 -0.3305200 -0.6497700 0.0842090 -0.2870300 0.4996000 0.0519560 0.0519560 -0.2933100 -0.1887300 0.2783700 0.7637000 -0.0494240 -0.0407520 -0.3290100 -0.3053400 0.0827650 -0.0321780 -0.3808900 -0.5706100 0.2032000 0.3572400 0.3396600 -0.027 -0.305 -0.287 -0.287 0.000 0.000 -0.256 0.278 0.000 0.524 0.524 -0.305 -0.305 0.000 0.000 0.000 0.000 0.000 0.201 -0.398 0.173 0.203 0.357 0.218 0.000 -0.298 0.000 -0.277 -0.277 0.185 -0.276 0.000 0.000 0.458 0.458 -0.858 0.227 -0.358 -0.358 0.127 0.000 -0.027 -0.305 -0.287 -0.287 0.000 0.000 -0.256 0.278 0.000 0.524 0.524 -0.305 -0.305 0.000 0.000 0.000 0.000 0.000 0.201 -0.398 0.173 0.203 0.357 0.218 0.000 -0.298 0.000 -0.277 -0.277 0.185 -0.276 0.000 0.000 0.458 0.458 -0.858 0.227 -0.358 -0.358 0.127 0.000 8.86710758 -1.06945188 6.47736486 10.06938142 12.19197699 5.87638188 11.13870403 9.25612375 8.94538297 NA 12.43702521 12.43639036 3.25240052 0.93047242 2.25238538 7.71510470 4.42232047 12.18888848 11.10320970 10.19549857 9.02454741 4.05975328 7.86416014 11.75880455 7.29679235 5.54518072 9.63955343 -1.06945188 10.43479209 0.51540969 6.49271205 8.19491244 9.21587198 9.70510843 9.64900247 3.93047242 9.05200309 NA 7.81005294 12.45072002 7.30115686 8.58689457 0.93047242 6.22508980 7.68869302 1.51540969 3.51543493 -0.06960327 5.72488488 2.52142770 1.73781653 11.57612812 5.03899359 11.58600038 10.69160535 9.54793714 5.98575315 11.09820142 14.19146269 8.93328464 4.93046769 5.21587270 9.79233204 2.25238538 NA 4.17839595 4.38990404 11.6676029 7.2388088 8.5958057 12.1865309 9.6786625 10.6421366 11.9077496 8.8388623 9.2158720 10.3398606 12.5261934 9.3324157 8.3270743 8.6378287 0.9304724 7.7538372 11.2504240 10.710599 12.922523 7.465745 13.861668 9.954910 7.715105 8.166484 8.622213 10.000886 6.843360 5.305507 9.907750 4.574326 4.322786 10.592248 6.178398 8.602753 12.507780 10.491758 11.434544 8.622213 8.085288 8.215872 7.581521 9.820590 9.329213 10.813495 9.917023 10.816547 10.336143 9.160490 9.664332 8.225090 1.515410 9.715930 7.613465 11.024547 8.211241 10.059753 6.837360 10.455990 10.052003 7.239355 13.448262 10.760985 10.284168 12.500918 10.861207 2.515435 4.178396 9.965269 10.446169 9.319563 TCGA-D8-A1JL 72 0 NA 611 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.427581e-06 8.669932e-07 8.33333333333333 16.6666666666667 8.33333333333333 37.5 29.1666666666667 10.84280799 9.50630857 11.29406412 10.11547548 8.66807444 8.45848536 8.46847661 10.65894193 9.85675823 12.81928608 10.77840704 10.42809056 2.21555435 11.20020547 2.87452158 11.18180194 7.15745911 8.86925576 8.99554048 6.51066607 2.42706976 11.57450247 9.75226941 9.57727511 10.75104221 5.86850158 -1.03238869 11.99013769 9.37437116 2.13756910 8.28617746 8.37171175 -0.03238869 5.16730574 9.72001522 10.33641384 9.98792011 9.79973347 10.77156391 11.32628583 3.49119893 6.97886144 14.53676337 8.65230435 9.55962431 11.70657130 10.80289557 5.37702655 NA 10.18982579 11.77850745 NA 10.07354312 5.52987715 8.09304829 5.71582749 9.81077051 11.40265370 11.04678604 11.15761359 12.75329143 8.24608405 10.49119662 10.17706966 11.11547555 11.26569720 4.93341684 12.12955379 8.66373278 -2.03209363 10.77740278 10.09884850 2.82958575 6.51452944 11.28716561 11.76011992 11.05741609 10.62361249 -1.03238869 6.58234374 13.19457358 12.19607757 10.11674656 9.58418346 1.1024000 0.0840650 0.3039300 0.7120800 -0.0728080 0.6007000 1.7306000 0.4646400 0.6721500 0.6721500 0.6721500 1.7118000 0.0230050 -0.0180780 -0.0180780 -0.0180780 0.6916700 -0.5000600 1.6184000 0.6736300 0.0478360 -0.0161460 -0.0161460 -0.0161460 -0.3635200 0.1364300 0.1364300 -0.1968700 0.2645200 0.2535500 -0.5128000 -0.0331320 -0.0728080 -0.5308300 -0.4731100 -0.4979800 0.2942100 0.4646400 -0.1001300 1.4262000 0.1955800 -0.1542200 -0.0388500 -0.0388500 -0.0517210 -0.0953840 0.0230050 -0.5432000 -0.0180780 -0.0180780 0.2384000 0.0168450 0.2180600 0.0026357 0.0026357 -0.5031800 -0.1458000 -0.1458000 0.0478360 -0.0788100 -0.0161460 -0.0161460 -0.4203600 -0.2932900 0.1364300 -0.1968700 -0.0365380 -0.0014166 -0.5322600 0.218 0.000 0.000 0.000 0.215 0.000 -0.114 -0.146 0.000 0.000 0.000 0.000 0.000 0.378 0.378 0.136 0.136 0.222 0.222 -0.197 -0.197 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 -0.473 0.465 0.465 0.196 0.196 0.000 0.672 0.000 0.000 0.259 -0.215 0.218 0.000 0.000 0.000 0.215 0.000 -0.114 -0.146 0.000 0.000 0.000 0.000 0.000 0.378 0.378 0.136 0.136 0.222 0.222 -0.197 -0.197 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 -0.473 0.465 0.465 0.196 0.196 0.000 0.672 0.000 0.000 0.259 -0.215 8.1325414 -2.0320936 8.7333350 9.2991114 10.7112068 4.8949390 9.5203038 10.3585720 7.8501093 -1.0323887 12.1382639 11.3239490 2.9218362 -2.0320936 4.5374887 9.4342210 4.9218314 11.3693142 11.5756584 11.7393304 9.0603917 1.8745216 8.4403256 10.7306394 7.5125991 7.6258462 2.3599428 0.5525738 11.0479525 1.8745216 7.0010580 8.9499151 7.9662251 9.6800069 10.1840774 4.9449147 8.4239890 6.3939001 8.2155621 11.7412890 7.0256268 6.6818807 -0.4473278 2.6680737 7.5469508 NA 2.9676298 -2.0320936 7.2036485 3.3304580 4.9101474 10.3965182 1.4270698 10.9321560 10.5633584 10.0607220 5.6471159 9.9254622 15.0646071 9.0994917 4.8745265 4.2895615 10.9234661 1.5525738 2.8256228 1.1375691 5.6955540 12.446143 8.770151 8.179523 11.200205 11.044784 10.814496 6.510666 8.696406 9.532737 12.108065 13.674023 10.849513 10.189826 7.850277 4.427063 7.805263 10.760628 11.122611 11.900034 5.640060 15.113515 8.813125 7.400177 9.449434 6.229730 9.481343 8.222663 5.427066 10.778407 8.887988 3.874522 10.681451 6.102062 9.042766 12.808658 10.449686 10.811752 7.978862 8.281651 10.329852 7.598812 10.322082 9.987920 10.259381 10.567547 11.779611 10.499016 11.347825 10.990869 9.544591 1.668074 10.031104 7.491197 11.778507 7.314148 10.073543 8.018843 10.706246 9.810771 8.273696 13.606608 11.279950 10.952231 13.066818 10.164851 4.582345 1.668074 11.129081 10.719597 9.890962 TCGA-D8-A1JM 59 0 NA 590 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 4 4 1 1 5 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 8.323135e-07 4.508365e-07 21.6216216216216 16.2162162162162 5.40540540540541 37.8378378378378 18.9189189189189 8.9948289 9.0214903 10.7406214 9.4914964 7.8177243 9.7743881 9.6365306 10.4859486 9.6157962 13.4459506 12.7102147 10.7509375 NA 12.1970852 2.9965695 11.1240622 5.8118229 8.9516548 11.0208511 7.0476682 -0.1188836 11.4751001 9.8937111 8.7359550 11.7159526 4.0774823 -0.7039244 8.7524787 11.9661164 0.6180507 8.3608668 10.6881731 NA 2.5440402 9.9209195 11.9857946 9.7769143 9.5849901 9.9747242 11.2454037 -1.7036894 8.4254073 13.5280203 7.9412419 9.1687990 11.7242225 10.1537164 4.2030132 -0.1188836 9.3709345 8.8284799 -1.7036894 9.8152690 3.7879757 5.8810870 7.7799399 7.9826246 12.0860652 11.1566291 8.7307524 12.8284191 5.6970037 11.3365851 11.0306538 11.7200279 10.7123938 4.1290109 12.0649287 8.1305953 -0.7039244 10.2338658 10.4685517 4.2046963 3.7555606 11.2835658 9.0086510 10.1568232 9.0518463 1.2961343 8.1618575 12.5818875 9.8881138 10.2131232 9.6542259 0.74746000 0.68421000 -0.80161000 0.79374000 -0.73222000 0.03552400 -0.82627000 0.03312700 -0.82220000 3.65690000 1.49700000 0.01936300 0.01754400 0.03397200 0.01126100 0.01126100 3.01380000 0.00000000 -0.80036000 -0.80119000 0.01000600 0.02328600 -0.76458000 -0.78908000 0.00069327 0.00069327 -0.80360000 0.01056400 -0.79235000 0.03411300 -0.02972100 -0.80161000 -0.81082000 -0.73714000 -0.81343000 -0.80956000 -0.82627000 0.03312700 0.03312700 -0.80551000 0.03143600 -0.81663000 -0.79110000 -0.79110000 -0.05145100 -0.05496000 0.01754400 0.04755200 1.19030000 0.01126100 -0.80352000 -0.80352000 3.01380000 0.00000000 -0.82350000 -0.80036000 -0.80119000 -0.03585700 -0.00747200 0.16880000 0.02328600 -0.76458000 0.04004400 -0.79168000 0.74081000 0.01810300 -0.76038000 -0.78395000 0.06766100 0.000 0.000 0.000 0.000 3.014 0.000 -0.800 -0.801 0.000 0.000 0.000 -0.765 -0.765 -0.808 0.000 -0.760 -0.760 -0.123 0.542 -0.791 0.000 -0.760 -0.784 0.000 0.000 -0.779 -0.779 -0.749 -0.749 0.000 0.000 -0.819 -0.819 -0.809 0.000 0.000 0.000 -0.740 0.000 -0.250 -0.250 0.000 0.000 0.000 0.000 3.014 0.000 -0.800 -0.801 0.000 0.000 0.000 -0.765 -0.765 -0.808 0.000 -0.760 -0.760 -0.123 0.542 -0.791 0.000 -0.760 -0.784 0.000 0.000 -0.779 -0.779 -0.749 -0.749 0.000 0.000 -0.819 -0.819 -0.809 0.000 0.000 0.000 -0.740 0.000 -0.250 -0.250 8.5273452 -0.1188836 7.9218332 10.5240408 11.1672593 6.2066178 10.9184048 8.2231020 8.4008671 0.2960756 10.9603492 13.1266359 1.6180507 NA 3.1034809 9.3749421 2.3835799 9.9422327 11.3151936 11.4928799 9.1818204 3.9108382 8.4369538 10.6668115 5.7473364 0.8811164 2.4660528 -0.7039244 10.0185047 5.2386378 10.9397548 8.9336547 7.1226727 9.5646661 10.6624463 NA 8.8157605 -0.1188836 9.6084398 12.4081563 7.6492713 6.8923133 NA 7.7859722 8.9372726 3.1540971 3.3405195 -0.1188836 5.8039193 3.6543783 3.7223895 12.0020804 NA 8.8029276 9.6259205 10.7493947 6.4957959 9.7984587 12.3015732 6.5152930 3.7223895 2.2961343 11.1294096 2.1034641 6.0443176 -0.7039244 6.3514057 8.661353 9.939078 7.631515 12.197085 9.427338 11.836131 7.047668 11.361540 9.275549 12.844043 12.943695 12.092874 9.370935 8.035905 2.383580 6.865979 10.364567 11.9245697 11.0069305 5.9826240 14.4187487 8.9641225 7.2933033 9.2734040 9.0889144 10.6025561 5.7307513 9.2647909 12.7102147 9.3628860 9.2060173 9.5434584 7.6884413 10.6816927 11.8149002 11.4809994 9.8578894 7.9662845 8.2876459 9.5327364 4.8196835 11.5908870 9.7769143 10.0112281 9.9529958 11.8491534 10.4157137 11.2263070 11.1966136 8.5369155 7.3756086 8.6989231 11.7649123 8.8284799 4.5055798 9.8152690 7.1163034 10.9503126 7.9826246 7.9793995 14.7191087 10.5146873 10.1649466 12.9096834 10.3429070 0.8811164 NA 10.8860093 10.1014649 9.3716033 TCGA-D8-A1JN 80 0 NA 620 breast stage iiic t3 n3a mx female 2010 NA no infiltrating lobular carcinoma 11 white not hispanic or latino NA NA 2 2 2 2 2 2 5 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.849854e-06 1.424927e-06 16.1490683229814 67.0807453416149 2.48447204968944 9.93788819875776 4.34782608695652 9.58091748 9.45556416 11.82874232 9.00713690 7.88437691 9.16783107 11.23388135 9.52924528 8.25850149 8.91722019 10.99436801 10.16522911 1.63645062 12.70824702 2.75193497 6.56718643 7.18077047 8.24377998 10.63597979 13.96540485 2.63645062 14.04380578 7.46087769 9.14610582 11.62323963 7.35526740 NA 7.16001156 9.21890513 NA 9.22266379 6.40021513 NA 3.57504604 10.34265774 10.37228754 8.90010995 11.77258618 11.03269748 11.73601647 6.90323595 11.52924528 12.77258618 9.07160582 11.08249889 10.22578850 8.73798752 3.75192426 6.35526828 8.55332402 12.84163182 2.37342549 10.94440922 2.75193497 4.98222241 2.63645062 10.59258364 12.01112674 10.34150581 11.10541284 12.44661942 6.62134275 9.85803665 10.12310357 11.95837759 10.98812489 4.44380554 12.21968898 10.77514794 0.05144171 9.63174547 9.07524140 4.01079774 4.33689033 9.94933240 10.34438369 9.35069503 9.75105945 1.85885630 10.17625457 13.13563099 10.90752336 10.23760124 9.47879975 0.9174300 0.9174300 -0.0119190 -0.0119190 -0.0083005 0.0379240 -0.0083005 -0.0083005 -0.0060904 -0.0060904 -0.0060904 0.0579390 0.0239160 0.0144700 0.0088534 0.0088534 0.0118180 0.0118180 -0.0197930 0.0224440 0.0603650 -0.8785900 -0.8785900 -0.8785900 0.1218200 0.1218200 0.1218200 0.0994910 0.0335490 0.0335490 0.0026357 -0.0119190 -0.0083005 -0.0469890 -0.0157410 -0.0189950 -0.0083005 -0.0083005 -0.0265660 0.0084743 0.0000000 -0.0060904 0.0202030 0.0202030 0.0202030 0.1475600 0.0239160 0.0239160 0.0144700 0.0088534 0.0296710 0.0803120 0.0118180 0.0118180 0.0118180 -0.0197930 0.0224440 0.0224440 0.0603650 -0.8954200 -0.8785900 -0.8785900 -0.9326000 0.1218200 0.1218200 0.0599370 0.0448570 -0.8720500 -0.8720500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.786 -0.904 -0.879 -0.879 -0.933 -0.933 0.122 0.122 0.000 0.884 0.000 0.000 0.000 -0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.786 -0.904 -0.879 -0.879 -0.933 -0.933 0.122 0.122 0.000 0.884 0.000 0.000 0.000 -0.872 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.06411140 2.75193497 3.29942051 10.36436998 10.98407085 8.11789915 12.25941644 8.55598828 8.43842718 0.05144171 11.97982029 11.05981404 -0.94841908 NA 1.37339765 7.07385450 3.29942051 9.76487358 11.67856484 10.68129895 9.39467276 9.15739545 8.01438319 10.72214323 6.08491041 4.00568742 -0.94841908 -0.94841908 11.04477920 7.23139593 6.85238718 7.88437691 7.46511496 10.65598922 10.61563644 4.47774855 8.02876693 NA 7.43086565 12.25819613 8.74671518 6.81303849 -0.94841908 6.46087851 8.42435192 6.04017134 1.85885630 -0.94841908 5.47775179 5.56213250 2.63645062 11.59137279 NA 7.49443081 11.13030491 9.48819845 4.69534245 10.92146631 13.05702382 7.99693101 3.13894550 3.69534802 10.56570788 0.05144171 NA 5.02876804 2.51091130 12.6750656 3.8063756 9.4944304 12.7082470 10.8320267 11.6258440 13.9654049 9.0129368 9.3445678 10.7287662 12.9017715 8.5652144 8.5533240 8.4944304 -0.9484191 6.8588414 10.2069377 11.036617 12.919924 6.417809 14.175969 9.263375 5.994003 8.141599 6.231396 10.924616 5.680845 8.243780 10.994368 4.806376 8.128303 11.240385 4.806376 5.219207 7.090406 10.783230 11.814077 6.819671 8.895408 9.245012 4.934130 12.741954 8.900110 11.065159 10.252998 11.864867 8.531267 10.509381 10.629388 8.679021 5.751927 10.075221 8.040200 12.841632 4.443806 10.944409 2.751935 10.807209 10.592584 6.928004 14.336200 10.800937 11.311819 12.549713 10.707465 1.858856 8.225963 10.473552 11.099293 10.034481 TCGA-D8-A1JP 73 0 NA 639 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma NA white not hispanic or latino NA NA 4 5 2 2 4 2 5 6 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.60098e-06 6.935946e-07 2.06185567010309 19.5876288659794 4.12371134020619 43.298969072165 30.9278350515464 10.1200722 9.7968983 11.7035812 8.5419426 9.1840132 9.0255092 10.5668254 10.1774458 10.3001316 12.4443645 10.8177793 10.3289702 4.1514854 12.2537782 3.4014666 10.1569561 5.6002400 8.1490444 9.6528364 12.9097065 3.4655958 13.4776091 4.5567421 8.9999811 11.3577717 4.6699508 -1.0579923 9.8443824 10.2973811 1.7494055 8.4596992 7.4218099 0.9420077 3.4655958 9.4763329 10.1624082 9.2594425 10.7725451 10.7697696 10.6805445 7.1169552 11.8944072 14.3150990 6.8681484 10.3865220 10.3808217 10.7550094 4.8489183 4.2995817 9.2503690 10.5617914 NA 10.9381503 6.2995817 6.6215098 5.6834972 10.3844551 12.1763983 9.5659115 11.6389975 12.5655685 8.1636170 11.3947860 10.9373236 11.2676165 10.4086162 3.7493841 12.2666324 11.4515575 5.8845442 10.1496544 9.3651459 3.2646865 6.0505539 10.4631395 10.1798375 10.5147301 10.6813886 7.1563491 8.4889243 12.5166234 11.9425582 9.9377971 9.7534046 0.0269350 0.1237300 -0.0226060 0.4184800 1.0646000 0.0161460 0.0220240 1.4086000 -0.5967200 -0.5967200 1.5490000 0.0484040 0.0303100 0.0647970 0.0585090 0.0585090 0.0256710 1.1449000 0.0181030 -0.1649700 1.1736000 -0.5933100 0.0518140 0.0518140 0.0519560 0.0519560 0.1162400 0.2339500 -0.5732800 -0.6192000 -0.5943900 -0.6141200 0.0910100 -0.1674300 -0.6374600 -0.0378980 -0.6207300 1.4086000 0.9227000 0.7482200 0.0038854 -0.6174800 0.0448570 0.0448570 0.0448570 0.0774300 0.0303100 -0.6075700 -0.6070000 0.0585090 -0.6197800 0.0397610 0.0256710 0.0109820 0.0109820 -0.6218800 -0.1649700 -0.1649700 -0.6137400 -0.5834300 -0.5933100 0.0518140 -0.6131600 0.0519560 -0.5623600 0.5958400 -0.0402090 -0.2459400 -0.4470600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 0.616 0.000 -0.583 -0.593 0.000 0.230 0.230 0.000 0.000 0.000 0.000 0.596 0.596 0.000 -0.434 -0.380 0.000 0.000 0.000 0.000 -0.187 0.000 0.000 0.000 0.869 0.000 0.000 0.384 0.979 0.000 0.000 -0.278 -0.278 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 0.616 0.000 -0.583 -0.593 0.000 0.230 0.230 0.000 0.000 0.000 0.000 0.596 0.596 0.000 -0.434 -0.380 0.000 0.000 0.000 0.000 -0.187 0.000 0.000 0.000 0.869 0.000 0.000 0.384 0.979 0.000 0.000 -0.278 -0.278 8.89185660 7.47341109 6.77492012 10.27742027 11.02650615 8.16402797 10.93567602 8.54706495 8.87341766 NA 11.96266270 11.57325929 3.74938409 5.02949264 3.98642004 7.78751997 4.87276967 10.54982259 11.53027606 10.33112341 9.65025171 2.11196609 8.75901365 10.66995040 6.86684247 4.49661574 NA NA 10.67800894 4.18995894 7.34717133 7.88747348 6.37665851 11.17553277 10.29131116 4.18995894 9.24923081 NA 7.44187600 12.55363114 8.81393507 8.30397386 -1.05799229 3.58588793 8.52511280 NA 2.40146664 1.26393581 5.73644523 4.56290790 2.74938409 9.85865586 -0.05799229 7.05577157 10.67165066 10.01349227 5.02949264 9.06485780 11.88362780 9.17564959 1.74940555 4.07131648 11.16603161 2.94202649 NA 0.94200771 0.52697021 10.700778 7.642470 9.780446 12.253778 10.229742 10.006773 12.909707 13.195804 8.916444 10.182821 12.463385 11.745556 9.250369 7.975453 NA 7.836848 10.880139 11.11851475 11.19646805 7.93355198 13.08357672 8.38082164 7.28187997 9.36829473 9.24139833 10.35894883 7.28187997 5.22743304 10.81777929 8.94062046 3.40146664 10.68812431 8.12690525 7.72999794 11.01784329 10.21290925 10.19882832 8.45942383 8.25717944 9.29958193 6.45773053 12.07147074 9.25944246 10.19055054 9.79923337 12.51591376 10.10127056 10.46950690 10.29517670 8.15634908 6.93071487 9.09354116 7.29517658 10.56179142 5.13185285 10.93815028 8.58227486 11.31313677 10.38445514 6.81239426 13.76823081 9.72993253 10.04269221 12.88820518 10.92252657 0.52697021 -0.05799229 9.67419739 9.52793144 9.74212094 TCGA-D8-A1JS 77 0 NA 371 breast stage ia t1c n0 m0 female 2010 NA no other, specify 0 white not hispanic or latino NA NA 3 1 2 2 4 1 5 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4.508365e-07 2.080784e-07 31.5789473684211 26.3157894736842 0 15.7894736842105 26.3157894736842 9.11909208 7.83562727 10.94110213 7.56481713 9.37428117 9.03094792 10.33584487 9.05831081 9.14567083 12.29709777 11.42788316 9.92272963 -1.62994734 13.23327894 1.69198075 8.34160421 6.66468194 7.33006266 8.98660946 13.62401884 2.27694325 13.94660398 5.47858358 10.70783854 10.71518854 6.07742033 -0.62994734 8.31550464 12.64916329 NA 9.53433907 4.51980606 NA 2.27694325 9.27544758 9.19422375 10.69985689 10.14813767 9.63274279 10.42568200 4.32425617 10.65690711 13.58107431 8.80164176 10.23926878 11.01233800 9.78474591 1.69198075 4.59887730 6.90144256 10.45652855 NA 10.81015114 1.82948427 3.45752863 1.82948427 9.79265106 11.62921535 10.42160938 11.01616924 12.41274597 8.46677556 10.34160410 10.40906873 10.79396438 10.23926878 3.86191567 11.04557662 8.67269936 -0.04498484 10.25766198 8.32425707 1.69340890 3.37006661 10.90897701 9.14895901 10.30190608 8.20926424 1.82948427 10.72541168 11.75376489 10.62243039 9.62213457 9.16040897 0.8072700 0.8239200 -0.0053992 -0.0053992 -0.0048461 -0.0034627 -0.0073760 -0.0073760 0.0015255 0.0015255 0.0015255 0.0058309 0.0058309 0.0034687 0.0034687 0.0034687 0.0104240 -0.0049844 -0.0027707 0.0015255 0.0109820 0.0055529 0.0055529 0.0055529 0.0029133 0.0029133 0.0029133 0.0136320 0.0000000 0.0000000 0.0016642 -0.0053992 -0.0048461 -0.0048461 -0.0034627 -0.0034627 -0.0041546 -0.0073760 -0.0073760 -0.0008316 -0.0008316 0.0015255 0.0027745 0.0027745 0.0027745 0.0027745 0.0058309 0.0058309 0.0034687 0.0034687 0.0034687 0.0034687 -0.0049844 -0.0049844 -0.0049844 -0.0027707 0.0015255 0.0015255 0.0109820 -0.9131100 0.0055529 0.0055529 0.0109820 0.0029133 0.0029133 0.0136320 0.0052749 0.0174040 0.0174040 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.906 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.807 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.906 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.807 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.29931908 NA 4.69198633 11.32025196 12.30430431 8.41808409 12.52511596 7.88802538 9.85462672 -1.62994734 12.26554121 10.88666925 2.76237008 -0.62994734 -1.62994734 7.81300385 2.89361461 9.42058956 11.66353222 10.90509287 9.69029696 9.31696685 7.93611435 9.98890491 3.92465101 3.61799192 -0.04498484 NA 10.23540720 6.43615018 8.19978324 8.09627872 6.12494843 9.86537603 10.08043662 2.69198075 8.23269817 NA 4.61798604 13.23989538 7.58194923 7.87189785 -0.62994734 -0.62994734 8.34160421 6.79212523 3.01390885 -0.04498484 1.17740758 6.36441485 0.37005266 10.41684354 -0.62994734 4.81300642 11.46940840 9.70600917 4.65546060 9.93468648 11.44034929 5.77945147 0.69198075 2.45751550 11.41871777 3.01390885 NA 1.82948427 -0.62994734 12.68195363 3.53999006 9.25423121 13.23327894 10.19660913 11.37392982 13.62401884 11.16488255 9.21931714 10.00985352 12.93635252 7.49676512 6.90144256 10.21044512 -0.04498484 8.17580451 10.38721701 10.240040 12.568275 5.709911 15.164831 9.084306 1.370053 8.617988 6.813004 9.356621 5.425342 7.234246 11.427883 5.264878 6.462818 9.505129 5.489000 5.341833 7.221809 8.938017 11.006685 6.514719 9.453540 9.190240 1.829484 9.456064 10.699857 10.496120 10.742926 10.531507 7.591648 9.130781 10.103076 8.325711 NA 9.738436 7.100700 10.456529 NA 10.810151 2.177408 10.656041 9.792651 6.457524 13.929468 11.277327 10.966017 12.681596 10.151010 -1.629947 NA 9.625089 9.915508 9.082588 TCGA-D8-A1JT 70 0 NA 405 breast stage iia t2 n0 m0 female 2010 NA no other, specify 0 white not hispanic or latino NA NA 1 1 2 2 1 1 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 7.282743e-07 2.427581e-07 21.4285714285714 7.14285714285714 7.14285714285714 42.8571428571429 21.4285714285714 11.1598518 10.1498651 11.3156243 8.4991383 10.1273791 9.2375281 8.9467557 8.2981574 8.0789460 13.4037315 11.6531438 10.4612417 1.0597706 11.8414637 2.4223137 5.8890232 5.2065924 8.7118294 9.4354127 13.5621583 0.5743438 15.1093096 3.6786579 9.2947411 11.0195477 7.1041469 NA 4.9938645 10.4569689 NA 6.7601930 7.8411127 NA 1.5743438 9.6132449 12.3333818 10.1453200 11.9742446 10.0537019 10.7245809 NA 11.9040101 13.2291409 7.2764567 9.1464577 9.8935464 11.7101634 3.0597533 -1.7475843 8.9186218 10.7087521 -1.7475843 10.8115358 5.7362125 5.3504301 3.2524005 10.3178139 11.6427011 10.3188234 12.8691189 12.8304756 8.8326562 11.8622690 11.2170996 11.7465033 10.2861649 3.0072852 12.3602687 12.3601052 NA 10.1134847 10.1637898 1.2577951 4.9528367 9.4354127 9.8213040 10.5053588 11.5504603 2.4223137 6.0852887 12.8367144 11.4099026 9.6948229 8.3791024 0.77003000 1.49380000 -0.02109800 -0.02109800 0.75891000 0.77252000 -0.00553750 -0.88144000 0.49320000 0.50116000 2.91160000 0.00180300 -0.00055444 -0.01367700 -0.01367700 -0.01367700 0.02806000 -0.00484610 -0.64284000 0.00000000 0.00861350 0.81591000 0.81591000 0.81591000 0.05466000 0.05466000 0.06852200 0.80480000 -0.00152430 -0.00152430 -0.00971690 -0.02109800 0.79007000 0.75204000 0.77252000 0.77252000 -0.00553750 -0.88144000 -0.02780800 -0.01656700 -0.01656700 -0.89634000 0.78022000 0.78022000 0.78022000 0.78022000 -0.00055444 -0.00055444 -0.01367700 -0.01367700 -0.01367700 -0.01367700 0.00513590 -0.00484610 -0.00484610 -0.64284000 0.00000000 0.00000000 0.00861350 -0.90189000 -0.84915000 0.81591000 0.77868000 0.05466000 0.06852200 0.80480000 -0.00415460 0.04004400 0.04004400 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 0.000 0.000 -0.039 -0.871 -0.033 0.816 0.790 0.790 0.000 0.000 1.494 1.494 0.805 0.805 0.000 0.000 0.000 0.000 0.000 0.000 0.752 0.752 0.773 0.773 0.000 0.000 0.000 0.000 -0.403 2.680 0.780 0.780 0.193 0.193 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 0.000 0.000 -0.039 -0.871 -0.033 0.816 0.790 0.790 0.000 0.000 1.494 1.494 0.805 0.805 0.000 0.000 0.000 0.000 0.000 0.000 0.752 0.752 0.773 0.773 0.000 0.000 0.000 0.000 -0.403 2.680 0.780 0.780 0.193 0.193 8.6447151 NA 6.2747648 9.4679307 11.3235249 6.9356035 9.7336926 6.2822915 8.5062453 NA 12.1900475 11.9233527 5.0205822 0.5743438 1.0597706 6.8853926 2.7759566 10.3107279 11.1886677 11.4985445 10.4520701 2.5003177 6.8926424 9.5197697 4.7915588 8.3687417 0.5743438 NA 11.1012163 7.0106210 6.5516052 7.2410822 3.4618559 9.3925885 10.2868529 2.7759566 6.1532642 NA 6.0978889 11.8672226 8.7896161 6.5698100 -0.7475843 1.5743438 10.0661790 3.8671057 -1.7475843 0.2524157 2.5003177 6.6501585 0.5743438 9.6038893 NA 7.7159222 10.2040468 9.8643446 2.3398500 8.6425666 14.4464813 8.1119327 3.2524005 0.8373782 13.9811686 1.8373782 NA 2.1592740 2.4223137 14.086894 4.678664 9.944141 11.841464 9.369391 11.378296 13.562158 12.483694 9.053298 10.352732 13.554251 9.436033 8.918622 9.199304 -1.747584 7.678663 11.094945 10.296450 10.492295 6.899856 12.782803 9.728638 3.110380 8.252398 9.230393 9.944154 2.500318 7.323860 11.653144 7.153264 NA 10.366791 8.663909 7.676480 9.994286 9.725596 11.240905 11.301736 6.609950 12.457656 3.252401 13.473246 10.145320 11.241615 10.190507 11.784023 8.592248 10.812969 10.494381 8.461851 NA 8.285477 6.728131 10.708752 2.252385 10.811536 6.263624 10.391309 10.317814 7.004143 12.442145 10.586950 10.994497 12.480239 9.063773 1.059771 NA 10.707211 10.087659 10.026361 TCGA-D8-A1JU 51 0 NA 447 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 5 3 2 6 4 4 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-07 1.733986e-07 10 10 10 50 20 10.91766708 10.23137036 11.23623614 9.61149609 8.41819248 9.10283709 10.10570322 9.70787882 10.18798358 12.35515841 10.89843398 10.39929448 2.71378378 12.79588040 3.81332972 10.13285197 5.96533409 8.55149795 9.30660767 12.55726720 -0.09357114 12.82939581 5.28726173 9.68210500 10.16853461 7.51130199 NA 12.06504845 8.00095716 4.07636241 8.80428529 7.81132524 NA 5.08966339 9.99124816 10.17283601 10.17478690 10.13846099 10.26655536 10.71486780 1.78089798 10.71137746 14.37034730 8.03738771 10.09213289 11.17537165 11.14862154 5.34384483 3.49140419 9.61437416 11.65965658 NA 11.36723700 7.48889575 7.02538101 5.67902963 10.62981631 11.62682659 10.35799442 12.21960629 12.87318558 8.40362648 11.14245403 10.95399094 11.25829926 10.71647585 4.87606504 12.31317631 10.96420598 2.02190608 10.58650628 9.20106064 3.49421078 6.04939770 10.04982310 10.17361668 9.94215540 9.97879582 5.08966339 8.99036241 13.12742267 13.12787590 9.72235673 9.23436671 0.45207000 0.45207000 0.08623300 0.08060100 -0.01849000 0.09623400 -0.00912860 -0.00912860 0.20076000 0.20076000 0.19908000 -0.00023387 0.00194180 -0.00180140 -0.00180140 -0.00180140 -0.01477800 -0.01388900 0.08956100 0.07771800 0.09536300 -0.00553750 -0.00553750 -0.00553750 0.07124800 0.50811000 0.50811000 -0.00774820 -0.02370300 -0.02370300 -0.01862800 0.08623300 -0.02000100 -0.01849000 0.09623400 0.09623400 -0.00912860 -0.00912860 -0.00912860 0.09754200 -0.35419000 0.20076000 0.00000000 -0.00180600 -0.00180600 -0.00121950 0.00194180 0.00194180 -0.00180140 -0.00180140 -0.00180140 -0.00180140 -0.01477800 -0.01243800 -0.01243800 0.08956100 0.07771800 0.07311500 0.09536300 -0.35430000 -0.00553750 -0.00553750 0.09202500 0.07124800 0.50811000 -0.00774820 0.09101000 -0.01656700 -0.01656700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.217 -0.354 0.000 0.000 0.000 0.000 0.000 0.437 0.000 0.452 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.354 -0.354 0.201 0.201 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.217 -0.354 0.000 0.000 0.000 0.000 0.000 0.437 0.000 0.452 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.354 -0.354 0.201 0.201 0.000 0.000 0.000 0.000 8.53943491 NA 6.38217267 10.23324374 10.78142119 6.44539234 11.02473203 9.63072052 8.94352902 6.40893939 11.97812565 11.15403707 2.22835695 4.67902963 4.02191496 8.28581832 4.34384838 11.25553673 11.36877168 10.70949459 8.85285874 3.56940602 7.86837193 10.26362519 6.66132776 7.70518171 NA NA 11.37862292 7.18875598 8.52360116 7.70733980 6.11589263 10.07832550 10.24814390 5.56940602 8.12075886 -0.67853364 9.10611220 13.14125726 8.26692097 8.14961402 NA 3.32148079 8.41423449 6.13525781 5.31016195 -0.09357114 5.55029736 5.34783571 3.74774185 10.02840491 NA 9.10774697 10.15555332 9.75192995 5.04939988 9.74616847 12.88449480 9.77010983 1.64339445 4.02191496 10.69705982 0.32146636 NA -0.67853364 2.78091897 11.476528 3.679030 8.379469 12.795880 10.322182 10.534278 12.557267 11.649170 8.996296 10.512845 13.363906 9.396956 9.614374 10.754541 NA 7.776805 10.831252 11.397959 11.671035 6.841114 13.515501 9.014093 6.275674 8.374045 7.343845 10.132406 6.419510 7.018445 10.898434 6.821324 4.387569 11.375403 3.780908 4.693208 12.284283 10.545177 10.729807 8.430002 8.419509 12.298847 7.201060 11.711857 10.174787 10.558687 9.299473 10.964657 9.937107 10.424765 9.982810 9.343845 -1.678534 9.597206 8.105016 11.659657 6.007978 11.367237 8.446891 10.661606 10.629816 7.191842 14.262319 10.121164 10.964206 12.943472 10.481979 1.321466 NA 10.229119 10.683695 9.929732 TCGA-D8-A1X5 81 0 NA 565 breast stage iiic t2 n3a mx female 2010 NA yes infiltrating ductal carcinoma 14 white not hispanic or latino NA NA 4 2 5 1 1 1 2 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 1 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 9.01673e-07 5.895554e-07 30.2325581395349 16.2790697674419 0 30.2325581395349 23.2558139534884 10.5559310 10.2049632 11.5673851 10.0514779 8.9571023 9.1489555 10.0860596 9.4006718 9.3368801 13.7068673 10.6482561 10.3393117 NA 15.4143301 4.0514765 8.5005177 6.2547622 8.1277308 9.3133252 12.7489942 -0.1964423 13.3891584 5.5177953 9.3511775 11.7904590 6.3885133 1.1254527 10.0924164 12.0850457 2.8910108 7.9809701 7.3271125 NA 5.1434016 10.0556244 9.8969679 9.8923385 10.3903901 10.5369895 11.4262886 NA 11.0035294 15.1339246 8.5852052 9.4671085 11.5492247 12.2839619 3.1254858 0.3884651 10.1605524 10.4251443 NA 10.8963075 5.4034620 6.9634221 5.4900502 10.2588775 11.3130779 10.3595773 11.3120879 13.2048965 9.3542972 10.6816012 10.1768233 11.6551042 10.7123182 5.8369744 12.9365319 11.0761801 NA 10.2521829 9.6109052 3.2688685 6.2792837 10.5840901 9.7979037 10.4196396 11.2604181 3.5584391 7.7548347 12.2666915 11.6787237 9.2893796 9.1589015 0.73057000 1.44240000 -0.40451000 0.75356000 -0.39152000 -0.38828000 0.65387000 0.40427000 -0.80285000 -0.82728000 1.14030000 0.40878000 -0.39430000 0.01391300 0.77535000 2.82690000 -0.39397000 -0.39270000 -0.39720000 0.39662000 0.01126100 -0.39241000 3.65690000 0.04854600 -0.03326900 -0.03326900 0.35512000 2.19770000 -0.39857000 0.70776000 -0.00332430 -0.40451000 0.02314500 0.00000000 0.02034300 0.02034300 0.65387000 0.40427000 0.40427000 0.00571940 -0.41520000 0.00034821 -0.40230000 -0.39007000 -0.39007000 -0.40070000 -0.39430000 -0.39430000 0.01391300 0.03242200 -0.39853000 -0.39853000 -0.39397000 -0.39270000 0.17648000 -0.39884000 0.39662000 0.39662000 0.01126100 -0.38213000 -0.39241000 -0.38246000 -0.38862000 -0.11104000 -0.03326900 0.46605000 0.00944910 -0.38358000 -0.38358000 0.371 -0.394 0.000 0.000 -0.379 0.000 -0.399 0.397 0.000 0.865 -0.382 -0.392 0.000 -0.389 -0.389 0.000 0.000 0.361 0.731 0.466 0.466 0.000 -0.384 0.000 0.000 -0.251 0.154 0.000 0.000 0.000 0.000 0.000 0.403 -0.393 -0.393 0.000 1.140 -0.390 -0.390 0.298 0.298 0.371 -0.394 0.000 0.000 -0.379 0.000 -0.399 0.397 0.000 0.865 -0.382 -0.392 0.000 -0.389 -0.389 0.000 0.000 0.361 0.731 0.466 0.466 0.000 -0.384 0.000 0.000 -0.251 0.154 0.000 0.000 0.000 0.000 0.000 0.403 -0.393 -0.393 0.000 1.140 -0.390 -0.390 0.298 0.298 8.816175 3.610901 3.757749 9.999538 12.151725 6.812819 12.251796 8.982589 8.786672 NA 11.652760 11.801383 2.262974 4.475973 4.584908 7.786544 3.973474 10.150064 11.237657 11.131664 8.719430 4.388513 6.901583 9.333957 6.311345 7.165494 1.388520 NA 10.248565 5.780830 6.649041 10.804255 6.013004 10.551529 10.245975 2.973483 8.560107 NA 6.667736 11.471105 9.193719 5.584911 NA 6.937976 8.388513 5.373405 3.327112 NA 4.636439 6.287367 1.803558 9.486545 -1.196608 9.177503 10.209224 9.912728 5.195867 9.959001 12.880366 9.588185 5.836974 2.973483 12.915012 2.503985 NA 1.388520 -1.196608 13.6229466 5.9015813 8.1764155 15.4143301 9.4043925 11.2737007 12.7489942 12.5303007 11.1280122 10.5567002 12.9478899 9.3514088 10.1605524 9.1118894 0.3884651 7.2256152 12.4033470 10.605663 12.510909 7.022718 13.965665 8.528064 4.757749 6.440175 8.204430 9.494002 7.388512 6.403464 10.648256 6.958368 2.803558 12.051626 3.610901 7.832009 10.865259 9.617332 11.392031 8.825918 9.369604 11.448308 6.853399 12.699505 9.892339 10.325641 10.118134 11.978476 9.388513 11.420099 10.428803 9.231910 8.095872 8.768426 7.420136 10.425144 7.056216 10.896308 7.998307 9.983155 10.258878 8.329071 13.841756 9.887030 10.133347 11.332981 9.731328 -1.196608 NA 11.281056 11.394605 9.542487 TCGA-D8-A1X6 80 0 NA 541 breast stage iiia t3 n2a mx female 2010 NA no infiltrating ductal carcinoma 5 white not hispanic or latino NA NA 5 1 2 2 4 1 1 4 1 1 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 6 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 1.387189e-07 28.125 15.625 3.125 31.25 21.875 10.0956750 10.2682512 11.1480283 8.7563188 8.8597646 8.6273019 9.3851510 9.0756915 6.7807930 12.5292821 11.3104550 10.9501604 1.1991855 12.3462380 3.0736489 9.2514405 5.8996131 8.1167120 9.8163357 13.0575008 4.5528136 14.5189719 3.4215734 9.9802061 11.7976405 3.8366008 -1.9708652 11.8080339 10.7229541 1.0292762 8.5972056 7.3556788 NA 2.4215599 9.3296019 10.3607262 11.5147014 10.8200052 9.7761835 10.6319482 1.1991855 10.9301162 14.1200648 8.0885535 9.5881483 11.4719338 10.5049828 3.0292408 NA 8.5876703 10.6963609 -0.3857142 10.8874247 8.4597021 6.7740833 4.4042901 10.4383751 11.7552546 11.0814778 10.5960170 12.6348447 7.2983761 10.8674685 10.5435763 10.5642817 10.7874726 3.6439601 11.9741445 12.3129889 -1.9708652 10.6506145 10.1472171 2.6178157 7.0845320 10.6314843 10.0657664 10.2933988 10.2931055 0.3511760 5.3053723 11.9365156 11.7290387 9.3477923 8.9776165 0.0086135 0.0086135 0.0759910 0.0698120 -0.0147780 0.7199900 -0.0065050 -0.0065050 0.9534400 1.8345000 2.1896000 0.0120970 0.0120970 -0.3496600 -0.3496600 -0.3496600 0.0000000 0.0000000 -0.3580600 0.0141900 0.0332670 0.0279190 0.0279190 0.0279190 0.1017600 0.1017600 0.1017600 0.0343950 0.0086135 0.0086135 -0.3315600 0.0759910 -0.0147780 -0.0111980 0.7199900 0.7199900 -0.0065050 -0.0065050 -0.0065050 -0.0020784 -0.0020784 -0.9913700 -0.3484700 -0.3484700 -0.3484700 -0.3198400 0.0120970 0.0120970 -0.3496600 -0.3496600 -0.3496600 -0.3366400 0.0000000 0.0000000 0.0000000 -0.3582600 0.0141900 0.0141900 0.0245700 -0.7219900 0.0279190 0.0279190 0.0134920 0.1017600 0.1017600 0.0343950 -0.3421700 0.0432990 0.0432990 0.000 0.000 -0.350 -0.350 0.000 0.000 -0.358 0.000 0.000 1.322 -0.722 0.000 0.000 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 -0.342 0.000 -0.332 -0.332 0.000 0.000 0.000 0.000 0.720 0.720 0.000 0.000 0.000 0.000 0.114 2.190 -0.348 -0.348 0.000 0.000 0.000 0.000 -0.350 -0.350 0.000 0.000 -0.358 0.000 0.000 1.322 -0.722 0.000 0.000 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 -0.342 0.000 -0.332 -0.332 0.000 0.000 0.000 0.000 0.720 0.720 0.000 0.000 0.000 0.000 0.114 2.190 -0.348 -0.348 0.000 0.000 8.71837396 -1.97086520 4.77071807 10.50244776 11.50915594 8.17325738 10.93782966 7.76017769 9.15693428 0.35117600 11.62439032 10.79864514 7.73833348 0.02927618 3.38679715 8.11803781 4.87473796 9.84262974 11.21102284 10.45760958 9.57951526 4.94811488 7.60478893 10.72534760 5.70873077 4.50498261 -1.97086520 NA 10.94718083 3.07364888 4.87473796 8.07773649 4.38680405 10.95333072 9.57855271 4.97176425 8.59053728 NA 4.83660586 12.76992615 9.07090851 6.35117777 -0.38571419 0.35117600 8.43545441 6.45551464 2.78412703 NA 3.95998339 6.41855766 -0.38571419 10.88489657 NA 6.19917369 10.29896056 9.94326073 3.88723280 8.11538549 12.48020286 9.76184091 1.93613850 3.07364888 12.58437772 0.83657052 NA NA 0.61419156 14.079489 5.790801 9.804448 12.346238 9.698134 11.025723 13.057501 11.976886 9.303628 10.628930 12.720339 9.804036 8.587670 8.704324 1.029276 7.799087 10.122997 10.624740 12.006619 8.057156 13.543900 8.502955 4.116714 8.645798 9.408086 9.502884 7.463877 7.642118 11.310455 6.408627 1.936139 10.668816 7.777442 7.450452 7.818783 9.696804 10.486887 10.228449 8.526103 10.799913 3.959983 11.326464 11.514701 10.528099 9.376317 11.618432 8.913420 9.810199 9.996836 8.580958 NA 8.690707 5.983445 10.696361 2.116697 10.887425 5.377977 10.399664 10.438375 6.858972 14.108356 10.914755 10.225544 12.428527 9.565982 -1.970865 NA 10.163355 10.272423 9.360166 TCGA-D8-A1X7 40 0 NA 509 breast stage iia t2 n0 mx female 2010 NA no other, specify 0 white not hispanic or latino NA NA 3 1 5 3 4 1 5 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.040392e-07 26.0869565217391 17.3913043478261 4.34782608695652 26.0869565217391 26.0869565217391 10.6729038 10.5214385 11.5234535 10.2510725 8.9115265 9.3903732 10.1190712 10.7483560 9.2099580 14.1007439 11.1035303 11.4537352 1.4537546 10.7924716 4.9391607 9.0197892 5.9327061 8.2059486 9.3743857 13.5969271 1.8322419 13.1559512 1.7167715 8.7349328 10.6921400 7.7556888 0.7167715 10.4370139 9.7497337 0.1318528 8.1289867 10.3567132 NA 4.4716557 9.9045341 11.2557668 10.0805394 11.5313521 10.2780576 11.6919011 15.5632721 12.4282932 14.7517548 7.5284760 9.6854269 11.0115818 11.7445604 4.1541781 -0.8682788 9.2179434 10.7389062 -0.2833163 11.5652621 5.3509745 5.5994130 3.8866965 10.9725850 11.8128259 10.2694387 11.8701105 13.0820440 9.0037124 10.9509883 10.9410286 11.7134785 11.4344461 5.3891951 12.6597117 12.0920806 -0.8682788 9.8858595 9.1569467 1.5938796 5.3797353 10.0167407 11.2126247 10.4469567 9.8921112 5.2610907 4.3216323 13.4019564 11.5709887 9.7158301 8.8235507 1.77220000 1.78370000 0.00069327 0.00069327 0.00485790 0.00319100 -0.01090700 0.00291330 -0.00263220 -0.00263220 -0.00263220 -0.00774820 -0.00774820 -0.01147300 -0.01147300 -0.01147300 -0.00664320 -0.00664320 0.00124810 -0.00954260 -0.01615400 -0.02205800 -0.02205800 0.62934000 -0.03299600 -0.03299600 -0.03299600 -0.01725400 -0.02041200 -0.00235530 0.00458000 0.00069327 0.00124810 0.00298720 0.00197820 0.00027728 -0.01090700 0.00291330 0.00291330 -0.00180140 -0.01790100 -0.00263220 -0.01298900 -0.01298900 -0.01298900 -0.01298900 -0.00774820 -0.00774820 -0.01147300 -0.01147300 0.00180300 -0.01962700 -0.00664320 -0.00664320 -0.00664320 0.00124810 -0.00954260 -0.00954260 -0.01725400 0.65424000 -0.74412000 -0.02903800 0.00013863 -0.03299600 -0.03299600 -0.01725400 -0.00733390 -0.02329200 -0.02329200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.635 0.635 -0.711 0.629 0.000 0.000 0.000 0.000 0.000 0.377 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.635 0.635 -0.711 0.629 0.000 0.000 0.000 0.000 0.000 0.377 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.0610655 NA 4.7317209 10.2109585 11.4731870 6.8034544 11.8045639 8.7088677 8.1009346 1.3017047 10.8567473 11.9220406 6.0326739 -0.8682788 2.4537283 7.4287236 4.3797318 9.2245642 11.7167696 11.6637977 9.8313796 NA 7.9115262 9.7265983 6.3412599 3.9897839 7.1318076 NA 11.1806345 4.4716557 5.9710101 8.0205505 4.4355886 9.8162359 11.2134570 4.5068494 8.2675166 NA 7.0386974 12.3242541 7.5068463 7.5601670 -0.8682788 -0.8682788 8.7792656 5.1318076 2.8866867 NA 4.3017340 3.6581886 1.7167715 10.0838203 -0.8682788 7.0684451 10.8749585 9.9607370 4.8460520 8.1707263 11.8887803 8.4727700 1.3017047 2.8322419 11.9102950 3.8042291 NA 2.0386820 -0.8682788 13.3544424 4.8460520 9.2166154 10.7924716 10.5821808 11.2347670 13.5969271 12.2710387 9.0983127 11.2703989 13.6222820 8.9670680 9.2179434 8.5559733 -0.8682788 7.8059992 11.6157488 10.8846059 11.6386105 8.2285224 13.8036240 9.2751903 4.3216323 7.4241285 9.1911515 10.1454858 6.4537349 9.9074174 11.1035303 6.0386974 -0.8682788 10.8387348 7.1679811 7.7408932 13.0491792 8.2416376 11.2668751 7.3868359 8.0446963 12.6149931 4.7756616 10.7237665 10.0805394 10.2281929 9.6665963 11.8279053 9.4910077 10.4270021 10.5380121 9.8361432 NA 9.4947592 8.0085390 10.7389062 5.1204930 11.5652621 7.0947027 9.7381152 10.9725850 7.4333033 12.9275424 10.0458185 10.3806242 12.7867228 9.9391621 2.5241138 -0.8682788 10.6281616 11.3737903 9.6656235 TCGA-D8-A1X8 62 0 NA 783 breast stage iiia t1c n2a m0 female 2010 NA yes infiltrating lobular carcinoma 9 white not hispanic or latino NA NA 3 1 2 2 4 4 3 8 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 5.201959e-07 2.774378e-07 34.7826086956522 26.0869565217391 4.34782608695652 17.3913043478261 17.3913043478261 10.42891610 10.19196009 11.32410048 10.03230352 8.68828179 9.59813776 10.26692226 9.71311342 9.55849419 9.80324496 10.64190326 10.75304104 1.34845906 13.18812750 3.90301898 8.38185482 7.26431123 8.64305238 9.07890172 13.59305560 2.87200131 13.84222453 8.59991396 9.42718292 11.04278953 8.67710650 -0.06657844 9.97002563 9.56335779 2.04886391 7.92018431 7.11330356 NA 5.16860995 9.70543368 10.55055547 11.45368537 10.96543987 10.48862235 11.84366208 3.10331299 11.52117164 14.50313108 9.22588439 9.97322710 12.27491293 11.36489171 5.32571021 3.96314116 9.27695000 13.33893450 NA 11.73980946 6.28506925 6.18132124 4.70598343 11.03733754 11.81972577 10.48638334 11.86289910 12.94520375 8.19078176 10.99589001 10.95603240 11.81221141 10.85275405 5.44646468 11.52569541 10.80555591 -0.65154094 10.25719948 9.10164824 2.35202400 6.24325016 10.57484383 10.16581499 10.06824825 9.90971956 2.51835888 10.86855914 13.05767701 12.19636981 8.82618999 9.63729760 0.45956000 0.45956000 0.00000000 -0.00527220 -0.00719580 -0.00069303 0.00013863 -0.00830050 -0.52788000 0.00013863 0.00013863 0.00444110 0.00444110 0.00569190 0.54983000 0.51037000 -0.00913350 -0.00588330 -0.00581400 -0.00121280 0.00694350 0.00889200 0.00889200 0.00889200 0.00458000 0.00458000 0.00458000 0.01684500 -0.49371000 -0.00235530 -0.01103400 0.00000000 0.01922300 -0.00719580 -0.00069303 -0.00069303 0.00013863 -0.52961000 -0.00830050 0.00152550 0.00152550 -0.52788000 0.00263570 0.00263570 0.00263570 0.00263570 0.00444110 0.00444110 -0.51029000 0.00569190 -0.51166000 -0.51166000 -0.00913350 0.00346870 0.00346870 -0.00581400 -0.00121280 0.00638710 0.00694350 -0.51125000 0.00889200 0.00889200 0.00527490 0.00458000 0.00458000 0.01684500 -0.00110870 0.02567100 0.02567100 0.000 0.000 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 -0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 0.000 0.000 0.000 0.000 0.000 8.55788486 NA 6.47255276 10.34455202 11.24249146 6.49471961 11.38786477 9.40572608 8.63198314 4.53825879 11.09536577 10.52894691 3.43589524 4.67035883 3.10331299 8.56153579 4.68828109 10.41687404 11.66584424 11.05880758 9.47900213 6.85225733 7.74074883 9.89773506 7.31709871 5.14284634 -1.65154094 -1.65154094 10.68661083 7.11992156 7.02085663 8.25832482 5.57725056 9.96146127 10.49913094 7.01731621 8.00306754 -0.06657844 7.74289414 13.06616158 8.16861045 7.75357312 -0.65154094 7.27621003 8.48926153 1.93338379 4.59635676 0.34845906 5.76628507 6.05295706 4.20640880 10.09200376 -0.65154094 8.67486102 10.48478192 9.97231312 4.47771618 10.13265742 12.56381293 9.48926133 1.51833370 3.43589524 13.89258105 2.67036449 NA -0.06657844 1.51833370 13.449133 5.155786 8.597545 13.188127 10.441519 10.819090 13.593056 12.445558 9.709504 11.185074 13.269901 9.574242 9.276950 8.449094 1.518334 7.348432 11.199204 11.08059904 11.70268100 7.69272777 13.95092577 9.11164405 6.62455569 8.43589441 8.93433309 10.41116584 7.51333835 6.18132124 10.64190326 6.79964298 -0.65154094 11.11537456 3.51835888 6.37096633 10.53794733 9.95020243 11.36871712 8.24612587 7.45171968 12.82631633 5.87981357 11.12488518 11.45368537 10.60640864 9.87346303 11.57318699 9.73967515 10.50798765 10.71475381 8.74610614 -0.06657844 8.97989958 6.65221256 13.33893450 5.46737405 11.73980946 7.51835652 10.01398963 11.03733754 6.87590904 14.09145149 9.53887354 10.32785676 12.98720689 10.02350654 0.67038716 0.16812853 10.56092804 10.97048342 10.03973898 TCGA-D8-A1X9 66 0 NA 727 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 1 2 2 2 1 2 3 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.150143e-06 5.895554e-07 4.93827160493827 17.2839506172839 1.23456790123457 49.3827160493827 27.1604938271605 10.88549925 9.67016246 11.48600259 10.62188603 9.26598300 8.94982233 9.76925023 10.14647461 8.81209739 14.46959344 10.97251949 11.26108472 -0.39820842 13.59379672 3.57145839 8.59240882 4.61678113 8.58672534 7.76506261 13.34582494 1.71729805 13.73652577 NA 9.36038293 11.37812803 7.96377581 0.01692414 11.16129523 9.52119211 0.60179158 7.44313418 7.72939642 -1.98336106 5.20669401 10.27631857 10.53675154 9.10632005 11.07079543 9.91962150 11.98066878 -0.39820842 10.29270308 14.55931204 8.18153792 10.07316859 11.15386068 11.95562216 4.49260310 4.50872020 9.42466852 10.24568829 NA 11.48638420 9.96997470 7.00839164 4.55603083 10.39109405 12.08774522 10.90618343 12.05441652 13.82364573 7.15129566 10.67753405 10.39778243 10.84182833 11.65247435 5.38319278 11.87756862 13.30555545 -0.39820842 10.11094730 9.28189851 2.70617688 6.54434628 9.87718059 9.84341814 11.24388379 10.04304711 3.71730902 5.09368693 11.99584811 10.68531139 10.31865149 9.42626056 -0.01367700 -0.00636680 0.00805670 -0.00166290 0.00000000 0.58524000 0.53319000 -0.74820000 0.02342600 0.02342600 0.70551000 0.70120000 0.00444110 0.00903120 0.77329000 -0.73126000 -0.01532900 0.71096000 -0.75868000 0.72225000 0.10074000 -0.02999400 0.65811000 1.27770000 -0.04698900 -0.03980100 -0.06786000 0.72206000 -0.01890200 0.00694350 -0.01422800 0.00805670 -0.83728000 0.13406000 0.00458000 -0.73126000 0.55337000 -0.74820000 -0.02452400 0.68896000 0.00015225 -0.75823000 -0.61575000 -0.61575000 -0.00553750 -0.01660900 0.00444110 -0.01009400 0.01223700 -0.01340200 -0.74456000 -0.77031000 -0.75564000 0.00346870 -0.02246900 -0.73655000 -0.03067700 -0.04996500 0.00194180 -0.77694000 -0.77637000 0.65811000 -0.74092000 -0.77888000 -0.06906400 -0.60893000 0.01572700 -0.77431000 -0.77431000 0.000 0.000 0.000 -0.731 0.000 0.000 -0.679 0.000 0.000 0.000 0.000 -0.728 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.689 0.000 0.000 0.000 0.000 0.000 -0.175 -0.175 0.000 0.000 0.000 -0.731 0.000 0.000 -0.679 0.000 0.000 0.000 0.000 -0.728 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.774 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.689 0.000 0.000 0.000 0.000 0.000 -0.175 -0.175 8.88105582 NA 4.50872020 9.95608149 11.76893654 5.30928171 9.90218470 9.35821052 7.95772659 -1.98336106 12.03880382 11.64233185 4.98265596 -0.98307586 4.45981192 7.69458912 3.94761006 11.04477558 11.98003659 10.48167059 9.83704853 2.26480663 7.81453120 9.83983869 5.75157887 1.18681746 5.73796792 NA 10.60932660 7.24809076 9.95461117 8.30688832 5.29299519 9.60605259 10.22845376 2.40917367 8.64804654 NA 7.96231361 11.53834731 7.92826135 6.29299335 NA 4.14615013 8.04062398 1.92375770 3.94761006 NA 5.22632356 3.27463440 1.18681746 10.48523903 2.92375770 6.26004448 10.72098936 10.08631937 4.52466551 9.38319170 14.74314096 8.33428223 5.05029272 6.87485105 11.13548626 3.66072330 NA -0.39820842 0.01692414 14.371066 5.682205 8.867056 13.593797 9.631579 9.947237 13.345825 12.269609 8.474250 11.168045 12.840088 9.164074 9.424669 8.442086 NA 8.206694 12.942795 11.1000165 11.6261638 6.8465924 13.4189466 9.1849148 5.8112861 8.5733757 9.7953574 10.0182355 6.5676169 6.6498655 10.9725195 6.2695344 0.6017916 11.6096769 6.5167149 7.1419467 12.5213783 10.3209357 11.3126385 7.8810558 8.9652368 13.2095862 5.4005755 11.5225311 9.1063200 10.5315836 9.6324993 11.5850632 10.1833466 10.8781504 11.1371074 9.1748481 NA 8.8105867 6.7510030 10.2456883 5.1358098 11.4863842 8.4070387 9.6774450 10.3910940 7.4721969 13.4409046 10.6391502 9.8157464 13.1409505 9.6817613 -0.3982084 2.8242180 10.5374883 11.0322846 9.7570719 TCGA-D8-A1XA 64 0 NA 839 breast stage ia t1c n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 1 4 3 1 1 1 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 2 0 0 0 5.548757e-07 1.387189e-07 25 15 5 15 40 10.2214842 9.7075412 12.3688473 9.6015411 8.4830471 7.9463396 10.8702147 10.1675453 9.7096396 14.1146821 11.3523770 10.8907052 1.0203422 12.8151624 3.2833736 10.0124290 5.6409274 8.0971562 9.8134561 12.8896258 -0.3015148 13.8499839 4.1246755 9.0584802 11.4595480 6.5871549 0.6983963 10.9130350 10.6959447 -1.3015148 6.2530003 7.3094372 -1.3015148 3.0203422 10.0987581 10.8832877 9.4280331 9.5105897 9.6627533 12.1958900 2.2833884 11.1175825 14.5863945 9.6538952 9.8231800 12.5074771 11.7480908 4.8276971 5.4665978 9.9843924 11.1426508 NA 11.8160554 4.2833736 6.0647341 6.5249601 10.1480769 11.4307918 10.5482084 11.1537395 12.5359417 7.6379913 10.4478629 10.2576652 10.6892254 11.9957586 5.3277700 12.6893141 8.4549688 -1.3015148 10.6620310 9.1670365 3.2238550 5.5810559 8.1309540 9.8481595 11.2261337 10.2467526 4.3422703 7.9005360 14.1811258 10.8475243 10.1485926 9.2871271 0.10001000 0.10001000 0.10045000 0.10045000 0.11242000 0.83903000 -0.72305000 -0.69812000 0.09361900 0.09361900 0.09361900 0.05993500 0.06952400 0.08377400 0.08377400 0.08377400 0.07699700 0.07699700 -0.69823000 -0.70505000 0.00263410 0.00000000 0.00000000 0.00041431 -0.11273000 -0.11273000 -0.11273000 0.73056000 0.10001000 0.10001000 -0.68377000 0.10045000 -0.74229000 0.13081000 -0.70001000 -0.70001000 -0.73258000 -0.69812000 -0.74268000 -0.24095000 -0.26292000 0.09361900 -0.71738000 -0.71738000 -0.71738000 -0.78218000 0.06952400 0.06952400 0.08377400 0.08377400 0.08377400 0.08377400 0.07699700 0.07699700 0.07699700 -0.68387000 -0.70505000 -0.73674000 0.00263410 0.01474700 -0.78378000 0.00000000 -0.65715000 -0.11273000 -0.11273000 -0.75001000 -0.26973000 -0.78833000 -0.78833000 0.000 0.000 0.000 0.000 0.000 0.000 -0.698 -0.705 0.000 0.628 0.000 -0.770 0.000 -0.739 -0.739 -0.113 -0.113 0.100 0.100 -0.062 0.677 -0.270 -0.788 -0.668 -0.668 0.100 0.100 -0.587 0.112 0.839 0.139 -0.698 -0.698 -0.241 -0.241 0.000 0.000 -0.717 -0.717 -0.270 -0.270 0.000 0.000 0.000 0.000 0.000 0.000 -0.698 -0.705 0.000 0.628 0.000 -0.770 0.000 -0.739 -0.739 -0.113 -0.113 0.100 0.100 -0.062 0.677 -0.270 -0.788 -0.668 -0.668 0.100 0.100 -0.587 0.112 0.839 0.139 -0.698 -0.698 -0.241 -0.241 0.000 0.000 -0.717 -0.717 -0.270 -0.270 7.8354037 -1.3015148 5.6172750 11.4160888 11.0468639 7.6840550 11.7740586 7.9549983 8.4872287 3.6984074 11.2493996 12.1246129 3.2833736 1.6983963 3.9463379 8.7249357 3.6984074 9.9762809 11.8424332 10.9605072 8.6641966 9.9510778 7.3422685 10.2491591 5.6291497 5.4797706 -0.3015148 NA 11.5577530 2.3988429 8.2796129 8.6453187 6.4057712 10.3700463 10.3204641 1.5057893 8.6423922 -1.3015148 6.2141131 11.5936089 8.5439026 5.7964446 NA 7.3314078 8.4830471 2.2833884 2.7858853 NA 3.8276971 3.9882484 2.6984185 10.2370864 0.6983963 9.1639787 10.1215282 9.8652031 2.9463379 9.7825563 12.4437716 8.3530484 1.5057893 2.8683312 10.1917674 1.6983963 -1.3015148 -1.3015148 1.0203422 13.912238 5.698413 9.178193 12.815162 9.487946 10.632840 12.889626 13.420152 9.310682 11.240932 12.451316 10.245307 9.984392 8.502543 1.698396 6.983814 12.735874 10.4169453 10.9722079 8.7550501 13.5480124 8.7805614 4.3708408 9.8205932 9.0907299 9.7952395 6.7645014 9.8321968 11.3523770 6.6756918 -1.3015148 10.8069368 3.9463379 9.2043430 10.4233525 9.6656386 10.5764633 8.4532999 9.3085145 14.4951871 5.1413551 13.1593296 9.4280331 10.0393752 10.1967629 11.3206930 9.9727906 11.0357555 10.2673186 9.7852120 1.2833884 8.9226192 5.3277700 11.1426508 5.3422703 11.8160554 7.0338029 10.3910279 10.1480769 8.1078667 12.6713904 10.5726253 10.2356307 13.1989431 10.3901558 0.2833292 -1.3015148 10.8023558 10.5890566 9.6526087 TCGA-D8-A1XB 62 0 NA 552 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 1 2 2 3 4 5 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 22.2222222222222 18.5185185185185 3.7037037037037 33.3333333333333 22.2222222222222 10.779815 10.917148 11.921576 10.038465 8.374873 9.052199 10.488055 9.698390 10.354863 13.771914 10.799935 10.932080 2.456018 12.627395 4.652406 9.854753 6.605757 8.536383 9.738326 12.723089 2.040963 13.170469 6.040971 9.511518 11.276188 6.876672 NA 9.266581 9.561045 4.263365 8.297312 8.085366 1.871055 4.915440 10.015068 10.191283 10.326888 12.697397 10.210340 11.674371 8.965125 11.300977 15.106014 9.217993 10.218114 12.060408 11.587009 4.777935 6.543473 9.467236 11.756362 NA 11.234360 6.963804 5.836831 5.020796 10.265509 12.081718 10.836470 12.274858 12.921831 8.183930 11.134609 10.879591 11.294163 11.403890 5.514902 11.681819 11.825243 -1.129103 10.494928 9.400477 3.859731 5.000329 11.032494 10.531488 10.490808 10.217006 3.915444 9.749864 13.337251 12.099865 10.168536 9.684026 0.6758600 0.6701100 -0.1173200 0.2134500 0.0274970 0.3307600 0.0000000 -0.4114600 0.3442100 0.3392200 0.3392200 -0.2007400 -0.2007400 0.0146090 0.0146090 0.0146090 0.0048579 0.0048579 0.0693820 -0.2012400 -0.2030900 0.1096400 0.1096400 0.1096400 -0.0058140 -0.0058140 0.0141900 0.1370200 -0.0256170 -0.0173910 -0.1734800 -0.1173200 0.0274970 0.0265140 0.3307600 0.3307600 -0.3466400 -0.4114600 -0.1547700 -0.1152100 -0.1065700 0.3442100 0.1348000 0.1348000 0.1348000 0.1841900 -0.2007400 -0.2007400 0.0146090 0.0146090 0.0146090 0.0146090 0.0048579 0.0048579 0.0048579 0.0693820 -0.2012400 -0.2012400 -0.2061000 -0.3033400 0.1096400 0.1096400 0.0440070 -0.0058140 0.0141900 0.1370200 -0.4000800 -0.1617900 -0.1617900 -0.201 -0.201 0.000 0.000 0.000 0.000 0.000 -0.201 -0.206 0.412 0.115 0.110 0.110 0.000 0.000 0.000 0.000 0.676 0.676 0.137 0.137 -0.400 -0.162 -0.186 -0.186 -0.117 -0.117 0.000 0.000 0.331 0.331 0.000 -0.119 -0.115 -0.115 0.339 0.339 0.135 0.135 0.000 0.000 -0.201 -0.201 0.000 0.000 0.000 0.000 0.000 -0.201 -0.206 0.412 0.115 0.110 0.110 0.000 0.000 0.000 0.000 0.676 0.676 0.137 0.137 -0.400 -0.162 -0.186 -0.186 -0.117 -0.117 0.000 0.000 0.331 0.331 0.000 -0.119 -0.115 -0.115 0.339 0.339 0.135 0.135 0.000 0.000 8.1284347 -0.1289449 4.6524062 10.5478854 10.9703946 6.6645525 11.7263046 9.0094337 7.8709904 2.4560176 10.9967831 10.8470093 3.1189743 4.0003336 4.0003336 9.2525897 2.9585086 9.9657843 11.4385276 10.9844634 9.4912667 7.0409713 8.2285989 9.9841377 5.7536901 4.2285955 2.0409625 NA 10.9749902 7.1189743 7.6880307 8.5989673 6.1839291 10.1899003 10.3482992 3.9585086 8.6703284 -1.1291027 8.1861965 12.7040357 8.5522852 7.4140789 -1.1291027 3.1929674 8.2482573 3.7290306 3.6259367 -1.1291027 3.3304724 6.1014988 3.3304724 10.3748726 0.4559650 8.3827995 10.4765263 9.6242636 3.3946102 9.0131538 11.7104474 6.8878554 2.4560176 3.0409801 11.3508271 1.4560176 NA -1.1291027 2.3304724 12.826544 5.425637 8.655682 12.627395 10.284675 10.777562 12.723089 12.355870 9.313503 11.182455 13.200983 10.313472 9.467236 10.729416 1.456018 7.398524 11.295476 11.662617 11.726694 7.452247 13.803584 9.124894 5.625934 8.966444 9.199722 10.812879 6.665462 7.649124 10.799935 6.691226 5.691227 11.204761 6.402429 7.223664 12.857778 10.263364 10.681618 8.350827 8.607449 13.185984 5.060873 12.677358 10.326888 10.112434 9.914074 11.354107 10.175398 10.771159 11.040659 9.624264 NA 9.572093 7.799713 11.756362 5.514902 11.234360 8.863985 10.684026 10.265509 8.274059 13.780424 9.861151 10.349311 13.030209 10.973022 NA NA 10.702750 10.466770 10.277783 TCGA-D8-A1XC 85 1 377 NA breast stage iiib t4b n1a m0 female 2010 NA no mucinous carcinoma 1 white not hispanic or latino NA NA 3 1 5 2 4 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 25.9259259259259 14.8148148148148 0 33.3333333333333 25.9259259259259 10.670052 10.150260 11.901770 10.313799 7.967061 9.009830 11.374017 9.770398 9.614488 14.079282 11.929881 10.968975 2.632315 11.524310 4.824956 9.317809 5.984826 8.114973 9.893061 13.975178 4.217269 14.198907 5.552875 9.264006 10.501352 8.983564 NA 8.614472 12.730436 4.657846 8.696860 6.907103 -0.175110 3.682933 9.779878 10.780968 10.172022 10.430434 10.490735 12.000660 14.640713 12.183194 14.897213 6.857221 10.646330 12.032884 11.787670 2.409907 7.225834 8.806522 9.633919 NA 11.013543 2.824951 3.217277 3.217277 10.753103 11.577753 10.060370 10.619370 12.897338 6.664159 10.537052 11.195914 11.349741 11.593966 5.234344 11.874463 12.721192 -1.174947 9.854242 8.493839 2.732812 4.284388 10.548616 9.879559 10.331262 9.958739 3.284381 7.796498 9.996757 10.831982 10.199994 9.036843 0.77118000 0.78736000 0.00194180 0.00541390 0.00332990 0.00041593 0.00069327 0.00069327 -0.00318590 -0.00318590 -0.00318590 -0.00484610 -0.00484610 -0.00318590 -0.00538110 -0.00538110 -0.00346270 -0.00346270 0.00305220 -0.00443120 -0.00885260 -0.01532900 -0.01532900 -0.01532900 -0.01725400 -0.01725400 -0.01725400 -0.01174900 -0.00636680 -0.00636680 0.00162750 0.00194180 0.00332990 0.00332990 0.00041593 0.00041593 -0.87829000 0.00069327 0.00750000 0.00000000 0.00000000 -0.00318590 -0.00733390 -0.00733390 -0.00733390 -0.00733390 -0.00484610 -0.00484610 -0.00318590 -0.00318590 -0.00538110 0.00263570 -0.00346270 -0.00346270 -0.00346270 0.00305220 -0.00443120 -0.00443120 -0.00885260 -0.00456950 -0.01532900 -0.01532900 -0.00055444 -0.01725400 -0.01725400 -0.01174900 -0.00124730 -0.01505400 -0.01505400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.771 0.771 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.772 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.771 0.771 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.2720377 NA 3.1468833 10.4136692 10.6759226 7.0888338 12.1270222 7.0784711 8.4082818 NA 10.3737764 11.0769635 9.2925600 3.8249511 3.4099204 8.0846979 4.0344094 10.4066258 11.4771273 11.2923054 9.3057446 NA 7.2385824 9.8249544 4.8693483 0.8249715 2.8249511 NA 10.7163585 5.2172734 4.8473205 8.3891038 2.9124199 10.7386854 10.8525150 3.6829328 7.8333829 -0.1751100 6.6891412 12.6004619 8.0465418 7.1057252 NA 2.1468833 7.9998800 NA 1.4099068 -1.1749471 -0.1751100 5.8788259 -1.1749471 10.2501704 NA 5.3485157 10.5630468 9.3900565 3.6323148 9.4849503 11.4262610 7.2595823 0.4099068 2.4099068 12.4367862 1.9948693 -1.1749471 1.8249715 0.4099068 13.6875032 3.3485157 8.8022346 11.5243101 10.3198101 10.4960532 13.9751778 13.6182530 8.9137427 11.1063050 12.8975896 11.1355673 8.8065219 6.3168083 0.8249715 7.1868987 11.5434874 10.7849565 12.4641821 8.7849564 14.1415878 8.9580968 1.1468507 8.4920659 8.3891038 10.3766868 5.9229875 9.0295258 11.9298808 7.0585741 NA 11.2151235 7.2761654 7.4512111 9.0344078 10.2284992 10.8344333 8.3543852 8.4831660 12.5517048 1.9948693 11.3895732 10.1720221 10.4127320 9.8389749 12.2139135 8.9606637 10.1934609 10.7003199 9.6852657 NA 9.0613396 9.9402063 9.6339187 0.4099068 11.0135434 5.1468833 10.9167270 10.7531027 7.4359794 13.3615660 10.2097382 10.2172719 13.2699694 9.7333471 NA NA 10.8118631 10.9229866 10.1120897 TCGA-D8-A1XD 36 0 NA 522 breast stage iiia t1c n2a m0 female 2010 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 1 5 2 2 1 1 3 4 4 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.6658479 10.2155618 12.3549212 10.3760823 7.8510956 7.2245536 11.8944957 9.8646930 9.7550687 14.1433474 11.3538369 11.0167639 4.0546314 13.2961730 3.8510994 8.7638033 6.7839817 8.7225808 7.9716085 12.9712941 2.1286233 13.6966330 5.2985557 9.3232681 11.7032230 3.8510994 -1.1933047 9.7337385 9.0112725 2.6140502 7.8095161 8.1173143 0.8066953 3.9359877 10.3698976 9.9822509 10.0938365 11.4061493 10.4314968 11.8409845 12.2102460 11.7895167 15.2185102 8.4602810 9.9690864 12.0106610 12.0689431 4.3916646 6.5481684 9.7839812 11.0549254 3.0546228 11.0842794 9.0270797 4.0921059 5.0546271 9.1587447 12.1325689 10.4369685 12.5050805 13.1265146 7.5209471 11.1373382 10.9001387 11.8354708 11.5717802 5.7492151 12.0781644 13.2835108 -1.1933047 10.2702257 9.1620524 3.9786258 3.0546228 10.7648916 9.8687476 10.4378784 10.1801103 3.9766294 9.7989317 12.5082244 10.6958250 10.8304557 9.6654594 -0.00069303 -0.00069303 0.00180300 -0.00342010 0.00221930 0.00000000 0.00124810 0.61407000 3.34840000 3.65690000 0.67734000 0.00110930 0.00110930 0.00805670 -0.00346410 -0.00346410 0.11448000 0.11448000 -0.64274000 0.00708260 0.01042400 -0.00392010 -0.00392010 -0.00392010 -0.01340200 -0.01340200 3.65690000 2.16990000 0.01070300 -0.00069303 -0.00622860 -0.00342010 0.00221930 0.00221930 0.00000000 0.00000000 0.00736090 0.00055459 -0.00705760 0.00000000 -0.00620550 -0.65752000 -0.00885260 -1.29290000 -0.63273000 -0.62570000 0.00110930 0.00110930 0.00805670 -0.00346410 0.00750000 0.00750000 0.11448000 0.11448000 0.11448000 -0.64274000 0.00708260 0.00708260 0.01042400 -0.00027724 0.00652620 -0.00392010 0.01126100 -0.01340200 -0.59808000 -0.63045000 0.70495000 -0.62627000 -0.62627000 0.000 0.000 0.000 0.000 0.114 0.114 -0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.664 -0.626 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.658 0.000 -0.626 -0.626 0.000 0.000 0.000 0.000 0.000 0.000 0.114 0.114 -0.642 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.664 -0.626 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.658 0.000 -0.626 -0.626 0.000 0.000 7.9816272 NA 4.8510944 10.7210865 10.7656165 8.2581599 10.4936395 8.3753988 8.1129227 0.3916578 10.4826583 9.9455107 2.8066953 -1.1933047 2.5071350 9.0063738 2.6140502 8.2454933 11.3810584 10.2059793 8.2350617 3.6646876 7.9020983 9.8297625 5.4214118 3.9766294 2.2661269 NA 10.4751432 8.6268804 7.7195907 8.5226635 7.5582454 11.2859941 10.6596209 2.5071350 9.9640483 -0.1933047 7.5481684 11.6210835 8.8165300 6.6395911 NA 3.1990127 7.2371535 2.3916578 2.2661269 0.3916578 2.8941581 5.4649133 2.2661269 10.2527508 3.3302572 7.7811157 10.2413296 9.7803987 2.6140502 7.9539060 11.2684366 6.6395911 1.3916578 4.1642553 11.1960638 3.3916578 -1.1933047 2.7135858 1.9766203 14.530705 4.976625 8.487940 13.296173 9.283447 10.065856 12.971294 12.027986 9.427837 11.398457 12.417034 10.537172 9.783981 8.979129 NA 7.551535 14.077252 10.757622 12.505515 6.298554 13.956485 8.987853 4.266134 9.581488 9.167548 10.189012 5.199021 9.051065 11.353837 5.601117 4.894163 11.416803 5.376558 8.343784 13.128629 10.502365 10.457304 8.546482 9.578191 13.784652 5.520947 12.325087 10.093837 10.334667 10.088052 11.478685 9.898137 10.990647 10.105909 9.864016 NA 9.481838 6.795386 11.054925 5.216094 11.084279 8.803881 10.127502 9.158745 7.946252 13.351485 10.398224 9.962784 12.274816 11.637811 NA 3.128623 10.676681 10.858930 9.484421 TCGA-D8-A1XF 45 0 NA 463 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 2 5 2 1 1 5 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 3.467973e-07 37.1428571428571 8.57142857142857 5.71428571428571 34.2857142857143 14.2857142857143 10.66797770 9.56591661 11.78374090 10.69011665 8.56392001 8.48872708 10.15464346 10.59912137 9.83680055 14.49415486 11.86505081 11.31777093 -1.51704849 12.97639493 2.87542623 9.36498098 6.65302705 8.60722377 9.04247937 12.99750821 -0.51684205 14.05896655 1.48310634 8.73340078 12.05651285 6.96691837 0.48305474 9.70227088 5.05295924 2.57056008 9.29447716 6.73576721 1.48310634 5.27751989 8.64549380 9.35731535 9.45823373 10.22077226 9.68277465 11.84833120 2.48310634 10.94483759 14.17642596 10.37166678 9.45895037 11.15927982 11.95401538 4.92604687 6.53838451 9.17135271 9.60398827 -1.51704849 10.24506907 3.23799194 4.63284983 4.00666606 11.38000232 11.75762611 9.72270082 12.24049236 12.85759851 7.68031873 11.24382228 10.93247285 11.15574866 11.51307972 5.40589368 12.06512669 11.68736781 NA 9.27507924 10.60754679 2.39478850 3.52749577 10.29848569 10.87970714 11.18873471 11.24195015 0.06805164 9.63030736 9.68216120 10.00764403 9.90253596 8.61238531 1.15890000 0.81642000 -0.00027724 -0.00027724 0.43142000 -0.48302000 -0.00041585 -0.47902000 3.65690000 1.90780000 1.92090000 1.19390000 -0.46664000 0.79529000 3.65690000 1.52690000 0.00000000 0.00000000 0.40644000 0.43598000 -0.44566000 -0.46334000 0.42671000 0.42671000 -0.01958900 -0.01958900 -0.01958900 0.39280000 -0.43940000 -0.46345000 -0.02809800 -0.00027724 -0.48428000 0.43142000 -0.48302000 -0.48302000 -0.00041585 -0.47902000 -0.47902000 0.41831000 0.41915000 -0.03884400 0.40411000 0.40411000 0.40411000 0.41452000 -0.46706000 -0.46706000 0.79529000 -0.45018000 -0.47913000 -0.47913000 0.00000000 0.00000000 0.00000000 0.40644000 -0.45982000 0.43007000 -0.44566000 0.41898000 -0.46334000 0.42671000 -0.00774820 -0.01958900 -0.01958900 0.39845000 0.86632000 -0.02109800 -0.02109800 0.727 -0.467 0.316 -0.479 0.000 0.000 0.406 0.430 -0.446 0.419 0.419 -0.463 0.427 0.000 0.000 0.000 0.000 -0.463 0.353 0.393 0.393 -0.486 0.000 0.405 0.000 0.000 0.000 -0.053 0.431 -0.483 -0.483 -0.479 -0.479 0.418 0.418 1.908 1.908 0.404 0.404 0.000 0.000 0.727 -0.467 0.316 -0.479 0.000 0.000 0.406 0.430 -0.446 0.419 0.419 -0.463 0.427 0.000 0.000 0.000 0.000 -0.463 0.353 0.393 0.393 -0.486 0.000 0.405 0.000 0.000 0.000 -0.053 0.431 -0.483 -0.483 -0.479 -0.479 0.418 0.418 1.908 1.908 0.404 0.404 0.000 0.000 7.1341542 NA 4.1269563 10.0567496 11.7843127 6.0168996 11.0832475 8.2552189 7.9568082 0.8050448 10.6992419 10.4715634 4.3899935 -1.5170485 3.9093699 8.1341542 2.8050241 9.1368432 12.5019980 11.1926170 10.1528732 1.8050448 7.1904618 8.8296162 6.2710054 1.4831063 1.9425333 NA 9.5349911 6.6175292 3.9425333 9.8168168 3.3899935 10.7830630 11.0295145 1.8050448 9.9374016 NA 5.8581427 12.2254118 9.1142793 7.9093669 NA 1.6530141 8.5877010 NA 1.0680516 -1.5170485 2.4831063 1.6815842 3.2379919 10.9532528 NA 6.0222613 10.7566066 9.9719467 3.3410891 7.6630115 13.0839445 6.7404905 3.8406546 0.4830547 11.0617109 6.4717874 NA 4.6925555 -1.5170485 16.726519 5.805029 8.353467 12.976395 10.485896 10.449247 12.997508 12.444009 10.543798 11.062183 12.482398 11.782883 9.171353 7.251286 2.805024 7.428546 12.436571 11.673236 12.169165 6.905167 12.409861 7.793715 3.068069 9.997323 10.628398 11.012347 4.290454 10.806439 11.865051 6.754566 -1.517048 11.546160 4.892493 10.137237 11.292067 9.143990 11.328396 8.351925 10.282384 11.155528 7.627761 10.902957 9.458234 9.290457 9.733993 11.666428 10.230037 10.703783 10.835146 9.553894 -1.517048 8.904704 4.468375 9.603988 7.938429 10.245069 5.612385 11.286224 11.380002 7.834042 12.821003 9.500607 9.310445 12.261693 11.129436 1.483106 3.420914 10.354238 10.739901 10.188303 TCGA-D8-A1XG 86 0 NA 448 breast stage iiib t4b n1a m0 female 2010 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 2 5 2 2 1 1 3 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 23.8095238095238 14.2857142857143 4.76190476190476 38.0952380952381 19.047619047619 11.1053013 10.4113374 11.2405927 9.7498058 8.3369269 9.2359730 9.9904149 10.2689086 10.0500545 14.1612235 11.5047412 11.1482210 0.2144979 11.4573075 5.1053009 10.1793526 6.6956570 7.8703592 10.0516326 13.7663187 1.2145600 13.7597764 6.7223253 9.4942880 10.6702001 8.8845964 0.6295665 8.2461168 9.9270573 3.4875507 8.4369226 8.6309762 NA 3.3844505 10.1984740 10.7585288 10.0368356 10.4150203 10.3579136 11.8618389 13.8360862 12.5211617 15.4681809 8.0867843 9.5446705 12.1593644 12.0983191 4.6739634 8.2405924 9.3317406 10.8304665 -0.3703403 11.0992096 4.1841533 4.7170293 4.0218883 10.4272293 11.5919217 10.2387466 11.5445135 13.0509095 8.3574882 11.0234945 11.0451406 11.5554931 11.3581262 5.5720832 11.7732700 12.2396699 NA 10.2178140 8.9481108 3.0896507 4.6956598 10.3156306 10.7087193 10.5281693 10.0320470 4.4624581 9.4231712 10.8175384 10.8175384 9.9660744 9.0089462 1.83360000 1.93670000 0.01237600 0.01151000 -0.75866000 0.01642500 0.00722170 0.00722170 -0.01003600 -0.01003600 0.00464420 -0.00152430 -0.00152430 -0.00077791 -0.00077791 -0.00077791 0.00208050 0.00208050 0.01140000 -0.20223000 -0.01670400 -0.03476800 -0.03476800 -0.03476800 -0.04807200 -0.04807200 -0.04807200 -0.03176800 -0.79116000 -0.75892000 0.00000000 0.01237600 -0.79125000 -0.75866000 0.01774300 0.01774300 0.00722170 0.00722170 0.00722170 0.00708260 0.00708260 0.00263570 0.00480240 -0.00401620 -0.00401620 -0.00401620 -0.00152430 -0.00152430 -0.01670400 -0.00077791 -0.00077791 -0.00077791 0.00208050 -0.75564000 -0.01752900 0.01140000 -0.20223000 -0.20223000 -0.01670400 -0.01271300 -0.03476800 -0.03476800 0.00471900 -0.04807200 -0.04807200 -0.03176800 -0.00995650 -0.02931100 -0.02931100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.772 1.158 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.759 -0.759 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.772 1.158 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.759 -0.759 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.3019932 NA 4.0218883 10.6365951 10.9146810 6.9321155 12.4011605 9.6108639 8.9133972 NA 10.7308870 10.8410790 6.1294129 4.0558290 3.7170348 8.1937175 3.6739634 10.1545992 11.7559497 11.8187747 9.3300075 NA 7.6956570 10.1017509 5.4497462 3.7170348 2.5364508 NA 10.9198748 3.0218883 6.2442782 8.1899006 5.0889981 11.3354724 11.2257576 5.7275992 8.4256074 -0.3703403 7.1413204 12.4376270 9.4734888 7.6657417 -0.3703403 0.9515132 8.7614249 4.5603053 3.4875507 NA 0.9515132 4.2202293 1.6295665 10.1462529 0.2144979 9.7236456 10.6722532 9.9276304 3.3844505 9.0621098 12.7047963 7.5364586 2.2145290 1.9515132 13.0651730 3.0218883 -1.3703403 2.7170348 0.9515132 14.296531 3.987121 7.076651 11.457308 10.477224 11.245427 13.766319 12.555771 9.539461 11.258469 13.420425 10.632383 9.331741 8.260745 2.436935 7.606848 11.912946 10.843280 12.382576 8.284204 13.119915 8.105301 4.214529 8.644983 8.902198 9.965650 7.360887 9.569147 11.504741 6.391120 7.606848 10.907146 9.004607 7.672677 13.237823 9.660235 11.293348 8.125423 8.765277 12.434102 2.799502 11.544734 10.036836 10.423171 9.749806 12.097046 9.845707 9.573548 11.089768 9.895769 NA 9.225842 7.003651 10.830466 1.799502 11.099210 6.877495 10.966172 10.427229 7.157045 12.815295 9.505317 10.227155 12.898475 9.967190 NA -1.370340 10.086949 10.908017 10.429254 TCGA-D8-A1XJ 76 0 NA 664 breast stage iiia t3 n1a mx female 2010 NA no other, specify 2 white not hispanic or latino NA NA 4 2 5 1 2 2 2 8 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.768666e-06 6.242351e-07 31.4285714285714 37.1428571428571 2.85714285714286 20 8.57142857142857 8.9412977 9.8086600 11.1881055 9.4410848 8.2324147 8.7998897 9.8658039 10.2649971 10.6536853 13.4987121 11.8527891 10.5586818 0.2723816 17.7901071 3.9162664 10.0825827 4.4221590 8.1473942 7.0668287 12.9121491 1.4423331 12.3555596 5.0668297 9.4004071 11.2162096 3.7318458 -1.7273795 8.3398473 11.1470099 1.2724413 8.0372845 8.4976203 -1.7273795 4.1793040 10.8274812 10.4846051 9.6679469 9.4010517 10.4653220 10.8205121 4.5761956 9.6349045 15.6056817 7.8012964 10.2978985 9.6754248 11.2641117 3.6299627 3.4818672 9.0660160 11.4560481 1.2724413 11.2787388 5.3058356 5.1303955 4.9306238 9.0011835 11.8807831 10.1569649 11.3725823 12.8227387 7.7420547 10.5534734 10.2907138 11.0383204 10.9626291 4.6299627 12.7498548 10.6247321 -1.7273795 10.0277176 9.0973714 2.8239327 4.4423398 11.4023397 10.2674732 9.5333323 9.8917157 4.8871207 10.5499908 13.0501818 11.0399766 10.1307824 9.1210356 1.895200 0.154570 -0.241560 0.443760 -0.629410 -0.212060 0.482710 0.482710 -0.461420 0.076135 0.662860 0.063223 -0.249580 -0.245940 0.142360 0.142360 0.140580 -0.640380 0.118880 0.099579 -0.253220 -0.583630 3.656900 -0.633010 0.133320 0.133320 0.133320 1.298500 -0.656960 0.150990 -0.232760 -0.241560 -0.304280 0.000000 -0.601190 -0.029584 0.495970 0.482710 0.543650 -0.062495 -0.670580 -0.946710 -0.052936 -0.056307 -0.056307 -0.024935 -0.249580 -0.249580 -0.243750 0.142360 0.142360 0.142360 0.140580 -0.637180 -0.637180 -1.233600 0.099579 0.099579 1.787400 0.167750 -0.640290 -0.633010 -0.527670 -0.236920 0.133320 -1.054100 -0.139490 0.149050 0.149050 0.000 -0.250 -0.101 0.142 0.141 0.141 0.117 0.000 -0.253 0.198 0.198 -0.633 -0.633 -0.528 -0.528 0.133 0.133 0.151 0.151 -0.202 -0.202 0.552 0.149 -0.217 -0.217 -0.242 0.202 -0.304 -0.304 -0.212 0.000 0.483 0.483 0.000 0.000 -0.947 0.000 0.000 0.000 0.337 -0.106 0.000 -0.250 -0.101 0.142 0.141 0.141 0.117 0.000 -0.253 0.198 0.198 -0.633 -0.633 -0.528 -0.528 0.133 0.133 0.151 0.151 -0.202 -0.202 0.552 0.149 -0.217 -0.217 -0.242 0.202 -0.304 -0.304 -0.212 0.000 0.483 0.483 0.000 0.000 -0.947 0.000 0.000 0.000 0.337 -0.106 8.1241616 7.2178569 6.9054075 10.2262454 11.0576609 5.1522402 11.7421818 8.7840766 7.6164422 NA 13.6835927 11.2629245 -0.1425763 NA 2.0797706 8.1550560 3.3168119 9.9501324 11.8686025 10.3939463 9.7532030 4.8115738 7.4322838 9.5767642 6.5716207 2.7318349 0.8573441 NA 10.6192035 6.9900892 6.8231596 8.9008584 7.3411914 9.8415469 10.0318849 -0.1425763 9.3887567 NA 7.9814965 12.7115943 5.5761926 8.3017001 NA 2.7318349 7.1489300 0.5943575 3.2724114 NA 2.4423331 5.6142210 -0.1425763 11.8252019 2.7318349 7.1882921 10.9617556 9.3835484 2.9728580 9.0314688 12.0295944 8.1853021 0.2723816 3.5943455 9.7542122 3.5578144 -1.7273795 3.7318458 4.4818672 12.3004172 8.2511231 7.5670335 17.7901071 10.4592977 11.1068838 12.9121491 11.9234645 9.0981824 11.0180535 13.5224521 9.8284398 9.0660160 7.2975528 0.8573441 6.3861557 11.9628473 11.328034 12.428338 4.698680 14.202872 9.130394 3.079771 8.060315 9.288525 10.575320 5.249692 5.432285 11.852789 8.703910 5.105301 10.585579 8.951013 8.373141 11.091394 10.005004 11.334628 8.442338 8.180805 10.373075 3.316812 10.554340 9.667947 9.992229 10.269592 11.298936 9.836562 11.276633 10.726455 9.519153 7.534508 9.991930 10.698848 11.456048 3.226616 11.278739 8.040597 9.849568 9.001184 8.122756 14.015865 9.703388 10.585863 12.212543 10.711205 NA 4.872326 10.742563 10.765768 8.924362 TCGA-D8-A1XK 55 0 NA 441 breast stage iib t2 n1a mx female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 4 4 5 1 5 5 2 7 5 1 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 4 0 0 0 5 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.129335e-05 7.074665e-06 8.40336134453782 3.24129651860744 1.92076830732293 15.9663865546218 70.46818727491 9.7270091 9.3474340 11.1935253 8.9505238 9.0373344 9.1206246 7.9377987 10.6317101 9.8551955 11.4215699 10.1220315 10.9176883 0.4411647 11.2680108 1.9265688 9.7725096 7.3576215 8.1262440 9.2484995 5.1636114 NA 8.4985947 8.0155489 9.3458454 10.5091167 4.3090379 -0.2958363 8.9568367 12.0908499 3.2891410 7.9473529 9.3689226 1.1192234 4.2484969 10.1738209 11.1032789 9.5611233 8.5179603 9.7778743 10.6615229 0.1191569 8.3895117 13.7603369 9.5031583 9.9217330 11.0831963 10.0763186 4.9895796 -1.8809759 9.6938101 12.5593720 1.2891262 9.9658822 6.0907603 7.2941419 5.9709664 8.9193076 12.4848555 10.6180657 11.0412434 12.9508207 6.9988003 11.0005218 11.0208434 11.6861030 10.9989912 5.3576224 12.5495384 6.5072333 NA 10.8640504 10.1680439 3.8290580 4.4767705 11.6303515 9.9341995 11.7648749 9.4866313 -0.8807102 6.7738526 12.7913656 12.0352826 10.4679447 9.1192166 0.2791600 0.5654300 0.3611700 0.7848500 0.3175500 0.3188300 0.3684900 0.3553600 0.3079300 0.3079300 0.3081300 0.9000900 0.0947820 0.1767900 0.2165300 0.1713600 0.3335100 -0.3648800 -0.3659000 -0.3654400 1.2181000 -0.3832500 -0.3680400 -0.3623800 0.0875340 0.0875340 0.2845300 0.3455100 -0.3450400 0.2791600 -0.0089906 -0.3598800 -0.3782000 -0.3626100 -0.3826900 -0.3559200 0.0181030 0.3553600 0.0425900 -0.4077100 -0.3969700 0.2880200 1.0814000 1.1003000 -0.1827000 0.0000000 -0.3714400 -0.6477100 -0.3606800 0.2165300 -0.3614700 0.1563600 -0.3689500 -0.3648800 -0.3648800 -0.3493900 -0.3729000 0.1980100 -0.7485500 -0.1753700 -0.3832500 -0.3528200 0.0767100 0.0875340 -0.3753800 -1.1760000 0.2883400 -0.3834700 -0.3741400 0.000 0.000 0.156 0.156 -0.365 -0.365 -0.349 -0.365 -0.100 0.000 -0.168 -0.362 -0.362 0.000 0.000 0.000 0.000 0.279 0.000 -0.368 -0.368 0.337 -0.374 0.000 0.000 -0.126 0.233 -0.361 -0.361 -0.365 -0.365 0.286 0.286 -0.341 -0.341 0.308 0.308 0.132 0.000 0.000 0.000 0.000 0.000 0.156 0.156 -0.365 -0.365 -0.349 -0.365 -0.100 0.000 -0.168 -0.362 -0.362 0.000 0.000 0.000 0.000 0.279 0.000 -0.368 -0.368 0.337 -0.374 0.000 0.000 -0.126 0.233 -0.361 -0.361 -0.365 -0.365 0.286 0.286 -0.341 -0.341 0.308 0.308 0.132 0.000 0.000 0.000 9.0914785 7.7246960 5.4046171 10.7018289 11.2397784 5.7171198 10.3695149 10.7194337 8.1308773 -0.8807102 13.4805435 10.3765867 1.5786489 NA 3.3671474 9.2860074 3.4767705 9.9373993 11.9949659 11.1202728 9.9156618 -1.8809759 10.4506934 9.5470532 5.6738051 4.5286088 0.4411647 0.1191569 10.7302414 3.0261095 7.9265712 9.2966361 5.8196554 9.5676736 11.2991256 1.1192234 9.9497317 4.4046171 7.2093286 12.3085778 7.7228430 7.6388529 0.1191569 1.9265688 7.6544921 1.4411647 NA -0.8807102 5.7191287 1.9368546 8.1415845 12.0321994 2.0260918 9.1812626 10.8615260 9.5704276 4.4411448 9.8008942 14.1280172 9.1866508 3.9005770 2.5115439 9.8715971 -0.8807102 5.9584205 0.4411647 6.9393959 11.274147 9.456838 7.974085 11.268011 8.974085 11.190176 5.163611 8.083558 9.795976 11.279876 13.758416 11.222668 9.693810 8.240750 1.119223 7.936200 10.668520 10.701123 11.419426 4.939396 14.477507 9.472915 6.185306 8.976420 8.277826 9.689447 6.141584 4.268966 10.122032 11.889261 8.583762 10.899961 10.124139 9.714884 11.663819 9.908750 10.515018 4.185304 9.069043 9.748573 6.923348 10.193017 9.561123 9.740811 10.099356 12.090311 10.705118 12.468152 10.622297 8.988810 NA 8.728201 8.116396 12.559372 8.261323 9.965882 7.961567 11.884065 8.919308 7.809354 14.473328 10.326231 10.499678 13.085001 11.234748 2.289156 NA 11.103279 10.087163 9.616569 TCGA-D8-A1XL 34 0 NA 606 breast stage iib t2 n1a mx female 2010 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 4 1 1 2 7 4 2 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.53162e-06 2.774378e-07 12.3456790123457 16.0493827160494 0 40.7407407407407 30.8641975308642 9.062688 8.062688 11.054305 6.693176 9.953327 9.339449 9.591401 9.638146 10.629708 13.285230 10.924181 10.423213 1.309467 13.912170 1.894449 9.572740 7.281015 8.743056 10.798566 12.220582 -1.690591 13.897542 6.509143 9.431348 10.706611 8.121649 1.116830 12.986424 10.456358 -1.690591 7.489380 5.953328 NA 4.833032 9.234284 9.890201 8.959625 9.924641 8.571566 10.350446 2.701793 10.850084 13.647476 4.547110 9.764284 10.202393 9.933810 4.499297 3.167454 8.873621 9.856848 NA 10.848872 5.154960 6.077655 5.037391 8.601793 11.883000 9.735736 10.762742 12.593862 6.640388 10.509450 10.023382 10.066861 10.112795 2.894430 11.976583 11.916223 3.009902 10.301347 9.503612 1.294959 4.848628 11.127254 9.751896 10.768647 8.906593 6.129650 5.192115 11.903446 12.246477 10.366447 9.106322 0.7457500 0.5707700 -0.4364800 1.1737000 -0.0418380 0.3662500 0.3971200 -0.4211200 -0.4673800 -0.4673800 1.4507000 -0.0187650 1.1508000 0.6131700 -0.0164290 -0.0164290 -0.0045695 0.5940400 -0.4507200 0.4373300 -0.4370800 -0.4417800 0.4099400 -0.0019399 0.0168530 0.0168530 0.0269350 0.3851800 -0.2750000 -0.0168410 -0.0380340 -0.4364800 -0.0418380 -0.8500300 -0.4262600 -0.4262600 0.3971200 -0.4211200 -0.4211200 -0.0139530 0.4124500 -0.8827100 0.3395000 0.3395000 -0.0018014 0.3341500 0.3807200 0.8619500 0.2942100 -0.0164290 -0.0164290 0.3167500 -0.0045695 -0.0180780 -0.0180780 -0.7806600 -0.1785300 -0.4257100 -0.4552200 -0.2828700 -0.4417800 0.3464800 -0.6465000 -0.4495400 0.0269350 0.3909800 -0.4202500 -0.0047079 -0.5057100 0.000 0.381 0.000 0.000 0.000 0.000 -0.781 0.308 -0.428 0.104 0.000 -0.026 0.416 -0.171 -0.171 0.000 0.000 0.000 0.000 0.391 0.391 -0.420 0.000 0.366 0.000 -0.436 0.283 0.000 0.000 0.366 -0.060 0.397 -0.397 0.423 0.000 0.568 1.451 0.312 0.312 0.000 0.000 0.000 0.381 0.000 0.000 0.000 0.000 -0.781 0.308 -0.428 0.104 0.000 -0.026 0.416 -0.171 -0.171 0.000 0.000 0.000 0.000 0.391 0.391 -0.420 0.000 0.366 0.000 -0.436 0.283 0.000 0.000 0.366 -0.060 0.397 -0.397 0.423 0.000 0.568 1.451 0.312 0.312 0.000 0.000 8.4503011 NA 5.8251700 11.2027727 12.4709180 6.8520775 11.3787531 6.2152185 8.8368895 1.3094673 12.3423778 11.6286225 6.5334730 2.1168305 0.3095255 8.3795919 4.1921152 12.1832997 11.5120542 10.5109825 10.7346871 2.0099204 8.9433746 9.9933431 7.5550239 0.3095255 0.3095255 NA 9.4419708 3.5189253 4.7188602 8.0012145 3.8944298 11.2052131 10.0412145 4.7852053 9.4061863 -1.6905910 5.1921152 12.4835386 8.1184355 6.8291075 -1.6905910 3.6313954 8.4554033 7.5478762 1.1168305 NA 7.2924643 3.5672412 3.9818983 11.3780815 2.1168305 5.5762591 11.0151035 10.1192393 5.7524141 10.6869529 14.5766968 9.0280041 5.7188630 5.1168263 10.6336517 1.3094673 NA 0.8944492 1.3094673 10.993126 6.949716 8.557399 13.912170 9.777077 11.056825 12.220582 9.094106 8.542276 10.157312 13.353524 12.776121 8.873621 9.110371 3.864057 8.427114 9.431652 11.072891 11.465396 6.370168 13.175637 9.083435 6.772995 9.565680 9.042486 10.203084 7.797311 5.631398 10.924181 8.295313 NA 9.038242 7.213353 8.471170 9.334611 10.171333 9.676340 8.099005 9.876001 5.981896 7.516486 11.696626 8.959625 11.159267 10.373203 9.558585 8.989831 10.273812 10.536485 7.016831 3.594871 9.459498 7.412182 9.856848 8.006439 10.848872 4.768904 11.142361 8.601793 7.044181 14.127479 10.638146 10.523487 12.225631 10.795552 6.407504 1.768883 9.653767 8.813297 9.527429 TCGA-D8-A1XM 57 0 NA 538 breast stage ia t1c n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 5 6 2 4 4 3 8 NA NA 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1.213791e-06 4.508365e-07 33.3333333333333 41.6666666666667 0 12.5 12.5 10.90993103 10.52541549 12.24641803 10.31514718 8.48749238 9.27364316 10.44172291 10.15218583 9.37510353 13.61544218 10.59200164 11.14883855 1.88440255 13.59848812 3.66200036 9.58582617 5.11046347 8.60451802 9.61522997 13.00999392 3.63162817 13.62122066 4.41689377 9.02963674 10.82774798 8.76091285 0.07710624 11.92488041 10.08441883 3.07703786 7.15919018 8.03704281 -1.92303052 3.85839882 10.14816818 9.83900769 9.77748070 11.86443349 8.51583306 11.20873726 1.53645083 10.37453049 14.59272547 8.35197808 9.26622926 11.33545986 12.29930766 4.32496897 3.16449668 9.51323194 11.21755130 NA 11.54069314 7.18556529 7.06572524 5.48643121 10.92174679 11.81079786 10.77139893 12.31208293 13.05485758 8.38196250 11.41563816 10.72840448 11.52515735 11.38623316 5.62393415 12.33059310 11.31887526 -0.33806802 10.43184137 9.33265983 3.03449746 6.81513348 10.17441478 10.34762834 10.46532743 10.05253083 5.26686523 9.22169925 12.75762033 11.85151927 10.27179787 8.91781899 0.45939000 0.45939000 0.00305220 0.00305220 0.00666530 -0.01579600 0.00444110 -0.49746000 0.00194180 0.00194180 0.00194180 -0.00097017 -0.00097017 -0.00415460 -0.00497280 -0.00497280 -0.49726000 -0.00027724 0.00680440 -0.00166290 -0.00733390 0.44494000 0.44494000 0.44494000 -0.01367700 -0.01367700 -0.01367700 -0.00650500 -0.00774820 -0.48397000 -0.00636680 0.00305220 0.46263000 0.00666530 0.00000000 0.00000000 0.00444110 -0.49746000 -0.01188700 0.00513590 -0.50108000 -0.51300000 0.00763920 -0.00924420 -0.00924420 -0.00924420 -0.00097017 -0.00312460 -0.00415460 -0.00497280 -0.00497280 -0.00497280 -0.49726000 -0.00027724 -0.00027724 0.00680440 -0.00166290 -0.00166290 -0.00733390 -0.01560400 -0.50888000 0.44494000 0.00555290 -0.01367700 -0.01367700 -0.00650500 0.00610900 -0.51197000 -0.51197000 0.000 0.000 0.000 0.000 -0.497 0.000 0.000 0.000 0.000 0.000 0.000 -0.064 0.445 0.000 0.000 0.000 0.000 0.000 0.459 0.000 0.000 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.486 0.000 0.000 -0.513 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.497 0.000 0.000 0.000 0.000 0.000 0.000 -0.064 0.445 0.000 0.000 0.000 0.000 0.000 0.459 0.000 0.000 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.486 0.000 0.000 -0.513 0.000 0.000 0.000 0.000 0.000 8.0514559 NA 5.7705278 10.3270433 11.6118302 6.7672138 10.5738948 9.3438744 8.4358132 4.2267859 11.6125594 11.3120979 1.5364508 2.8319380 3.7209023 8.1228006 4.2469629 10.4082379 11.6095187 10.9168353 9.1966306 5.6843727 8.7181897 9.9981381 7.4607450 8.9680651 0.6620232 -1.9230305 11.1493412 5.3154467 6.8616763 8.2532140 6.0826664 9.8587286 10.8102683 5.6468971 8.3554903 NA 8.3367841 12.1016613 8.0896655 6.5608571 NA 2.0770379 8.3682118 4.8452241 3.2469705 NA 6.5158323 6.2643938 3.9099267 10.1180156 NA 8.6054951 10.2659389 9.9981381 4.7912879 10.3411903 13.6824337 9.9884330 3.4693520 4.7912879 10.5215383 1.7774934 -1.9230305 1.3989523 2.6006028 13.5238210 6.2063248 8.4980538 13.5984881 10.2626598 10.8187187 13.0099939 12.1281650 9.1998691 10.7611322 13.3484311 10.1004489 9.5132319 10.5142729 -0.9230305 7.7370371 12.3479203 11.346314 11.711398 6.858401 13.604059 8.564881 6.787848 8.809208 9.457502 10.584826 7.706398 7.988433 10.592002 6.438985 5.110463 12.060302 6.900408 7.341109 12.924637 10.797072 10.824814 8.307061 8.954325 12.644522 7.110465 11.288945 9.777481 10.221062 9.721799 11.855221 10.068208 11.412152 10.605983 9.853063 NA 9.758284 6.998465 11.217551 6.756522 11.540693 7.864944 9.951638 10.921747 7.864944 13.095546 10.242890 10.292271 13.664086 10.676024 4.536476 -0.338068 11.108398 10.896222 10.116303 TCGA-D8-A1XO 56 0 NA 1682 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 2 1 2 2 4 1 5 4 4 3 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 2.080784e-07 17.6470588235294 35.2941176470588 0 23.5294117647059 23.5294117647059 10.7782299 10.3542323 11.1777820 10.4741700 8.3885439 9.7789169 10.0709603 9.9570091 9.3489990 12.1726507 11.3643371 10.5066040 1.7422650 12.6876682 3.8577621 8.8689898 6.5877760 7.8119590 10.8038815 12.6667886 1.6167341 13.8234636 5.6887035 9.5684948 10.3557679 6.1460075 -1.8426975 10.3042701 8.0059456 2.0642276 8.6126500 7.6828436 -0.8426975 4.4241092 10.3804195 10.3489990 10.5402170 12.9256105 10.9188740 12.0298053 7.6451627 11.8925615 14.3918222 9.2847045 10.1467173 12.0418750 11.9366318 4.8438231 6.0153035 9.7497798 12.7543278 -0.2577350 11.0754406 5.7422865 6.9775020 4.2866077 10.7233768 11.7878175 10.8321771 12.0288431 13.0810681 8.3897436 11.2574923 10.8895878 11.4456121 11.4220586 5.6411385 12.0000660 10.5269202 4.2658494 10.1331707 9.4076213 2.4097982 6.2234129 10.8444797 10.8394395 10.1904016 10.1027666 2.2447957 9.8525510 13.1764791 12.8630632 10.4409900 9.5230985 0.58274000 0.59206000 0.01265500 -0.00298030 -0.59448000 0.01740400 0.00763920 -0.61556000 0.00138680 0.00138680 0.00138680 0.02062300 0.02062300 -0.00539920 0.00694350 0.00694350 0.01098200 0.00458000 -0.00664320 -0.59973000 -0.60593000 -0.02548300 -0.02548300 -0.02548300 0.01014600 0.01014600 0.01014600 0.03383100 -0.60197000 0.00485790 -0.00498440 0.01265500 -0.63812000 -0.59448000 -0.00013862 -0.00013862 0.00763920 -0.61556000 -0.63339000 0.01307400 0.01307400 0.00138680 -0.00705760 -0.00705760 -0.00705760 0.00000000 0.02062300 0.02062300 -0.00539920 -0.00539920 -0.61767000 0.01992300 0.01098200 0.00458000 -0.60950000 -0.00664320 -0.59973000 -0.59973000 -0.59944000 -0.58853000 -0.02548300 -0.02548300 0.01572700 0.01014600 0.01014600 0.01419000 0.01628600 -0.59468000 -0.59468000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.600 -0.599 0.000 -0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.578 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 0.000 -0.594 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.116 -0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.600 -0.599 0.000 -0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.578 0.000 0.000 0.000 -0.595 0.000 0.000 0.000 0.000 -0.594 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.116 -0.116 7.2632316 NA 4.4971716 10.1263496 11.1671514 6.3307000 10.9109574 9.0392015 7.9752817 2.2447957 11.0131646 10.4796988 3.2866003 3.9386810 2.3272562 8.7553753 4.2866077 10.2713904 11.7913397 10.7898637 9.3710345 1.4792306 7.8508100 9.7628022 6.4656611 3.5148797 0.1573025 -1.8426975 11.3135639 7.6044057 7.0121910 8.2710652 8.9130450 10.1510007 10.7909992 6.6531776 8.3359879 NA 9.3831327 12.6141905 8.6013024 6.2917490 0.4792306 4.3272490 8.1685503 -0.8426975 3.2447805 NA 5.5410284 3.6877662 4.2017201 10.2504102 0.7422650 7.4724723 10.2146377 9.9448173 3.9386810 9.6116220 12.6439065 9.2388062 0.7422650 3.5835913 11.1866101 1.1573025 NA 0.9646574 0.9646574 13.0041941 4.9646759 7.9021568 12.6876682 10.5867976 10.7759377 12.6667886 12.0141374 9.6504978 11.5871218 13.0712874 8.9662871 9.7497798 9.4848754 0.1573025 7.8119590 11.6112364 11.1431648 11.0263382 7.8612265 13.9229182 9.3140380 5.8083748 8.4194175 8.9055158 10.6224402 7.5981917 7.1488446 11.3643371 6.7903185 5.0028150 10.4287858 7.6551743 6.4527700 10.6486749 10.3930379 10.2234121 7.9996731 7.9172109 13.9194712 6.2126044 10.8277888 10.5402170 9.9626637 9.6080186 10.6002663 9.7309700 9.9484857 10.7616444 9.0581896 NA 8.8630331 6.8951790 12.7543278 5.4147106 11.0754406 8.6044061 9.9715048 10.7233768 7.2073346 14.4198214 9.3526950 10.7207574 13.0427332 10.9662870 0.4792306 -0.5557570 10.9356053 10.3526950 9.9345781 TCGA-D8-A1XQ 69 0 NA 499 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 6 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.529376e-05 5.305999e-06 19.9335548172757 8.97009966777409 2.82392026578073 29.734219269103 38.5382059800665 9.9320483 8.6329756 10.5699914 8.9551117 9.0041879 8.5746019 8.9863865 9.9765833 12.4382488 13.1370507 9.6875776 10.7253861 1.0025945 11.7309850 2.0025945 9.3961222 6.4944316 9.3595021 12.5682927 8.3576149 -1.8049044 6.2505069 9.1266998 9.3600427 11.5924972 6.0281138 2.3651606 10.2991670 10.5334028 0.1952216 9.2511839 7.1435904 NA 6.6910791 9.9650615 10.6890791 9.8760227 9.1760771 9.9605097 11.1399357 5.5702625 4.7498131 16.1673901 6.7267999 8.8991273 10.5103732 10.1750061 2.7187890 NA 10.4222378 10.0102065 0.1952216 9.8485165 5.6464334 7.0122077 5.9025825 10.7712355 11.8880570 9.6800465 11.4650808 12.8870762 7.4360152 10.9526136 10.6635626 11.1530512 10.4119695 3.1021206 12.4967913 9.7109235 7.4573185 11.2634981 8.6360928 3.0566876 5.8817233 9.6790395 10.4780225 10.1874539 10.4872576 3.0531982 6.1200367 13.2691978 12.6505508 9.0694366 10.0686677 2.936500 0.081322 0.232560 1.267800 0.029888 0.056940 0.763890 0.228230 -0.300750 -0.300750 1.432600 0.046842 -0.193120 -0.527360 0.434460 0.092460 -0.473000 -0.273200 0.525900 -0.261550 -0.525420 -0.173220 -0.173220 1.004900 -0.105000 -0.105000 0.294210 0.175130 -0.493500 -0.262880 -0.236920 0.153670 0.029888 -0.497780 -0.862470 -0.556870 1.512300 0.228230 -0.851700 -0.523280 -0.169420 -0.290000 0.589010 -0.506600 0.075559 -0.147850 -0.531540 0.314180 -0.245690 0.434460 0.539770 0.046842 -0.473000 0.000000 -0.126940 0.392470 0.418310 0.096816 -0.831060 -0.138200 -0.173220 -0.173220 -0.049019 -0.439620 -0.105000 -0.196370 -0.065447 -0.785220 0.089272 -0.193 -0.193 0.000 0.000 -0.473 -0.473 0.000 0.000 -0.260 0.000 -0.138 -0.173 -0.173 0.000 0.000 -0.426 -0.426 -0.151 -0.046 -0.021 0.175 0.000 0.000 0.000 0.000 0.154 0.154 0.000 0.000 -0.541 -0.541 0.764 0.764 -0.507 -0.507 -0.290 0.506 -0.506 -0.506 0.155 0.155 -0.193 -0.193 0.000 0.000 -0.473 -0.473 0.000 0.000 -0.260 0.000 -0.138 -0.173 -0.173 0.000 0.000 -0.426 -0.426 -0.151 -0.046 -0.021 0.175 0.000 0.000 0.000 0.000 0.154 0.154 0.000 0.000 -0.541 -0.541 0.764 0.764 -0.507 -0.507 -0.290 0.506 -0.506 -0.506 0.155 0.155 7.9863865 6.4431508 8.6340156 10.2074989 11.7923451 5.8811629 10.0021759 8.9229230 8.5520058 NA 13.1770138 11.6648425 3.2826918 NA 3.5527705 9.1588422 4.2826844 11.8612257 12.2926797 12.7678646 9.6520913 4.2826844 7.6567030 10.4573185 7.7246544 4.0778668 1.5171749 NA 10.4470019 3.7187890 5.9567746 9.0074010 7.9584361 10.7546485 9.8076314 4.0025765 9.2545681 6.1782167 7.8300347 13.0397823 7.7707630 6.5439521 NA 0.1952216 8.3437001 0.1952216 3.7187890 1.5171749 6.4666858 3.7209788 3.1952216 11.6200460 4.4046784 5.9434174 11.0360016 10.6830636 5.3245082 9.2760411 13.7547501 9.5052683 5.9765836 4.9634094 10.6157103 1.0025945 7.4921400 1.7801841 6.9060295 12.892822 6.355096 9.002578 11.730985 10.133701 10.374822 8.357615 9.775482 9.384430 9.833660 14.749483 11.050092 10.422238 7.306359 2.443156 9.910757 11.168562 10.400100 12.213337 4.839078 13.930435 8.823669 7.778306 9.531730 7.878218 10.316071 6.849859 4.976584 9.687578 7.183908 3.002577 10.104367 5.433627 8.456708 12.670134 10.142495 11.338926 8.341156 8.036002 7.228647 8.830035 11.718515 9.876023 10.487258 10.331253 10.106616 10.505552 11.039537 9.789548 9.287981 NA 10.044805 6.385048 10.010207 9.354464 9.848517 6.613076 10.302823 10.771235 7.280032 13.509524 10.012607 11.430789 11.790831 10.663593 2.895671 -1.804904 9.926543 10.151963 9.066359 TCGA-D8-A1XR 56 0 NA 482 breast stage iib t2 n1a m0 female 2010 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 2 1 4 3 4 1 5 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 27.2727272727273 9.09090909090909 0 36.3636363636364 27.2727272727273 10.218048 10.314673 11.675827 9.639431 8.845580 8.810662 10.666092 9.881587 9.648897 12.388444 11.703020 10.540218 3.000090 12.391468 3.585059 10.054695 6.119030 7.647548 11.835845 13.572998 2.807437 13.846927 6.243263 10.091826 10.688996 6.175016 -2.000000 8.448206 11.914382 2.585059 5.994444 7.651142 NA 3.672516 10.111226 11.630244 10.614340 11.786360 10.354615 11.832684 5.820268 10.601861 14.496866 9.383373 9.257478 11.735223 11.629105 2.807437 2.322015 8.821067 11.207562 NA 11.165782 3.614804 4.754978 5.219258 10.364498 12.124858 10.784725 12.419853 12.957192 6.603717 10.279411 10.497977 11.157121 10.847735 5.539249 12.924114 11.062811 NA 9.987710 9.370233 3.646543 2.858080 11.156489 10.692924 10.684181 9.847539 1.807437 7.784725 12.225750 11.226201 9.893392 9.158069 1.23180000 1.23240000 0.07656600 0.06494000 -0.73847000 0.04542400 0.03383100 0.03383100 0.04216600 0.04216600 0.04216600 -0.06072800 -0.05590300 0.01642500 0.01642500 0.01642500 0.01153900 0.01153900 0.05793900 0.02118300 0.01754400 -0.04522800 -0.04522800 -0.04522800 -0.07974200 -0.07974200 -0.07974200 0.09449100 -0.34756000 -0.31801000 -0.31120000 0.07656600 -0.73847000 -0.74225000 0.04267800 0.04267800 0.03383100 0.03383100 0.03383100 1.33920000 0.00000000 0.04216600 0.02539000 0.02539000 0.02539000 -0.00960180 -0.05590300 -0.05590300 0.01321300 0.01642500 0.01642500 0.01642500 0.01153900 0.01153900 0.01153900 -0.73099000 -0.01817800 -0.01817800 -0.00092201 -0.75773000 -0.04522800 -0.04522800 0.65351000 -0.07974200 -0.07974200 0.09449100 -0.12330000 -0.16777000 -0.16777000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.113 -0.758 0.000 0.000 -0.765 -0.765 0.000 0.000 -0.318 0.914 0.000 0.000 -0.180 -0.168 -0.311 -0.311 0.000 0.000 -0.738 -0.738 0.000 0.000 0.000 0.000 1.339 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.113 -0.758 0.000 0.000 -0.765 -0.765 0.000 0.000 -0.318 0.914 0.000 0.000 -0.180 -0.168 -0.311 -0.311 0.000 0.000 -0.738 -0.738 0.000 0.000 0.000 0.000 1.339 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7904388 -2.0000000 4.8202709 10.4279268 11.2621850 7.1110950 11.5856396 7.8715024 8.8412693 -2.0000000 10.7303480 10.6379535 6.1396414 1.7005285 3.5236498 8.5746836 3.7814541 10.0941678 11.5225491 11.6441717 9.6037165 1.9069675 8.2889560 9.9680369 5.4430330 6.7583138 1.1699891 NA 10.9103581 5.5925467 7.8361406 8.2889560 3.6148041 10.1361648 10.8545690 4.2480186 8.3510293 -2.0000000 8.1357996 12.0607017 8.7724046 7.3107027 -1.0000000 0.5850587 9.0526583 7.2265027 3.9542894 -1.0000000 2.7549730 5.4441933 2.9069868 10.1367610 -2.0000000 5.6000021 10.7752889 10.0182903 4.5699467 9.5855222 11.2799909 6.0875541 2.3220147 5.2289072 11.7827813 4.1899115 0.3220435 1.4595365 2.0001082 14.150995 4.965877 8.204661 12.391468 10.705943 11.562929 13.572998 13.405365 9.566144 11.176107 13.564329 8.774877 8.821067 9.396695 2.322015 8.335481 11.473669 10.6216842 11.9454426 6.2621851 13.8092762 8.6733992 3.5850587 8.9024653 9.5123367 10.1886512 5.8074451 8.6203100 11.7030204 4.0875562 -2.0000000 11.3871651 6.6865902 6.5764617 10.3446635 10.0286870 11.9609067 8.6837691 8.6212262 12.8648083 2.9069868 11.9463724 10.6143399 10.2741771 9.9337808 11.8115652 10.2607158 10.4851648 10.8494953 9.3724111 NA 9.3516754 9.0898850 11.2075621 2.2480186 11.1657823 6.5469840 10.4119719 10.3644985 7.3129728 13.4147424 10.1017377 10.4646359 13.1686839 9.9976225 -0.4150375 NA 10.4725272 11.2658517 9.9378318 TCGA-D8-A1XS 48 0 NA 496 breast stage iiic t2 n3a m0 male 2010 NA yes other, specify 25 white not hispanic or latino NA NA 1 1 7 2 4 1 5 5 4 1 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 2.774378e-07 29.4117647058824 23.5294117647059 0 23.5294117647059 23.5294117647059 11.1960225 10.3488522 11.4962567 9.7400914 9.3475583 9.0407607 9.2040879 9.8809082 9.3404210 13.2571216 11.5693958 10.5176990 3.2253829 13.6300533 4.2253752 9.1918829 5.1561134 8.9413393 10.6615684 13.2121971 1.2253983 13.1655533 1.5473018 8.7242266 11.7559056 3.8103403 -0.7747251 8.9575449 10.5362741 3.3546637 7.5130896 7.2860735 NA 4.1322643 9.3630090 11.1773906 9.6605267 11.7911935 10.3191251 11.6326452 0.2253983 11.3916974 14.6423233 7.9996376 8.5119353 11.1909813 12.5935428 3.0833666 1.2253983 9.5102014 11.0325310 -0.1896803 11.1286944 5.4445445 6.5741061 5.1678918 10.8771018 12.0270857 10.0692984 13.0221775 12.8245929 7.6133946 11.3425334 10.9731969 11.2317035 10.8535950 4.9935612 12.6606570 11.6764597 -1.7744783 10.1397625 9.5107796 3.0429945 5.8547338 10.0724348 10.2948271 10.4351354 11.4701872 4.0833581 7.9685286 12.2350311 11.7065461 9.6521663 8.9609333 0.9863800 0.9919800 0.0535210 0.0535210 0.0332670 0.1013300 -0.0149160 0.0000000 -0.5041100 0.0019418 2.0957000 -0.0151910 -0.0151910 -0.1633200 2.6796000 0.3177100 0.0239870 0.0239870 -0.0596730 0.0482620 -0.1148200 0.9836900 0.9836900 0.9836900 -0.0053992 -0.0053992 -0.0135050 2.1936000 -0.2993300 -0.2993300 -0.0519910 0.0535210 0.0332670 0.0423070 0.1013300 0.1013300 -0.0149160 0.0000000 0.0000000 -0.0156040 -0.0156040 -0.5150600 -0.1162600 -0.1162600 -0.1162600 -0.1162600 -0.0151910 -0.0151910 -0.1633200 -0.1633200 -0.6653100 -0.6653100 0.0239870 0.0239870 0.0239870 -0.0596730 0.0482620 0.0482620 -0.1148200 -0.6328200 -0.7111400 0.9836900 0.0536640 -0.0053992 -0.0135050 0.7539500 0.0376410 -0.0254830 -0.0431850 0.000 0.000 -0.163 -0.665 0.000 0.000 0.000 0.000 -0.115 0.085 -0.633 0.984 0.984 0.000 0.000 0.000 0.000 -0.299 0.687 1.052 1.052 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 -0.515 1.000 -0.116 -0.116 0.000 0.000 0.000 0.000 -0.163 -0.665 0.000 0.000 0.000 0.000 -0.115 0.085 -0.633 0.984 0.984 0.000 0.000 0.000 0.000 -0.299 0.687 1.052 1.052 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 -0.515 1.000 -0.116 -0.116 0.000 0.000 7.8382459 NA 6.1501900 9.8560996 12.2486119 6.5120277 10.4127295 8.7862069 7.9457926 NA 11.5613259 11.5965714 4.9802630 3.1795747 3.6176981 8.2546644 3.5473018 10.2090836 11.5055682 11.0794666 9.4182865 2.8103403 7.9819337 9.5707826 6.5518067 3.2697663 1.0327356 NA 11.0050967 6.9702118 6.3021929 8.4213647 5.0067379 9.9084905 10.6832712 3.8103403 8.0181679 NA 7.7410773 12.6233193 9.1590680 6.5061481 -1.7744783 8.0214170 8.9162485 3.2253829 1.3952822 -1.7744783 5.4250497 6.5751232 3.2697663 10.3899701 -0.7747251 7.4991730 10.1616473 10.1341452 4.3546637 8.9473310 12.1617393 8.6101611 3.3952959 3.3952959 11.6339725 2.3128394 NA -1.7744783 0.2253983 14.837431 6.286073 9.333248 13.630053 10.070138 11.014096 13.212197 12.608542 9.513667 11.033537 13.455923 11.243578 9.510201 9.066942 -1.774478 8.383987 12.964261 10.7560276 11.6059737 6.8327078 13.0642307 8.8056359 5.4733064 9.1531553 10.4556981 10.1058180 6.7212318 6.9935612 11.5693958 4.6683234 0.5473511 11.1761155 5.6848103 7.7155667 12.1234118 10.0258729 10.8460554 9.9524470 8.2253776 11.8919343 6.3234097 12.6293074 9.6605267 10.1015106 9.6490186 12.1517661 9.0157259 10.6729772 10.4018622 8.5461779 NA 8.5691516 7.2670366 11.0325310 5.9188632 11.1286944 8.4577982 10.1933240 10.8771018 7.2642962 13.5488896 9.9588164 9.8262196 13.2525491 10.0363506 0.2253983 1.8235048 10.4040422 10.6055679 10.0712594 TCGA-D8-A1XT 61 0 NA 506 breast stage iia t1c n1a m0 female 2010 NA no infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 1 4 1 1 2 6 5 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.109751e-06 2.774378e-07 26.8292682926829 19.5121951219512 4.8780487804878 31.7073170731707 17.0731707317073 10.53497981 9.50640042 11.19691547 9.54267690 9.13699162 9.85113389 8.35550483 10.53497981 10.42711439 13.66734662 9.99385010 11.08434841 0.40359495 17.06079939 4.05899179 10.48365528 4.92719958 8.71197630 7.97652689 12.53317789 -1.91811503 11.73253658 8.07039362 9.02014935 10.75302909 7.48258856 2.25162821 11.02000235 10.17413598 1.88904515 7.46108731 7.85319850 -0.91838768 4.86307119 10.27461845 10.41262605 9.77650229 10.08417259 9.79337620 11.61929163 0.08174865 6.24661520 14.99560368 8.25194722 9.66854891 11.25147762 10.98972643 4.84989421 2.25162821 10.24881362 9.99609437 1.08168049 11.72849287 5.54931492 6.49956210 6.25163389 11.09869154 11.56653207 11.90587238 11.89969210 13.07429354 8.67136025 11.47402662 11.14841061 11.61321250 10.87185404 4.63629980 12.82032927 9.08803530 NA 10.79552524 9.12473652 3.17426259 6.46108813 11.10234194 10.26844246 10.78928405 9.91420363 3.16917140 4.58950584 13.62477122 11.23652730 10.41988846 9.18827209 0.04684200 0.27395000 -0.51969000 0.48131000 0.00013863 -0.02849100 0.51228000 -0.52677000 2.25980000 1.79820000 -0.00816240 1.12030000 0.00986690 0.00763920 0.02034300 0.02034300 -0.51280000 -0.00733390 0.00416320 0.01112100 -0.04102400 -0.49350000 3.65690000 0.52731000 -0.46621000 -0.46621000 -0.46568000 0.01768400 -0.48544000 0.04684200 0.02174400 -0.51681000 -0.51506000 0.00013863 -0.51897000 -0.51897000 0.01209700 -0.52677000 -0.53154000 0.04329900 0.01405100 -0.53591000 0.11169000 -0.90662000 -0.00567570 0.02286500 0.00986690 0.01419000 0.02918400 0.02034300 0.01251600 -0.01524800 -0.52213000 0.01474900 0.01474900 0.00000000 -0.51032000 -0.51311000 -0.03204100 0.09173500 -0.49350000 -0.46014000 0.05736800 -0.43897000 -0.45040000 0.00083195 -0.50950000 -0.49840000 -0.51764000 0.000 0.000 0.000 0.000 -0.480 0.000 0.000 -0.510 0.000 0.000 0.000 -0.460 -0.460 0.000 0.000 -0.450 -0.450 0.000 0.201 0.000 0.000 0.000 -0.474 0.000 0.000 -0.517 -0.036 0.000 0.000 0.000 -0.490 0.000 -0.520 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 0.000 0.000 -0.510 0.000 0.000 0.000 -0.460 -0.460 0.000 0.000 -0.450 -0.450 0.000 0.201 0.000 0.000 0.000 -0.474 0.000 0.000 -0.517 -0.036 0.000 0.000 0.000 -0.490 0.000 -0.520 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 8.3201141 -0.3333343 8.5482956 11.0455084 11.7467119 6.3370206 11.0122617 9.3417054 7.3677354 -0.9183877 13.1113846 11.5372021 3.3296403 1.0816805 5.5493149 8.7174273 3.9643524 11.1556833 12.1064160 11.5287924 9.2103479 3.1691714 8.3308228 10.1243946 6.2415809 9.3420407 1.8890451 NA 12.1467887 2.8365907 6.7074185 8.1012997 8.1598602 9.8948450 10.8185338 2.3296403 8.2006505 -1.9181150 8.8457513 11.5230972 8.7390275 7.8181111 -0.3333343 0.4035950 7.8214896 2.6666657 3.3296403 NA 4.4740271 2.6834045 0.8890841 11.2260488 3.1691714 9.7782421 11.3072179 10.1308771 4.7255667 10.6099191 14.0529833 8.8914772 2.9885938 4.6052691 10.0319005 4.4392641 NA NA 1.8890451 12.953274 6.761190 8.875313 17.060799 10.394360 10.828224 12.533178 9.387201 8.917254 10.646097 13.613761 8.659138 10.248814 8.802808 2.251628 8.080300 12.355213 11.6589020 11.6953836 6.8164192 13.2835647 10.5290508 5.1369911 9.5293091 8.7037610 10.4254556 6.6130911 7.3177237 9.9938501 6.7786764 -0.3333343 10.2352612 7.7873417 9.0738119 14.4950892 10.7367927 10.7203713 6.6853361 9.2148514 9.5215400 4.9885983 11.2710272 9.7765023 9.9806884 10.1363136 10.7717072 10.3042022 11.5104619 10.6160121 9.6052712 -1.9181150 10.1521723 7.6356840 9.9960944 4.0124435 11.7284929 8.9818213 10.7910084 11.0986915 7.9396903 13.9467658 9.7946660 10.3917539 12.1023419 10.6410863 2.6052810 -1.9181150 10.8334625 10.2789259 9.8704275 TCGA-D8-A1XU 56 0 NA 395 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 2 2 2 2 1 5 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 3.467973e-07 21.7391304347826 26.0869565217391 4.34782608695652 26.0869565217391 21.7391304347826 9.8068269 10.5389832 11.4098348 10.3017852 7.5348087 9.8035916 10.5389832 9.8876209 9.2112069 14.8262441 10.6063121 10.9514476 2.3671194 12.0235363 3.1040850 9.2612555 5.2846511 8.2056149 9.8836869 12.8996838 3.4825902 13.3018671 4.9653687 8.8642979 11.0181631 9.4474848 0.7821569 11.8084937 11.9524913 4.1744623 7.4042006 7.9964678 -1.8028895 4.8410422 10.5536384 10.6675911 9.9302017 11.0578854 10.5398167 11.2637802 1.7821569 11.4749097 14.5295902 8.4369880 9.2991556 11.0851686 11.1310615 5.3770960 3.6566222 9.3539015 11.1864035 NA 11.0249260 3.7207491 6.4211879 4.3671124 10.2028110 11.6692426 10.5120528 12.2069276 13.2092871 8.2511122 10.5453613 10.0974495 11.5066628 10.7677537 5.6729203 11.6769667 10.2882912 0.1972364 10.3761624 9.4963944 3.1040850 5.5980644 10.5309008 9.7741431 9.3309709 10.0387507 2.5191141 8.8749061 12.4976820 11.6394820 10.2126014 8.9140059 0.37611 0.34128 -0.33987 0.38386 -0.33929 0.39164 -0.35943 -0.34469 -0.35019 -0.35019 0.39065 1.03310 -0.33653 -0.34710 -0.34710 0.29406 0.36575 0.36575 -0.34354 0.37874 -0.34504 -0.34584 -0.34584 -0.34584 0.35675 0.35675 0.36094 1.05060 -0.33537 -0.33929 0.34762 -0.33987 -0.33768 -0.33929 0.39164 0.39164 -0.35943 -0.34469 -0.35053 0.41011 -0.29076 -0.35019 -0.34320 -0.34320 0.38039 0.37051 -0.33653 -0.34010 -0.34710 -0.34710 -0.34515 -0.34653 0.36575 0.36575 0.36575 -0.34159 -0.34228 -0.34228 -0.34125 0.37364 -0.34584 -0.34584 -0.33894 0.35724 0.36094 0.37726 0.38998 -0.34079 -0.34079 0.685 -0.337 -0.345 -0.345 0.366 0.366 -0.342 -0.342 -0.341 0.382 0.382 -0.346 -0.346 -0.344 -0.344 0.361 0.361 -0.339 0.002 0.377 0.377 0.390 -0.341 0.347 0.347 -0.340 0.039 -0.338 -0.338 0.392 0.392 -0.351 -0.351 0.123 -0.287 0.029 0.380 0.027 0.371 0.000 0.000 0.685 -0.337 -0.345 -0.345 0.366 0.366 -0.342 -0.342 -0.341 0.382 0.382 -0.346 -0.346 -0.344 -0.344 0.361 0.361 -0.339 0.002 0.377 0.377 0.390 -0.341 0.347 0.347 -0.340 0.039 -0.338 -0.338 0.392 0.392 -0.351 -0.351 0.123 -0.287 0.029 0.380 0.027 0.371 0.000 0.000 8.0348144 2.1971734 5.0045418 9.7363453 10.7428749 6.4666402 11.1415324 8.7076142 9.3441687 0.1972364 11.6362381 11.1737058 3.1971892 5.3870109 3.1513880 8.1055791 4.5722288 10.8164894 11.2483954 10.8507033 8.7933760 5.2084119 8.1338245 9.5486778 5.7670430 7.4663131 1.1971734 -1.8028895 10.3940959 5.0173652 8.1943658 8.9242561 5.0045418 10.4423261 10.2066652 5.7517743 7.9369671 NA 8.6810022 12.0629197 8.8283634 6.6930408 -1.8028895 7.6255467 7.8118961 1.0045373 3.7821464 NA 3.4825902 4.8303263 3.4451175 10.6769667 2.0045373 8.6150388 10.0809752 10.0652373 4.2415809 10.7847295 12.7806806 8.5325768 1.3670914 3.3264654 11.6073727 2.5191141 NA 2.5191141 -0.8028895 12.640172 5.744080 8.192954 12.023536 10.241581 11.010767 12.899684 12.117446 8.434396 11.151019 12.611740 8.237476 9.353902 8.508935 -1.802889 7.271328 11.142264 11.2302652 12.6233201 7.0828824 13.6733301 8.8634104 5.1279221 8.4686493 7.6255467 10.4860697 7.2084139 7.8482380 10.6063121 8.1426304 6.8553980 10.6985260 3.8976277 7.7542482 11.2958765 10.6007311 10.6388338 8.0411077 8.0551674 12.7940750 5.8836868 11.6226357 9.9302017 11.2580512 8.8256321 11.7049810 9.3689887 10.0536119 10.9335883 9.0053461 NA 9.2547315 9.1528509 11.1864035 5.1513840 11.0249260 8.0269090 11.0121573 10.2028110 7.1130660 13.3220347 10.5356443 10.4736017 12.4995397 9.8022029 0.1972364 NA 10.1876449 10.1290319 10.0629197 TCGA-D8-A1XV 84 0 NA 461 breast stage iia t2 n0 m0 female 2010 NA no mucinous carcinoma 0 white not hispanic or latino NA NA 3 1 2 2 4 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.427581e-07 42.3076923076923 11.5384615384615 7.69230769230769 19.2307692307692 19.2307692307692 10.7570160 10.1220178 11.4702508 9.6054423 8.6337868 8.8965095 10.0903238 10.0340129 8.3560831 13.4355844 11.3665362 10.9189492 1.3651326 11.1339739 4.1724795 9.7419046 7.3696296 8.2030714 9.6121060 13.9945757 3.7980920 13.2051978 6.2623693 9.5657815 10.5082560 8.5784753 NA 7.4525905 12.1522143 0.6281670 7.4944108 7.3099865 NA 3.9011855 9.6365911 10.4923485 10.4871794 10.2845872 10.3718749 11.3949673 14.2096768 12.0474204 13.9003547 8.9577045 9.0984822 11.7808697 11.6083020 2.2131295 5.2131256 8.9605719 9.6523786 -0.9567955 10.9754147 2.6281670 3.5667665 3.2131295 11.0269061 12.2134379 10.0731773 11.1072689 12.8328354 7.6542250 10.8497495 10.9277520 11.0516285 10.9489630 4.9011807 11.8607832 11.4198679 NA 9.7871928 8.8665671 2.8526181 4.6579086 10.6393896 10.6407869 10.3082288 9.6300397 1.0432045 7.6168473 10.9304205 10.5005808 9.8972890 8.5765297 8.0434e-01 8.0434e-01 1.2987e-01 1.2987e-01 -1.0283e-02 9.6763e-03 -9.7314e-03 -9.7314e-03 7.8081e-04 7.8081e-04 7.8081e-04 -2.0702e-01 -2.0702e-01 6.4213e-04 6.4213e-04 6.4213e-04 -9.5935e-03 -9.5935e-03 2.1412e-02 -1.4274e-03 1.6088e-03 3.1398e-03 3.1398e-03 3.1398e-03 -1.8524e-03 -1.8524e-03 -1.8524e-03 5.6406e-03 -2.0938e-01 -2.0938e-01 -2.0353e-01 1.2987e-01 -1.0283e-02 -1.0283e-02 0.0000e+00 0.0000e+00 -9.7314e-03 -9.7314e-03 -9.7314e-03 1.6131e-03 1.6131e-03 7.8081e-04 8.7511e-05 8.7511e-05 8.7511e-05 8.7511e-05 -2.0702e-01 -2.0702e-01 6.4213e-04 6.4213e-04 6.4213e-04 6.4213e-04 -9.5935e-03 -9.5935e-03 -9.5935e-03 -2.2688e-03 -1.4274e-03 -1.4274e-03 3.1398e-03 1.0791e-02 3.1398e-03 3.1398e-03 2.8621e-03 -1.8524e-03 -1.8524e-03 5.6406e-03 -3.2370e-03 -8.6435e-02 -8.6435e-02 -0.207 -0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 0.804 0.000 0.000 0.000 0.000 -0.204 -0.204 0.130 0.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.207 -0.207 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 0.804 0.000 0.000 0.000 0.000 -0.204 -0.204 0.130 0.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5765297 NA 3.2911320 9.4684157 11.0624431 7.5228185 11.2830967 8.0760722 8.0719627 NA 11.0364921 11.4007134 8.0290420 3.5026361 3.6870607 8.2081070 4.7980868 9.7384282 11.6721011 11.6097297 9.5569275 4.6281612 8.5330478 9.3606125 5.1092895 0.6281670 2.2131295 NA 10.8043355 5.6281612 3.6870607 8.3830497 2.2131295 10.0417551 11.1653808 4.5350514 7.1146627 NA 6.6054425 12.9063214 9.2659947 6.3005869 -0.9567955 0.6281670 9.0516285 3.2131295 2.8505594 -0.9567955 2.3651326 6.5195010 2.2131295 10.4778281 -0.9567955 6.4007514 11.0050113 9.9864473 3.2131295 9.0738671 11.4357856 7.4861432 2.5026361 1.0432045 12.4140235 2.0432045 NA NA NA 13.9544069 3.7980920 9.2428723 11.1339739 10.9504662 11.7076472 13.9945757 12.1507439 9.3239705 10.8335484 13.2279203 10.9308013 8.9605719 7.5189332 -0.9567955 7.4652644 11.2842892 10.1821116 12.1151650 8.2330243 13.8165431 8.8392394 2.6281670 8.5842966 9.1776261 9.4419115 5.0655680 8.5189332 11.3665362 6.6725569 NA 11.2246627 8.1385969 6.8190410 8.9073861 9.1980179 11.5442906 8.9959412 8.5108053 12.1295020 3.6281670 11.8014314 10.4871794 10.4122518 9.6073494 11.2508243 8.1385969 10.0766228 10.7462383 9.2453238 -0.9567955 9.3374990 9.6936952 9.6523786 2.3651326 10.9754147 5.8505544 10.7658153 11.0269061 6.9915672 14.0137552 10.3424078 10.6149525 13.1255984 8.8681586 NA NA 10.3617427 10.7677137 10.1359570 TCGA-D8-A1XW 53 0 NA 1309 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 6 1 5 5 2 7 5 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 2.046104e-06 5.895554e-07 8.75 21.25 2.5 28.75 38.75 11.0528703 10.3404247 10.7884865 9.8721754 8.1426034 8.8795692 8.7219215 10.4186388 11.0111945 13.7513436 10.1775153 10.5619558 2.1745023 11.9897894 3.3120116 9.1578865 6.2563068 9.8154808 8.9195710 5.9042480 NA 10.5155497 8.3787578 9.3256884 10.6515965 7.1349006 -0.7324043 10.1570121 9.5332372 1.2675957 9.3754932 7.9628503 -0.7324043 6.0023312 10.0411736 10.0858049 9.5483931 10.6196656 9.8591446 12.1515065 1.5895718 4.5155485 15.9487440 7.7174722 8.5895504 11.2272620 10.9108020 2.8525782 1.0749849 10.0977413 11.4671412 0.5895718 10.9878665 4.5714038 8.0717530 5.2101356 11.6463235 11.0216746 9.2174488 12.1695262 12.7257725 7.0749774 11.4585272 11.3636900 11.1833149 11.0761843 5.6938883 12.1858333 10.4456645 1.5895718 10.4940344 9.0031783 5.2736949 6.9258333 10.5530244 11.1005123 9.6812502 10.2488327 2.4375474 10.1028831 12.7417718 12.4867908 9.5541800 9.5616685 1.034000 0.904520 -0.029721 0.580950 0.099433 0.785240 -0.070536 -0.028355 0.075847 0.075847 1.691500 1.271400 -0.069600 -0.638500 0.555490 0.555490 -0.033677 -0.033677 1.256200 -0.044280 -0.578320 -0.081085 -0.081085 -0.080408 -0.069332 0.368210 0.368210 0.435130 -0.092571 1.034000 0.000000 -0.029721 -0.631590 0.054660 -0.174240 -0.174240 -0.070536 -0.028355 -0.028355 -0.111550 0.605210 0.075847 0.717350 0.655350 -0.027261 -0.053881 -0.069600 -0.099487 -0.638500 0.013074 1.110800 0.508460 -0.033677 -0.033677 -0.033677 -0.027535 -0.635950 -0.635950 -0.068127 0.379070 -0.081085 -0.081085 -0.064106 -0.069332 0.368210 0.463140 0.670850 0.425360 1.329300 0.554 0.000 -0.638 0.495 0.000 0.000 0.000 0.000 0.000 0.968 0.968 0.000 0.000 0.629 0.000 0.000 0.368 1.034 1.034 0.435 0.435 0.671 1.329 0.000 0.000 0.000 0.000 -0.632 0.000 0.611 -0.174 0.000 0.000 0.000 0.000 1.146 1.146 0.586 0.000 0.195 0.195 0.554 0.000 -0.638 0.495 0.000 0.000 0.000 0.000 0.000 0.968 0.968 0.000 0.000 0.629 0.000 0.000 0.368 1.034 1.034 0.435 0.435 0.671 1.329 0.000 0.000 0.000 0.000 -0.632 0.000 0.611 -0.174 0.000 0.000 0.000 0.000 1.146 1.146 0.586 0.000 0.195 0.195 7.9541230 -0.7324043 5.1379871 10.2163545 9.9997896 5.5265165 10.6144130 10.0816680 8.1237055 NA 12.8089004 11.5615881 3.8525882 NA 4.2449023 8.6085849 5.7754167 10.6534846 11.2625060 11.0717533 8.9382784 NA 8.4046132 10.4846712 7.5872945 5.1983606 6.9680619 1.5895718 11.2520407 -0.1473619 6.7950994 8.5390851 4.8067829 9.6276134 10.5323581 7.6599395 8.1894633 1.5895718 8.9177763 13.0479570 7.6448326 8.1954003 2.5155611 2.2676257 8.1441392 2.8525782 0.2675957 NA 5.3969061 2.9713872 8.4262320 10.3927128 6.2899893 10.9015257 10.5355793 10.0187478 4.8823300 8.9878665 12.9040203 9.9262800 3.0749849 4.7594755 10.7726894 3.1256015 7.7634773 NA 5.3761480 11.136636 5.668502 8.617456 11.989789 10.641847 10.823889 5.904248 9.866140 9.422599 11.117418 13.092979 10.440050 10.097741 8.208670 NA 7.971526 11.817166 10.2239984 10.6804567 6.2042601 15.4791770 9.4154631 6.6251740 7.5872945 8.3364003 9.5368483 7.9204672 5.4964400 10.1775153 6.0424101 1.4375474 10.4262319 5.4574465 7.2771711 13.1947057 10.2721939 9.9882940 7.8563371 7.3709097 10.9094482 8.3037958 10.7282087 9.5483931 10.6344908 8.9895759 11.8164442 10.9797193 12.1061368 10.4767710 10.1654677 NA 10.4137040 7.6911161 11.4671412 6.8067816 10.9878665 6.5107958 10.5599554 11.6463235 7.7931429 14.3241753 10.1942889 11.6403513 12.1681117 9.2167194 -0.7324043 2.7270491 11.9429178 10.1060384 9.8511751 TCGA-D8-A1XY 74 0 NA 503 breast stage iia t2 n0 mx female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 1 6 2 2 2 5 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 4.161568e-07 30.5555555555556 30.5555555555556 8.33333333333333 16.6666666666667 13.8888888888889 10.96387592 10.24454544 11.06124582 9.57439031 9.51307123 8.22116996 9.12112085 9.73126302 10.08645990 13.31421407 10.18435754 10.56434978 1.72451931 13.08107812 3.35677767 9.68219860 6.73797873 8.29740559 7.64576217 12.91087800 2.92615127 13.11484631 2.10302758 9.19537836 10.84786157 7.53701412 -0.01246084 8.90641383 10.21917167 1.40261304 6.69260713 8.15914426 NA 4.33332354 10.17077234 11.14973201 9.89894249 11.53203204 10.08338705 11.66791004 -1.59727782 11.07457126 14.82994997 8.20110844 10.02234950 11.34839759 11.73112268 4.37987045 NA 9.63500902 11.76904683 -1.59727782 11.28504000 5.04644304 5.82043939 5.11683465 9.64278315 11.55439737 10.40715961 11.57610903 13.01292082 8.06792369 10.86304392 10.54381706 11.54437584 10.47539055 5.01729839 12.06024140 10.17902106 0.98753916 10.43910510 9.63500902 2.40348588 5.65051471 9.97291806 9.24807818 10.68219860 10.52120467 3.10302758 9.00528685 12.51486460 11.61204138 9.36837223 9.05004643 0.439570 0.596380 -0.111550 0.522930 -0.096384 0.197560 0.171060 0.191320 0.477010 0.477010 0.492510 0.065799 0.065799 0.173470 0.173470 0.173470 -0.464990 0.251990 -0.793520 -0.105130 -0.126420 0.632620 0.632620 0.632620 -0.152600 -0.144640 -0.145800 0.472210 -0.457910 -0.435610 -0.116390 -0.111550 -0.103520 -0.091684 0.203960 0.203960 0.171060 -0.454690 0.174230 0.226690 0.199440 0.477010 -0.118610 -0.118610 -0.118610 -0.134320 0.065799 0.065799 0.173470 0.173470 0.173470 0.173470 -0.437780 0.198780 0.169560 -0.731170 -0.113840 -0.122340 -0.122800 -0.464430 -0.466740 0.632620 -0.104210 -0.152600 -0.145800 0.472210 -0.110770 0.051672 0.051672 0.000 0.000 0.173 0.173 0.176 0.176 -0.149 -0.114 -0.122 0.293 -0.445 -0.467 0.166 -0.104 -0.104 -0.146 -0.146 0.161 0.596 0.472 0.472 -0.111 0.000 -0.106 -0.106 -0.748 -0.748 0.000 0.000 0.204 0.204 0.171 0.171 0.192 0.192 0.477 0.477 -0.119 -0.119 0.000 0.000 0.000 0.000 0.173 0.173 0.176 0.176 -0.149 -0.114 -0.122 0.293 -0.445 -0.467 0.166 -0.104 -0.104 -0.146 -0.146 0.161 0.596 0.472 0.472 -0.111 0.000 -0.106 -0.106 -0.748 -0.748 0.000 0.000 0.204 0.204 0.171 0.171 0.192 0.192 0.477 0.477 -0.119 -0.119 0.000 0.000 7.8288531 NA 4.3798704 10.3705347 11.4979850 7.1725245 10.7887200 8.9231477 8.2848185 2.5725017 12.5065314 11.8471578 2.4025858 3.9261513 4.1030276 8.1202643 3.4469840 10.3531440 11.5078418 11.1507809 9.3912726 0.7244757 7.9610086 9.9212411 5.2099446 6.6693741 3.7601358 NA 11.3432687 5.5215282 6.7335048 8.0732445 4.3333235 9.9213002 10.1482624 3.1030276 7.6022601 -1.5972778 7.0785447 11.3795101 8.5150276 6.7513164 -1.5972778 -1.5972778 8.7075096 6.8864038 3.2099368 NA 2.8620149 4.1665307 2.1030276 9.5202311 1.7245193 8.5241217 10.4524366 9.6439754 5.7154706 9.6740510 13.3781673 8.0191370 0.4026130 3.0464387 12.3165059 1.8620347 NA NA 1.5725017 12.702998 4.017298 9.154969 13.081078 9.301990 11.017528 12.910878 11.258819 9.509805 10.539899 13.053191 9.775997 9.635009 9.204296 NA 7.847603 11.394110 11.049147 11.533963 7.359690 12.571415 8.718869 4.531868 9.095203 8.801332 9.964830 6.157476 4.130511 10.184358 6.495345 9.642187 10.950206 3.926151 6.296496 11.218572 10.372694 11.331106 8.794905 8.649329 12.571730 4.017298 12.320327 9.898942 10.410316 9.842419 11.739792 9.973867 10.427035 10.364399 9.652294 NA 8.823622 8.721899 11.769047 3.862015 11.285040 9.059013 9.777394 9.642783 7.031944 12.458887 9.608381 10.503579 13.484654 9.867644 0.402613 4.446984 10.103028 10.672883 9.256677 TCGA-D8-A1XZ 81 0 NA 466 breast stage iiia t1c n2a mx female 2010 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 4 2 1 2 1 2 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.456549e-06 3.81477e-07 37.7358490566038 26.4150943396226 1.88679245283019 28.3018867924528 5.66037735849057 10.0103867 9.4042905 10.4364599 8.9376033 8.2907022 9.1180300 10.0131292 10.4784553 10.1482823 14.2011618 11.1011904 11.2318825 0.7502635 11.5866962 2.1653010 8.8315128 4.1425686 8.9033812 9.4696402 12.7015360 0.9726191 13.6786771 0.4871776 8.9160628 11.3620446 6.4036938 -0.8346990 9.0699234 11.5721581 2.6888517 7.8447692 6.8127472 -0.8346990 4.7044460 10.3771771 10.1292686 9.4662133 10.0302487 10.4990032 9.7790783 5.3048396 10.7457829 15.2330487 8.5311299 10.5101395 11.0486958 10.6012194 3.7198734 NA 8.9334732 9.6071955 NA 10.6280467 7.7294386 6.7946459 4.7652006 10.3600456 12.0943622 11.0910286 10.4291448 12.9137437 7.1709135 10.9107530 10.7159899 10.7289618 10.2147970 4.7044460 11.4603402 11.3008377 -0.8346990 10.6415287 10.2550702 2.7502420 6.0418059 8.7577457 10.1511307 9.7398824 10.6056389 5.3551150 6.3501648 11.8856399 10.7925947 9.8880963 8.8482834 -0.404400 -0.414540 -0.195050 -0.194750 0.266710 0.185860 0.305530 0.271740 0.320440 -0.627220 3.656900 0.120200 -0.340790 -0.112210 -0.112210 -0.112210 0.195580 0.211310 -0.344690 0.606110 -0.517020 2.982300 -0.487330 -0.510010 0.395950 -0.636320 0.295490 0.625330 -0.858050 -0.045635 0.086956 -0.195050 0.266710 0.265140 -0.631310 0.186160 0.305530 0.271740 0.271740 0.263260 1.438500 -0.649420 -0.022469 -0.022469 -0.022469 -0.022469 -0.340790 -0.360340 -0.329130 -0.112210 -0.042788 -0.042788 0.195580 0.211310 0.219910 0.105550 -0.605350 -0.226620 -0.390960 0.475290 -0.518620 -0.487330 -0.029311 -0.570410 -0.154000 -0.159500 -0.185590 3.656900 0.338850 0.120 0.120 -0.112 -0.112 0.196 0.196 0.000 0.661 -0.391 0.475 0.475 -0.487 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.625 0.625 -0.186 0.339 0.000 0.000 -0.195 -0.195 0.267 0.267 -0.445 -0.631 0.272 0.272 0.622 0.622 0.879 1.517 0.000 0.000 0.196 0.196 0.120 0.120 -0.112 -0.112 0.196 0.196 0.000 0.661 -0.391 0.475 0.475 -0.487 -0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.625 0.625 -0.186 0.339 0.000 0.000 -0.195 -0.195 0.267 0.267 -0.445 -0.631 0.272 0.272 0.622 0.622 0.879 1.517 0.000 0.000 0.196 0.196 8.4024988 5.9661882 5.0356547 9.3333341 10.5939107 6.8444522 10.7507208 8.9423057 7.6102003 1.3351974 11.9184010 11.2820957 2.8657209 1.3351974 2.8657209 8.4917184 4.3941094 11.0477408 10.9295384 10.3367783 9.7039627 NA 8.6541330 9.8310689 6.4781710 2.8657209 -0.2498223 NA 10.2839055 7.9580788 6.5915538 8.9033812 5.2313786 10.4960572 9.2900564 4.1652849 8.9958039 -0.8346990 6.9790696 12.5962640 8.3588143 6.7689148 NA -0.8346990 8.7341951 -1.8349564 3.7198734 NA 5.9790696 4.5576061 3.6888517 11.2624979 -0.2498223 5.1765143 10.7923666 10.5280546 3.9466467 9.8337306 12.9644692 8.1890432 3.8657308 4.0960257 10.8416867 1.8657209 -0.8346990 0.4871776 2.5576061 12.741003 3.920179 9.565634 11.586696 10.235074 10.256724 12.701536 9.989850 9.318207 10.806437 12.317336 12.549128 8.933473 7.925177 4.906756 7.520640 10.543042 10.6144375 11.7753909 8.6134049 13.0777090 8.9134816 5.9466490 9.5294235 8.3904962 10.2167051 7.2394305 4.9334735 11.1011904 5.8019140 0.4871776 10.1925037 5.4506900 9.0021123 10.7907694 9.8172374 10.4235603 8.3661876 8.0706759 8.8700570 7.8966079 11.6004472 9.4662133 10.2192146 9.3814283 12.4901022 8.5618935 10.8940596 10.1407785 8.8691922 7.8674616 8.8550335 7.9810563 9.6071955 7.9918370 10.6280467 7.9016905 10.5269585 10.3600456 6.9629504 13.9261906 9.6257446 10.2751194 11.9580791 9.5310644 0.4871776 0.7502635 10.3735232 9.9682090 9.4690695 TCGA-D8-A1Y0 65 0 NA 472 breast stage iiia t1c n2a mx female 2010 NA yes infiltrating ductal carcinoma 9 white not hispanic or latino NA NA 1 1 4 3 1 4 5 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456549e-06 5.201959e-07 11.864406779661 23.728813559322 0 33.8983050847458 30.5084745762712 10.716494968 10.622004400 12.056259788 10.479540603 8.417465635 9.303182088 9.226487818 9.842421376 8.619238019 13.189083830 11.669800335 10.606257327 1.331074580 12.127346994 4.179057151 9.455702231 5.578990021 9.037041991 10.480557069 12.618025954 2.594094650 13.060939585 5.674471951 8.999140608 11.303900188 7.257063436 NA 10.656369443 9.817295640 1.009132150 8.739606126 7.524835513 NA 5.075224550 9.887953203 11.107661522 9.836875486 12.035140514 9.777320256 12.053956859 0.009203827 9.974920162 14.129130697 8.964531482 10.308338120 11.338511773 11.594685279 5.020364406 5.803552536 9.544897221 12.314413900 -1.990796173 11.471893736 5.822916208 7.067127772 4.777319762 10.120597664 12.348568387 10.911322548 12.030983398 13.120638371 8.265344530 11.322585836 11.036898488 11.857758822 12.006844640 5.148686044 11.994533126 11.845482171 -0.990796173 9.933577212 9.494965157 3.532067552 6.582783288 10.325983014 9.788444774 10.232232513 10.940981414 3.623843456 8.486894136 13.093404474 11.804668260 9.929860959 9.336688419 0.00166420 0.48045000 -0.02055700 0.24156000 0.47512000 0.45292000 -0.00761010 -0.55591000 0.01796300 0.01796300 1.01110000 0.02048300 -0.53470000 0.92270000 0.55974000 0.47942000 0.48854000 0.48854000 -0.54663000 -0.00401620 0.01460900 -0.50360000 0.02244400 0.02244400 0.04075100 0.02011100 0.03905400 1.09230000 0.00166420 0.00166420 0.02388100 0.02188400 0.02132300 -0.01945200 0.46127000 0.46331000 -0.54320000 -0.55591000 -0.54814000 -0.00332430 -0.00871460 -0.50629000 -0.01320300 -0.01320300 -0.01320300 0.02571300 0.00000000 0.00000000 -0.00097017 -0.51661000 -0.54603000 -0.54603000 0.48854000 0.02244400 0.02244400 -0.54663000 -0.53175000 -0.52450000 0.00541390 -0.52379000 -0.50360000 0.02244400 0.06594200 0.04075100 0.03905400 -0.52133000 -0.00373950 -0.49788000 -0.51974000 0.000 0.000 0.481 -0.065 0.466 0.000 -0.547 0.000 0.000 0.000 -0.524 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.466 0.488 0.954 0.000 -0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.453 0.453 0.000 -0.541 0.000 0.000 -0.506 1.050 0.000 0.000 0.000 0.000 0.000 0.000 0.481 -0.065 0.466 0.000 -0.547 0.000 0.000 0.000 -0.524 -0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.466 0.488 0.954 0.000 -0.508 0.000 0.000 0.000 0.000 0.000 0.000 0.453 0.453 0.000 -0.541 0.000 0.000 -0.506 1.050 0.000 0.000 0.000 0.000 6.9835500 -0.9907962 6.5366125 10.3971532 10.9476128 6.4966940 10.1137346 10.1257398 7.9637683 4.6529912 11.3728600 11.7494848 4.4848664 2.0965992 3.8420234 8.1267788 4.3841742 10.9326490 10.8561932 10.4062757 9.1416356 3.9864200 8.2534996 9.5737617 7.8116521 4.4848664 -1.9907962 -0.9907962 11.7521820 8.3060521 7.8132669 8.3197489 7.6850929 10.7210996 10.2606183 5.8733211 8.5656421 0.3310172 8.1280768 12.1144715 9.2397568 6.8764150 -0.9907962 1.4685833 8.8027393 1.9160180 3.6815617 -0.4058337 7.1614211 4.8296974 4.5941006 10.8723542 -1.9907962 9.2688790 10.4319890 9.9160265 5.8293143 10.2146237 13.2585457 9.8380657 5.0315055 4.1989577 12.2657132 -0.9907962 -0.4058337 -0.4058337 1.4685833 14.391675 6.709576 9.023156 12.127347 9.877187 10.843804 12.618026 12.170740 9.502491 11.600775 12.977353 10.246943 9.544897 8.731090 2.468557 7.151243 11.499987 11.1369690 11.2417067 8.2875854 13.4988261 9.0189646 7.6457607 8.8356844 9.5390545 9.5988386 7.6109067 7.6238457 11.6698003 5.8100369 -0.9907962 10.9435639 6.9487153 7.7689075 10.9391339 10.6740275 10.0946083 6.9309774 8.3512105 14.0689662 7.8035519 13.2124682 9.8368755 10.0276838 8.6357577 11.3127740 9.6877361 11.1787478 10.6475718 8.8569764 NA 8.6335017 8.8798243 12.3144139 7.0832772 11.4718937 6.0859515 10.4364487 10.1205977 8.1150442 14.0543836 10.2594343 9.8837331 12.8437057 10.2029692 3.6529912 1.1790651 11.0198388 10.0542129 10.1313168 TCGA-D8-A1Y1 80 1 302 NA breast stage iiia t3 n1a mx female 2010 NA no infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 2 2 2 2 1 1 5 6 4 1 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.745411e-06 1.595268e-06 53.2467532467532 14.2857142857143 1.94805194805195 17.5324675324675 12.987012987013 9.98906065 9.72040810 11.33845801 8.49938431 8.34809031 8.77460226 9.00338579 10.01273347 9.60203758 8.78947105 11.49445521 10.69995385 3.34217070 12.53854600 1.55365540 10.18666966 8.22352584 8.74619148 9.04989265 12.61627259 3.34217070 13.52707832 4.00113568 9.53950606 10.99812469 4.50363496 0.09423607 9.07152270 10.57679874 -0.32084648 8.88377659 6.73448744 -1.90562879 3.00113568 9.41335036 10.20765948 8.47794724 10.43270067 8.64883175 10.98222498 NA 8.60401793 14.43245692 7.12427540 9.45454133 11.20309395 10.61166621 4.73809767 5.93344753 8.55878842 10.83339052 0.41619119 11.10162060 7.66219909 5.84913108 5.33264707 10.02830227 12.07554253 10.50813516 11.57111561 12.29736139 8.05134491 11.27679237 10.76091069 10.53095434 10.70780214 4.51782369 11.21707085 11.21593821 -0.90562879 10.49618899 9.95338937 1.68997003 6.43853905 10.93049046 9.89149908 9.66314908 9.95494190 3.41617768 9.34572524 12.28105351 11.13778284 10.10267151 9.03822271 0.79917000 0.79917000 -0.42529000 -0.41575000 0.01265500 0.00986690 -0.41542000 -0.40727000 1.13010000 1.13010000 1.19470000 0.00138680 0.02090300 -0.00596690 0.00430210 0.00430210 0.01447000 0.01447000 -0.42517000 0.01223700 -0.42721000 -0.03040400 -0.03040400 -0.03894200 0.00110930 0.00110930 0.00110930 0.37792000 -0.41058000 -0.41058000 -0.39397000 -0.40440000 0.01265500 0.00236540 0.00986690 0.00986690 -0.41542000 -0.40727000 -0.41553000 0.40802000 0.39463000 1.13010000 0.00000000 0.00000000 0.00000000 0.00000000 0.00146720 -0.01116100 0.00736090 0.00430210 -0.00678130 -0.00678130 0.01447000 0.01447000 0.01447000 -0.42517000 0.01223700 0.01223700 -0.42721000 -0.44123000 -0.45815000 -0.03040400 0.00083195 0.00110930 0.00110930 0.37792000 -0.42265000 -0.43453000 -0.43453000 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 -0.427 0.763 -0.441 -0.393 0.000 0.000 0.000 0.000 0.000 -0.411 0.799 0.378 0.378 -0.423 -0.435 -0.404 -0.404 -0.416 -0.416 0.000 0.000 0.000 0.000 -0.407 -0.407 0.395 0.395 1.130 1.130 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.425 0.000 -0.427 0.763 -0.441 -0.393 0.000 0.000 0.000 0.000 0.000 -0.411 0.799 0.378 0.378 -0.423 -0.435 -0.404 -0.404 -0.416 -0.416 0.000 0.000 0.000 0.000 -0.407 -0.407 0.395 0.395 1.130 1.130 0.000 0.000 0.000 0.000 8.24906082 NA 4.46928039 9.94482039 11.45837749 7.32757510 10.82704627 8.55205462 8.27207359 -0.90562879 12.24953544 11.80649899 2.84913859 3.67920983 3.37964868 8.40485545 4.61780390 10.58007216 11.39101567 10.84432170 9.55929907 -0.90562879 8.11522264 10.23762609 5.84243583 1.41619119 4.52051025 -1.90562879 11.04680213 7.06290961 7.53511204 8.03529069 6.35163010 9.53147484 10.50044785 3.18170686 8.65553072 NA 7.34927150 12.47301183 7.86738192 6.75957931 -0.90562879 -1.90562879 8.50469427 -1.90562879 2.90159099 NA 3.48655993 4.13951042 0.09423607 10.94618701 0.41619119 4.52051025 10.20342056 10.15392526 3.67920983 9.34513332 11.48709689 9.02719581 2.18170686 4.36103139 10.84871283 3.97688599 -0.90562879 NA 2.09423607 13.580088 6.416171 8.864907 12.538546 9.953393 11.354133 12.616273 11.244783 9.366873 10.418345 12.945162 11.034373 8.558788 9.558789 1.679199 7.358685 10.562358 10.95746122 11.88601622 6.61780537 13.32767416 8.79901119 4.41617092 9.66077267 9.24525938 10.19503983 6.79814645 8.47794724 11.49445521 6.20276640 -0.90562879 9.98374680 8.71537896 7.80737167 11.41377383 10.63775803 10.76157616 8.66409844 8.87724118 10.28684385 3.58609217 11.31183254 8.47794724 10.80526448 10.06614558 10.89068813 9.50469427 10.07223821 10.64186037 8.91840591 NA 9.14655264 7.64306465 10.83339052 3.09423607 11.10162060 8.72905375 10.79207918 10.02830227 6.53718578 13.81568921 10.19916915 10.32366257 12.09133409 10.49191752 0.09423607 1.79468618 9.62708569 10.12387515 9.67167162 TCGA-D8-A1Y2 71 0 NA 433 breast stage iia t2 n0 mx female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 3 6 3 7 4 3 8 NA NA 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.387189e-07 20 40 15 10 15 10.6207697 9.8422958 10.7186070 8.5242616 9.3762856 9.1984396 8.9108271 10.1391567 9.9290551 12.7293995 10.5096050 10.6687596 0.4040311 13.0251599 1.7259592 11.3039471 6.5537706 8.5333068 9.3109145 12.0303032 1.2113861 12.9483846 4.8302908 9.6686952 10.5200428 5.3109145 -1.5959689 10.3406617 10.8250367 1.5739561 8.3124165 7.5410153 NA 5.1984391 9.1182694 9.9776710 9.2024956 11.5265283 9.2137920 10.2797732 2.1044709 10.7796063 14.5782473 7.1051574 9.0905243 10.4305473 10.6137817 4.5125493 4.4914876 8.8878396 10.6095116 NA 10.8567799 7.4429427 8.1555676 7.1319444 10.0420071 11.6959139 11.0011452 11.3989076 12.5523415 7.7855669 11.3658352 10.8451524 10.5210175 10.6027758 3.5333017 11.8442441 9.4360696 -1.5959689 10.5748877 9.7708925 3.1605169 7.2958075 10.2483372 9.5676734 10.4121022 10.0030068 6.1044625 9.8391731 12.9409388 11.9434250 9.5059995 9.3347611 -0.0107840 -0.0107840 0.3669000 0.3669000 -0.0258230 0.3705400 -0.0118870 -0.0118870 1.0829000 1.0829000 1.0829000 -0.0020784 -0.0020784 0.0141900 0.8202000 -0.2863200 -0.0010062 -0.0010062 -0.4160800 0.0016218 0.0052749 0.4233500 0.4233500 0.4233500 0.8213800 -0.0343170 0.0523830 0.0427320 0.0026357 -0.0107840 -0.0056586 0.3669000 -0.3662000 -0.0258230 0.3719900 0.3719900 -0.0118870 -0.0118870 -0.0118870 0.0076392 0.0062979 -0.4146500 -0.0066432 -0.0066432 -0.0066432 -0.0066432 -0.0020784 -0.0020784 0.0141900 0.0141900 -0.3917800 -0.1246000 -0.0010062 0.0111210 0.0111210 -0.3960800 0.0016218 0.0016218 0.0143300 0.1484600 -0.3767300 0.4233500 0.3938000 -0.3464100 0.0523830 0.0427320 0.0000000 -0.3721100 -0.3721100 0.000 0.000 0.000 0.000 0.000 0.000 -0.389 0.000 0.000 0.148 0.148 -0.377 0.423 0.394 0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.372 0.000 0.000 0.367 0.367 0.000 0.000 0.372 0.372 0.000 0.000 0.000 0.000 -0.406 0.677 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.389 0.000 0.000 0.148 0.148 -0.377 0.423 0.394 0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.372 0.000 0.000 0.367 0.367 0.000 0.000 0.372 0.372 0.000 0.000 0.000 0.000 -0.406 0.677 0.000 0.000 0.000 0.000 8.83865212 NA 5.91181859 10.05462684 11.41420220 6.57279571 10.47883422 8.97170420 8.53491602 3.49148115 12.51450710 12.25330377 4.07644793 0.98899364 3.15891864 7.31391697 5.44841865 11.49098927 11.40719032 9.94753905 9.41874169 7.10099131 8.16224680 10.36185135 7.90187574 5.38130414 -0.59596886 NA 10.91305649 4.44841865 7.44568284 8.87772953 4.51254928 10.16930985 9.54676909 4.31091447 8.78772792 -1.59596886 8.25264651 12.35056460 8.25733315 7.39837688 1.40403114 5.31091447 7.96626606 0.72595923 4.61347861 -1.59596886 7.11483029 3.16158138 3.15891864 10.81076031 NA 6.38701782 10.37987175 10.08526225 5.99648140 10.10662941 12.96602766 10.56924490 4.68942777 5.28666680 10.89937921 -0.01100636 NA NA 1.72595923 12.800964 6.018734 8.725952 13.025160 9.966743 10.652841 12.030303 10.651655 9.495459 10.575201 12.876588 11.501068 8.887840 9.206540 2.491494 7.573949 10.521342 10.9011272 11.6636200 6.2113783 13.7706861 8.9509183 7.3983769 8.1870219 8.7626750 9.9255065 8.2881943 5.9038698 10.5096050 6.4208327 NA 10.0870184 5.5229659 8.3137968 10.9068556 10.6210727 10.6960578 9.2153986 9.4728021 8.8685695 7.5638949 11.2946852 9.2024956 10.7180405 9.7648709 10.5278219 9.6122581 10.6256110 10.3135419 7.8155351 1.4040311 9.1834969 7.2988416 10.6095116 8.0693595 10.8567799 8.5752008 10.7351703 10.0420071 6.7438744 14.3249349 10.9202162 10.4781652 12.9613080 9.9581329 0.4040311 -2.8478815 9.5975492 9.6268187 9.6614117 TCGA-D8-A1Y3 61 0 NA 430 breast stage iiia t2 n2a mx female 2011 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino NA NA 1 2 1 2 1 2 1 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.24847e-06 4.161568e-07 35.4166666666667 8.33333333333333 2.08333333333333 20.8333333333333 33.3333333333333 8.70895109 7.66026693 11.03022633 5.87524436 9.31836678 7.83393812 8.91540199 9.05204821 11.06230429 12.97231425 10.35637163 10.42155858 1.33611197 12.58668067 -0.07902077 8.51101175 6.54553908 8.27419549 2.97993387 11.87815072 NA 14.45011313 0.92105542 9.01874710 11.47547764 4.16897892 1.33611197 9.92245685 10.53514500 -0.66383089 8.68702533 4.74547937 NA 0.65800578 8.78832747 8.52343807 8.69693311 9.55283199 7.59582960 9.79500533 -1.66383089 8.07923729 13.82156959 4.82826091 9.81384435 9.58282675 9.14182998 2.58402444 1.50599252 7.20645080 9.90736480 NA 11.01094044 5.58401241 5.16897491 6.48583253 8.58756864 11.72665818 10.38150456 9.61859547 11.71627661 6.87911759 10.30547264 9.25345822 9.59111482 10.08637444 2.72839946 10.89139427 11.71451651 -1.66383089 10.49438031 10.85940309 1.43871868 5.06400762 8.27860046 8.45632402 10.33150000 10.62552877 9.82593410 9.62437547 12.06475075 10.69611017 9.72194849 9.10922525 0.4701100 0.4384700 0.4978300 0.0176520 0.0138800 0.0580490 0.5351600 -0.4763900 3.6569000 0.4929900 3.6569000 -0.0010013 0.0281100 0.4829300 0.4829300 0.4829300 0.0906880 0.0906880 -0.9882300 -0.2983600 0.0487980 -0.9743900 0.0393050 0.0393050 0.0330950 -0.4729200 -0.4571700 0.0427000 -0.2782500 -0.3314700 -0.4512800 -0.4619800 -0.4778800 0.0301380 -0.4864100 -0.4737600 0.5351600 -0.4754600 -0.4908100 -0.4686800 0.4959300 -1.0184000 -0.4846200 -0.4581300 -0.4750800 -0.9587800 0.0000000 0.0000000 0.4829300 0.4829300 0.4829300 0.4912600 0.0906880 0.0906880 0.0906880 -0.9882300 -0.2983600 -0.2949900 0.0459590 -0.4499900 -0.9743900 0.0393050 -0.4753500 -0.4124800 -0.4571700 -0.4597400 -0.4599500 -0.4455800 -0.4455800 0.000 0.000 0.483 0.483 0.000 0.000 -0.988 -0.298 0.000 0.000 -0.450 -0.966 0.000 -0.454 -0.454 -0.457 -0.457 -0.278 0.160 -0.460 0.000 0.000 -0.446 -0.451 -0.451 0.000 0.000 -0.478 0.000 -0.481 -0.481 0.513 0.056 0.000 0.000 2.639 3.657 -0.455 -0.455 0.403 -0.365 0.000 0.000 0.483 0.483 0.000 0.000 -0.988 -0.298 0.000 0.000 -0.450 -0.966 0.000 -0.454 -0.454 -0.457 -0.457 -0.278 0.160 -0.460 0.000 0.000 -0.446 -0.451 -0.451 0.000 0.000 -0.478 0.000 -0.481 -0.481 0.513 0.056 0.000 0.000 2.639 3.657 -0.455 -0.455 0.403 -0.365 8.8935500 5.8674666 4.8906753 10.5336101 12.0501170 6.6205175 10.4185679 6.6152794 7.3299586 3.5840124 12.7234304 12.1401940 1.5059925 NA 0.6580058 7.3722600 3.7955176 10.1402172 11.3952616 10.2286290 10.3040329 8.4524303 8.6759362 10.0813403 6.3247710 7.4627910 1.3361120 NA 9.9271409 4.2668240 4.0365297 9.4195654 4.0365297 9.0304440 9.7401633 2.5840244 9.4485256 -1.6638309 4.4235513 12.6518726 7.2278700 6.5357590 -0.6638309 1.5059925 8.7528837 4.6759345 2.6580058 NA 4.8596466 -1.6638309 2.9210554 11.7682365 NA 4.8279409 11.4858333 10.8579319 3.6580172 9.0984682 12.6816993 8.9754270 6.3584543 3.2902769 10.3487107 NA NA NA 6.4341178 11.8221016 6.7872966 9.0260841 12.5866807 8.8508004 11.9932929 11.8781507 8.2459790 9.8142591 9.9068906 12.1468586 13.1877376 7.2064508 8.9049922 0.6580058 7.7811013 9.7950053 10.302231 11.551619 3.950795 13.351325 8.157860 4.905943 9.984444 9.346097 8.538161 6.358454 4.218727 10.356372 8.579260 -1.663831 9.458267 3.143442 8.606989 8.256439 9.251219 9.969990 7.974522 10.641863 6.385935 4.859647 10.774667 8.696933 10.839912 11.485675 9.823926 9.543711 9.810806 10.124397 7.470512 8.660267 9.757236 5.803692 9.907365 4.336083 11.010940 4.266824 9.787297 8.587569 7.535758 14.354330 11.342412 11.153070 11.797693 10.675379 4.875244 2.336083 9.900712 9.373633 8.637582 TCGA-D8-A27E 66 0 NA 530 breast stage ia t1c n0 m0 female 2010 NA yes other, specify 0 white not hispanic or latino NA NA 3 5 2 2 4 1 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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10.2541102 10.0272887 10.5071314 9.8355532 3.5258434 7.9787087 12.6611741 11.6186067 10.1108120 8.7775686 -0.00166290 -0.00166290 -0.00443120 -0.00110870 0.00527490 0.00000000 0.00791750 0.00284500 0.00265300 0.00265300 -0.00041585 0.00013863 0.00013863 -0.00263220 -0.00263220 -0.00263220 0.00194180 0.00194180 0.00485790 0.00000000 -0.00202280 0.00513590 0.00513590 0.00513590 0.00097064 0.00097064 0.00097064 -0.00166290 -0.00166290 -0.00166290 0.00013863 -0.00443120 -0.00283620 -0.00401620 0.00000000 0.00000000 0.00791750 0.00284500 0.00284500 0.00180300 0.00180300 0.00265300 0.00000000 0.00000000 0.00000000 0.00000000 0.00013863 0.00013863 -0.00263220 -0.00263220 -0.00263220 -0.00263220 0.00194180 0.00194180 0.00194180 0.00485790 0.00000000 0.00000000 -0.00097017 0.00000000 0.00513590 0.00513590 0.00110930 0.00097064 0.00097064 -0.00166290 0.00208050 0.00819590 0.00819590 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.6907565 NA 3.1581108 10.0723581 11.3974468 8.1377008 11.3692996 9.2754643 9.0904412 -0.7961098 12.1820956 10.3613442 2.7888736 5.0865630 3.7585057 8.2387205 3.8477765 10.3399513 11.6759776 10.4577689 9.3209151 1.6633446 7.7813505 10.3872466 5.1464353 4.0619058 NA NA 10.0260939 6.3887974 4.8186307 8.5156699 4.0112720 10.5971993 10.0773656 3.9852818 7.4182406 -0.7961098 8.2537700 13.1399152 8.5348382 7.3562063 NA -1.7958593 8.1595712 3.3332090 3.9318438 0.7888527 3.7888840 7.0350388 1.6633446 10.0926647 -0.7961098 7.5031293 10.4601302 9.7556297 4.6796546 9.7977794 12.4598352 7.6897506 1.2038902 2.7274849 12.6640573 1.3738431 NA 1.3738431 -1.7958593 14.4683965 3.6301841 9.4613094 12.4444147 10.7418678 11.0104710 13.8366327 12.6898765 9.0850355 10.7413825 12.5035588 11.5223230 9.0272887 6.2753833 -0.2110638 7.1954431 11.1849535 10.7577907 12.1013888 8.6654009 14.6012610 8.4613092 7.9787087 9.0193047 7.9244735 9.8096186 6.6917617 6.0431257 11.9100937 7.5636707 1.5258684 11.9708644 5.4893246 5.7120344 11.0494115 10.0379974 10.9015406 9.1675401 8.6826909 11.7209756 4.4707060 11.8060473 10.8634714 10.5339980 9.7860634 11.7754371 9.1287339 9.7382244 10.4473930 9.7785150 NA 9.4372714 10.5939695 10.7435650 2.9588056 11.6510047 7.7851222 11.0867555 10.3058971 7.1982751 14.2977502 10.7827658 10.4521456 13.2257690 9.1145641 0.2038902 NA 10.7740143 10.8716983 9.4875886 TCGA-D8-A27F 40 0 NA 488 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.28315e-06 3.81477e-07 4.08163265306122 20.4081632653061 8.16326530612245 38.7755102040816 28.5714285714286 10.6775324 9.7466833 11.0179918 10.5097821 9.2730300 8.7562000 9.5207247 11.2313954 12.6568136 12.8996863 9.9151425 10.8653398 1.4369613 11.9060108 3.5073634 10.8444598 4.8565177 7.7018914 8.5265626 6.2749232 -0.2999155 7.9683609 9.4442871 9.8809509 11.0230687 7.9224066 2.0219416 7.1484745 11.9042794 -0.2999155 8.4737025 8.3771463 NA 3.7874743 9.5533234 10.5711492 9.9699199 9.2812146 10.0472663 11.9183754 1.4369613 8.6725152 16.2328924 8.2321619 10.9745862 10.9280309 10.7772748 2.9730234 0.1150332 9.6834826 11.4279344 NA 10.3275478 5.0692467 6.0634188 5.6307520 8.3208448 11.8724415 9.3611983 12.0599465 13.0828181 6.3582257 10.5262976 10.5879402 11.0985795 11.4669569 5.3534574 11.7611601 9.6527552 -0.2999155 10.6191256 9.8067950 3.9481990 4.6386126 8.8506075 10.7316003 11.5402674 10.0553650 4.8292965 7.1374195 12.8329420 11.5019917 9.8497612 10.1532846 0.0397610 0.0259520 -0.6149900 0.0668020 -0.6054500 -0.0287650 0.1382000 0.1382000 0.0000000 0.0000000 0.6059300 -0.6449900 -0.6136400 0.0171240 0.0022193 0.0022193 0.1103800 -0.6134500 0.0146090 -0.6096000 0.0190830 -0.6377400 -0.6377400 -0.6313100 -0.0666540 -0.1242100 -0.6719600 0.0098669 -0.6590100 0.0231450 0.0336900 -0.6149900 -0.6253200 -0.0347680 -0.6153700 -0.6153700 0.1382000 0.1382000 0.7467000 -0.0134020 0.0884030 -0.6623600 -0.6185300 -0.6185300 -0.6208300 -0.6208300 -0.6136400 -0.6222600 -0.6164300 0.0022193 0.0084743 -0.6323500 -0.5284900 -0.6134500 -0.0304040 -0.6191100 -0.6116200 0.0274970 -0.6332000 0.0119580 -0.0235660 -0.6377400 -0.6215900 0.4837200 -0.6719600 -0.6346200 0.5604500 -0.0260300 0.4899200 -0.622 -0.622 0.000 0.000 -0.613 -0.613 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.625 0.000 0.000 -0.607 0.138 0.138 0.000 0.000 -0.627 0.000 -0.621 -0.621 -0.321 -0.321 -0.622 -0.622 0.000 0.000 -0.613 -0.613 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.625 0.000 0.000 -0.607 0.138 0.138 0.000 0.000 -0.627 0.000 -0.621 -0.621 -0.321 -0.321 8.6849071 -1.8847004 5.9542545 10.3923389 11.8721289 5.3757345 10.6230938 9.8498331 7.1529277 2.1150665 12.9857051 11.2610759 5.4459683 NA 3.5073634 8.8102799 2.2849878 8.4437264 11.1065733 10.9681660 9.4599021 -1.8847004 8.8840627 9.4841035 5.4987551 4.2235770 0.9224262 1.5744891 11.2779148 5.4188309 7.2443343 9.2372324 9.7870347 9.7666997 11.2506004 -0.8849668 8.7874769 2.7000179 7.0980447 13.3197754 8.7741555 10.8446722 -0.8849668 4.0219416 7.0007482 4.9854139 3.0219416 NA 3.4726047 2.2849878 1.9223882 11.6638734 6.8258581 10.6435056 12.0983123 9.6008808 5.9224072 8.1178664 11.4075169 8.6277918 5.5413166 2.7589001 10.7678964 2.1150665 1.4369613 1.9223882 8.3171752 12.050742 8.399297 7.958973 11.906011 10.026069 10.639103 6.274923 11.932135 9.649247 11.165240 13.005648 10.785929 9.683483 6.896411 1.815493 7.709376 10.797388 10.6141499 11.9466556 8.5513884 13.4212552 8.8318709 7.3438706 8.7306810 5.3245046 9.3935067 4.9976944 4.7149653 9.9151425 8.7037662 -0.8849668 11.0750534 9.4090977 10.7496901 13.9725222 9.5912914 10.9691406 7.7857075 7.9792377 9.7989233 5.4726047 10.9940335 9.9699199 9.3042582 10.1881889 13.1312068 11.6580833 10.8626151 10.5808729 10.1037362 NA 9.7298763 8.3206738 11.4279344 5.1374175 10.3275478 7.7962902 9.5071756 8.3208448 7.6831596 14.0507688 9.6624281 10.7848224 13.0249914 11.8319781 3.1150499 0.9224262 10.3027128 10.8670139 9.1408832 TCGA-D8-A27G 75 0 NA 409 breast stage iia t2 n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 2 4 3 1 4 4 8 6 2 0 5 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 4 0 4 0 0 0 0 0 0 0 7 0 0 0 6 0 0 0 4 0 0 0 0 0 5 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 7 0 0 0 6 0 0 4 0 0 0 5 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 2.389433e-05 6.693188e-06 7.58082497212932 79.933110367893 1.78372352285396 7.58082497212932 3.12151616499443 9.9460340 10.0724326 11.8034434 9.6178186 9.2623641 9.3458399 10.2973015 9.8801593 9.6046813 8.3700396 11.4781139 10.3436851 1.1802115 14.2236818 3.1802115 9.2872453 6.3035981 8.3212273 8.7683944 13.4548012 NA 13.4125931 2.8322824 8.9849268 10.6863101 8.1294165 -1.6272707 9.1818244 9.5920287 2.5427781 7.8095714 6.6992893 NA 4.8647111 9.4382762 11.2267545 9.3270565 12.7584529 10.5490333 11.4942317 1.5428028 11.9351026 14.7290026 7.3819608 10.2037714 10.8386816 11.4141770 5.9427162 5.7304117 9.5663856 11.5962585 NA 11.2816280 5.4172551 6.6302482 5.5920294 10.4810578 11.7146569 10.4550092 11.8735775 13.0776824 8.2707055 11.1944349 10.7553437 11.2887395 11.3199491 4.8964220 12.5043152 12.2827532 -0.6270479 10.2838776 8.8727060 3.2372884 5.8240703 9.7886019 10.3024884 9.9657843 9.8601977 2.6207975 9.4669378 13.8563925 11.6167779 10.4018022 9.2370462 0.46964000 0.46964000 -0.00357070 0.00013863 0.00208050 0.00166420 -0.00470790 -0.04447900 0.00263570 0.00263570 0.00000000 0.00305220 0.00305220 0.00861350 2.33910000 1.04640000 0.00240570 0.00240570 -0.00166290 0.00124810 -0.00083160 3.39790000 0.81942000 2.28380000 -0.02151000 -0.02151000 -0.02151000 -0.00180140 -0.00318590 -0.47733000 -0.00263220 0.00249690 0.00208050 0.00208050 0.00166420 0.00166420 -0.00470790 -0.04447900 -0.04447900 0.00194180 -0.00456950 0.00263570 0.01167900 0.01167900 -0.00613350 -0.00613350 0.00305220 0.00305220 0.01000600 -0.49788000 -0.48087000 -0.50658000 0.00240570 0.00000000 0.00000000 -0.00166290 0.00124810 0.00124810 -0.00083160 -0.49486000 -0.50006000 -0.49246000 0.00736090 -0.56206000 -0.02151000 -0.01711600 0.00166420 -0.00373950 -0.00373950 0.000 0.000 -0.467 -0.467 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.467 -0.467 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.465 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.06808820 4.07329755 6.03819691 10.73013723 12.20000434 6.54838422 11.37303625 9.02315803 8.45922217 3.65825719 11.39019051 11.36914647 1.54280283 3.12774882 4.23084089 7.83638431 3.73041171 11.01739242 11.10714638 10.99445414 9.59927241 6.74354728 7.85868973 10.10417912 7.59202865 5.24322350 -1.62727073 NA 10.41486141 5.70377625 8.88856001 7.37567547 5.01671470 9.94214616 10.27975078 4.32705497 8.75656433 -0.62704790 7.77587230 12.63458780 8.32268666 6.74354728 NA 3.54279045 8.68800967 -1.62727073 5.49180180 NA 6.66287911 5.01223791 3.12774882 10.54278513 NA 7.30063810 10.29358511 9.78225112 4.83229256 9.66460639 13.37532357 9.03641816 4.12774882 4.52260821 10.76490915 1.83228244 NA -0.04215967 1.37284069 13.3978409 6.1143275 8.6396468 14.2236818 10.1046035 10.8727060 13.4548012 11.6814836 10.0345759 10.8374059 13.3168400 9.3707452 9.5663856 11.1828292 0.6947465 8.8199434 11.0845271 11.5855085 12.2805958 6.1007801 13.8804687 8.0939594 7.2797508 8.5352513 8.1244041 10.5233119 7.2370464 6.4117787 11.4781139 4.9120175 -1.6272707 10.5725325 4.8485929 7.6177951 11.5858124 10.4553418 10.8478335 7.4839955 9.3124394 11.8393190 6.2120635 11.7064865 9.3270565 10.4725367 9.1344114 10.9641487 9.8526405 10.2950729 10.2489934 9.0435165 2.1802115 9.2189695 8.4864328 11.5962585 6.1542207 11.2816280 8.2932132 11.4896914 10.4810578 6.7864879 13.0842582 10.3404467 10.0198688 12.1720406 10.4636342 3.0733061 -0.6270479 10.4230489 10.5031089 9.8307540 TCGA-D8-A27H 72 0 NA 397 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma NA white not hispanic or latino NA NA 4 4 6 1 5 5 2 7 6 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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10.8830757 11.4990795 11.9160356 4.7755879 12.8742135 9.7688107 9.0442482 10.9171855 8.3022839 2.9051968 5.2738403 8.7169302 10.4266409 10.9774680 9.9233030 5.8882903 4.3363048 12.9451385 11.5869639 9.0637631 9.9324308 0.0095883 0.8022800 0.4337800 1.1806000 -0.0167040 1.4469000 -0.6830500 -0.0127130 -0.6394400 0.0197830 1.0865000 -0.6333900 0.0044411 0.0000000 0.5394200 0.5394200 -0.0257560 0.0045800 0.4026100 0.0143300 1.6495000 -0.6121000 -0.6121000 0.6375500 -0.0124380 0.0075000 0.0075000 0.5617000 0.0259520 0.5640100 0.5232800 -0.6296900 0.0058309 -0.5974000 -0.6406700 -0.6340900 -0.6830500 -0.0121620 0.0966700 0.0148880 -0.0063668 -0.6394400 -0.0120240 -0.6151800 -0.0052610 -0.6247800 0.0044411 -0.6844200 -0.6333900 0.0083351 -0.0523960 -0.1072300 -0.0257560 0.0045800 0.0045800 -0.0461770 0.0048579 0.0048579 0.3490900 0.0400440 -0.6298200 -0.5878400 0.3265600 -0.0421100 0.0075000 -0.6599400 -0.0098185 0.0803120 0.8558100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.612 0.000 0.195 0.195 0.000 0.000 0.000 0.000 -0.605 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.597 -0.597 0.507 -0.642 0.000 0.000 0.000 0.000 -0.634 0.534 0.000 0.000 -0.326 -0.326 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.612 0.000 0.195 0.195 0.000 0.000 0.000 0.000 -0.605 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.597 -0.597 0.507 -0.642 0.000 0.000 0.000 0.000 -0.634 0.534 0.000 0.000 -0.326 -0.326 9.76597690 5.98504268 5.93747623 11.44854487 11.29089480 5.96667732 10.69891672 9.38277899 8.20027629 0.03857665 11.28120230 12.72613418 8.96244636 NA 4.18157966 8.61731097 4.66311687 9.80349522 11.85320611 11.13204121 8.19344158 3.81121412 8.22515055 10.44518301 6.06837201 4.82870266 3.03862932 NA 10.99765957 6.89660487 6.68247919 8.92126672 11.69057223 8.80999219 10.32710528 3.26101924 8.12431728 -1.54624539 7.20520481 12.82414421 7.93141950 7.00440813 -1.54624539 2.03861177 8.13489961 5.99282054 4.20854847 1.03864688 3.84598174 5.20854847 7.36055215 10.89219307 0.45364927 12.58800721 10.51806711 10.04424820 6.20854847 8.64101308 12.87250200 7.77784181 2.91309046 3.97722496 10.40713007 3.94551407 7.77107344 NA 5.12608494 13.721137 6.459286 8.127854 12.087678 10.411822 10.519077 6.273840 14.093341 9.335540 11.393240 12.198915 8.420887 10.379216 7.996693 2.261019 9.124317 11.648418 10.512329 12.524788 4.038621 14.631137 9.316299 4.896606 8.013994 5.126085 9.531979 6.419446 6.743681 10.467682 8.663114 5.261015 10.664637 7.725124 7.946316 14.180544 9.102917 10.581011 7.459286 8.835204 10.637297 6.126087 10.917806 8.968375 9.447307 9.398373 12.975200 11.212093 11.027072 10.340120 9.587445 NA 10.115163 7.766318 10.034391 5.682481 11.377360 9.145405 9.611640 10.295619 7.882021 13.689301 10.017334 10.644103 12.270445 10.307361 1.260989 NA 10.209800 10.462790 9.345445 TCGA-D8-A27I 58 0 NA 439 breast stage iiia t1c n2a m0 female 2010 NA yes infiltrating lobular carcinoma 4 white not hispanic or latino NA NA 1 3 4 3 3 4 4 3 6 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.080784e-07 25.9259259259259 18.5185185185185 3.7037037037037 22.2222222222222 29.6296296296296 10.3269521 10.3541918 11.5370866 9.8082106 8.4513912 9.3906696 9.7331235 9.7940711 10.0230793 10.8661285 10.9957462 10.4896204 2.6136967 12.5365204 4.3711197 9.1965023 5.5342546 8.8370006 8.9192072 11.7038007 1.8063241 12.9072147 6.1929141 9.4906730 10.9405457 4.3298986 NA 11.8882606 9.7687474 4.1755645 8.9043655 7.9218106 0.8063653 5.5251512 9.6730972 10.4366005 10.1021023 11.4752184 10.1241229 11.4576841 2.6807969 10.8679296 14.4607083 8.3030008 9.9330379 11.4986583 11.0978878 5.9961582 1.6808194 9.3749230 11.9370112 -1.7784322 10.6460621 6.3609226 6.7566457 6.1929141 10.0275176 11.8434227 10.2423509 12.0475221 12.7562209 8.2616606 10.9920348 10.6454532 11.2696875 11.0992301 5.1161901 11.5628897 11.5470979 -0.1936347 10.6048051 8.9978039 4.0372065 6.0479200 11.0349517 9.7429713 10.1802860 9.8222129 4.1755645 9.1402342 13.5668454 12.2511757 10.3341362 9.4507906 0.3888700 0.3915200 -0.0119890 -0.0119890 -0.0056942 0.2313600 0.0036534 0.0000000 0.2462600 0.2462600 0.2462600 -0.1224800 -0.1224800 0.0175800 0.0175800 0.0175800 0.0055884 0.0055884 -0.2361500 -0.2258500 0.0069791 0.0060055 0.0060055 0.0060055 0.0068400 0.0068400 0.0068400 0.2746200 -0.0979890 -0.1007600 -0.0238830 -0.0119890 0.0209390 -0.0066078 0.2313600 0.2313600 0.0036534 0.0000000 0.0000000 0.1458100 0.0980160 0.2462600 -0.0231100 -0.0231100 -0.0231100 -0.0157060 -0.4853100 -0.1307900 0.0175800 0.0175800 -0.1909600 -0.2457200 0.0055884 0.0055884 0.0055884 -0.2361500 -0.2299800 -0.2299800 0.0069791 -0.1473000 0.0060055 0.0060055 0.0065618 0.0068400 0.0068400 0.2618900 0.0039209 -0.2353000 -0.2353000 -0.122 -0.122 0.000 -0.191 0.000 0.000 -0.236 -0.230 0.000 0.367 0.220 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.288 0.275 0.275 0.000 -0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.231 0.231 0.000 0.000 0.000 0.000 0.246 0.246 0.000 0.000 0.000 0.000 -0.122 -0.122 0.000 -0.191 0.000 0.000 -0.236 -0.230 0.000 0.367 0.220 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.288 0.275 0.275 0.000 -0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.231 0.231 0.000 0.000 0.000 0.000 0.246 0.246 0.000 0.000 0.000 0.000 8.2780085 -0.1936347 6.0855564 10.0447381 10.8993107 7.0042710 10.7730791 9.8484943 8.5447072 6.8795820 11.6209158 11.6661308 2.3088268 4.6136908 4.1040179 8.7172261 3.8652260 10.4516916 11.3469458 10.7417440 9.1506292 5.9829229 7.5833145 9.8786893 7.9078713 9.0886497 0.8063653 -1.7784322 11.3081706 7.3429040 7.7410071 8.2807156 7.5251520 10.2145322 10.4772846 5.2657632 8.4549906 NA 8.6039949 12.6634720 9.3487204 8.0699937 NA 6.2712202 8.4320424 -0.1936347 3.9762628 5.0542624 6.4356903 5.9106008 3.9218076 10.3111524 2.1282604 9.9560805 10.4513913 9.9270032 5.3088341 10.0901934 11.9048042 9.7735596 3.5432979 4.7912254 11.3164382 0.5432979 -1.7784322 -0.7786797 2.8063241 12.6390593 4.8937942 8.4951663 12.5365204 9.7581038 10.5556442 11.7038007 12.1684598 9.3253142 10.8973279 13.6448479 11.7817037 9.3749230 9.6920298 0.2213203 7.4405395 11.5452701 11.4618641 11.2720698 7.3403121 13.5953229 9.1192164 7.7251965 8.7912264 8.6158338 10.1701322 7.5855057 7.3351134 10.9957462 6.9729155 5.2437376 10.8070376 6.7950175 7.4363942 11.4727054 10.5305630 9.8760068 8.6601628 8.5331191 12.7224616 7.5455514 12.9077756 10.1021023 10.0758497 9.6142249 11.1936327 10.3422567 10.3554763 10.5288563 9.0035500 0.8063653 9.2187620 7.9945927 11.9370112 7.4210432 10.6460621 7.9509915 10.7274305 10.0275176 7.6539127 13.8534567 9.9411875 10.2157243 12.7106544 10.4344751 5.2874612 0.2213203 10.2732596 9.9712403 10.1051597 TCGA-D8-A27K 47 0 NA 1461 breast stage iib t2 n1a m0 female 2011 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 3 5 2 2 4 4 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.387189e-07 27.7777777777778 11.1111111111111 5.55555555555556 33.3333333333333 22.2222222222222 10.9024011 10.0933885 12.1974752 10.2616403 8.3925188 9.5630649 10.5711161 9.9043634 9.9657843 11.9819013 11.1363877 10.4267099 5.8811384 13.4116138 4.8570255 9.6214865 7.2608744 8.6862130 10.4845793 13.1228111 4.0537196 14.1716145 7.7563308 9.1378644 10.8598083 5.0677936 NA 8.8930442 9.5125054 4.1886462 8.9204502 8.4297783 0.9662828 4.0251440 10.2153675 10.7517065 10.4504056 11.7690396 11.1536061 12.3819958 6.2761095 11.8310850 14.5431516 9.0091081 10.0677745 11.9555302 11.8486423 5.2516547 4.0251440 9.3038759 12.2826298 -1.6188274 11.4490620 4.2639358 6.7906821 4.6101094 10.7371932 12.0584606 10.6850723 13.3328494 13.1865819 8.1494758 11.2048578 11.1246112 11.5548125 11.5308798 5.4365750 11.8330177 10.5383225 NA 10.1671525 9.1494758 4.4043241 6.1428423 11.0246968 10.6739007 10.1634707 10.0851950 2.5512207 10.2520415 13.7149011 12.8083424 10.5278602 9.8407232 0.92452000 0.92452000 -0.00456950 -0.01519100 0.00000000 -0.00618050 -0.01147300 -0.01147300 0.00847430 0.00847430 0.00847430 0.00833510 0.00833510 0.00319100 0.00319100 0.00319100 -0.00330380 0.00194180 -0.00328440 0.00569190 0.00235810 -0.00235530 -0.00235530 -0.00235530 0.00124810 0.00124810 0.00124810 0.01377200 -0.00332430 -0.00332430 0.00000000 -0.00456950 0.00000000 0.00000000 -0.00618050 -0.00618050 -0.01147300 -0.01147300 -0.01147300 0.43855000 0.44088000 0.00847430 -0.01546600 -0.01546600 -0.01546600 -0.02538800 0.00833510 0.00833510 0.00319100 0.00319100 0.00319100 0.00319100 -0.00330380 0.00194180 0.00194180 0.00055459 0.00569190 0.00569190 0.00235810 -0.52102000 -0.00235530 -0.00235530 0.00750000 0.00124810 0.00124810 0.01377200 -0.00691950 -0.01574100 -0.02259400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.474 -0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.925 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.439 0.439 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.474 -0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.925 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.439 0.439 0.000 0.000 0.000 0.000 0.000 0.000 7.47404903 NA 4.42568756 10.23069658 11.48047487 6.61864538 11.37617522 9.40888654 8.07060829 2.84072506 12.08357240 10.62791931 1.96624587 1.38128337 4.70321701 8.98027441 3.33548326 10.34418748 11.49584723 11.29249621 9.21101414 4.10921010 7.65508702 10.39635807 7.61011019 4.53103829 1.18865412 NA 11.00013581 5.45810635 6.95493841 8.18380805 8.86611423 10.48180276 11.01269590 6.11600079 8.27307524 4.26393581 9.19025557 13.29474193 8.58708478 6.34129376 -0.03371721 1.70323362 8.56120048 0.38128337 3.66668843 NA 6.12948498 5.83357323 3.46875273 10.13868151 NA 9.17000991 10.56957122 9.71835580 4.73884348 9.27762380 12.55364086 8.87314447 3.38129722 3.77360607 12.40339918 0.96628279 NA 3.33548326 2.08171457 12.8136944 5.1886462 9.0359276 13.4116138 10.3692660 10.8065074 13.1228111 12.6266956 9.5008162 11.1777063 13.7486380 9.5729677 9.3038759 8.7222542 0.9662828 7.4872001 11.9251692 11.469417 11.852967 7.873144 13.880855 9.312768 7.172455 9.274593 8.708844 10.611378 7.152781 8.234601 11.136388 5.648077 7.910722 11.745973 8.306104 6.729710 13.111018 10.857531 10.850933 8.243759 7.349958 12.313229 7.578509 12.061253 10.450406 10.253197 9.985845 11.272126 10.019275 10.738843 10.773341 9.454764 1.381283 9.576670 7.914446 12.282630 7.756331 11.449062 7.285174 11.067685 10.737193 7.703220 14.108414 9.623275 10.403312 13.533022 10.938276 4.081732 0.363115 10.789090 10.766345 10.323439 TCGA-D8-A27L 49 0 NA 499 breast stage iiia t1c n2a m0 female 2011 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 3 3 2 2 3 4 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 2.080784e-07 30 36.6666666666667 0 23.3333333333333 10 10.7434244 10.2531585 11.9506651 10.3714154 8.0100245 9.5037621 10.2813699 9.7285359 9.8596202 13.0781027 11.2357686 10.3942368 7.8017071 12.6626435 3.7299116 9.7303766 4.9480962 8.7345098 9.9329898 12.5117446 6.1650557 13.4075643 7.7427406 9.3900799 11.1159110 5.3440260 -1.8847004 12.3084533 10.1274821 3.6070580 8.5633229 7.8139113 1.2851063 5.9289885 10.2318756 10.3515200 10.3690542 12.4681467 10.4303563 11.8089115 10.2772833 11.5029548 14.7142042 9.2482782 10.0265875 11.8912285 11.5787311 5.2341487 5.6697950 9.2807418 12.1012265 NA 10.9106376 7.1095601 6.8998415 5.5909403 10.5589274 11.7251934 10.2655887 12.5452672 13.0274880 7.9079968 11.1130919 10.6782766 11.4975606 11.4045052 5.5414715 12.2600243 11.6825687 -0.2999155 10.3916220 9.5005300 4.9615724 5.9606970 11.2132388 10.6150526 10.1046012 10.4343143 5.1264360 9.8579372 13.9001227 12.5973214 9.9859568 9.6239919 0.00917050 0.00917050 -0.04698900 -0.04698900 0.00332990 0.00000000 -0.00193990 -0.00193990 0.42435000 -0.28501000 0.64873000 -0.00277070 -0.00816240 -0.00553750 -0.00553750 -0.00553750 -0.00318590 -0.00249380 -0.01532900 0.00410690 0.00027728 -0.00415460 -0.00415460 -0.00415460 0.00694350 0.00694350 0.00694350 0.41798000 0.00917050 0.00917050 0.00000000 -0.04698900 0.00332990 0.00332990 0.00000000 0.00000000 -0.00193990 -0.00193990 -0.00193990 0.00097064 0.00097064 -0.45319000 -0.00360110 -0.00360110 -0.00360110 -0.00360110 -0.00816240 -0.01425500 -0.00553750 -0.00553750 -0.00553750 -0.00553750 -0.00318590 -0.00249380 -0.00249380 -0.01532900 0.00541390 0.00541390 0.00027728 -0.47596000 -0.00415460 -0.00415460 0.00124810 0.00694350 0.00694350 0.41798000 -0.00387790 -0.31354000 -0.31354000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.296 -0.440 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.418 0.418 0.000 -0.314 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.029 0.556 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.296 -0.440 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.418 0.418 0.000 -0.314 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.029 0.556 0.000 0.000 0.000 0.000 8.0996250 -1.8847004 5.1596009 10.2250374 11.1049560 7.0822885 10.8677965 9.5238124 8.4708000 2.4371478 11.9099272 10.8622332 2.0220837 3.3246666 4.5581513 8.8957464 5.2750778 10.5040313 11.4268132 10.3044136 9.1424216 2.0220837 7.9762937 9.9108406 7.2470635 5.5990232 5.0100234 NA 11.0637565 7.3890023 8.0039502 8.3392082 8.5695059 10.2869027 10.0156962 5.3631325 8.3050312 3.3631290 7.5807734 12.1909366 8.8558309 6.8363054 NA 3.1151997 7.6640284 3.1595969 4.0694014 1.2851063 6.0924865 5.9425802 4.9855733 10.3655051 0.7001733 8.6200259 10.4480824 9.5314764 5.3246594 9.4388245 12.3240507 9.1684538 3.9225594 4.2649567 11.3929300 6.1704899 NA NA 0.7001733 13.2003696 5.4371345 8.5990224 12.6626435 10.2278808 9.9669557 12.5117446 12.6156752 9.2662232 11.1517238 12.8467379 9.4017644 9.2807418 8.5425196 -0.2999155 7.3536118 11.8585685 11.352417 12.050095 7.446124 13.543074 9.088186 6.886696 9.533059 8.735427 10.514105 7.477150 6.846526 11.235769 6.801707 3.363129 11.229925 6.688855 6.984462 12.094364 10.555816 10.346128 8.686011 8.509669 13.306266 7.866751 12.656221 10.369054 10.334678 9.552959 11.690391 10.313038 10.718601 10.495938 9.689800 -1.884700 9.628969 7.778374 12.101226 7.384333 10.910638 8.862560 10.774179 10.558927 7.562290 13.618691 9.979006 10.211263 13.075254 10.606058 3.022101 2.870088 10.779209 10.644149 9.903925 TCGA-D8-A27M 59 0 NA 410 breast stage ia t1c n0 m0 female 2011 NA no infiltrating ductal carcinoma NA white not hispanic or latino NA NA 4 3 6 1 5 5 2 7 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.31783e-06 3.81477e-07 18.3673469387755 24.4897959183673 6.12244897959184 24.4897959183673 26.530612244898 10.8847063 9.8444469 11.6155979 9.5927700 8.6313652 9.8872881 9.5135525 10.4536837 10.8381521 12.7059887 10.6102089 10.3193440 0.8854182 11.1867165 3.3004459 10.6730414 5.6667708 8.7319459 8.5062417 5.6223769 2.3879139 9.0678051 10.1094125 8.8647504 11.3203865 5.6841539 -0.6994662 11.7844379 9.9334435 2.3879139 8.6155980 9.4501955 2.8854182 6.1269976 9.6414111 10.7490809 9.2590010 11.0690462 9.5759909 11.8489091 0.8854182 5.7350753 15.6686393 9.5400707 8.9622265 11.4514649 10.4976651 3.7267114 -0.6994662 9.7746612 11.0116852 0.3004166 10.8087383 8.4206862 8.1333385 7.2862907 10.7626950 11.6040864 9.7882885 12.0694597 13.0463327 7.8141761 10.9532933 10.6865749 11.6604724 11.9126258 5.5196174 11.9729842 9.5817988 3.9443056 10.7196186 9.6612955 3.8863160 6.5812187 9.2267443 10.5780264 10.5031844 10.9915376 2.8240142 7.9764055 12.5746809 12.3445009 9.6065101 8.9737573 0.0000000 -0.1270700 -0.2709300 0.0411750 0.2087000 0.0873900 -0.1086200 -0.3613600 -0.3723400 0.4830300 1.5159000 0.0552300 -0.3613600 -0.0024938 -0.0024938 0.2307100 0.5861400 0.0431570 0.1249100 -0.2753500 -0.1956200 -0.2914200 -0.2914200 -0.2638400 -0.2787000 0.6845900 -0.2942600 -0.3277400 0.1919300 0.0000000 0.3321800 -0.2924800 0.3685400 -0.1566300 0.0873900 -0.3272800 -0.5921400 0.0968160 -0.3516800 -0.1140500 0.1974000 -0.4013000 0.0342540 0.0342540 -0.0106460 0.0553730 -0.3613600 0.0421660 0.0348180 -0.0024938 -0.2934300 0.3473000 0.1124200 0.0431570 -0.3219300 0.0860880 -0.1403900 -0.1403900 -0.3612500 0.0146090 -0.2914200 -0.2914200 -0.1436100 -0.2787000 0.1998400 0.1379100 0.4857800 -0.0388500 0.3724900 0.000 0.000 0.000 0.000 0.110 0.110 0.000 -0.140 -0.303 0.000 0.000 -0.291 -0.291 -0.144 -0.144 -0.279 -0.146 0.000 0.000 0.138 0.138 -0.330 0.372 0.109 0.109 -0.271 0.000 0.209 0.209 0.000 -0.327 0.000 0.000 -0.342 -0.209 -0.372 0.111 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.110 0.110 0.000 -0.140 -0.303 0.000 0.000 -0.291 -0.291 -0.144 -0.144 -0.279 -0.146 0.000 0.000 0.138 0.138 -0.330 0.372 0.109 0.109 -0.271 0.000 0.209 0.209 0.000 -0.327 0.000 0.000 -0.342 -0.209 -0.372 0.111 0.000 0.000 0.000 0.000 7.5268607 NA 4.8396069 9.5208267 10.3421076 7.4237160 10.7713614 11.2347658 8.9089804 2.5483873 11.7744077 11.9179675 2.8854182 0.3004166 4.4703742 8.1568739 4.8082409 13.6821941 11.6211079 10.4908904 9.1380762 2.2073307 8.9243297 10.0360043 8.3958456 6.0146945 3.8240142 -0.6994662 11.2694751 4.0553345 7.6447446 8.9022192 4.2311866 9.8825903 9.9873865 4.5858519 8.5542957 NA 8.4284427 12.5701595 8.8318298 6.9764049 0.3004166 2.0009014 7.6133313 0.3004166 1.6223682 NA 7.0215475 5.2081817 7.1110198 10.4890372 5.5578359 12.9847587 10.6282817 9.2655112 5.1459383 10.0582551 14.6042469 8.9397890 6.8740961 4.9003597 9.8783492 2.5483873 5.8929058 0.3004166 3.8550329 13.623664 7.114230 8.577736 11.186717 10.456531 9.505020 5.622377 11.271453 9.360928 11.499507 13.169223 10.968003 9.774661 7.167727 3.000883 7.186145 10.742355 10.6483465 11.5352658 4.3228151 14.7636845 8.8012903 8.5590145 7.3338709 7.2691155 9.7089320 8.6380702 7.1078029 10.6102089 8.1412264 0.6223682 11.0170535 7.8082428 9.2006208 14.0180712 10.6375127 10.5037963 7.8759877 8.3393672 10.9332164 9.2170744 11.7345579 9.2590010 10.2374543 9.4988935 12.0806805 10.9812474 11.0905932 10.4803574 9.3859208 NA 9.5129022 8.3761949 11.0116852 9.3872481 10.8087383 9.0956763 11.0225685 10.7626950 8.2458921 13.0349463 10.4828427 10.4812900 12.7248115 9.8722010 6.7516592 2.1077883 10.7943038 10.2400276 9.9192927 TCGA-D8-A27N 36 0 NA 519 breast stage iiia t2 n2a m0 female 2011 NA no infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 1 2 6 1 2 2 1 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.144431e-06 2.427581e-07 32.5 17.5 2.5 27.5 20 10.581266406 9.751052756 11.581266359 8.788797601 10.088526437 9.370155996 10.406501381 10.125764996 10.268505158 14.167007978 9.960641009 10.804638215 0.405121035 15.615288902 2.405093798 9.869128343 7.326934567 8.362195456 10.096400494 12.731733364 NA 12.899198765 NA 9.384275426 11.070429111 8.454941628 2.492545424 9.944227714 12.255866082 1.990047220 7.980632581 7.202754651 -0.594878965 4.744941447 9.873208156 10.281993759 9.338046175 10.691939674 9.985351707 10.873462723 2.212444829 10.446752381 14.899292534 8.474717513 10.508046495 10.945221270 10.115469241 3.614544955 3.896949921 9.591826561 10.563071640 0.990083536 11.303505651 8.073978180 6.924729383 6.382373289 9.768680414 11.883230820 10.192995741 11.966858476 12.687168079 7.179880236 11.020033059 10.437755401 11.027602639 10.972336315 4.831360453 13.331157513 9.803836965 -0.009989098 10.358562197 8.896946289 2.205204813 6.497850241 10.100756545 9.507068949 12.859585295 9.432308044 2.212444829 10.505755591 12.896946308 11.393600411 9.544644571 9.520136785 0.4301700 0.5184900 -0.5559100 1.1254000 0.0277920 0.0176240 -0.0203340 0.0347580 0.0106430 0.0106430 1.3301000 -0.0131860 -0.0131860 0.0063273 2.9580000 -0.5176800 0.3681400 0.0091106 -0.5475600 -0.0018609 0.5045600 2.1081000 3.6569000 3.3768000 -0.1295900 3.4372000 0.3619100 -0.0375480 -0.0352350 0.0120370 0.0117580 -0.5559100 0.0277920 0.0397000 0.0275770 0.0347580 -0.0203340 0.0347580 0.0081360 0.0082752 0.0082752 -0.5730300 -0.5346400 -0.5362400 -0.0145620 -0.0295060 -0.0131860 -0.0131860 0.0063273 0.9979100 -0.5552100 -0.5552100 -0.5587100 0.0055601 -0.0491930 -0.5006300 -0.0018609 -0.0018609 -0.0293700 -0.0374120 -0.6048100 -0.6028800 -0.5646000 -0.1773200 0.3619100 -0.0375480 0.0179030 -0.1195900 0.0235060 0.000 0.000 0.000 0.000 0.000 0.000 -0.501 0.000 0.000 0.000 0.000 -0.593 0.000 0.479 0.000 0.232 0.362 0.000 0.518 0.000 0.000 0.000 0.000 0.000 0.000 -0.522 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.501 0.000 0.000 0.000 0.000 -0.593 0.000 0.479 0.000 0.232 0.362 0.000 0.518 0.000 0.000 0.000 0.000 0.000 0.000 -0.522 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 8.7952621 NA 5.2754578 10.1699648 13.4904412 6.7125669 11.2963073 8.8913852 9.0493370 -1.5950969 11.8447943 11.7365504 5.1330127 2.7974073 2.9900472 7.5317978 4.4494887 11.0799475 11.1942193 10.9264483 8.7725079 5.6718793 7.9227628 10.0453381 6.8848738 7.8397216 0.7270056 NA 10.9782670 6.4925566 6.5949172 8.4260731 4.1330127 10.2180126 10.0207229 1.7270056 8.8059728 NA 7.6290950 12.8486843 7.9711475 7.7292740 NA 1.2124448 7.6072171 5.5446430 4.2124448 NA 5.1995075 4.2405128 3.6145450 10.8981981 3.0489511 6.3239573 10.7354499 9.9281651 3.9900563 10.0285175 13.2614215 9.6893390 4.3358334 4.2630720 11.4376556 2.7974073 -1.5950969 -1.5950969 2.6530141 12.878065 7.742715 8.717976 15.615289 9.735450 10.915857 12.731733 12.111373 8.668362 11.152447 13.297636 9.566225 9.591827 9.706018 2.405094 10.078402 10.671001 11.0287461 12.6707082 7.4765559 13.6252811 8.7008621 5.8229468 8.5899687 7.3852326 10.2962276 7.5057552 8.8166042 9.9606410 6.8271585 2.6530141 11.1234120 4.5750158 8.3077095 11.2621022 10.5611763 10.7931105 7.8949414 10.0552475 9.3966151 6.5548405 13.4144460 9.3380462 10.6473741 10.6936709 10.5624401 9.9853517 10.8879012 10.6748044 8.4065014 0.7270056 9.0765901 6.9825225 10.5630716 6.4819092 11.3035057 8.2395642 10.9682895 9.7686804 7.6295533 13.7130766 10.7054458 9.8271580 12.1151463 10.8709146 -1.5950969 1.9900472 10.1749310 10.2284605 9.2669556 TCGA-D8-A27P 64 0 NA 49 breast stage ia t1c n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 5 2 2 3 4 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 27.2727272727273 0 9.09090909090909 31.8181818181818 31.8181818181818 10.5533971 10.1049405 12.0945800 10.1466574 8.0486253 8.9335954 11.3116150 9.4490983 10.1391159 13.4188457 11.4860307 10.3628040 2.7437735 13.4369502 3.8262332 9.2166409 7.3910176 8.6421499 10.2237888 13.4674819 5.5142896 14.2065737 8.4923584 9.3248117 11.3035415 6.9370783 0.6562675 7.6105044 10.1616233 2.4636748 8.3960884 8.2487649 -0.3437325 3.3001677 10.1044242 10.3145195 10.3454323 11.9440203 10.5282131 11.5747985 6.8461322 11.3463059 14.8087908 8.3410388 9.7778285 11.9889040 11.7679327 4.3842294 2.9042336 9.0825727 11.6864578 NA 11.2320835 6.0138597 5.2108953 4.8851253 10.4290349 11.7122682 10.4462491 12.1850062 12.9710328 7.9759798 11.0893717 10.9668185 11.6070460 11.4856343 5.6220928 12.1103501 11.0893717 1.2412911 10.2256889 8.9440203 3.7063758 3.3001677 10.8712341 10.0746877 10.1857385 9.9160513 4.5632008 9.3251930 13.0280846 12.0386618 10.4215940 9.7945798 0.56294000 0.56347000 -0.00304750 -0.00304750 -0.00373950 0.00000000 -0.00138580 -0.00373950 -0.00899060 -0.00899060 -0.00899060 0.00360760 0.00583090 0.00277450 0.00277450 0.00277450 -0.00152430 -0.00152430 0.00069327 0.00277450 0.00513590 0.00305220 0.00305220 0.00305220 -0.00041585 -0.00041585 -0.00041585 0.01293400 -0.00069303 -0.00069303 -0.00346270 -0.00304750 -0.00373950 -0.00373950 0.00000000 0.00000000 -0.00138580 -0.00373950 -0.00373950 0.01209700 0.01209700 -0.00899060 0.00388540 0.00388540 0.00388540 0.00388540 0.00583090 0.00583090 0.00277450 0.00277450 0.00277450 0.00277450 -0.00152430 -0.00152430 -0.00152430 0.00069327 0.00277450 0.00277450 0.00513590 -0.59097000 0.00305220 0.00305220 0.02665400 -0.00041585 -0.00041585 0.01293400 0.00027728 0.01852300 0.00555290 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1075189 NA 5.8851277 10.4978723 11.1023574 6.9169925 11.8772908 8.5424465 9.0024671 2.3567354 11.9639357 10.7646821 3.1798773 3.4111957 3.1157324 8.5220412 3.3001677 9.6083212 11.5615069 10.8959065 9.1720079 6.0909360 7.9486295 10.2988110 5.5751701 3.6104993 2.8262332 NA 11.0362277 6.4376672 7.3322649 8.1136890 7.5480913 10.5466634 10.9344670 4.7437735 8.2166406 NA 8.8498332 12.8252934 8.8035128 7.3808221 -0.3437325 1.6563133 8.4604391 5.6220928 3.9782322 -1.3437325 3.0486198 5.7185151 2.7437735 10.0904148 0.2412300 8.9532242 10.6467665 9.6779819 4.3001677 9.5848263 11.4045008 6.3977756 2.3567354 2.8262332 11.3705534 1.4636748 NA 1.4636748 1.2412911 13.8049779 4.2412682 8.8111261 13.4369502 10.3313829 10.8019217 13.4674819 12.1405015 9.3520668 11.0278124 13.0897630 8.7530232 9.0825727 9.3322649 0.6562675 7.8161792 11.6717230 11.176435 12.124550 7.036509 14.438691 8.965784 6.179869 9.279275 8.123261 10.550364 5.754340 6.156154 11.486031 6.233737 4.411196 11.034874 6.987225 5.564159 12.216999 10.364530 10.562071 8.375200 8.226164 13.635063 5.164102 11.498200 10.345432 10.221410 9.798415 11.574053 9.802877 10.169048 10.724078 9.565451 NA 9.398845 8.359571 11.686458 5.164102 11.232084 6.722398 11.029989 10.429035 7.492358 13.832551 10.032976 10.703773 12.916566 10.344995 NA -1.343732 10.878801 10.627851 10.161623 TCGA-D8-A27R 41 0 NA 307 breast stage iiic t2 n3a m0 female 2011 NA yes infiltrating ductal carcinoma 11 white not hispanic or latino NA NA 1 4 5 2 1 2 1 9 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.387189e-07 26.0869565217391 17.3913043478261 8.69565217391304 34.7826086956522 13.0434782608696 9.1865956 9.3155687 11.0103221 8.6519318 9.4872148 8.6762776 9.6719256 9.9669690 10.6264188 14.4762506 11.0413938 10.9653892 0.4532278 12.9695323 2.5907457 9.2214257 5.8386720 8.6321551 7.0590913 12.2295098 2.5236372 13.6448558 5.4259326 9.3503607 11.7251712 6.8727808 -0.2836675 9.3236061 10.7542802 2.9386622 8.3732963 6.3934076 -1.8688056 4.0620526 9.3383275 10.4504208 9.5209445 9.2612403 9.0382038 10.6719256 8.5225568 9.2253909 14.1731435 7.9912361 10.1299002 10.5630720 11.0836905 4.1974015 3.4888620 8.6868612 9.7354030 -1.8688056 10.4833567 6.3309850 6.0016784 5.4800421 9.9374600 11.6803759 10.0661098 11.3397000 12.4464628 8.5407042 10.7803448 10.1688877 10.4658658 10.7214324 4.3601325 11.4483018 8.5343255 -0.8688056 10.6721678 9.8689832 3.0458798 5.9257289 10.1362359 9.8006413 10.9740564 10.5496929 3.7460225 5.4167148 11.9596481 11.2319756 10.5716633 8.9752344 0.226690 0.404440 0.293900 0.222370 0.200910 -0.340670 0.200300 -0.353500 2.946100 0.482510 1.407900 0.227920 0.000000 0.214380 0.851850 0.245750 0.217140 1.341500 0.173020 0.221290 0.153670 -0.340440 0.384190 0.502210 -0.147980 -0.147980 1.191900 0.806940 -0.073209 0.226690 -0.354420 -0.358740 0.200910 0.200910 -0.321240 -0.052801 0.220060 -0.353500 -0.353500 -0.051451 -0.059000 -0.356700 -0.353730 -0.353730 -0.346300 -0.341250 0.000000 0.000000 -0.352480 0.232100 -0.335140 -0.335140 0.217140 0.214680 0.214680 -0.334330 -0.346300 -0.346300 0.153670 0.072684 -0.340440 0.502210 -0.158480 -0.147980 -0.147980 -0.361020 -0.055364 -0.057654 -0.057654 0.000 0.000 -0.121 -0.335 0.217 0.217 0.173 -0.325 0.154 0.000 0.000 -0.340 0.162 -0.158 -0.158 0.341 0.341 0.227 0.227 -0.361 0.807 0.000 0.000 0.133 0.000 0.222 0.222 0.201 0.201 -0.341 -0.341 0.205 -0.148 0.000 0.000 -0.357 1.408 -0.339 -0.339 -0.497 0.000 0.000 0.000 -0.121 -0.335 0.217 0.217 0.173 -0.325 0.154 0.000 0.000 -0.340 0.162 -0.158 -0.158 0.341 0.341 0.227 0.227 -0.361 0.807 0.000 0.000 0.133 0.000 0.222 0.222 0.201 0.201 -0.341 -0.341 0.205 -0.148 0.000 0.000 -0.357 1.408 -0.339 -0.339 -0.497 0.000 8.7340121 NA 7.6897339 10.3676265 12.9149766 6.0477303 10.7547375 8.1035894 8.4794658 3.7460225 11.6161361 12.3330114 4.8727795 -1.8688056 2.3012364 8.0650041 4.3407688 10.0162468 11.0996200 11.0838725 9.2657395 0.1313261 9.1585281 10.1393916 7.6548751 7.8978424 1.7162886 NA 9.9634121 6.1481206 5.9642022 9.0613112 9.1798001 10.8074687 9.8807637 1.8317557 9.3595306 3.0382079 7.0200565 12.5189940 7.3112224 7.2346010 -1.8688056 6.6665890 8.3186653 5.3981006 4.7011664 NA 6.4120837 5.3655071 3.9892934 11.4065648 NA 8.6479983 11.0756592 10.4880402 5.2187773 9.8028543 12.4040159 9.4253596 4.0382079 4.0855096 10.0359478 0.1313261 -0.8688056 0.9386998 3.4167182 13.838275 8.156453 8.520407 12.969532 10.095448 11.184051 12.229510 11.755423 9.432038 10.658504 12.528386 12.266221 8.686861 9.245055 1.716289 8.327301 13.623886 10.592793 11.803186 4.886199 12.954780 9.242449 6.557579 9.654385 9.220101 9.639261 6.896185 9.704960 11.041394 6.886200 2.523637 9.720964 5.001676 8.576111 9.871516 9.814747 10.109666 9.057609 8.281060 9.736793 6.020055 12.319478 9.520945 10.040456 10.582267 11.109487 9.752907 11.096196 10.086600 8.438514 4.701166 8.986213 6.234601 9.735403 6.678207 10.483357 5.453241 10.281378 9.937460 7.296221 13.369046 10.654385 9.842980 12.400367 10.311533 4.062053 1.938662 10.685902 9.108593 9.245055 TCGA-D8-A27T 53 0 NA 398 breast stage iiic t2 n3a m0 female 2011 NA yes infiltrating lobular carcinoma 12 white not hispanic or latino NA NA 2 1 2 2 4 4 4 3 6 2 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.387189e-07 30 15 10 30 15 10.7639016 10.1172395 12.0259955 9.6657019 7.7871033 9.2788599 9.8990768 9.7647268 10.0681664 8.8844709 11.6444864 10.5913601 2.8000405 13.2703137 3.4077198 9.5370077 7.9661455 8.0641494 8.7183376 12.9032051 3.2657069 14.1159465 5.3146168 9.2995084 10.4084290 8.3964096 -1.5924841 10.0872049 9.5795271 3.1081564 8.4259250 7.5701160 -1.5924841 5.0801502 10.2045755 10.2182963 7.9095619 12.0842329 9.7762312 11.8979489 -0.5922666 11.0411741 14.5184731 8.5120092 10.2402193 11.2596690 11.2156834 5.1219686 NA 9.1684447 11.8322848 -0.5922666 11.1413757 6.3206146 6.8255770 5.4951867 10.4714569 12.0048462 10.4027853 12.1631340 12.7699426 8.5485545 11.1812761 10.7550637 11.3434423 11.2532148 5.3735090 12.1205741 11.0286319 0.4077334 10.3871500 9.0695029 2.8710945 6.1692756 10.5041105 10.2953262 9.7685719 9.8686925 2.6556495 10.0551832 13.3821842 11.8432648 10.1271136 9.4885423 0.332050 0.349410 0.048404 0.048404 -0.558370 0.052241 0.035733 -0.576640 0.030591 0.030591 0.030591 -0.275590 -0.275590 0.018803 0.018803 0.018803 0.049966 0.049966 -0.219970 -0.190110 -0.010508 0.610090 0.638100 -0.592050 0.000000 0.000000 0.000000 0.013632 -0.301920 -0.263960 -0.255970 0.048404 -0.579860 -0.565340 0.051530 0.051530 0.035733 -0.576640 -0.613160 0.045566 0.045141 0.030591 0.037924 0.037924 0.037924 0.037924 -0.275590 -0.275590 0.018803 0.018803 0.018803 0.018803 0.049966 -0.587160 -0.615370 -0.219970 -0.190110 -0.190110 -0.010508 -0.601970 -1.258400 -0.616710 0.033972 0.000000 0.000000 0.013632 -0.271880 -0.264560 -0.264560 -0.276 -0.276 0.000 0.000 0.000 0.000 -0.220 -0.190 0.000 0.000 -0.602 -0.611 0.000 0.000 0.000 0.000 0.000 0.068 0.332 0.000 0.000 -0.272 -0.265 -0.265 -0.265 0.000 0.000 -0.580 -0.580 0.000 0.000 0.000 -0.577 0.000 0.000 0.000 0.000 0.000 0.000 -0.150 -0.150 -0.276 -0.276 0.000 0.000 0.000 0.000 -0.220 -0.190 0.000 0.000 -0.602 -0.611 0.000 0.000 0.000 0.000 0.000 0.068 0.332 0.000 0.000 -0.272 -0.265 -0.265 -0.265 0.000 0.000 -0.580 -0.580 0.000 0.000 0.000 -0.577 0.000 0.000 0.000 0.000 0.000 0.000 -0.150 -0.150 8.618396 NA 6.505758 10.170937 11.163030 6.855098 11.004846 9.278868 8.927901 4.655649 11.735418 11.172889 1.867145 1.729662 4.314617 8.013204 3.765280 11.231291 11.682540 10.766376 9.309346 6.567596 8.139044 9.847036 7.323604 7.179214 -1.592484 NA 11.187649 7.679188 7.353169 8.439771 7.552383 10.395646 10.259083 4.135642 8.862024 NA 7.660390 12.792643 8.219902 7.367727 NA 6.278089 8.111628 -1.592484 3.931286 -1.592484 6.516250 5.836921 3.867155 10.579527 -1.592484 8.313112 10.384647 9.272685 4.711506 10.049776 13.473646 8.602482 3.407720 4.338460 11.215281 2.495183 NA -1.592484 2.215088 13.588933 5.065934 7.526666 13.270314 10.294797 10.524069 12.903205 12.652683 9.554293 11.233280 13.295707 10.985626 9.168445 9.133943 1.215057 6.919477 11.679480 11.631274 11.721316 6.567596 13.583272 8.775139 7.055184 8.614739 8.421745 10.839909 7.497837 7.933246 11.644486 7.007637 5.253214 11.040947 6.396410 7.564592 10.700334 10.421047 10.481532 8.399247 8.874311 12.235067 6.871249 12.125025 7.909562 10.612907 9.936667 10.641045 10.104258 10.311983 10.888515 9.566334 NA 9.578532 8.797539 11.832285 6.854809 11.141376 8.593839 10.733592 10.471457 7.320614 14.099305 10.071283 10.487876 12.982200 10.772407 4.338460 -1.592484 10.460972 10.319117 9.537008 TCGA-D8-A27V 62 0 NA 381 breast stage iia t2 n0 m0 female 2011 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 1 2 3 3 4 5 3 1 1 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.271319e-06 1.699307e-06 9.95024875621891 70.1492537313433 2.98507462686567 11.9402985074627 4.97512437810945 10.5601966 10.7602874 11.9245024 10.1934406 7.6169803 9.0116446 10.7138420 9.5353341 9.4043808 12.5272068 10.5108653 10.5211969 1.9165531 12.2231089 4.2060493 8.2414713 7.0389376 8.5189305 9.0515374 13.3683815 1.0685332 12.7654245 4.5015028 9.1955425 10.9206051 8.4736855 NA 9.2459634 9.7062555 1.9165531 8.1085595 8.5089978 -1.2532573 5.7353001 10.0958970 10.3913734 10.3402403 12.2061755 11.2313128 11.6539759 -0.6684094 12.1168945 13.9295338 9.2779778 9.9496517 11.5042141 10.8600323 5.3465279 -1.2532573 9.5495360 12.4589816 NA 10.8887229 6.2101395 5.2935103 3.3613192 9.8083244 11.9722751 10.7037178 11.9442932 13.0920557 7.0297047 10.9311812 10.7831397 11.5493341 11.5785168 5.0864653 11.9182617 11.3444356 -0.6684094 9.5106580 9.5279754 3.3393655 5.1303214 10.5975839 10.5143864 9.4155007 10.4459713 4.1560082 10.3390728 12.8927071 12.4067231 9.9957293 9.2920630 1.12730000 1.14330000 -0.00995650 -0.01243800 -0.02192100 0.59314000 0.56863000 0.56863000 0.66826000 0.66826000 0.66826000 -0.00221680 -0.00221680 0.00027728 0.00027728 -0.63049000 -0.02082400 0.57523000 -0.02068700 -0.00995650 0.00508230 -0.00622860 -0.57970000 1.65860000 0.01153900 0.59836000 0.59836000 0.01750000 0.00499690 -0.04183800 0.00000000 -0.00995650 0.04202400 -0.01519100 0.59314000 0.59314000 0.56863000 0.56863000 0.56863000 -0.01890200 -0.02236200 0.66826000 0.59440000 0.10994000 0.59638000 0.67104000 -0.00221680 -0.00221680 0.00027728 0.00027728 -0.63049000 -0.62998000 -0.00539920 -0.63604000 -0.61412000 -0.61633000 -0.00995650 0.00458000 0.00996090 -0.62303000 -0.00622860 -0.57970000 -0.01780300 0.01153900 0.59836000 0.01750000 -0.00443120 0.02202400 0.03284500 0.000 0.000 0.000 -0.630 0.000 0.000 0.000 0.000 0.000 -0.044 -0.623 -0.543 -0.543 0.000 0.000 0.598 0.598 0.000 1.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.593 0.593 0.569 0.569 0.000 0.000 0.668 0.668 0.596 0.596 0.114 0.114 0.000 0.000 0.000 -0.630 0.000 0.000 0.000 0.000 0.000 -0.044 -0.623 -0.543 -0.543 0.000 0.000 0.598 0.598 0.000 1.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.593 0.593 0.569 0.569 0.000 0.000 0.668 0.668 0.596 0.596 0.114 0.114 8.46771477 1.83406394 4.33157625 9.65313062 11.00724134 6.23039133 11.61167239 8.97590327 7.77396864 3.36131920 12.05949873 10.80819622 1.83406394 2.60459326 4.30120717 8.30312180 3.36131920 10.54731351 11.74441270 10.94413963 9.70625546 6.20194354 7.45397514 10.11566782 6.70371812 7.83540431 4.44705677 NA 11.51179826 8.24646177 7.66100061 6.84201336 5.24646129 9.94123721 10.48723982 4.18955576 8.03432798 -2.25360123 8.28771238 13.00278760 7.52140257 7.14749496 NA 0.74665674 9.03663465 1.83406394 5.50150284 NA 5.13893321 4.60085846 2.91653397 9.90648704 -0.66840942 8.73601017 10.89763229 9.92122937 4.93644007 10.06431097 13.25177602 8.50150324 1.65351867 4.06854184 11.44108249 0.06860203 NA -1.25325728 0.06860203 12.971520 4.641436 8.489767 12.223109 10.518724 10.973630 13.368381 13.018298 8.559218 10.981732 13.024775 9.681412 9.549536 9.770717 2.553975 8.688397 10.872675 11.23257083 11.65997271 6.92652491 14.41085289 9.04525128 7.99809845 8.57395841 7.36500133 10.95027885 6.00871097 7.56199890 10.51086532 4.86555760 2.39047509 11.37004006 7.96578428 6.20531040 11.56359937 11.00988494 10.84497686 8.43224080 7.64597251 13.23655778 5.68913140 12.49505550 10.34024035 10.70589326 9.32922812 11.69826476 9.89031779 10.37186799 11.09243679 9.47198201 0.06860203 8.32905900 8.25604447 12.45898155 4.22234862 10.88872286 3.17288750 10.86512862 9.80832439 7.81001116 14.05164364 10.38979555 10.39654549 12.01902685 10.04353193 1.55395024 NA 10.44640512 10.91089422 10.30933515 TCGA-D8-A27W 55 0 NA 373 breast stage iiib t4b n0 m0 female 2011 NA yes mucinous carcinoma 0 white not hispanic or latino NA NA 1 2 2 2 1 1 1 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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10.2792616 10.3138846 10.7849760 11.1597785 4.0606613 6.4244115 11.3750128 10.6889474 9.6264928 8.5335326 0.4461200 0.5713000 -0.0396650 -0.0396650 0.3236600 0.2325100 0.0087528 -0.5851000 2.4772000 0.0592230 2.3082000 -0.0927420 -0.0927420 -0.2477800 1.4613000 -0.3075700 0.4454500 0.4454500 0.1081800 0.4582000 -0.0550950 -0.0977310 0.9371200 0.9371200 0.3782500 0.7372000 0.7372000 0.8184500 -0.2366700 -0.2366700 -0.6594700 -0.0396650 0.3236600 0.3236600 0.2325100 0.2325100 0.0087528 -0.5851000 -0.5851000 -0.0927420 -0.0927420 -0.4972600 -0.2931300 -0.2931300 -0.2931300 -0.2931300 -0.0927420 -0.0927420 -0.2477800 -0.3219300 -0.2967400 -0.2967400 0.4454500 0.4454500 0.0000000 0.1081800 0.4582000 0.4582000 -0.0890370 0.4151300 -0.0945920 0.9371200 0.0576530 -0.3886200 0.7372000 0.8184500 -0.2552700 0.2443500 0.2443500 0.000 0.000 -0.297 -0.297 0.445 0.445 0.108 0.458 0.000 0.415 0.415 0.588 0.588 0.000 0.000 0.160 0.737 0.209 0.446 0.818 0.818 -0.255 0.244 0.000 0.000 0.000 0.000 0.324 0.324 0.233 0.233 -0.585 -0.585 0.000 0.000 -0.497 1.752 -0.293 -0.293 0.000 0.000 0.000 0.000 -0.297 -0.297 0.445 0.445 0.108 0.458 0.000 0.415 0.415 0.588 0.588 0.000 0.000 0.160 0.737 0.209 0.446 0.818 0.818 -0.255 0.244 0.000 0.000 0.000 0.000 0.324 0.324 0.233 0.233 -0.585 -0.585 0.000 0.000 -0.497 1.752 -0.293 -0.293 0.000 0.000 8.17532399 -2.02679285 5.19236778 9.66319783 12.41692055 5.89438610 10.50116563 9.09764450 9.04886637 -0.44183035 10.64142013 11.89814508 4.48099533 3.52778350 2.55816965 8.11530693 4.76761772 10.33651337 11.28352868 10.73121490 9.17532374 3.46504719 7.58422443 9.82611959 7.24699516 5.02848075 3.33074482 NA 9.87971480 7.94761473 6.00110639 8.71044726 6.77733160 10.08541788 10.11307105 5.14312399 9.16302441 -2.02679285 7.53353298 12.95088234 6.50458067 7.39526506 -0.02679285 7.30635521 8.80133652 NA 3.67363557 NA 5.22112693 2.90157169 3.52778350 11.65685256 0.55816965 8.04466241 9.64208492 10.55322292 5.26782041 8.75946946 13.33723198 8.62514846 2.61706334 4.20201801 11.06165694 1.43263877 -1.02679285 -0.44183035 2.61706334 14.633937 6.864983 9.183262 13.336992 10.236763 10.886650 13.161634 12.974344 9.116583 11.927029 12.303557 12.168265 9.239401 9.686586 2.880098 7.988615 12.236249 10.753535 12.062402 8.928850 13.141872 8.068597 7.388942 9.736827 9.858134 9.667993 6.714667 10.086291 11.256433 6.138106 3.182661 10.520818 6.244663 8.972495 11.570089 9.563787 11.203671 9.526800 8.752098 12.206370 7.912779 10.780406 9.545900 10.275268 9.458526 10.464301 9.853931 10.626717 10.478763 9.818690 6.523946 8.553308 6.861304 10.620209 8.401560 10.583302 7.017595 10.530185 10.870856 7.507016 13.396513 10.435702 9.842794 12.734959 9.589749 2.143132 -2.026793 10.933564 10.802526 9.087593 TCGA-D8-A3Z5 54 0 NA 1015 breast stage iiic t2 n3a m0 female 2011 NA no infiltrating lobular carcinoma 19 white not hispanic or latino NA NA 3 1 5 3 3 3 3 3 2 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 2.774378e-07 13.3333333333333 6.66666666666667 13.3333333333333 13.3333333333333 53.3333333333333 9.87939379 9.03004248 11.73811063 8.86841854 8.52268745 8.63919019 11.27708110 8.65752175 10.65296074 11.55123707 11.52135354 10.18551214 2.25056751 13.97671500 2.90263318 10.13363737 7.77411958 8.53331532 9.82420491 12.95254479 4.39739911 13.89322187 7.93905787 10.16158151 10.62373356 5.65265571 NA 9.01590312 7.96283876 0.02814477 7.96283876 6.64287482 0.44318227 5.79193125 9.72629106 9.40682129 9.69113020 10.46001104 9.74355536 11.38535068 9.26656989 11.88536872 14.43266378 8.21907653 10.12048194 11.08480294 10.32928037 5.80952506 4.39739911 8.37836769 11.42334233 -1.55681773 10.05007065 4.59294732 4.44320216 3.44320879 9.39083962 11.79882915 10.63734398 11.95050188 12.45905335 8.60054964 10.28122485 10.48349244 11.00568370 11.44443501 4.85259318 11.17197363 12.98163422 0.44318227 10.41510551 8.30273761 4.91893477 3.14363831 10.69675484 9.90876908 10.48246453 8.77187766 4.39739911 10.36578712 13.91246299 12.11396962 10.60842385 10.46175067 0.80694000 0.80694000 -0.00622860 -0.00622860 -0.00609040 -0.00443120 -0.02411400 -0.02411400 0.00000000 0.00000000 0.00000000 0.00277450 0.00277450 0.00110930 0.00110930 0.00110930 -0.00512270 -0.00512270 -0.00576110 -0.00152430 0.01126100 0.00583090 0.00583090 0.00583090 0.01014600 0.01014600 0.01014600 0.01251600 0.00221930 0.00221930 -0.00396940 -0.00622860 -0.00609040 -0.00609040 -0.00443120 -0.00802400 -0.02411400 -0.02411400 -0.02411400 0.40294000 0.39197000 0.00000000 -0.00041585 -0.00041585 -0.00041585 -0.00041585 0.00277450 0.00277450 0.00110930 0.00110930 0.00110930 0.00110930 -0.00512270 -0.00512270 -0.00512270 -0.00576110 -0.00152430 -0.00152430 0.00889200 -0.44340000 0.00583090 0.00583090 0.00360760 0.01014600 0.01014600 0.01251600 0.00263570 -0.38772000 -0.40014000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.415 -0.443 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.805 0.000 0.000 0.000 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.392 0.392 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.415 -0.443 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.805 0.000 0.000 0.000 -0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.392 0.392 0.000 0.000 0.000 0.000 0.000 0.000 8.13145316 NA 6.35609274 11.76583510 11.51282035 8.71414040 12.12597794 9.33721713 9.19027113 -0.55681773 11.15486974 10.88064535 4.78305323 2.02818014 3.93505423 7.93104299 3.14363831 9.78694360 11.37320083 10.82609694 8.92601069 8.53596001 7.70764557 10.71086729 6.42619597 8.41042888 NA NA 10.66025169 7.14017025 7.66961501 7.70998948 9.17112324 11.87788701 10.65021706 3.86946676 9.46348820 1.90265247 8.35009320 12.50246271 10.56764726 8.31356739 NA 5.99009715 7.79634986 2.14365463 4.72860625 -1.55681773 3.53067008 4.25055993 4.08705543 10.27371799 2.53067008 9.48623007 10.65569913 9.27451001 6.35609274 9.70353420 10.42940036 6.83121982 1.76511036 3.39739227 12.00377442 -1.55681773 NA 0.02814477 3.25055235 12.449047 3.691132 8.167717 13.976715 10.174097 10.323934 12.952545 12.672322 8.986911 10.278858 12.830412 11.812800 8.378368 7.468342 1.250537 7.434725 11.178124 11.233144 12.455391 5.700590 13.471971 8.663569 5.313569 9.593585 7.188037 10.863550 6.385717 8.318184 11.521354 5.681607 1.443182 10.315108 8.950997 6.333832 11.333847 10.558897 10.295342 7.844082 9.670819 11.578912 7.978478 11.282312 9.691130 10.626838 10.649912 11.528011 10.916147 9.564736 10.725712 8.482122 NA 9.928217 6.208937 11.423342 8.048682 10.050071 4.633030 11.492030 9.390840 7.562144 14.078127 10.002580 10.256984 12.585310 11.250558 NA -1.556818 9.883553 9.483493 10.470418 TCGA-D8-A3Z6 56 0 NA 563 breast stage iiic t3 n3a m0 female 2011 NA yes infiltrating lobular carcinoma 19 white not hispanic or latino NA NA 3 1 NA NA 3 4 1 3 1 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 2.774378e-07 16 24 4 36 20 9.600916 8.808098 11.889593 8.657031 8.640544 8.740079 10.660832 9.175697 10.886849 9.304630 10.613945 10.096741 2.197614 12.971681 1.975190 9.696307 5.849677 8.037703 9.006794 12.630142 2.638167 13.373150 6.666369 10.060406 11.033876 9.248226 NA 10.658495 9.142626 1.197614 8.266762 6.642911 -1.609552 5.423669 9.777724 9.881597 10.434981 10.155946 9.801756 10.888097 -1.609552 11.055137 15.091227 9.605996 10.810205 11.076964 10.484323 4.344438 2.712178 7.652340 12.038940 NA 9.279749 4.675647 5.019600 4.118169 9.987832 11.498933 10.497789 12.017893 12.449674 8.764198 9.935692 9.925462 11.168528 10.904713 3.975208 11.300888 11.669711 -1.609552 10.165855 8.271359 4.272889 3.944830 10.896801 9.528517 9.871035 9.101051 2.849679 9.940511 13.715164 11.368956 10.051578 10.025056 1.08630000 1.09530000 -0.00733390 -0.00733390 -0.00401620 -0.01027900 -0.01395300 -0.01697900 -0.60274000 -0.60274000 0.56650000 0.55726000 0.00083195 0.00000000 0.00000000 0.00000000 0.27033000 0.25121000 -0.00443120 0.56596000 0.00000000 -0.01023200 -0.01023200 -0.01023200 -0.00733390 -0.00733390 -0.01807800 0.00458000 0.00263570 -0.01257600 -0.00664320 -0.00733390 0.01978300 0.00083195 -0.01027900 -0.01505400 -0.01395300 -0.01697900 -0.01697900 0.56507000 -0.02274400 -0.60274000 0.33513000 0.33513000 0.33513000 0.34080000 -0.91364000 0.57273000 0.00000000 0.00000000 0.00000000 0.00000000 0.27033000 0.26137000 0.26137000 -0.00443120 0.56596000 0.56596000 0.00000000 -0.58951000 -0.01023200 -0.01023200 -0.29331000 -0.00733390 -0.01807800 0.00135410 -0.00207840 0.01251600 0.01251600 0.557 0.000 0.000 0.000 0.251 0.251 0.000 0.566 0.000 0.574 -0.590 0.000 0.000 -0.293 -0.293 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.566 0.566 -0.603 -0.036 0.335 0.335 0.108 0.108 0.557 0.000 0.000 0.000 0.251 0.251 0.000 0.566 0.000 0.574 -0.590 0.000 0.000 -0.293 -0.293 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.566 0.566 -0.603 -0.036 0.335 0.335 0.108 0.108 8.63222822 5.17160316 5.51952932 11.92150465 11.47919888 8.04188854 12.02482922 8.41465057 9.77410590 NA 11.67492455 11.52735306 2.78255534 1.97518994 3.59969865 7.98083191 3.29713271 9.88610000 11.30761710 11.18972901 9.34734698 7.94291442 8.15179642 10.34043642 7.03770398 8.72451829 -1.60955242 NA 10.92552039 5.94483503 6.64291091 8.19276131 7.01595356 11.40153693 10.21877826 2.63816654 8.82903674 NA 6.75218928 11.78430574 9.74889624 8.49090742 -0.02473668 7.13843769 8.13339656 1.71215553 4.94483503 NA 2.47770323 5.47770647 2.29713271 10.43361413 NA 7.92162675 10.49811591 9.55011629 5.01959962 9.90002011 12.00138515 6.96767355 2.47770323 2.84967907 11.21976956 4.78256059 NA 0.39022744 2.09068409 12.898705 4.367525 8.536177 12.971681 9.958201 10.664623 12.630142 12.243750 9.150641 10.402870 13.270020 9.043986 7.652340 8.263689 2.090684 7.338612 10.748896 11.4325884 13.1609089 7.9255206 13.5073581 8.3195032 5.1451312 9.2682959 7.7008579 10.8124990 6.7825619 8.7543798 10.6139451 6.9638925 4.5601708 11.0604587 6.8248735 6.3078565 10.8414562 10.5007284 10.9820011 8.1198656 9.3831833 10.8305951 5.1451312 11.4915478 10.4349806 10.9759118 10.4512786 10.9551090 10.6988685 9.5726394 10.8943192 8.6744907 1.7121555 9.9181814 7.8586450 12.0389397 5.4987710 9.2797489 7.1484684 11.2316128 9.9878320 7.0591303 12.7502691 10.1629719 10.3455317 12.9725047 10.6529271 -0.6097726 NA 9.7472471 10.3700275 9.6003075 TCGA-D8-A4Z1 68 0 NA 659 breast stage ia t1c n0 m0 female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 NA NA 3 3 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 2.080784e-07 15.3846153846154 53.8461538461538 0 30.7692307692308 0 10.313920 9.526640 11.823452 9.215215 8.106573 9.212721 11.340149 9.714634 11.231013 13.096802 11.063281 10.560377 3.359718 13.337504 3.497229 10.490551 7.355207 8.911239 11.337003 12.334138 4.991993 13.302018 6.968533 9.809829 11.054604 4.895778 NA 11.260892 8.549548 2.207705 8.944686 7.484878 1.037804 5.082187 10.103884 9.746879 9.549548 11.823656 10.205213 11.424466 12.662933 11.333277 15.076050 8.436453 10.395347 11.291347 10.975905 6.015076 4.037795 8.618996 12.440940 NA 10.683003 6.227620 6.247248 4.125254 10.142394 11.874240 10.251507 12.427830 12.868806 7.883285 10.630719 10.766664 11.059469 11.465632 4.991993 11.331267 12.088494 NA 10.399739 8.715515 4.420806 4.622761 10.653885 10.208972 10.372627 9.282159 5.247248 9.266614 13.697958 12.601111 10.251507 9.842733 0.00708260 0.00708260 -0.00401620 -0.00401620 -0.00263220 0.01363200 -0.00235530 -0.00235530 -0.02831800 -0.02831800 0.31784000 0.00055459 0.00055459 0.00263570 0.00263570 0.00263570 0.00138680 0.00138680 -0.00332430 0.00097064 -0.00470790 0.00527490 0.00527490 0.00527490 0.00485790 0.00485790 0.00485790 0.00402430 0.00708260 0.00708260 -0.00207840 -0.00401620 -0.00263220 -0.00595220 0.01007800 0.01265500 0.00485790 -0.00235530 -0.00235530 -0.00290910 -0.00290910 -0.02831800 0.00000000 0.00000000 0.00000000 0.00000000 0.00055459 0.00055459 0.00263570 0.00263570 0.00263570 0.00263570 0.00138680 0.00138680 0.00138680 -0.00332430 0.00097064 0.00097064 -0.00470790 -0.10368000 0.00527490 0.00527490 0.00055459 0.00485790 0.00485790 0.00402430 -0.00526100 0.00666530 0.00666530 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 -0.104 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.71727543 7.39094191 5.95665842 11.47684694 11.22452854 7.56174923 11.81114057 9.42278404 9.21996614 5.14632123 11.57985982 10.83416755 4.59238527 2.03780390 5.06016414 8.14631970 3.49722913 10.19387829 11.37206853 10.21770439 8.91890914 4.56135669 8.17478640 10.56820164 7.16191690 6.73128237 -0.96212583 -0.96212583 11.20834631 7.58854225 8.02363738 7.84515004 8.59046429 11.43665382 10.00213611 6.01507601 8.95814812 0.03773363 8.79101210 13.04482253 9.96112277 7.84515004 NA 3.99198887 7.95665842 4.84514878 4.59238527 1.62274298 5.08218737 6.00473283 4.43011128 10.33700333 NA 9.90507406 10.62228807 9.35181205 5.96853317 9.95889240 11.62861618 8.21521458 2.20770548 2.49722913 10.90893042 NA NA -0.96212583 1.35974605 12.3728143 4.1252543 8.8547790 13.3375041 10.3647865 10.0746557 12.3341379 12.2702162 9.0559955 10.5276433 12.8057728 11.2426720 8.6189959 7.4972267 -0.9621258 7.9265385 10.8455527 11.397819 12.138293 6.187542 13.455644 9.023637 7.867518 9.002136 7.541621 10.536440 7.656181 8.135827 11.063281 6.412834 1.037804 10.691536 7.848367 6.332692 11.941112 10.307506 10.190714 8.297539 9.007901 11.209285 6.799346 12.056609 9.549548 10.363101 10.042016 11.612152 10.959636 9.803496 10.671699 8.760603 1.037804 9.882760 8.201797 12.440940 6.968533 10.683003 5.207721 11.414735 10.142394 7.114611 14.009249 9.883285 10.436539 12.732697 10.815051 2.037804 NA 10.366470 10.048323 10.144358 TCGA-D8-A73U 88 0 NA 492 breast stage iia t2 n0 m0 female 2012 NA no infiltrating lobular carcinoma NA white not hispanic or latino NA NA 3 3 1 2 4 4 4 3 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1662460 9.4767245 11.3155181 9.7341448 8.3668397 10.0374227 9.7216826 10.0705592 10.3588145 8.8004314 11.4021514 10.4233413 1.2878860 11.8874295 2.4253787 9.8098815 6.4335654 8.8981751 9.1827062 12.5019647 3.3582837 12.6377226 6.8114505 9.6363422 9.4578134 5.2513631 NA 13.1043834 8.8803454 3.1358796 9.0103547 7.5769854 NA 6.4973425 10.1067902 10.5443331 9.6577040 10.9680722 10.0387629 11.4462457 6.0212421 10.3948440 15.1986062 8.7089604 9.2946352 10.7320751 10.1346326 5.2138877 2.2878860 8.5695868 11.9853774 -1.0341603 10.7312465 6.4578142 8.7440376 7.2043648 10.1662460 11.6960059 10.3588145 12.2762892 12.9798937 8.4578134 10.4527955 10.3114821 11.3013508 11.1016697 5.3058101 11.5795197 10.1087057 -0.0340126 10.6232789 8.5031790 4.6129894 7.1258319 10.2420848 10.2156665 10.0738313 9.5612179 8.2067516 9.7489586 13.0873320 12.1639449 9.9952476 9.4914812 0.39579000 0.39579000 0.00694350 0.00180300 -0.20796000 0.00652620 0.00555290 0.00555290 -0.10959000 -0.10959000 -0.10959000 -0.07841100 0.00305220 -0.00373950 -0.00373950 -0.00373950 0.00000000 0.00000000 0.00711600 0.00277450 -0.20025000 -0.19725000 -0.19725000 -0.08173800 0.00638710 0.00638710 0.00638710 0.44511000 -0.19950000 -0.19950000 -0.00027724 0.00694350 -0.20796000 -0.20796000 0.00652620 0.00652620 0.00555290 0.00555290 0.00555290 0.01419000 0.01419000 -0.10959000 0.00499690 0.00499690 0.00499690 0.00499690 0.00305220 0.00305220 -0.00373950 -0.00373950 -0.00498440 -0.00498440 0.00000000 0.00000000 0.00000000 0.00180300 0.00277450 0.00277450 -0.20025000 -0.19462000 -0.19725000 -0.08173800 -0.20858000 0.00638710 0.00638710 0.40627000 0.00332990 -0.00705760 -0.00705760 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.200 -0.202 -0.202 -0.197 -0.197 -0.209 -0.209 0.000 0.000 -0.199 0.196 0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.208 -0.208 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.200 -0.202 -0.202 -0.197 -0.197 -0.209 -0.209 0.000 0.000 -0.199 0.196 0.400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.208 -0.208 0.000 0.000 0.000 0.000 0.000 0.000 -0.110 -0.110 0.000 0.000 0.000 0.000 7.4047524 1.5509007 4.6663987 11.0096713 11.0656369 6.9204481 11.7200128 9.4639618 9.9281118 3.4895172 12.7353850 11.9269289 4.3582767 -1.0341603 4.7988489 7.5167070 4.9659597 12.5591181 11.3695051 10.7032077 8.7324893 7.3795880 7.9855511 10.8829594 9.7717042 5.0320479 5.5953157 NA 10.9733381 6.4578142 7.6241718 7.7988502 6.4973425 11.2800394 10.4702828 6.2420842 8.9403750 -1.0341603 8.8547035 12.4740027 9.8675816 7.9771877 NA 2.4253787 8.3985022 1.2878860 4.2138916 -0.0340126 8.4151092 4.5211638 5.8363256 10.3328290 NA 7.6489550 10.8554643 9.5565474 6.3146893 10.8208288 14.8850332 11.0560729 7.0158086 5.8114505 10.1061511 1.9659505 NA 1.9659505 0.9659874 11.848752 5.135884 8.118246 11.887429 10.768881 10.438651 12.501965 10.749777 9.123307 10.802011 13.512493 8.558417 8.569587 9.522466 -1.034160 7.150836 11.003164 11.291828 12.235964 4.358277 13.001358 8.662928 9.343171 8.301351 7.209135 10.307051 9.728342 8.255979 11.402151 7.558418 1.773321 10.643680 4.666399 7.510886 10.160102 11.461066 10.744859 7.332283 8.730832 11.442200 10.381702 11.975254 9.657704 10.915422 9.593494 11.094599 10.965608 9.802800 10.718759 8.963140 -1.034160 10.527759 10.482109 11.985377 9.847839 10.731246 8.018528 11.596667 10.166246 7.375351 13.461878 9.725016 10.356129 12.826756 10.972286 3.823943 1.287886 9.692179 9.986246 10.012402 TCGA-D8-A73W 79 1 385 NA breast stage iiia t3 n1a mx female 2013 NA yes mucinous carcinoma 1 white not hispanic or latino NA NA 3 2 1 2 4 1 3 4 6 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.0044647 9.9285159 11.0027022 10.1743245 8.5345729 9.9663873 9.9675926 9.4586020 11.2643641 12.6565414 11.3765937 10.1617427 1.9116916 12.5686290 6.7247758 10.8646106 5.8398135 8.4317805 11.1779736 12.8506337 -0.2582526 13.6077575 8.4866166 9.0679312 9.8858034 9.7620681 1.0637100 9.4525891 8.3491131 3.8292407 8.2276121 8.1426621 NA 5.4697037 9.8972333 10.4849340 9.1233255 10.9570123 9.1690955 11.5049950 11.8328874 9.5442989 15.2052272 8.2401931 9.5305010 10.7467053 11.3061703 4.1680483 NA 9.1146476 9.7724497 0.7417474 11.0668069 5.7075662 6.3564925 4.6725215 10.2584676 11.1958248 9.9681947 11.4295957 12.6850300 9.2555102 10.6868606 10.8998052 11.0103246 10.6602732 5.1847246 11.1756288 11.6038387 0.3267674 10.6040325 8.5475266 3.8743642 6.2175157 9.7916311 9.9627655 10.6140727 9.8568262 3.3267387 8.7571976 12.1658177 11.8299083 9.6358425 8.4300331 1.25850000 1.26480000 0.00180300 0.00180300 -0.00083160 0.00083195 -0.00083160 -0.70136000 -0.00332430 -0.00332430 -0.00332430 0.01098200 0.01098200 0.00000000 0.00000000 0.00000000 -0.00609830 -0.00609830 -0.00761010 0.00069327 0.01349200 -0.67361000 0.02188400 0.02188400 0.02328600 0.02328600 0.02328600 0.01349200 -0.66909000 -0.68122000 -0.00857660 0.00180300 -0.00083160 -0.00083160 0.00083195 -0.00326540 -0.70208000 -0.70136000 -0.70397000 0.01028500 0.00763920 -0.00332430 0.01098200 0.01098200 0.01098200 0.01098200 0.01098200 0.01098200 0.00000000 0.00000000 0.00000000 0.00000000 -0.00609830 -0.00609830 0.01782400 -0.00761010 0.00069327 0.00069327 0.01349200 -0.67683000 -0.67361000 0.02188400 0.00263570 0.02328600 0.02328600 0.01349200 0.00597000 0.03750000 0.03750000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.677 -0.674 0.000 0.000 0.000 0.000 0.000 -0.363 1.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.702 -0.702 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.677 -0.674 0.000 0.000 0.000 0.000 0.000 -0.363 1.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.702 -0.702 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6710410 NA 4.7190629 10.8962843 10.8232660 7.3768113 12.3035479 9.4003511 9.0581433 0.3267674 12.8966798 11.9723885 3.2012104 NA 3.7861781 6.8345393 3.4422269 11.8179301 11.5599653 11.4709785 8.7333045 -1.2580801 7.7641504 10.0167431 8.3784071 5.8078727 5.2336350 NA 10.8457260 4.1680483 5.3856381 8.4966701 4.6486725 10.9860602 10.4966702 2.9897022 8.7347208 NA 6.9609507 11.6669661 9.9789925 9.3220413 -1.2580801 0.3267674 8.4594591 1.7417905 6.2963711 -1.2580801 4.4142100 4.4990741 2.4422269 10.2386364 NA 6.3999948 10.9579221 9.9819776 4.5491393 9.8299084 12.9679690 8.7118886 2.7417905 3.1341059 13.3908703 5.0816336 NA 3.6486725 0.3267674 13.1355344 4.3564889 8.2175162 12.5686290 10.5730899 10.3491129 12.8506337 12.6853048 9.0700874 10.9229349 13.6123881 9.8626685 9.1146476 8.0905110 -0.2582526 6.5997641 11.7467053 10.988523 12.203006 6.072700 13.634514 8.339835 4.931607 8.513272 7.829245 9.191891 7.201214 7.476492 11.376594 7.571505 2.741791 11.321570 8.519860 6.709932 11.977348 10.495835 11.345177 8.197110 8.753010 11.665482 5.265343 13.032357 9.123326 10.753010 10.239135 10.415533 10.449573 9.951236 10.652425 9.382028 -1.258080 9.745090 6.555563 9.772450 3.829241 11.066807 6.916708 10.766922 10.258468 7.568331 12.469597 9.397313 10.622514 13.549792 9.951236 1.063710 NA 10.108105 10.742135 10.372505 TCGA-D8-A73X 53 0 NA 767 breast stage iia t2 n0 m0 female 2013 NA yes other, specify NA white not hispanic or latino NA NA 2 5 2 2 4 4 6 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1809066 9.3526283 11.8042741 8.7086263 8.6988866 9.2687036 10.7404277 9.5497312 9.6680191 12.8716593 11.2421249 10.2504834 2.8150220 12.7971595 3.0780633 9.8880919 7.3726770 8.3212300 10.5493924 13.1082633 4.4472882 13.7991907 6.6630186 10.1268198 10.8945063 3.9193592 -1.5067626 12.1473300 8.2227143 2.6630258 8.2176073 7.8329432 -1.5067626 4.4930965 9.6939920 9.8178365 9.8484445 11.8579121 10.0210591 10.8851425 -0.5069676 12.3838327 14.1909841 9.2875579 10.2670568 11.0648461 10.8800337 5.1655181 3.7025467 8.7219123 10.7080197 -1.5067626 10.5116414 4.1369460 6.0244748 5.7025467 10.1499652 12.0959083 11.0142031 12.1461624 12.9728737 9.0038577 10.8599620 10.8022856 11.3044681 10.7983002 4.8150220 11.8651423 11.9540612 -0.5069676 10.2765010 8.6705129 4.4957975 3.9193592 10.7495970 10.4577953 10.1274508 9.3765005 3.6223799 9.1760881 13.9333138 12.7614892 9.9617175 10.1383015 1.35660000 1.36620000 0.21146000 0.21146000 -0.01931400 0.21868000 -0.02041200 -0.02041200 -0.00636680 -0.00636680 -0.02166900 0.00263570 0.00216170 0.00000000 0.00000000 0.00000000 -0.01147300 -0.01147300 -0.01505400 0.00045599 -0.44674000 0.02370600 0.02370600 0.02370600 0.02412700 0.02412700 0.02412700 0.32286000 0.01852300 -0.01417000 -0.00622860 0.21146000 -0.01931400 -0.01931400 0.21868000 0.21868000 -0.02041200 -0.02041200 -0.02041200 -0.01464100 -0.01593200 -0.00636680 0.05138700 0.05138700 0.02146300 0.02146300 0.00216170 0.01237600 0.00000000 0.00000000 0.00000000 0.00000000 -0.01147300 -0.01147300 -0.01147300 -0.01505400 0.00045599 0.00045599 -0.44674000 -0.75426000 0.02370600 0.02370600 0.00180300 0.02412700 0.02412700 0.31001000 -0.00401620 -0.42495000 -0.42495000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.447 0.775 0.021 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.338 0.310 0.310 0.000 -0.425 0.000 0.000 0.211 0.211 0.000 0.000 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.447 0.775 0.021 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.338 0.310 0.310 0.000 -0.425 0.000 0.000 0.211 0.211 0.000 0.000 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.8217682 NA 4.3004459 11.4328563 11.2440097 7.6348176 12.2218643 8.3367163 9.0047966 -1.5067626 11.8970375 11.3812792 2.9525199 3.2479883 4.5374887 8.5043209 3.9525293 10.1169750 11.2182466 10.9846961 9.3370146 4.7598802 8.4119567 10.3673064 5.8854109 2.8150220 -1.5067626 NA 10.8437564 7.2379269 6.8811103 7.5937556 9.4746607 11.9778899 10.7968742 3.0166568 9.0254494 NA 8.5685726 12.0678052 10.0605742 7.2546451 -1.5067626 0.4931349 8.7528365 NA 3.8150220 -0.5069676 4.1655181 4.9201980 3.7784925 10.0303118 NA 8.0087933 10.5825440 9.7152846 3.6630144 9.2210138 11.4565314 7.9929395 3.5805556 3.6223799 11.2742482 -1.5067626 NA -1.5067626 0.8150015 13.05977127 4.60161927 8.72070940 12.79715951 10.46068001 11.02471860 13.10826326 12.06116831 9.09339670 10.33347796 13.02885482 9.32677416 8.72191227 9.28507018 0.07806326 7.95866001 10.97337873 10.9059279 11.9244605 6.9969197 13.4527296 8.8093749 4.9525246 9.1978617 8.0322524 10.6076947 6.2073385 5.7692190 11.2421249 7.4789354 5.1369501 10.8343343 9.4545432 6.4417524 11.6855404 10.2450559 10.3753543 7.6197981 8.8484445 11.4723400 6.0087939 11.8146397 9.8484445 10.5960533 10.0846157 11.3338714 9.5832058 9.9693334 10.4870933 8.5126840 NA 9.6754629 6.6428402 10.7080197 5.7025467 10.5116414 7.7338851 10.6900029 10.1499652 6.9024849 14.0884966 10.0808709 10.4671494 12.7194304 10.9154210 0.4931349 -1.5067626 10.1364988 9.8025698 10.3757365 TCGA-E2-A105 79 0 NA 1308 breast stage iia t2 n0 (i-) m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 2 NA NA 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.179111e-06 4.508365e-07 22.9166666666667 16.6666666666667 4.16666666666667 31.25 25 10.1557102 9.6473201 11.8860532 8.7720819 9.8034687 7.9302069 10.5654683 10.8632729 8.4028479 14.0835006 10.7962060 11.1662114 1.1658155 13.2218175 3.7507673 8.8106953 6.2713435 8.7889065 11.0231234 13.4924390 0.3585088 13.9479588 2.2653469 9.4754866 11.8384868 3.6063830 -1.6416037 10.6789725 11.7964661 2.1658155 6.1266384 6.7378328 -1.6416037 2.0589052 9.6977472 9.9149600 9.0229012 10.3770019 10.0162190 10.9516116 12.1880776 11.9264100 13.6636964 8.8162042 10.6222953 9.4191499 11.7281876 4.5872750 6.6667935 8.7868143 10.1233255 -1.6416037 11.1710324 3.8503094 4.6063830 4.1913416 10.3231558 12.6274345 10.2257327 11.9401253 12.9990379 8.2133225 11.0501975 10.8803684 11.0786982 10.2483382 4.0588966 12.3315235 11.1901571 -1.6416037 10.2490983 8.9283096 4.9434150 3.7160032 10.5608839 10.6645156 11.1379681 11.6693507 0.9434338 4.9130426 11.3867054 10.7467404 10.4663249 9.7253226 -0.00556650 -0.00903200 -0.00832950 -0.00832950 0.00066413 0.00621880 0.00635790 0.00094150 3.65690000 0.00330070 2.98180000 -0.73707000 0.00120650 0.00816660 3.12720000 -0.72023000 0.00427290 -0.00639580 0.00296450 -0.00058577 0.00038679 -0.72846000 0.65678000 1.27180000 -0.01246700 -0.01246700 -0.01246700 1.43660000 -0.01108900 -0.00556650 -0.00293820 -0.00832950 0.00066413 0.00066413 0.00621880 0.00621880 0.00635790 0.00094150 0.00094150 -0.73733000 -0.02975000 -0.73874000 0.00872350 0.00872350 0.00000000 0.00000000 0.00120650 0.00552370 0.00816660 -0.71062000 -0.72562000 -0.72562000 0.00427290 0.00038679 0.00038679 0.00296450 -0.00058577 -0.00058577 0.00038679 0.00955910 -0.72846000 0.65678000 0.01234700 -0.01246700 -0.01246700 0.01458000 -0.37157000 -0.74787000 -0.42180000 0.000 0.000 -0.713 -0.713 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.728 0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.724 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.725 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.713 -0.713 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.728 0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.724 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.725 0.000 0.000 0.000 0.000 0.000 7.93020687 5.56790741 4.33573334 11.26082911 12.71256558 7.51527012 10.41475298 8.89798125 8.95699957 NA 10.94247690 12.56325816 10.46958962 2.05890523 2.26534687 8.80760254 5.77630669 8.75933330 10.44259802 10.53150642 9.76146596 -0.05664124 9.15854506 9.60341234 5.17863099 4.78471859 2.16581549 NA 9.51958593 7.24415069 6.04495360 6.74647133 6.78890622 10.79477771 10.71408037 2.26534687 8.79099581 -1.64160374 6.38082121 11.90799800 10.01844988 6.76784545 -1.64160374 3.88201693 8.61111925 NA 4.50820044 2.52837128 3.71600316 6.06131826 0.35850879 10.18976119 0.35850879 8.26834690 10.98256398 9.87513898 3.88201693 8.88886043 12.29895112 7.16902604 3.00230647 4.19134156 12.32450874 6.00231097 NA 2.52837128 1.52837128 15.427644 5.874153 9.424543 13.221818 10.172636 10.295828 13.492439 13.165155 8.278807 10.589375 12.139199 11.518956 8.786814 8.817886 3.265347 8.658807 13.735325 11.1836115 12.6287493 6.8976132 12.4290764 8.8888604 3.7507673 10.0859491 9.7021949 11.0410382 4.0023065 10.5596590 10.7962060 6.6392249 -1.6416037 10.1913440 6.3242382 8.9323190 8.8976129 10.3385936 10.5700381 10.0032116 9.9382412 9.9273601 3.7160032 11.3629378 9.0229012 10.7010843 8.1609701 11.0385937 9.4014814 10.7799929 10.3651307 8.4339330 1.1658155 8.0854045 5.5776222 10.1233255 3.4028449 11.1710324 5.3584525 11.5745935 10.3231558 7.1301741 14.0852575 10.6750184 9.3973730 12.4353531 11.5582796 1.1658155 0.3585088 10.7250494 9.8780902 10.0175580 TCGA-E2-A106 34 0 NA 2541 breast stage ib t1c n1mi m0 female 2006 NA no infiltrating ductal carcinoma 1 asian not hispanic or latino 1 1 NA 1 NA NA 1 1 3 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.3401500 9.7648295 11.2565492 9.0085149 9.0807389 9.5348091 10.6059362 9.0913150 9.6439867 14.8476566 9.6169581 10.9728212 0.5348585 13.1346057 3.7442580 9.0075000 3.1786668 8.2160474 11.5081477 13.6485920 -0.4651415 14.0388832 1.5348087 9.2772618 11.2462610 9.7594139 NA 6.5516175 8.6870939 1.5348087 7.9505506 6.1858606 NA 3.7047392 9.7998380 9.1150676 10.8271308 8.9993549 9.4318983 10.7378512 1.9942539 10.3429689 14.1098460 8.3839954 11.3728312 10.7919023 11.3545890 4.1197712 8.0564096 8.8248280 11.2302549 -0.4651415 11.0186249 3.7047392 2.6222744 3.1786668 9.9206716 11.8157248 10.5456869 12.6291343 12.7625754 8.7696266 11.0363976 10.6232993 11.5470845 10.6791487 4.2896943 11.9026334 9.4484465 NA 10.0710563 9.5982042 3.0602550 2.9942358 10.1079830 9.7874746 10.6756389 10.2045799 4.3421636 9.5640963 10.9114772 10.2921991 10.3271928 9.6209454 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1696201 NA 4.7442634 10.3767665 12.0956196 6.3796712 11.6589304 7.8338799 10.1600157 -1.4651415 11.7693272 12.1652526 4.2072369 -0.4651415 2.1197878 7.1965874 4.2352522 10.7977848 11.8014493 10.9201323 8.9756783 7.8317253 7.6870943 10.4929993 6.5063528 4.6222744 5.9271261 NA 10.2400094 6.5005933 8.1272660 5.9694383 5.4890066 9.6678551 10.7907228 2.1197878 8.7957286 NA 6.2213087 11.8171736 8.2593229 7.7660306 -0.4651415 5.1347220 8.8015955 4.4417026 4.8385888 NA 1.8567467 3.3524337 0.5348585 10.3842142 -0.4651415 8.0759059 11.4521812 10.1795667 4.7636293 7.3357092 11.4403842 5.9356884 2.2352369 2.9271190 11.1098756 2.9271190 -1.4651415 4.5120878 1.3421565 12.5786908 5.4174509 8.6433335 13.1346057 10.2045799 10.1037153 13.6485920 14.2052717 8.1550292 10.4067144 13.0200724 10.9873078 8.8248280 9.8328717 -0.4651415 7.6354715 13.1619440 10.625252 12.164735 5.994240 14.114713 8.491911 3.119771 8.198367 8.391235 10.575027 4.367700 11.180017 9.616958 6.207235 NA 9.705360 8.863484 6.189587 10.476224 9.647249 10.882984 8.097051 9.821367 11.562542 3.178667 9.792173 10.827131 10.213409 9.930879 10.799252 9.016609 11.080256 10.230907 8.990136 NA 9.133439 4.944198 11.230255 5.073966 11.018625 5.489007 10.142139 9.920672 7.405390 12.543588 10.565476 9.555095 12.381279 9.393567 NA 4.782739 10.700344 9.720923 9.495535 TCGA-E2-A107 54 0 NA 1047 breast stage iiia t3 n2a m0 female 2008 NA yes infiltrating lobular carcinoma 4 white not hispanic or latino 1 2 1 1 2 2 4 2 6 3 NA NA 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.427581e-07 24 32 0 20 24 8.75068622 9.17042159 11.60962141 7.91876487 8.69653639 9.25793323 10.72076010 9.08342428 10.44643397 9.83247154 11.75358975 10.38783931 3.04692754 13.62861123 1.98801203 8.84289589 8.47184304 7.84600807 10.18360462 12.64214123 4.07548985 13.50085011 6.68383538 10.49281327 10.63608532 5.13098439 -0.59684137 8.69634095 9.87321523 -0.01202434 6.52200552 5.67919012 NA 3.35725640 9.82091736 10.49714259 10.08210499 10.82355147 9.08868967 11.07106342 -0.01202434 10.82801840 14.15502727 7.85553256 10.19178322 11.14579532 10.73426176 4.91085736 8.43786399 7.47720617 11.85556351 -1.59684137 10.85607820 3.89491475 3.82933204 4.23595677 9.71197269 11.52022093 11.13162318 10.48421538 12.24246550 9.28799858 10.39918520 10.10484783 10.89941931 10.48853730 3.57298665 11.15941267 10.10393806 -1.59684137 10.14411037 8.78784870 2.76062548 3.76061484 11.34521278 8.75400391 10.09218920 9.23674564 2.10349764 9.94995930 12.72245473 11.23536154 10.10653585 9.72330138 1.0990e+00 1.1336e+00 -7.4518e-05 -1.1861e-02 -7.7482e-03 2.8517e-01 -3.1237e-01 -3.2205e-01 3.2060e-01 3.2060e-01 3.0761e-01 2.9963e-01 2.9963e-01 0.0000e+00 1.2246e+00 -6.0844e-01 5.6418e-01 5.6418e-01 -3.0933e-01 4.7190e-03 1.3492e-02 2.9787e-01 2.9787e-01 2.9787e-01 -1.7116e-02 -1.7116e-02 -1.7116e-02 1.8582e-02 -2.8453e-01 -2.9154e-01 -8.8904e-02 -7.4518e-05 -7.7482e-03 -9.5426e-03 2.8517e-01 2.8517e-01 -3.1237e-01 -3.1237e-01 -3.1096e-01 2.7931e-01 2.7931e-01 3.2060e-01 3.6903e-03 3.6903e-03 6.7423e-03 6.7423e-03 2.9963e-01 2.9963e-01 0.0000e+00 -3.8061e-02 -6.1758e-01 -6.1758e-01 5.6418e-01 5.6418e-01 5.7952e-01 -3.0510e-01 -8.8526e-03 1.1679e-02 1.3492e-02 -6.0941e-01 2.9787e-01 2.9787e-01 -2.9829e-01 -1.7116e-02 -1.7116e-02 2.2585e-02 -6.0322e-01 1.0703e-02 -6.1230e-01 0.300 0.300 0.000 0.000 0.564 0.564 -0.305 0.000 0.000 0.284 -0.609 0.298 0.298 -0.292 -0.292 0.000 0.000 0.814 1.099 0.000 0.000 -0.603 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.285 0.285 -0.312 -0.312 0.279 0.279 0.308 0.308 0.000 0.000 0.000 0.000 0.300 0.300 0.000 0.000 0.564 0.564 -0.305 0.000 0.000 0.284 -0.609 0.298 0.298 -0.292 -0.292 0.000 0.000 0.814 1.099 0.000 0.000 -0.603 -0.593 0.000 0.000 0.000 0.000 0.000 0.000 0.285 0.285 -0.312 -0.312 0.279 0.279 0.308 0.308 0.000 0.000 0.000 0.000 8.56293613 -1.59684137 7.08956489 11.33176830 12.25871203 7.51177242 11.78135971 8.66787084 9.78345011 0.72499944 10.55788295 10.63548578 2.86249107 2.49051879 1.98801203 8.23437198 3.35725640 9.23832568 11.57877034 11.36848840 9.65691229 2.40307680 7.62465218 10.94754636 5.61251764 5.01777496 NA -1.59684137 10.53813276 7.14789888 5.52200552 8.18933435 8.22324394 10.29780311 10.61829446 1.40304953 9.22563572 NA 6.77810473 11.35726118 7.47452690 7.98614752 -1.59684137 -0.01202434 8.79645532 3.30996195 3.86250098 NA 3.82933204 6.57313969 2.57298665 10.93931210 0.98804840 7.93834049 9.97623860 10.08518163 5.06127505 9.90788391 11.01846463 7.27958180 1.40304953 2.86249107 11.40552831 0.98804840 NA 0.98804840 0.40304953 14.438167 6.345579 8.619811 13.628611 9.454274 11.594587 12.642141 10.284561 7.949959 10.394587 12.941375 9.622838 7.477206 8.647429 2.988030 7.357261 12.285899 11.42508585 13.02900196 8.13946694 13.41542620 8.50766344 5.01777496 10.15878702 9.85941924 11.07367686 6.12416475 8.01961352 11.75358975 6.66045235 2.30996195 10.24933879 4.91085736 8.54296142 8.88587296 10.71225701 10.68238526 8.80714204 9.65868367 9.83508466 3.95765463 10.73496706 10.08210499 10.86658920 10.47150726 10.76253992 10.20153671 7.67219124 10.79699157 7.36884952 -0.01202434 8.90651304 7.36306680 11.85556351 3.04692754 10.85607820 3.92662572 9.98755764 9.71197269 6.68846713 12.77232140 10.00947007 9.67336014 12.71303852 10.92907499 1.57298665 1.40304953 9.72442927 9.40728540 9.34411256 TCGA-E2-A108 64 0 NA 837 breast stage iiia t2 n2a m0 female 2009 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino 2 2 3 3 4 3 6 4 4 8 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.31783e-06 4.508365e-07 5.88235294117647 62.7450980392157 0 11.7647058823529 19.6078431372549 10.2837351 9.6970195 11.4014440 9.5787831 8.2213329 9.4517677 9.5623699 10.0768606 10.6006486 12.2150467 10.3800634 10.5059845 1.5982223 11.4486455 3.7450759 10.7617054 5.0576669 8.8062954 8.8756888 11.2676266 -1.2092280 12.0417710 6.4419316 9.4469925 10.4633058 7.9482276 3.9608082 13.3181674 10.4593223 4.3758457 8.5933967 8.1173101 -1.2092280 5.7097428 9.6819046 10.0687490 9.4999642 10.4450689 9.3154222 11.0852140 1.9608082 9.4703605 15.1370305 7.6434096 9.2462076 11.0866494 10.7461671 4.4347350 2.5982461 9.3889330 11.8132483 -0.2090612 10.9288322 6.7566644 8.0576669 6.2584869 10.3046080 11.4663965 10.2092602 12.0813313 12.4061652 7.7936956 10.7584670 10.3144424 10.9742057 11.1705296 5.0946626 12.0526815 10.2508243 0.7908554 10.7720909 9.5272823 3.0327180 6.8187867 10.5373948 9.9707895 9.8974434 10.3926512 5.4202365 8.9456984 13.4815878 13.0859319 9.9701676 9.4913202 0.0563070 0.1536700 0.0282000 0.0778620 -0.0675920 -0.0422450 -0.0862530 -0.0862530 -0.1283200 -0.1283200 0.6522200 0.1849500 -0.0839970 0.0200630 0.0200630 0.0200630 -0.0165420 -0.0165420 -0.0718730 -0.1165200 0.0119580 -0.0704020 -0.0704020 -0.0704020 -0.0077482 -0.0077482 -0.0077482 0.0873900 -0.0159760 0.0563070 0.0068044 0.0282000 -0.0675920 -0.0675920 -0.0422450 -0.0422450 -0.0862530 -0.0862530 -0.0862530 0.1586100 -0.0697340 -0.1221300 -0.0068326 -0.0068326 -0.0068326 0.1203500 -0.0839970 -0.1199100 0.0200630 0.0200630 0.0200630 0.0200630 -0.0165420 0.0640820 0.0640820 0.0246890 -0.1165200 -0.1165200 0.0119580 0.0000000 -0.0704020 -0.0704020 -0.0780110 -0.0077482 -0.0077482 0.0873900 -0.0208240 -0.0241140 0.0255310 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.504 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.122 0.504 0.000 0.000 0.000 0.000 7.8676957 NA 7.1702586 9.9776138 10.8948239 6.4185610 10.6542924 11.1581723 8.9958672 6.7333950 12.9899393 12.0614210 3.1128002 3.6488566 4.3454673 8.0946610 4.9807063 12.2970640 11.4749716 10.0918049 9.0160879 4.0003336 7.5457676 9.9776138 8.8146347 9.7609863 1.1128336 NA 11.0892295 6.8243033 7.2625553 8.2986753 8.4455165 10.2197325 10.1735045 6.4913208 8.9545302 -0.2090612 8.5998448 12.6802893 7.9954517 8.4597656 -0.2090612 5.8352748 7.9098217 NA 3.1832006 0.3758457 8.6457488 4.0026755 5.0946626 10.5361346 -1.2092280 10.0394011 10.0704910 9.8736948 7.7275182 10.9887115 13.9540190 10.7859409 7.6426294 5.8783428 10.0441370 0.7908554 NA 1.3758457 2.8783526 11.770663 5.697771 8.648862 11.448645 10.261031 10.460651 11.267627 11.251336 9.213996 10.606664 13.408520 11.347626 9.388933 9.241061 -1.209228 7.572240 11.035542 11.342348 11.489151 5.867696 13.323357 8.856970 8.831170 8.807689 7.793696 10.287040 8.637938 8.286736 10.380063 7.703770 4.813248 10.536135 5.038809 7.549936 11.731561 11.300161 10.174585 8.208733 7.840729 11.062927 8.634802 11.618225 9.499964 10.637938 9.859659 10.839367 10.991166 10.514115 10.906249 9.164833 3.648857 9.414149 8.123163 11.813248 8.577150 10.928832 7.727518 11.076283 10.304608 7.170259 13.844934 10.117310 10.819132 12.742074 10.231231 6.477381 1.112834 10.246721 9.729725 9.705266 TCGA-E2-A109 64 0 NA 1417 breast stage iia t2 n0 (i-) m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 1 2 2 2 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.560588e-06 4.161568e-07 16.9491525423729 13.5593220338983 10.1694915254237 38.9830508474576 20.3389830508475 9.3552749 9.7425772 11.9905593 9.0353800 10.0149159 9.4267296 10.6735356 9.4972726 9.0688548 15.3914549 11.1178540 10.6786943 0.3006509 13.4069880 3.0555601 8.3313375 5.0688556 8.3828194 8.8818711 13.5853139 -0.1143475 13.4709477 1.6226024 9.4057539 11.8381316 7.5462231 2.0011177 8.6876108 11.4971189 0.6225556 9.0311407 6.0688556 -1.6994662 5.0820298 9.8422512 9.7379024 11.1880815 9.2929007 9.4712216 11.1414484 -0.1143475 10.0157745 14.6916287 8.1637261 10.8598085 12.0003514 10.8437023 5.3230385 7.9889210 8.8417672 10.7557408 -1.6994662 10.8131641 7.4427777 5.4504162 4.1335635 9.4510524 12.2601291 9.7753904 11.1808280 12.6613804 7.3505193 10.5860726 10.0183554 10.8683889 10.9803705 5.0820298 11.4152262 9.5662855 -0.6992320 10.1714205 9.1779547 2.3051826 5.5767942 11.1174541 10.1268216 11.5290382 9.6343849 2.1080226 9.0045741 11.6054496 10.5677497 10.1027829 9.4222040 1.428800 0.958160 0.101620 0.101620 0.109060 0.044290 -0.041159 -0.728500 3.656900 1.223200 2.683600 0.049540 0.049540 -0.324840 2.456500 -0.342850 0.790260 0.088353 -0.097759 1.094300 -0.173100 -0.499230 0.314500 -0.409480 -0.349500 -0.333990 -0.336990 0.835300 -0.332250 -0.294140 -0.614990 0.101620 0.090225 0.105120 0.044290 -0.056242 -0.158130 -0.728500 -0.609280 -0.110370 -0.342630 0.535140 -0.725880 -0.708090 -0.324370 -0.310140 0.049540 0.049540 0.283740 -0.324840 -0.332140 -0.332140 0.088353 0.081322 0.081322 -0.714970 0.298030 0.297320 -0.176010 -0.311430 2.437400 0.301860 -0.410140 -0.349500 -0.336990 1.142900 -0.166120 -0.170310 -0.173860 0.000 0.000 -0.325 -0.325 0.000 0.000 0.000 0.298 -0.173 0.000 0.000 0.302 0.302 -0.681 -0.681 -0.334 -0.334 0.085 0.379 0.000 0.000 -0.197 -0.174 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 -0.630 -0.630 0.000 0.000 0.338 0.000 -0.324 -0.324 0.000 0.000 0.000 0.000 -0.325 -0.325 0.000 0.000 0.000 0.298 -0.173 0.000 0.000 0.302 0.302 -0.681 -0.681 -0.334 -0.334 0.085 0.379 0.000 0.000 -0.197 -0.174 0.000 0.000 0.102 0.102 0.000 0.000 0.000 0.000 -0.630 -0.630 0.000 0.000 0.338 0.000 -0.324 -0.324 0.000 0.000 8.4991156 8.2060576 5.5003432 10.6838348 10.9054553 7.4520674 11.3059441 9.3805686 8.1897178 -1.6994662 10.8116818 11.6507132 3.1586440 0.6225556 3.5101264 9.6192133 4.5485969 10.7269352 11.3004944 11.5502284 8.5987329 3.1080226 8.5964395 9.6913768 7.0787475 0.3006509 5.5294899 -1.6994662 10.2599480 8.9615576 7.4453286 7.4978870 6.1335615 10.2787910 11.2914836 2.6929851 8.9418191 NA 6.4855460 12.1175541 8.5040185 7.5270829 NA 7.6248510 8.0918336 4.4504195 5.3230385 NA 5.0688556 3.9776188 1.6226024 10.4627470 -0.1143475 9.5987331 10.7095309 10.1088302 5.8475660 8.9615576 13.3260264 7.0080297 4.3006729 4.9445258 11.7912707 2.5486092 NA 1.6226024 2.4705889 14.9454565 5.2893550 8.7015498 13.4069880 10.1168541 10.4091949 13.5853139 12.1187533 8.6304666 10.6903018 13.0369667 11.6282231 8.8417672 9.3041884 0.3006509 6.7559971 11.4322059 11.012122 12.842433 7.198516 13.617905 8.226967 5.792525 10.366423 9.581441 10.247763 6.062221 11.379655 11.117854 7.292193 -0.699232 10.630747 4.490493 8.423938 10.683835 10.235467 10.959997 9.992414 10.039185 9.368777 5.987171 12.105532 11.188082 10.699414 9.835460 11.071334 9.788511 10.379822 10.327885 8.945428 -0.699232 8.987644 7.390201 10.755741 7.565113 10.813164 7.560414 10.676253 9.451052 7.277950 13.166162 10.345065 9.747754 11.887158 10.385811 2.300680 2.760093 10.103591 10.460857 9.500343 TCGA-E2-A10A 41 0 NA 1229 breast stage iib t3 n0 (i-) m0 female 2007 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 NA 2 2 1 1 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.733986e-07 6.25 25 12.5 37.5 18.75 11.12221954 10.11361521 11.18906744 9.85570758 8.32798685 9.18306191 9.69112112 9.76641892 8.76855951 12.95496641 10.95725545 10.38385838 2.83031618 12.49063644 4.22886486 9.62650338 4.50016468 8.41937161 10.88362517 13.58338110 3.83031618 14.97301811 1.83033646 9.84029249 10.92211235 5.34816513 NA 10.05957214 10.76454330 0.69278426 6.64700936 7.25352795 -0.04409209 3.45834263 10.21244908 10.54612237 10.92930546 10.16204761 10.17823970 11.70613547 NA 10.31046396 14.47669095 10.29095100 11.56717949 12.06448057 11.37756145 4.43697466 6.91004304 9.39394598 11.92343375 -0.04409209 11.29755135 7.16530097 5.86273901 5.91004424 10.57117033 11.74116346 10.32979993 12.73884542 13.09123588 8.50016787 11.10897699 11.07196373 11.06371817 10.55947355 4.58033847 12.10124873 11.85696554 -1.62905459 10.22146230 9.02283328 2.84791675 5.28974964 11.39619733 11.32762388 10.47318854 9.67637655 0.69278426 8.09710298 12.06578669 11.28489603 9.95020068 10.16692428 1.55590000 -0.84203000 -0.00346270 -0.00346270 -0.00774820 0.04826200 0.00180300 -0.00492600 0.40477000 1.56550000 0.00138680 0.00917050 0.00917050 0.02174400 0.02174400 0.88546000 -0.83195000 -0.00358600 -0.00069303 0.01391100 0.86096000 0.01796300 0.01796300 0.01796300 0.01642500 0.01642500 0.01642500 0.03087300 -0.82668000 0.00471900 -0.00871460 -0.00346270 0.01866300 -0.00774820 0.00000000 0.00000000 0.00180300 -0.00492600 -0.00492600 0.00263570 0.00263570 -0.84643000 0.01293400 -0.76578000 -0.84026000 0.02300500 0.00917050 0.04075100 0.02174400 0.02174400 -0.83202000 -0.84555000 -0.83195000 0.01768400 0.07786200 -0.00069303 -0.83438000 0.03383100 0.84541000 -0.84499000 0.03087300 0.01796300 0.01544700 0.01642500 0.01642500 0.03087300 0.00458000 -0.83049000 -0.86578000 0.000 0.000 0.000 0.000 -0.809 -0.809 0.000 0.000 0.861 0.055 -0.790 0.000 0.000 0.000 0.000 0.000 0.000 0.944 0.944 0.000 0.000 0.000 -0.830 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.846 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.809 -0.809 0.000 0.000 0.861 0.055 -0.790 0.000 0.000 0.000 0.000 0.000 0.000 0.944 0.944 0.000 0.000 0.000 -0.830 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.846 0.000 0.000 0.000 0.000 0.000 8.86574038 NA 6.99293607 10.20693510 11.35654881 6.72632444 11.08470078 8.62769474 8.45266091 NA 11.68660037 11.24999694 2.17823658 NA 3.69281773 8.64584502 2.76319909 10.32907492 11.45136918 11.10665225 9.44033454 NA 8.23041967 10.30972917 5.40430710 3.50016468 2.27777651 NA 10.56533384 4.39325144 9.16854627 8.30457538 5.56070884 10.14516526 10.92930546 4.30162423 9.08255172 -1.62905459 8.12910782 11.66392522 8.82106505 6.83031618 -0.62905459 -1.62905459 6.78451314 3.12576680 3.69281773 -0.04409209 2.76319909 4.07741392 1.54082083 10.06654803 -1.62905459 4.69281215 10.49565230 9.74863750 3.37088963 8.40705825 12.98012119 7.26266805 1.83033646 3.83031618 11.81809712 3.65629042 NA 4.15224833 1.37088963 14.598436 6.085129 8.553279 12.490636 10.544874 9.522536 13.583381 14.131890 10.058260 10.261149 13.810359 9.726236 9.393946 7.241249 3.797148 7.191064 11.998305 10.9182613 12.1401027 7.7459244 13.5212239 9.1423741 3.5408084 9.2140206 9.4787557 10.4311179 5.8303162 8.9340809 10.9572554 6.1782406 NA 11.1956446 6.1910632 7.2541386 11.6370856 9.6098864 11.1297325 8.3424281 8.6723808 12.7232041 4.8627390 11.7689857 10.9293055 9.7300853 9.9726555 11.6683742 9.5193612 10.9435850 10.5997034 8.7823958 -0.6290546 8.8844642 8.7451092 11.9234338 4.4369747 11.2975513 7.3538781 10.6065998 10.5711703 7.3224023 13.1742838 9.6092894 9.3694752 13.1019385 10.0477234 NA NA 10.7706967 10.5579275 10.0025165 TCGA-E2-A10B 67 0 NA 1141 breast stage iib t2 n1a m0 female 2007 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 1 1 2 1 2 2 4 1 5 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 2.774378e-07 16.6666666666667 44.4444444444444 0 22.2222222222222 16.6666666666667 10.5058652 10.5407247 11.9769256 9.6697872 7.9496878 8.6813308 10.3164023 9.9702920 9.5363094 15.0735650 9.3060649 10.9461555 3.4344014 12.3222648 2.8869208 9.3463466 6.0993646 7.9889919 9.1744499 13.4255890 2.0933573 14.3080695 6.6376870 9.5389106 10.0038587 6.8375270 0.1865006 11.1528996 11.3194569 1.1865006 8.6873172 7.3080086 NA 4.4532608 10.1109166 11.2984260 10.8433470 11.2542458 10.2288187 11.6876905 3.6459091 10.5977215 14.5701965 8.2121826 9.7563215 11.8775645 11.3054164 4.4152922 3.6783311 9.3183322 12.2610349 NA 9.8549171 5.4993580 5.8659559 4.6942673 10.4029180 11.5416887 10.6218851 11.8117275 12.6062380 8.7236937 11.3659179 11.0037808 11.1987507 11.0894157 5.4344014 11.6111665 10.5343734 -1.8134994 10.1533412 8.4485702 4.2754243 5.3362227 10.7995741 9.8764734 9.9853521 9.4885429 9.0436789 8.5407248 12.4816703 11.5854861 10.4080624 9.4361814 0.9542700 1.0061000 0.1566600 0.1694400 -0.0193140 0.8139600 -0.0377820 -0.0178030 -0.0264410 -0.0264410 -0.0264410 -0.0366990 -0.0283550 -0.0319050 -0.0545480 -0.0545480 0.8305800 0.8305800 -0.0206870 -0.0305400 -0.0468540 -0.0524570 -0.0524570 -0.0524570 0.4029400 0.4029400 0.4029400 0.9346700 -0.0299940 -0.0299940 0.0061090 0.1566600 -0.0193140 -0.0042929 0.8139600 0.8139600 -0.0433310 -0.0178030 -0.0175290 0.2437200 0.2460700 -0.0264410 0.5429400 0.5429400 0.5429400 0.5429400 -0.0283550 -0.0283550 -0.0319050 -0.0545480 -0.0279450 -0.0403700 0.8305800 0.8278800 0.7873600 -0.0183530 -0.0305400 -0.0305400 -0.0414310 -0.0431950 -0.0524570 -0.0524570 0.4493500 0.4029400 0.4029400 0.9346700 0.7472700 -0.0670560 -0.0670560 0.000 0.000 0.000 0.000 0.831 0.831 0.000 0.000 0.000 0.969 0.000 0.000 0.000 0.449 0.449 0.403 0.403 0.000 1.006 0.935 0.935 0.726 0.000 0.000 0.000 0.157 0.157 0.000 0.000 0.814 0.814 0.000 0.000 0.246 0.246 0.000 0.000 0.543 0.543 0.207 0.207 0.000 0.000 0.000 0.000 0.831 0.831 0.000 0.000 0.000 0.969 0.000 0.000 0.000 0.449 0.449 0.403 0.403 0.000 1.006 0.935 0.935 0.726 0.000 0.000 0.000 0.157 0.157 0.000 0.000 0.814 0.814 0.000 0.000 0.246 0.246 0.000 0.000 0.543 0.543 0.207 0.207 8.4260739 2.2739336 7.4602708 10.2126529 11.2370042 6.7329841 11.4643439 10.1831925 8.7535758 0.5084287 10.7511011 11.5588861 2.8303365 4.3362191 1.5084287 8.4344026 4.3563974 10.8611089 11.3021693 10.9058641 9.7124854 5.7863873 7.7217506 9.8624323 6.6662553 5.1751613 0.1865006 NA 10.0963683 7.7882459 6.2198984 8.1779970 6.1406723 9.4987513 11.0801560 4.9413646 8.8703471 NA 7.8048609 12.0913921 8.0319653 7.0568404 NA 5.1289903 8.5252119 -1.8134994 3.9143923 -1.8134994 5.6294178 4.4540113 2.5084033 11.2135173 1.1865006 7.3336804 10.0030590 10.3378091 5.5263255 9.8734135 13.1091991 8.4948144 3.0444641 4.2088450 11.3408188 6.1053386 NA 2.9413693 1.6458861 11.0429009 6.0066548 7.9986525 12.3222648 10.1034743 10.8823561 13.4255890 12.2694559 8.7582279 11.6624620 13.1330161 9.6438562 9.3183322 9.3093033 0.7714631 6.8694705 12.0756941 11.580268 11.635495 8.797500 14.203238 8.815832 5.993831 9.660688 8.722723 11.607158 6.641803 8.609591 9.306065 6.583080 2.356397 10.449451 7.386148 7.547103 10.986162 10.412887 10.377535 7.476494 8.318332 13.380039 5.405645 10.835689 10.843347 10.816287 9.462018 11.586287 10.295326 10.169825 11.141580 9.221962 2.993837 9.496656 10.576373 12.261035 5.105339 9.854917 7.713952 10.393911 10.402918 7.379064 12.953263 10.397147 10.243452 13.061649 10.339711 1.886901 NA 10.769558 10.242436 9.892108 TCGA-E2-A10C 54 0 NA 1220 breast stage iib t2 n1a m0 female 2008 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 3 2 5 2 4 3 2 2 6 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 8.600573e-06 3.086496e-06 8.43023255813953 81.6860465116279 1.45348837209302 4.94186046511628 3.48837209302326 9.75557996 8.41607716 10.74402087 6.84709995 9.13769076 9.98216322 9.52256192 9.92682775 9.56486189 13.03086922 10.00705531 10.07544225 2.38766583 12.87001857 2.38766583 9.05752040 4.05751959 8.37118072 9.78076678 12.68874937 4.70959944 12.96595586 4.62867446 9.61210918 10.67894436 7.28138390 -0.07172444 10.42990537 11.31248145 1.92823766 7.61823498 5.89402224 NA 3.78621996 9.12053002 10.28908436 9.17260127 9.41507244 9.43305625 11.20145014 3.25015817 9.64076425 13.88869185 7.79214476 9.86781648 10.50472168 10.46108025 5.17616317 -1.07187607 6.94504580 9.72184069 NA 10.38561816 4.76112567 6.89402103 4.45179796 9.44196499 12.05961202 9.60066263 10.35973496 12.66928291 7.20900782 9.97944620 9.41908819 10.23714518 9.96578428 2.09815002 10.87258339 8.02099438 NA 10.58376803 8.91692204 4.01570273 4.90551938 10.70302437 9.27364246 9.82229724 9.98148451 1.25017333 9.11806195 12.66685741 10.86192800 10.25522855 9.87441261 0.438680 0.438680 -0.237040 -0.237040 -0.049965 -0.035176 0.602800 0.124470 0.825100 0.825100 0.825100 0.099724 3.656900 -0.205350 -0.205350 -0.073343 0.462460 3.656900 -0.239120 0.451900 -0.153240 0.122990 0.122990 0.122990 0.017963 0.140130 0.140130 0.188740 -0.234350 -0.234350 0.117560 -0.237040 -0.049965 -0.049965 -0.035176 -0.212800 -0.244360 0.059370 0.124470 0.458540 0.451560 -0.252730 0.000000 0.000000 0.000000 0.000000 -0.242410 -0.242410 -0.233350 -0.205350 -0.073343 0.866320 0.447040 -0.248370 -0.248370 -0.239120 0.451900 0.451900 -0.232140 -0.243500 -0.129240 0.122990 -0.229690 0.017963 0.140130 0.188740 -0.227970 -0.155150 -0.155150 -0.242 -0.242 -0.132 0.000 0.447 0.447 -0.239 0.452 -0.153 0.994 -0.244 -0.006 0.123 -0.230 -0.230 0.000 0.122 0.204 0.439 0.189 0.189 -0.228 -0.155 0.118 0.118 -0.237 -0.237 0.000 0.000 0.000 -0.178 -0.175 -0.175 0.459 0.459 -0.253 0.572 0.000 0.000 0.000 0.000 -0.242 -0.242 -0.132 0.000 0.447 0.447 -0.239 0.452 -0.153 0.994 -0.244 -0.006 0.123 -0.230 -0.230 0.000 0.122 0.204 0.439 0.189 0.189 -0.228 -0.155 0.118 0.118 -0.237 -0.237 0.000 0.000 0.000 -0.178 -0.175 -0.175 0.459 0.459 -0.253 0.572 0.000 0.000 0.000 0.000 8.48857004 NA 6.75478598 10.62433553 11.71715952 7.92389138 10.97570212 7.07070166 10.05277873 0.92819975 12.51542884 11.57591160 2.51318752 2.25017333 3.45180456 8.91692204 4.70959944 10.97740522 11.20319779 10.67180950 9.92471083 6.42008991 8.76428776 9.99567163 7.27696558 4.57209536 1.25017333 -1.07187607 10.24734486 6.68978836 8.71777100 7.01038600 8.71940012 10.10231405 9.90551728 3.32055688 8.76270825 -1.07187607 5.15705584 11.42459184 8.88243366 7.65955642 0.92819975 4.38766583 8.72751889 NA 5.01569827 -1.07187607 7.15705584 4.83609076 2.62868029 9.99163238 3.88243763 8.18562525 10.62520482 9.50377665 5.33762904 10.97297297 12.23913408 8.00505297 4.81088006 4.92823766 10.09314432 2.25017333 0.51318752 NA -0.07172444 10.988981 6.482826 9.552119 12.870019 10.067789 10.962004 12.688749 10.816219 8.210353 10.035454 12.783787 7.656158 6.945046 8.142556 2.928238 7.539262 11.118062 11.0671490 13.2399856 6.1856248 12.6796695 8.7145069 7.3999128 8.8426225 8.5539460 10.4613772 7.6112321 8.7939706 10.0070553 5.7355926 -1.0718761 10.9137235 5.2320198 7.2171493 11.3948236 10.6667519 11.4325598 7.2945592 9.0918870 6.5720938 5.8471000 11.9910947 9.1726013 11.2948328 10.1684324 10.7583563 9.0639467 9.3032769 10.3732522 6.9169220 0.9281997 9.6728609 8.5337537 9.7218407 6.7420183 10.3856182 9.0716206 10.6256394 9.4419650 6.7862187 13.5412210 10.0361082 10.4305719 12.1770544 11.0507418 3.8351257 3.1761632 10.5141387 9.4741671 9.5047217 TCGA-E2-A10E 64 0 NA 865 breast stage iia t1c n1a m0 female 2008 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 1 1 2 1 2 2 4 2 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.040392e-07 41.6666666666667 12.5 0 25 20.8333333333333 9.67988787 9.97613920 11.24021992 9.56289492 8.63683593 8.79167377 10.08247747 9.75606255 10.17410151 13.47978691 11.80562523 10.53575875 -0.08988138 13.09544163 4.49501074 8.88923685 6.45951359 8.37357427 10.34849525 13.98134470 1.32509854 14.45037983 7.51243945 9.87092073 10.86787747 7.77010223 0.32504096 10.67961231 9.93841651 2.49500435 7.63569998 6.27345435 -0.67484388 2.71740773 10.19197995 10.99927974 10.99817561 12.33867182 10.25804033 11.77526771 4.20772890 11.04469014 14.56891225 9.71837601 9.64701548 12.09203039 11.78234004 4.75135124 5.66493788 8.85256446 12.84944551 -1.67484388 11.60455295 6.44402925 5.91004904 4.41255122 10.79065387 12.01147855 10.58218057 12.28599441 13.12046763 8.43099607 10.65684420 10.23255656 11.82131707 10.47197429 5.13244112 11.80638235 10.91777805 NA 10.25138347 9.04104937 3.91064633 5.14526578 11.30093541 10.25693304 9.93288013 9.68976932 1.49502994 9.86569987 13.87342773 10.91824512 10.38341745 8.90157169 0.67178000 0.67178000 0.00000000 0.00000000 -0.00691950 0.09260500 0.00847430 -0.00904220 0.00083195 0.00083195 0.00083195 0.00706920 0.01265500 0.00937070 0.72546000 1.97760000 -0.00013862 -0.00013862 -0.05339100 0.00903120 0.02202400 0.01488800 0.01488800 0.01488800 -0.00398080 0.01754400 -0.00816240 0.07887100 -0.71942000 -0.71942000 -0.00622860 0.00000000 -0.00691950 0.03679100 0.04287400 0.04287400 0.00471900 -0.00904220 0.01474900 -0.00346270 -0.00346270 0.01558700 0.01614600 0.01614600 0.01614600 0.01614600 0.01265500 0.01265500 0.01992300 0.00937070 -0.73073000 -0.73073000 -0.00013862 -0.00013862 -0.00013862 -0.05339100 0.00903120 0.01656500 0.02202400 -0.75122000 0.01488800 0.01488800 -0.74681000 -0.00398080 -0.00816240 0.07887100 0.01447000 0.04131700 0.04131700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.713 0.000 0.000 -0.720 -0.720 0.000 0.000 -0.719 0.672 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.713 0.000 0.000 -0.720 -0.720 0.000 0.000 -0.719 0.672 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.74082909 7.31092900 7.55870693 10.34050252 10.93565097 6.49511311 11.13846784 8.78153414 8.93043724 3.18307358 12.39822484 10.96027502 1.78450398 2.91004184 4.61048747 8.87487226 3.41255122 9.49501254 11.54410469 11.11787773 9.38983028 5.57301393 7.62886835 10.28255228 6.28508960 6.54908846 1.13244523 NA 10.73712800 7.61970792 6.63342685 9.13002504 6.47483511 10.64973212 10.86908592 3.13244523 8.35299328 NA 8.70338245 12.21611163 8.76803078 6.86424682 NA 7.03589439 8.41122369 -0.08988138 1.91004184 -0.67484388 5.27928556 6.63996577 2.13244523 10.30594100 NA 7.13565902 10.18733735 9.96397589 5.75971512 10.15362068 13.50666680 7.09987482 2.13244523 3.68264071 13.10116058 3.75135660 -1.67484388 2.32509854 0.64699208 14.062019 5.832882 8.312352 13.095442 10.078254 11.036754 13.981345 12.408401 10.641182 10.685111 13.834429 9.590702 8.852564 9.077468 -1.674844 7.228970 11.707711 11.232542 11.997292 8.555108 14.446903 8.477372 6.053007 8.587182 9.011588 10.533675 6.025527 7.246929 11.805625 6.428375 2.325099 11.436060 7.103165 7.266810 10.314127 10.040191 11.282734 8.512439 7.676027 12.399313 5.628867 12.520519 10.998176 10.058526 9.809910 11.983857 9.108086 10.755017 10.521382 8.593044 NA 8.824166 8.793416 12.849446 4.832880 11.604553 6.713105 10.687305 10.790654 6.976139 12.844601 9.469746 9.822440 13.353857 10.386796 4.939795 1.105410 11.032015 10.437201 9.590702 TCGA-E2-A10F 47 0 NA 878 breast stage iia t2 n0 (i-) m0 female 2008 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 1 2 2 1 NA NA 4 4 4 5 NA NA 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.080784e-07 41.6666666666667 20.8333333333333 4.16666666666667 12.5 20.8333333333333 10.6119290 10.0865030 11.9550002 9.9389384 8.3720166 9.7221413 10.0148599 9.8059130 9.4263470 7.9862095 11.0607269 10.6272521 1.8610422 12.5983019 3.4933271 9.6587160 6.9228306 8.2653445 8.8222149 12.9219530 2.2395813 13.6568507 5.2805926 9.2955828 11.0229422 7.2150835 -1.4607667 10.6580675 9.1602625 2.4460180 8.0249557 7.9421385 -0.4609653 4.0309805 9.9114474 10.4965913 9.7631280 11.4236785 9.4025384 11.2181666 2.7870563 10.8132133 14.8996135 9.3430718 9.7697293 10.9823290 10.9432036 5.1684816 3.7090480 9.2940139 11.5998223 -0.4609653 11.5016610 8.6619544 7.1684826 5.9903377 10.6888735 12.0322313 10.6299004 12.8552665 12.9451985 8.4460171 11.0857798 10.7317121 11.7861638 11.0785276 4.8966787 12.1329843 12.0518669 -1.4607667 10.5632272 9.1269040 3.6278636 6.4933223 10.6450349 9.8988760 10.2721417 9.8417653 4.4460180 9.8175759 13.5946631 12.0550726 10.2998463 9.7027761 0.72886000 0.72943000 -0.00346270 0.00000000 -0.06477700 0.01363200 -0.05792400 -0.45147000 0.02314500 0.02314500 0.02314500 -0.08572200 -0.08572200 0.01530800 0.01530800 0.01530800 0.01153900 0.01153900 0.00722170 0.01782400 -0.04224500 0.02791900 0.02791900 0.02791900 0.01363200 0.01363200 0.01363200 0.02763700 -0.05361100 -0.05361100 -0.00013862 0.00000000 -0.06477700 -0.06477700 0.01363200 0.01363200 -0.05792400 -0.45147000 -0.45147000 -0.06558100 -0.06558100 0.02314500 0.01712400 0.01712400 0.01712400 0.02651400 -0.08572200 -0.08572200 0.01530800 0.01530800 0.01530800 0.01028500 0.01153900 0.01153900 0.01153900 0.00722170 -0.42996000 -0.42996000 -0.42407000 -0.43116000 -0.42549000 0.02791900 -0.04915400 0.01363200 0.01363200 0.02763700 -0.08107300 -0.40584000 -0.40584000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.449 0.032 -0.425 0.000 0.000 0.000 0.000 0.000 0.000 0.729 0.000 0.000 0.000 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.449 0.032 -0.425 0.000 0.000 0.000 0.000 0.000 0.000 0.729 0.000 0.000 0.000 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.2009045 0.5391340 6.0309805 10.7344986 11.1614070 6.8123622 11.2291244 9.5613832 8.6153140 2.1240965 11.4048597 11.4816024 3.3464747 2.9314372 3.6684142 7.9548681 4.2670488 11.1146656 11.2831193 11.0374770 9.1080325 6.1390397 7.5559350 9.8689227 6.9141662 6.3139133 2.9985566 NA 10.9970202 6.3656750 7.4309100 8.2203648 5.1240882 10.0959629 10.8825898 3.4933271 8.9851759 NA 8.0189067 12.0939551 8.5642661 7.2873190 -0.4609653 1.3464747 8.3767544 1.3464747 4.9141674 NA 5.5944082 5.3948674 2.7090480 10.5016610 NA 7.8383341 10.5081531 9.9643423 4.7289490 9.9995823 13.1360732 9.3609004 4.6265910 4.0309805 10.1906266 2.7090480 NA 3.7485793 1.1240634 13.490092 5.738798 8.338408 12.598302 10.468755 10.979736 12.921953 12.284591 9.597118 10.996764 13.490502 11.117735 9.294014 10.286061 0.539134 7.215083 10.950108 11.3761629 11.8477499 7.2636401 13.3412873 8.9985580 6.6052158 8.9893068 8.7314192 10.3152468 7.6212753 5.1538378 11.0607269 7.9862095 4.8789754 11.8169949 5.9228306 7.1520313 11.9134867 10.3589063 10.0612175 9.4278697 8.2395661 12.2214627 5.4460180 11.3252755 9.7631280 10.6172772 9.7289509 10.4998524 10.0168847 10.2742593 10.6860133 9.6496097 0.8610819 9.5629153 8.0540773 11.5998223 4.6888741 11.5016610 8.0802233 10.5618479 10.6888735 7.5916944 13.9351625 10.1203269 10.3802976 13.1564791 10.6626012 1.8610422 -0.4609653 10.3680562 9.6964733 9.6977361 TCGA-E2-A14N 37 0 NA 1434 breast stage iib t2 n1 m0 female 2007 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 3 3 4 4 1 1 5 5 4 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.421869e-06 4.508365e-07 8.92857142857143 26.7857142857143 5.35714285714286 33.9285714285714 25 8.8218846 8.5670868 11.0686873 8.4938911 9.2938204 9.5439621 7.7322841 10.7722627 11.4429456 12.3128195 10.9907014 10.9005241 0.4224483 10.2037883 1.4224483 10.3407949 7.8486930 9.0913135 9.7078309 7.0223412 NA 11.9585139 7.8763849 9.3629868 11.1170766 5.5517129 2.2968979 8.6576450 10.7178149 -0.1624604 7.2297831 7.7770455 NA 0.4224483 8.5344336 10.7858333 9.4299230 9.5923535 9.0420372 10.3717689 2.7443549 8.2233284 13.8514865 7.7917496 9.6048228 10.7989158 10.9979678 5.0469188 NA 9.5636842 11.8081113 NA 8.4429456 6.7858330 6.3293192 5.4521770 8.3253059 12.3872507 10.7375781 10.9910181 13.2147444 5.8598329 10.7428531 10.1817620 11.3712825 10.3358166 3.5923494 13.3158565 6.1320874 -1.1626218 10.5487029 10.5090071 2.6448254 6.8763856 8.7682035 10.1222902 10.1789848 10.3422851 0.4224483 5.0853949 13.7545584 13.1603801 10.0229610 9.0936748 0.11638000 0.25652000 -0.09828600 0.38419000 0.24958000 -0.12148000 -0.04747600 -0.02685100 0.22623000 0.22623000 0.54524000 0.43243000 -0.13355000 0.09696100 0.09696100 0.09696100 0.28945000 -0.06652000 -0.10802000 0.00000000 -0.04414400 -0.04048000 -0.04048000 -0.09177000 0.12182000 0.12182000 -0.09512000 0.02862200 -0.12707000 0.09202500 -0.10828000 -0.09775900 -0.17284000 -0.11103000 -0.12148000 -0.12148000 0.14890000 -0.02685100 -0.02685100 0.26891000 -0.19287000 -0.30028000 0.56881000 0.22453000 0.22453000 -0.08598800 -0.10828000 0.25840000 0.09696100 0.09696100 0.06871500 -0.30956000 0.28945000 -0.06652000 -0.06652000 -0.11741000 0.00000000 -0.19831000 -0.10148000 -0.09214800 -0.04048000 -0.04048000 -0.09247800 0.12182000 -0.09512000 -0.09406400 0.10424000 -0.10959000 0.00013863 0.324 -0.108 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.122 0.122 0.124 0.124 -0.106 -0.106 0.000 0.000 0.000 0.000 0.235 0.235 -0.111 -0.111 -0.121 -0.121 0.000 0.000 0.000 0.000 -0.037 0.226 0.225 0.225 0.000 0.000 0.324 -0.108 0.000 0.000 0.000 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.122 0.122 0.124 0.124 -0.106 -0.106 0.000 0.000 0.000 0.000 0.235 0.235 -0.111 -0.111 -0.121 -0.121 0.000 0.000 0.000 0.000 -0.037 0.226 0.225 0.225 0.000 0.000 8.7518513 NA 3.8374690 10.2426075 11.2933070 6.5223555 9.8003620 8.8698563 7.7375779 -0.1624604 11.0272906 10.7522548 1.6448254 NA 4.1228715 10.6134878 2.0073749 9.2135915 11.6288325 11.1523325 10.4858237 2.7443549 9.0086429 10.0389774 6.3610279 8.0830187 NA 1.6448254 11.1853642 2.7443549 7.7974683 9.3412918 6.8430907 9.5248418 10.4480296 1.1593708 8.4016155 3.1593870 7.0995614 12.1225793 7.6512469 5.3766238 -0.1624604 3.6954482 8.9859427 -1.1626218 0.8374589 NA 6.7799806 1.4319973 1.4224483 11.0098936 1.1593708 9.7563293 10.6035808 10.6962242 4.6703588 9.8995122 14.3428124 7.9089282 4.1593951 3.2297879 10.3106645 0.8374589 8.3353180 1.1593708 6.0566355 10.518704 9.690776 9.305072 10.203788 9.937471 11.746609 7.022341 8.675094 9.382208 11.036218 13.550047 13.216980 9.563684 8.934181 4.695448 8.059053 11.099267 10.444796 11.329820 4.392056 13.540232 9.347241 9.040814 8.866753 7.195018 9.386548 5.837466 4.644820 10.990701 11.432490 NA 9.774104 6.132087 8.965925 12.312693 10.197765 9.509007 8.237833 8.625369 8.092494 6.452175 11.726432 9.429923 10.644821 10.349219 10.732284 9.770419 11.303797 10.185641 8.787293 NA 9.474480 6.530952 11.808111 5.803250 8.442946 8.742853 10.627407 8.325306 8.129788 14.847229 10.536605 11.448030 12.577036 11.351194 5.523966 NA 10.557710 8.771157 9.094854 TCGA-E2-A14O 76 0 NA 1359 breast stage iiia t3 n1a m0 female 2008 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 1 1 1 NA 4 3 1 1 1 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 40.7407407407407 7.40740740740741 3.7037037037037 25.9259259259259 22.2222222222222 9.4088806 9.2752848 10.9597000 6.7577753 10.2961300 7.7816227 9.0051409 9.4753760 8.9061676 13.7474278 11.7973041 10.5166159 3.0028825 12.8002256 2.1403860 8.8794053 6.2882903 7.7577760 9.3648320 13.4055273 1.4883093 14.3719403 3.5878450 10.5607310 11.5274300 6.2583889 2.2659169 8.4071785 11.0324516 -1.3190456 6.0560004 6.7088659 NA 1.4883093 8.9371690 10.6682242 9.6351565 10.4483171 8.9229432 10.1264924 0.2659169 11.1927129 13.9870931 7.3783105 8.5938494 11.0407097 10.3826998 2.6809544 0.6809544 8.3066692 11.4352214 NA 11.7316591 3.6351507 4.2659244 4.6351565 9.5225245 11.9302218 10.8265740 11.6386064 12.1480562 8.9277006 10.2701431 9.4182075 10.4122793 9.8211509 2.6809544 11.8094379 10.2341094 -1.3190456 10.3445183 9.0754230 1.1638207 3.3813941 10.5810722 9.5311471 10.0646645 9.3604402 -1.3190456 8.8521368 13.2126462 10.3770583 10.1597298 9.1249396 0.935080 0.935080 0.332700 0.318350 -0.434200 0.457340 -0.057960 -0.054420 0.836080 0.836080 0.836080 0.219450 0.219450 0.515940 3.656900 -0.437450 0.692600 0.677710 -0.445230 0.062365 -0.446090 0.492510 0.492510 0.492510 -0.229200 -0.229200 -0.229200 0.493380 -0.419810 -0.404950 -0.417940 0.332700 -0.434200 -0.434200 0.457340 0.457340 -0.065313 -0.054420 -0.056173 0.036653 0.036653 0.836080 -0.459180 -0.448460 -0.448460 -0.449100 0.219450 0.219450 0.515940 -0.476810 -0.454150 -0.454150 0.692600 0.677710 0.677710 -0.445230 0.062365 0.062365 -0.446090 -0.452330 -0.476170 0.492510 -0.435180 -0.229200 -0.229200 0.502660 0.402440 -0.467700 -0.467700 0.219 0.219 0.064 -0.452 0.678 0.678 -0.445 0.000 -0.446 0.430 -0.452 0.016 0.493 -0.435 -0.435 -0.229 -0.229 -0.405 0.530 0.493 0.493 0.402 -0.468 -0.418 -0.418 0.318 0.318 -0.434 -0.434 0.457 0.457 0.000 0.000 0.000 0.000 0.836 0.836 -0.448 -0.448 0.000 0.000 0.219 0.219 0.064 -0.452 0.678 0.678 -0.445 0.000 -0.446 0.430 -0.452 0.016 0.493 -0.435 -0.435 -0.229 -0.229 -0.405 0.530 0.493 0.493 0.402 -0.468 -0.418 -0.418 0.318 0.318 -0.434 -0.434 0.457 0.457 0.000 0.000 0.000 0.000 0.836 0.836 -0.448 -0.448 0.000 0.000 8.6539399 -1.3190456 4.7033278 11.2901389 11.9719870 7.1111618 11.1813042 5.7468341 9.6100707 -0.3190456 11.4230591 13.1980636 4.2355509 4.4358486 1.0028825 8.2696747 2.1403860 9.1403919 11.0538252 11.0341070 9.8995234 6.3391712 8.2064811 10.8182716 4.6351565 11.1378279 -1.3190456 NA 11.2880593 3.1403860 5.0559982 7.4325043 7.5998236 10.3919947 10.1424396 0.2659169 8.5590111 NA 4.7253540 11.1285601 7.7470496 7.0689771 NA 6.6525037 9.1373147 2.6809544 3.4358419 NA 3.5389354 5.0905190 1.2659169 11.4759852 -1.3190456 6.3674602 9.9698262 10.4802418 4.1403942 10.0017607 11.1421838 5.9938442 2.7684173 2.7684173 13.1775643 1.2659169 NA 1.0028825 -0.3190456 15.211731 5.725354 8.402060 12.800226 9.781622 11.446661 13.405527 10.884002 8.529317 10.725696 13.100723 8.972131 8.306669 9.968095 -1.319046 7.878177 11.036036 9.900734 11.456776 8.042904 13.318602 8.162759 3.680966 9.545920 9.082906 9.200370 5.002887 3.073272 11.797304 7.850885 2.381394 9.890414 2.928882 6.761885 8.483476 9.449145 11.054641 9.734207 10.369648 9.360440 3.810248 11.729595 9.635157 10.827847 10.287828 11.054097 8.608738 9.738952 10.094588 6.885532 2.587845 8.367216 7.306669 11.435221 3.002883 11.731659 5.611698 9.531928 9.522524 6.449144 13.202929 10.409731 9.831977 12.795353 9.965206 4.488316 2.002883 9.784904 9.391767 8.245110 TCGA-E2-A14P 79 0 NA 1246 breast stage iiic t2 n3 m0 female 2008 NA yes infiltrating ductal carcinoma 10 white not hispanic or latino 3 2 1 NA 1 1 2 6 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.664627e-06 7.629541e-07 18.3098591549296 40.8450704225352 4.22535211267606 19.7183098591549 16.9014084507042 10.1206733 9.4145138 12.1410278 8.3940498 8.3837077 9.3380156 10.1463905 11.7325420 10.5023750 16.0151422 10.7190659 11.8892575 2.9277258 17.4550153 4.2647691 9.9407237 7.0548441 8.3819768 6.9744249 13.0853446 NA 12.2830828 5.7458934 10.1321741 10.7354255 7.2382251 2.5866927 9.3027712 11.5778386 -1.3201259 9.9283247 9.1786534 0.2647166 4.2945105 9.8696287 10.5342830 9.9471761 10.0067954 10.2713266 10.5605357 12.4459189 10.4975873 15.0106160 7.1872818 9.7771779 12.1825117 10.3064258 4.0721230 3.3802446 11.3116633 11.9868626 NA 11.3553202 4.5126946 5.2189632 5.3663047 10.1170360 11.9337994 9.3845725 11.2018953 13.0280482 6.2343921 10.7589556 10.0876827 11.3389082 11.2748285 5.3802446 12.1744098 9.1524950 NA 10.3384620 7.9675168 4.1064070 4.5866927 11.1410278 10.2141071 9.4782760 8.0891952 1.8497191 9.2092348 12.5891348 11.5037685 9.8403059 11.0271487 0.47821000 0.73910000 -0.01835300 2.11450000 1.21010000 1.30600000 -0.02630400 2.36600000 0.39828000 1.20250000 0.43733000 -0.04319500 -0.01133500 -0.00041585 1.32210000 -0.02862800 0.40577000 0.00069327 0.40039000 1.33690000 -0.02876500 0.91460000 3.65690000 3.65690000 -0.09881400 -0.08080700 -0.10145000 3.65690000 0.76389000 -0.00581400 0.39131000 -0.00484610 -0.52440000 -0.01285100 -0.00221680 -0.00221680 -0.02630400 0.00332990 0.43598000 0.35202000 -0.04170200 -0.52123000 -0.02671400 -0.92503000 -0.46812000 -0.08027500 -0.01133500 -0.04414400 -0.08067400 0.79743000 -0.04102400 -0.02849100 0.40577000 0.00000000 -0.06061400 -0.00498440 0.43631000 0.41396000 0.37693000 0.38786000 -0.05980700 0.29135000 -0.01711600 -0.10539000 -0.10145000 0.36117000 1.55810000 -0.07187300 -0.05576900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.436 0.000 0.000 0.000 0.000 0.000 0.392 0.000 0.000 0.000 0.000 0.000 0.341 0.341 0.392 0.000 0.409 0.409 0.000 0.000 -0.466 0.000 1.286 0.000 0.000 0.000 0.420 0.420 0.000 0.000 0.000 0.000 -0.074 -0.074 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.436 0.000 0.000 0.000 0.000 0.000 0.392 0.000 0.000 0.000 0.000 0.000 0.341 0.341 0.392 0.000 0.409 0.409 0.000 0.000 -0.466 0.000 1.286 0.000 0.000 0.000 0.420 0.420 0.000 0.000 0.000 0.000 -0.074 -0.074 8.6354540 4.5866927 6.8794767 10.0422960 13.8062667 6.4433481 11.9249112 8.6391685 8.5515556 -0.3201259 10.4136669 12.7201693 4.1060719 3.4871647 0.6797841 9.4652566 3.7672628 10.2295889 12.2011592 10.7659404 9.3018560 1.6797841 7.4871591 9.9605750 6.8193552 7.6513474 3.2033735 NA 10.9929707 4.5866927 8.1776562 9.2170225 8.5408909 9.6712622 10.0056717 1.6797841 8.8346224 -0.3201259 7.4578815 12.6127571 7.2496596 5.8497291 NA 8.2703911 7.7377956 -0.3201259 1.0017302 0.2647166 6.4999830 2.7672734 3.1392403 10.0532132 5.7132284 10.4017578 10.6617281 9.7405001 5.8193565 10.3023137 12.7170937 7.3091607 5.3236619 3.9652025 10.6652903 -0.3201259 NA -1.3201259 1.0017302 13.6863889 7.8794767 9.7974472 17.4550153 9.8403059 11.3787259 13.0853446 10.3064258 8.9500995 10.9029008 12.5911962 9.6046166 11.3116633 8.7377959 0.6797841 9.8358873 12.7270985 12.294399 14.190507 5.394051 12.844631 7.764613 7.001732 9.396624 9.745893 10.906322 6.622318 9.346028 10.719066 4.001730 NA 10.831138 8.364553 9.626491 12.188094 12.164249 11.144350 7.376771 10.201895 8.217023 7.636906 10.270934 9.947176 10.456237 10.522155 11.717351 10.007357 9.913424 9.876406 8.975573 6.309162 9.403866 7.182517 11.986863 8.149446 11.355320 4.072123 10.736103 10.117036 6.719052 14.294083 11.578783 10.629631 11.366086 11.438027 5.849729 NA 9.468522 10.224769 9.336229 TCGA-E2-A14Q 50 0 NA 1163 breast stage iib t2 n1mi m0 female 2008 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 1 2 NA 2 2 3 3 4 3 2 3 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.733986e-07 25 30 0 20 25 9.971995547 9.532274096 11.242875296 9.104897482 9.018901461 9.082108315 10.456604837 9.758080604 10.358990683 13.703276485 10.563617481 10.564882372 1.868212636 12.306455727 3.052659337 9.244849726 7.779486930 8.135017653 10.495930656 12.822361143 -0.006216965 13.956386758 6.129899122 9.726777074 10.607244397 6.001257302 -0.006216965 10.516343389 9.888074402 1.578745536 7.447718038 7.732980059 1.216175457 4.081228830 9.745305915 9.363722585 9.915602761 11.050173732 9.667365278 11.054232574 3.801117258 11.539048132 14.503227577 8.305464887 10.012425648 10.901153281 10.556004281 5.023508201 6.397484685 9.100542766 12.939510457 NA 10.109672537 6.136720485 5.254287906 4.339536494 10.394285509 11.926960697 10.650484640 12.443340390 12.939815194 8.214543037 10.668542614 10.175116989 11.203215169 11.197925393 4.315689396 12.294019051 11.212728608 -1.591179465 10.382855380 8.935298555 4.023805353 5.868229925 10.716569390 10.220976686 10.081224702 9.715430617 5.637618940 9.159506329 12.828627873 12.310326202 10.004989090 9.846031274 0.59116000 0.59116000 0.01447000 0.02094900 -0.59107000 0.01458400 0.00013863 0.00013863 0.00944910 0.00944910 0.01042400 -0.00290910 -0.00290910 0.00471900 0.00471900 0.00471900 -0.57200000 -0.00027724 -0.06276400 0.02062300 -0.00733390 -0.57704000 -0.57704000 -0.00304750 -0.02644100 -0.02644100 2.90240000 0.00000000 -0.01285100 -0.58117000 -0.01285100 0.01568900 0.00583090 -0.58569000 0.01458400 0.01237600 0.00013863 0.00013863 0.00013863 -0.00069303 0.00652620 0.00944910 -0.00318590 -0.00318590 -0.00318590 -0.00318590 -0.00290910 -0.00290910 0.00471900 0.00471900 0.00168420 0.00168420 -0.57200000 -0.01092200 -0.01092200 -0.05725000 0.54930000 0.00319100 0.00041593 -0.58902000 -0.57704000 -0.57704000 -0.43572000 -0.02644100 -0.02862800 0.00000000 0.01140000 -0.58941000 -0.59334000 0.000 0.000 0.000 0.000 -0.561 0.000 0.000 0.000 0.000 0.520 -0.589 -0.574 0.000 -0.401 0.000 0.000 0.000 0.000 0.591 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 -0.582 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.561 0.000 0.000 0.000 0.000 0.520 -0.589 -0.574 0.000 -0.401 0.000 0.000 0.000 0.000 0.591 0.000 0.000 0.000 -0.593 0.000 0.000 0.000 0.000 -0.582 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9421291 NA 4.8350651 10.7525402 11.4490890 7.2481287 10.8943771 9.1412297 9.1504769 1.4088205 11.2937330 10.8315737 5.3513138 2.7307269 3.5380787 7.6661871 3.1092435 10.2860834 11.9832746 10.8921113 9.2345531 7.8181904 7.9343201 10.3821380 5.9556941 5.0812246 2.2161444 NA 10.7458637 8.5737063 7.6872490 7.6231184 7.6448138 10.2075910 10.6044791 2.8011173 9.8625844 -1.5911795 7.9881154 12.4798426 7.9862283 6.7707432 NA -0.5911795 8.1553136 5.7397158 4.7307269 1.9937468 5.5986243 5.8852620 3.3629888 10.3156900 2.1092268 9.4936077 10.4042132 9.8340153 5.3629958 10.1938431 12.3590818 7.3542432 3.5787214 6.4144231 11.3049425 1.9937468 NA 0.4088205 2.2161444 13.387747 5.067010 7.882505 12.306456 10.410911 10.926961 12.822361 12.396774 9.415834 10.127760 13.322390 10.360448 9.100543 9.645411 NA 7.514708 11.480262 10.853555 12.719696 6.222580 13.641031 8.698818 6.176983 9.172842 7.666187 10.497147 5.940181 8.683760 10.563617 5.216156 2.578721 10.706862 6.761946 6.164020 11.006852 10.303617 10.958343 8.544509 9.284549 11.465945 4.900654 10.719600 9.915603 10.523518 10.165356 11.461367 9.372418 10.602633 10.716285 9.171181 NA 9.539511 6.241690 12.939510 6.357167 10.109673 6.095300 10.682304 10.394286 7.228978 13.536915 10.958343 10.751152 12.185746 10.796009 2.656725 NA 9.983393 10.278779 9.439466 TCGA-E2-A14R 62 0 NA 1174 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.809058e-06 4.855162e-07 7.36842105263158 21.0526315789474 9.47368421052632 28.4210526315789 33.6842105263158 9.550251 8.406557 11.002525 8.103994 9.071163 7.609885 9.029994 10.858169 11.871826 13.694257 11.174956 10.186924 4.656536 12.165914 2.334597 9.829372 8.252386 8.254554 10.862795 5.197103 NA 7.471366 9.429764 9.598094 11.000912 5.519032 2.575627 12.250641 11.337422 NA 8.032522 5.745541 NA 6.701724 9.099177 10.444557 8.830825 9.747081 10.606495 10.273385 3.267491 12.159421 14.884632 6.750895 9.334607 10.133742 10.027460 2.875171 NA 9.217250 10.170371 NA 10.127250 4.897545 6.695355 4.962637 8.106397 11.996547 9.889894 10.963301 12.323292 5.250215 11.040711 10.854601 11.283771 10.338700 2.575627 11.967933 9.629228 NA 9.853171 8.839517 2.845109 4.004456 11.771319 10.975838 10.895461 10.327417 -0.124849 7.708066 11.645840 10.725362 8.970573 9.835178 1.677200 0.821960 1.963800 0.997380 0.492680 -0.696220 0.000000 2.936500 -0.029175 -0.029175 3.253200 0.897880 -0.027945 -0.572990 -0.531950 1.209200 1.918200 -0.047395 1.239600 -0.564250 -0.526140 -0.488380 -0.484700 0.507410 0.936300 0.936300 -0.102760 0.154870 0.147120 -0.118870 -0.557770 -0.535810 -1.203900 -1.141100 -0.656400 -0.656400 -0.579600 0.322050 0.481650 0.560630 -0.543400 1.895200 -0.027808 0.949970 -0.588140 -0.865660 -0.555670 -0.555670 -0.535710 -0.531950 0.059080 0.948540 -0.570810 -0.030267 -0.555130 -0.612010 -0.564650 -0.564650 -0.587460 0.717350 -0.488380 -0.484700 -1.070100 -0.280010 -0.102760 -0.625740 0.526250 -0.536320 2.411600 0.338 0.000 -0.532 -0.532 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 0.152 0.563 -0.507 0.000 0.936 0.374 0.747 0.747 -0.451 0.143 0.588 -0.541 -0.558 -0.558 -0.578 -0.578 -0.575 -0.575 0.000 0.000 0.000 0.000 0.565 0.397 0.000 0.309 -0.553 -0.553 0.000 0.000 0.338 0.000 -0.532 -0.532 0.000 0.000 0.000 -0.565 0.000 0.000 0.000 0.152 0.563 -0.507 0.000 0.936 0.374 0.747 0.747 -0.451 0.143 0.588 -0.541 -0.558 -0.558 -0.578 -0.578 -0.575 -0.575 0.000 0.000 0.000 0.000 0.565 0.397 0.000 0.309 -0.553 -0.553 0.000 0.000 7.986311 NA 7.636727 10.674862 12.177815 6.141868 10.254554 8.662344 8.506862 NA 12.840689 10.965103 8.057570 NA 3.460140 9.167497 4.941266 11.368531 10.626720 10.924343 10.169796 NA 9.684140 10.083410 7.467632 1.197111 NA NA 9.657355 -0.124849 3.782063 7.704898 3.829373 10.385287 9.923662 1.875190 9.623369 -1.124692 6.422070 13.364835 8.320190 7.511800 NA -1.124692 6.788064 3.782063 4.232730 NA 6.946638 1.467332 2.782073 11.562333 5.250215 8.597983 10.563863 9.707274 5.669591 9.088280 13.530986 8.120728 6.241497 4.045102 10.964295 1.197111 7.919570 NA 5.504531 9.0932424 9.2513011 9.1846520 12.1659145 11.1135804 11.3040592 5.1971026 10.2829744 9.5136115 11.3178600 13.4881017 10.8563861 9.2172503 8.9652879 0.4601659 8.4825059 11.3712804 9.440278 12.100232 5.840959 14.565309 9.248041 6.250215 8.641705 4.575615 9.048141 6.589420 4.962637 11.174956 10.699737 -1.124692 9.293028 7.981084 10.400481 10.839877 10.423034 10.483430 7.843843 9.754759 7.165194 8.328446 10.196179 8.830825 9.782066 9.950655 11.574097 10.367530 11.013767 10.250215 8.146638 NA 9.180417 7.322259 10.170371 9.024923 10.127250 4.267491 10.782885 8.106397 8.074848 15.442181 11.188626 11.372029 12.629750 10.818789 2.782073 8.072392 10.954660 9.117159 8.500884 TCGA-E2-A14S 65 0 NA 1009 breast stage i t1c n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 NA 2 3 1 1 3 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 2.427581e-07 46.4285714285714 3.57142857142857 3.57142857142857 21.4285714285714 25 10.5643499 10.4187445 11.7157758 8.6043342 8.5299092 8.7715700 10.4118534 9.3805976 8.8494104 13.0588902 11.9185271 10.3152751 1.6351043 12.6812605 3.4006199 10.1707557 6.3630116 8.8610218 11.3002497 13.4544722 3.4424526 14.4225247 6.0136029 9.1531545 11.3014930 7.2731652 NA 10.2893695 9.3068095 1.1205510 7.5846266 7.4603682 -1.6868703 4.2200513 9.3011379 10.1128497 9.7888968 11.2455627 9.8667927 10.9644394 -1.6868703 11.9506939 14.6708356 8.7259027 10.1613951 10.6146595 11.2117648 3.8367220 NA 8.4730348 11.9891204 0.8980922 10.6737362 7.1711448 6.7684900 4.5226145 10.8313247 12.2141245 10.9608466 10.8015056 12.5934267 8.1043262 10.6654827 10.3229919 11.1927466 11.0724274 4.1460523 11.8358675 12.3865518 -1.6868703 10.1444706 10.2234314 5.8501493 6.1333416 9.6020294 10.1193101 9.9493347 11.0640797 3.2200513 7.5079199 12.2045674 10.9065545 10.1781233 8.9633175 -0.0078040 -0.0073339 0.0038854 -0.0254140 0.6625300 0.7432800 -0.0106460 -0.8269200 -0.8225200 2.2442000 3.3284000 0.0101460 0.0101460 -0.0012473 2.8950000 2.1817000 0.0188030 -0.0110480 -0.0262290 0.0126550 0.0319990 0.0475520 0.0475520 0.0475520 0.0692390 0.0692390 0.0692390 3.6569000 0.0000000 -0.0078040 -0.0128510 0.0038854 0.7150900 0.6421300 0.7178300 0.7178300 -0.0106460 -0.8269200 -0.0253460 -0.0152330 0.0031910 -0.8620200 -0.0080244 -0.0080244 -0.0080244 0.0476940 0.0101460 0.0181030 -0.0012473 -0.0012473 -0.8191700 0.7756000 0.0188030 -0.0110480 0.0225850 -0.0262290 0.0126550 0.0126550 0.0284810 -0.7902300 -0.7781300 0.0475520 0.0061090 0.0692390 0.0692390 0.0181030 0.0146090 0.8479000 0.8341200 0.000 0.000 0.000 -0.783 0.000 0.000 0.000 0.000 0.000 0.000 -0.777 -0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.779 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.642 0.718 0.718 0.000 0.000 0.000 0.000 -0.822 3.328 0.000 0.000 0.106 0.106 0.000 0.000 0.000 -0.783 0.000 0.000 0.000 0.000 0.000 0.000 -0.777 -0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.779 0.000 0.000 0.000 0.000 0.000 0.000 0.642 0.642 0.718 0.718 0.000 0.000 0.000 0.000 -0.822 3.328 0.000 0.000 0.106 0.106 8.8249161 2.9570231 4.6169458 10.6364996 11.1261428 7.9607839 11.3726768 9.1029985 8.6459495 NA 11.5567836 11.7522917 3.8050138 2.2200513 1.1205510 8.1140635 4.8050190 9.3785795 11.3633521 10.1261428 9.4749251 0.3131297 8.4177622 9.4546318 6.6169443 4.4830870 -1.6868703 NA 10.4190719 8.4450202 6.0342619 10.0858903 5.9642161 11.2758949 10.0871267 6.4830886 8.5776059 NA 7.5869591 13.2008600 10.1535479 6.9425204 0.8980922 7.5515683 8.9102847 5.9056205 4.2904465 1.8981309 5.0136052 6.7976239 3.2200513 10.4815221 NA 7.4603682 10.3524252 9.8711056 5.7310148 9.8777892 11.6257627 8.9223421 2.6350811 3.6350927 12.8194709 1.7726036 NA -0.1019078 0.6350578 14.789758 5.379254 9.098616 12.681261 10.175413 10.478384 13.454472 12.962532 10.352723 10.042359 12.242977 10.896011 8.473035 9.052944 2.013605 7.276059 11.972379 10.694706 11.799370 7.726791 13.717407 8.656349 5.813009 9.076376 9.155514 10.059787 6.898126 4.852324 11.918527 5.999664 NA 10.812262 6.621502 7.742821 8.500515 10.518040 10.463228 10.132544 9.397972 11.552016 5.589287 12.358284 9.788897 10.531121 10.296513 11.896716 9.204947 10.422668 10.491206 7.790922 -1.686870 8.173288 6.171145 11.989120 4.522614 10.673736 4.635093 11.074650 10.831325 7.041084 14.225023 10.522617 9.860540 11.800878 10.095752 -1.686870 NA 10.502061 10.209874 10.174250 TCGA-E2-A14T 52 0 NA 2311 breast stage iia t2 n0 m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 1 NA 4 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.080784e-07 36 16 4 28 16 10.5978752 10.2438581 12.1996309 9.4630549 9.6545172 9.0761173 10.6170040 10.4663893 9.2187047 14.9190176 10.9687263 11.0664452 3.3321064 13.2328462 3.6772376 9.4247160 5.3800367 8.5405008 10.0091071 13.0868538 2.3705828 14.4547199 0.1226065 9.6043066 11.9681384 8.9736164 0.9300182 7.8908327 9.2337841 2.7665104 6.5572768 6.1505536 NA 3.0768498 9.0377808 10.0742974 9.5754044 8.8300074 9.2147448 11.4261438 -0.8772610 10.7190711 14.6746419 8.8317838 11.5815676 10.9642127 11.4387885 3.8775381 5.8368936 8.4998590 10.1762349 -0.8772610 10.5476019 4.6925053 5.1779297 5.7151054 9.6925039 11.8518442 10.2704892 11.3044218 12.6599881 8.1296756 11.1357966 10.7153483 10.6134992 11.1818238 4.7808612 12.1203571 11.3573161 -0.8772610 10.3873842 8.5593599 5.7662162 4.2723965 10.5208576 10.5031095 9.8390392 9.7941894 2.3705828 7.2311732 10.7741486 9.9495940 10.7181390 9.5681805 0.5176900 0.5176900 0.2367400 -0.1695500 -0.0102320 0.6106300 0.0000000 0.4626300 0.2632600 -0.2567300 0.9878300 -0.4148200 -0.4148200 -0.0171160 -0.0171160 -0.0171160 0.0130740 1.7641000 0.3619900 -0.0076101 0.6226000 -0.4181600 0.4252100 1.7056000 -0.0015243 0.0077783 0.0068044 0.4031100 0.0172640 0.5176900 0.0061090 0.2219100 -0.0102320 -0.0102320 0.5063700 0.3953600 0.0000000 -0.4152700 -0.4237500 0.4230100 0.4230100 -0.8561200 -0.4390800 -0.4073800 0.0134920 0.0134920 -0.4148200 -0.4148200 -0.0171160 -0.0171160 -0.0183530 -0.0183530 0.0076698 -0.2809600 -0.2809600 -0.4586400 -0.4137700 -0.4243400 -0.0228810 0.1887400 -0.4219100 0.4252100 0.3204400 0.0150280 0.0077783 0.4031100 0.4474800 -0.3697400 -0.3697400 -0.415 -0.415 0.000 0.000 0.000 0.000 0.361 -0.424 0.000 0.000 0.000 -0.418 0.313 0.335 0.335 0.000 0.000 0.000 0.500 0.403 0.403 0.000 -0.370 0.000 0.000 0.052 -0.170 0.000 0.000 0.506 0.395 0.000 0.000 0.423 0.423 -0.283 0.520 -0.400 0.000 0.000 0.000 -0.415 -0.415 0.000 0.000 0.000 0.000 0.361 -0.424 0.000 0.000 0.000 -0.418 0.313 0.335 0.335 0.000 0.000 0.000 0.500 0.403 0.403 0.000 -0.370 0.000 0.000 0.052 -0.170 0.000 0.000 0.506 0.395 0.000 0.000 0.423 0.423 -0.283 0.520 -0.400 0.000 0.000 0.000 7.9023679 -0.8772610 4.5983831 9.5938156 12.7950737 6.7345579 11.0655294 8.5546368 9.7263813 -0.2924752 11.9619506 11.7357587 7.4195642 6.1724975 2.5820742 7.5383899 4.7225589 9.6486585 11.6615648 11.0375940 8.8691626 0.7076131 8.3610533 10.5585790 5.7373569 8.2376918 7.4513232 NA 9.1020736 7.1588217 5.3321028 7.4955137 6.9681380 9.7551483 10.4457031 2.0295236 8.5614403 NA 5.9170641 11.9849951 8.7754934 7.3964438 -1.8772610 5.9555383 9.0812011 -1.8772610 4.3894360 -0.8772610 3.8230870 4.8378575 -0.2924752 9.6825034 0.7076131 7.3025576 10.4010979 9.5229942 3.3321064 8.0144323 11.6711091 8.3693888 4.0768412 3.1670367 11.7836470 11.1118654 NA 3.0295412 0.7076131 14.433777 6.700078 9.321093 13.232846 10.640524 10.744013 13.086854 14.997414 8.838610 10.322627 12.582976 11.166701 8.499859 8.423001 1.582074 8.268580 11.783981 11.0276592 12.1951160 7.5882147 14.5020254 8.5031094 4.4080529 8.5851507 9.4982309 10.7226936 3.9555360 9.6398256 10.9687263 7.2363902 NA 9.7705564 5.3025567 8.0434774 9.5368051 9.6579238 10.4172691 8.5468146 9.9134041 9.8582044 3.8775381 11.5340866 9.5754044 10.2853544 10.1155867 11.1192984 8.9064652 11.0407662 10.6479244 9.6417931 -0.8772610 9.6341638 6.8974353 10.1762349 5.6145008 10.5476019 5.5489144 11.2910071 9.6925039 7.0022311 13.2254853 10.5389181 9.9219300 12.5517281 9.8492923 0.1226065 NA 10.9812122 9.4708232 9.6383483 TCGA-E2-A14U 74 0 NA 1318 breast stage i t1c n0 m0 female 2008 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 5 NA NA 3 3 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 1.387189e-07 7.69230769230769 30.7692307692308 0 46.1538461538462 15.3846153846154 10.0820309 9.0552361 11.6700320 8.7442533 8.5102815 9.1751920 11.3520998 9.3773331 11.0330926 13.6061337 11.2812459 10.5786141 4.2721875 13.8098730 2.9618455 10.2568331 6.9618444 8.9744134 9.9992270 12.3639189 4.7273814 13.2070172 7.3320088 9.9766151 10.8823763 5.0728775 NA 8.0425026 8.7484411 3.0184205 8.4369297 7.0149567 -0.6820014 2.7774302 9.9418701 9.2135638 9.7557407 11.4724903 9.9455226 11.2177232 9.1720777 12.2771755 14.5893969 7.5884943 10.1786876 11.3790222 10.7244594 5.8802300 3.2721875 8.3472759 12.1120998 -0.6820014 10.5286600 4.2952675 4.4879108 4.1253453 9.6650562 11.6249047 10.5821379 13.0787605 12.6205561 8.5298768 10.6856763 10.6953619 10.8921090 10.9441539 4.7937242 11.2502034 11.2966990 2.2248738 10.3070283 9.1373693 4.7993827 3.9618455 10.9753070 9.9034207 10.4584989 9.3452034 4.9029515 9.9708335 13.7172665 13.2062562 10.1245383 10.2260058 0.00527490 0.00527490 -0.00166290 -0.01050800 -0.00124730 -0.00041585 0.00221930 0.00221930 -0.16268000 0.22503000 0.23349000 -0.00595220 -0.00595220 -0.00857660 -0.00857660 -0.00857660 0.00041593 0.00041593 -0.00138580 0.00736090 -0.01174900 0.00805670 0.00805670 0.00805670 0.00471900 0.00471900 0.00471900 -0.00360110 0.00527490 0.00527490 0.00000000 -0.00166290 -0.00124730 -0.00124730 -0.00041585 -0.00041585 0.00221930 0.00221930 0.00221930 -0.00249380 -0.00249380 -0.16268000 0.00180300 0.00180300 0.00180300 0.00694350 -0.00595220 -0.00595220 -0.00857660 -0.00857660 -0.00857660 -0.00857660 0.00041593 0.00041593 0.00041593 -0.00138580 0.00736090 0.00736090 -0.01174900 -0.16001000 0.00805670 0.00805670 0.00360760 0.00471900 0.00471900 -0.00360110 -0.00137360 -0.01312700 -0.01312700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.073 -0.160 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.062 0.225 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.073 -0.160 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.062 0.225 0.000 0.000 0.000 0.000 8.8610205 2.4054478 5.5659170 11.3141090 11.8034406 7.7400742 11.5960024 8.8882333 9.1886153 2.8415505 11.8711379 10.4843589 4.2487246 3.7103050 4.2006299 8.1349720 3.6755450 9.7426798 11.3943032 10.4064456 9.3486558 4.2487246 7.7379490 10.9784303 5.3066742 5.6033919 0.6398804 NA 10.8735364 5.8878445 7.0009836 7.9048285 9.1492960 11.7067284 9.9609429 4.0184294 8.8118441 -0.6820014 8.4891656 13.4469496 9.5736074 6.2487265 0.3179986 4.8098414 7.8058283 2.1253535 3.7103050 5.6399180 3.3623857 6.5670069 3.4879108 10.0890654 4.1759716 9.5292685 10.8093407 9.3907911 4.1508764 10.5000725 10.9901929 7.1883534 1.1253205 2.4879236 11.2194212 0.3179986 0.3179986 1.4878979 1.3179986 12.165272 4.045906 8.670032 13.809873 10.283412 10.012346 12.363919 12.622269 9.081085 10.336884 13.278760 11.968255 8.347276 8.233868 2.018421 8.037377 11.194122 11.1107789 12.2918653 7.6511443 13.7216624 8.9455226 6.1253432 9.4690052 7.0594559 10.7993768 6.0390879 8.3486556 11.2812459 5.6578372 0.6398804 10.4153624 9.5617576 5.8236424 11.6418878 10.2844940 10.2305037 8.1650462 9.4891654 11.0465469 3.4879108 11.3912867 9.7557407 10.5990493 10.2830514 11.5112060 9.9400405 9.7405790 10.4463052 8.4715407 NA 9.7614191 6.1308073 12.1120998 5.8018053 10.5286600 4.7103050 11.3719145 9.6650562 6.9509839 14.3745628 10.0836891 10.3807094 12.6062779 10.9493930 -0.6820014 -0.6820014 10.2048284 9.5563934 9.9979085 TCGA-E2-A14V 53 0 NA 1042 breast stage iib t2 n1 m0 female 2008 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 1 2 1 NA 4 3 2 2 2 5 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.803346e-06 4.508365e-07 20.8955223880597 34.3283582089552 4.47761194029851 23.8805970149254 16.4179104477612 10.0332550 10.1625251 11.2202732 9.3487246 7.9027236 9.1487671 9.6089602 10.1407861 10.1191420 14.4008997 11.5562447 10.7712187 1.9838601 16.2042575 4.1537891 9.4555356 5.7739383 9.4170981 8.9361161 12.9607824 2.4863540 13.3416872 3.9534888 9.5041516 11.0915133 5.9611394 0.3988976 9.9042131 11.1137872 2.0993289 7.5100338 7.5562447 -1.6012119 3.0427494 10.0373338 10.9847992 9.7788177 11.1845546 9.2584325 11.2836407 5.4649884 9.7646734 14.6129133 8.0345613 8.9678041 11.2690699 11.3729538 4.0713251 4.8251649 8.8766560 11.4833740 -1.6012119 11.2367228 4.4212637 4.8907531 4.2815425 10.3458041 12.2884968 9.8705729 11.9207436 12.6422206 8.5461027 11.0490520 10.3801083 11.1073351 10.6909318 4.9380552 12.1648054 11.4989030 -0.6009930 10.2337638 9.3325884 3.1009945 3.2062525 11.0407238 10.3693632 9.7314938 10.0468059 0.9838965 9.3882922 12.2587237 12.9372686 9.8114677 8.8675218 -0.227970 0.784120 -0.348470 0.105410 -0.057385 0.035383 0.021884 3.656900 -0.370080 -0.401410 0.354630 1.335000 0.024969 0.298830 3.108500 0.016985 0.063223 0.461780 0.044258 0.842180 -0.126810 -0.365440 3.656900 3.656900 -0.038850 -0.038850 -0.038850 1.028300 -0.343540 -0.343540 -0.089302 -0.348470 -0.057385 -0.082535 0.035383 0.035383 0.011400 -0.060614 -0.356310 0.382210 0.242640 0.364770 -0.013953 -0.013953 -0.013953 -0.013953 0.028622 0.028622 0.298830 -0.423960 -0.362380 -0.362380 0.063223 0.104240 0.104240 -0.308740 -0.278100 -0.278100 -0.126810 -0.373240 -0.395080 -0.388840 -0.478180 -0.038850 -0.038850 0.701200 0.013632 -0.226500 -0.226500 0.000 0.000 0.299 -0.316 0.000 0.000 0.000 0.000 -0.127 0.008 -0.347 -0.352 -0.352 -0.305 0.000 0.000 0.000 -0.344 0.707 0.701 0.701 0.000 -0.226 0.000 0.000 -0.348 0.000 0.000 0.000 0.000 0.000 -0.335 -0.335 0.382 0.243 -0.370 -0.015 0.000 0.000 0.132 0.132 0.000 0.000 0.299 -0.316 0.000 0.000 0.000 0.000 -0.127 0.008 -0.347 -0.352 -0.352 -0.305 0.000 0.000 0.000 -0.344 0.707 0.701 0.701 0.000 -0.226 0.000 0.000 -0.348 0.000 0.000 0.000 0.000 0.000 -0.335 -0.335 0.382 0.243 -0.370 -0.015 0.000 0.000 0.132 0.132 8.5473742 -1.6012119 4.1268160 10.0624559 12.9896603 5.3458612 11.0779380 7.6741146 8.1077747 1.9838601 11.8930033 12.0039443 3.0427494 2.5688347 3.1537891 8.2677202 5.6656855 9.3804652 11.0515187 11.1475100 9.3020265 2.6468308 8.0391428 10.0236932 4.7387462 4.9224595 5.5887236 NA 11.1466712 6.3646827 5.4212671 8.3472652 6.5230193 10.2434545 10.7083742 2.5688347 8.4528236 NA 5.6083509 12.1180727 7.5537161 6.8209627 -1.6012119 6.3761775 8.7454115 5.0427538 2.3988976 NA 3.3057955 5.7050517 1.5688104 11.0156763 2.4863540 10.4680118 10.2746471 10.4706953 4.4649884 8.4309434 11.5062784 7.1504419 2.2062681 3.3530974 10.9004862 1.8583391 NA 2.8583391 0.3988976 13.977452 7.358900 8.492976 16.204258 9.934231 11.046131 12.960782 12.015562 9.119142 11.100854 12.559872 11.206655 8.876656 9.807758 2.486354 11.513291 12.529951 11.061344 11.860377 6.311786 14.327808 8.981980 4.608354 8.668024 9.447385 10.477479 4.568823 4.013605 11.556245 5.206252 2.922464 10.175742 5.914598 8.769498 11.079697 10.169975 10.802442 6.922460 9.276182 10.469690 4.665683 10.857484 9.778818 9.958275 9.857304 10.695527 9.472370 11.279055 10.769313 9.448746 -0.600993 8.509590 7.725844 11.483374 4.180259 11.236723 6.812525 10.426113 10.345804 7.379038 13.621089 10.017742 10.108412 12.295230 11.142470 NA 2.720826 10.304661 9.610178 9.226240 TCGA-E2-A14W 78 0 NA 974 breast stage iia t2 n0 m0 male 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 NA 2 2 1 1 2 9 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.838026e-06 4.855162e-07 5.88235294117647 25 4.41176470588235 35.2941176470588 29.4117647058824 10.12530265 9.92867337 11.52798645 6.85145922 10.49555437 8.95676963 10.24292078 9.88693662 8.99113745 13.19470435 10.82655151 10.33570923 -0.06145073 12.90795592 3.33088820 9.20886471 4.55328062 8.68340311 7.05231155 13.40260456 3.33088820 14.00293326 6.32227430 9.60123780 11.33784732 5.06785380 0.93854927 7.28729775 11.29557151 3.74592570 6.91584951 5.63900926 NA 0.93854927 8.56062134 10.28619075 9.65966862 10.03000481 9.20652650 10.61011046 3.10849100 11.50557479 13.11450874 6.15802795 10.21003240 9.78013372 11.00969652 3.84545994 6.25145211 8.13332617 10.21411193 1.26050748 11.28175510 4.82121018 3.46213087 4.06785380 9.74511899 11.83168129 10.69804150 11.63640575 12.51941681 9.26162413 11.22049943 10.56336485 11.07235378 10.60523726 2.26050748 12.36706042 11.24605483 2.10849100 10.12839394 8.97474296 2.06949595 2.10849100 10.52447080 10.03066576 11.57632632 10.40617492 -1.06130019 8.58422782 11.38306671 10.30489156 9.81891813 8.98705619 -0.00026402 -0.10892000 0.03807800 0.01601900 -0.02464800 0.06724500 -0.00012541 -0.06768900 0.03751300 0.03751300 0.11051000 0.04827500 0.03018300 0.02203700 0.04941100 0.04941100 -0.00497130 2.19800000 0.02203700 -0.00732070 0.69374000 -0.64235000 0.65536000 1.29870000 -0.00497130 0.08422300 0.03807800 0.06968300 0.11596000 -0.00026402 0.06767500 -0.65444000 0.05766700 0.06152200 -0.00711740 -0.00711740 -0.68687000 -0.00012541 0.59496000 0.36069000 -0.36951000 -0.65640000 -0.67688000 -0.67472000 -0.67472000 -0.65173000 0.03018300 -0.63877000 0.02203700 0.04941100 0.04941100 -0.64009000 -0.00497130 0.01797700 0.01797700 -0.67664000 -0.66482000 -0.64761000 -0.65844000 -0.63433000 -0.64235000 0.65536000 0.68256000 -0.00497130 0.02652700 0.06968300 -0.03204100 0.11537000 -0.64339000 0.000 0.000 0.000 0.000 2.198 2.198 -0.646 0.000 0.000 -0.634 -0.634 0.656 1.299 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.345 0.000 -0.635 0.000 -0.675 -0.675 0.000 0.000 0.000 0.000 0.000 0.000 2.198 2.198 -0.646 0.000 0.000 -0.634 -0.634 0.656 1.299 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.643 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.345 0.000 -0.635 0.000 -0.675 -0.675 0.000 0.000 9.544975 1.938587 6.545900 9.741893 12.602794 7.441600 11.288403 5.137262 9.187481 NA 11.613424 10.734203 4.462131 4.148023 2.639001 8.047094 2.523537 8.176974 11.516706 10.689695 9.012711 2.260507 8.358529 9.599457 3.397995 8.448344 4.026030 NA 10.606568 7.446364 7.152888 8.128394 5.223971 9.090854 10.031327 NA 7.848463 2.260507 5.892765 11.683613 7.969236 5.278420 NA 6.618049 8.291716 NA 0.523562 NA 1.260507 5.128788 NA 10.695126 0.523562 2.745926 10.939626 10.262750 3.397995 9.561536 11.172189 4.666490 2.397995 3.938568 10.299417 2.639001 NA 2.845470 -1.061300 14.001621 6.881083 9.775409 12.907956 9.921563 9.749944 13.402605 13.222020 9.347632 9.927964 11.993343 10.889125 8.133326 8.705098 NA 8.479666 11.633580 9.81585350 11.46360075 5.06785380 13.47335314 9.36692955 2.74592570 9.03132654 8.83187091 8.49388706 3.98296620 0.93854927 10.82655151 7.88401296 2.93856809 9.47189912 5.08831548 6.37261436 10.84433245 9.32227362 10.36221058 9.05491331 9.42942034 9.01271085 -1.06130019 11.74638516 9.65966862 10.88401326 10.97954402 11.98586374 8.41430300 10.77501432 9.33517416 7.78091962 4.26049995 8.74328135 7.27221639 10.21411193 -0.06145073 11.28175510 7.18174363 10.03198703 9.74511899 6.97748830 13.95633475 11.18174338 10.95468125 12.44574462 10.56382165 NA 0.52356196 10.64160780 9.01805409 8.37943859 TCGA-E2-A14X 55 0 NA 972 breast stage iiia t2 n2 m0 female 2009 NA yes infiltrating ductal carcinoma 5 black or african american not hispanic or latino 3 3 4 NA 5 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4.855162e-07 2.774378e-07 34.7826086956522 17.3913043478261 13.0434782608696 21.7391304347826 13.0434782608696 10.9053817 10.1284982 11.8932189 9.6579235 7.9286652 8.4624732 10.4299474 10.7488439 12.5010701 13.4806411 11.2856400 11.0026747 3.5525123 11.9840363 2.9979246 7.9123127 6.4030683 9.6399793 9.1387574 6.9809210 -1.0020212 8.5744119 8.0814067 9.0581506 11.4807356 6.7528155 0.8052925 8.9809213 11.2282484 3.0423292 9.8725248 6.4115551 -2.0023102 6.9197691 9.9408087 10.0039030 9.3642498 10.6089524 10.4703646 11.8558114 1.4573842 11.6012062 15.3726020 8.3215566 9.3913128 10.9769955 10.3507987 3.7528128 -1.0020212 9.3576771 10.9316183 1.4573842 10.4160438 5.2267474 7.4634941 4.9048164 8.7988275 11.7870537 10.0098537 11.3850025 12.4651510 7.2387190 11.5650518 10.6195881 11.0183867 11.8530881 4.8434161 11.6295594 9.7817444 -1.0020212 10.2061620 11.0979328 3.9074579 5.5903834 9.1310698 11.0440285 9.8256672 11.1532202 5.5448223 9.3045590 13.1651497 11.4438477 9.9586536 9.3062666 0.780250 0.937520 -0.020412 -0.051991 -0.052126 -0.051316 0.993770 0.935490 -0.646590 1.850900 2.358700 -0.044957 -0.065964 -0.377690 0.327850 0.327850 -0.042773 -0.042773 0.641580 0.051530 0.018383 -0.332600 -0.332600 -0.332600 0.324790 0.324790 0.324790 0.458710 0.322700 0.780250 -0.349850 -0.020412 -0.052126 -0.052126 -0.071073 -0.071073 0.993770 0.935490 0.973370 -0.030677 -0.022469 -0.649210 0.255700 0.255700 -0.360450 -0.353270 -0.065964 -0.065964 -0.377690 0.327850 0.289610 0.289610 -0.042773 -0.023566 -0.023566 -0.701090 0.051530 0.054091 -0.011455 0.243110 -0.332600 -0.332600 0.279160 0.324790 0.324790 0.134330 1.080800 0.735680 0.735680 0.000 0.000 -0.327 -0.037 0.000 0.000 0.600 0.000 0.000 0.243 0.243 -0.333 -0.333 0.279 0.279 0.325 0.325 0.780 0.938 0.134 0.459 1.193 0.736 0.000 -0.350 0.000 0.000 0.000 0.000 0.000 0.000 0.935 0.935 0.000 0.000 -0.641 3.657 -0.105 -0.360 0.179 0.179 0.000 0.000 -0.327 -0.037 0.000 0.000 0.600 0.000 0.000 0.243 0.243 -0.333 -0.333 0.279 0.279 0.325 0.325 0.780 0.938 0.134 0.459 1.193 0.736 0.000 -0.350 0.000 0.000 0.000 0.000 0.000 0.000 0.935 0.935 0.000 0.000 -0.641 3.657 -0.105 -0.360 0.179 0.179 7.558261 4.552518 6.949213 10.446302 10.891987 6.671237 11.588164 9.939173 8.108189 0.582845 12.957613 10.966726 3.245861 NA 4.567783 9.346656 3.424197 10.402537 11.732849 11.074409 9.532230 NA 8.890470 10.368615 8.677408 4.670353 1.582893 0.582845 11.390379 4.818104 6.127210 8.524427 8.116868 9.611339 10.994225 3.319849 9.014039 -2.002310 7.137479 13.272124 8.027215 6.403068 -0.417155 5.684429 7.569680 4.537085 3.952129 -2.002310 7.761140 4.302802 4.818104 10.922369 6.656139 10.154327 11.374189 10.211032 6.014737 10.002499 12.146960 7.979495 4.698369 4.627286 10.410762 -0.417155 10.291974 -0.417155 4.582887 9.054159 8.242291 8.722441 11.984036 10.838312 11.748530 6.980921 11.303134 9.320909 10.969112 13.301387 11.838902 9.357677 9.339447 1.997943 7.155275 11.575474 10.127211 11.614247 7.525405 15.124551 9.580065 7.287947 9.369704 8.748635 9.424035 7.582890 7.838705 11.285640 9.277538 3.283329 10.504731 9.584767 9.660850 12.669413 11.177681 10.519283 9.195759 8.241102 9.360967 9.757816 11.395359 9.364250 10.287946 9.857462 13.242217 11.374324 11.322671 10.098261 9.728398 7.278698 9.660048 9.336385 10.931618 10.472141 10.416044 5.698369 10.733907 8.798828 7.979552 14.840708 10.659260 10.595282 12.074326 10.680922 6.359871 5.345506 11.440353 10.423144 9.091345 TCGA-E2-A14Y 35 0 NA 2109 breast stage iia t2 n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 5 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6.935946e-07 2.774378e-07 10.7142857142857 39.2857142857143 7.14285714285714 25 17.8571428571429 9.6195957 9.8305702 12.0731904 8.5881888 8.7370134 8.8238442 10.2820496 10.4093684 10.6215361 12.2759027 10.3608268 10.2573030 2.0823620 16.6989692 3.6673358 9.2942655 3.0823790 8.3815853 7.0307444 9.0116357 NA 9.4885823 5.4399289 9.4843235 11.7662492 7.0423795 1.0823620 7.3631483 12.3535485 1.6673472 7.6331238 8.7548027 -0.9175699 4.4399289 8.9231551 10.8917435 8.9952666 10.0589415 8.7226221 10.9500422 NA 9.4399293 14.5797302 6.6928121 9.1671858 10.1625287 9.7512624 3.6673358 NA 8.8604545 10.8905371 0.0824301 11.5916574 2.5418122 6.1591932 4.3677764 7.8472491 12.1877948 9.4020493 12.1741433 12.4570093 4.5742287 11.3983759 10.4305522 11.0300143 11.2703479 4.1480393 11.6892451 10.1685136 NA 9.9025563 9.4388293 0.0824301 2.9892662 10.7675641 9.9081311 10.3596647 9.4497920 0.0824301 10.2346621 14.1895535 11.1797511 9.8077436 9.3075847 0.6847700 0.5936000 0.0196430 0.0051359 -0.0178030 1.4214000 0.0253900 -0.0022863 -0.7757500 -0.7757500 2.6651000 -0.0151910 -0.1069700 -0.0734760 -0.0734760 -0.0734760 -0.0037395 -0.0037395 0.3225300 -0.0341810 0.0298880 3.3536000 3.6569000 0.1506900 0.1074500 0.1074500 0.1074500 0.8390300 0.0232860 -0.6729700 -0.1340600 0.0051359 -0.0121620 -0.0483640 -0.0391220 -0.0391220 0.0253900 -0.0022863 -0.0022863 0.0242680 0.0242680 -0.8049500 0.0269350 0.0269350 0.0269350 0.0335490 -0.1069700 -0.1069700 -0.0734760 -0.0734760 -0.0734760 -0.1093300 -0.0037395 -0.0626290 -0.0626290 0.3064900 0.0000000 0.0000000 0.0298880 -0.7048700 -0.6551200 -0.6518700 0.0097276 -0.6749000 0.1074500 0.0269350 -0.7743100 0.0237060 -0.0359930 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 -0.252 -0.705 -0.645 -0.645 0.000 0.000 0.107 0.107 0.000 0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.289 0.000 0.000 0.000 0.000 0.000 0.585 1.344 0.000 0.000 -0.028 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.306 0.000 0.000 -0.252 -0.705 -0.645 -0.645 0.000 0.000 0.107 0.107 0.000 0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.289 0.000 0.000 0.000 0.000 0.000 0.585 1.344 0.000 0.000 -0.028 0.521 7.8961586 0.6673018 5.9152675 10.9341263 11.6290307 4.6258725 11.4867206 8.9391763 8.1508602 0.6673018 13.9490767 11.7793405 1.4043037 NA 2.0823620 8.0963979 3.3303002 10.4009201 11.8577818 10.7789102 9.0738992 -0.9175699 8.2820496 6.7758644 5.0823790 13.2051244 7.2422490 0.6673018 9.7162807 -0.9175699 9.3792934 8.4981192 6.4043054 9.4143356 10.5881889 NA 9.3075847 3.6673358 4.6369668 13.0652818 6.7897371 12.4188839 0.0824301 3.1698448 8.4574166 6.2722024 1.6673472 NA 3.7828174 2.0841663 6.1909012 11.9067394 1.8897461 10.3219759 10.0481615 10.2428790 4.5418060 10.6258925 13.5609573 5.1484664 1.4043037 1.6673472 10.4250076 2.6673472 1.0823620 3.8372671 NA 12.820153 8.897760 8.913684 16.698969 9.728036 11.606184 9.011636 10.327336 8.560136 10.082377 13.431382 11.845382 8.860454 6.558111 NA 8.115800 10.685540 10.9975098 11.8534541 4.3303074 14.4196501 8.0481615 10.8776052 10.1206105 8.2697294 9.5214291 3.0823790 3.4043037 10.3608268 10.3741236 0.6673018 10.3153978 8.2622866 7.4061974 13.1792571 9.9356869 10.2390925 8.9450148 9.5096901 7.1698398 5.1909032 10.1297671 8.9952666 10.1545099 9.7905991 11.2135912 10.7789102 10.1335863 10.4628383 9.3267411 NA 9.2109131 11.3817799 10.8905371 6.4222280 11.5916574 5.3491636 10.9798447 7.8472491 7.1430730 13.6461098 11.0925557 11.2563667 11.9978833 10.4896451 2.6673472 NA 9.6531817 9.7862809 8.9967624 TCGA-E2-A14Z 64 1 563 NA breast stage i t1c n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 4 NA 1 2 7 4 1 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 5.548757e-07 18.1818181818182 34.5454545454545 1.81818181818182 29.0909090909091 16.3636363636364 9.9124060 9.6495059 11.2762809 8.4958011 8.1581057 8.8316410 10.3003371 9.7148615 10.2217930 12.6863867 9.8873504 10.4189682 3.0908873 12.1035819 1.8429386 9.3186897 5.9722400 8.7225395 9.4493614 13.0935508 0.8429386 13.7107659 5.6111399 9.7754221 11.4720852 4.4576665 1.6503050 12.5903835 10.9376938 2.9304157 8.5029523 7.5468597 0.4279279 4.0128815 9.6750552 9.5725771 7.9977745 11.7364474 9.6357466 10.4754972 4.9090434 11.3016192 14.3924101 7.9158394 9.3156471 10.7255993 11.5915685 4.1648828 NA 9.0633347 11.0720755 -0.1569810 10.1341270 6.2775850 7.4203847 4.8202351 9.9882517 11.6647303 10.7252172 11.8686150 12.3611176 7.6884462 10.6111407 9.2000683 10.7332206 10.9214407 4.0908873 12.2415664 11.1088643 -1.1571418 10.4488987 9.6430473 3.3671474 6.1648848 11.0891030 10.1364279 9.6414281 9.9799474 4.3665181 9.0253506 13.3494498 12.9325723 10.5995126 9.4759514 0.37528000 0.55939000 0.32398000 0.28890000 -0.01546600 0.31370000 0.32576000 0.32576000 -0.35658000 -0.35133000 1.66340000 0.00194180 0.34242000 -0.36103000 0.02904400 0.02904400 -0.25914000 -0.25914000 -0.03789800 0.17996000 0.00000000 -0.30686000 -0.15426000 -0.15426000 0.09943300 0.28961000 -0.27953000 0.05110300 -0.30451000 -0.32530000 -0.34460000 0.32398000 -0.34698000 -0.01546600 -0.04102400 -0.03857800 0.32576000 0.32576000 -0.37572000 0.34429000 0.28723000 -0.35476000 -0.36306000 -0.36624000 -0.33445000 -0.33445000 -0.37583000 0.67196000 -0.34893000 0.02904400 -0.00109190 0.00097064 -0.25914000 -0.02644100 -0.02644100 -0.03789800 -0.34228000 -0.33710000 0.00000000 -0.32147000 -1.02950000 -0.15426000 0.03411300 0.39567000 0.28961000 0.93345000 0.29867000 -0.31864000 -0.29485000 -0.347 -0.347 -0.348 0.000 -0.233 0.000 0.000 -0.337 0.000 0.089 -0.312 -0.307 -0.307 -0.341 -0.341 0.290 0.290 0.375 0.559 0.882 0.000 0.299 -0.295 -0.356 -0.356 0.324 0.324 -0.354 0.000 0.314 0.000 0.326 0.326 -0.013 -0.357 -0.355 1.596 -0.334 -0.334 0.000 0.000 -0.347 -0.347 -0.348 0.000 -0.233 0.000 0.000 -0.337 0.000 0.089 -0.312 -0.307 -0.307 -0.341 -0.341 0.290 0.290 0.375 0.559 0.882 0.000 0.299 -0.295 -0.356 -0.356 0.324 0.324 -0.354 0.000 0.314 0.000 0.326 0.326 -0.013 -0.357 -0.355 1.596 -0.334 -0.334 0.000 0.000 7.6177437 NA 6.5433953 11.0456923 11.2781056 6.9900597 10.6782172 9.0947700 9.2218906 3.4868173 12.6668211 11.5988683 1.6503050 0.8429386 4.6758442 8.4090103 4.3348114 11.5082922 11.0256610 10.3893685 8.7869361 9.2838255 8.2565842 9.9043275 7.9170975 5.5844244 1.6503050 NA 10.4118624 5.6631340 7.0327808 8.0228655 8.9501733 11.1787514 10.2807084 4.6758442 8.8541836 NA 6.7618198 12.5127272 9.2470334 7.1283584 NA 0.4279279 8.2480979 2.8429587 4.5978410 -1.1571418 7.6243159 6.2537038 4.5153845 10.7618196 -0.1569810 9.1225669 10.7862037 10.1733130 6.5708773 11.0888061 13.0766509 9.4166035 5.6243173 5.1283594 9.8880333 1.8429386 NA -1.1571418 0.4279279 11.437225 6.570877 8.914419 12.103582 10.055453 11.312089 13.093551 11.817909 9.077774 10.128936 13.043472 10.596591 9.063335 11.874485 NA 7.587790 10.832706 10.777016 11.245435 6.859765 13.831329 8.736258 7.903652 9.268172 7.453981 9.753584 8.022865 6.837310 9.887350 7.217995 -1.157142 10.375312 5.584424 7.960625 10.702879 10.419913 10.287971 8.760328 8.344793 10.073577 7.574276 12.125733 7.997775 10.151295 10.420385 10.460424 9.918435 10.708690 10.078970 8.499381 NA 9.401760 7.031743 11.072076 6.935713 10.134127 6.209278 10.796061 9.988252 7.350751 15.850268 10.353226 10.682554 12.449708 11.803320 5.584424 -0.156981 10.740045 9.797880 9.322736 TCGA-E2-A150 48 0 NA 1935 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 3 4 NA 3 1 5 5 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.179111e-06 2.774378e-07 14.2857142857143 16.6666666666667 7.14285714285714 30.952380952381 30.952380952381 10.5439190 9.3351500 11.7151905 9.6578009 7.9710296 9.1827449 9.2685523 10.3690973 11.2041852 13.2059163 10.6119041 10.0899035 -1.3050752 11.7797134 0.6949248 11.4754448 7.0872220 8.4663946 6.3022350 3.7823666 -1.3050752 11.0530067 8.4647430 9.4958049 11.0419726 4.6491038 NA 10.5190682 9.8679574 1.6949248 10.2966758 9.6285957 NA 5.1867580 9.6786112 10.4766745 9.6337494 10.4692803 10.0049496 11.4042043 4.1543402 4.0872252 14.9753858 7.8814401 9.1927569 11.2150325 10.6574396 3.9043589 NA 10.4266482 11.0756366 NA 11.1085330 4.6256446 6.8034298 7.0524572 10.5126881 11.5194660 9.4655689 11.1872590 12.6802133 8.8623231 10.7886527 10.3641400 11.3890452 11.6243483 5.3531151 12.6237934 8.9628622 -1.3050752 10.3544550 10.0791491 4.8746150 5.3814045 8.5497735 9.7427106 10.2150325 10.3633469 0.2798873 7.0655928 13.1669611 12.9708112 9.7068311 10.4901330 0.459000 0.556550 -0.346180 1.187900 -0.283410 0.036088 -0.404840 0.428050 -0.356790 -0.356790 1.262300 1.158000 0.198470 -0.336760 3.656900 -0.067056 0.715470 -0.356920 -0.386720 -0.365900 -0.067726 -0.357490 -0.357490 -0.355560 0.516990 0.547000 -0.041295 0.514420 0.349980 0.459000 0.066945 -0.755130 -0.520920 0.416970 -0.505770 -0.528900 -0.404840 0.421330 0.422170 0.087969 0.061651 -0.432350 2.887800 0.036229 0.036229 -0.505460 -0.554770 -0.553370 -0.359310 -0.067860 -0.403660 -0.526750 0.715470 -0.347670 -0.350670 -0.386720 -0.365900 0.059223 -0.505360 0.833920 -0.357490 -0.357490 -0.401410 -0.511970 -0.041295 -0.362830 0.282000 -0.236060 -0.236060 1.122 1.122 0.000 0.000 -0.243 -0.350 -0.387 -0.366 -0.436 -0.150 -0.150 -0.357 -0.357 0.026 -0.392 0.517 0.517 0.459 0.459 0.109 0.491 0.000 -0.236 0.000 0.000 -0.331 0.000 -0.283 -0.283 0.000 -0.504 0.415 0.415 0.000 0.000 -0.332 0.000 0.000 -0.495 0.000 0.000 1.122 1.122 0.000 0.000 -0.243 -0.350 -0.387 -0.366 -0.436 -0.150 -0.150 -0.357 -0.357 0.026 -0.392 0.517 0.517 0.459 0.459 0.109 0.491 0.000 -0.236 0.000 0.000 -0.331 0.000 -0.283 -0.283 0.000 -0.504 0.415 0.415 0.000 0.000 -0.332 0.000 0.000 -0.495 0.000 0.000 7.4663946 -0.3050752 4.2184635 9.8717015 10.7949102 5.3538314 11.0414187 9.5341245 8.0826425 -1.3050752 11.0314115 12.6551658 3.3387667 0.2798873 2.1543240 8.8522520 4.7392973 10.8131972 11.7433919 10.5313499 8.7228109 3.9043589 8.7757225 9.8598120 6.9333094 7.0436332 5.7823666 NA 10.8290104 0.6949248 8.2892295 9.6970167 9.6899655 9.6954474 10.4527117 4.4228250 8.8772995 4.5277960 8.2437267 12.2048037 7.9092241 7.1584289 NA 1.0168528 7.6167458 3.9428335 3.5022542 NA 5.7061327 1.0168528 5.7717219 10.8522519 3.6017916 11.5904803 11.0199293 9.8579256 7.5435276 9.1159178 13.2159533 8.0612270 2.6949025 4.0168350 10.1037654 3.7392973 -0.3050752 0.2798873 3.7823666 13.899539 6.546654 7.859812 11.779713 9.430461 10.787662 3.782367 9.673615 9.414294 11.323123 13.296850 10.950524 10.426648 8.519864 NA 7.559091 11.461848 10.327900 12.030295 3.154340 14.969355 8.923724 8.050256 9.237937 8.492567 8.909261 6.975676 4.625645 10.611904 4.782367 -1.305075 11.503668 9.296676 9.558820 13.277341 10.511089 10.866082 5.552887 8.744753 10.133697 6.601796 10.668843 9.633749 9.769046 9.455625 12.829331 10.876368 11.821771 10.275164 8.775723 NA 9.379846 6.249495 11.075637 6.202700 11.108533 6.034755 9.699828 10.512688 8.035334 13.991965 10.975096 10.236002 12.855170 9.678611 2.395337 7.330478 10.774056 10.674330 9.236002 TCGA-E2-A152 56 0 NA 2128 breast stage i t1c n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 1 NA 3 1 2 2 6 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.913097e-06 7.976338e-07 13.7614678899083 62.3853211009174 3.6697247706422 13.7614678899083 6.42201834862385 9.8951379 10.3377920 11.6572473 9.5552600 7.7043761 9.4275886 10.6826552 10.1615663 11.9167122 15.0279288 9.7861919 10.9079727 0.6627524 17.9756510 2.3631430 9.7301515 3.7920016 8.7261122 4.5206988 12.4226053 -0.3373387 12.6522890 6.9341803 8.8264675 10.6940737 8.8963366 2.9106367 9.0646633 10.5164165 0.2476845 9.9630696 8.8697314 2.1221426 4.6169105 9.7036917 10.7478576 9.3931873 11.1724921 10.2979818 12.2265092 11.3128713 9.7640362 16.4693988 7.1435475 10.0758161 10.8156356 10.8263667 3.9106463 4.9481196 8.7475254 11.8916861 0.2476845 11.2872841 5.1056613 6.2173063 5.5815802 9.7207087 11.3850977 10.0175173 11.5618851 12.7290586 7.0847818 10.5886423 9.9583426 11.0520795 11.2551741 4.7920016 11.7284698 11.5093828 NA 10.5733598 8.9733297 2.1273691 5.9295046 10.4020758 8.9201048 9.2718958 9.7771101 2.1221426 9.2966205 12.6178221 11.2228110 10.2911626 9.6563632 0.242600 0.258510 -0.545350 0.000000 0.312050 0.308840 -0.112380 -0.112380 -0.127490 -0.127490 0.363740 0.291470 -0.100560 0.208050 0.191280 0.191280 0.289240 0.289240 -0.994480 0.289720 0.664880 -0.550130 3.656900 -0.534320 -0.528010 0.204990 0.204990 0.273120 -0.081244 -0.129050 -0.112860 -0.545350 0.312050 0.312050 0.308840 0.308840 -0.134750 -0.112380 -0.112380 0.289560 0.300060 -0.127490 -0.527900 -0.527900 0.269650 0.269650 -0.100560 -0.138740 -0.534220 0.191280 -0.535840 0.200560 0.289240 0.289240 0.289240 -0.907010 0.289720 0.289720 -0.543290 0.262900 -0.550130 -0.517670 -0.530960 -0.528010 0.204990 0.193860 -0.505180 0.211720 -0.162850 0.291 0.191 0.191 0.191 0.289 0.289 -0.924 0.290 -0.543 0.263 0.263 -0.550 -0.550 -0.531 -0.531 -0.323 0.205 0.241 0.241 0.273 0.273 0.402 0.704 -0.109 -0.109 -0.545 0.000 0.312 0.312 0.309 0.309 -0.112 -0.112 0.290 0.290 0.236 0.364 -0.528 -0.258 -0.512 -0.224 0.291 0.191 0.191 0.191 0.289 0.289 -0.924 0.290 -0.543 0.263 0.263 -0.550 -0.550 -0.531 -0.531 -0.323 0.205 0.241 0.241 0.273 0.273 0.402 0.704 -0.109 -0.109 -0.545 0.000 0.312 0.312 0.309 0.309 -0.112 -0.112 0.290 0.290 0.236 0.364 -0.528 -0.258 -0.512 -0.224 8.7448661 7.1343924 6.0114442 10.9446471 10.5518407 5.8770350 11.3618557 8.8002975 8.5315398 NA 12.5529814 12.2359915 0.9846258 1.2476845 3.7920016 7.8915358 3.7501777 12.2500258 11.1493007 10.3653227 8.4159340 4.3631571 8.1465330 9.6920043 5.9011227 3.7501777 2.1221426 -1.3371565 10.8329551 4.0550308 7.9153823 8.4522507 8.5113399 9.8654348 10.0475008 3.6627182 8.5253544 0.2476845 8.3527148 14.0507680 6.9801293 8.3065730 NA 1.2476845 7.9341803 5.0025675 3.5206988 NA 3.8721688 3.6645170 2.8326470 12.0796465 2.9106367 9.5771023 10.1338842 9.8800690 5.0025675 9.9118306 12.0239755 8.2420332 2.1221426 4.4176028 9.8782501 3.4176095 NA 0.6627524 1.9846623 11.679003 5.581580 9.011445 17.975651 9.463617 10.282478 12.422605 11.218504 9.018278 10.907973 13.017931 7.486084 8.747525 9.034494 NA 7.024661 10.827310 11.6127261 12.9228280 7.8891291 15.2795522 9.2765064 6.6052321 9.3465889 8.2514318 10.8418518 6.6110838 8.4226051 9.7861919 7.0070127 2.2476845 11.5633952 8.4075508 7.7657423 13.1103169 10.2220942 10.9989446 6.9801293 8.5050676 10.7240882 4.4700748 10.9627550 9.3931873 10.4109100 9.8587043 11.4079712 9.6227190 10.4916469 10.8360819 8.7894215 9.8855120 9.4859410 9.6118653 11.8916861 3.5206988 11.2872841 9.0235642 11.2163368 9.7207087 7.1384510 13.4068676 10.2806437 10.0361261 12.4819981 10.4808997 -1.3371565 -0.8937857 10.3700762 10.7554742 10.0651962 TCGA-E2-A153 51 0 NA 707 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 1 1 2 NA 2 2 4 1 5 5 3 3 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.387189e-07 47.3684210526316 15.7894736842105 10.5263157894737 10.5263157894737 15.7894736842105 10.4121730 9.7282005 11.5297324 8.9545069 8.7992654 8.9833297 9.9504578 9.3618414 10.7535198 12.8375885 10.6609061 10.2149781 0.7385517 13.2690571 3.6130365 10.8015150 6.8046589 8.2595154 9.0784196 12.5801338 2.8540555 13.1803033 5.5286463 9.4945474 10.7000192 7.5502119 NA 9.6514588 8.6849884 1.9609565 7.9928109 8.2542695 NA 5.3630589 9.5416242 9.8798252 7.9316842 11.7834189 9.4676237 10.8828028 NA 11.6194284 15.3932055 7.2037826 9.5566191 10.7163264 11.2240634 4.6454596 2.4755259 8.8313266 10.6864499 -0.8463244 11.1447745 6.7460641 5.6130395 4.3630589 10.2706007 11.5526178 10.6791278 13.1437996 12.6162370 8.6985713 11.1048917 10.3492745 11.0806441 10.8475295 4.3630589 12.3848282 11.2203689 NA 10.6384298 9.3235320 3.2419164 5.8401082 10.5491411 10.0887721 10.2854639 9.9374237 5.1308856 10.2404066 13.5251794 12.8444780 10.0717249 9.4990123 1.021400 1.030400 -0.061152 -0.066989 -0.078011 0.184950 -0.279530 -0.279530 -0.069600 -0.069600 0.607740 0.000000 0.000000 -0.071873 -0.071873 -0.071873 -0.080674 -0.080674 0.029466 0.164150 -0.069466 -0.446200 0.245130 0.245130 0.146820 0.146820 0.146820 0.565610 -0.080807 -0.080807 0.029184 -0.061152 -0.078011 -0.078011 0.184950 0.184950 -0.279530 -0.279530 -0.279530 0.180260 0.180260 -0.069600 -0.093667 -0.093667 -0.093667 -0.093667 0.000000 0.000000 -0.071873 -0.071873 -0.071873 -0.071873 -0.080674 -0.080674 -0.080674 0.029466 0.164150 0.167150 -0.069466 -0.506810 -1.171600 0.245130 -0.066654 0.146820 0.146820 0.565610 -0.007472 -0.387830 -0.394810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.164 0.000 0.648 -0.507 -0.446 -0.201 0.000 0.000 0.147 0.147 0.000 1.021 0.566 0.566 0.000 -0.388 0.000 0.000 0.000 0.000 0.000 0.000 0.185 0.185 -0.280 -0.280 0.180 0.180 0.000 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.164 0.000 0.648 -0.507 -0.446 -0.201 0.000 0.000 0.147 0.147 0.000 1.021 0.566 0.566 0.000 -0.388 0.000 0.000 0.000 0.000 0.000 0.000 0.185 0.185 -0.280 -0.280 0.180 0.180 0.000 0.608 0.000 0.000 0.000 0.000 7.9217916 NA 5.5111581 10.7961100 11.5089581 7.0438104 11.3845280 9.3421834 8.6278198 2.9609565 11.9687901 11.7364194 3.8540455 2.6130365 3.9084959 7.4390089 4.2410698 11.1444201 11.3590948 10.7637090 8.8849260 2.3235430 8.0301242 10.2731966 6.5544860 2.7385733 2.7385733 NA 11.1175867 4.3630589 6.7683167 7.9283940 7.1251510 10.3272092 10.6648655 4.9084959 8.2931585 NA 8.3033543 12.2114295 8.2357563 9.0224294 NA 0.7385517 8.4956816 3.2410622 3.6130365 NA 2.7385733 4.5136171 1.1536108 10.3279085 NA 7.8644134 10.0069165 9.8091377 5.2410698 8.9990969 12.0612488 8.2854637 2.4755259 4.3630589 10.6278199 4.1536108 NA 2.3235430 1.4755519 13.000371 4.960961 8.208889 13.269057 10.557152 10.566177 12.580134 11.936196 9.192526 10.509509 13.447294 11.394100 8.831327 9.641447 0.153546 7.343432 11.252626 11.039685 11.895285 7.125151 13.528643 9.157827 3.677170 9.178747 7.779316 9.892096 6.392012 6.908495 10.660906 7.363061 4.323529 10.981743 7.313478 5.149772 12.958343 10.604818 10.624266 8.615086 9.152197 11.737395 3.854046 11.207224 7.931684 10.488439 9.984122 11.064624 10.076934 10.195950 10.467624 8.843605 NA 9.316426 7.211978 10.686450 2.738573 11.144774 9.242395 10.453387 10.270601 6.708196 13.980751 9.982537 10.294437 13.119752 10.727727 NA 0.153546 10.065748 9.946397 9.393206 TCGA-E2-A154 68 0 NA 591 breast stage i t1c n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 2 NA 2 2 4 1 5 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.005712e-06 2.774378e-07 29.7297297297297 18.9189189189189 5.40540540540541 27.027027027027 18.9189189189189 9.940466889 9.582892026 11.653147773 9.778455993 8.759554012 9.046652027 9.874776682 9.978633675 9.765333014 13.147531800 11.128040476 9.823468512 6.613421148 12.987401754 4.383690470 9.537299368 4.922107439 8.200823098 11.779476259 13.623285650 4.161291138 13.959631479 1.798714147 9.476192508 11.274458061 5.874012465 NA 7.974363535 10.123226719 -0.008682243 7.674364604 6.705615801 NA 2.691802133 10.480715894 10.375073977 10.436901911 10.774777260 10.343964938 11.793482118 5.313296650 11.706044533 14.963429558 8.344428186 9.505097372 11.644662656 11.408694827 4.849348800 NA 9.061490546 10.878590328 -0.008682243 10.617078500 5.013739159 4.120650535 3.450802153 10.284266459 12.071354391 10.246988388 12.463425849 12.925521265 7.646005646 10.505590569 10.312807416 11.330384562 11.020656928 6.258157075 11.738723512 10.557899508 NA 10.495692165 9.203257939 4.451784778 4.078831823 11.400230131 11.036446737 10.444125772 10.161294665 9.517868950 9.994887559 12.268657084 11.369393523 10.873248382 9.202041032 0.7840800 0.7802200 0.1367200 0.1367200 -0.3471000 0.0000000 -0.0180780 -0.0180780 0.4711500 0.4711500 0.4711500 0.1456300 0.1559100 0.0000000 1.2041000 -0.0631660 0.0407510 0.0259520 0.4975300 0.1724200 -0.1173000 0.0146090 0.0146090 0.0146090 0.0512450 0.0512450 0.0512450 0.3866700 -0.5262400 -0.5262400 -0.0230180 0.1367200 -0.3471000 -0.3471000 0.0000000 0.0000000 -0.0180780 -0.0180780 -0.0180780 0.4811300 0.4811300 0.4711500 0.1339100 0.1339100 -0.2447200 -0.2267500 0.1559100 0.1685000 -0.0011306 0.0000000 -0.0631660 -0.0631660 0.0407510 0.0259520 -0.3531600 0.4975300 0.1724200 0.1724200 -0.1173000 -0.5856300 0.0146090 0.0146090 -0.5397700 0.0512450 0.0512450 0.3866700 0.3283400 -0.0015243 -0.0015243 0.156 0.156 0.000 0.000 0.000 0.000 0.498 0.172 -0.117 0.798 0.237 0.000 0.000 -0.540 -0.540 0.000 0.000 0.258 0.784 0.387 0.387 0.328 0.000 0.000 0.000 0.137 0.137 -0.347 -0.347 0.000 0.000 0.000 0.000 0.481 0.481 0.471 0.471 0.134 0.134 0.215 0.000 0.156 0.156 0.000 0.000 0.000 0.000 0.498 0.172 -0.117 0.798 0.237 0.000 0.000 -0.540 -0.540 0.000 0.000 0.258 0.784 0.387 0.387 0.328 0.000 0.000 0.000 0.137 0.137 -0.347 -0.347 0.000 0.000 0.000 0.000 0.481 0.481 0.471 0.471 0.134 0.134 0.215 0.000 8.387974650 4.035764654 4.545956017 10.316675136 11.478958563 7.613567749 11.037129390 7.782955632 7.980763944 -1.008682243 11.533917934 10.572993946 2.798734881 3.898256732 4.035764654 8.304252743 2.576328637 9.722688696 11.607918554 10.924691532 9.627087875 4.849348800 7.335665468 10.195940806 4.313296650 0.576377015 2.576328637 NA 10.544519002 6.002596767 6.499165029 7.974363535 6.434312968 11.002820640 10.479209741 3.635220391 9.046652027 NA 7.073518212 12.935258070 8.809952010 6.434312968 NA NA 7.968649515 2.313303907 3.746259014 NA 1.576328637 6.753652668 -0.008682243 10.678745370 NA 5.467103372 10.597312161 9.996292417 3.078831823 9.728616965 11.960756217 7.130920577 2.991372184 2.691802133 10.993481474 0.991390325 NA 4.719287504 NA 13.977570 5.635226 8.274458 12.987402 10.594996 10.596386 13.623286 12.249788 8.907249 10.954266 12.878971 12.104461 9.061491 8.982891 0.576377 7.514932 11.203866 10.893745 12.179804 8.057459 13.073019 8.364235 2.576329 8.731150 9.487225 10.397559 5.239299 8.587559 11.128040 6.591283 3.945570 11.550747 8.002597 7.893504 10.433276 10.236328 10.962554 9.654038 8.033029 12.077506 2.691802 12.551637 10.436902 10.510514 9.936814 11.901825 8.998397 10.105112 10.435349 9.069520 NA 8.970695 8.920110 10.878590 1.991354 10.617079 8.331220 10.453872 10.284266 6.933884 13.736098 9.563122 10.129641 12.831558 10.549312 NA 3.635220 9.957875 10.401291 9.369665 TCGA-E2-A155 58 0 NA 640 breast stage iib t2 n1a m0 female 2009 NA no infiltrating ductal carcinoma 2 white not hispanic or latino 1 1 4 NA 2 2 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 7 0 0 0 0 0 0 1.24847e-06 4.855162e-07 26 24 6 32 12 10.9950060 9.8089848 12.5225948 10.3119389 8.3974222 8.9633458 10.6299547 9.2521110 10.0758715 13.7068312 10.2434057 10.2703542 0.7595820 13.8617844 4.1746301 7.0845204 5.5924810 8.0465325 6.4600299 12.8468318 4.1969925 14.8701413 -0.8254657 8.6574353 11.2049498 7.9177790 1.3445445 7.3269121 9.4249259 -0.2404180 8.1476074 7.4296561 NA 3.7292156 9.9563971 10.2524446 9.1837562 10.6371297 11.2953514 11.6187365 -0.2404180 11.9881081 15.3844997 8.8266568 10.6687331 11.6240341 11.4011902 3.8750625 1.6340821 10.1879502 10.3746066 NA 11.2358299 3.2620873 4.1519075 3.1746301 9.9522938 12.2660629 9.5077829 11.3816418 13.0889659 7.3470553 11.4049482 10.7578654 11.7142710 11.4944407 5.4507527 12.1797257 12.3990061 NA 10.1215338 8.6061250 1.5008530 3.3039122 9.9067949 9.7810328 10.2890206 10.3934934 2.5669369 3.4600348 11.3286545 10.0161918 10.0079129 9.2746328 0.0120460 -0.0029522 0.0084228 -0.0025450 0.0028620 1.8007000 0.0621700 3.6569000 0.0145580 0.0145580 0.0145580 0.0025844 0.0025844 0.0221120 0.0221120 1.9858000 -0.7301500 0.0163740 -0.7364000 0.0110700 -0.0011600 -0.7461500 0.0638860 1.7312000 -0.0115240 -0.0115240 -0.0115240 0.0225330 0.0117670 0.0120460 -0.0042057 -0.7419700 0.0028620 -0.0011600 -0.7353700 -0.7407500 -0.7272400 0.0073094 -0.0318190 0.0000000 0.0095368 0.0145580 -0.0021296 -0.0021296 -0.0021296 0.0096761 0.0025844 0.0025844 0.0221120 0.0221120 -0.7321400 -0.7321400 -0.7301500 0.0163740 0.0163740 -0.7364000 -0.7344500 -0.7344500 -0.0011600 -0.7418900 -0.7461500 -0.7082200 0.0081444 -0.0115240 -0.0115240 0.0225330 0.0010581 0.0074486 0.0074486 0.000 0.000 0.000 -0.732 -0.730 0.000 -0.736 -0.734 0.000 0.000 -0.740 -0.743 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.779 -0.741 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.125 0.000 0.000 0.000 -0.732 -0.730 0.000 -0.736 -0.734 0.000 0.000 -0.740 -0.743 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.779 -0.741 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.125 8.2726596 6.2244764 2.6340588 9.9403280 12.5967580 6.6511306 10.4672367 8.1391128 8.4147512 2.4225560 13.2135465 11.0368290 2.7595820 4.2831513 3.3039122 7.5343768 3.0815101 8.0994399 11.7518203 10.6954917 9.4726900 0.9819987 7.7930128 10.5266709 6.1112651 5.6175718 NA -1.8252101 10.1123691 6.9722894 4.1053680 7.6196426 5.2080490 9.4998206 10.6424878 1.7595820 8.2353235 NA 5.7292156 12.4291395 8.4367224 5.5233549 -1.8252101 9.0248144 8.2271957 5.7966782 4.4034450 -0.8254657 3.4965518 7.1426605 0.7595820 10.2601000 NA 7.1375240 9.3395345 9.8952993 3.9025464 8.5111339 11.7996514 6.6175703 2.1746301 2.3445445 13.5862047 1.9819987 NA 0.1746621 -0.8254657 14.457148 6.344553 8.703082 13.861784 9.401040 9.984797 12.846832 13.707044 10.711603 10.453367 12.335129 11.064702 10.187950 8.012255 -0.240418 8.557252 11.092373 9.6609598 11.5653339 7.6624676 14.1377037 8.7708172 3.9559916 7.8202862 8.6320082 10.5980875 4.6824216 4.3243714 10.2434057 6.7099027 0.4965135 11.4571368 2.1746301 7.4566501 10.7390152 9.5924800 9.8965811 7.9144079 9.4022434 12.1628684 4.4414171 12.7385709 9.1837562 9.9888094 10.1097925 13.6261606 7.9042480 10.8763671 10.7555926 9.4611854 1.1745982 8.2098388 7.0414117 10.3746066 5.3243750 11.2358299 6.4646470 12.3244540 9.9522938 7.7001484 13.4760165 10.6649770 9.6819266 11.6063862 10.3039105 1.4965646 -1.8252101 11.1481455 10.3451786 9.9803714 TCGA-E2-A156 61 0 NA 726 breast stage i t1c n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 NA 2 2 4 1 3 4 NA NA 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 0 25 41.6666666666667 0 16.6666666666667 16.6666666666667 10.9807240 10.0116527 12.0980529 10.2598971 8.1511612 8.4075010 10.8516011 9.0648365 9.3097073 13.2433312 11.2699976 11.1946720 -0.4781452 13.3076659 3.8437327 8.0216507 7.0295998 8.5441724 11.0211524 13.4787253 1.5218046 14.1809645 6.1942309 9.4063721 11.2463186 4.2222481 NA 8.1800160 10.2699976 -0.4781452 7.9605968 5.8072081 1.1067503 2.8437427 10.4525421 10.8014153 9.8392173 12.0947418 10.4211616 11.9237509 NA 11.8389347 14.3412354 7.6635545 10.0754341 9.9944956 11.6115862 3.6092704 5.5878930 9.2205094 11.3283544 -0.4781452 11.2841868 8.3952488 3.7697294 4.0453643 9.5946073 11.5083579 10.3507346 11.6929815 12.8912658 7.7312579 10.8181475 10.8616547 11.4162436 11.6616758 5.2766939 13.1329448 11.9883911 NA 10.3562758 9.0551344 4.1157574 3.6092704 10.9904288 10.3080744 10.2716742 9.6510878 1.1067503 6.2497260 12.9844348 11.9475452 10.2394812 9.6549469 0.00000000 0.00000000 -0.00110870 -0.01354600 -0.00180140 -0.00076532 -0.00124730 -0.00124730 0.00388540 0.00388540 0.00032540 0.00152550 0.00361780 0.00260320 0.00260320 0.00374650 -0.00069303 -0.00069303 -0.00166290 0.00013863 0.00610900 -0.00138580 -0.00138580 0.00044789 -0.00899060 -0.00899060 -0.00899060 0.01307400 0.00000000 0.00000000 0.00194180 -0.00110870 -0.00180140 -0.00180140 -0.00076532 -0.00076532 -0.00124730 -0.00124730 -0.00124730 0.02188400 -0.00013862 0.00388540 0.00249690 0.00249690 0.00249690 0.00249690 0.00361780 0.00361780 0.00260320 0.00260320 0.00374650 0.00374650 -0.00069303 -0.00069303 -0.00069303 -0.90137000 0.00013863 0.00013863 0.00610900 -0.94598000 -0.97517000 -0.00138580 0.00485790 -0.00899060 -0.00899060 0.00661940 -0.00083160 -0.00443120 -0.00443120 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.779 -0.946 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.779 -0.946 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.2699976 NA 6.6715524 10.5225091 11.4617512 6.5947680 11.7631921 8.5734760 8.6867117 0.5218548 11.8178606 10.0810671 3.7697294 2.9812316 3.2222481 7.9354326 2.5218046 9.2982379 11.3633691 10.4606492 9.4135884 6.0136588 7.9975380 10.1030053 4.8072055 -0.4781452 1.1067503 NA 10.7560234 6.4760009 5.3031634 8.5607237 8.0992337 10.8197642 10.1746497 2.5218046 8.5552276 NA 7.4990845 12.7537759 8.4166223 6.9647486 NA 5.8793578 7.9522573 2.6917351 1.8437427 NA NA 6.6242530 1.1067503 10.3937100 NA 5.3546955 10.3499412 9.4181372 4.3797873 9.6119171 11.3291597 6.8164256 1.8437427 1.1067503 13.2394812 3.3291667 NA -0.4781452 NA 13.325028 5.076392 9.025630 13.307666 10.212676 10.425687 13.478725 13.565943 9.528832 11.041441 12.362779 9.917339 9.220509 8.922684 NA 7.487589 11.511909 11.078790 11.610593 7.651088 13.764011 8.716562 1.106750 9.378230 8.640746 10.420958 4.731259 6.731258 11.269998 4.769735 NA 11.713789 7.701714 6.457264 9.011653 9.419650 10.423426 9.225708 7.481807 13.484249 1.106750 11.092723 9.839217 10.222244 9.926946 11.958256 9.415106 10.178230 10.651732 9.776833 NA 9.606733 3.981241 11.328354 NA 11.284187 5.788592 10.710394 9.594607 6.922684 13.731639 10.136515 10.542090 13.010147 10.317033 NA NA 10.906588 10.893037 9.839217 TCGA-E2-A158 43 0 NA 450 breast stage iia t1c n1mi m0 female 2009 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 3 3 4 NA 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.358222e-06 3.121176e-07 13.9240506329114 6.32911392405063 5.06329113924051 45.5696202531646 29.1139240506329 8.82365034 8.90015857 12.03351640 9.61942218 8.59597352 9.55711940 10.02926417 11.06062325 10.67461477 13.00661168 11.21523988 10.80027174 5.16938790 12.23445270 3.74054984 9.64001911 6.58442740 7.70780913 11.46006640 6.66459661 NA 8.62882097 8.56627937 8.14688734 10.41840112 3.77707248 -1.54498190 7.12047947 10.61343782 -1.54498190 5.58442740 6.26249893 -0.54477143 2.84745579 10.26169335 9.57926502 8.91355037 8.25442539 9.97919566 11.75177321 2.45514965 10.79721836 14.45007165 8.04653526 11.17303215 10.24182172 10.78913762 3.88141012 1.91456452 9.62757127 10.08450029 -1.54498190 10.19323593 2.97870817 7.32550874 4.70307301 7.64001929 11.95872104 9.72075882 12.59533442 13.17447906 5.06985251 11.12513601 11.35051642 11.15015447 11.32512305 5.04010776 12.14339402 8.86771365 2.26249329 9.25442539 9.93643860 4.78139119 2.91458366 11.11000351 10.26370570 11.23260452 9.91611145 0.04012092 7.80387215 12.75792542 10.05459170 9.90274366 10.96640220 0.9210800 0.9428200 0.0797350 0.7528000 -0.0080244 -0.9805400 0.0496820 0.0100470 -0.0197260 -0.0197260 3.6569000 0.9373200 0.0360880 -0.9322300 0.0606510 0.0606510 0.8667200 0.0114000 0.1730200 -0.9365100 -0.7049600 -0.9031200 -0.9031200 -0.9031200 0.0545180 0.0545180 0.0695250 0.0485460 -0.6415100 0.8796600 0.0646540 -0.9469500 0.1007400 0.9005000 -0.9531200 -0.9464900 0.0328600 -0.0010234 0.1045300 -0.9334100 0.9434300 -0.9563100 1.7777000 1.7777000 0.0282710 0.1059900 0.0360880 -0.9416100 -0.9079800 0.0823320 -0.9274100 -0.9274100 0.0175440 -0.0023553 -0.0023553 -0.9429100 -0.9254000 0.0551630 0.0123760 0.0913000 -0.9031200 -0.9031200 0.0963800 -0.8417100 0.0695250 0.0323230 -0.0268510 0.0852210 -0.9195700 0.000 0.000 -0.932 -0.932 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.903 -0.903 -0.878 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.810 0.000 0.000 0.000 -0.825 0.000 0.000 -0.887 0.000 0.000 0.000 0.000 0.000 0.000 0.802 0.000 -0.354 -0.354 0.000 0.000 -0.932 -0.932 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.903 -0.903 -0.878 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.810 0.000 0.000 0.000 -0.825 0.000 0.000 -0.887 0.000 0.000 0.000 0.000 0.000 0.000 0.802 0.000 -0.354 -0.354 8.53729296 NA 3.45514965 11.15753288 11.51059566 6.18612415 10.74919006 8.64151785 8.16837578 NA 10.28724256 11.00830739 6.56366762 NA 6.06985251 10.33893255 3.45514965 8.93593379 11.57457125 11.45602399 10.57213744 NA 8.79721827 11.13506358 5.34996321 7.87720866 -1.54498190 NA 10.12225533 7.57667707 3.15558734 7.99817575 5.14164532 10.68021560 11.72310082 0.04012092 9.63256323 4.43242498 9.48650040 13.38190300 8.18985321 7.06616886 NA 8.11692196 7.63505275 5.38587965 4.26250081 -0.54477143 3.31312973 5.47751220 3.45514965 10.30180939 5.53195842 4.64496952 11.27751541 10.21253371 2.91458366 10.96566064 12.49183248 5.79499283 1.45512334 1.26249329 11.16917453 1.04012092 0.04012092 0.04012092 3.49953978 8.066168 8.884551 8.478898 12.234453 10.567257 10.864535 6.664597 11.712826 9.478898 11.957230 13.843834 12.747034 9.627571 9.675522 4.664597 7.488566 10.356765 10.7933230 12.0473672 7.6694627 14.7214894 9.1284439 4.2365003 9.6256948 6.4381381 10.6366438 3.5844214 5.6743109 11.2152399 10.7899757 0.7770304 11.1834894 9.9782155 9.1490225 13.0836462 10.6929512 10.8482660 7.4122455 7.3224221 7.6074287 5.4663694 11.3746589 8.9135504 9.6815559 9.8666547 11.2187711 9.3567649 11.4639225 11.0501680 8.6887633 NA 8.5165014 8.2830897 10.0845003 4.7030730 10.1932359 6.2560445 12.0685672 7.6400193 7.8939355 15.7820296 9.9821320 9.9967244 12.4008619 10.6209928 1.6250834 -0.5447714 11.5648112 10.1594797 10.2777146 TCGA-E2-A159 50 0 NA 762 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 3 2 4 NA 1 1 5 5 2 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.989553e-06 8.661322e-07 8.39160839160839 67.1328671328671 4.89510489510489 11.8881118881119 7.69230769230769 9.97566973 9.27375784 11.99094189 9.56250747 8.25785358 8.87993086 10.58381606 10.67803721 10.25995612 12.70761121 10.15087340 10.38468134 1.51470301 11.87087882 3.26958677 10.31276874 6.43356541 8.52453075 7.00655498 11.10949312 0.09963185 9.96694317 7.41556855 9.72199700 10.95531164 5.17291149 -0.48539797 9.78832861 11.40591612 1.97412545 8.80356803 9.29606181 NA 6.20120256 10.21687473 10.38043531 9.62453266 10.38583717 10.21036524 11.73583595 10.06641026 8.88320840 14.69003712 8.96403641 9.78616506 10.98637723 10.73326519 3.32205793 3.15856324 9.50196593 11.57201684 NA 9.79315149 5.90702043 8.20818899 5.39734435 9.09872483 11.56676051 10.36058397 11.02076157 12.44894572 7.52872211 10.98637723 10.02818290 11.04924807 11.31661241 4.92409513 12.06857123 7.84113155 NA 10.69243295 9.62844408 2.90977310 6.50905605 10.87225401 10.12710974 9.80472089 9.80932279 1.97412545 9.56523082 12.08420162 12.35075234 10.15268527 9.21687460 0.26975 0.50620 -0.27786 0.29517 -0.26312 -0.34870 0.27553 0.27206 0.30074 0.30074 0.29779 0.85304 -0.26733 0.02806 0.02806 0.02806 -0.25067 -0.25067 -0.28418 -0.24180 -0.25237 -0.17145 -0.17145 -0.17145 -0.24314 -0.24314 0.29135 0.29963 0.28659 0.26975 -0.26480 -0.26155 -0.26516 -0.26312 -0.34870 -0.34870 0.27553 0.27206 0.26737 0.27710 0.28026 0.30074 0.28089 0.28089 -0.28168 -0.23423 -0.51671 -0.28096 -0.24788 0.02806 0.02806 0.02806 -0.25067 -0.25745 -0.25745 -0.25540 -0.24180 -0.24180 -0.25237 -0.25745 -0.17145 -0.17145 -0.25630 -0.24314 -0.24314 0.29963 0.29183 -0.26107 -0.25783 0.586 -0.267 -0.265 -0.265 -0.251 -0.251 -0.255 -0.242 -0.252 -0.257 -0.257 -0.171 -0.171 -0.256 -0.256 -0.243 -0.243 0.508 0.508 0.300 0.300 0.292 -0.261 0.279 0.015 -0.262 0.034 -0.263 -0.263 -0.349 -0.349 0.276 0.276 0.277 0.277 0.301 0.301 0.025 -0.256 0.000 0.000 0.586 -0.267 -0.265 -0.265 -0.251 -0.251 -0.255 -0.242 -0.252 -0.257 -0.257 -0.171 -0.171 -0.256 -0.256 -0.243 -0.243 0.508 0.508 0.300 0.300 0.292 -0.261 0.279 0.015 -0.262 0.034 -0.263 -0.263 -0.349 -0.349 0.276 0.276 0.277 0.277 0.301 0.301 0.025 -0.256 0.000 0.000 7.16933779 7.10341686 6.54260785 10.36371602 11.64639823 5.90598863 12.20076475 9.89630985 8.03359094 -1.48519601 13.34402833 11.56841072 3.32205793 NA 3.37268749 8.99043531 4.18712637 11.31539969 11.59034827 10.59151758 9.39734499 1.32204351 9.57066215 9.98840776 8.06159639 5.75310708 7.59685093 1.51470301 10.66825407 5.68462801 5.97413463 8.67331155 6.32205613 9.59080278 10.61009902 4.21514273 8.80472089 -1.48519601 8.33168551 11.75683404 8.15313804 7.96591297 0.09963185 3.83663110 8.13492168 3.97413463 3.15856324 -1.48519601 7.71191884 3.51920220 3.09966551 10.76825406 0.51470301 10.40306477 10.79257054 9.73447559 6.75310708 10.79373213 12.95238905 8.99549215 5.53706927 5.09966551 9.64655889 2.51470301 NA 2.32204351 4.55909407 10.196626 8.549501 8.457217 11.870879 10.102011 11.540880 11.109493 8.483369 9.273425 10.471441 13.145538 8.879931 9.501966 7.125727 NA 7.733870 11.510999 10.91077156 12.50524920 5.86343054 14.47461203 9.69833744 7.89408047 9.07024977 9.38814605 10.66442053 7.71927313 6.22894757 10.15087340 10.09731451 0.09963185 10.72171630 9.23921591 8.63416196 11.54191688 10.86922692 10.51152852 7.14405861 9.16844272 9.32607664 8.20295246 11.20334354 9.62453266 9.84393769 10.14678834 12.03101760 10.41594601 9.13308748 10.44173919 9.49412715 10.35311804 9.78980211 8.01404949 11.57201684 8.98332598 9.79315149 6.85899799 10.84867074 9.09872483 7.71993294 13.61121127 11.00178831 10.41971290 12.39256126 11.16642642 1.83661091 0.51470301 11.04681434 9.98077851 9.38506665 TCGA-E2-A15A 45 0 NA 710 breast stage iiic t2 n3a m0 female 2009 NA yes infiltrating ductal carcinoma 13 white not hispanic or latino 3 2 1 NA 1 2 1 2 2 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.179111e-06 6.935946e-08 19.4444444444444 19.4444444444444 11.1111111111111 36.1111111111111 13.8888888888889 10.40189846 9.84413987 11.63845171 10.03351730 8.59897144 9.15264839 9.63598832 10.46399532 8.81830000 15.17055529 11.08052463 10.86433521 -0.64430710 13.04966567 3.48507899 8.14370004 5.48508221 8.84263257 8.98879288 12.58281179 3.26268872 12.87844043 0.35580564 9.27092997 11.84263261 4.98515429 -1.64430710 9.11318764 11.17896581 1.52571811 9.05189572 7.62492410 -0.64430710 5.35579859 10.42188684 10.41074103 9.61082609 11.28468607 10.06229363 10.81727709 11.16234720 10.80391387 14.52683754 8.89100505 9.81266540 11.40972346 11.74098594 3.48507899 5.23843913 9.58281188 10.11651759 -0.05919428 10.96866607 5.45383032 6.74381518 4.69564868 10.11485358 11.71334961 10.10105174 11.86903173 12.99089218 9.08201568 10.68419203 9.86417670 10.98606473 10.77127528 5.20128883 12.70286527 9.84162693 -0.64430710 10.58100507 9.59420235 2.52812119 5.44326185 10.23154701 10.41716876 10.30489475 10.71004701 2.16314446 7.21066647 11.67292755 10.67941535 9.92137578 9.20598454 0.5723700 1.4037000 -0.4844900 0.3346400 0.1539700 0.4300700 0.1917800 -0.5122800 3.6569000 1.2174000 1.8408000 0.4268800 -0.0542860 0.2421800 2.6226000 2.4586000 0.1665500 0.1981700 0.0000000 0.1662500 0.3422600 0.1046800 0.2025900 0.2025900 -0.4704600 -0.0008316 -0.0008316 1.1799000 -0.4808100 1.7850000 -0.0163580 -0.4844900 -0.0642400 -0.0384740 0.4319300 -0.3058000 0.1333200 0.0682350 -0.0816050 0.2823200 -0.7626100 -0.5182500 -0.4730000 -0.4730000 -0.4730000 -0.4730000 -0.5703100 0.1650500 0.3858400 0.3214100 -0.2696100 -0.2696100 0.1665500 0.1981700 0.1981700 -0.0366740 -0.4723600 -0.8275500 0.3297900 -0.2867900 -0.4214500 0.2025900 -0.4828100 -0.4958000 -0.0008316 -0.4949600 -0.7062100 -0.4750100 0.1769400 0.000 0.000 0.321 0.321 0.198 0.198 0.000 -0.500 0.000 0.000 0.000 -0.219 0.203 0.000 -0.463 0.000 0.000 0.000 0.572 -0.484 0.690 0.000 -0.475 0.131 0.131 -0.445 -0.445 0.000 0.000 -0.278 -0.278 0.000 0.000 0.282 0.282 -0.488 1.300 -0.473 -0.473 0.000 0.000 0.000 0.000 0.321 0.321 0.198 0.198 0.000 -0.500 0.000 0.000 0.000 -0.219 0.203 0.000 -0.463 0.000 0.000 0.000 0.572 -0.484 0.690 0.000 -0.475 0.131 0.131 -0.445 -0.445 0.000 0.000 -0.278 -0.278 0.000 0.000 0.282 0.282 -0.488 1.300 -0.473 -0.473 0.000 0.000 7.94451237 NA 5.63192204 10.20910715 12.00494149 5.67808599 10.47603551 8.68744252 9.33966053 -0.05919428 11.45037019 12.32945911 4.23844296 NA 3.52571811 8.07860503 4.42188978 11.33932565 10.99875182 10.78781745 8.98788388 -1.64430710 8.00325591 10.17358070 7.02113323 2.52571811 2.74811769 NA 10.49246841 3.87936269 6.41108045 7.84564560 7.53819204 10.40466591 10.38024470 3.97050398 8.65957818 0.67771119 6.30416420 11.51913279 8.38784329 6.65041849 NA 7.74165978 8.54562209 1.35580564 3.64119919 -0.64430710 6.39471648 4.57205897 2.81522701 11.36107126 -1.64430710 8.61200631 10.90654438 10.08499343 4.26268872 9.23001059 13.73717156 8.77996389 6.43261372 3.52571811 12.34252850 2.16314446 NA 1.81524751 1.94076814 14.066163 7.093890 8.852652 13.049666 9.824305 10.696482 12.582812 12.868229 10.390940 10.837597 12.653789 9.946852 9.582812 8.915175 2.748118 7.503003 13.040272 10.5731495 11.8713743 7.1695783 13.3813252 8.3487361 6.2983119 9.9672836 9.7357175 9.7187332 6.9815068 9.0501556 11.0805246 6.5894175 -1.6443071 9.9445122 5.7651873 9.0403445 10.4528421 9.8162535 10.1432921 9.3409281 8.8695251 13.0106574 6.7000929 10.9038561 9.6108261 9.8198328 10.2551545 12.2640026 9.7997772 10.9718869 10.3868095 9.3522710 0.9407306 9.0948272 7.0246820 10.1165176 7.1950011 10.9686661 6.9482551 10.1542694 10.1148536 7.2012878 12.5286938 9.9031742 9.7914678 12.4821794 10.2020715 2.0562367 4.9851543 10.7133497 9.6618593 9.1371574 TCGA-E2-A15C 61 0 NA 694 breast stage i t1c n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 5 NA 4 3 3 4 6 3 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.427581e-07 34.6153846153846 15.3846153846154 3.84615384615385 38.4615384615385 7.69230769230769 11.5335244 10.1888361 12.0589388 10.2340989 8.3487282 9.2742617 10.9357544 9.2526654 9.4902492 13.0161815 9.3065174 10.5022351 0.2630344 13.4611213 3.3219281 9.5530533 6.0089888 8.9068906 9.5321611 13.0794848 5.1210154 13.6791722 5.7865964 9.7228553 11.6023277 5.2326608 -0.3219281 7.5422580 8.8826430 1.2630344 8.2364926 7.1898246 -1.3219281 4.8875253 10.2872506 10.0552824 10.1654095 11.6503338 10.5495922 12.1623913 13.3163947 12.4548133 14.2410596 8.1589631 10.1769211 11.7128709 11.4781629 4.0356239 -1.3219281 9.3767766 11.9098931 -0.3219281 10.8722131 5.1210154 5.9354597 3.4854268 10.5344974 11.8073549 10.3724298 13.3371759 13.0108078 7.7813597 11.4571756 11.3718681 11.3217027 11.6980101 5.3923174 11.9984494 11.4858293 -1.3219281 10.1001367 9.7286008 3.3834969 4.3785116 10.8533096 10.2302607 10.2578592 11.0287349 4.6322682 10.2784495 13.4118817 11.5190465 10.2055489 9.9032793 0.0038257 0.0038257 -0.0034627 -0.0034627 -0.0128510 0.0331270 -0.0089906 -0.0089906 1.2793000 1.2793000 1.2793000 -0.0024891 -0.0024891 -0.0071958 -0.0071958 -0.0071958 0.0000000 0.0000000 -0.0158790 0.0015255 0.0086135 0.0294660 0.0294660 0.0294660 0.0300290 0.0300290 0.0300290 0.6151600 0.0410340 0.0038257 -0.0037395 -0.0034627 -0.0128510 -0.0128510 0.0331270 0.0331270 -0.0089906 -0.0089906 -0.0089906 -0.0027707 -0.0049401 -0.7196700 0.0112610 0.0112610 0.0112610 0.0112610 -0.0024891 0.0098669 -0.0071958 -0.0071958 -0.0071958 -0.0071958 0.0000000 0.0000000 0.0000000 -0.0158790 0.0015255 0.0015255 0.0086135 -0.6633700 0.0294660 0.0294660 0.5759400 0.0300290 0.0300290 0.6092500 0.0303100 -0.5953400 -0.5913600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.584 -0.663 0.000 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.609 0.609 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.683 0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.584 -0.663 0.000 0.000 0.576 0.576 0.000 0.000 0.000 0.000 0.609 0.609 0.000 -0.591 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.683 0.582 0.000 0.000 0.000 0.000 8.2779847 NA 4.5849625 10.6253436 11.0636647 7.5179056 10.8709811 9.0110707 8.1824937 1.2630344 11.0179219 11.1145726 3.3785116 2.3785116 2.9259994 8.5235620 3.8875253 10.5591859 11.5677660 10.4153192 9.1527919 1.6780719 7.6322682 10.4321243 6.7761040 5.1699250 1.8479969 NA 11.1636497 8.3698154 8.7004397 8.1022382 9.8137812 10.4084614 10.3051497 4.8073549 8.2686590 NA 8.2364926 12.0971104 8.9680908 7.4396231 -1.3219281 1.0000000 7.6409679 NA 4.4594316 0.6780719 5.5607150 5.3432657 3.6322682 10.0145785 NA 8.1937717 10.2723965 9.5660540 4.8073549 9.6013994 11.9345755 7.5909612 3.0000000 3.2016339 12.0339735 2.5849625 NA NA 1.4854268 12.2716778 4.1375035 8.9943534 13.4611213 10.4561490 9.9348703 13.0794848 12.8684368 9.3009291 11.3440739 12.8369971 9.5014391 9.3767766 8.5622424 0.2630344 7.6553518 11.3425192 11.036174 12.037684 7.061776 13.116471 9.336283 6.517276 9.714932 8.145677 10.681165 6.770829 8.207502 9.306517 6.523562 3.432959 11.448942 5.643856 6.166715 12.114653 10.732337 10.604368 9.507795 8.369815 12.926296 7.830357 12.612516 10.165410 10.807355 10.056909 11.100925 10.415742 10.336730 10.738430 9.569096 NA 9.136684 7.666757 11.909893 8.477354 10.872213 7.928370 10.780510 10.534497 7.504620 13.599773 10.122051 10.470049 12.768184 10.985273 4.070389 2.765535 10.863257 10.864496 10.525129 TCGA-E2-A15D 47 0 NA 526 breast stage iia t2 n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 NA 2 2 4 4 5 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 1.387189e-07 22.2222222222222 18.5185185185185 3.7037037037037 18.5185185185185 37.037037037037 11.259648 9.908574 11.954624 9.455896 8.443611 9.368388 9.992817 8.680035 9.942350 12.255521 11.149845 10.354174 6.895900 13.163844 5.056367 9.857197 7.190412 8.641327 9.699613 12.782852 2.293871 14.735808 6.130365 9.839623 11.018865 7.941836 -1.513337 8.452294 8.819665 5.417245 9.522683 7.151846 -1.513337 4.486508 9.933076 10.707492 10.201184 11.030266 10.461999 11.723121 8.606747 11.453015 14.954926 8.387979 10.250552 11.695353 11.230502 5.071471 2.734439 8.912774 11.179343 -0.513543 11.135092 5.552598 5.293863 4.656433 10.357644 11.684033 10.889788 12.449947 12.781632 7.990335 11.558977 11.318679 11.425537 11.172134 5.025667 11.574138 11.838829 -1.513337 10.294669 9.323349 4.746345 4.636259 11.145613 10.104895 10.277672 10.101679 2.656428 9.508183 13.099378 11.803639 10.028090 9.969821 1.51100000 1.50620000 0.00249690 0.00249690 0.00000000 -0.00249380 0.14384000 -0.02644100 0.52198000 0.52198000 0.52293000 -0.00631780 -0.00631780 -0.00788630 -0.00180140 -0.00180140 0.00027728 0.00027728 -0.00263220 0.00305220 0.51751000 0.04046800 0.04046800 0.04046800 0.00097064 0.00097064 0.00097064 -0.00567570 0.00638710 -0.00705760 -0.00429290 0.00249690 0.00000000 0.00000000 -0.00249380 -0.00390210 -0.26240000 -0.02644100 -0.02644100 0.51542000 0.50411000 0.55620000 -0.00498440 -0.00498440 -0.00498440 -0.00498440 -0.00631780 0.00819590 -0.00788630 -0.00180140 -0.00180140 -0.00180140 0.00027728 0.00027728 0.00027728 -0.00263220 0.00305220 0.00305220 0.51751000 -0.55637000 0.04046800 0.04046800 0.52888000 0.00097064 0.00097064 -0.00567570 0.00889200 0.00319100 0.00319100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.518 0.495 -0.556 0.000 0.000 0.529 0.529 0.000 0.000 1.506 1.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.522 0.522 0.000 0.000 0.120 0.120 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.518 0.495 -0.556 0.000 0.000 0.529 0.529 0.000 0.000 1.506 1.506 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.515 0.515 0.522 0.522 0.000 0.000 0.120 0.120 8.74507528 0.07148811 6.14472145 10.42314722 11.61466471 7.19386831 11.41169280 8.64413424 8.26458616 0.48655993 11.67045474 10.53258960 5.05636676 1.29384130 5.18694816 8.82858398 7.30668786 10.66579637 11.12539765 11.30628919 9.63879410 -0.51354304 7.82635908 10.27196170 6.68618114 8.32255959 NA -0.51354304 10.64984445 5.85283035 6.99430365 8.24972170 6.79939172 10.07172527 11.27379968 3.91277439 8.05826183 0.80842624 8.51855481 12.85828590 8.63879392 7.44651100 NA 2.39338874 9.20589806 2.87882341 6.04875059 0.80842624 5.56332595 6.01140395 2.80844683 9.94389013 NA 8.50887705 10.58848491 9.63689120 5.24139785 9.06959208 11.52027638 7.76959787 3.65643917 3.13037081 12.16433897 1.65645061 NA 4.63625919 2.29387072 12.610879 4.214428 8.795986 13.163844 10.187816 11.185214 12.782852 12.164119 9.314646 10.799109 13.708247 9.952586 8.912774 11.026395 -1.513337 7.539077 11.442704 11.18738239 12.18987214 7.59241742 13.98111175 9.05636486 5.96224361 9.01886531 7.97032508 10.62586872 6.64132782 7.78571728 11.14984497 6.57926615 3.24139785 12.58042193 6.45805220 6.01203002 12.47528270 10.37981079 10.71472668 8.99331262 8.45948900 10.87667824 6.06393862 11.61049480 10.20118405 10.35030839 9.86534603 10.79825761 10.13081622 10.37601325 10.68924534 8.97535361 0.80842624 9.12834419 8.06131070 11.17934266 5.22797591 11.13509155 8.07522401 10.68043188 10.35764448 7.80172646 13.88598747 9.82969499 10.30549077 13.17623429 10.65549468 2.65642772 0.07148811 10.66704003 10.62382069 10.23554063 TCGA-E2-A15E 40 0 NA 630 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 1 NA 2 2 3 3 4 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 23.0769230769231 19.2307692307692 0 30.7692307692308 26.9230769230769 10.5002250 10.1722352 12.0151258 9.8761751 8.5232287 8.9076815 10.2353748 9.3859234 10.2474374 13.6080626 10.6639757 10.6051946 2.8247679 14.3326374 4.9243090 10.3285977 6.8311983 8.9046376 10.0855236 12.4485229 4.1048818 12.9331097 7.7039174 9.3870144 11.2066239 6.4097337 -0.9825056 8.9903967 10.2335566 4.4097371 7.8020517 7.8085800 2.4768483 4.3028162 10.4230904 9.9939811 9.6042569 11.9407445 9.9694303 11.9078713 5.4268082 10.6630755 14.8884560 8.4035596 10.1154491 11.6182592 11.2465363 5.1671652 2.1873560 9.6845286 12.9512921 NA 11.7095966 5.4603592 4.9716125 4.8247729 10.7052301 11.8321998 10.5414690 12.7707383 13.0061905 7.6173301 10.8877817 10.6640748 11.0135374 11.3995006 5.8375951 12.5371761 11.3088756 NA 10.4278684 9.6693657 4.3050366 4.4768483 10.8703367 10.5796595 10.3760683 10.4701731 4.8753967 10.0174170 13.1028065 12.9779621 10.2498379 9.7376612 -0.032178 0.151590 0.159500 0.660870 0.128890 0.155470 -0.120820 -0.410690 -0.673250 2.049900 1.164100 0.094782 -0.024661 -0.119130 0.669000 -0.117830 -0.100130 -0.098945 0.136580 0.146370 0.170160 -0.413660 1.468700 -0.012024 0.125050 0.125050 0.042166 0.355940 -0.081206 -0.032178 -0.377970 0.149500 -0.117570 0.160550 0.103800 0.128740 -0.104080 -0.410690 -0.404620 0.164600 0.154120 -0.708920 -0.684600 -0.393630 -0.393630 -0.061286 -0.024661 -0.100660 -0.106840 -0.119130 -0.107100 -0.107100 -0.123170 -0.098945 -0.383020 0.143550 0.156360 0.177090 0.166400 -0.412010 -0.413660 -0.106480 -0.101050 -0.404510 0.058652 -0.396420 -0.113120 0.145330 -0.695140 0.000 0.000 -0.119 -0.119 -0.123 -0.123 0.144 0.156 0.189 0.005 -0.399 -0.387 0.000 -0.114 -0.114 0.000 0.000 0.000 0.140 -0.399 -0.043 -0.113 -0.384 -0.378 -0.378 0.160 0.160 0.012 0.130 0.104 0.104 -0.412 -0.412 0.150 0.150 -0.428 0.713 -0.394 -0.394 0.000 0.000 0.000 0.000 -0.119 -0.119 -0.123 -0.123 0.144 0.156 0.189 0.005 -0.399 -0.387 0.000 -0.114 -0.114 0.000 0.000 0.000 0.140 -0.399 -0.043 -0.113 -0.384 -0.378 -0.378 0.160 0.160 0.012 0.130 0.104 0.104 -0.412 -0.412 0.150 0.150 -0.428 0.713 -0.394 -0.394 0.000 0.000 8.39679527 NA 4.74533953 10.52024888 11.55050338 7.12902228 11.20043207 9.02630792 8.23129895 6.01741643 12.14250760 10.81557695 3.47684825 1.82476785 3.77230797 8.25103687 2.92430896 9.45932382 11.13343605 10.19296665 8.64312600 6.93030683 7.98320113 10.24623575 5.32119935 9.84872433 -0.98250562 NA 10.91677399 5.97161253 7.41402218 8.87695184 8.05359089 10.37594735 10.30224113 3.71785735 9.16716421 0.01735184 8.07269965 12.89767019 8.96724384 6.31203705 NA 5.18734020 7.75550920 -0.98250562 4.01741420 10.05083999 3.18734020 6.60440645 2.82476785 10.35893587 2.71784638 9.61174172 10.40327944 9.36393082 3.87539673 9.15568878 11.79261580 7.72132070 2.71784638 2.33933695 10.67874977 1.82476785 0.01735184 NA 1.82476785 12.625442 5.061811 9.231736 14.332637 10.530651 10.417229 12.448523 12.531021 8.939377 10.842376 13.197248 11.451002 9.684529 8.219541 NA 7.357267 11.277454 11.2195409 12.3400494 7.6756282 13.7949796 8.7091607 5.1671652 8.8862395 8.3280299 10.3208610 4.9946974 7.3528071 10.6639757 4.7987763 5.0618108 11.3074359 7.8503069 6.9223227 12.1769731 10.0397849 10.5570605 8.6863020 8.8629070 12.0595894 4.4768483 11.1061192 9.6042569 10.1383029 10.0699851 11.3370892 9.9817579 10.3149065 10.6863021 9.0767616 NA 9.5815188 7.5624584 12.9512921 5.3749699 11.7095966 6.1259424 10.5296637 10.7052301 7.3924565 14.1959652 9.9466755 10.1753955 13.3916415 10.1582469 -0.9825056 NA 10.4675973 10.6177946 9.9701582 TCGA-E2-A15F 64 0 NA 658 breast stage i t1c n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 NA 4 3 1 1 3 4 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 6.935946e-08 47.3684210526316 10.5263157894737 0 21.0526315789474 21.0526315789474 10.6033666 10.2185721 12.3425247 9.6677353 7.6699820 9.3570056 10.5285822 9.6893074 8.9444447 13.5481538 11.0168359 10.3174255 2.3420427 12.7093789 2.4575418 9.6885689 6.0517136 8.8966439 7.8682281 12.2544456 1.7571086 14.5763238 3.5119740 9.9198743 11.5054952 5.0050182 NA 7.8966442 8.6057154 2.2165169 8.4816065 7.7570926 NA 3.6150749 10.7181806 10.4304017 10.9216854 10.6154623 9.6714777 11.9133338 1.5644269 10.9096944 14.1730985 7.9336647 9.7134688 12.3890654 11.3380578 5.0050182 7.4644518 8.9345121 11.4960294 -0.2429768 11.0784571 6.4575319 6.2083046 3.7570979 10.4339313 11.5662579 10.4824590 12.2241887 13.0305969 8.9407279 11.0404705 10.4330497 11.9047746 11.3434634 5.4985604 11.1307735 12.2534472 -1.2429768 10.4112811 9.8014867 2.7580046 5.4713371 11.3107219 10.6707301 10.9438260 10.4977167 3.8014898 7.1833575 12.1578387 11.3188579 10.3226708 9.4250912 0.0141900 -0.0673940 0.0280600 -0.0554550 0.0619370 0.0081959 -0.5413100 -0.5185900 3.6569000 0.6260600 0.8408100 -0.1032900 -0.1071100 0.0670880 0.0670880 0.0670880 0.0689520 0.0689520 -0.0921300 -0.5815700 -0.0143660 -0.0088526 -0.0088526 -0.0088526 0.0116790 0.5935000 0.5537200 3.6569000 -0.1332000 0.0141900 0.0129340 0.0280600 0.0619370 0.0538060 0.0081959 0.0081959 -0.5413100 -0.5336800 -0.5113500 0.0620800 0.0549450 -0.6117100 -0.4755400 -0.4755400 -0.4755400 -0.4755400 -0.1071100 -0.1071100 0.0836310 0.0670880 -0.6008000 0.1061400 0.0689520 0.0689520 0.0689520 -0.0921300 -0.5815700 -0.5815700 -0.0143660 -0.6015300 -0.0088526 -0.0088526 0.0202030 0.0116790 0.5537200 -0.4736300 0.0777180 -0.5510600 -0.5510600 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.542 0.000 0.000 0.000 0.000 0.000 -0.551 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 -0.541 0.000 0.000 0.165 0.749 -0.476 -0.476 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.542 0.000 0.000 0.000 0.000 0.000 -0.551 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 -0.541 0.000 0.000 0.165 0.749 -0.476 -0.476 0.000 0.000 8.193804 NA 6.801487 10.409938 11.461429 7.383423 10.529820 9.192388 9.299322 NA 11.336644 11.312866 3.457529 1.757109 2.079020 9.151555 2.342043 10.272792 11.765171 10.886054 8.585229 2.342043 7.993107 9.420651 6.005020 5.779459 2.216517 -1.242977 10.164360 5.183355 6.828555 9.154767 7.779461 10.317789 10.643551 4.042496 9.079021 -1.242977 6.762717 11.551509 9.358863 5.296252 NA 6.745778 8.162234 3.844556 4.042496 1.564427 4.511980 6.623568 2.757087 9.904298 NA 8.740086 9.943826 9.672225 3.927015 9.603367 13.433766 7.060873 3.280659 2.564451 10.959523 1.079020 NA 2.216517 2.844546 14.8283390 7.5119803 9.1979619 12.7093789 10.0343104 10.2972208 12.2544456 12.5674635 9.3579348 11.2546951 12.7848259 10.5704731 8.9345121 7.0835219 0.3420996 7.3973375 13.0045010 10.8636556 11.2521982 6.5449953 13.6619140 9.2031422 5.4295189 9.3800597 9.1234148 9.9761220 6.2489465 8.3231467 11.0168359 5.6759570 3.0050226 10.4058996 4.1494138 7.8241772 11.7343726 9.5844353 10.0262194 10.5425452 8.8616915 12.7706771 6.4009494 12.7777949 10.9216854 10.1445716 10.4879873 10.9096944 9.3588635 10.7881046 10.6420263 8.6366761 0.7571086 8.5899986 6.0424955 11.4960294 7.2569389 11.0784571 5.9567653 10.3611825 10.4339313 7.0005995 12.7443567 9.6774455 9.6096222 13.1727684 10.0396021 3.6639821 2.0790196 10.9783777 10.0002667 9.3088009 TCGA-E2-A15G 76 0 NA 554 breast stage iia t2 n0 m0 female 2009 NA yes mixed histology (please specify) 0 white not hispanic or latino 1 1 2 NA 2 2 4 1 5 6 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 1.179111e-06 6.242351e-07 23.0769230769231 13.4615384615385 3.84615384615385 34.6153846153846 25 10.8783399 9.8767685 12.3301271 9.4870823 8.1560623 9.3139609 10.9485348 9.7088859 9.0673682 13.8656018 11.1674181 10.8864837 1.8830342 12.9468134 3.8005790 8.4204782 7.2009584 8.5252961 9.3881938 13.5398659 3.1054434 14.2241920 6.8216439 9.5555949 11.2052224 7.1182600 NA 7.9586716 9.8481868 0.2980717 7.3855441 5.9029442 NA 3.5204725 10.0794410 10.2551833 10.5773050 12.0220267 10.2566341 11.8928725 0.7130799 12.2402293 14.1418389 9.6995369 9.8609470 11.9641574 11.1594268 4.5204725 4.8830440 9.0168996 12.2993723 0.7130799 11.2931418 4.4135602 4.4680033 3.4680098 10.4135585 12.2341058 10.5976710 11.6545333 13.0320147 8.1928994 10.9035609 10.8670983 11.4779904 11.6079366 5.3855449 12.5618396 10.6482839 NA 10.3921591 8.8767686 4.5072745 4.0706727 10.9347059 10.1699866 10.0788945 9.5648678 1.5204977 10.1761322 12.9399073 11.3793428 10.5621329 10.1113281 1.05470000 1.06310000 0.21004000 0.23628000 -0.09327100 0.33853000 0.00889200 0.00027728 -0.00843850 -0.00843850 -0.00843850 0.26263000 0.13906000 -0.14811000 -0.14811000 -0.16942000 0.27726000 0.32382000 -0.17120000 -0.05239600 -0.11208000 -0.12720000 -0.12720000 -0.12946000 -0.07787800 -0.07787800 -0.07787800 0.02398700 -0.03149600 -0.03418000 -0.08333300 0.23628000 -0.09327100 -0.09327100 0.33853000 0.33853000 0.00889200 0.00889200 0.00027728 0.22391000 0.22391000 -0.00843850 -0.08647400 -0.08647400 -0.08647400 -0.01835300 0.15108000 0.22530000 -0.16161000 -0.14811000 -0.16942000 -0.16942000 0.27726000 0.32382000 0.32382000 -0.17120000 0.32882000 0.32882000 -0.11835000 -0.44264000 -0.12720000 -0.12720000 0.20840000 -0.07787800 -0.07787800 0.00000000 -0.11874000 -0.59458000 -0.60534000 0.227 0.227 -0.162 -0.162 0.324 0.324 -0.171 0.329 -0.118 0.888 -0.443 -0.127 -0.127 0.208 0.208 0.000 0.000 0.000 1.055 0.000 0.000 -0.119 -0.595 -0.125 -0.125 0.236 0.236 0.000 0.000 0.339 0.339 0.000 0.000 0.224 0.224 0.000 0.000 0.000 0.000 0.000 0.000 0.227 0.227 -0.162 -0.162 0.324 0.324 -0.171 0.329 -0.118 0.888 -0.443 -0.127 -0.127 0.208 0.208 0.000 0.000 0.000 1.055 0.000 0.000 -0.119 -0.595 -0.125 -0.125 0.236 0.236 0.000 0.000 0.339 0.339 0.000 0.000 0.224 0.224 0.000 0.000 0.000 0.000 0.000 0.000 8.3748969 -1.2870081 4.2366839 10.9124845 11.3549448 7.7958001 12.0882941 8.4074594 8.9543633 1.5204977 11.2653076 10.5404775 3.6673131 2.0350608 3.9225689 8.8085160 2.9610491 9.4350724 11.2114695 11.0832613 9.0816254 7.8085157 8.6702207 10.3983057 5.3130318 4.9225737 0.2980717 NA 11.0313792 7.6319824 5.9892435 7.7845812 6.8058754 11.1103014 11.0687452 6.7410247 8.3533639 NA 8.3130318 12.3202179 9.9359138 7.1477473 NA 7.2366811 8.6230120 5.0529679 3.5710943 NA 3.4135535 5.9327722 2.7131239 10.1745983 NA 7.1477473 10.6394149 9.8905383 5.5957632 10.3442959 11.1506109 6.9515237 2.8830342 1.2980717 12.2306652 2.6199998 NA -1.2870081 -0.2868321 13.384192 3.520473 8.504282 12.946813 10.423495 10.692544 13.539866 12.942689 9.088158 11.020035 13.011253 9.841758 9.016900 8.834652 1.713124 7.673121 11.387753 11.1330790 12.4970379 8.2657880 13.7265261 9.0837955 3.1725515 9.5888683 8.2209137 10.6656090 6.3996189 8.7872604 11.1674181 5.7792072 1.7131239 11.4107381 6.4410385 6.9971332 9.7060572 9.9328924 11.0183256 8.5570397 8.2464485 12.6245108 3.6200116 11.6797523 10.5773050 10.7271394 9.9539102 11.6153055 9.4969356 9.7852514 10.8942711 9.1786853 NA 9.4573472 7.2286215 12.2993723 3.8424057 11.2931418 5.3424765 10.6604965 10.4135585 7.3055757 13.9060281 9.9509263 10.2054728 12.8688067 10.3529118 0.2980717 NA 10.5869475 10.7455090 10.2590486 TCGA-E2-A15H 38 0 NA 393 breast stage iia t1c n1mi m0 female 2009 NA no infiltrating ductal carcinoma 1 white not hispanic or latino 1 1 1 NA 6 1 3 1 6 9 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.040392e-07 34.6153846153846 15.3846153846154 3.84615384615385 26.9230769230769 19.2307692307692 10.6986802 9.7814917 11.7526751 8.9686841 8.7270440 9.5188530 10.1389954 10.0465037 9.8011472 13.8054519 10.7728904 10.9376447 1.6867470 16.0004698 3.4416428 9.9125641 6.7091224 8.4163749 8.6394956 12.9256067 4.0443067 14.2638289 3.0086841 9.2249430 11.4233675 8.6453068 3.7742178 9.9125641 10.5271387 3.4941083 7.5876208 7.0876336 NA 3.8566770 9.7440691 10.5133026 9.1885913 10.6835807 9.5053364 11.0812168 2.4941083 11.4116943 15.0046967 8.5882998 9.5029378 11.1085560 10.5792970 4.8962089 -0.3132978 9.0887003 10.2181356 NA 10.9456146 3.8962040 4.3591768 4.2103187 10.6413140 11.9571955 10.4586563 12.1364187 12.5266468 7.7608956 11.1538502 10.8187140 10.9016804 10.6958829 4.4416428 11.7903698 10.7791810 0.6867918 10.3644738 9.2112958 2.9399788 3.8160364 11.2100711 10.6765034 10.9323068 8.7978897 2.0086662 8.3014642 12.5597175 11.5667202 10.5513272 9.3115497 0.74575000 0.74575000 0.00708290 0.00917080 -0.33067000 0.02707600 -0.23924000 -0.68524000 -0.70980000 -0.69260000 0.70251000 0.00077943 0.00077943 0.00708290 0.00708290 -0.01950100 0.03848900 0.02286700 0.02932500 0.05922300 -0.30251000 -0.63925000 3.65690000 3.65690000 -0.60999000 -0.64243000 -0.64243000 0.11580000 -0.65650000 0.04897200 -0.31780000 0.01112100 -0.31576000 -0.33067000 0.02707600 0.02707600 -0.23924000 -0.68524000 -0.68524000 -0.16663000 -0.20440000 -0.72623000 -0.68606000 -0.68606000 0.02244500 0.02244500 0.00077943 0.01209700 -0.00027551 0.00708290 -0.01950100 -0.05212600 0.03848900 0.02286700 0.05409100 0.02932500 0.05922300 0.05922300 -0.31708000 -0.31304000 -0.63925000 -0.58009000 0.04160000 -0.60999000 -0.64243000 0.11580000 -0.67334000 -0.65482000 -0.66772000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.303 0.000 -0.305 -0.639 0.000 0.000 0.000 -0.642 -0.642 0.000 0.697 0.116 0.116 -0.306 -0.655 -0.295 -0.295 0.000 0.000 -0.331 -0.331 0.000 0.000 -0.239 -0.685 -0.167 -0.167 -0.688 0.000 -0.686 0.000 -0.151 -0.151 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.303 0.000 -0.305 -0.639 0.000 0.000 0.000 -0.642 -0.642 0.000 0.697 0.116 0.116 -0.306 -0.655 -0.295 -0.295 0.000 0.000 -0.331 -0.331 0.000 0.000 -0.239 -0.685 -0.167 -0.167 -0.688 0.000 -0.686 0.000 -0.151 -0.151 8.3342125 NA 4.1461827 11.1187740 13.4249520 6.9778329 11.7555324 8.3834434 7.7128901 0.2716647 10.9494363 11.4286508 2.9346863 4.7742178 2.4941083 7.6725958 3.3871971 10.0415544 11.5994564 11.3480869 9.8128133 1.0087020 8.1523203 10.7132776 5.3449669 3.5447327 2.0086662 NA 10.1224244 6.5133028 6.2336484 8.6453068 5.8263044 10.8936098 10.6321980 0.2716647 8.5632710 NA 6.9107554 12.2054073 8.7514969 6.7952786 NA 6.9905351 8.0131836 -0.3132978 3.7311507 NA 3.3871971 5.0266053 2.3871971 11.0338218 0.6867918 7.3662339 10.6438562 10.0844288 4.0086841 9.8968166 11.7629017 6.9675249 3.8160364 2.2717245 11.7546926 3.2103109 NA 0.6867918 1.6867470 13.297375 5.915573 8.735241 16.000470 10.750823 11.238462 12.925607 13.030773 9.187596 11.004732 13.304566 11.309721 9.088700 6.587622 3.330616 9.833323 11.521028 11.4220986 13.0450619 6.3941128 13.7753759 9.5196441 5.1461868 8.9939551 8.3288060 11.1711567 5.2566107 9.3179313 10.7728904 6.1130191 3.7311507 10.8253459 7.9859620 8.2828878 10.8560528 9.9950931 10.5613513 9.6547008 9.7748798 10.9970829 6.0443067 11.7999021 9.1885913 10.8153930 10.5834649 10.8437853 9.5509403 11.3861097 11.0044494 9.4713891 -1.3132978 9.9488667 7.2566097 10.2181356 6.3732549 10.9456146 6.9859626 10.8669741 10.6413140 7.8765790 14.2752638 9.7440691 10.2152083 12.0130432 10.1109204 -0.3132978 NA 10.5192486 10.1441350 10.0437562 TCGA-E2-A15I 44 0 NA 1692 breast stage iia t2 n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 3 1 4 3 4 4 3 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 2.392901e-06 9.710324e-07 7.21649484536082 8.24742268041237 11.340206185567 18.5567010309278 54.639175257732 11.3836818 10.0869943 12.3089181 10.1389931 8.3205221 9.5127685 11.4927479 9.6248073 8.6971931 13.2831785 11.3091189 10.7069824 6.8296644 13.1423789 4.1991855 9.4874329 5.9825647 9.0865256 10.7024020 13.3827755 3.7081983 14.4008877 9.1631955 8.6038318 10.9966000 7.3905318 0.0836559 9.7179166 8.2266684 1.8206896 8.2043804 6.9123756 -0.5012385 4.4529446 10.5742273 10.4011232 9.7233527 11.7906383 10.5179914 12.7131432 11.9747348 11.0844149 13.6190265 8.1806715 10.2640342 11.3540060 11.6201198 5.0533373 0.8206487 8.7383467 12.6120833 -1.5014428 11.8505156 5.4056384 7.1497999 4.1711748 10.6642833 12.2108452 10.4803154 12.0820660 13.3793361 7.5458719 10.9181817 11.2219376 11.8339989 11.5936506 5.3567284 12.1337860 10.5022660 -1.5014428 9.9860858 9.0837107 5.0865630 5.8737886 10.2792879 10.9714389 10.3575063 10.0055516 4.1711748 10.6830036 13.0133389 13.5543271 10.3089180 10.1996213 0.01070300 0.00642460 -0.01147300 -0.01147300 -0.01601700 -0.01202400 -0.00443120 -0.00443120 -0.01601700 -0.01601700 -0.01601700 0.00666530 0.00666530 0.00350030 0.04514100 0.00141690 -0.00138580 -0.00138580 0.74518000 0.47032000 -0.02151000 -0.00843850 -0.00843850 -0.00843850 0.04982400 0.04982400 0.04925600 0.02876300 0.05965100 0.01070300 -0.00990460 -0.01147300 -0.01601700 -0.01601700 -0.01202400 -0.01202400 -0.00443120 -0.00443120 -0.00802440 0.47821000 0.47821000 -0.01601700 -0.01186100 0.00000000 0.00000000 0.00000000 0.00666530 -0.00180860 0.00350030 0.04514100 0.00141690 0.00141690 -0.00138580 0.01474900 0.01474900 -0.01739100 0.49286000 0.49286000 -0.02151000 -0.51105000 -0.49110000 -0.00843850 0.00097064 0.04982400 0.04925600 0.02876300 -0.01388100 -0.47997000 -0.47997000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.000 0.850 -0.511 -0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.478 0.478 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.493 0.000 0.850 -0.511 -0.483 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.478 0.478 0.000 0.000 0.000 0.000 0.000 0.000 8.3551736 NA 3.8206794 10.2448425 11.0516573 7.0370538 11.9863370 9.0642025 8.6195561 1.0837240 11.7328171 10.0953618 2.4056384 3.5862123 3.7081983 8.1676329 3.8910692 10.4856568 11.3181289 10.6664798 9.2402151 1.3060872 7.9683897 9.8699803 7.0417796 3.7081983 0.4987615 NA 11.2017865 9.2519650 7.3752654 8.0930726 5.9081380 9.9965152 10.4810287 5.6484942 7.7203352 -1.5014428 7.4674148 11.9388387 9.9970987 5.8650701 NA 1.0837240 7.3442382 5.5967801 2.8910692 2.4056384 7.0340231 6.5451622 4.0223057 9.7299694 -1.5014428 8.5928259 10.6727375 9.4405293 4.7841480 10.5852162 12.1637509 7.9926036 3.0837069 3.6686751 11.2634124 1.0837240 -1.5014428 1.8206896 0.8206487 12.475565 3.253641 8.786460 13.142379 11.166525 9.628675 13.382776 12.538695 9.544672 11.086760 13.377326 9.374497 8.738347 8.298030 1.083724 7.588861 12.094472 11.142604 12.975558 8.138993 13.891500 9.352837 7.369113 9.193976 8.255304 10.884654 7.375265 7.966354 11.309119 5.617689 1.306087 12.079831 5.171175 5.693111 10.473163 10.618013 11.202868 8.621576 8.120800 11.882047 7.076177 12.059432 9.723353 11.011982 9.674921 11.840823 9.774873 10.678346 10.715191 9.262790 -1.501443 9.550236 9.449807 12.612083 7.334799 11.850516 7.420589 11.007533 10.664283 7.444192 13.652261 9.903890 10.572555 12.806234 9.950474 1.498761 2.891069 11.032078 11.446385 10.118051 TCGA-E2-A15J 51 0 NA 1640 breast stage i t1c n0 m0 female 2009 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 3 1 2 2 4 1 3 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 5.548757e-07 1.733986e-07 27.2727272727273 18.1818181818182 0 27.2727272727273 27.2727272727273 10.80554454 9.60314135 12.01575979 9.56259294 8.46930400 9.09072034 10.12216485 9.46281654 10.75776401 12.37321873 11.89860940 10.39325777 1.30655390 13.26453584 5.25408378 9.10929996 8.47647769 8.10837652 11.36512450 12.53227675 0.08420036 14.14654394 4.94213912 9.85931534 10.92572481 4.97493306 NA 10.02079845 11.68221296 1.49922085 7.83011459 7.42697586 NA 3.14305050 9.73760261 11.36821336 10.49849332 11.55583566 10.29604872 11.38660900 12.42484511 11.55193580 15.22973442 7.03174917 9.57734215 9.41133874 11.32475307 4.08415783 5.42993392 8.71473080 10.57768241 NA 11.05282722 4.11390882 4.05378907 5.84792677 10.41283539 12.25450284 11.02691926 11.58284349 13.01360380 7.50482216 11.18547962 10.52187443 11.17801811 11.53193246 5.33208848 13.15629305 11.32872249 NA 10.35912096 9.45775064 3.43513517 4.25408756 11.56124407 10.25617118 10.26986187 9.93434724 0.82113874 9.26241037 13.64481173 12.53210463 9.76305398 9.46281654 1.42100000 1.46680000 -0.01161100 -0.01161100 -0.01680900 -0.02967600 -0.00788630 -0.00788630 -0.83130000 -0.83130000 0.75337000 0.00847430 0.00847430 0.00225310 -0.00041585 -0.00041585 -0.00553750 -0.00553750 0.00597000 -0.00223360 0.01140000 0.00638710 0.00638710 0.00638710 0.00903120 0.00903120 0.00903120 0.01908300 -0.00110870 -0.01491600 -0.00899060 -0.01161100 0.00208050 -0.01422800 -0.02967600 -0.01546600 -0.00788630 -0.00788630 -0.00788630 0.02567100 0.01103800 -0.85039000 0.00166420 0.00166420 0.00166420 0.00166420 0.00847430 0.00847430 0.00225310 -0.00041585 -0.00041585 -0.00041585 -0.00553750 -0.00553750 -0.00553750 0.00597000 -0.00223360 -0.00223360 0.01140000 -0.83970000 0.00638710 0.00638710 0.01419000 0.00903120 0.00903120 0.01908300 -0.09749500 0.03256300 0.03256300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.731 -0.087 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.086 0.745 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.731 -0.087 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.421 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.086 0.745 0.000 0.000 0.000 0.000 8.38794106 -1.50062605 4.17162318 10.85839843 12.10537178 7.19446139 11.85894749 8.10404778 8.51990000 NA 11.88896371 10.95104009 5.39401674 NA 4.05378907 8.53811675 2.40610124 9.83514657 11.37724888 11.47415021 9.71412409 1.08413231 8.27727484 10.13446264 5.62848199 3.82112853 NA -0.50083019 11.30070421 2.30655390 6.03835716 8.99105098 4.28055551 10.22988889 10.92991184 3.78459821 8.60379657 0.08420036 7.89151519 13.62876272 9.62008380 6.60248509 NA -1.50062605 8.96374374 NA 2.95863855 NA 1.08413231 6.48549445 -0.50083019 10.97239635 NA 5.84792677 10.78112796 9.86223750 3.02275840 7.13944289 11.57350670 6.54359177 1.49922085 1.66911750 12.85413600 3.02275840 NA 1.30655390 1.49922085 13.042885 4.784598 9.276453 13.264536 10.298075 11.457569 12.532277 12.924938 9.527104 10.651800 14.067629 11.565287 8.714731 9.244872 3.143051 7.260749 11.247600 11.14620659 12.10837668 7.14305458 13.47781815 9.00699250 1.82113874 9.16453389 8.59854572 10.42416629 5.44171253 7.38184141 11.89860940 3.49919533 -1.50062605 11.88128155 7.32256544 6.14031036 10.63201896 9.72078515 10.73879646 8.82659329 8.31137505 12.82126692 2.49919533 11.92459352 10.49849332 10.25867002 10.31778014 11.41880619 9.83067476 10.05522494 10.85372281 9.13400911 -1.50062605 9.38256675 8.95517242 10.57768241 1.30655390 11.05282722 7.52433720 10.76712872 10.41283539 7.53537181 14.91518723 10.28383278 10.44391005 13.31932704 10.44646964 NA 0.08420036 10.23094126 10.63938865 10.03447339 TCGA-E2-A15K 58 0 NA 275 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino 1 1 1 1 2 2 4 1 1 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 2.774378e-07 19.4444444444444 13.8888888888889 5.55555555555556 38.8888888888889 22.2222222222222 10.231439 9.556946 11.986208 9.065642 8.426608 9.891137 10.399883 9.646477 10.266380 13.356267 11.430214 10.583817 2.614427 13.002785 2.862352 8.795583 5.833599 8.395791 10.001371 13.192096 2.073855 13.782907 6.748857 10.198238 10.503174 7.098247 NA 10.157936 9.735317 1.614427 7.311399 6.006749 NA 4.369320 9.522073 10.527694 10.483639 11.287740 10.032811 10.882388 2.521327 11.032020 14.774026 6.061597 10.112283 11.368692 10.988655 4.722958 NA 8.104279 12.569536 -1.385714 10.772409 4.881219 6.871819 5.591712 10.728499 12.026868 10.310964 10.945628 13.036167 8.832388 10.711475 10.654049 11.206654 11.248788 4.521321 11.739198 9.497074 NA 10.232816 8.726870 3.569090 5.556944 10.821140 9.948145 9.816555 9.590995 2.199405 10.539985 12.984642 11.089404 10.237398 9.794962 0.58274000 1.15640000 0.00249690 0.00249690 0.00388540 0.00694350 0.00000000 0.00000000 -0.63878000 -0.03245000 0.00471900 -0.01664200 -0.00498440 0.00124810 3.23290000 -0.67012000 -0.00705760 -0.00705760 0.00069327 0.58614000 -0.01684100 -0.03472400 -0.03472400 -0.03472400 -0.07187300 -0.07187300 -0.07187300 0.15024000 -0.02294500 0.00416320 -0.01876500 0.00249690 0.00388540 0.00986690 0.00277450 0.00277450 0.00000000 0.00000000 0.00000000 -0.00166290 -0.00166290 -0.68003000 -0.01202400 -0.01202400 -0.01202400 -0.01202400 -0.00498440 -0.00498440 -0.04928900 -0.08373100 -0.64631000 -0.64631000 -0.00705760 -0.00705760 -0.00705760 0.00069327 -0.03871400 0.57237000 -0.01684100 -0.70136000 -0.03472400 -0.03472400 0.00374650 -0.07187300 -0.07187300 0.15024000 0.00138680 -0.04251700 -0.04251700 0.000 0.000 0.000 -0.646 0.000 0.000 0.000 0.572 0.000 0.483 -0.651 0.000 0.000 0.000 0.000 0.000 0.000 1.098 1.098 0.150 0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 -0.624 0.000 0.000 0.205 -0.292 0.000 0.000 0.000 -0.646 0.000 0.000 0.000 0.572 0.000 0.483 -0.651 0.000 0.000 0.000 0.000 0.000 0.000 1.098 1.098 0.150 0.150 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 -0.624 0.000 0.000 0.205 -0.292 8.8635442 NA 4.7018928 10.6105512 11.9836193 6.7192916 11.5633456 8.8384567 9.2671415 3.0738545 10.8501460 11.3742442 4.6588227 0.6144743 2.5213272 8.3009314 4.0406996 11.5717143 10.8818029 11.1944539 9.4031493 4.3957894 8.0280591 10.6992393 7.7045435 5.7437142 4.7229578 NA 10.6737754 4.7229578 5.6144301 7.4314149 4.3423485 10.3978098 10.4708564 4.5686280 9.8036378 NA 5.8812168 12.3325356 8.6751268 6.8480508 -0.3855257 -1.3857142 8.6158393 NA 4.3693199 NA 7.1261841 5.4473213 4.2291418 10.7164066 -0.3855257 8.6312393 10.6378388 9.5407269 5.6912466 10.1814363 12.6532642 7.7768225 4.3693199 4.6367986 11.0995055 3.4217888 -0.3855257 3.6588284 1.1993740 14.189775 5.647853 8.783103 13.002785 10.666727 11.041744 13.192096 12.276766 9.179171 10.514920 12.934738 8.512276 8.104279 8.735964 1.936365 7.680520 11.163734 11.0240870 12.9115621 7.7616357 14.3345137 9.2189841 7.4120922 9.0375470 9.5735273 10.9309076 7.7488570 8.0448837 11.4302144 4.4217888 0.6144743 11.3527343 5.1062855 7.7592930 9.5145431 10.3705703 11.4972650 8.8835576 8.6464766 11.2189841 7.5627980 10.9334679 10.4836392 11.1586709 10.3170365 10.7108167 10.3213586 10.1738080 10.5359000 8.0738625 -0.3855257 8.8529074 7.5757941 12.5695359 8.4409796 10.7724093 6.0322838 10.6050064 10.7284985 7.3693182 13.4816131 10.2636870 9.9176409 12.7860769 10.7310998 6.1379932 3.3148705 10.2351089 10.5492275 9.6608728 TCGA-E2-A15L 65 0 NA 626 breast stage iia t2 n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 black or african american not hispanic or latino 1 1 3 NA 2 2 4 1 3 8 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 6.935946e-08 35.7142857142857 25 0 17.8571428571429 21.4285714285714 10.62661006 9.95759210 11.79277822 9.50330043 8.43911237 9.30366273 10.94013004 9.83999186 10.38644852 8.78731981 10.94853814 10.31056473 -0.64837167 12.82478456 3.67357904 9.30875175 6.37955512 8.28238698 9.60017012 12.66304317 1.35162833 13.15229677 6.47577071 9.47765062 10.90503893 6.76950200 -0.64837167 8.21118454 11.20261778 -0.06340917 8.30001662 6.46539172 NA 4.20963272 10.18453967 10.98736770 10.35164964 11.25327076 9.90959192 11.63314505 1.81110106 10.37990109 15.01888592 9.84904239 10.27014018 12.11112175 11.48382797 3.59957965 4.30584652 9.06846902 11.98407690 0.67355642 11.20398404 7.25553189 4.79459262 4.52157217 10.55377346 11.72723212 10.42244137 13.26547399 13.10361202 8.01342764 11.00157934 10.57542806 11.32391145 11.12355168 4.95156448 12.31571968 9.39809166 0.67355642 10.34988738 9.50710028 3.09312068 5.14606457 10.93872392 10.23848929 9.92529673 9.34033438 4.67357904 9.77686545 12.80105623 12.97906950 9.82129136 9.34741674 6.8447e-01 6.9180e-01 7.2711e-01 -1.0410e-02 -1.3166e-02 1.3954e+00 -9.5823e-03 -9.5823e-03 -9.5823e-03 -9.5823e-03 -5.0243e-03 1.0105e-02 1.0105e-02 6.6252e-03 6.6252e-03 6.6252e-03 3.0122e-03 -1.7856e-04 -1.4681e-02 0.0000e+00 7.1504e-01 3.1955e-02 3.1955e-02 3.1955e-02 3.6330e-02 3.6330e-02 3.6330e-02 3.0129e-02 1.4491e-02 1.4491e-02 -8.0505e-03 -3.0874e-03 -1.3166e-02 -1.3166e-02 -3.0443e-02 6.8044e-01 -9.5823e-03 -9.5823e-03 -1.7019e-02 -6.9593e-03 -6.9593e-03 -9.5823e-03 1.0663e-02 1.0663e-02 1.0663e-02 1.0663e-02 1.0105e-02 1.0105e-02 6.6252e-03 6.6252e-03 6.6252e-03 6.6252e-03 3.0122e-03 -1.7856e-04 -1.7856e-04 -1.4681e-02 1.1639e-02 1.1639e-02 1.8063e-02 -7.1719e-01 3.1955e-02 3.1955e-02 -3.9939e-05 3.6330e-02 3.6330e-02 3.0129e-02 5.2348e-03 3.6753e-02 3.6753e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.670 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.670 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.394 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.98555308 2.43911777 5.89854456 10.41773882 11.37800016 7.45889297 11.54008390 8.50871862 8.63108609 -1.64837167 11.68256649 10.91608972 0.93659083 1.15898325 3.77791412 8.73535395 3.35165659 8.92340237 11.29526333 11.05468801 9.29636173 4.07956585 8.27497724 10.07445713 6.70037729 5.06589538 0.35162833 NA 11.19498186 6.42846570 7.16222112 8.24798209 5.82738209 10.23827981 10.37644299 1.35162833 8.61021578 -0.64837167 7.10653677 12.75092754 8.81925528 6.93661203 -1.64837167 5.18453818 8.44572712 NA 4.28238791 NA 1.93662852 6.62086935 -0.64837167 10.45592072 -1.64837167 5.15900344 10.12643668 9.74396695 3.56110614 10.54270882 11.48141560 7.76950200 3.25853400 3.59957965 13.88710726 3.43911777 NA 0.35162833 -0.06340917 12.683855 4.906236 8.626610 12.824785 10.209879 10.741819 12.663043 12.874721 9.231998 10.768711 13.730656 10.451655 9.068469 8.726689 4.234294 7.639362 11.461643 10.9891802 12.0758437 7.9441065 14.0423016 8.8294078 3.4391178 9.1654309 9.4731832 10.2248631 5.7179725 7.5039346 10.9485381 5.6277732 3.9062364 11.2088531 7.4337991 7.0877132 11.3373137 9.7519954 11.0492688 8.3628771 8.2897589 11.7675234 3.3960499 11.2727914 10.3516496 9.9196057 9.7992494 11.3898828 8.6803247 9.9823717 10.3498874 9.2502510 NA 9.5903350 10.0999348 11.9840769 6.0098622 11.2039840 8.2297004 10.5365249 10.5537735 7.3058456 13.8617647 10.2513842 10.5677892 13.1344431 10.0603024 -0.6483717 NA 10.3840398 10.6934464 9.6920561 TCGA-E2-A15M 66 1 336 NA breast stage iia t2 n0 m0 female 2010 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 2 2 4 NA 2 3 6 4 4 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 1.525908e-06 5.895554e-07 18.0327868852459 32.7868852459016 8.19672131147541 21.3114754098361 19.672131147541 10.97822903 10.52351021 11.70863008 9.85124916 8.24224665 9.72225801 9.27863739 10.49739741 8.50642700 10.92182249 10.84317219 10.86120208 0.04460395 13.28112070 4.09765293 9.09384245 4.11492500 9.24666223 9.88185088 12.61211427 1.04453401 12.99556806 3.47749601 9.19326908 9.98881120 5.14046375 0.30754510 9.58238966 11.09465913 2.72261903 8.82851893 8.07244456 NA 5.45053165 10.30804238 11.19212492 9.88405708 11.25472264 10.41522585 11.37567927 0.30754510 11.43771431 14.37931447 8.62432209 8.82786411 11.22245616 11.19441251 5.35923651 2.36647609 10.04819681 11.97261257 -1.27753398 11.44744385 6.81272283 8.29531069 5.52350864 10.97512787 12.13980355 10.63231593 11.95045183 13.14900610 6.82851861 11.03265499 10.49466501 11.67925871 11.26019271 5.84155051 12.20327431 11.18664546 1.52997083 10.00916813 9.55747634 3.63214023 7.07796182 10.61135352 10.71430932 9.80176170 10.63287827 3.47749601 7.56653130 13.01952651 12.14723590 10.22320327 8.82392956 0.3996100 0.9253300 0.0390540 0.0147490 -0.0780110 0.4391900 0.1869200 0.1869200 0.2951700 0.2951700 0.5620500 0.2741100 -0.0138620 0.2621600 0.7617800 -0.2240000 -0.1593700 -0.0313590 -0.1801700 0.0310140 -0.0231550 -0.2452900 -0.1190000 -0.1190000 0.2262300 0.2262300 1.6130000 0.5225800 -0.0094046 -0.0094046 0.0366530 0.0390540 -0.0780110 -0.2171900 0.4391900 0.4391900 0.0840520 0.1869200 0.1869200 0.2772600 -0.1611500 0.0209030 0.0249690 -0.0953840 -0.0953840 -0.0953840 -0.0138620 -0.0138620 -0.2815600 0.2621600 -0.2240000 -0.2240000 -0.1486200 -0.0313590 -0.0313590 -0.1825300 -0.2455700 -0.2401500 -0.0231550 -0.2232900 -0.2452900 -0.1190000 0.2801000 -0.3203000 0.6710400 0.0000000 0.2728500 0.2566800 -0.2456900 0.000 0.000 0.046 -0.216 0.000 0.000 -0.183 -0.240 0.000 0.362 0.149 -0.245 -0.245 -0.213 -0.213 0.631 0.631 0.000 1.016 0.000 0.523 0.252 -0.251 0.000 0.000 0.000 0.000 0.000 0.000 0.392 0.000 0.187 0.187 0.116 -0.161 0.000 0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.046 -0.216 0.000 0.000 -0.183 -0.240 0.000 0.362 0.149 -0.245 -0.245 -0.213 -0.213 0.631 0.631 0.000 1.016 0.000 0.523 0.252 -0.251 0.000 0.000 0.000 0.000 0.000 0.000 0.392 0.000 0.187 0.187 0.116 -0.161 0.000 0.514 0.000 0.000 0.000 0.000 8.0987359 5.1820407 6.0126290 9.2129598 10.8268814 5.8399948 10.1017178 10.0958072 8.0876644 1.9705224 12.4532927 11.6498957 2.2461648 2.8518989 3.5805917 8.6862288 4.5555033 11.4277026 11.7201427 10.6204557 8.7704158 2.7669979 8.7254252 9.6440794 8.4213150 8.9068656 2.1149333 NA 11.6464949 7.8862599 7.4020903 7.7112953 6.0354941 9.3598102 10.9642956 6.7940727 8.0218184 -0.2773591 8.2174658 12.4261895 8.3038109 7.1213543 -1.2775340 5.8570355 8.7324388 1.3075451 4.5929772 -0.6924549 8.2333743 6.1847861 4.6651255 10.3943724 -2.2771843 9.8272090 10.5401936 9.9873462 5.9514293 10.8826392 13.8059026 10.2632227 3.9320612 5.4774992 10.4749909 1.5299708 NA -0.6924549 1.6295198 12.2755969 7.2539921 8.1160008 13.2811207 10.5471713 11.1833221 12.6121143 11.3760152 8.9047252 11.1946664 13.2708603 10.1835781 10.0481968 9.1593219 -0.6924549 7.8087467 11.8959751 10.6159118 10.7160795 7.4213150 13.4721383 9.3363997 8.6724370 8.0591167 8.7120049 10.2301894 8.1541077 8.4965738 10.8431722 6.2695045 4.0263929 10.9064007 5.7670032 7.5374172 11.1087422 11.1794780 10.5062225 8.1993563 7.4385723 12.8912433 8.0646851 11.9917772 9.8840571 10.8317880 9.4204466 12.0620428 9.6862289 11.1883042 10.6424047 9.4221827 1.6295198 8.8118290 8.9938631 11.9726126 7.6052536 11.4474439 7.1717593 10.3736620 10.9751279 7.5154002 13.9162104 10.5786467 10.6516837 12.2924066 9.6223449 5.0976487 0.8269247 10.6179962 10.5145871 9.9232024 TCGA-E2-A15O 89 0 NA 1545 breast stage i t1c nx m0 female 2010 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino 1 1 1 NA 2 2 1 1 1 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.427581e-07 18.5185185185185 14.8148148148148 7.40740740740741 29.6296296296296 29.6296296296296 10.7789662 9.6036176 11.0507708 9.6051450 8.6323664 9.2736436 9.8222937 9.1014355 8.5695974 12.9762244 12.6892813 10.4369365 0.7209788 12.4198962 3.4214118 9.6043814 7.9279889 9.2822626 9.0281754 12.9951342 4.5283275 13.6950305 3.5283338 10.3744510 11.3215843 5.0429026 NA 8.5805092 9.8871376 1.0429244 8.6097177 5.4074751 -1.2789336 3.0429069 9.9539949 10.5890253 10.2173290 11.0034838 10.2917790 11.2939115 3.3059413 12.1065673 13.8298256 9.2992811 10.4035258 11.8489688 10.9918538 3.6278636 3.1132838 8.1282424 11.8786372 NA 10.6051450 4.2128261 5.0785244 4.2755658 8.9181912 11.9194196 10.3889730 11.4127180 12.9165774 7.6546654 10.7944467 10.8418603 10.8605259 10.5331518 5.1639173 10.7339482 11.3361443 NA 10.3045275 9.7356924 3.6336288 4.6278636 12.3385568 9.9255457 10.7107238 10.9015053 7.7598935 9.7244924 12.7116103 10.5793441 10.1181143 10.1545599 0.00013863 0.00013863 0.00541390 -0.78522000 0.75299000 -0.00954260 0.00527490 -0.00968060 3.65690000 0.00889200 1.55930000 -0.01092200 0.00027828 -0.01147300 3.65690000 -0.78387000 0.76063000 0.74005000 -0.78808000 0.00000000 0.00138680 0.02146300 0.02146300 0.02146300 0.02244400 0.02244400 0.02244400 0.75796000 -0.75857000 0.00013863 -0.00539920 0.00541390 -0.00761010 0.04698400 -0.00954260 -0.00954260 0.00527490 -0.00968060 -0.00968060 0.02216400 -0.01003100 -0.01133500 -0.01615400 -0.01615400 -0.02111500 0.00110930 0.00027828 0.00027828 -0.01147300 -0.76775000 -0.79505000 0.00083195 0.76063000 0.74005000 0.74005000 -0.78808000 0.00000000 0.00000000 0.00138680 -0.80285000 0.02146300 0.02146300 -0.01009400 0.02244400 0.02244400 0.75796000 0.57380000 -0.77048000 -0.77048000 0.000 0.000 0.000 0.000 0.740 0.740 -0.788 0.000 0.000 0.660 -0.804 0.000 0.000 0.693 0.000 0.000 0.000 0.000 0.000 0.758 0.758 0.574 -0.770 0.000 0.000 0.000 0.000 0.000 0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.497 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.740 0.740 -0.788 0.000 0.000 0.660 -0.804 0.000 0.000 0.693 0.000 0.000 0.000 0.000 0.000 0.758 0.758 0.574 -0.770 0.000 0.000 0.000 0.000 0.000 0.706 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.497 0.000 0.000 0.000 0.000 8.5427487 NA 5.8808447 10.9641485 11.3345338 7.6055114 10.0161695 7.6102963 8.2866857 -1.2789336 11.2547909 11.2655913 4.1804025 4.3356833 5.0247541 8.4214144 4.0785244 9.7964537 10.6282407 10.8849386 9.2860765 1.3059122 8.5218744 9.8386176 5.6634898 5.3648315 1.8909136 NA 10.5015143 7.5121376 8.3666330 7.9689018 8.0719139 9.8500643 10.4850167 2.8084468 9.7075277 NA 5.5913383 11.4601222 8.4858462 6.3283051 NA 6.8808459 7.9783621 3.1132838 3.8909038 4.9689018 4.2755658 4.5849144 2.1804025 11.0121452 -0.2791087 6.9593795 10.3684329 9.9953527 5.3059377 9.8890197 12.1918875 7.3648307 4.2128261 3.5789508 13.2366743 1.5283213 NA 3.3059413 0.7209788 16.432535 5.421415 9.873259 12.419896 9.811087 10.193665 12.995134 12.757320 8.838617 11.421197 12.391520 10.348508 8.128242 7.087296 1.042924 7.531546 11.509693 11.2245518 12.0108493 8.6472706 13.1265122 9.1014355 5.4214152 10.5279268 9.6729876 11.0526557 6.0608234 7.9712728 12.6892813 4.7433426 -0.2791087 10.4858461 9.0485272 7.8092061 9.1793812 10.0900265 10.6907208 9.3693321 9.0224707 12.0723279 5.2445370 12.6523076 10.2173290 10.8563632 9.5226829 8.0697027 9.7280018 9.6112388 11.1033283 8.3171643 NA 8.5140414 5.3167178 11.8786372 4.4214118 10.6051450 5.2287687 10.6494929 8.9181912 7.4254316 13.4124999 9.7924368 9.3942837 12.2556421 11.0049310 1.0429244 -1.2789336 10.5006938 10.1197183 10.0000046 TCGA-E2-A15P 61 0 NA 595 breast stage ia t1c n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 2 1 NA 4 3 3 4 4 4 6 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 6 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.733986e-07 25 20 0 10 45 11.1952067 10.3249420 12.4085241 10.4262827 8.4104115 10.0084684 11.2265274 9.0622769 9.0541284 12.9068225 10.2471447 10.5963672 4.2182620 13.6472087 4.0376897 10.4127308 7.2471443 8.8940131 7.9219635 12.8212899 0.9381729 13.4320826 6.8688929 9.4869665 10.9314985 9.0965850 -0.8690691 8.8595717 12.4275019 2.5902427 7.3881887 7.2881481 0.1307991 5.0011672 10.7950258 9.9337209 10.7181095 10.8469771 9.7701414 12.5814321 -0.2841945 11.8077495 14.4885933 7.6809706 9.9325092 12.0850880 11.5139650 4.9381540 1.1307991 9.5876686 11.5629511 -0.8690691 10.5147750 3.8856915 4.8312388 4.3007241 9.9373504 11.6723814 10.3107099 11.9196210 13.1481312 7.8085202 10.7787089 11.0224952 11.2529817 11.6599872 5.6464997 12.5446931 11.1576700 -1.8693327 10.2674715 9.1989071 4.2611171 4.4345815 10.7829735 9.6543627 10.4501907 10.3323121 3.0376985 10.6027299 13.0441577 12.2195890 10.7227905 9.9609198 0.00000000 0.00000000 0.00360760 0.00069327 0.00546630 0.00805670 0.00513590 -0.63415000 0.00708260 0.00708260 0.00708260 0.00388540 -0.63389000 0.00332990 -0.00221680 -0.00221680 -0.63859000 0.00177650 -0.62532000 -0.62131000 0.00000000 -0.01298900 -0.01298900 -0.01298900 -0.02903800 -0.02903800 -0.02903800 -0.00110870 -0.00788630 -0.62408000 -0.01285100 0.00360760 0.00546630 0.00833510 0.00329410 -0.00079404 0.00513590 -0.63415000 -0.63415000 0.00124810 0.00124810 0.00708260 0.00541390 0.00541390 0.00541390 -0.00391080 -0.63389000 -0.63389000 -0.00304750 -0.00221680 -0.63821000 -0.65223000 -0.63859000 0.00177650 0.00177650 -0.62532000 -0.63958000 -0.64790000 0.00000000 -0.64321000 -0.01298900 -0.01298900 0.00958830 -0.64959000 -0.02903800 -0.00110870 0.00569190 -0.65221000 -0.65221000 0.000 -0.634 -0.622 -0.622 0.000 0.000 -0.625 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 -0.154 -0.154 0.000 -0.634 -0.622 -0.622 0.000 0.000 -0.625 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.652 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.634 0.000 0.000 0.000 0.000 0.000 0.000 -0.154 -0.154 8.8672027 -1.8693327 5.3499703 9.9529733 11.3234018 7.4339192 12.3114093 9.5624603 8.6220225 2.7746500 11.2404682 11.3020401 3.0849997 4.6699622 4.0376897 8.7555963 2.5902427 10.7411336 11.7553678 10.7150586 9.4219714 7.1941954 8.4150467 9.2741841 6.0376919 5.8587221 0.4527009 NA 11.2889371 7.4971229 6.1080811 8.4402770 7.0164974 10.4907260 10.2403050 3.9121612 8.1806492 NA 8.2741838 12.1798835 10.1918344 6.5943246 NA 6.3107091 7.9621082 5.1080811 4.5231165 -1.8693327 4.6853908 5.2122036 2.6543668 10.2146125 NA 9.5391305 10.8638161 10.0053979 4.9252162 10.0388181 12.8656691 7.9934383 1.9381729 2.6543668 11.8742678 0.1307991 NA -0.8690691 0.4527009 12.841069 4.938154 9.511803 13.647209 10.227186 10.615372 12.821290 13.219258 9.431153 10.666319 12.800073 9.648962 9.587669 8.298219 -1.869333 7.926840 10.966851 11.3849436 12.6763686 6.9445821 13.9471580 8.6660763 5.7232582 8.8688929 9.0286462 10.7628918 6.1080811 6.1587066 10.2471447 6.3353725 2.3007388 10.8686818 5.4345815 6.7446267 11.1018053 10.7662922 10.1593976 8.1152190 8.4138889 13.2695525 6.4208192 12.4590549 10.7181095 10.0003946 10.3313928 10.9733475 9.7422867 10.9055878 11.0187829 9.0466801 0.4527009 9.0815023 6.5733715 11.5629511 6.7082300 10.5147750 6.7710457 10.7098810 9.9373504 7.6385952 12.9998644 10.2732269 10.1290386 13.0233910 9.4402770 1.5902427 1.3007095 11.0620923 10.3091544 10.4388554 TCGA-E2-A15R 64 0 NA 1732 breast stage iia t1c n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 1 1 1 NA 2 2 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 9.710324e-07 3.121176e-07 37.8378378378378 24.3243243243243 8.10810810810811 13.5135135135135 16.2162162162162 11.1382120 10.2083424 11.6158101 10.0232379 8.5028604 8.0555720 10.2567055 8.6625352 10.1394192 13.2586511 10.9205924 10.5415014 0.7233401 12.9463000 4.2558708 8.2899737 6.8289095 8.5840192 4.7986623 13.1015157 3.8702167 14.2179099 1.2379308 9.6465801 11.7227718 9.7944550 NA 9.6435159 8.1816358 3.3422845 9.9415065 6.0087782 -0.4989940 3.7233729 10.0915704 10.0248719 10.8189611 11.7819473 9.3615530 12.4505061 2.5598833 10.1027540 14.4746508 8.6364789 10.3922582 12.8486508 11.6019741 3.2735756 7.2536424 8.8274129 9.9518509 NA 10.6885416 10.7356012 2.7739963 3.0859515 9.5924187 11.4158667 9.8285359 11.3766047 13.0764832 8.5316505 12.1459661 11.6092398 11.2407639 10.8406477 5.5159332 11.2891578 12.0656092 -1.0840585 9.9394286 9.7863855 4.5183085 3.2735756 9.9518509 9.3496063 10.6589617 11.0517301 2.5009805 9.4444749 10.8365598 10.2286202 10.4713289 8.6025215 0.82686000 -0.85790000 0.00000000 0.00000000 0.00041593 -0.00443120 0.00736090 -0.85908000 3.65690000 3.63530000 0.00346870 -0.85750000 0.01300600 1.53450000 3.65690000 -0.85821000 -0.00166290 -0.00166290 -0.85281000 -0.00443120 0.02104300 0.00402430 0.00402430 0.00402430 -0.02677500 -0.02677500 -0.00595220 0.73511000 -0.84387000 0.82686000 -0.00968060 0.00000000 0.00041593 0.00041593 -0.00443120 -0.00443120 0.00736090 -0.85908000 -0.87393000 0.38485000 0.80694000 -0.87408000 0.00944910 0.00944910 0.00944910 0.00944910 0.01300600 -0.85137000 1.50890000 -0.86334000 -0.85821000 -0.85821000 -0.00166290 -0.00166290 0.01684500 -0.85281000 0.01447000 0.01447000 0.01014600 -0.85588000 0.00402430 0.00402430 1.66750000 -0.02677500 -0.00595220 -0.00373950 -0.02258200 0.03467700 0.03228100 -0.857 0.000 1.550 0.703 0.000 0.000 -0.853 0.000 0.000 -0.338 -0.848 0.000 0.000 0.000 0.000 0.000 0.000 -0.027 -0.027 0.000 0.735 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 -0.859 0.376 0.807 -0.874 0.142 0.000 0.000 0.000 0.000 -0.857 0.000 1.550 0.703 0.000 0.000 -0.853 0.000 0.000 -0.338 -0.848 0.000 0.000 0.000 0.000 0.000 0.000 -0.027 -0.027 0.000 0.735 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.859 -0.859 0.376 0.807 -0.874 0.142 0.000 0.000 0.000 0.000 8.43762142 NA 4.30833903 10.28370860 10.97789823 6.70825760 10.55852384 10.13915967 8.67766327 1.23793077 12.17502842 11.32559739 5.02454575 3.69738463 4.73619896 8.87602266 4.30833903 7.65411327 11.28316251 11.34804066 9.69615035 1.61645180 7.63882830 7.57423248 4.68420720 1.82289327 NA NA 9.69901904 8.57868931 4.65748567 7.76933008 7.99683839 10.18112890 10.72015181 3.77400687 8.37237537 NA 7.28452709 12.34771426 8.19910939 6.18280749 -0.08390558 8.09717306 7.35896410 -2.08375268 3.04530317 NA -0.08390558 5.69330853 0.50100595 9.58977154 -2.08375268 6.66421402 10.33650745 10.23117041 2.72338381 9.40335848 11.70718370 5.88180409 1.91601797 1.91601797 12.20351677 9.57913413 NA 3.72337289 0.50100595 15.078534 6.407874 9.731004 12.946300 9.126710 9.623380 13.101516 13.573590 8.472527 11.182807 12.569762 11.345820 8.827413 6.095931 -0.498994 6.887564 11.114619 11.3299131 11.9374346 8.3147645 16.2668428 9.4459394 3.1254693 10.4529965 9.9202413 11.0934948 5.2197997 8.4981627 10.9205924 6.0708380 2.3083317 11.3651695 4.5884448 7.7512501 10.1988196 9.8850475 11.2226521 10.3493089 9.6846187 11.6865815 2.3083317 10.1183804 10.8189611 10.8214078 9.2048868 11.6776759 8.8055246 11.0995011 10.8981231 9.0752615 4.5742347 8.4588880 7.1421203 9.9518509 3.2379461 10.6885416 6.4474023 11.1363991 9.5924187 7.7521498 13.6500678 9.1944703 9.1591947 12.0693353 9.2031559 NA 0.7233401 11.6616951 11.1395700 10.0510887 TCGA-E2-A15S 34 0 NA 428 breast stage iib t2 n1 m0 female 2010 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 1 1 1 NA 2 2 1 1 1 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-06 3.81477e-07 4.65116279069767 16.2790697674419 2.32558139534884 44.1860465116279 32.5581395348837 10.3305883 9.6092172 11.3622937 9.7878510 9.7352791 8.1706161 10.1426302 9.7235499 9.5905049 15.0092918 11.8696155 10.5048740 2.1088255 12.9149600 2.9023824 8.7972069 6.5726366 8.3273631 5.3516955 13.8851634 2.3718655 13.8200769 1.9023824 9.2429514 11.5067286 8.9434165 -1.7978644 6.8637279 9.7555788 3.0599263 9.1451970 5.3516955 0.2020102 3.5595040 9.9547483 10.4622810 9.1451970 8.6006931 9.2551967 11.3317155 3.1088422 10.9738516 14.1175021 9.7632947 11.3613478 11.0916436 11.6271654 4.9568373 9.6822348 8.8331266 9.5250043 NA 10.8541222 8.0937334 3.4113991 3.9023920 9.3862050 12.0897413 10.8480581 9.9746764 12.7969738 8.8690611 11.0901219 10.8541222 10.7734651 10.6234884 5.0845916 12.8029658 13.0872645 0.2020102 10.5693642 9.1877915 4.9707938 3.0093113 10.0253168 9.7027914 11.6696824 10.0769309 2.5238881 8.0937334 10.1459293 10.0193329 10.8189577 9.6108099 0.02918400 0.01306400 0.42587000 0.01209700 0.01321300 0.84692000 0.81220000 0.01363200 1.29460000 0.37924000 1.94990000 0.83616000 0.40644000 0.37611000 0.04032600 0.04032600 0.39579000 0.39579000 -0.79945000 0.03538300 -0.00304750 -0.74690000 0.05281000 0.85997000 -0.72676000 -0.34199000 0.40811000 1.34450000 -0.77065000 -0.78100000 -0.76523000 -0.00013862 0.01321300 -0.38817000 -0.01312700 -0.01821600 0.81220000 0.01363200 -0.79059000 -0.37426000 -0.05980700 -0.80712000 -0.78875000 -0.78875000 0.05965100 -0.52532000 0.40644000 -0.80078000 0.01140000 0.04032600 -0.79886000 -0.79886000 0.39579000 0.39579000 0.39579000 -0.59341000 0.02490300 -0.79369000 -0.00304750 -0.78606000 -0.78235000 0.05281000 0.02525000 -0.72676000 -0.32785000 -1.29290000 -0.05401600 0.06537000 0.06537000 -0.354 0.053 0.000 0.000 0.396 0.396 -0.610 0.000 0.000 -0.283 -0.736 -0.747 0.000 0.000 0.000 -0.695 -0.310 0.000 0.000 0.000 0.000 0.000 0.000 -0.307 -0.307 0.000 0.000 0.000 -0.371 0.000 0.000 0.799 0.000 -0.314 0.000 0.107 0.902 -0.789 0.000 -0.156 -0.156 -0.354 0.053 0.000 0.000 0.396 0.396 -0.610 0.000 0.000 -0.283 -0.736 -0.747 0.000 0.000 0.000 -0.695 -0.310 0.000 0.000 0.000 0.000 0.000 0.000 -0.307 -0.307 0.000 0.000 0.000 -0.371 0.000 0.000 0.799 0.000 -0.314 0.000 0.107 0.902 -0.789 0.000 -0.156 -0.156 8.5878120 -1.7978644 4.9568373 11.0458706 11.9170535 8.7314874 10.7634761 8.3548805 8.3838222 1.9023824 12.6819192 10.5468612 2.6613848 1.3718934 5.0221281 8.2394964 5.3618210 8.6407413 11.5745425 11.1819105 9.8262880 1.2019475 8.9635007 10.5216216 6.3363762 3.6282137 -1.7978644 -1.7978644 10.1282454 6.3618210 5.6857664 7.6006935 6.6448931 11.6378619 10.3280086 0.7869309 9.0861200 -1.7978644 7.5791598 12.3271208 9.3019548 7.2436091 NA 8.7944064 8.7680036 2.0093113 4.8166611 -0.7981153 2.7869100 4.2904760 1.0092755 10.9200542 NA 6.8494076 11.1835168 10.4415480 5.8884510 9.2993232 10.9524471 6.2572313 3.0093113 6.7488436 13.7774001 4.2894140 NA -0.2130691 4.5057322 14.694694 6.636578 8.384344 12.914960 9.641780 10.101306 13.885163 12.688659 9.700300 11.162313 12.140059 11.199305 8.833127 7.860161 3.902392 8.491969 12.095915 11.4716606 11.4942711 9.5019072 15.2726033 8.0692285 3.4498783 10.6985536 9.9345410 10.2433828 3.1088422 9.1684550 11.8696155 6.2463435 -1.7978644 9.9572544 8.7990708 8.6554774 9.8588212 10.7269809 9.9659917 8.5349930 8.9601728 11.8750377 2.0093113 12.7775750 9.1451970 10.1998346 10.3019548 11.1861899 8.9783824 10.6495494 11.1861899 8.9534934 4.9701358 8.2796733 5.7411083 9.5250043 3.4113991 10.8541222 4.1792324 11.0855474 9.3862050 6.7057747 12.8885594 9.5238775 9.4528400 11.7339401 9.3674846 0.2020102 1.3718934 10.5387350 9.3453327 9.7338183 TCGA-E2-A15T 65 0 NA 1563 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 1 NA 2 2 1 1 3 1 1 1 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 3.81477e-07 32.258064516129 12.9032258064516 0 29.0322580645161 25.8064516129032 11.07019200 10.27034252 12.63920982 10.51635935 9.10636010 9.07900549 11.15321532 10.50488104 8.57894399 12.98584037 12.35458998 9.32110755 -0.08758006 13.32873775 3.81931053 7.73260297 5.24632447 8.52713369 8.76625326 14.10088407 4.18544636 14.56345701 5.51728514 8.64905135 11.52744050 8.40694647 NA 6.27582839 9.13963883 NA 7.11536416 5.21010438 NA 4.21010828 10.28093046 10.01702273 9.38477641 10.23322456 10.74900045 12.07439565 13.24366755 11.10224856 13.94599040 9.74784287 10.88612134 11.27710586 12.55522785 4.75372754 2.57538495 9.54420735 10.00650169 -0.67254257 10.54451040 5.23435186 3.64938553 4.30474466 10.81605485 11.99079723 9.94630583 11.40477798 13.29931936 8.11862448 11.36929176 11.05250821 11.06238275 11.64798005 5.81127835 12.42820598 11.51078671 -1.67254257 10.05750700 9.28165792 2.72115389 4.10881715 9.69323708 10.53172698 11.00297756 10.73340070 2.02789715 10.04170706 11.66313101 9.83178400 10.59950805 9.44185464 0.8532500 -0.0548610 -0.0089906 -0.0089906 -0.0056757 0.0030522 0.0140510 -0.0204120 1.7417000 0.0351000 0.8001400 0.0262330 0.0262330 0.0155870 1.7184000 -0.8168800 0.0054139 0.0054139 -0.0067813 0.0053706 0.0263730 -0.7997000 0.8172700 0.8172700 0.0373590 0.0373590 0.0373590 0.0393370 0.0454240 -0.0059522 -0.0132200 -0.0089906 -0.0056757 0.8145400 -0.0048234 -0.0099403 0.0140510 -0.0204120 0.0183830 0.0000000 0.0000000 0.8603700 0.0122370 0.0122370 0.0122370 0.0589370 0.0262330 0.0262330 0.0155870 -0.8101300 -0.8339700 -0.8339700 0.0054139 0.0054139 0.0054139 -0.0067813 0.0109820 0.0109820 0.0217750 -0.8225200 -0.7997000 0.8172700 0.0140500 0.0373590 0.0373590 0.0393370 0.0244080 0.0728270 -0.8337300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.807 -0.807 -0.800 0.018 0.000 0.000 0.000 0.000 0.000 0.853 0.000 0.000 0.000 -0.811 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.747 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.807 -0.807 -0.800 0.018 0.000 0.000 0.000 0.000 0.000 0.853 0.000 0.000 0.000 -0.811 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.747 0.000 0.000 0.000 0.000 8.1792105 NA 4.8352571 10.3456617 11.7268730 7.2589965 11.1157720 10.8278528 8.5989246 3.3274574 11.7103557 10.7747902 6.2581985 2.6493855 3.0278972 7.4772086 1.3274574 8.2640996 11.4193927 11.6151739 9.4353325 NA 7.9011088 9.8451309 6.1218774 6.1476405 -0.6725426 NA 9.4618878 9.3560584 3.7197749 8.9856729 5.5562792 10.4823714 11.0722954 1.3274574 8.3813872 NA 6.8470974 11.7778995 8.0016536 7.2192450 NA 6.0139624 8.4016032 NA 2.6493855 -1.6725426 3.3274574 6.6920338 1.3274574 10.1662714 -0.6725426 5.9713182 10.5496526 9.8426685 3.4567405 8.4281240 11.4900102 7.6717576 1.3274574 2.4973824 11.3099204 3.1854384 NA 6.7453140 0.6493855 15.8163899 5.7024996 8.7672923 13.3287377 9.9208526 9.3773101 14.1008841 13.4721994 8.6174803 11.3935507 13.5372575 11.0543183 9.5442074 8.6105498 0.6493855 8.4810135 12.1187262 11.3059933 12.0066117 6.5610817 13.7120075 9.1444451 3.7197749 9.5562801 10.1010129 10.7511001 4.5369170 4.3718585 12.3545900 3.7868891 0.9124199 11.1617350 8.8062312 6.9559800 9.2743677 9.5179036 10.7341980 9.4873328 8.9114846 12.0853723 4.2343557 11.3899276 9.3847764 10.3425281 8.8675895 12.0899474 9.1380332 10.7781573 10.8791698 9.2990051 -0.6725426 8.0831001 6.2795623 10.0065017 5.5369139 10.5445104 5.1476405 10.8082517 10.8160548 7.5320325 13.2958133 10.2585684 9.2925243 13.2016264 10.2343521 2.2343480 -0.6725426 11.0363298 11.1398394 9.8753201 TCGA-E2-A1AZ 63 0 NA 2329 breast stage iib t2 n1a m0 female 2004 NA yes infiltrating ductal carcinoma 1 white hispanic or latino 2 3 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.179111e-06 5.201959e-07 16 32 12 26 14 9.9862027 10.2814213 11.8544499 10.0671227 8.5909478 8.6541015 8.4526020 10.9598193 9.2978503 12.5552493 10.7892829 10.5909478 0.5853472 12.1157295 1.1703097 7.8891042 8.3335159 9.4339461 7.9819280 5.4182136 1.1703097 9.2822908 7.1010228 9.3047120 10.3267902 4.6727874 0.5853472 8.8660941 11.2014125 3.6727874 8.7376080 8.0811782 10.4526019 4.8332494 9.8947996 12.1660529 10.0157758 10.7905055 10.1636960 12.0385939 2.9072560 7.7947765 14.0823018 9.0537437 8.5131010 11.4308133 11.5690294 4.4922121 -0.4146528 9.4725438 11.5086507 NA 11.7987313 6.1702856 7.7451943 5.5395187 10.3174906 12.2062303 10.1917285 12.0010650 12.4788144 7.0691393 11.4506698 10.9917409 11.5835611 11.6754356 6.2000335 11.6429766 7.8189432 -0.4146528 10.4213735 10.2639234 3.7584524 6.1244812 11.4782454 10.6180577 10.7689586 10.4672019 2.7552508 9.1627521 12.5093934 13.2787013 10.4331635 9.5597379 1.3422000 0.1213800 0.1757300 -0.1983700 -0.0018014 0.2526100 -0.1848400 -0.1960000 0.4992600 0.4992600 1.2937000 0.4849200 0.5285100 -0.2234600 0.1799000 0.1799000 3.1124000 -0.2048600 -0.2483400 -0.1947500 -0.5961800 -0.1840800 -0.1840800 -0.1885200 -0.1474700 1.9239000 0.1949700 0.1841000 0.2432600 -0.1677500 -0.6301700 -0.6002200 -0.1580900 0.0000000 -0.2118100 -0.6080600 -0.1848400 -0.2019500 -0.2443600 -0.2118100 0.3336700 -0.3492700 0.8309600 0.8309600 -0.2173800 -0.1640800 0.5285100 0.6016000 -0.5869600 0.1799000 0.1710600 0.1621400 0.7775300 -0.2062200 -0.2368000 -0.2077200 -0.1980000 -0.1980000 -0.6494500 0.2056400 -0.1840800 -0.1840800 0.1450700 -0.5493500 0.1949700 0.1718100 0.1665500 -0.6026400 -0.5998300 0.485 0.485 0.052 0.180 0.778 -0.205 -0.208 -0.198 -0.596 -0.198 -0.198 -0.184 -0.184 -0.576 -0.576 -0.209 -0.209 0.185 0.185 0.165 0.165 0.167 -0.600 -0.198 -0.198 0.153 0.153 -0.205 0.000 -0.206 -0.206 -0.202 -0.202 0.065 0.277 0.499 0.499 0.645 -0.185 0.000 0.000 0.485 0.485 0.052 0.180 0.778 -0.205 -0.208 -0.198 -0.596 -0.198 -0.198 -0.184 -0.184 -0.576 -0.576 -0.209 -0.209 0.185 0.185 0.165 0.165 0.167 -0.600 -0.198 -0.198 0.153 0.153 -0.205 0.000 -0.206 -0.206 -0.202 -0.202 0.065 0.277 0.499 0.499 0.645 -0.185 0.000 0.000 7.521961 NA 5.044757 10.724235 11.792338 4.411108 9.658126 10.719339 7.112878 3.170294 11.521961 11.346874 4.044753 NA 4.492212 9.578262 4.108884 10.691232 11.485058 11.297850 9.748973 2.170278 10.326790 10.428459 7.629717 6.061057 2.392675 NA 10.630400 4.392681 7.833251 8.507164 6.842711 9.044386 10.641961 4.833249 9.449509 5.139911 8.656786 11.618058 8.823728 6.977641 1.585347 3.585323 7.574008 5.011590 2.755251 NA 7.624242 2.585323 4.392681 10.526371 1.170310 10.734435 10.337704 9.908378 5.607691 10.920155 14.395845 9.067123 5.960363 4.977642 9.646019 3.492212 NA 4.977642 3.170294 10.073816 10.466437 8.654101 12.115730 10.407097 10.588841 5.418214 8.579676 9.433946 13.139432 13.679318 11.874766 9.472544 7.667472 4.044753 7.898206 10.580384 10.8845312 10.8403518 4.8332494 13.4716857 9.3166422 7.8284970 8.0115879 9.8225332 9.9032671 7.8567865 5.9603634 10.7892829 10.7984274 0.5853472 11.8553265 9.0508896 9.3621674 12.5119898 10.4710196 10.5839136 8.4118715 7.6187459 10.7113824 8.0731631 12.2851928 10.0157758 10.0569984 10.1254513 11.6121924 10.0911348 11.5583030 10.7583756 9.6846710 3.3926746 9.2887424 7.4982126 11.5086507 8.3132436 11.7987313 6.7248740 10.6807203 10.3174906 7.7402935 14.0249580 10.6194344 10.8597014 12.3288954 10.1128002 7.0282663 1.7743759 10.9674068 10.3601103 9.6378913 TCGA-E2-A1B0 50 0 NA 1631 breast stage iiia t2 n2 m0 female 2007 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino 3 2 4 4 6 1 2 6 2 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 8.323135e-07 4.161568e-07 27.7777777777778 16.6666666666667 5.55555555555556 19.4444444444444 30.5555555555556 10.4816158 11.2085427 11.6242026 10.0411904 8.8521362 9.3500947 10.3869694 11.2417739 11.0427150 14.1234249 9.8679886 10.6958763 2.5707786 16.8271511 3.6793112 9.2123860 5.0137302 8.5580499 6.0785799 12.1019844 NA 8.4496031 3.5707908 9.4170597 11.4042689 5.8699948 -2.4289543 8.8457463 11.3023169 1.6582343 8.8369867 8.8642573 -1.4293428 5.6845270 10.2553153 10.4463432 10.1987755 10.1634763 10.1857256 11.7359283 10.4612401 9.2991315 15.5749514 8.7668529 8.7000689 12.0616993 12.6294963 4.1854939 -1.4293428 9.1836542 12.2560821 -0.4291485 10.7843457 5.5191519 6.7256035 5.1176784 11.0210949 11.7060141 9.4955982 12.2168381 12.8880924 6.2502662 11.0857464 10.1978773 11.2745812 11.3922608 5.7306563 11.9337569 9.2087691 0.7407117 10.0343101 8.7612278 2.6637545 5.4836739 11.5580498 10.5446624 10.2790075 10.4801163 2.9283324 9.8454551 14.2553289 12.0091878 10.4690093 8.9161909 0.8443500 1.1502000 1.2323000 0.0093098 -0.1357400 1.6439000 0.6011100 0.2142200 1.7748000 3.6569000 3.6569000 -0.0720070 -0.0720070 -0.0102320 0.5988700 0.5988700 -0.0732090 -0.0732090 -0.0316210 -0.2587800 -0.0969680 -0.1277200 3.6569000 0.9295900 -0.0627640 -0.0627640 -0.0627640 0.3149800 0.0570830 0.0785820 0.0610790 -0.0452280 -0.1522100 -0.1377600 -0.2509200 -0.2354500 0.6011100 0.2142200 -0.1231700 0.1194200 -0.1332900 -0.1515700 0.0000000 0.0000000 0.0000000 0.0000000 -0.0720070 -0.0720070 -0.0576540 -0.0150540 0.6102900 0.6186100 -0.0732090 -0.0732090 -0.0732090 -0.0008316 0.0748400 0.0748400 -0.0498300 0.2807400 -0.1201700 -0.2477600 -0.0843950 -0.0062286 -0.0627640 0.3149800 0.6384700 0.2821600 0.2899200 0.000 0.000 0.000 0.599 0.000 0.000 0.000 0.000 0.000 0.292 0.292 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.931 0.315 0.315 0.638 0.282 0.000 0.000 0.000 0.000 -0.138 -0.138 1.139 -0.251 0.539 0.215 0.000 0.000 -0.099 0.468 0.000 0.000 0.144 0.144 0.000 0.000 0.000 0.599 0.000 0.000 0.000 0.000 0.000 0.292 0.292 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.931 0.315 0.315 0.638 0.282 0.000 0.000 0.000 0.000 -0.138 -0.138 1.139 -0.251 0.539 0.215 0.000 0.000 -0.099 0.468 0.000 0.000 0.144 0.144 7.7103374 1.6582343 6.3521459 9.3546025 12.3861691 5.7606095 10.5931535 10.0824495 7.1899056 -2.4289543 13.2715506 11.7543902 3.2146377 NA 3.9458230 8.7084173 3.2987023 10.5327780 11.5484235 10.7704581 9.2325639 -0.8442508 8.1641768 9.7838899 7.4955984 6.3422756 1.3781232 -0.1073370 10.9589376 3.7000734 6.3256724 8.6942607 10.2071838 8.9294368 10.6712838 2.2146533 8.2581613 NA 7.2037806 13.1583582 7.1099445 10.3564426 -0.1073370 8.4052568 7.8836685 -0.1073370 2.9631042 NA 6.1964949 5.3468895 1.8187279 11.4843297 5.5191519 10.7175136 11.1510443 10.1845752 5.2642737 10.3233755 12.9347152 8.8808306 4.9631042 4.0626398 10.1564525 2.2712165 1.1557492 NA 3.7606148 11.233994 7.492626 8.860228 16.827151 10.047051 12.133267 12.101984 10.338350 9.750695 10.637043 13.184201 11.440765 9.183654 8.674074 2.963104 8.345573 13.249688 10.8715673 11.8382309 6.7556607 14.2656597 9.4724069 5.6635439 8.3488627 9.3643890 9.3804052 6.0904216 6.3088778 9.8679886 5.6151809 5.7256048 10.6432534 8.9150816 8.7919199 13.4557194 10.2657965 10.9567829 9.3586883 7.9544901 10.3281757 6.5931535 10.5935870 10.1987755 9.8910222 9.8688483 11.2752298 10.5169611 9.9466398 10.7678488 9.6845279 2.6582572 9.5204301 9.8014127 12.2560821 7.5147653 10.7843457 7.4671180 10.2812264 11.0210949 7.5494959 13.8450911 10.4417284 10.0495554 12.3329082 10.5482446 2.5707786 -0.8442508 10.7703048 10.5905502 9.1292065 TCGA-E2-A1B1 45 0 NA 2653 breast stage iib t2 n1 m0 female 2007 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino 2 2 3 3 4 3 3 4 4 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 1.387189e-07 9.09090909090909 36.3636363636364 0 45.4545454545455 9.09090909090909 11.01957405 10.79173546 11.79797366 9.85457685 9.66637581 9.36678686 10.23063930 10.72853900 9.18259224 14.50186598 11.04465750 11.09202345 2.65850856 14.62820586 3.65850856 9.28737833 6.56539763 9.12774238 8.85621572 12.53354013 2.21104335 12.89456163 4.98043666 8.75232110 10.63292215 6.56860068 -1.24845059 12.13660841 9.40804181 2.07354606 7.62506076 8.28883517 0.33662617 4.10916830 10.47698319 11.02103590 9.92591844 11.50931946 10.43439210 11.95190257 10.12339358 10.52743302 14.36039157 8.35302549 9.00132290 11.69961908 12.01260998 5.00900670 0.07354606 9.91620970 12.16200206 0.55895330 11.63931357 8.20899807 7.77120751 5.36632571 10.59651889 11.97990959 10.01253655 12.62650229 13.29941525 6.69413080 11.44030438 11.13245815 11.88459861 11.69980168 5.34407571 12.05261295 11.27774937 4.64643343 9.92747828 9.42669184 3.50676695 6.60648516 10.37915090 10.74118887 9.74384715 10.31528997 2.14394845 10.46478863 13.77335607 13.03119128 9.57378937 9.12448194 -0.0011087 0.0026357 0.0000000 0.0000000 -0.0020530 0.0000000 -0.0317680 -0.0317680 0.0210430 0.0210430 0.0210430 0.0189430 0.0189430 -0.0015120 -0.0015120 0.0134920 -0.0031859 -0.0031859 0.0800220 -0.0040162 0.0066653 -0.1741100 2.0119000 1.1462000 0.8984900 -0.0227440 -0.0227440 0.0575110 -0.0011087 -0.0011087 -0.0061683 0.0000000 -0.0020530 0.0037465 0.0000000 0.0000000 -0.0317680 -0.0317680 -0.0317680 -0.0019399 -0.0032149 0.0210430 -0.0052610 -0.0052610 -0.0052610 -0.0052610 0.0189430 0.0189430 -0.0015120 -0.0015120 0.0134920 0.0134920 -0.0031859 -0.0031859 -0.0136050 0.0463540 -0.0040162 -0.0040162 0.0066653 0.0107030 -0.1741100 -0.2355700 0.0174090 -0.2031100 -0.0227440 0.0575110 -0.0094046 -0.2625200 -0.2625200 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.377 0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.263 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.377 0.511 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.263 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.0701596 NA 4.4795345 9.9380408 12.5991637 6.8129346 10.0870073 9.8318715 7.6594694 4.2273483 12.9489105 10.7359180 3.6585086 2.3365690 4.3214736 8.7459704 4.2594081 11.3777823 11.6846621 10.6976094 9.0072356 1.8390727 8.5805469 10.1000685 7.8123127 7.8601416 6.0277424 NA 11.3226585 7.5860877 7.6018035 7.6158032 6.8988214 8.6285713 10.3603339 5.8177051 7.2712529 -1.2484506 8.7410115 12.3623535 7.7987407 6.7029013 -2.2481079 3.3663222 7.8873260 4.8601434 3.8809010 0.3366262 7.6585078 4.4804913 3.9215411 9.8854014 1.3365690 9.7406566 10.5864830 10.1415171 5.6219815 10.2494688 14.5401187 9.9992479 4.6941336 4.7288946 10.5533254 0.7516351 NA -0.6633738 0.5589533 13.0709769 6.6250615 8.8337661 14.6282059 11.3291638 10.1880683 12.5335401 11.2706388 8.9834383 11.3601917 13.5623392 11.1235297 9.9162097 8.5670004 -0.2484506 9.2354327 11.0997919 11.057679 11.537784 5.366326 13.743071 9.178406 7.889889 8.230387 8.471006 10.232745 6.990022 6.992408 11.044657 5.402668 4.126659 11.141517 5.143936 7.268479 12.635501 10.618896 11.124210 8.711619 8.455520 11.660572 7.576576 11.567748 9.925918 10.676801 9.019574 11.284095 9.674944 11.256312 10.585298 9.837421 NA 9.292317 8.248241 12.162002 7.001916 11.639314 8.653992 10.616770 10.596519 7.137479 13.984394 10.560380 10.640931 13.335963 9.587273 5.235432 -1.144010 11.008710 10.623522 9.730327 TCGA-E2-A1B4 74 1 1004 NA breast stage iiia t1c n2a m0 female 2008 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino 1 1 3 1 2 2 4 1 5 4 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 1.040392e-07 17.2413793103448 27.5862068965517 6.89655172413793 20.6896551724138 27.5862068965517 10.45913034 8.63227294 10.93348412 7.31657841 9.06284513 9.03839201 10.13482968 9.17001517 9.96778521 12.97949654 10.88972974 10.20952550 0.08052123 13.41270604 2.16803223 9.87863125 7.33559312 8.77666266 9.78576500 13.46737013 3.08057240 14.62175196 6.49841683 10.56282797 10.45097954 4.55630065 -1.91920592 7.47930818 8.64566672 0.40250390 8.97538228 5.73161501 NA 2.32849183 8.72080960 9.53743236 10.82245285 11.26559483 9.49419257 10.68395913 10.17596153 11.29382073 14.10518484 6.57462077 10.02381200 11.25174134 10.62528757 4.14665522 6.83210898 8.11398746 11.68187110 -1.91920592 10.82623886 8.40136509 4.42041503 2.88791514 9.76487491 12.06987036 10.54306682 11.85802538 12.77056254 8.57542012 10.65775736 10.30787964 10.80763410 10.86233407 3.29001147 10.98651561 11.35727059 NA 10.38463062 8.30094279 3.69821848 1.98746640 10.73989155 9.89354408 9.98670360 8.77753215 2.08055534 9.90989083 12.07792051 12.52292495 9.62069252 10.14058491 4.9728e-03 -3.7605e-03 -6.9500e-04 -7.8863e-03 -1.0646e-02 8.2686e-01 2.2193e-03 -8.7986e-03 -3.7395e-03 -3.7395e-03 -3.7395e-03 -2.0269e-03 6.3871e-03 3.6070e-06 3.6070e-06 3.6070e-06 8.7528e-03 1.0280e-03 -8.8526e-03 1.2670e-03 1.0842e-02 1.8103e-02 1.8103e-02 1.8103e-02 2.3286e-02 2.3286e-02 1.6146e-02 1.4470e-02 5.4139e-03 5.4139e-03 -4.4312e-03 -6.9500e-04 -1.0646e-02 -1.0646e-02 -4.8461e-03 -4.8461e-03 2.2193e-03 -8.7986e-03 -8.7986e-03 0.0000e+00 0.0000e+00 -3.7395e-03 -7.8863e-03 7.6392e-03 7.6392e-03 7.6392e-03 6.3871e-03 6.3871e-03 3.6070e-06 3.6070e-06 8.6135e-03 8.6135e-03 8.7528e-03 1.0280e-03 1.0280e-03 -8.8526e-03 1.2670e-03 9.4491e-03 1.0842e-02 -7.9267e-01 1.8103e-02 1.8103e-02 1.9418e-03 2.3286e-02 1.8479e-02 1.4470e-02 6.2481e-03 2.7076e-02 2.7076e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.704 0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.781 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.704 0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.4053076 1.0805894 5.8421165 11.1766208 11.3876230 8.0373037 11.2196362 6.0333635 10.0090015 -0.9194788 12.2772435 10.5761448 1.6655292 -1.9192059 2.3284918 8.6823352 2.7244102 10.1851634 11.4633237 10.0596324 9.5286809 3.8354492 8.4126012 10.6811744 5.0917929 4.6197241 0.4025039 -1.9192059 10.5786658 5.7879234 6.8846956 7.9723480 7.5461312 11.2859836 10.1965836 2.1680322 8.2098476 NA 7.7688149 12.6187535 9.3676998 7.9859518 NA 4.9874573 8.3189693 NA 5.4024937 NA 2.8354593 6.4432536 2.2504766 10.2111351 NA 7.0833793 10.5266140 9.5719166 4.0112988 10.6601163 10.7003260 6.3659672 1.5399777 2.7244102 12.7096365 3.5399901 NA -1.9192059 1.4025039 12.8406446 2.9874482 9.1297325 13.4127060 10.6289049 10.7414518 13.4673701 12.4236114 8.9959661 9.7714357 12.5774807 9.5749202 8.1139875 8.9524699 0.6654837 7.9904574 10.8871142 10.620208 12.165041 6.774052 14.142314 8.754757 4.080564 9.179255 6.544090 10.257872 5.619724 6.544090 10.889730 7.212421 3.572417 10.549952 7.189089 4.369292 9.297917 10.119826 10.455604 6.523509 9.324928 9.310585 3.604131 11.568894 10.822453 10.634194 10.480910 11.222193 8.658937 8.864381 10.434538 7.590339 NA 9.693691 6.881464 11.681871 3.438120 10.826239 5.957081 11.204686 9.764875 6.468582 14.308970 10.473687 11.116910 12.631972 10.966070 NA -1.919206 9.725322 9.621177 9.711742 TCGA-E2-A1B5 46 0 NA 984 breast stage iia t2 n0 m0 female 2008 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino 3 3 3 3 4 3 6 4 1 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 1.040392e-07 40 40 0 20 0 10.6886421 9.4910319 11.2351674 8.0662636 8.8242110 9.6466244 8.6740181 10.2463630 9.5765807 10.0873587 11.1695850 10.6280685 NA 10.6385356 3.6296247 10.0118380 4.6542866 8.5315312 9.6218299 12.1300195 NA 12.0473311 3.7716426 9.9713153 9.6139935 5.8801663 NA 12.5498229 11.4157247 -0.2283679 7.8617557 6.9060692 NA 4.4720848 9.2544509 10.0040640 9.2654985 10.5381720 9.4493627 10.5977943 -0.2283679 10.0442728 14.1001427 7.9045028 9.0396001 10.4910318 10.1889682 4.8591049 NA 8.4100790 11.2915250 NA 11.1382385 7.2952051 8.4563918 4.6542866 10.1952842 12.1116322 10.3537850 11.5848230 12.5796016 6.2794379 10.8163787 10.3589518 10.9817056 10.5464301 3.5789991 11.6039397 8.4944504 -1.2283679 10.4360903 8.8457845 3.4720848 7.1510216 10.9198018 10.1319414 10.2709907 10.2669985 2.4720718 7.4298544 12.7643159 12.6457599 9.2443339 9.6132075 0.03115500 0.19984000 -0.03408600 -0.03408600 -0.00193990 0.47255000 -0.00360110 -0.00360110 -0.16039000 -0.16039000 0.16355000 0.00000000 0.00000000 -0.00664320 -0.00664320 -0.00664320 -0.02821800 0.45428000 -0.01326400 -0.00345750 0.00166420 -0.12304000 -0.12304000 1.08510000 0.00263570 0.00263570 0.00263570 0.02651400 0.03115500 0.03115500 -0.00027724 -0.03408600 -0.00193990 0.08608800 0.30409000 0.30409000 -0.00360110 -0.00360110 -0.00360110 0.10687000 -0.00526100 -0.17820000 0.09405600 0.09405600 0.09405600 0.09405600 0.00000000 0.00000000 -0.00664320 -0.00664320 -0.00664320 -0.17208000 -0.02821800 -0.17132000 0.24062000 -0.01326400 0.00624810 0.00624810 0.00166420 -0.17348000 -0.12304000 -0.12304000 0.00041593 0.00263570 0.00263570 0.02651400 0.02904400 -0.10802000 -0.10802000 0.000 0.000 0.000 0.000 -0.170 -0.170 0.000 0.000 0.000 0.177 0.177 0.468 0.591 0.000 0.000 0.000 0.000 0.000 0.165 0.000 0.000 0.000 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.473 0.304 0.000 0.000 0.107 0.000 -0.160 0.003 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.170 0.000 0.000 0.000 0.177 0.177 0.468 0.591 0.000 0.000 0.000 0.000 0.000 0.165 0.000 0.000 0.000 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.473 0.304 0.000 0.000 0.107 0.000 -0.160 0.003 0.000 0.000 0.000 0.000 8.9073522 3.1639656 5.6905065 10.2584781 13.3436919 7.3149847 10.1879128 9.0659191 9.2907191 3.0195774 11.8655557 11.5017183 3.1639656 5.3108018 1.0935602 7.7603274 4.3566087 11.5572998 11.6487354 10.4987126 9.0558887 1.3565946 8.8133021 10.0731393 9.8370593 9.5781926 2.3565946 NA 11.4323075 7.5854245 7.4581433 7.0935707 6.3030245 9.6366029 10.4352011 3.4720848 6.9614671 NA 7.9340346 12.6839711 7.5660586 8.2041847 NA 2.9415759 8.7431867 -0.2283679 4.6045340 -0.2283679 9.1873847 3.5789991 6.5331942 10.7677634 -1.2283679 9.3010736 10.7388693 9.5439577 7.6785339 11.5476648 13.1617448 10.1070334 5.5530041 6.5981910 11.6272902 -0.2283679 NA -1.2283679 1.5789870 11.595205 5.794010 9.508890 10.638536 10.987479 10.930568 12.130020 11.981858 9.261491 10.683784 13.568392 10.163960 8.410079 9.337697 -1.228368 9.384512 11.119541 10.606509 11.851794 5.093573 13.312797 9.284383 10.096948 8.886687 6.629625 10.061599 8.966400 8.601366 11.169585 6.519836 NA 10.258478 4.654287 6.314521 10.288820 11.489534 10.994438 7.746057 9.683784 10.378973 9.131393 10.912300 9.265499 11.217692 9.822852 9.913112 9.588627 10.135778 10.554232 7.620266 NA 9.498083 8.918313 11.291525 9.465130 11.138238 5.295205 11.330559 10.195284 6.971316 14.939100 10.839413 10.925512 11.925828 10.258981 8.241285 3.163966 9.914388 9.488463 9.461641 TCGA-E2-A1B6 44 0 NA 867 breast stage iia t2 n0 m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino 2 2 3 3 5 1 5 5 2 7 4 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 2.774378e-07 3.467973e-08 44.4444444444444 22.2222222222222 0 22.2222222222222 11.1111111111111 10.503412 8.562927 10.816533 6.236738 9.682523 9.634734 8.252655 10.291955 10.627224 11.125300 11.515118 10.459510 2.157788 11.525528 2.420833 9.462935 7.357458 9.054421 8.313615 5.885706 NA 10.104984 6.472481 10.414702 10.137068 6.993204 2.835863 12.908283 11.037369 1.835843 8.986239 6.931254 NA 4.778372 8.628647 9.432979 9.102644 10.035530 8.933231 10.321938 4.754722 7.382752 13.990972 6.481983 10.127891 10.706029 9.969642 4.083784 -1.164238 8.695392 11.288227 NA 9.980516 5.795860 8.079031 4.420819 9.599070 11.915759 9.971246 11.640795 12.944096 6.983062 10.126164 9.831639 10.384679 10.327961 1.536302 11.958038 8.532825 6.931254 10.210354 9.636353 3.693844 6.307532 10.785866 10.438788 10.727451 9.961594 8.582372 7.260024 12.496689 12.184516 9.520606 9.916009 -0.0351720 0.0623060 0.0305330 0.0305330 0.0114820 -0.1033800 0.0186050 0.0000000 0.1522700 0.1522700 0.1522700 -0.0164860 -0.0164860 0.0473510 0.0473510 0.0473510 -0.0326430 -0.0326430 0.0060516 -0.0972860 0.0258940 -0.0298650 -0.0298650 0.0523240 0.0176260 0.0176260 0.0176260 0.0287040 -0.0111170 -0.0351720 -0.0431150 0.0305330 0.0047927 -0.1075700 -0.1033800 -0.0992630 0.0186050 0.0000000 0.0000000 0.0184650 0.0184650 0.1522700 -0.0108410 -0.0108410 -0.0108410 -0.0108410 -0.0164860 -0.0164860 0.0473510 0.0473510 0.0473510 0.0473510 -0.0326430 -0.0326430 -0.0326430 0.0060516 -0.0972860 -0.0972860 -0.1006300 0.0319410 -0.1068500 -0.0298650 -0.0421660 0.0176260 0.0176260 0.0084239 0.0229470 0.0260340 0.0260340 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.103 -0.103 0.000 0.000 0.000 0.000 0.152 0.152 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.103 -0.103 0.000 0.000 0.000 0.000 0.152 0.152 0.000 0.000 0.000 0.000 9.2065448 0.4208327 6.8582247 10.6709209 12.1034488 6.6651995 10.4175287 8.5686185 10.0038212 -0.1640759 12.7027016 11.2774373 6.5773246 NA 3.1212641 8.5731048 5.2621212 11.8788846 11.3763487 10.0293828 9.9670713 0.1578198 9.1137260 10.7215537 9.9547984 5.3436530 0.1578198 3.2952822 10.8057834 4.1396414 6.8159968 8.8952017 6.2788007 10.9184821 10.2893852 2.8358635 9.4533248 1.2953116 7.5188522 12.2176706 8.4273799 8.4255084 0.4208327 0.4208327 8.5932473 5.6367580 3.1212641 1.9233013 9.2114398 4.2452446 6.9391455 11.0087536 2.2281722 7.5990700 10.5122552 10.4649863 7.6318973 11.9446268 13.7649077 8.1038144 5.9651401 6.1845858 10.3723474 1.1577552 7.9919407 -1.1642376 6.6007291 13.088969 8.350572 9.253183 11.525528 11.155953 11.699753 5.885706 10.270746 9.394924 10.687997 13.073105 10.241797 8.695392 9.209810 2.083792 8.504742 9.887746 9.639988 11.441105 3.742750 13.205997 8.248427 10.325454 9.064075 8.052603 9.039126 9.753602 8.612291 11.515118 7.424572 8.762153 9.849180 6.580691 9.058731 10.203818 11.509608 10.179043 7.940456 10.119814 4.450565 9.605282 11.943159 9.102644 10.846385 10.342165 9.905978 8.872031 10.251863 10.131052 7.415173 NA 10.460915 7.916968 11.288227 10.654639 9.980516 3.790053 10.903796 9.599070 7.918592 14.221197 10.813495 11.602697 11.725076 11.011719 9.848831 3.880255 9.972528 8.578167 8.956743 TCGA-E2-A1BC 63 0 NA 501 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 NA NA 1 2 3 1 4 3 6 4 4 4 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 5 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 6 0 0 0 0 0 0 0 5 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.427581e-07 18.5185185185185 18.5185185185185 3.7037037037037 40.7407407407407 18.5185185185185 11.1896516 10.4773702 11.7954288 9.6756399 8.1004679 9.5844005 10.8542708 9.4901942 9.6501549 13.2561514 10.9054313 10.6014916 2.9919345 13.1322620 4.0623290 9.5723904 4.8794705 8.6242117 10.5526584 13.1300872 -0.3300662 12.9872866 4.5279961 8.7915487 10.9078229 10.0120900 NA 7.4047252 10.7239413 0.6700245 8.1974924 8.0666199 -0.3300662 3.9919435 10.3512538 11.2231646 9.1778099 12.4670689 8.7941367 11.5503642 -0.3300662 10.4829949 14.6731379 8.4284720 9.9167559 11.2703929 10.8330360 4.2549795 2.8399394 9.4282385 11.7411425 NA 11.8988341 8.3565158 4.5769030 4.6242120 10.6472953 11.5911124 10.0120900 12.5830917 13.3406716 7.0962798 11.0978519 10.8653691 11.6961930 11.3349070 5.7144104 12.8350794 10.1046436 NA 10.3219639 9.0708948 3.4835449 4.6242120 10.1191639 10.3902596 9.7561516 10.5526584 2.8399394 8.5403799 13.2378526 13.3721880 10.1304712 8.9783544 0.0016196 0.0016196 0.0102850 0.0098241 -0.0796090 -0.5759500 0.0126550 -0.5121800 -0.5333800 -0.5333800 0.0040243 -0.0567120 -0.0567120 0.5079400 0.0012481 0.0012481 0.0023581 0.0023581 0.0088920 0.0043021 -0.0053992 -0.5418900 -0.0169790 -0.0169790 -0.0216470 -0.0216470 -0.0216470 -0.0120240 -0.0064491 0.0016196 -0.0067009 0.0098241 -0.0930060 -0.0796090 0.0125160 0.0125160 0.0126550 -0.5121800 -0.5381900 0.0031910 -0.5251200 -0.5556700 -0.0065050 -0.0065050 -0.0065050 -0.0065050 -0.0567120 -0.0611520 0.5079400 -0.5463300 0.0012481 0.0012481 0.0023581 0.0023581 0.0023581 0.0088920 0.0043021 0.0043021 -0.0053992 -0.5798800 -0.5418900 -0.0169790 0.0372170 -0.0216470 -0.0216470 -0.0120240 -0.0058140 -0.0118870 -0.0118870 0.000 0.000 0.507 0.000 0.000 0.000 0.000 0.000 0.000 0.515 -0.023 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.512 0.000 -0.520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.507 0.000 0.000 0.000 0.000 0.000 0.000 0.515 -0.023 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.512 0.000 -0.520 0.000 0.000 0.000 0.000 0.000 0.000 8.5279965 0.6700245 6.1457488 10.1004679 11.6822907 7.0555330 11.6815921 9.5802082 8.1284218 0.6700245 12.3715384 10.4448024 3.2549719 4.7144104 3.9919435 8.1088072 1.9919345 10.1077674 12.0159749 10.6763415 9.3120670 1.9919345 8.2920671 9.6784440 6.4114822 8.7144094 -0.3300662 NA 11.7109899 8.0363374 7.1294469 8.0580329 6.0962808 9.6493404 10.2568551 3.8399394 6.9084202 -0.3300662 8.8399404 12.8433802 8.8696876 7.0878680 NA 4.0623290 8.1857154 1.2549568 4.3138698 NA 3.7574820 5.7802103 2.4773665 9.7280070 NA 9.0076373 10.2159451 9.7534947 4.9179425 9.8133985 12.0322332 6.7574780 1.2549568 3.4773665 10.7999423 1.6700245 NA -0.3300662 2.2549870 12.564649 4.062329 9.005406 13.132262 10.782455 10.580658 13.130087 12.601861 9.211112 11.117099 13.368069 9.858604 9.428239 9.322860 NA 8.031959 11.359577 11.0650138 11.8317771 7.9274035 14.0533801 9.3102604 4.6700132 8.9986903 7.3494953 10.7209388 5.7144104 8.2624726 10.9054313 5.7361042 4.9179425 11.4131668 2.8399394 4.3715658 10.8903936 10.3503749 11.0087517 8.9737961 8.5495987 12.3255461 5.3424410 11.4726367 9.1778099 10.4140082 8.6812426 10.8548907 9.4709153 10.5044864 10.3521322 9.6909953 -0.3300662 9.2369637 7.4513752 11.7411425 5.2847251 11.8988341 7.3842605 10.1708572 10.6472953 7.6756402 13.7885509 10.1817680 10.8330360 12.7601278 9.8424429 NA NA 10.9461398 11.0115341 9.7495001 TCGA-E2-A1BD 53 0 NA 1133 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino 1 1 2 2 2 2 4 4 6 5 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.733986e-07 36 16 0 28 20 9.7788328 9.2158120 11.6973305 7.7115809 8.7609521 9.3000031 10.3383635 9.3768228 9.6185868 13.2417916 8.9519226 10.5152196 4.3844505 12.5672308 2.1793200 9.4414281 7.6765199 8.1755710 11.1076048 13.0534179 2.5329652 13.7796332 5.7709585 10.7331523 11.1924231 5.8797719 -0.4056425 12.5708154 8.7792459 0.5943575 8.5427378 7.0094076 NA 5.2382251 9.1159712 9.8689429 9.7292248 11.4407751 9.7146086 11.0541438 8.4881776 12.5734981 14.2993730 8.7517091 9.9541202 11.2607426 10.6615809 6.4187988 6.3131896 8.3941917 11.6283671 NA 10.5709348 4.9401433 4.0094099 3.5329652 10.6337467 11.9796938 11.3923023 12.0452382 12.5327863 8.8263918 10.6722990 10.1626783 11.2046265 10.9189262 3.7098530 12.2367984 11.5343171 -1.9907962 10.6880083 8.6613566 4.5146651 4.0538064 11.3242746 10.6453529 10.0858897 9.8327753 1.9162855 9.5505048 13.5474455 13.1786677 10.6948140 10.2206881 1.609000 1.608300 0.082925 0.066945 -0.206730 0.361660 -0.297090 -0.304270 0.356860 0.356860 0.379570 -0.010508 -0.010508 -0.296740 -0.296740 -0.296740 -0.103420 -0.103420 0.325430 -0.669190 -0.374590 0.027076 0.027076 0.027076 0.079880 0.079880 0.079880 0.223140 -0.017891 -0.035721 -0.140780 0.066945 -0.191490 -0.213540 0.361660 0.361660 -0.297090 -0.304270 -0.304270 0.330440 0.330440 0.356860 0.334320 0.334320 0.334320 0.330600 -0.010508 -0.010508 -0.296740 -0.296740 -0.296740 -0.296740 -0.103420 -0.103420 -0.103420 0.325430 0.035242 -0.679030 -0.374590 -0.706370 0.027076 0.027076 -0.218000 0.079880 0.079880 0.205800 0.010006 -0.665310 -0.691180 0.000 0.000 -0.297 -0.297 -0.103 -0.103 0.325 0.000 -0.375 0.486 -0.682 0.000 0.000 -0.218 -0.218 0.000 0.000 0.000 1.602 0.206 0.206 0.000 -0.665 -0.141 -0.141 0.000 0.000 -0.207 -0.207 0.362 0.362 -0.304 -0.304 0.330 0.330 0.357 0.357 0.286 0.286 0.000 0.000 0.000 0.000 -0.297 -0.297 -0.103 -0.103 0.325 0.000 -0.375 0.486 -0.682 0.000 0.000 -0.218 -0.218 0.000 0.000 0.000 1.602 0.206 0.206 0.000 -0.665 -0.141 -0.141 0.000 0.000 -0.207 -0.207 0.362 0.362 -0.304 -0.304 0.330 0.330 0.357 0.357 0.286 0.286 0.000 0.000 8.1755710 3.7642931 5.4356719 11.1826168 11.6366000 8.3154240 12.2586698 8.3591095 9.3684822 NA 11.0321227 11.1280735 3.6532664 2.2573426 1.3313613 8.3658600 3.6532664 10.5124884 11.2023174 11.3077572 10.0775146 5.6241184 8.4595882 10.6079259 5.8486129 3.9636036 -0.9905095 NA 10.7561324 7.7287967 6.3086157 7.4481997 9.9870458 11.7295915 11.0132774 2.4688439 9.1855814 -1.9907962 7.4166759 11.9389440 7.8247914 8.8943418 NA 6.3581360 8.9916888 NA 4.6959103 0.3313613 3.6818315 5.3322389 1.9162855 10.4716548 -1.9907962 8.6074605 10.3109044 9.7609523 6.0862233 9.8493992 11.6849242 6.9072536 3.6818315 2.8673825 11.9136664 2.9636036 -0.9905095 1.1793200 0.3313613 11.430973 4.532971 8.195522 12.567231 10.878809 11.252731 13.053418 12.162089 8.984195 10.096871 13.060107 9.755083 8.394192 8.973027 3.366966 7.519183 11.149918 11.271062 11.925287 7.672966 13.797205 8.911029 5.179332 9.067400 8.417738 10.772789 5.823189 7.161693 8.951923 6.946047 3.053806 10.216117 8.568785 7.238107 10.323708 10.484635 10.116298 8.692815 8.923045 10.489441 3.331333 11.767731 9.729225 11.034548 10.489693 10.728155 9.858422 9.692403 11.215812 8.003761 -1.990796 9.010542 6.130941 11.628367 3.764293 10.570935 6.940146 11.092222 10.633747 7.245614 14.196857 10.162010 10.277658 12.570039 11.058065 -1.990796 NA 10.086224 8.839923 10.194903 TCGA-E2-A1IE 61 0 NA 2362 breast stage iib t2 n1 m0 female 2008 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 1 1 NA NA 1 4 5 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 6.935946e-08 35.2941176470588 5.88235294117647 0 41.1764705882353 17.6470588235294 9.4651997 10.0701941 12.0802727 9.4651997 8.8776924 9.2746598 10.7646805 9.1409813 10.0003229 13.8918310 10.9113019 10.4457450 0.3169567 13.2234922 3.1649793 7.7195634 4.9019385 8.3481961 9.0027773 13.6625212 3.4544786 14.2473820 5.5107499 9.1243323 11.6218990 9.5346927 NA 7.5186115 9.5058133 2.0824982 8.1687263 6.6568267 NA 4.4213108 10.0742006 10.1463830 9.8738666 10.4299380 9.4379927 10.5807160 -0.4200475 11.0983370 14.3681863 8.6189856 11.3965928 10.7371481 10.9530581 3.9019385 5.7894658 9.6325798 10.1904214 -0.4200475 10.3412860 9.0577700 3.8776952 3.9257906 9.7755890 11.8744410 10.0010246 11.9149368 12.9222253 7.9049422 11.3162727 10.6854336 11.3881715 11.0210539 5.5800128 12.3735473 11.7377797 -2.0052031 10.1482846 8.9154020 3.6391974 3.3169711 10.3567189 10.6402573 10.8822699 9.9762597 1.6955039 9.0476172 11.1867254 10.0380766 10.2316615 8.9041923 -0.00747200 0.00152550 0.00555290 0.63390000 -0.00221680 -0.00429290 0.00235810 3.65690000 3.65690000 3.09610000 0.00027728 0.00597000 -0.68857000 0.00666530 0.66106000 0.66106000 0.00000000 0.00000000 0.02609200 0.00513590 0.03411300 -0.70523000 -0.01409000 0.62995000 -0.02438800 -0.02438800 -0.02438800 0.20060000 -0.06196700 -0.00747200 0.00124810 -0.69342000 -0.00221680 -0.00221680 -0.00429290 -0.00429290 0.01460900 -0.68661000 -0.68067000 0.61952000 -0.64874000 -0.69758000 0.00499690 0.00499690 0.00499690 0.00499690 -0.68857000 -0.69052000 -0.71640000 -0.01656700 -0.69500000 -0.69378000 0.00000000 0.00000000 0.00000000 -0.69378000 -0.69992000 -0.69992000 0.02426800 -0.69369000 -0.70523000 0.62995000 0.01349200 -0.07467800 -0.02438800 0.00681850 0.00694350 0.00291330 0.38965000 0.000 -0.680 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.691 0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.634 0.000 0.000 0.000 0.000 -0.681 -0.681 0.000 0.000 -0.698 0.000 0.000 0.000 -0.108 -0.108 0.000 -0.680 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.691 0.630 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.634 0.000 0.000 0.000 0.000 -0.681 -0.681 0.000 0.000 -0.698 0.000 0.000 0.000 -0.108 -0.108 8.8951614 3.2045007 5.5875060 9.2931118 11.8893933 7.7186760 11.0101158 8.4902548 9.6106835 1.1649793 11.5976321 10.7816374 7.6621606 5.8342536 4.4869010 7.5087764 2.5186107 8.8208031 11.4837681 10.4173769 9.4353994 2.9492548 8.3192300 9.5715337 5.8088304 6.6389050 -2.0052031 NA 10.6223552 6.1749576 4.7499364 8.6550452 7.4379925 10.8527543 10.7679823 2.6389079 8.6745295 NA 7.3657363 12.8374487 9.6079178 7.8136311 -2.0052031 8.5715335 8.2942573 5.5649055 3.9019385 2.1649793 2.6954817 5.4757172 1.3169567 9.7516055 NA 7.6710060 10.3175408 9.9276331 6.0665112 9.0346537 11.5590796 5.9375633 1.6955039 2.1649793 11.5681047 8.6325798 NA 4.2804516 0.3169567 14.041885 6.712725 8.517631 13.223492 10.760543 10.234648 13.662521 13.839044 9.598903 10.766745 11.941499 10.709724 9.632580 8.807226 -1.004914 8.330440 11.609184 11.028472 11.420659 8.031223 13.916494 8.949245 3.638908 9.165600 9.587039 10.720215 3.901938 8.231063 10.911302 6.779684 NA 10.632353 8.434880 7.774522 9.756185 9.519101 10.297688 7.446755 8.721267 11.845236 2.853038 11.855867 9.873867 9.767776 10.193187 11.289383 8.835827 10.502844 10.778661 8.748266 0.802400 8.797574 5.621123 10.190421 2.901938 10.341286 5.989402 11.532268 9.775589 7.374600 13.687283 10.379293 9.612976 12.588207 10.207546 NA NA 10.649462 9.658163 10.050671 TCGA-E2-A1IF 74 0 NA 1138 breast stage i t1c n0 m0 female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 3 NA NA 4 3 5 3 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 3.467973e-08 8.33333333333333 8.33333333333333 8.33333333333333 25 50 9.834598 8.750318 10.976973 6.846626 8.945629 8.839956 9.889244 9.657020 10.669864 12.426477 8.909135 10.192313 1.934403 12.344146 1.086376 10.666852 5.753161 8.802024 9.355999 12.549623 0.764516 13.070681 5.671367 10.536288 9.735301 4.914225 -1.235484 8.938154 9.943141 3.223901 7.495796 5.944385 NA 4.049875 8.754581 10.231573 10.424918 10.787538 9.013590 10.002881 6.578258 10.381485 14.435990 6.876812 9.596576 10.549111 10.258832 5.012403 6.603680 7.609967 11.340961 -1.235484 10.900186 5.012403 4.718674 4.786842 9.868420 11.568809 10.617396 12.190217 12.375271 9.102099 10.645591 10.148840 10.563353 10.198062 2.571822 11.508890 12.203139 5.436901 10.607613 8.203269 3.719140 3.464917 11.329817 9.821792 9.777799 8.843962 3.519366 9.725926 12.712935 12.408784 9.644826 10.216718 0.96763000 0.96763000 -0.00012213 -0.00012213 0.00000000 -0.00136930 -0.00164640 -0.00867580 -0.34353000 -0.34353000 -0.00095368 0.01225300 0.00473550 0.00584750 0.00584750 0.00584750 0.00390190 0.00390190 0.00209700 -0.00053795 -0.33536000 0.01253200 0.01253200 0.01253200 0.00515240 0.00515240 0.00515240 0.01532400 0.01225300 0.01225300 -0.00192340 -0.00012213 0.00445760 -0.01028100 -0.00136930 -0.00136930 -0.00164640 -0.00867580 -0.00867580 -0.00496800 -0.00150790 -0.34353000 0.00376300 0.00376300 0.00376300 0.00376300 0.00473550 0.00473550 0.00584750 0.00584750 0.00584750 0.00584750 0.00390190 0.00390190 0.00390190 0.00209700 -0.00053795 -0.00053795 -0.33536000 -0.33397000 0.01253200 0.01253200 0.01420700 0.00515240 0.00515240 0.01532400 0.00362410 -0.33143000 -0.34268000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.335 0.656 -0.334 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.955 0.000 0.000 0.000 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.343 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.335 0.656 -0.334 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.955 0.000 0.000 0.000 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.343 0.000 0.000 0.000 0.000 0.000 8.505944 -1.235484 6.878219 11.384009 12.005715 7.623732 11.686504 7.401645 9.765983 1.764474 12.327911 11.786987 4.012408 2.571822 2.086410 8.353191 3.718668 10.783720 11.120378 11.064829 9.787538 4.993294 8.320983 10.580260 6.311371 7.898903 0.764516 NA 10.442196 5.139515 6.792383 7.404722 8.110991 10.783647 10.602893 2.086410 9.077360 NA 7.256329 12.329698 8.595784 9.604468 -1.235484 5.464917 8.205346 3.223901 5.122027 -1.235484 4.379184 4.223909 3.973933 10.854589 3.223901 8.305573 10.904987 9.770803 6.248292 10.302180 10.821792 7.797899 3.288034 3.973933 11.691884 2.851939 -1.235484 2.086410 3.012408 12.276600 6.012403 8.895047 12.344146 10.416425 11.557064 12.549623 11.151417 8.911682 10.017733 13.645017 9.720853 7.609967 9.234119 1.086376 7.364389 10.575048 11.198584 12.385613 5.532660 13.496694 8.825118 6.401101 8.921824 7.898903 9.887453 6.609966 7.090906 8.909135 6.770101 3.408331 10.249803 8.628663 6.312142 10.407882 10.165890 10.896976 7.901468 9.925609 7.584656 5.478723 11.896756 10.424918 10.717582 10.257331 10.406528 10.192837 9.845960 10.377345 7.447471 NA 9.262279 7.542554 11.340961 6.182329 10.900186 7.961693 11.171232 9.868420 7.021865 14.096758 10.455784 10.686689 12.362296 10.750674 1.349422 -1.235484 9.445715 9.493247 9.604468 TCGA-E2-A1IG 45 0 NA 2140 breast stage iib t2 n1mi m0 female 2009 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 1 2 2 2 1 1 5 1 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 2.774378e-07 25 12.5 3.125 25 34.375 10.3045998 9.7247229 11.8228965 9.0438792 9.4060793 8.9987915 10.0192555 10.2527326 10.0919008 14.0285037 11.5383933 11.0313401 2.7870563 13.0812615 2.6995738 9.3948116 7.2580044 8.6854255 12.2297458 12.6531433 NA 13.6068496 2.8695161 9.1453845 11.6334584 7.1047245 -1.3004484 8.1487318 9.6911052 1.5069573 6.5261314 8.4292042 0.6995516 3.9475072 9.5117608 9.8955707 8.4956228 10.5016958 9.8912595 10.8143017 12.0045050 11.2336430 15.2689050 8.2224786 10.3411835 10.9256945 11.9943477 5.5944022 7.4842179 8.9581493 10.8172265 -0.3004484 11.0101962 6.6595850 4.6064718 4.4000255 9.6310595 11.9284020 10.5061330 13.0031501 12.7778176 8.2788992 11.0659056 10.9109759 10.7278348 10.8410520 4.8894103 12.0195377 10.8320831 -0.3004484 10.4996744 8.7804010 3.3759569 4.6537823 10.3515319 10.2694390 10.9727962 9.4460976 4.5324728 8.6668095 12.4335520 11.1939390 10.0582346 9.8275777 0.71490000 0.71490000 0.00027728 0.00027728 0.00819590 0.00624810 1.42710000 -0.00277070 3.65690000 1.47810000 0.09579800 -0.01574100 -0.00871460 0.01307400 3.65690000 -0.75054000 -0.00719580 -0.00719580 0.01880300 0.04131700 -0.00512270 -0.78420000 1.28460000 1.37410000 -0.05778900 -0.05778900 -0.05878400 -0.01821600 -0.01409000 -0.01409000 -0.00456950 0.00027728 0.00724200 0.00819590 0.00624810 0.00624810 -0.19112000 -0.00277070 -0.00277070 -0.00263220 -0.00263220 0.79588000 0.00166420 -0.01043000 -0.01043000 -0.01043000 -0.00871460 -0.00871460 0.01307400 -0.04468600 -0.77782000 2.99230000 -0.00719580 -0.00719580 -0.00719580 -0.74336000 0.04131700 0.02665400 -0.01078400 -0.00249380 -0.78420000 1.28460000 0.00819590 -0.05778900 -0.05778900 -0.00484610 -0.00761010 -0.04115900 -0.04115900 0.000 0.000 -0.751 -0.751 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 1.285 0.000 0.000 0.000 0.000 0.000 0.715 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.763 0.000 0.000 0.000 0.000 0.000 0.000 -0.751 -0.751 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.667 1.285 0.000 0.000 0.000 0.000 0.000 0.715 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.763 -0.763 0.000 0.000 0.000 0.000 7.7357571 NA 5.2694372 10.6195640 11.5403613 7.3184090 10.6628408 9.3203897 9.1188061 NA 11.4230310 11.8283672 5.1425278 0.6995516 4.4275056 7.7108106 4.9284035 11.4268657 11.0587838 10.9253933 9.5513324 NA 8.2464779 10.4661123 5.5450726 5.2387410 5.7548661 NA 10.5618333 5.6303210 6.8745093 7.0746232 7.1874233 10.4750456 10.6210524 2.8695161 9.0360898 -0.3004484 8.2406802 12.4192930 8.5101549 8.0372054 -0.3004484 7.6273610 8.7080120 1.0214797 5.2231445 NA 2.7870563 5.9190421 1.0214797 10.2713360 0.6995516 9.5974287 10.6409978 9.7850558 5.4939995 8.4694212 12.4813529 7.0961880 1.6995960 4.3142905 13.1128807 5.0919029 NA 3.4000187 2.1590156 15.635817 5.630321 8.442735 13.081262 10.248887 10.189933 12.653143 13.223758 8.506938 10.695704 12.891799 10.651232 8.958149 10.598185 1.699596 8.199429 12.238863 11.1984326 11.7162176 6.6768640 12.9375350 8.4677677 5.1425278 9.4661124 9.2684896 10.3552572 6.4611340 9.5944011 11.5383933 6.6537795 2.7870563 10.3289400 6.7602795 7.8031599 11.7475593 10.2324263 11.0488646 8.9041544 9.4611346 11.0530059 2.6995738 10.8226281 8.4956228 10.9053766 10.1518246 11.4962314 9.7177835 10.5300985 10.7989312 8.9247908 NA 8.8753199 7.3859435 10.8172265 3.5069446 11.0101962 8.2290139 11.0800444 9.6310595 6.9427573 13.5772509 10.2939080 9.5316823 13.4289917 10.6967628 NA 0.2845141 10.1158531 10.0576850 9.8992557 TCGA-E2-A1IH 80 0 NA 1026 breast stage i t1c n0 m0 female 2008 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 5 NA NA 1 4 4 3 4 3 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.664627e-06 3.467973e-07 12.0689655172414 43.1034482758621 6.89655172413793 15.5172413793103 22.4137931034483 10.3259460 10.2056358 11.4855079 9.0761272 9.0935620 9.1538066 9.2741342 10.8153714 9.3830685 8.7276458 11.5484965 10.7727165 -0.6077925 12.5397784 4.3464535 9.7298773 6.2931221 8.9903079 7.2901009 12.8864235 1.8516791 13.6673615 3.7498024 9.7541389 10.8853603 6.4690703 -0.0228300 12.2772844 9.0813798 3.0361165 7.3347703 8.4380150 NA 5.5721651 9.8346806 10.6845771 9.7781179 11.9983136 10.0247963 11.3428113 11.6410725 11.2546991 14.0865317 7.0622394 8.8444968 10.7840361 11.4325451 5.0926937 5.6017084 9.1562978 11.0347585 NA 11.1907273 7.9921685 8.0361115 4.2502340 10.9961136 12.2068379 10.6234766 12.5231477 12.9577741 8.2885879 11.4388679 10.7700787 11.5934605 10.6845771 4.6541605 12.4019091 12.2926506 NA 10.1218761 8.8289669 3.2078304 6.4529512 10.5653079 10.5489706 9.8042959 9.6971771 3.0926980 10.0835628 13.4691545 12.3542477 10.0513595 9.5986594 0.5544300 0.5484100 0.1778400 0.1778400 -0.1849800 0.1746800 0.0134920 -0.0114030 2.6229000 -0.4991300 0.3399900 0.0083351 0.0158660 -0.1484400 -0.1353600 -0.1353600 0.1698600 0.1436800 -0.0030475 0.3757800 0.0000000 -0.4863800 0.2228300 0.2228300 0.4667300 0.0114000 -0.0019043 0.2406200 -0.4135500 -0.8377700 -0.1354900 0.1778400 -0.4974600 -0.1849800 0.1746800 0.1746800 0.0134920 -0.0114030 -0.0114030 0.3706800 0.3231800 -0.4280000 0.1608500 0.1608500 0.1608500 0.2222200 -0.5028700 0.4699800 -0.3322500 -0.1353600 -0.8360700 -0.8499500 0.1698600 -0.1689100 0.2015200 -0.0030475 -0.5070100 -0.4990200 0.0000000 -0.4872200 -0.4863800 0.2228300 -0.3489300 -0.5202000 -0.0019043 0.2406200 -0.1132500 -0.4799700 -0.4799700 0.000 0.000 -0.148 -0.836 0.170 0.170 0.000 -0.499 0.000 0.000 -0.470 -0.264 0.223 -0.345 -0.345 0.000 0.000 -0.493 0.038 0.241 0.241 -0.113 -0.480 -0.155 -0.155 0.178 0.178 -0.497 -0.497 0.175 0.175 0.000 0.000 0.323 0.323 -0.442 -0.102 0.161 0.000 0.000 0.000 0.000 0.000 -0.148 -0.836 0.170 0.170 0.000 -0.499 0.000 0.000 -0.470 -0.264 0.223 -0.345 -0.345 0.000 0.000 -0.493 0.038 0.241 0.241 -0.113 -0.480 -0.155 -0.155 0.178 0.178 -0.497 -0.497 0.175 0.175 0.000 0.000 0.323 0.323 -0.442 -0.102 0.161 0.000 0.000 0.000 8.7107982 -1.6077925 6.4637173 9.5565338 10.7691948 5.3633393 9.9903079 9.3269193 8.7435702 0.7142235 12.5525208 11.5831604 2.2991567 0.9772433 3.4797221 7.9940264 4.6210731 10.9865800 11.2312623 10.8203539 9.6204730 0.7142235 7.8557798 10.4863332 8.2672366 6.2687731 1.1996252 NA 10.9367369 5.6868759 7.3051452 7.8372703 6.1201757 10.0437646 10.2919900 3.7141796 7.9449246 -1.6077925 8.1454721 12.4277419 7.8639304 8.0822534 0.9772433 0.3922075 8.3809402 -1.6077925 4.7321064 NA 8.5671811 4.0675097 3.7498024 10.1463079 NA 8.7431945 10.4879821 10.2357840 6.5420026 10.4121936 12.8466190 9.4935747 5.2124332 5.3111180 11.1893090 3.0926980 NA -1.6077925 1.9772066 13.376496 6.601708 8.847583 12.539778 10.013850 10.745678 12.886424 10.970628 9.205491 10.600185 13.554096 10.322253 9.156298 9.477064 NA 7.919732 11.152560 10.783768 11.071736 6.780273 12.844239 8.856791 8.531807 8.443465 8.467735 10.056818 7.202827 7.299146 11.548497 7.425678 1.392262 10.593767 6.287073 7.104886 11.116556 10.893346 10.563119 9.422923 7.716436 10.365594 8.565933 12.788213 9.778118 10.819044 9.826884 11.468069 9.677658 10.305893 10.355874 7.845526 1.392262 8.602111 9.075882 11.034758 8.966849 11.190727 8.495543 10.525719 10.996114 6.452951 13.639033 10.249848 10.674185 12.869634 10.343904 2.915827 2.977225 9.694894 9.449570 9.587628 TCGA-E2-A1II 51 0 NA 1025 breast stage i t1c n0 m0 female 2008 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 3 NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 5.895554e-07 1.733986e-07 16.6666666666667 4.16666666666667 8.33333333333333 20.8333333333333 50 9.63593646 9.53916696 11.46287645 9.87497981 8.27471639 8.74339177 8.74514588 10.29760723 9.71055144 12.34507680 11.36531897 10.35156793 0.06046249 10.88057625 2.96727930 8.12917533 6.71144948 8.74689787 10.26006966 5.45271403 NA 7.77464278 6.02618258 9.38963306 10.83147399 3.70425227 -0.93953751 11.21426593 11.12007973 2.96727930 8.35271881 7.43108469 NA 5.78831768 10.04837175 10.84952333 7.43108469 9.98149436 10.07371997 10.17218496 NA 8.06882610 13.75589746 8.48090489 9.01168208 10.79848954 10.23219953 3.14786022 NA 8.96427906 9.83847438 NA 10.79891183 5.61498658 8.69702176 5.30832447 9.28921592 11.92902693 10.14918555 11.49032704 12.63924166 6.15842994 10.71279411 10.83806359 10.94837942 10.82485423 5.14786022 11.89289176 8.83847438 1.86773835 10.19866910 10.68153342 2.31286844 6.22026804 11.27198142 10.24836785 10.27167720 9.66495050 4.55224795 4.41794700 12.84124458 12.31099178 10.29820477 9.50334078 0.6079200 0.5581500 -0.2784600 0.1861600 -0.2882200 0.6636400 0.6857000 0.1397600 0.2212900 0.1736200 1.3919000 -0.0308130 -0.0308130 0.1795000 0.1795000 0.1795000 1.2116000 0.6377400 -0.2760700 -0.2773900 -0.2661200 -0.2448400 -0.2448400 -0.2448400 0.2022800 0.2022800 0.2022800 0.2128400 -0.2482500 0.1698600 -0.2821500 -0.2784600 -0.2882200 -0.3021600 -0.2708100 -0.2708100 0.6857000 0.1397600 0.0612220 0.2159100 -0.2882200 -0.3204200 0.6619800 0.6708500 -0.2642000 -0.2631200 -0.0308130 0.0746960 0.1795000 0.1795000 0.1795000 0.1795000 1.2116000 0.6377400 0.6579200 -0.2760700 -0.2773900 -0.2773900 -0.2661200 -0.2702100 -0.2448400 -0.2448400 -0.0071006 -0.2032400 0.2022800 0.2128400 -0.0310860 -0.2722400 -0.2566000 0.000 0.000 0.180 0.180 0.638 0.638 -0.276 -0.277 -0.266 -0.270 -0.270 -0.245 -0.245 0.000 0.000 0.202 0.202 0.563 0.563 0.213 0.213 0.000 -0.257 0.202 -0.282 -0.095 0.175 -0.288 -0.288 0.664 -0.077 0.140 0.140 0.205 0.205 -0.135 0.174 0.671 0.408 0.000 0.000 0.000 0.000 0.180 0.180 0.638 0.638 -0.276 -0.277 -0.266 -0.270 -0.270 -0.245 -0.245 0.000 0.000 0.202 0.202 0.563 0.563 0.213 0.213 0.000 -0.257 0.202 -0.282 -0.095 0.175 -0.288 -0.288 0.664 -0.077 0.140 0.140 0.205 0.205 -0.135 0.174 0.671 0.408 0.000 0.000 8.46766505 NA 1.86773835 10.93921453 11.32278579 6.74570659 10.15249375 8.82891238 8.59092083 NA 12.40732649 11.52185112 0.06046249 NA 1.86773835 9.49189497 4.34580085 11.21742837 11.73767645 10.92032025 9.64253931 4.86775318 9.55425270 10.58052484 8.26006942 -0.93953751 -0.93953751 1.06039331 10.67510713 5.45271403 6.97926055 9.11974186 3.51983122 9.58770815 10.46500667 4.86775318 10.02978373 3.06039331 8.39355263 12.31424476 7.33652173 6.10479162 NA 1.38233524 8.66772753 5.34580085 2.23032600 -0.93953751 8.21521555 2.23032600 4.51983122 11.55275122 NA 11.04979179 11.24403268 11.24805867 6.82194869 10.28801324 14.32937781 10.03552879 6.75388395 6.51982965 10.61018190 1.06039331 -0.93953751 -0.93953751 6.97328638 9.150510 8.199949 8.066022 10.880576 10.049082 11.886151 5.452714 9.780641 9.581016 11.867148 13.450969 13.174546 8.964279 7.560243 3.583964 7.404693 10.258228 10.360178 11.060397 6.158430 14.038883 8.752141 8.011682 9.888534 9.051919 10.076307 8.532073 5.583958 11.365319 11.065671 NA 10.470849 7.345799 9.154026 12.111096 11.195786 10.063915 8.348110 8.505412 9.518804 8.707856 10.195055 7.431085 10.327184 10.176741 11.581752 9.303571 11.227502 10.705155 9.164996 NA 9.737192 7.567042 9.838474 8.652854 10.798912 5.269852 10.607774 9.289216 8.116303 14.105858 10.426720 11.570914 12.302529 11.256999 4.308324 NA 10.520853 9.399134 8.790018 TCGA-E2-A1IJ 57 0 NA 865 breast stage i t1c n0 m0 female 2009 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 NA NA 3 3 4 3 3 3 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.040392e-07 21.4285714285714 14.2857142857143 14.2857142857143 28.5714285714286 21.4285714285714 10.2492131 9.5900497 11.5728152 9.0389508 8.7621106 9.1605126 10.0728980 9.9253806 10.4367102 9.7864469 10.8984495 10.4028902 5.8530849 13.4812259 2.3612350 10.6610115 4.9759419 8.8165584 8.5633549 12.4775750 0.9462068 12.8439130 5.3385100 9.4814431 10.1845983 6.1161194 NA 9.2993404 8.4460395 1.9462068 9.0265669 7.7449354 -0.6386808 5.1425891 9.7567651 10.3241271 9.4995029 11.0967871 9.8308729 11.0599357 12.0737581 10.4015208 14.8062136 8.5986082 10.2469275 10.6274319 11.2078968 5.6280182 5.6091580 8.6581472 11.9595162 -0.6386808 10.3918982 5.7706229 6.8041749 5.2681199 10.3470730 11.5972452 10.4592632 12.4876129 12.6340066 8.4513434 10.9964957 10.6281288 11.1001678 10.8052106 4.1685859 11.7605090 9.2362125 NA 10.5559879 8.8103798 2.1706301 5.6466321 10.4400490 9.9263331 10.2867855 9.5398959 4.3154286 9.9158199 13.2807462 12.5317821 9.9405471 9.9396037 0.51037000 0.51037000 0.00110930 0.00110930 0.00332990 -0.00152430 0.00000000 0.00000000 0.00416320 0.00416320 0.00416320 -0.00401620 -0.00401620 -0.00180140 -0.03750100 -0.03750100 -0.00263220 -0.00263220 0.01321300 0.00083195 -0.01131800 -0.33653000 0.31723000 0.31723000 -0.00401620 -0.00401620 -0.00401620 0.00444110 -0.00393710 -0.36147000 -0.00249380 0.00110930 0.00332990 0.00332990 -0.00152430 -0.00152430 0.00000000 0.00000000 0.00000000 0.52976000 0.00819590 0.00416320 -0.00377330 -0.00377330 -0.00377330 0.00097064 -0.46887000 -0.00138580 -0.00180140 -0.03750100 -0.03750100 -0.03750100 -0.00263220 -0.00263220 0.00097064 -0.00180140 0.00083195 0.00083195 -0.00110870 -0.23631000 -0.35843000 0.31723000 0.00360760 -0.00401620 -0.00401620 0.00208050 -0.00705760 -0.35396000 -0.41201000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.440 0.203 -0.358 0.317 0.000 0.000 0.000 0.000 0.000 0.510 0.000 0.000 0.000 -0.354 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.440 0.203 -0.358 0.317 0.000 0.000 0.000 0.000 0.000 0.510 0.000 0.000 0.000 -0.354 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1425906 0.3612069 5.5510545 10.7110652 11.6189135 7.2077240 11.3183331 9.8593024 8.9587995 0.9462068 12.3295378 11.5562710 3.1685939 0.3612069 3.6091640 8.1294154 4.7874952 11.0724678 11.3675572 10.7330077 9.1572706 5.2438747 7.7621103 10.1127751 7.2919682 4.9759419 -0.6386808 NA 11.1306557 7.3270154 8.2771102 7.4219268 8.4982221 10.0546571 10.3255719 4.8530824 8.8430304 NA 8.1814102 12.3013611 8.5633549 8.1425906 NA 2.1685779 8.0993231 NA 4.5311569 NA 6.7958591 5.1685859 5.0336565 10.2726230 0.9462068 9.3399415 10.5816094 9.5374042 6.0194417 10.0720374 12.3658027 8.4380466 3.2681199 4.7187835 11.7038614 2.6831574 NA 1.3612069 2.3612350 12.792526 5.194123 8.707745 13.481226 10.461236 10.456628 12.477575 12.061888 9.145359 10.658721 13.328637 10.126932 8.658147 10.871006 NA 7.669570 10.933458 11.2373643 11.9660159 5.0336565 13.9406601 9.0014760 7.4801722 8.7853972 8.1360181 10.1215933 7.6876605 7.5609037 10.8984495 8.2530149 5.2192111 10.6758143 6.7621109 6.1461277 11.8889524 10.8930998 10.6632987 7.9796167 9.1244434 11.0891515 6.9685608 12.3665784 9.4995029 10.5700750 9.8530842 10.8570861 10.4664848 10.7953380 10.4723667 8.7165822 NA 10.0393294 7.4270513 11.9595162 6.9081260 10.3918982 8.9234734 10.9475267 10.3470730 7.2620977 13.8218149 9.8789005 10.3385110 13.2602103 10.6870987 0.3612069 -0.6386808 10.6127134 10.1236130 9.7209806 TCGA-E2-A1IK 71 0 NA 1800 breast stage iia t1c n1mi m0 female 2009 NA no infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 3 3 NA NA 4 1 4 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 1.040392e-07 18.1818181818182 9.09090909090909 18.1818181818182 0 54.5454545454545 9.3577963 9.1936624 11.2944293 8.4281273 8.5007312 9.0708664 10.7597957 9.9625748 10.6726218 13.9054810 11.4554985 10.5254121 NA 10.6647435 2.4739427 10.3675361 6.7218593 8.1206697 10.2099948 13.8716058 0.1519887 14.1745443 6.5270422 10.1444883 10.2566018 8.6478581 0.1519887 9.2552909 11.3954746 NA 7.9561339 6.6196082 NA 4.1963946 9.2709442 9.9341822 9.7369655 9.6930997 9.6843591 10.4443247 7.2447606 11.8831099 13.9465205 7.1791905 10.7322617 11.3744961 10.6473585 1.4739427 NA 8.3951772 10.0834793 0.7369944 11.1761039 4.3999298 5.3614561 3.4739297 10.1792179 11.3981499 10.2381393 11.1660236 12.2993670 7.4918531 10.4580648 10.6175695 10.6383354 10.2915544 3.6755676 11.5367868 9.8021573 -0.8478815 10.2394659 8.4648859 0.4911861 6.0468206 10.6348111 9.4477720 10.1881767 9.4500656 2.8524384 9.0483354 11.2889942 11.6981741 9.6568220 8.8472315 0.00069327 0.00069327 -0.06397200 -0.06397200 0.00221930 0.00208050 0.00305220 0.00305220 -0.00156920 -0.00156920 -0.00156920 0.00069327 0.00069327 0.00000000 0.00000000 0.00000000 0.00235810 0.00235810 0.00124810 -0.00013862 0.00041593 -0.00097017 -0.00097017 -0.00097017 0.00069327 0.00069327 0.00069327 -0.00553750 0.00069327 0.00069327 -0.01106000 -0.06397200 0.00221930 0.00221930 0.00208050 0.00208050 0.00305220 0.00305220 0.00305220 -0.00041585 -0.00041585 -0.00156920 -0.00277070 -0.00277070 -0.00277070 -0.00277070 0.00069327 0.00069327 0.00000000 0.00000000 0.00000000 0.00000000 0.00235810 0.00235810 0.00235810 0.00124810 -0.00013862 -0.00013862 0.00041593 -0.00193990 -0.00097017 -0.00097017 0.00166420 0.00069327 0.00069327 -0.00553750 0.00124810 -0.00816240 -0.00816240 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.0513601 NA 4.2394668 10.1163440 11.4014129 8.0799290 11.1593808 8.3378698 9.6851090 1.7369512 11.5394820 11.5891803 11.7168671 4.1061975 1.1519887 7.9267900 4.7958604 11.4362488 11.5621894 10.4211298 9.6011518 1.1519887 7.9035469 10.3957721 6.8102143 3.5443246 NA NA 9.7913438 5.4739297 5.1061975 8.2153981 5.0099831 10.3041167 9.7065920 5.7369647 8.0618961 0.7369944 6.5949471 12.9333628 6.5357077 8.4397154 NA -0.8478815 8.0254475 0.7369944 1.7369512 NA 6.2500350 4.6786973 3.2394591 10.2421155 0.7369944 8.1003701 10.6327933 9.5571445 5.1743705 9.6508523 12.9603640 8.1206697 2.4739427 3.1520049 12.3820235 5.5095565 NA 3.7958604 0.1519887 14.142392 4.879921 8.738843 10.664744 10.054378 10.566160 13.871606 12.623170 8.784998 10.283860 12.815228 11.136422 8.395177 7.755629 2.151989 7.599086 11.380521 10.269646 12.465170 7.827960 13.949814 8.716153 9.265745 8.710424 7.729432 9.464807 6.651850 8.790439 11.455498 7.058893 NA 9.942352 8.601152 7.329473 11.945200 10.052870 10.961771 8.522691 9.488510 10.816895 6.464886 10.557740 9.736966 10.830603 10.168115 10.758871 8.910226 9.744460 10.320675 8.913554 NA 9.412205 6.643856 10.083479 7.129283 11.176104 4.906891 11.687278 10.179218 6.683385 14.170899 10.966185 10.586631 12.883004 9.568801 3.795860 NA 9.961771 9.705632 8.704672 TCGA-E2-A1IL 78 0 NA 118 breast stage iia t1c n1a m0 female 2009 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 1 4 3 4 4 5 6 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.387189e-07 29.4117647058824 5.88235294117647 5.88235294117647 29.4117647058824 29.4117647058824 10.8535286 10.3695313 12.4371795 10.4235159 8.0451005 8.3869282 11.5719259 9.0249227 9.6292280 13.2194022 10.7642993 10.5885621 1.6825284 13.2932917 4.9626369 9.8954611 7.7790574 8.3284461 10.5248809 13.3904442 2.4601397 13.6793571 8.3730274 9.4065571 10.9054979 10.2653445 -1.1246917 10.5838285 10.0985740 3.6300676 8.6793066 7.1372709 0.4601659 3.5756149 10.7068787 10.5338334 10.3279316 11.4825059 9.6671524 12.4150614 -0.1248490 11.2626545 14.3905367 9.0030538 10.5542158 11.9853326 11.6423255 4.4898833 6.1039948 9.1302042 12.1078963 1.4601135 11.0067111 4.3987403 4.4898833 4.9412660 9.6491390 11.5917808 10.5506917 12.1441561 13.1540606 8.3610051 10.9085986 10.8531710 11.6130567 11.6758733 5.6030952 11.5990498 10.4402776 -0.1248490 10.2349252 9.0723923 5.0050766 4.6825284 10.6124230 9.9399184 10.4478759 9.9506547 2.3345969 9.9941166 13.9683043 11.4880441 10.6776920 10.0557064 0.64781000 0.65940000 0.00013863 0.00741130 0.00930980 0.00708260 0.67715000 -0.71417000 0.00263570 0.00263570 -0.72906000 -0.00083160 -0.00083160 -0.00193990 -0.00193990 -0.00193990 -0.00207840 0.00013863 0.01056400 0.00000000 0.64649000 -0.02000100 -0.02000100 -0.02000100 -0.03422300 -0.03422300 -0.03422300 -0.01092200 -0.01174900 0.00055459 -0.01654500 0.00013863 0.00930980 0.01349200 0.00708260 0.00708260 0.67715000 -0.71417000 -0.71417000 0.00106210 0.00286830 0.00263570 -0.00152430 -0.00152430 -0.00152430 -0.00995650 -0.00083160 -0.00083160 -0.00193990 -0.00193990 -0.00193990 -0.00193990 -0.00207840 0.00013863 0.00208050 -0.70397000 -0.00581400 -0.00581400 -0.01202400 -0.73512000 -0.02000100 -0.02000100 0.00263570 -0.03422300 -0.03422300 -0.01092200 -0.00221680 -0.73178000 -0.73178000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.646 -0.101 -0.737 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.647 0.000 0.000 0.000 -0.732 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.677 -0.037 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.646 -0.101 -0.737 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.647 0.000 0.000 0.000 -0.732 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.677 -0.037 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1651944 NA 7.3056286 10.7985031 11.1304993 7.1763058 12.0843243 9.2311652 8.3948121 0.4601659 10.6499627 10.8944987 3.3346112 5.3014413 4.3670285 8.6233683 2.8751706 9.6090383 11.5675732 10.8088663 8.9546605 6.1697968 7.6857475 9.9168347 6.2150262 8.6793066 -0.1248490 NA 10.8470783 7.6728369 6.1513007 8.6679659 7.6267195 10.6541110 10.9986504 4.3987403 8.3139673 NA 8.2930283 11.9216176 8.9679329 7.5894212 NA 5.1231033 8.3589913 4.7820678 3.2674909 4.7820678 4.0451022 6.0399828 2.0450934 10.0236522 -1.1246917 8.0967626 10.9596519 9.6408761 4.3987403 10.3670287 12.9782995 7.5756156 3.5190260 2.3345969 11.2709775 2.0450934 -0.1248490 2.1971105 2.4601397 13.055677 4.547598 8.780563 13.293292 10.553014 10.978791 13.390444 13.559596 9.328446 11.124289 13.029836 8.248040 9.130204 9.332556 -0.124849 7.338700 11.272048 11.506807 12.320190 8.740909 14.251876 8.855315 4.084626 9.387916 8.007032 10.632874 5.460140 8.408506 10.764299 5.720667 3.630068 11.430963 5.897543 5.564476 10.879045 10.314487 10.865989 8.836625 8.243682 13.031022 5.045102 11.620913 10.327932 10.099177 10.008960 10.614112 10.305105 10.453548 10.939918 9.400696 NA 9.609038 6.907166 12.107896 4.123103 11.006711 6.701724 10.415735 9.649139 8.001880 13.470666 10.004459 10.400696 13.061677 10.170371 NA -1.124692 10.991520 10.871649 10.130204 TCGA-E2-A1IN 60 0 NA 675 breast stage i t1c n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 1 NA NA 4 1 5 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4.473685e-06 1.768666e-06 8.7431693989071 65.5737704918033 3.82513661202186 13.1147540983607 8.7431693989071 10.5127754 10.4228553 11.7112942 8.6250619 8.6931262 8.7653687 10.3461091 10.2557554 9.8597759 14.3035654 10.6357256 10.9767495 1.8246457 12.5128427 3.5836515 9.8500122 6.6749662 8.6270516 8.1521261 13.1266834 -0.8756719 13.8348919 2.7680784 9.8650589 11.0923467 6.7352446 0.1241958 12.0556195 10.0091536 1.1241958 9.2070343 7.2275081 1.2941355 3.9315791 9.6964465 10.1068571 8.0341128 11.8684231 10.0824101 11.1104175 6.1242206 11.8144362 14.8132624 8.2643980 9.6997309 10.8408250 10.8146545 4.2535053 4.8924056 8.9121226 10.9825895 -0.2908859 10.8069951 6.4325586 5.5250979 4.9315743 10.2441337 12.0775979 10.8350264 12.1690409 12.4491037 8.1548870 10.6752072 9.9925332 11.0778708 10.8770187 4.6633788 11.7778488 12.1085494 1.4461503 10.1960174 9.7837700 4.1060719 5.2840921 11.3651603 10.0011205 10.3712574 10.4416326 4.4461503 9.0265951 12.5704632 12.1312472 10.3044400 9.6477818 1.3748000 1.3748000 0.0155870 0.0155870 -0.0042929 0.7408100 0.4184800 0.0134920 1.1707000 1.1707000 1.1707000 -0.3697400 -0.3697400 -0.0091286 -0.0091286 -0.0091286 0.0317180 0.0317180 -0.3643600 0.0301690 -0.0034627 -1.0032000 0.0335490 0.0335490 -0.1672600 0.5879300 0.5829500 1.5125000 -0.0224690 -0.0221950 -0.3125600 0.0155870 -0.0042929 -0.0042929 0.7408100 0.7332200 0.4184800 0.0134920 0.0134920 0.0000000 0.0000000 -0.7517600 -0.0814720 -0.0814720 -0.0814720 -0.0814720 -0.3697400 -0.8012100 -0.0091286 -0.0091286 -0.0022663 -0.0022663 0.0317180 0.0317180 0.0317180 -0.3571500 0.0301690 0.0301690 -0.0103700 0.0461330 -1.2929000 0.0335490 -0.7535800 -0.1672600 0.5879300 0.3657500 0.2477800 -0.3600400 -0.3523600 -0.370 -0.370 0.000 0.000 0.000 0.000 -0.364 0.000 0.000 0.000 0.000 0.000 0.000 1.189 1.189 0.421 0.588 0.000 1.375 0.350 0.350 0.248 -0.360 -0.310 -0.310 0.000 0.000 0.000 0.000 0.741 0.741 0.405 0.000 0.000 0.000 0.419 1.171 0.000 0.000 0.000 0.000 -0.370 -0.370 0.000 0.000 0.000 0.000 -0.364 0.000 0.000 0.000 0.000 0.000 0.000 1.189 1.189 0.421 0.588 0.000 1.375 0.350 0.350 0.248 -0.360 -0.310 -0.310 0.000 0.000 0.000 0.000 0.741 0.741 0.405 0.000 0.000 0.000 0.419 1.171 0.000 0.000 0.000 0.000 8.4551369 -1.8756719 6.5918260 10.1118392 11.0277252 7.4089750 11.0586480 8.4859553 8.4938174 -0.8756719 11.2360077 11.7355998 1.5836635 4.0311128 3.7091803 8.1029305 4.1014988 10.0156240 11.3627740 10.9905329 9.3439936 4.2327452 8.0696640 9.8803592 5.1014988 4.0068635 0.1241958 NA 10.6752072 6.2483413 7.0519974 7.6220716 6.4049900 10.1969655 10.8768097 4.6320122 8.5357311 NA 7.6730419 12.4899272 7.9396033 7.8159635 -0.8756719 1.1241958 8.7895558 2.9315696 3.6160753 NA 3.2116820 4.7102334 2.1242289 10.1375426 0.1241958 7.9299638 10.7492438 10.1510891 4.3721442 9.1876151 11.6379475 8.0682000 2.7091803 4.1242206 10.2903830 3.0311128 -1.8756719 -1.8756719 2.2116975 13.521042 5.944399 8.729700 12.512843 9.976749 11.102752 13.126683 11.971081 9.307855 10.460448 13.356753 10.596149 8.912123 10.466850 2.124229 7.333673 12.103913 11.352588 11.807763 7.933184 13.464799 8.948383 4.516538 9.334282 8.133503 10.254317 6.367394 8.380429 10.635726 7.601978 6.072588 11.229965 5.400343 7.293142 10.992850 10.355441 10.803700 9.378067 8.448400 10.593353 4.078413 12.008765 8.034113 10.409911 9.843609 10.914568 9.736167 10.443045 10.756761 8.874927 3.852139 9.049908 7.180966 10.982590 4.353041 10.806995 9.165879 10.313646 10.244134 7.556908 14.334682 10.378363 10.734553 12.906194 10.659738 NA 2.583663 10.231437 10.106857 9.639427 TCGA-E2-A1IO 37 0 NA 1855 breast stage i t1c n0 m0 female 2009 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 1 NA NA 3 4 5 6 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 3.467973e-07 3.467973e-08 45.4545454545455 18.1818181818182 0 9.09090909090909 27.2727272727273 10.6317051 9.9261992 12.4123720 10.3487767 8.2214919 9.4320591 10.7266256 10.0321715 10.0907382 13.8091031 10.5878904 10.9333290 5.6020708 13.1510832 3.8540455 10.0115907 5.4512903 8.6225731 9.0022325 12.4005481 5.1232358 12.8289052 6.0362528 9.0659401 11.1373159 2.8165792 NA 9.7094769 9.2463668 4.1232358 8.2999663 8.0095163 1.1536108 5.6347356 9.9029204 10.1327966 9.2991173 10.9590848 10.7354379 11.9201386 2.7385733 11.4932741 15.1264848 9.2181280 10.0926990 11.0569894 11.6077375 5.1078050 6.9907121 9.6293431 11.3220729 -0.4312869 11.0789168 7.5286495 6.4755373 5.2410736 9.8552049 11.5045488 9.5721651 12.6037899 12.7782528 8.1778261 10.7787096 10.4417452 11.5523533 11.8411312 5.1385032 12.1078060 11.6887230 -0.4312869 10.5355131 9.4770398 4.5249350 5.4266271 9.5337099 9.8064546 10.3037801 10.5162841 3.1536108 7.9062689 12.9038979 12.6000899 10.1727370 10.1925287 0.0445740 0.0600790 -0.4264800 0.1340600 1.6472000 0.0119580 -0.4759600 -0.0188430 -0.4686500 -0.4686500 0.5707700 0.0550880 0.0550880 0.0297470 0.0297470 0.0297470 0.2667100 1.4319000 -0.4443700 0.1203500 0.0493980 -0.4870100 0.0175950 0.0228650 -0.0841300 -0.0841300 0.4359800 0.5854200 0.0300290 0.0300290 0.0000000 -0.4264800 0.0778620 -0.4386400 -0.4582200 -0.4582200 0.1410200 -0.0188430 -0.0188430 0.2449800 -0.0043963 -0.4686500 -0.4441500 -0.4749000 -0.4434500 0.4765000 0.0550880 -0.0335410 0.0297470 0.0297470 0.0297470 0.0297470 -0.4646700 -0.4576800 -0.4576800 -0.4443700 0.0937440 0.0937440 -0.4624700 -0.4828100 -0.4870100 0.0175950 -0.1598800 -0.0841300 -0.0841300 0.5854200 -0.4707800 -0.4991300 -0.4935000 0.000 0.000 0.000 0.000 -0.125 -0.125 -0.444 0.000 0.000 0.554 0.000 -0.487 0.000 -0.180 -0.180 0.000 0.000 0.000 0.000 0.585 0.585 0.000 -0.494 0.000 0.000 -0.415 -0.294 0.000 0.000 0.000 -0.458 0.000 0.000 0.173 0.000 -0.469 0.089 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.125 -0.125 -0.444 0.000 0.000 0.554 0.000 -0.487 0.000 -0.180 -0.180 0.000 0.000 0.000 0.000 0.585 0.585 0.000 -0.494 0.000 0.000 -0.415 -0.294 0.000 0.000 0.000 -0.458 0.000 0.000 0.173 0.000 -0.469 0.089 0.000 0.000 0.000 0.000 7.8655632 NA 5.2965675 10.7253623 10.9020821 6.6169164 10.6384326 9.6309700 8.6405118 3.5686524 10.8721426 11.6168701 4.0280829 5.5686463 3.6130365 8.1097440 4.4266271 10.5148224 11.6380969 10.5401907 9.0484275 2.8905829 8.1943560 9.8159814 7.8724280 5.2965675 3.5686524 -1.4312869 11.0645022 5.9864997 7.5544891 8.4141372 8.5686470 10.8953687 10.4281820 5.1833555 8.8459347 2.6561073 7.6293428 12.4717758 9.1685601 7.4815363 NA 7.7559992 7.6719352 0.8905634 5.2551495 0.5686159 6.9609646 4.3098456 4.3760055 10.4424757 0.1535460 8.8141998 9.7920455 9.0198584 6.0362528 10.0719761 12.0562360 8.5630006 3.6561073 4.2690855 10.5555558 4.4015349 NA 0.5686159 2.6561073 12.560018 5.623928 9.715852 13.151083 9.931139 9.737946 12.400548 13.226468 9.299966 11.135177 12.919379 10.676845 9.629343 8.722199 1.738552 7.187032 11.435540 12.276761 12.070236 6.835434 13.624902 9.236646 7.528649 8.886060 8.121316 11.563073 7.780535 8.140400 10.587890 6.481536 4.269086 11.336831 8.054476 6.895975 11.747779 11.134225 10.691475 7.770771 8.288036 11.941104 7.610307 11.776203 9.299117 10.398370 9.902920 11.634568 10.358588 11.104166 11.551997 10.003796 6.130890 9.265041 8.228536 11.322073 7.782966 11.078917 8.103922 11.704722 9.855205 7.937154 13.583147 10.214756 10.379620 12.846007 11.088775 1.568665 2.028074 10.550928 10.841277 10.622912 TCGA-E2-A1IU 60 0 NA 337 breast stage ia t1c n0 (mol+) m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 1 4 3 4 4 5 5 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.387189e-07 17.6470588235294 17.6470588235294 11.7647058823529 35.2941176470588 17.6470588235294 10.926709 9.824123 11.681359 9.959543 8.591004 9.414528 10.271190 9.246991 9.907385 12.983981 11.745639 10.539733 3.418001 13.392635 3.671758 9.414528 5.927015 8.343269 9.824777 12.702691 3.109879 13.049597 7.105578 9.562266 11.115769 6.772842 -1.282439 8.607824 11.901196 2.624452 7.361417 6.563050 NA 5.389987 10.156872 10.825758 11.502399 11.435451 10.198350 11.565401 6.531341 11.183127 14.294251 6.605146 9.789693 12.514310 11.334109 3.761955 6.660074 9.201376 12.881367 NA 11.410829 4.826086 5.648299 4.389987 10.671757 11.483261 10.638285 12.054067 12.957457 7.879951 10.979655 11.065860 11.439300 11.195824 5.332271 11.700019 9.768089 NA 10.209413 9.060746 3.178300 4.648299 10.295933 10.117906 10.112559 9.665927 4.575542 10.593693 12.520581 11.951330 9.418867 9.584066 -0.00041585 -0.00041585 0.00714050 0.00748920 0.00736090 0.20305000 0.00597000 0.00597000 0.00416320 0.00416320 0.02749700 -0.00083160 -0.00083160 0.17830000 3.65690000 0.65479000 0.00416320 0.00000000 -0.01312700 -0.01161100 0.00055459 0.01307400 0.01307400 0.01307400 0.01447000 0.01447000 -0.00278410 0.01488800 -0.00041585 -0.00041585 -0.00761010 0.00714050 0.00736090 0.00652620 0.20305000 0.20305000 0.00597000 0.00597000 0.00597000 -0.00277070 -0.00940460 0.00416320 -0.08519200 -0.08519200 -0.08519200 -0.08519200 -0.00083160 -0.00495100 0.17368000 -0.56634000 -0.59195000 -0.59195000 0.00416320 0.00000000 0.00152550 -0.01312700 -0.01161100 -0.01161100 0.00055459 -0.59253000 0.01307400 0.01307400 0.20366000 0.01447000 -0.00278410 0.01488800 -0.00833700 -0.02329200 -0.02329200 0.000 0.000 0.127 -0.592 0.000 0.000 0.000 0.000 0.000 0.307 -0.566 0.000 0.000 0.198 0.198 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.203 0.203 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.127 -0.592 0.000 0.000 0.000 0.000 0.000 0.307 -0.566 0.000 0.000 0.198 0.198 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.203 0.203 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6790099 NA 5.0926007 10.7513273 11.6564047 7.0283548 11.8395793 8.8895000 8.7915947 2.9654888 11.9202962 10.6828178 1.3025238 2.5249162 2.6244519 8.4674295 3.4724488 10.2411222 10.7364558 10.7385401 9.4640746 5.4180010 7.1646435 10.2557491 6.9073846 5.3322711 1.8874863 NA 11.0901533 6.4249187 6.9654876 8.0167682 6.2489408 10.0760191 9.8326038 4.8050241 8.3811181 -1.2824387 7.9487813 12.6870367 8.3469170 7.3864454 NA 2.1769929 8.1501022 -1.2824387 3.4724488 -1.2824387 5.3757728 6.6603682 3.3614175 10.3207228 2.1769929 9.2663820 10.3235026 9.7294863 4.4724488 9.5801975 12.2421019 7.1892355 2.6244519 2.6244519 15.0249567 2.7175613 NA 0.3025238 -0.2824387 14.9580776 5.1438260 9.2807564 13.3926351 10.4590271 10.6059229 12.7026906 12.3806735 8.5200765 10.9767150 12.8273908 10.3230397 9.2013761 7.4923475 0.7175613 7.7863382 10.7568220 11.049877 12.189362 7.201376 14.092087 8.648298 5.857113 8.842974 8.724588 10.222826 7.066288 6.118439 11.745639 5.984348 NA 10.960437 5.857113 6.814539 10.580972 9.886859 10.940355 8.737151 8.465753 12.867942 6.279802 10.255021 11.502399 10.773859 9.059635 11.853590 9.471613 9.990773 10.463234 8.613893 NA 8.987236 9.239023 12.881367 8.016768 11.410829 5.993686 10.941260 10.671757 6.836501 13.602255 10.310951 9.939751 12.702424 9.600967 2.302524 NA 10.414528 10.625202 9.425782 TCGA-E2-A1L6 44 0 NA 1648 breast stage iia t1c n1mi m0 female 2007 NA no infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 3 5 2 2 3 3 4 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.387189e-07 25 6.25 0 43.75 25 10.5641354 10.2203637 11.7635208 9.4866607 8.4001378 9.6268965 10.4888526 9.9979085 9.5359462 13.2551325 10.9701613 10.3417430 3.0728775 12.5529557 3.9326943 9.0636628 7.3458949 8.7124513 9.6421692 13.1301659 6.3347971 13.6593684 6.3732706 9.5768256 10.4176652 5.4265130 NA 10.8231054 10.5434973 4.7103050 7.2866557 7.6194849 -0.6820014 3.7442580 9.8759308 10.5087392 11.6977731 11.9082248 10.2590362 11.1184841 7.8474195 12.0382329 14.3315294 9.7562451 9.6483454 11.5285078 11.4868174 4.7774197 1.9029611 9.1814005 12.1013961 NA 11.3764878 4.9618455 7.3705566 4.2006299 10.6441371 12.0479279 10.4791205 13.1114395 12.9664586 8.5575870 11.1927779 10.8676313 11.5036384 11.0709964 5.0459103 12.0329853 10.3417430 0.3179986 10.2605031 8.9957084 3.9300466 5.3403557 10.7342584 10.2941947 9.8787990 9.8940004 3.7103050 9.9921808 13.2524627 12.1641646 9.8644008 9.4206205 0.4621200 0.4621200 -0.0096806 -0.0096806 -0.0128510 0.5107600 -0.0221950 -0.0221950 0.4218300 0.0391950 0.0413170 0.0024969 0.0024969 0.0000000 0.0000000 0.0000000 -0.0078863 -0.0078863 -0.0094046 0.0019418 0.0130740 0.0063871 0.0063871 0.0063871 0.0105640 0.0105640 0.0105640 0.0165650 0.0019418 0.0019418 -0.0102640 -0.0096806 -0.0128510 -0.0103700 -0.4897400 0.4236800 -0.0221950 -0.0221950 -0.0221950 -0.0099565 -0.0104190 -0.4775400 -0.4979800 0.0033299 0.0033299 0.0033299 0.0024969 0.0024969 0.0013868 0.0000000 0.0000000 0.0000000 -0.0078863 -0.0012473 -0.0012473 -0.0094046 0.0019418 0.0019418 0.0227250 -0.4949600 0.0063871 0.0063871 0.0037465 0.0105640 0.0105640 0.0165650 -0.0033243 0.0283410 0.0215910 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.495 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.424 0.424 0.000 0.000 0.000 0.000 -0.478 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.495 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.424 0.424 0.000 0.000 0.000 0.000 -0.478 0.000 0.000 0.000 0.000 0.000 8.6045462 NA 6.4421091 10.1433449 11.0691142 7.2507939 10.4520940 9.1597102 8.9803455 2.0184205 11.6553317 10.8722849 3.0184205 3.1253370 4.2487246 8.5964380 4.1253453 10.2816073 11.5014689 11.0386604 9.2729120 5.7609315 8.0114755 10.3211551 6.2605037 5.4778586 3.0184205 -0.6820014 10.9652222 6.8532634 7.0894780 8.0944219 7.3403566 10.3796230 10.6564465 6.4828951 7.8493701 NA 8.4702733 13.0260486 8.9546134 7.5444012 -1.6822329 3.2248738 8.8973046 5.4778586 4.4054547 -1.6822329 4.7609341 5.9709043 2.7774302 9.9806570 -1.6822329 8.7997880 10.5741973 9.6308716 4.5274395 10.1397626 12.1482067 7.8552067 1.9029611 3.4472750 13.4439267 2.0184205 NA 2.8415505 0.3179986 12.8765803 5.1634786 8.8474191 12.5529557 10.4619457 10.7552205 13.1301659 12.7571052 9.0501561 10.6351185 13.3290848 10.5228653 9.1814005 8.6068545 0.6398804 7.2457666 11.3725929 10.9083417 11.8430199 7.0430142 13.8870117 9.3389685 5.4265130 8.6821234 8.5016238 10.1527243 6.4626462 6.6886755 10.9701613 5.6033919 6.5611627 10.8871322 8.9859871 6.7515320 11.0354508 10.1213126 10.8058287 8.3727828 8.2981281 12.0033944 4.7609341 12.5460234 11.6977731 10.1810133 9.7241936 11.4541787 9.5335217 10.1305671 10.4294504 9.4759670 NA 9.4211387 7.0009836 12.1013961 6.0661818 11.3764878 6.6843110 10.6244235 10.6441371 6.8493701 14.0611400 10.3232623 10.5635413 12.9104456 10.1821747 2.0184205 0.3179986 10.6126093 10.4639208 10.0624020 TCGA-E2-A1L7 40 0 NA 1836 breast stage iiia t2 n2 m0 female 2009 NA yes infiltrating ductal carcinoma 7 white not hispanic or latino NA NA 4 2 1 2 1 1 1 1 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.699307e-06 2.774378e-07 6.89655172413793 15.5172413793103 1.72413793103448 37.9310344827586 37.9310344827586 10.27706697 9.86146506 11.98922066 9.19523513 8.96665916 9.14665497 10.39614193 10.32969556 9.42239701 12.25932663 11.89328443 10.47055812 2.27875794 10.91320665 2.86372044 9.30445195 7.10657760 8.18083212 9.02426482 12.31218160 4.41625876 12.30735538 6.36622078 10.04740615 11.26715929 7.81791739 NA 10.76216325 11.12644236 2.54178739 8.29668040 7.50757743 3.34915293 4.48039439 10.13860395 10.12173747 9.00259030 9.88682858 9.91900348 10.39510255 2.54178739 11.21126863 14.73133448 8.80035895 10.59933351 9.86071238 9.68899787 4.34914586 3.27875794 8.85467611 10.06077387 NA 10.87345642 5.72501581 7.18564953 5.34914940 8.84405103 12.26303464 9.80935994 12.68995177 12.83851807 6.43256361 11.62859267 11.25905246 11.54905394 11.84119183 5.12675402 12.92234427 11.54296660 -0.04319988 10.55488302 9.20238319 4.60126269 6.73161772 11.53378715 10.61459556 10.48918646 10.61816330 6.38309599 10.40597917 11.81617116 12.00259016 10.34914796 10.00735937 0.1007400 -0.7736300 0.0705300 0.1733200 0.0269350 0.7596800 -0.7847900 0.7798400 -0.7498500 -0.7498500 1.3746000 0.0127950 0.0428740 0.1061400 0.0244080 0.0244080 -0.0842620 -0.2299400 0.0000000 0.0888370 1.0180000 -0.7297600 -0.7297600 0.0806010 0.0143300 -0.0537150 0.0758470 0.1219600 -0.2369200 0.1007400 -0.1026300 -0.6838700 0.0202030 -0.7628700 -0.8317100 0.4973500 -0.7847900 0.0172640 -0.0082075 -0.7662900 -0.7346800 -0.6618900 -0.7831100 0.0668640 0.7833100 -0.5856900 -0.7238500 -0.8411100 -1.1118000 0.0244080 -0.7580600 -0.7789700 -0.0842620 -0.2142900 -0.7544400 0.0000000 -0.7526200 0.2134500 -0.5054600 -0.7296700 -0.7297600 -1.2929000 0.8345100 0.0351440 -0.2220700 -0.7706500 0.0200630 0.0698120 -0.0164290 -0.727 -0.727 -0.711 -0.711 -0.230 -0.230 0.000 0.000 -0.481 -0.730 -0.730 -0.716 0.000 0.858 0.858 0.000 0.000 0.162 0.162 0.122 0.122 0.000 0.000 0.000 0.000 -0.203 -0.203 -0.763 -0.763 -0.234 -0.234 0.000 0.000 -0.766 -0.766 -0.749 0.194 0.000 0.000 -0.169 -0.169 -0.727 -0.727 -0.711 -0.711 -0.230 -0.230 0.000 0.000 -0.481 -0.730 -0.730 -0.716 0.000 0.858 0.858 0.000 0.000 0.162 0.162 0.122 0.122 0.000 0.000 0.000 0.000 -0.203 -0.203 -0.763 -0.763 -0.234 -0.234 0.000 0.000 -0.766 -0.766 -0.749 0.194 0.000 0.000 -0.169 -0.169 8.94693434 0.54181217 4.91102520 10.59707542 11.45243575 7.27726973 10.47548367 8.33137023 8.69201424 -0.04319988 12.07414892 11.75972448 9.56230998 1.76417628 3.41625876 8.42239701 4.38309599 12.42481808 11.89273219 11.03197538 9.31658000 2.12674164 9.39769966 9.58982564 7.30112667 5.55674208 2.76417628 NA 9.69407785 7.37045813 7.65727057 8.68475107 4.88756914 11.13969657 10.68772516 4.95683264 9.40184525 NA 6.58618677 12.35303388 8.35557398 6.78972012 NA -0.04319988 7.71171790 3.34915293 3.34915293 NA 7.20000403 3.48852786 4.12675815 10.86859695 NA 9.18324259 10.91791839 10.21421832 7.69829767 9.73408584 14.54987142 8.97085107 7.13673996 4.31438475 12.35423775 11.16689297 -1.04305123 0.95680012 -1.04305123 8.89282055 7.87867140 8.37045856 10.91320665 10.66892752 9.03631540 12.31218160 13.00096844 9.55565532 10.89273215 12.56566283 11.58253935 8.85467611 7.60788213 -0.04319988 7.72501513 9.76499032 11.307770 12.176302 7.200004 13.624826 8.833347 7.987498 8.580712 7.578882 10.192228 7.691540 4.956833 11.893284 10.069922 -1.043051 10.635871 9.307770 9.432007 9.620389 9.709211 10.509500 6.984736 9.360908 9.930528 6.534259 11.136998 9.002590 10.079011 10.444671 10.689846 8.796034 10.913570 11.266307 8.631023 2.657274 9.141768 10.014457 10.060774 7.126755 10.873456 6.340536 10.630140 8.844051 8.067966 13.973204 10.370458 10.027622 11.679851 11.681984 3.863720 1.541812 10.491620 10.305559 9.891259 TCGA-E2-A1L8 52 0 NA 2240 breast stage iib t2 n1a m0 female 2008 NA yes infiltrating lobular carcinoma 2 black or african american not hispanic or latino NA NA 2 1 6 3 4 1 5 6 4 3 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.733986e-07 8 24 4 24 40 11.21358313 9.97795488 11.20863394 8.86506078 9.27247676 10.16245704 9.60181665 10.29988295 9.82735160 10.62800291 10.51025839 10.78586372 1.24616483 12.53353359 3.43879850 9.22588247 5.05350672 8.80402483 10.83887497 13.39008080 1.43877190 14.29117928 3.72420277 9.80650016 9.92462533 8.05534481 0.02375214 8.19201263 10.88974951 1.24616483 6.08984768 8.74827236 NA 4.43879850 10.02234895 10.72188442 10.07542072 11.03568466 10.01716878 10.79497293 2.52626917 11.37414535 13.82189282 7.24981791 8.70792264 10.98327760 11.50337045 4.58854075 -1.56106846 9.07179136 11.87680818 0.02375214 12.71884185 5.72419731 6.00103882 4.02376101 10.43102638 12.04033476 9.92361897 12.29658273 13.12617177 8.45977586 11.63938819 11.37415638 11.69249585 10.61247322 4.27168712 12.27602978 12.76859242 0.43882511 10.56324052 8.71724561 3.43970292 4.93064746 10.96211301 9.95449587 10.11739622 9.67660363 2.02375214 8.67600606 13.53551123 12.53303875 10.19326612 9.46601098 0.7714600 0.7699100 0.0199870 0.0320640 -0.3535600 0.0565780 -0.3601700 -0.3601700 -0.8087800 -0.3564200 -0.3564200 0.0337070 0.0446380 -0.3584600 -0.3584600 -0.3584600 0.0171880 0.1424300 -0.3523100 0.0436470 -0.3828600 -0.3902400 0.0103490 0.0103490 0.0000000 0.0000000 0.0081204 0.0360120 -0.3699200 -0.3699200 0.0185870 0.0320640 -0.3619900 -0.3542500 0.0565780 0.0565780 -0.3601700 -0.3601700 -0.3601700 0.0415230 -0.3614200 -0.8087800 0.0444970 0.0444970 0.0444970 0.0254550 0.0446380 0.0446380 -0.3584600 -0.3584600 -0.3587100 -0.3704300 -0.8158500 0.1424300 0.1424300 -0.3523100 0.0436470 0.0436470 -0.3666400 -0.3857800 -0.3902400 0.0103490 0.4325100 0.0000000 0.0000000 0.0360120 -0.3649400 -0.3866700 -0.3881200 0.000 0.000 -0.358 -0.358 0.000 0.107 -0.352 0.000 -0.383 0.399 -0.375 -0.390 0.000 0.433 0.433 0.000 0.000 0.402 0.771 0.000 0.000 -0.365 -0.387 0.000 0.000 0.000 0.000 -0.362 -0.362 0.000 0.000 -0.360 -0.360 0.000 -0.361 -0.809 -0.356 0.000 0.000 -0.134 -0.134 0.000 0.000 -0.358 -0.358 0.000 0.107 -0.352 0.000 -0.383 0.399 -0.375 -0.390 0.000 0.433 0.433 0.000 0.000 0.402 0.771 0.000 0.000 -0.365 -0.387 0.000 0.000 0.000 0.000 -0.362 -0.362 0.000 0.000 -0.360 -0.360 0.000 -0.361 -0.809 -0.356 0.000 0.000 -0.134 -0.134 8.73685852 NA 6.23969590 10.30684698 11.42357056 7.18675408 10.87784776 8.89381511 9.28392548 NA 12.45647445 11.12595299 3.13924027 7.85242401 2.96236393 8.18698876 4.43879850 10.82950243 10.98376048 11.21954089 9.58536482 0.02375214 8.69264340 10.37543405 6.03125403 8.14096879 1.60871464 -1.56106846 10.81871590 7.77418614 6.58345440 6.44442026 5.38131106 9.81817439 11.01054874 3.64824684 7.29988295 NA 7.62119034 12.58584196 9.23807771 7.49949194 NA -0.56128132 9.37174899 0.02375214 3.43879850 NA 5.45002349 5.22041896 -0.56128132 10.04889810 NA 7.50488492 10.28232466 10.14053571 4.52625665 10.58313572 12.74713510 8.01622496 4.27168712 4.08265150 12.03125313 2.96236393 -0.56128132 0.76068935 1.24616483 12.001089 4.648247 8.510259 12.533534 10.049369 11.483361 13.390081 11.542903 8.708320 10.730830 14.133317 10.524932 9.071791 9.736286 NA 7.640920 11.744715 10.8203390 11.8730334 7.9002757 13.3793804 9.4493243 5.3813111 9.6831599 8.1633100 10.6378150 5.1392362 7.9485711 10.5102584 6.8311134 1.4387719 11.7332732 8.4667022 5.8767551 10.0745141 10.8513659 11.1754094 8.1920126 7.1322828 11.7615693 5.7963486 13.0223937 10.0754207 11.4089020 9.6068414 11.0783629 8.6961841 10.1059076 10.5690449 8.2003474 0.4388251 8.7157695 9.7630048 11.8768082 6.6914616 12.7188418 7.0048497 10.2838940 10.4310264 6.6137217 14.2058425 10.2307729 10.7573389 12.9827945 9.9180712 NA 0.4388251 10.6218110 10.1760435 9.8305767 TCGA-E2-A1L9 40 0 NA 598 breast stage iia t1c n1mi m0 female 2009 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 3 1 NA NA 4 1 5 6 4 1 0 0 0 4 0 5 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.387189e-07 25 15 0 40 20 10.0968767 9.9992162 11.4901404 8.8068966 8.4918964 10.1099521 9.5521715 10.5925114 10.3136798 13.5898338 10.2203056 11.4258873 0.6931412 12.3328720 2.9155400 9.3935942 7.0565597 8.4222086 7.4391086 12.8988459 0.6931412 14.1858005 3.4657394 10.1367888 10.6889217 8.3370108 0.6931412 7.1503982 9.7610369 2.6931635 6.7081044 7.7520481 NA 4.1956547 9.0746976 10.4772440 10.1099521 11.2644331 10.0940340 10.5454239 11.7636109 11.4683532 15.2715370 9.1597001 9.7863520 11.1392039 10.9893059 4.1081899 3.3935947 8.6521903 11.7711941 -0.8919105 11.5884773 5.9410828 6.9123229 5.3078656 10.6938587 11.8260826 10.7933788 12.7051388 12.9732003 7.7339007 11.2050718 10.4865275 11.3007930 10.8732708 3.6931524 11.8400413 10.3658745 -1.8916428 10.5194381 9.0667447 2.5832784 6.0507063 11.2303729 10.5727377 9.8198589 9.6656557 3.0623808 10.0652940 13.5843370 11.3990748 10.1367888 9.7872321 1.006100 1.006100 -0.026714 -0.023977 0.654980 0.128300 -0.028044 -0.028044 -0.026750 -0.026750 -0.024251 -0.031632 -0.031632 -0.031905 -0.034086 -0.034086 0.000000 0.000000 0.129480 0.129330 0.028749 -0.046596 -0.046596 -0.045427 -0.047395 -0.047395 -0.047395 0.114330 -0.034904 -0.034904 0.060936 -0.026714 -0.027124 -0.018765 0.128300 0.128300 -0.028044 -0.028044 -0.033033 0.140580 0.140580 -0.026750 0.478900 0.478900 0.478900 0.478900 -0.031632 -0.031632 -0.031905 -0.031905 -0.034086 -0.034086 0.000000 0.000000 0.000000 0.129480 0.108580 0.108910 0.032845 -0.054960 -0.046596 -0.046596 -0.031086 -0.047395 -0.047395 0.114330 0.121960 -0.050370 -0.050370 0.000 0.000 0.000 0.000 0.000 0.000 0.129 0.109 0.000 1.018 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.006 0.114 0.114 0.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.128 0.000 0.000 0.141 0.141 0.000 0.000 0.479 0.479 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.129 0.109 0.000 1.018 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.006 0.114 0.114 0.122 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.128 0.000 0.000 0.141 0.141 0.000 0.000 0.479 0.479 0.000 0.000 8.3176455 NA 5.8563857 10.4139688 11.3828613 6.8758132 10.0418827 9.1918974 8.5746253 -0.3068588 11.7770770 11.6644538 7.6140038 2.6931635 4.1081899 8.2579389 4.2374719 10.8659987 11.3889627 11.2445423 9.9743118 2.9661720 7.9754708 10.1736082 5.9347406 6.4613386 2.8630861 NA 10.7074075 4.5005089 7.9379146 7.7929406 6.6893928 9.7412507 10.7423224 3.0150872 7.5069359 1.5676428 8.2693240 12.4643688 8.2348964 7.5859503 0.1082233 1.1082233 8.3525559 3.5676185 3.7229031 NA 4.9155448 4.9167059 0.1082233 10.5573407 NA 6.8086322 10.6388421 9.9957934 5.8563857 9.2730990 13.1102158 8.7502437 3.7520528 3.9908369 11.0433570 3.0150872 NA 1.6931412 1.9155591 12.637121 5.430121 9.817707 12.332872 10.628074 11.068737 12.898846 11.888424 9.344206 10.319776 13.435499 8.815551 8.652190 8.496209 1.693141 7.792941 10.623892 11.3781952 12.1119734 7.3103156 13.3435679 9.5495800 5.5260438 8.7655105 8.2918273 10.8747665 5.9473950 9.1423031 10.2203056 6.7118184 2.4301247 11.1873434 5.8155524 6.9761815 11.6851487 10.5368139 10.9491666 8.8580615 7.8429015 10.2933772 4.7664043 12.3593615 10.1099521 10.8120955 9.5422989 10.3799468 9.8003716 10.6105266 10.9468050 8.9315593 0.9155591 9.5696151 7.5234898 11.7711941 3.5676185 11.5884773 9.0455658 11.1077411 10.6938587 7.1110073 13.7914608 10.3688176 10.6851487 13.1782291 10.4905459 0.9155591 NA 10.0800948 10.2818692 9.8730635 TCGA-E2-A1LA 59 0 NA 748 breast stage iia t1c n1a m0 female 2009 NA no infiltrating ductal carcinoma 1 NA not hispanic or latino NA NA 1 3 NA NA 1 1 5 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.803346e-06 7.282743e-07 8.21917808219178 13.6986301369863 8.21917808219178 34.2465753424658 35.6164383561644 10.4494674 8.7008225 10.5667095 7.7085170 9.8221038 8.8488082 8.9830164 9.9300319 10.5276632 13.5429139 11.5703033 10.4713406 1.4169478 13.3651471 2.5324416 10.1168240 5.4467095 8.5582179 8.9625704 13.1659938 2.2914267 14.0499576 4.7146412 9.8819029 10.9577362 8.4540517 2.5324416 11.3557750 9.8270603 2.0019103 6.6067872 7.0168751 NA 6.4018557 8.6489834 9.6680501 9.1707363 10.4457894 9.3663028 10.2909191 2.2914267 11.7898275 14.6396315 6.6493668 9.4411786 10.2248539 10.5397903 4.4758566 -1.1681228 8.7818265 10.7100508 -0.1679607 10.8390271 5.0799285 6.7207436 5.3711581 9.8404285 11.6515803 9.4893183 11.4377109 12.4335386 8.8418285 10.9515895 10.3092521 10.8678299 9.6190861 2.5324416 12.2363432 11.4487784 NA 10.2189401 8.6617225 3.3655666 4.8092807 10.3774471 10.2687115 10.6166348 9.6084330 1.1539350 7.7358816 11.8818484 10.9950205 9.4785585 9.4713405 0.60430000 0.00249690 -0.44232000 0.54630000 0.17784000 0.07182200 0.00000000 -0.53053000 0.01642500 0.01642500 1.06950000 0.00013863 0.01391100 -0.13755000 0.46707000 -0.55507000 -0.53378000 0.11038000 0.05722600 0.01782400 1.46650000 -0.54391000 0.49286000 0.49286000 -0.05536400 -0.02562000 -0.02562000 0.07843800 -0.56087000 -0.53073000 -0.02985700 0.02525000 0.05010800 0.51472000 0.07182200 -0.51373000 0.00000000 -0.53053000 -0.53744000 -0.01367700 0.01293400 -0.53885000 -0.53510000 -0.53510000 0.00194180 0.00194180 0.01391100 0.01391100 0.45990000 0.46707000 -0.51589000 -0.51589000 -0.14989000 0.11038000 0.01964300 -0.52010000 -0.54472000 0.00917050 0.38816000 -0.49996000 -0.54391000 0.49286000 -0.06705600 -0.05536400 -0.02562000 0.07843800 -0.04421300 -0.01931400 -0.01931400 0.000 0.000 -0.516 -0.516 -0.150 0.000 0.000 0.000 -0.542 0.000 -0.500 -0.005 0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.128 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.526 -0.535 0.000 -0.434 0.000 0.000 0.000 -0.516 -0.516 -0.150 0.000 0.000 0.000 -0.542 0.000 -0.500 -0.005 0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.128 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.526 -0.535 0.000 -0.434 0.000 9.7538408 NA 7.4577084 10.8397280 11.6557652 7.6973930 11.0644208 8.1479421 9.8663173 NA 12.2597055 12.0567281 3.5868848 4.6648924 3.5324416 7.1127710 4.9612807 11.5509608 11.6341123 11.0529827 9.8695468 2.4169748 8.5359033 10.4239897 7.2540649 5.4758566 3.1539350 NA 10.1584293 6.6837484 5.7627368 7.3865885 4.7146412 11.1081447 9.9925016 3.7388867 8.8709189 NA 6.0019238 12.2197480 8.6034895 7.6166349 -1.1681228 5.5044265 9.0019249 5.3238528 2.5324416 -0.1679607 7.2200174 3.6904730 3.4169613 10.6644944 -1.1681228 6.1174021 10.1961345 9.8149935 6.2582645 10.4749541 13.0238302 8.4169626 6.4540525 4.4169613 12.2577403 2.5324416 NA -0.1679607 0.4169478 13.9871711 5.8092807 9.3457275 13.3651471 10.4821541 10.0882085 13.1659938 14.2042188 8.1403390 9.4955581 13.0732383 11.9197942 8.7818265 8.2975661 0.4169478 7.9766581 10.9444394 10.8089220 12.2623217 7.3278553 13.2361422 9.1606747 6.8818481 9.3951961 9.0168751 9.7691825 7.4613567 5.8319988 11.5703033 7.5462455 -1.1681228 11.0993718 4.8543697 7.3043659 9.7131138 10.5827069 11.0893877 8.1334962 10.1369215 10.4197774 7.5289674 12.2390737 9.1707363 10.5035409 10.8386766 10.4075392 9.1057954 10.4425634 10.4207145 7.1081240 NA 8.1654683 7.0656197 10.7100508 8.3614306 10.8390271 6.2498530 10.8828688 9.8404285 7.0569184 13.2007791 10.1334961 10.2318118 12.2367423 10.6723844 2.4169748 -0.1679607 10.0390142 9.4337707 9.5927198 TCGA-E2-A1LB 41 0 NA 2306 breast stage iib t2 n1 m0 female 2008 NA yes infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 3 5 5 1 2 6 5 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 2.427581e-07 14.2857142857143 48.5714285714286 0 14.2857142857143 22.8571428571429 9.3305313 10.3795248 11.3897069 8.3455543 8.7585977 9.9929134 9.1089776 9.5980892 10.2989791 14.5811587 10.2256283 10.7435539 0.4307135 17.8751763 6.4456208 9.5154793 6.1124958 8.2927919 6.0055796 13.0798523 -1.1542490 10.5365794 -0.1542490 10.0056302 11.0639689 8.7191526 0.8456707 10.7409051 10.0423105 1.1676148 7.6594893 7.9672418 -1.1542490 4.1311120 10.3076993 9.7122147 9.8770651 9.9364825 10.2396352 10.2672474 12.3353056 9.4165130 14.5923540 8.8946993 10.5829516 11.2103903 9.8336830 4.1676389 2.0156403 8.3051402 11.8763756 NA 10.7149167 3.7525987 4.9542335 4.7999058 10.0715184 11.5498282 10.2315709 11.3480430 12.6209072 6.3926025 10.7233760 9.2319481 10.8100493 10.5491795 4.2380225 11.4601883 9.3712293 NA 10.0799271 8.9037002 2.4318636 4.0551609 11.2323793 10.0870958 9.3234667 9.4278504 3.1676309 9.8421819 12.3014209 11.2010595 9.9285228 9.3395639 -0.00185920 0.00930980 0.00624810 0.00903120 -0.00097017 0.00750000 0.03242200 0.04230700 0.04103400 -0.61508000 0.02356600 0.00249690 0.00235810 0.00597000 0.00597000 0.00597000 -0.00429290 -0.00429290 0.01419000 0.02988800 -0.00069303 0.00221930 3.65690000 0.05840100 -0.03886500 -0.01546600 -0.01560400 0.00638710 -0.00185920 -0.00185920 -0.00110870 0.00027728 -0.03993700 -0.00097017 0.00346010 0.00027728 0.03242200 0.04230700 -0.66901000 0.01140000 -0.64462000 -0.64123000 -0.64236000 -1.29290000 -0.63937000 -0.00380610 0.00235810 -0.67417000 -0.00995650 0.00597000 0.00597000 0.00597000 -0.00429290 -0.00429290 0.59730000 0.01419000 0.02034400 0.02412700 -0.66346000 0.00763920 0.00221930 -0.63680000 -0.01680700 -0.03886500 -0.01546600 0.00638710 -0.00595220 -0.02999400 -0.02999400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.645 0.000 0.000 -0.628 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.645 0.000 0.000 -0.628 -0.628 0.000 0.000 8.5871756 8.8343930 4.8680743 10.7164584 12.0524176 6.4956120 11.5968340 8.1688085 9.0721205 NA 11.8945359 11.1439773 1.6530600 5.5039211 2.1676470 7.7252919 8.4212477 9.4269090 11.8558868 9.7823463 8.6849123 3.6530600 8.0721208 10.6678809 6.4604182 13.8578965 3.7525987 NA 12.2706620 2.8457108 6.5668075 8.6482249 7.7615878 10.0908689 9.4344231 1.8457108 8.2229190 NA 7.9463706 12.5359247 7.8114929 8.2803365 NA 7.1721374 7.8114929 -0.1542490 5.1311120 7.0793280 2.6530600 6.3455543 2.0156403 12.9236090 NA 6.9594502 11.3061644 9.8308389 3.3692710 9.9743472 12.0253066 8.5565149 2.4306600 3.0936278 10.8161739 3.5461536 NA -0.1542490 0.8456707 12.443977 6.194436 9.452114 17.875176 10.798814 11.236146 13.079852 11.113080 9.252976 10.475976 13.068051 8.138030 8.305140 6.697457 NA 8.498553 10.632795 11.166791 12.393808 5.943741 15.575767 9.113666 5.238026 9.129954 7.369270 10.312285 6.518134 8.892832 10.225628 4.131112 NA 10.413665 3.015640 6.988122 11.363132 10.832617 11.269350 8.868076 9.589701 9.154047 5.691199 10.114964 9.877065 10.186115 10.095415 9.580418 9.024373 8.194437 10.462717 8.549612 NA 9.973064 8.496778 11.876376 5.716075 10.714917 7.848523 10.103945 10.071518 7.557134 13.738204 10.596415 11.173261 12.163545 10.617198 NA NA 10.302576 10.728351 9.220748 TCGA-E2-A1LE 71 1 879 NA breast stage iiic t2 n3a m0 female 2008 NA yes infiltrating ductal carcinoma 27 white not hispanic or latino NA NA 3 2 7 1 2 6 1 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.595268e-06 4.161568e-07 21.3114754098361 27.8688524590164 8.19672131147541 26.2295081967213 16.3934426229508 8.7288120 9.4192492 11.3371019 8.2010143 8.2856662 10.2098099 9.8106741 10.2082616 11.5146152 14.2362269 9.9244237 10.6366622 0.3450557 17.4757917 4.0820724 10.6628972 6.0639257 8.1286517 5.5283306 11.5474357 NA 11.3586631 5.9300702 9.4221371 10.8505886 6.2679402 -1.2399068 10.3977528 10.3242948 2.5674968 9.0988817 7.2954209 NA 4.6181270 8.5977732 9.4812444 8.8262345 11.0368513 9.6938359 10.4518888 11.7643657 10.0104436 14.8413790 6.5570930 10.6905130 9.8038562 11.6504096 4.8686720 8.3469852 8.0977672 12.6001363 1.3451125 10.7562657 5.8476086 6.3300008 4.6427882 10.5902643 11.7063205 10.7466984 11.7731189 12.6449836 8.0843258 10.2056774 9.3985812 11.0721773 10.5767289 3.8045389 11.4323496 9.4923127 -1.2399068 10.0977672 8.7488298 2.6708856 5.4743906 11.1845740 9.6945733 9.7417125 9.1121887 1.7601358 8.3949565 12.9545943 12.2547509 9.4120939 10.4352202 0.0029133 -0.6041300 1.0272000 -0.0209610 -0.0051227 0.0384890 -0.0042929 -0.5352000 -0.5306400 -0.5306400 0.9657600 0.0048579 0.0098669 -0.5263400 0.0065280 -0.0038779 0.0390540 -0.0022168 0.1052600 -0.5290000 -0.5350000 0.0304510 3.6569000 -0.0099565 0.5308100 -0.5109400 0.0081959 0.0207630 0.0227250 -0.0081624 0.4432500 -0.5362200 0.0239870 0.0116790 -0.0179410 -0.0223320 -0.0042929 -0.5411800 -0.5466300 0.5535400 -0.0161540 -0.5156800 -0.5190700 -0.5114600 0.0130740 1.1029000 -0.0085732 0.0158660 -0.5512600 0.0065280 0.5410100 0.5711300 -0.0100940 0.0058309 0.0084743 0.0589910 -0.5390600 -0.5390600 0.5514200 0.0555150 -0.5087700 -0.5095000 -0.5255300 0.5818400 -0.0310860 0.0383470 0.5159400 -0.4980900 -0.5177400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 0.551 0.000 0.000 -0.499 0.000 -0.521 -0.521 0.531 0.000 0.000 0.000 0.000 0.000 0.583 -0.508 0.451 0.451 -0.531 0.000 0.000 0.000 0.000 0.000 -0.526 -0.526 0.478 0.000 -0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 0.551 0.000 0.000 -0.499 0.000 -0.521 -0.521 0.531 0.000 0.000 0.000 0.000 0.000 0.583 -0.508 0.451 0.451 -0.531 0.000 0.000 0.000 0.000 0.000 -0.526 -0.526 0.478 0.000 -0.473 0.000 0.000 0.000 0.000 0.000 7.6908829 6.7880514 6.6790085 11.2154725 11.9595109 6.9037831 11.0122193 8.9467177 9.1861479 2.4605853 13.5175353 11.3323268 4.3748517 0.3450557 2.4605853 7.8342865 8.3051096 10.8552126 11.5043484 9.7811253 8.5415052 4.3748517 8.1885053 10.2368915 8.0977672 6.3895014 6.7544987 NA 10.5922441 4.6908808 7.2837070 8.2236697 9.2175262 9.9505132 9.4510163 4.6670349 9.7273715 -0.2399068 8.2499933 11.7982069 8.9805235 10.0730282 1.3451125 5.4466466 7.4778214 -0.2399068 6.4040022 NA 6.8476086 4.1194558 3.8045389 11.1538039 -0.2399068 9.2154726 10.6507896 9.7445638 6.4466450 10.1253741 12.2730092 8.5431436 2.7601358 5.0999937 9.2051601 3.5674968 0.3450557 2.2195867 3.1524593 11.6491890 6.9647163 9.3646985 17.4757917 10.4670729 10.4897660 11.5474357 9.3366295 9.5787274 10.0679154 12.5805237 8.9622691 8.0977672 7.1905981 -0.2399068 7.4183569 11.0131063 12.007479 12.950510 7.283707 14.659831 9.760145 8.427257 9.476965 8.017604 11.240938 7.922537 8.854223 9.924424 8.113292 -1.239907 9.925052 7.754499 8.455600 11.928661 11.015469 9.847608 7.303177 9.878438 8.068484 5.988964 11.969687 8.826234 9.914330 10.464049 9.587488 10.805222 10.355869 11.376005 7.981732 9.330950 10.386995 7.532922 12.600136 5.360059 10.756266 7.580324 12.161825 10.590264 7.271898 13.967693 10.326675 10.482953 11.759793 12.657424 3.404004 NA 9.780431 9.188506 10.078688 TCGA-E2-A1LG 50 0 NA 1523 breast stage iia t2 n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 black or african american not hispanic or latino NA NA 5 4 5 3 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 2.878418e-06 1.075072e-06 11.1111111111111 73.5042735042735 3.41880341880342 9.4017094017094 2.56410256410256 10.5260185 10.8355733 10.8949518 9.2540013 8.4402824 9.8165356 10.2231953 10.6092150 10.9439079 9.9285311 11.2148308 11.1110812 0.2968979 13.2472274 2.1042696 9.4836326 2.6892097 7.9116089 7.7522268 1.7563402 NA 7.2968997 7.4842517 8.9262560 11.4013343 5.7887536 1.9973285 10.9355615 10.8280370 -1.7032196 9.7827286 8.5305191 NA 3.6892209 9.3025238 11.1730325 8.4755640 11.3871772 9.0872477 10.9798939 -1.7032196 9.5589942 14.2651161 6.6129540 8.3467477 10.9984224 11.2503682 3.4261842 -1.7032196 9.4093387 12.3390716 -1.7032196 10.8440349 3.6188260 6.2798928 3.8204649 7.2127785 12.4377291 9.9732971 12.4745524 13.3118351 4.3629888 11.4098274 11.1825957 11.6675867 10.5486775 4.1297858 11.7416554 11.8448783 4.1795429 8.9816480 8.4210204 2.4692348 3.4668229 11.3301502 11.3727127 9.8639047 9.0179984 -0.7029847 12.4514801 14.2328700 10.8157983 9.5507468 9.0945607 0.36571000 0.40926000 0.44103000 0.44103000 -0.49257000 0.46363000 0.39099000 -0.43790000 2.01860000 2.01860000 1.55160000 -0.48786000 -0.48786000 -0.00652180 -0.00652180 -0.00652180 -0.01355600 -0.01355600 1.57330000 0.37708000 0.03917800 -0.49508000 -0.00070985 -0.00070985 1.33360000 0.35184000 0.35184000 -0.01231700 -0.49856000 -0.49101000 -0.01499100 0.44103000 -0.49257000 -0.48514000 0.40692000 0.40692000 0.42181000 -0.43790000 -0.43790000 0.00136990 0.00136990 -1.05190000 0.01291700 0.00776140 0.00776140 -0.00472460 -0.48786000 -0.50379000 -0.00652180 -0.00652180 -0.00652180 -0.00652180 -0.01355600 -0.01355600 -0.49017000 -0.97068000 0.37708000 0.37708000 0.03917800 -0.48828000 -0.49508000 -0.00070985 0.00000000 -1.01370000 0.35184000 -0.03886600 -0.04646400 -0.05295300 0.42837000 -0.488 -0.488 0.000 0.000 0.000 0.000 -0.526 0.377 0.000 0.451 -0.026 -0.494 0.000 0.000 0.000 0.352 0.352 -0.118 0.366 0.000 0.000 0.458 0.000 0.000 0.000 0.441 0.441 -0.493 -0.493 0.407 0.407 0.391 -0.047 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 -0.488 -0.488 0.000 0.000 0.000 0.000 -0.526 0.377 0.000 0.451 -0.026 -0.494 0.000 0.000 0.000 0.352 0.352 -0.118 0.366 0.000 0.000 0.458 0.000 0.000 0.000 0.441 0.441 -0.493 -0.493 0.407 0.407 0.391 -0.047 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 7.8762155 NA 5.6006801 9.7263060 11.7506843 5.9349741 11.7451447 5.3859521 8.4946936 NA 12.8730293 10.7911149 1.7563402 -1.7032196 2.7563402 7.5542872 7.5281204 13.2553161 11.5260185 11.0617709 8.7907548 NA 8.5400734 8.7583788 5.3192675 11.0648768 5.0248205 -1.7032196 10.9292130 -0.7029847 8.5926682 8.4338904 5.5353034 9.7040290 11.1062655 1.8818604 10.0798975 5.9551105 7.9710917 12.8608701 8.1345275 10.6086477 NA 3.2510980 8.5531082 -1.7032196 5.4054240 -1.7032196 4.5636829 -0.6887294 9.3025238 10.7827286 2.8204649 10.1122826 10.6373058 10.2698790 5.8437929 9.8724385 14.6107389 6.1977652 2.9973466 2.9973466 10.1142827 1.1042696 4.0782597 -1.7032196 4.5823031 13.457745 7.530519 8.048443 13.247227 12.347870 12.100627 1.756340 9.390977 9.325496 10.552518 13.821716 11.793628 9.409339 4.618826 1.104270 7.885614 10.934203 9.837996 11.143369 7.920781 14.382766 8.428756 10.739584 8.769590 9.045092 10.451863 5.011147 2.881860 11.214831 10.378383 NA 11.358439 6.710527 7.753418 11.251823 10.292313 11.097597 9.329634 8.557819 9.013719 5.843793 10.593793 8.475564 11.397890 9.708940 12.177439 10.421021 10.304627 10.753254 10.101030 9.581723 9.636888 7.605944 12.339072 7.413243 10.844035 7.549564 11.145718 7.212778 7.501470 14.124639 11.032667 12.593600 12.694373 8.785744 -1.703220 -1.703220 10.078259 10.794003 9.334446 TCGA-E2-A1LH 59 0 NA 3247 breast stage i t1c n0 m0 female 2002 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 NA NA 5 5 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.676051e-06 9.363527e-07 8.88888888888889 34.0740740740741 5.18518518518519 25.9259259259259 25.9259259259259 10.1419125 8.5539905 9.8705765 6.9023365 8.7632037 9.4351768 9.1300384 10.4701337 13.1223174 13.1706941 10.5753098 9.8344470 1.9481523 12.2774886 2.4335738 11.0007088 7.6923016 8.6678719 9.9139250 5.7554965 NA 7.9116149 4.8356664 10.3845857 10.5687271 6.3541330 1.2111991 10.5420920 10.0743289 2.7961409 8.4206285 6.3127124 NA 7.2261251 6.9481406 10.4803018 8.9093009 9.4511713 8.4075724 9.6692399 2.6262055 6.4841929 15.3035469 7.2453321 10.2464324 10.0794832 9.6374398 4.2700654 -0.3737011 8.2736711 9.6746995 1.2111991 10.3558334 5.4335671 7.2186698 4.6706081 9.5195142 11.3344344 10.2500941 12.4804966 13.0443287 7.3676795 10.9196843 9.7683197 10.4724866 10.4383900 3.2111680 11.1658561 8.5833145 2.6262055 10.2646486 9.2149272 3.6262172 5.1180648 11.3511527 9.5934389 9.8048775 9.6077799 0.6262055 5.6262113 11.9113258 11.1764784 9.1260586 9.5789538 0.6912900 0.4585400 -0.0275350 -0.1163900 -0.1524700 0.2769600 0.0073609 1.8240000 -0.4271300 -0.1560500 0.9946800 0.6642000 -0.1485800 -0.1212100 0.3386900 0.0178240 0.3246300 -0.1557400 0.6419400 0.3739700 0.4064400 0.0000000 0.0000000 0.0000000 -0.0839970 -0.0839970 -0.0839970 0.4307500 -0.0125760 -0.1221300 -0.1626800 -0.1458000 -0.4338700 -0.4304500 -0.1531100 -0.1531100 0.0073609 0.2939000 -0.2063500 -0.0610890 0.1795000 -0.0754780 -0.1582200 -0.1582200 0.1544200 -0.1491300 -0.1485800 -0.1473400 -0.1987500 0.3386900 0.0178240 0.1888900 0.3246300 -0.1557400 -0.1557400 0.0013868 -0.1554100 -0.1554100 -0.1270700 -0.1954400 -0.1504200 0.0000000 -0.1724600 -0.0839970 -0.0839970 -0.4546900 0.4669000 0.0761350 0.4285600 0.516 -0.149 -0.121 0.000 -0.155 -0.155 0.623 -0.155 0.406 0.000 0.000 0.000 0.000 0.115 0.115 0.000 0.000 0.000 0.691 0.265 0.431 0.000 0.000 0.000 0.000 0.000 0.122 -0.152 -0.152 0.277 0.277 0.174 0.174 0.000 0.000 0.000 0.734 -0.158 -0.158 -0.170 -0.069 0.516 -0.149 -0.121 0.000 -0.155 -0.155 0.623 -0.155 0.406 0.000 0.000 0.000 0.000 0.115 0.115 0.000 0.000 0.000 0.691 0.265 0.431 0.000 0.000 0.000 0.000 0.000 0.122 -0.152 -0.152 0.277 0.277 0.174 0.174 0.000 0.000 0.000 0.734 -0.158 -0.158 -0.170 -0.069 9.2736711 NA 5.6923016 11.5749448 11.5293413 6.6453587 10.7606390 9.1546080 9.4678399 -0.3737011 13.6100969 12.6449344 3.0856456 1.2111991 3.8741379 7.9208334 5.0524768 12.0246891 11.8991339 10.7593549 8.6896077 1.6262055 7.9968999 10.7797647 8.5027296 7.2111748 1.9481523 NA 10.6451083 4.2700654 5.6262113 8.0978878 8.7759598 9.9079803 10.3039322 3.0856456 8.7477462 0.6262055 6.3943975 12.5417186 8.4810809 8.9458848 NA 3.3266524 8.9793595 0.6262055 3.9481429 NA 8.1846334 4.2729488 4.6262113 11.0190666 8.0691560 10.6034925 10.4795221 9.6869086 7.1100280 10.5361057 13.4560344 9.4351768 5.9660636 5.1180648 9.7308113 1.9481523 10.4834161 -0.3737011 7.2915483 12.456217 5.670608 8.597756 12.277489 9.708362 10.603493 5.755497 11.578954 8.295098 10.054573 13.047752 9.539102 8.273671 8.251922 1.626205 7.845381 11.104477 10.176959 11.893877 3.626217 13.753804 8.773417 7.781030 8.401000 7.916231 9.455650 8.326652 6.692302 10.575310 7.196068 NA 9.751626 9.589109 8.649274 10.887132 10.724245 10.081540 7.394397 9.882421 5.966064 9.266457 11.411694 8.909301 10.418189 10.631135 11.141912 10.756783 10.008837 10.215864 7.407572 NA 9.430602 7.920833 9.674700 9.957129 10.355833 5.149776 11.208355 9.519514 7.234578 13.976185 10.847800 10.916231 12.123066 11.294654 7.240922 1.948152 9.488850 8.850214 8.913925 TCGA-E2-A1LI 57 0 NA 3121 breast stage iib t2 n1 m0 female 2003 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 6.935946e-08 9.09090909090909 27.2727272727273 27.2727272727273 27.2727272727273 9.09090909090909 10.349489 9.026064 11.476777 8.759200 8.622897 8.675796 8.729890 10.978301 12.266665 13.037298 11.124103 10.835675 4.455169 12.431665 2.788915 10.747648 4.569126 8.727847 9.977872 5.796725 NA 9.125656 7.141862 9.730350 11.300487 7.796726 1.435255 9.264640 10.813926 0.587269 8.358102 6.415091 0.587269 5.072698 8.657662 10.623721 9.543213 9.479664 9.965351 11.011649 3.309744 7.885565 15.092911 8.868887 10.584732 10.978946 10.172986 3.819934 -1.734563 9.594019 10.129144 -1.734563 10.072297 4.309736 6.596261 6.691610 8.389466 12.162150 9.834251 10.324351 12.926733 7.911003 11.356945 10.741106 11.766933 11.411118 3.513276 12.277445 7.900156 5.046705 10.065031 10.897204 4.172720 4.242625 12.136672 11.349655 10.211154 10.781044 -1.734563 5.276571 12.341492 12.265609 10.032288 9.576525 1.3219000 0.7638900 0.0721090 0.1266800 -0.1930800 0.1563600 0.8566000 0.0803120 -0.3820100 1.2389000 0.8643300 1.2423000 0.6629000 -0.3245100 0.0079841 0.0079841 0.1188800 -0.2539400 0.5425400 -0.2712600 1.0126000 -0.1242100 -0.0631660 -0.0631660 -0.0131270 -0.0131270 -0.0603450 0.2129900 0.1557700 0.1557700 -0.1017100 0.1266800 0.1644500 -0.2115600 -0.3065100 -0.2976800 0.8566000 0.0803120 -0.4815500 0.3370700 0.0010636 -0.3766200 0.2044200 0.1977100 -0.2534600 -0.2534600 -0.1869700 -0.1869700 -0.3245100 0.0079841 0.0079841 0.0079841 0.1188800 -0.2539400 -0.2539400 0.0353830 -0.2712600 -0.2712600 -0.4855900 -0.0120240 -0.1242100 -0.0631660 -0.1141700 -0.0131270 -0.0131270 0.2154500 -0.0866510 0.0752710 -0.2420400 1.722 1.174 -0.325 0.000 -0.099 -0.218 0.000 -0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.764 0.171 0.171 0.000 0.000 0.000 0.000 0.127 0.127 -0.193 -0.193 -0.307 -0.307 0.776 0.000 0.316 0.000 -0.382 1.239 -0.253 -0.253 0.000 0.000 1.722 1.174 -0.325 0.000 -0.099 -0.218 0.000 -0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.764 0.171 0.171 0.000 0.000 0.000 0.000 0.127 0.127 -0.193 -0.193 -0.307 -0.307 0.776 0.000 0.316 0.000 -0.382 1.239 -0.253 -0.253 0.000 0.000 7.4674686 NA 6.1170945 10.3179126 11.0879154 7.4514337 10.5665549 9.8073994 7.4513100 NA 12.7806132 10.8810248 3.8800586 NA 3.8800586 9.2304074 3.1722315 10.0131180 13.8690868 11.5338866 9.9996308 NA 9.0219008 10.1194337 6.7329502 1.5872690 -0.1497606 0.2653169 10.9836634 5.2426254 6.7691701 7.5940192 8.1124020 9.8337187 11.3615656 2.2653469 8.9614427 NA 7.7041367 13.0262724 8.0548783 7.1601619 -1.7345631 0.5872690 8.6736744 4.4352685 2.5132633 -0.1497606 5.9795910 3.2653469 6.3421600 11.2838925 6.3042628 10.3946275 11.9309026 10.3226594 4.6228952 8.9666511 12.9547420 8.0351823 6.0467050 4.0202355 10.1628119 1.2653169 6.0918923 1.5872690 9.1248794 8.871083 8.896522 8.270969 12.431665 10.819694 11.527880 5.796725 12.234191 8.540305 10.765938 13.745945 11.363048 9.594019 8.311104 3.072706 8.622897 11.609224 10.242625 11.181037 8.413821 14.645499 9.699973 6.117094 8.763196 9.369288 10.238708 5.691610 6.712428 11.124103 10.563980 NA 10.369943 9.032701 9.463213 12.124394 10.208958 10.651746 8.123326 7.794775 7.437772 7.689511 11.456495 9.543213 9.998784 10.096652 11.351315 10.764692 11.936001 10.693181 9.050797 NA 9.823531 8.718235 10.129144 8.216629 10.072297 6.196082 10.662217 8.389466 7.921770 14.750262 10.502256 10.793066 12.672147 11.227518 4.242625 NA 11.022735 9.980878 9.081528 TCGA-E2-A1LK 84 1 266 NA breast stage iiic t4b n3a m0 female 2008 NA no infiltrating ductal carcinoma 11 black or african american not hispanic or latino NA NA 5 4 1 1 5 5 2 7 5 1 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 4.855162e-07 48.5714285714286 11.4285714285714 5.71428571428571 11.4285714285714 22.8571428571429 9.7577137 7.7069477 11.0465977 8.8642097 9.3682055 7.5531424 9.7800363 9.7819611 12.4383813 13.4577771 9.5166166 9.7557560 2.5531393 12.9215398 2.0385767 11.6926938 6.8385447 8.1619517 11.5438137 3.6906406 NA 7.6658425 8.0577627 9.6710453 11.6914143 5.9177158 -0.7688134 9.6170768 10.9238299 5.3397396 7.4791416 8.5909639 NA 1.8161901 8.7210623 9.2756084 9.8320564 8.4185665 8.8180542 10.0457968 0.8161491 7.3026764 14.4982205 8.3177486 10.6972908 11.3872974 10.9890210 3.7547806 NA 8.8532662 9.0641044 NA 7.0891952 4.8750723 5.2756068 3.9861014 8.9177149 11.3292465 9.4803277 12.0142126 11.7740044 6.2864968 10.5827058 9.9264426 10.5401221 10.5480615 4.2312173 11.2167006 11.0597476 -0.7688134 10.5793892 11.2660133 2.2401922 3.4011389 8.3345021 8.6469561 10.5531425 11.3302333 2.5531393 7.8786726 12.7135181 12.4089453 9.2878520 9.1926642 1.3683000 -0.3711200 0.0863770 0.0863770 0.0227250 0.1766400 -0.0657160 -0.0969680 3.6455000 3.6455000 3.2894000 2.0685000 -0.2289600 -0.6141200 0.5320400 0.5320400 -0.2752300 -0.2752300 -0.6223600 0.0000000 -0.2860800 0.1805600 0.1805600 0.1805600 0.0269350 0.0269350 0.0269350 0.2752100 0.0036076 0.0036076 -0.5471800 0.0863770 0.0227250 0.0620800 -0.4399400 -0.4281100 -0.0657160 -0.0969680 0.5606300 0.0284810 0.0284810 -0.5347000 -0.3851500 -0.3851500 -0.3851500 -0.3851500 -0.1791700 0.1380600 -0.5559700 0.5320400 0.5320400 0.5320400 -0.2752300 -0.2752300 -0.2752300 -0.6223600 0.0000000 0.0000000 -0.3007500 -0.2486100 0.1805600 0.1805600 -0.2230500 0.1462200 0.0269350 0.2752100 0.5521300 -0.1009200 -0.1009200 1.952 -0.179 -0.614 -0.082 -0.275 -0.275 -0.622 0.000 -0.301 -0.252 -0.252 0.181 0.181 -0.223 -0.223 0.000 0.000 0.000 0.234 0.275 0.275 0.493 -0.101 0.171 0.000 0.000 0.000 0.000 0.000 -0.251 -0.428 0.000 0.000 0.000 0.000 -0.535 2.755 -0.385 -0.385 0.000 0.000 1.952 -0.179 -0.614 -0.082 -0.275 -0.275 -0.622 0.000 -0.301 -0.252 -0.252 0.181 0.181 -0.223 -0.223 0.000 0.000 0.000 0.234 0.275 0.275 0.493 -0.101 0.171 0.000 0.000 0.000 0.000 0.000 -0.251 -0.428 0.000 0.000 0.000 0.000 -0.535 2.755 -0.385 -0.385 0.000 0.000 7.8422391 4.7547753 7.4980011 10.9985713 11.6702660 7.0865184 10.9299190 6.5877985 8.8340431 NA 12.8461542 12.3601544 3.2312173 NA 4.3186784 9.9760482 3.3186784 7.3553361 12.4360911 11.5114052 8.5258352 NA 7.7742461 10.1715280 4.1854146 2.9316452 3.4791400 NA 9.8750706 0.2311866 3.1381100 9.4284312 3.9861014 10.5796050 10.9377104 NA 9.5269833 6.0767045 5.9177158 12.3251270 8.4086337 7.6149189 NA 3.2312173 7.9454596 NA 2.9316452 NA -0.7688134 2.2330291 -0.7688134 11.0125741 2.8161696 6.4011389 10.2227362 10.1649050 1.8161901 8.9726815 12.6392787 5.3397396 3.9316547 2.4011389 9.6865417 3.2312173 5.7547753 3.6906406 8.4624356 10.796669 9.116911 9.189767 12.921540 8.866914 9.852351 3.690641 10.978148 9.278338 10.012574 13.179947 11.996500 8.853266 7.460033 4.138102 8.544097 10.986102 10.6559055 11.7122570 5.9177158 14.3581188 8.5643698 9.6437842 8.9142090 8.4791420 9.4822469 3.4011389 5.6406065 9.5166166 10.3338462 -0.7688134 10.2694475 8.6720834 8.3266376 13.1188158 9.1214786 10.7567352 8.9149636 8.9036397 7.0191170 3.0385767 11.6164620 9.8320564 10.0117542 11.1575103 11.2803823 10.4327257 7.2864968 10.1810410 9.2269815 6.4308874 10.1153544 6.5073396 9.0641044 2.8161696 7.0891952 3.4791400 11.0477981 8.9177149 6.9861014 14.1688640 10.7939338 11.1115632 14.2677314 10.6078824 -0.7688134 -0.7688134 9.9718384 9.7963164 8.7469143 TCGA-E2-A1LL 74 0 NA 1309 breast stage iiia t3 n2a mx female 2008 NA yes infiltrating ductal carcinoma 5 black or african american not hispanic or latino NA NA 1 4 5 1 5 5 4 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.733986e-07 9.09090909090909 18.1818181818182 0 40.9090909090909 31.8181818181818 8.8528662 9.0584783 12.0034986 9.4360308 7.8072364 10.2197218 9.3672597 10.6742688 11.7180774 13.3567661 9.2064249 10.6594508 NA 11.3351453 3.3735369 10.4014409 5.9178566 8.6712155 10.1089969 10.2930604 NA 10.5732072 3.9584994 9.8694521 11.1086208 2.3735369 1.2036397 7.5119487 11.5261014 2.9040409 8.1780244 10.7495396 -0.7963603 3.5959333 9.7408283 10.4878556 9.4913222 9.5578592 8.6256745 10.6209350 2.7885813 7.6671343 15.9859683 7.0121239 10.5970003 10.6563660 8.4727367 2.9040409 1.5255177 9.2656561 10.8892347 -0.7963603 11.7425263 2.3735369 5.1578077 2.5255427 10.3418817 12.0635329 9.5764749 11.7591577 12.5855584 6.4515375 10.5970003 10.0724325 11.1581697 10.9276974 4.7271744 11.6967148 8.7829258 NA 11.2259777 8.7543567 1.7885604 5.9178566 8.9551541 9.8044520 9.7753625 8.3660013 0.2036397 6.7193094 14.2399982 12.8289763 9.3042721 9.8007314 0.0686650 0.0400440 -0.2952000 0.3164300 0.0589370 0.3663700 0.2356600 -0.2857500 -0.2829900 -0.2829900 -0.2723600 0.0000000 0.0091705 -0.0140900 -0.3323700 -0.3163900 0.7568100 0.0723960 -0.2902300 -0.2754700 0.3096800 -0.3206500 -0.3180900 -0.3161100 -0.0221950 -0.0221950 -0.3331800 0.2576200 -0.0540160 0.0475520 0.0291840 -0.2986300 -0.0273980 0.0479780 0.2579700 -0.6957700 0.2356600 -0.6780200 -0.3092100 0.3044100 0.0649400 -0.6903300 -0.2959100 -0.9618600 0.2788400 0.4412200 0.0091705 -0.0494150 -0.6792100 -0.0140900 -0.2721200 -0.2985100 -0.2714000 -0.3113200 0.2730000 -0.2907100 0.3169100 0.3683800 0.1626500 -0.1554100 -0.3332900 -0.3180900 -0.2985100 -0.2228100 -0.3331800 0.0289030 -0.3007500 0.0442900 0.0442900 0.000 0.000 -0.332 -0.332 0.265 0.265 -0.291 0.368 0.239 0.139 0.139 -0.325 -0.325 -0.300 -0.300 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 0.000 0.000 0.000 0.000 0.367 0.000 0.000 -0.030 -0.288 -0.311 -0.311 0.233 0.000 -0.302 -0.302 0.176 0.176 0.000 0.000 0.000 0.000 -0.332 -0.332 0.265 0.265 -0.291 0.368 0.239 0.139 0.139 -0.325 -0.325 -0.300 -0.300 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 0.000 0.000 0.000 0.000 0.367 0.000 0.000 -0.030 -0.288 -0.311 -0.311 0.233 0.000 -0.302 -0.302 0.176 0.176 0.000 0.000 9.0584783 NA 4.3735369 10.3341804 11.1295351 6.1505739 10.0475309 8.9040150 7.6176188 NA 12.4784248 11.4233623 2.7885813 NA 3.0109588 7.9750993 2.9040409 10.6204074 11.6501763 9.7772571 9.2301333 2.2036084 9.2884183 9.9890624 5.3328941 11.3428415 9.4527233 0.2036397 10.1112518 2.3735369 4.5959273 8.7696640 6.6465530 9.6130008 9.7715661 0.2036397 9.4598187 2.5255427 8.6874257 12.7385207 5.9584970 8.4633531 NA 0.2036397 9.0443878 1.5255177 4.0615948 NA 2.6630485 2.6630485 0.2036397 11.0881620 NA 11.0588677 10.0285686 11.2085326 9.3584279 11.1157508 11.8949172 7.8546615 NA 2.7885813 9.7791492 1.2036397 NA 2.5255427 5.2036084 12.713509 7.777257 8.895354 11.335145 9.505106 10.495932 10.293060 12.683516 9.010965 11.443507 13.389879 12.277082 9.265656 8.086253 NA 7.403282 10.627776 11.245611 12.632755 5.470397 14.807756 9.363481 8.425197 9.916996 8.925222 10.168947 4.248003 5.613001 9.206425 2.788581 6.629875 11.286092 8.484381 9.540864 13.751529 8.881330 10.594854 8.751623 9.479734 8.928124 4.561161 9.227032 9.491322 10.841593 9.895353 10.167951 11.676047 11.844984 10.723246 9.075515 8.237033 8.821353 7.975099 10.889235 4.595927 11.742526 3.291073 11.024985 10.341882 7.322551 14.256433 9.995587 9.884848 11.905783 10.779149 1.788560 3.010959 9.933231 10.213439 10.021393 TCGA-E2-A1LS 46 0 NA 1604 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white NA NA NA NA 4 1 1 5 5 5 7 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.595268e-06 4.855162e-07 11.4754098360656 19.672131147541 6.55737704918033 19.672131147541 42.6229508196721 10.273489897 9.194968812 11.061125839 8.332360195 8.339065213 9.676518305 9.870265916 11.009171559 10.038990437 13.108496981 10.777053735 10.614311944 4.586404475 10.587814075 2.460873593 8.421403414 7.171367976 10.996857238 11.523043836 8.289155737 NA 10.425084638 6.358995736 8.843793888 11.150555425 7.582644061 0.001441974 6.220612429 10.450075986 1.323370069 7.012670347 7.309782823 NA 3.645298164 9.072905676 9.469048949 9.258831230 10.091555848 10.264712582 11.684438004 -0.998558026 5.659656311 14.089113429 8.798991434 7.166349905 10.410834394 9.080928090 3.393759397 NA 8.874887623 12.489785707 NA 10.235063087 1.808796896 8.284531715 2.808796896 10.206625765 12.375803705 9.724250870 13.054690541 13.066691242 7.893226891 12.102762572 11.677883191 10.848109065 10.838282752 3.785948049 12.052652341 9.518128301 3.808796896 9.480213008 9.678281989 4.249369488 2.586404475 10.819626116 10.020338984 9.241041934 9.296064100 0.001441974 9.230262106 12.541329219 12.210744451 10.421403625 10.266472322 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.965784 2.460874 5.659656 9.695801 11.319986 4.644722 10.780342 8.335985 8.306776 -0.998558 10.705347 12.637162 2.460874 NA 4.673867 8.515171 3.171367 7.955639 14.830819 11.474642 10.100134 NA 8.341293 9.638068 6.436072 3.955638 NA 1.808797 11.874888 3.460874 6.616153 7.896261 9.143551 8.325624 11.050271 2.323370 7.083592 3.808797 8.900800 13.734088 8.578872 7.140994 -0.998558 2.001442 9.274073 4.955638 3.859423 2.460874 3.001442 2.701882 3.088905 10.825209 4.427707 10.406053 11.536962 10.842221 3.088905 8.911337 10.575091 7.146101 3.001442 2.171367 11.419823 1.808797 5.001442 3.955638 4.834332 11.853505 6.525005 9.480213 10.587814 10.650700 11.974603 8.289156 11.148012 11.160943 11.108987 13.617418 11.661439 8.874888 8.990128 NA 6.715689 11.691005 10.703616 11.115836 5.859425 18.905518 8.756331 8.440235 8.942491 6.827992 9.621031 3.586404 4.210895 10.777054 7.220611 NA 9.677400 9.654288 7.751547 12.917603 10.440235 10.746277 7.125564 7.456771 8.617992 3.586404 12.049833 9.258831 10.500791 8.595768 12.298073 9.379738 10.055369 10.658762 7.834333 NA 8.307779 8.458927 12.489786 4.525004 10.235063 4.645298 11.567022 10.206626 7.099475 14.476734 10.809603 10.539147 11.875272 9.508247 1.323370 -0.998558 10.060112 9.343518 9.778699 TCGA-E2-A2P5 78 1 821 NA breast stage iiic t2 n3 m0 female 2011 NA yes infiltrating lobular carcinoma 21 black or african american not hispanic or latino NA NA 2 2 2 2 4 2 4 2 6 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.046104e-06 7.282743e-07 23.4567901234568 34.5679012345679 3.7037037037037 28.3950617283951 9.87654320987654 9.4597541 9.4118145 11.3284734 7.2810565 8.1401058 8.8602691 10.1734128 9.8014714 11.2565318 8.7526446 10.3330474 10.5793789 0.8921967 12.0780448 1.8921967 8.9689939 6.8876630 8.8014714 9.0651056 13.5228094 -0.4297314 14.1646914 3.0938137 9.5571374 11.6290875 7.8134240 2.9625675 9.4102412 11.2663483 2.4771333 9.8235067 5.8740297 -1.4297314 4.2141093 8.9838780 10.1006564 9.3880332 10.2685207 9.4771408 10.2208531 13.6419220 10.8556524 14.9535663 6.9710020 10.6437223 10.5142301 10.2943376 5.2706896 2.9625675 8.1589646 10.4894859 -0.4297314 11.0871813 6.3049600 4.5926185 4.2706934 9.6125936 12.0936896 10.9620308 10.6504014 11.6616855 7.1016312 11.0616022 10.2195063 10.2400210 10.4650679 3.7797010 11.4690405 11.7187267 -0.4297314 10.4007654 9.2896390 3.2561955 4.1849626 11.5403561 9.3614131 9.4688515 9.7894187 3.4771463 9.1064972 13.1185302 11.7597659 10.4352101 9.8411295 0.5620500 0.9407800 -0.0031859 -0.0085766 -0.0127130 0.5350300 0.4935500 0.4496900 0.8071400 0.8071400 3.6569000 0.4763200 0.5082800 0.0022193 0.0536920 0.0536920 0.4894000 0.4894000 -0.4973600 0.4705500 -0.4736100 -0.4214500 -0.4214500 -0.4561800 0.0989970 0.0380540 0.0690950 -0.4376700 -0.4509000 -0.4509000 -0.3904000 -0.0031859 -0.0127130 -0.0325870 0.0068044 0.0272160 0.4935500 0.4496900 1.0063000 0.0454240 -0.0139530 -0.4929000 0.5434700 0.5434700 0.4247300 0.4770100 0.5082800 0.5082800 0.0022193 0.0536920 -0.4520100 -0.4671700 0.4894000 -0.4934000 -0.4596100 -0.4973600 0.4705500 0.4705500 -0.4524400 -0.4439400 -0.4214500 -0.4214500 0.4670700 0.1435500 1.0591000 -0.4376700 0.4102800 -0.4045100 -0.4107400 0.476 0.476 0.000 0.000 0.030 -0.460 -0.497 0.471 -0.452 0.655 -0.444 -0.421 -0.421 0.467 0.467 0.000 0.000 -0.451 0.990 -0.438 -0.438 0.410 -0.405 -0.452 -0.452 0.000 0.000 0.000 0.000 0.519 0.000 0.494 0.494 0.000 0.000 0.934 1.415 0.477 0.477 0.000 0.000 0.476 0.476 0.000 0.000 0.030 -0.460 -0.497 0.471 -0.452 0.655 -0.444 -0.421 -0.421 0.467 0.467 0.000 0.000 -0.451 0.990 -0.438 -0.438 0.410 -0.405 -0.452 -0.452 0.000 0.000 0.000 0.000 0.519 0.000 0.494 0.494 0.000 0.000 0.934 1.415 0.477 0.477 0.000 0.000 8.5156939 8.2177086 7.0459835 11.7184089 11.4559465 7.9582029 12.2166964 9.0328139 9.2161878 0.5702686 11.5191648 11.2480556 0.5702686 1.3776235 3.0938137 7.3967983 3.2141093 10.6302705 11.6422152 10.4047211 9.8619964 5.5926185 8.3466830 10.4786427 6.4219991 2.3775958 NA NA 10.5076240 6.9881029 7.8717463 7.8671663 5.9539543 10.5960230 10.0641056 2.2706784 10.2960424 -0.4297314 6.4282312 12.1044314 7.4126003 8.6682823 0.1552311 NA 8.3417394 -1.4297314 4.9796413 3.9625675 4.8181757 6.3321995 2.8181757 11.7774170 -1.4297314 7.4861295 10.7809215 10.0854572 5.3904304 9.7078818 11.5635424 7.1738770 1.8921967 3.7401720 10.4039309 1.8921967 NA 0.8921967 2.9625675 12.583602 5.910099 8.401558 12.078045 9.325138 11.467150 13.522809 10.547530 8.757602 10.330138 12.794176 12.480612 8.158965 9.386434 2.270678 6.683993 10.602640 11.687731 13.184040 5.883132 13.010665 8.286212 5.799069 9.496546 8.242675 11.676095 6.351611 9.289639 10.333047 7.037856 1.155231 10.861996 6.390429 7.752868 9.575173 10.425119 10.760383 8.889922 9.505415 10.197784 3.570244 11.233895 9.388033 11.168303 10.537476 10.876312 10.310031 7.844046 10.793347 7.573065 10.966587 8.930022 6.568897 10.489486 3.892177 11.087181 6.155213 11.194589 9.612594 6.855652 13.901552 10.131061 10.068102 11.942707 11.750936 1.892197 1.155231 9.224886 9.975923 8.979641 TCGA-E2-A2P6 77 0 NA 1051 breast stage iib t2 n1 m0 female 2011 NA no infiltrating lobular carcinoma 1 NA hispanic or latino NA NA 3 2 NA NA 4 4 1 8 6 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.982457e-06 1.491228e-06 15.3846153846154 66.1538461538461 1.53846153846154 10.7692307692308 6.15384615384615 9.8405518 9.0171330 10.6534832 7.6456231 8.4223894 9.3437325 10.4370362 9.3729721 10.9672987 9.7348649 7.6581786 9.9302487 2.7336797 13.3622205 3.0707156 8.7803721 6.3866178 8.6033945 9.4216531 13.0865355 0.8076846 14.1950238 6.5356004 10.0784374 10.8292148 6.0171336 1.0707328 9.2473026 7.7548782 2.8076846 6.9695673 5.7986338 NA 4.1861915 9.5136575 10.0758706 10.5143483 11.4419461 8.9057116 10.7708646 2.7336797 10.6758848 14.3610209 7.2831208 10.2179189 9.9078162 10.3649518 5.2272174 7.4253309 8.0014515 11.9524652 3.3926471 11.1654515 4.0707156 5.4399489 4.6354990 10.1550794 11.9068959 10.5910053 11.5198626 12.9885211 8.7000707 10.0893778 9.8699955 11.4414014 10.0326460 3.7336797 11.5408644 5.6952060 0.4857359 10.1439630 8.5718876 3.8506694 4.7711514 9.7659423 9.8667536 10.0907680 9.8640464 1.9451957 10.3472262 12.5860031 10.8509803 9.6976397 10.1345584 1.44330000 1.45600000 0.00083195 0.00083195 0.00000000 -0.00750260 0.00000000 -0.01106000 -0.02005300 -0.02005300 -0.03885000 0.00180300 0.00124810 0.00944910 2.60340000 1.81400000 0.00235810 0.00235810 0.00944910 -0.00110870 0.01656500 -0.01271300 -0.01271300 -0.01271300 -0.00456950 -0.00456950 -0.01064600 0.01558700 -0.87813000 0.00346870 -0.02030900 0.00083195 0.00000000 0.00000000 -0.00750260 -0.00750260 0.00000000 -0.01050800 0.01908300 -0.00968060 -0.00968060 0.03792400 0.01852300 0.01852300 0.01852300 0.01852300 0.00124810 0.00124810 0.00944910 -0.87143000 -0.85385000 -0.87060000 0.00235810 0.00235810 0.00235810 0.00388540 -0.00110870 -0.00110870 0.01656500 -0.86876000 -0.85019000 -0.01271300 -0.67039000 0.01544700 -0.00456950 0.01558700 0.02160300 0.03157700 0.03157700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.016 -0.843 -0.837 0.000 -0.670 -0.670 0.000 0.000 0.000 1.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.016 -0.843 -0.837 0.000 -0.670 -0.670 0.000 0.000 0.000 1.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9359317 0.4857359 5.0249092 11.4691014 11.1608264 8.3913794 12.1911679 8.8813177 9.6086248 0.4857359 12.3310455 11.1910296 4.9451816 0.0706641 3.7336797 6.9451828 4.3437347 10.3441211 11.3433437 11.6131010 9.4594488 7.7548782 8.3043335 10.5725511 6.1223766 6.2736539 2.3926471 NA 10.4363074 6.5837838 5.3312430 7.2339446 8.2963230 11.2222697 10.3699219 4.9120175 9.6506585 NA 7.8993793 12.2754889 10.0546576 8.3406197 -1.5141610 -1.5141610 8.2473028 2.9451769 5.4969800 1.0707328 4.0093113 3.7726352 3.0707156 10.1814148 -1.5141610 6.7145697 10.4551380 9.4179662 5.2272174 10.0627081 11.1581768 8.0307157 4.0403401 3.1861836 11.1388204 1.9451957 NA 5.5081180 0.8076846 14.5551058 5.5410346 8.6878753 13.3622205 10.5735027 10.8812856 13.0865355 12.9763517 10.2433456 9.8802141 12.8987843 8.7757703 8.0014515 8.5639021 0.0706641 7.4885664 10.9469751 11.1526412 12.8426161 5.3186422 13.7824498 8.7384169 4.6755788 9.1205624 8.6494010 10.0654210 7.5136573 5.9203791 7.6581786 8.3296726 0.4857359 10.8496125 4.6755788 7.6573034 8.9451831 10.6771192 10.8844951 6.6201773 9.5403557 9.9307663 5.1581754 11.1427773 10.5143483 10.7437285 9.6066373 10.8710746 9.5798292 9.8791420 10.6024203 6.8121812 NA 8.5352598 7.2791592 11.9524652 5.3312430 11.1654515 5.5301457 11.3458685 10.1550794 7.5864135 13.5937527 9.6443612 9.9705743 11.9093927 10.6872628 1.0707328 -0.5141610 10.0432152 9.4120475 10.2712040 TCGA-E2-A3DX 43 0 NA 1325 breast stage iiic t2 n3 m0 female 2011 NA yes infiltrating lobular carcinoma 25 white not hispanic or latino NA NA 3 3 4 1 4 4 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 1.040392e-07 10 30 10 40 10 10.9409088 10.0288287 11.8531737 10.3868129 8.2802966 9.3372236 10.9481898 9.6308230 11.1741256 10.8290767 10.5830404 10.5410959 3.4474073 14.6289973 3.4043446 10.4304001 7.7108829 8.6591518 8.0464441 12.3888857 3.7862095 12.0559331 6.6728270 9.8475125 9.6716920 5.9598559 0.3599709 9.8162981 8.7565483 3.4474073 9.1761273 8.0376634 -1.6402540 6.4420926 9.9312222 10.9686605 9.9538016 11.9192013 9.7003502 11.5365843 9.6493862 10.9197987 15.4081006 8.6296550 9.8917881 11.7489027 11.2735811 5.6078718 3.1672937 9.5791122 12.1192077 -1.6402540 11.4174278 7.2085670 7.5248504 4.6818709 10.3557108 11.6650079 10.0136845 13.7486673 12.8497289 7.9561333 10.8155278 10.5636037 11.1365823 11.5704628 5.5596172 11.9080431 10.6928194 0.6818540 10.4169201 8.9126127 3.5895358 8.0394236 10.2077840 9.9174074 10.6874963 9.7867326 3.8835035 9.3104996 12.9189024 13.2880456 9.9943010 9.7597556 0.27553000 0.27553000 0.00000000 -0.00452110 -0.00434820 0.00055459 -0.00055444 -0.00055444 0.01335300 0.01335300 0.01335300 0.00088008 0.00088008 -0.00290910 -0.00290910 -0.00290910 0.00055459 0.00055459 0.00069327 -0.00180140 0.00277450 0.03073200 0.03073200 0.03073200 0.00152550 0.00152550 0.00152550 -0.00041585 0.00235810 -0.00716730 -0.00231370 0.00000000 -0.00434820 0.00249690 -0.00288910 -0.00207840 -0.00055444 -0.00055444 -0.00055444 0.00000000 0.00000000 0.01335300 0.00291330 0.00291330 0.00291330 0.00291330 0.00088008 0.00346870 -0.00290910 -0.00290910 -0.00290910 -0.00290910 0.00055459 0.00055459 0.00055459 0.00069327 -0.00180140 -0.00180140 0.00277450 -0.29532000 0.03073200 0.03073200 0.00374650 0.00152550 0.00152550 -0.00041585 0.00541390 -0.01381500 -0.01381500 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.295 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.273 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.295 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.273 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.56939691 2.26684650 5.98199646 10.37117091 11.03170589 7.05252458 11.74836466 10.56623465 8.83112100 5.29068243 11.90152432 11.18726453 4.29068243 -0.05514155 4.92980046 7.96727411 3.85179900 11.00447597 11.62658383 10.75975564 8.70977793 4.31413819 7.30245798 10.62585164 9.13966313 7.10477800 2.68187650 NA 11.38248488 7.33435821 9.15435966 8.35994366 6.92979928 10.87079192 10.11274248 6.06038250 8.85779536 NA 9.14947735 12.95105691 8.78935040 8.12647269 -0.05514155 4.68187088 8.42603281 4.24258726 5.53985362 -0.64002911 6.95613334 5.72100893 4.66372602 9.89667661 NA 9.39405491 10.25703278 9.70922497 7.43408524 10.74715323 12.36828475 9.52170545 3.88350352 5.14130199 11.91704833 0.94493339 -1.64025395 0.35997089 0.35997089 11.5690726 4.6637260 8.3372236 14.6289973 10.1757272 10.0707501 12.3888857 12.4981355 8.9106712 10.8462759 13.3716514 11.6704145 9.5791122 8.2225810 -0.6400291 6.7042398 11.1231560 11.671692 12.160035 6.348629 13.475021 8.611414 8.315593 8.838713 8.139663 10.260010 8.804959 7.612609 10.583040 7.376752 3.447407 11.268899 6.659151 6.762060 12.544199 11.071826 10.487938 8.313674 8.211693 13.622075 8.060384 11.436798 9.953802 10.321755 9.621451 11.629216 10.144987 10.339726 10.484065 9.417259 NA 9.965479 8.862686 12.119208 9.799255 11.417428 8.435423 11.547630 10.355711 7.897162 14.046690 9.868234 10.275823 13.084884 10.978788 6.863770 3.003800 10.207784 10.534869 9.883506 TCGA-E2-A56Z 69 0 NA 252 breast stage iib t2 n1a m0 female 2012 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 1 1 2 2 1 1 3 8 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.144431e-06 2.080784e-07 25.6410256410256 10.2564102564103 0 30.7692307692308 33.3333333333333 9.9915705 9.4196468 11.0534766 5.9168301 9.4148901 8.3644683 9.4300565 10.5909430 9.7009274 13.8044369 12.7409099 10.6439375 -0.1492806 12.6070885 3.2430597 9.6288177 6.4281692 8.2998894 8.1151831 12.9663533 3.0206622 14.2443657 1.1726795 9.8089309 10.2680658 7.6386430 -0.1492806 8.6238797 11.1766082 NA 7.1950365 5.9592648 NA 3.1726635 8.9979455 10.1777318 9.4024489 9.3070951 9.5795115 11.0390204 5.0405637 10.7531158 13.7012693 8.0882376 11.2317428 9.5416116 10.4990982 3.4945948 6.5922073 7.3624936 9.3791947 -0.1492806 10.0137612 6.9275564 4.1726715 3.4945948 9.6337389 12.3572962 10.9631801 10.3475945 12.2357941 8.6072970 10.8150815 11.0241055 10.5187392 10.1579415 4.0206622 11.5932606 11.2762188 2.5511715 10.0771529 8.6820479 2.3101656 1.8507594 10.4723346 9.2998894 10.6942692 9.5786610 4.6056306 8.4963992 10.7895851 10.0004878 9.5896774 9.6852117 0.6727000 0.4722100 -0.0899640 -0.0899640 0.4290600 -0.0388500 0.4491800 -0.0858550 3.6569000 0.2991500 0.2883000 -0.0231550 -0.5342300 -0.0215100 3.3983000 -0.5481400 0.5468300 0.4843000 0.7769500 0.5974600 0.2211400 -0.5475400 0.5051600 0.5051600 0.0056919 0.0056919 0.0056919 0.5166400 -0.0422450 -0.5431000 0.0000000 -0.0899640 0.4290600 -0.0906690 -0.0388500 0.5107200 0.4491800 -0.0941000 -0.0858550 0.3583900 0.4525800 -0.2088300 -1.1081000 -1.0757000 -0.3059200 0.4787300 -0.5342300 -0.5342300 -0.0215100 -0.0215100 -1.0920000 -1.0920000 0.4843000 0.4843000 0.4843000 -0.2216900 -0.5501100 -0.5585300 0.2211400 0.0987060 -0.5475400 0.5051600 0.3446900 0.0056919 0.0056919 0.5159600 -0.1866000 -0.5493500 -0.5493500 -0.534 -0.534 0.000 -0.527 0.484 0.484 -0.222 -0.550 0.221 0.990 0.000 -0.548 0.505 0.345 0.345 0.000 0.000 0.000 0.434 0.516 0.516 -0.187 -0.549 0.000 0.000 0.000 0.000 0.429 0.000 0.000 0.511 0.449 0.000 0.350 0.350 -0.177 0.112 3.657 3.351 0.435 0.036 -0.534 -0.534 0.000 -0.527 0.484 0.484 -0.222 -0.550 0.221 0.990 0.000 -0.548 0.505 0.345 0.345 0.000 0.000 0.000 0.434 0.516 0.516 -0.187 -0.549 0.000 0.000 0.000 0.000 0.429 0.000 0.000 0.511 0.449 0.000 0.350 0.350 -0.177 0.112 3.657 3.351 0.435 0.036 9.1994687 NA 5.7696051 10.6431243 11.2762188 7.4826813 11.2298482 7.2113685 10.0769301 NA 13.4145923 10.9140717 7.4543667 2.1726795 0.8507194 7.3743023 5.4654489 11.0121875 10.8796826 10.6860015 9.4927923 0.4357353 8.8308802 10.0614120 6.3019516 6.5017926 -0.1492806 NA 9.4672895 7.9566491 6.6321010 7.0004880 5.6709196 10.5576467 10.1175271 3.1726635 8.9877319 NA 6.4281692 11.5202901 9.3405885 9.0638448 NA -0.1492806 8.9605714 -0.1492806 4.4654521 -0.1492806 4.2082909 5.2601311 1.4356819 10.8876010 0.4357353 7.0986680 10.6097966 9.9295586 4.6056306 7.9434977 12.2751694 6.6899449 2.4357086 3.8049415 11.0008052 9.0891454 -1.1491206 3.7576314 5.5511807 15.991294 6.664521 9.362493 12.607088 10.445532 10.676495 12.966353 11.558962 8.219247 10.003659 12.348967 9.976800 7.362494 8.285369 2.658097 7.297824 11.243595 10.6361931 11.6294338 7.2430578 12.9674866 9.3555597 4.6056306 8.9864499 8.6271738 10.6977236 5.1545225 9.3575441 12.7409099 7.7636300 NA 9.3545663 7.2214276 7.1761811 9.1069494 9.3985992 10.8661557 7.8507407 9.6288177 7.2170630 3.8049415 12.5077162 9.4024489 10.6609105 9.9851670 10.6419035 9.0711191 10.0150191 10.1482301 5.6451569 NA 7.8149951 6.6056277 9.3791947 4.4654521 10.0137612 5.8507394 11.0831616 9.6337389 6.7576314 13.3182188 10.6093803 9.3575441 11.8328430 10.2811932 0.4357353 NA 10.1022231 8.3624931 9.1407595 TCGA-E2-A570 47 0 NA 931 breast stage ib t1c n1mi m0 female 2011 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 3 1 NA NA 4 1 6 5 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 2.080784e-07 21.7391304347826 17.3913043478261 4.34782608695652 34.7826086956522 21.7391304347826 10.017342 9.122873 11.268284 6.734359 8.567375 9.333748 10.187184 9.666640 10.931414 12.040065 10.757283 10.082864 7.075014 12.955326 3.490057 9.935361 7.103358 8.532362 8.492196 12.665690 2.557165 14.116151 4.345659 9.963366 10.511890 6.336139 NA 11.049819 9.944007 NA 8.678934 7.780728 NA 2.905081 9.617370 9.666640 10.210173 10.626676 9.541713 10.966942 11.120448 11.780289 14.754968 7.706284 9.988758 9.797306 10.441474 5.419660 NA 7.690191 11.437583 2.097746 10.918311 6.364520 5.697646 3.621290 9.767504 12.170369 10.738882 13.242471 12.267502 8.930624 11.029210 10.392544 10.921101 9.731637 4.383137 11.740462 11.788604 NA 10.795570 8.656154 5.634564 3.185201 10.407210 9.449777 9.886452 9.138023 2.682686 10.059183 12.961920 12.333449 10.372112 9.956492 1.19140000 1.19700000 -0.00621720 -0.00124730 -0.00171560 0.00208050 -0.00636680 0.00180300 -0.00017185 -0.00017185 -0.00357720 0.00069327 0.00069327 -0.00120570 -0.00120570 -0.00120570 0.00194180 0.00194180 -0.00069303 -0.00124730 -0.00387790 -0.00415460 -0.00415460 -0.00415460 -0.01477800 -0.01477800 -0.01477800 0.60756000 0.00152550 0.00152550 0.00305220 -0.00083160 -0.00171560 0.00777830 -0.00443120 -0.00443120 -0.00636680 0.00180300 0.00680440 1.09530000 0.95582000 -0.00017185 0.00000000 0.00000000 0.00000000 -0.00456950 0.00069327 0.00069327 -0.00027724 -0.00120570 -0.00120570 0.01126100 0.00194180 0.00194180 -0.00415460 -0.00069303 -0.00124730 -0.00124730 0.00038735 -0.61968000 -0.00415460 -0.00415460 0.00463670 -0.01477800 -0.01477800 0.60756000 0.00346870 -0.01050800 -0.01050800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.617 -0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.608 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.095 1.095 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.617 -0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.608 0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.095 1.095 0.000 0.000 0.000 0.000 0.000 0.000 9.0778729 NA 6.0750127 11.2732830 10.9989775 8.0197531 11.3735669 7.0380180 9.7824821 NA 12.5964580 11.0064150 3.5571650 2.7981750 1.9050813 7.9650119 3.6212900 10.7142823 10.8273541 10.8106903 9.5653390 4.0046272 8.7648451 10.4744015 4.4900502 2.9050813 2.0977456 NA 10.4111833 4.9050861 7.0402481 7.4286499 7.4986131 11.0224643 10.4219140 4.0046272 8.8171221 -0.9023892 7.9834297 12.2737507 9.2924903 8.4398080 NA -0.9023892 9.1380232 3.0977288 3.7415856 NA 3.6826969 5.5239978 1.6827081 9.9107129 -0.9023892 6.3831357 10.3686127 9.5271401 4.2676556 9.0519297 11.4072098 6.6446278 2.7981750 3.4900566 9.8986333 2.4196737 NA 1.9050813 3.0977288 12.644903 6.016597 9.276398 12.955326 9.986477 11.443970 12.665690 11.843618 8.406072 9.503938 13.455492 9.394650 7.690191 9.772808 NA 7.277643 10.835826 11.0475601 12.7342448 5.8256534 13.2596447 9.2487499 4.1421275 8.8222474 8.3169019 9.9704545 6.1421275 7.0284708 10.7572834 8.2974056 3.3456660 10.5960841 7.9834297 5.9503564 10.8597001 10.7032129 10.4077781 8.2114756 9.8076788 7.8256540 4.0519289 12.4705305 10.2101729 10.4117501 10.0649596 10.9545480 9.4060725 10.2819889 9.7929617 7.2726587 -0.9023892 9.5190514 7.0635180 11.4375835 4.6523201 10.9183113 8.4151460 10.4292103 9.7675043 6.6134329 13.8580895 10.2308756 10.4003724 12.4587177 10.8909303 NA NA 9.8542898 9.3301543 9.3574768 TCGA-E2-A572 72 0 NA 1208 breast stage iiia t2 n2 m0 female 2011 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA NA 1 5 3 4 1 3 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.3009551401 8.1158031742 10.5337619893 3.5230224127 9.1196969922 7.4792394551 9.4382508445 8.4973109744 12.3657812935 13.0552499101 11.3470804503 9.9966385807 1.8068189644 13.2146887185 -0.0005771935 11.8210337932 7.3614025520 6.7610099541 10.4083195495 12.0885784763 NA 14.8178415477 6.2473864013 11.0415630600 9.0120836713 9.7102655799 -1.0005771935 7.8636454971 11.8230253557 -1.0005771935 7.1843348507 3.0869196067 NA 2.3213797666 8.0869217291 8.3874762809 10.0431699051 9.0190496858 6.9881438588 9.2986670208 0.5843853073 9.9294571169 13.6898936517 0.5843853073 10.4246750274 9.9717210060 9.1979042057 3.9536563622 8.6665705631 6.5768879048 9.8589939461 -1.0005771935 11.2258712614 1.5844334155 2.9994588879 2.8068189644 8.2662454286 11.4125580977 10.2923558015 11.2633150982 11.2656599908 10.0574508137 9.8003589496 10.4434386118 9.0424864793 9.0064862600 0.9994949683 10.5669399387 10.2021950995 NA 10.0601550899 7.2040301545 2.4588806663 NA 9.8315579121 8.0356327066 10.6701153584 8.1643659403 2.9063518889 9.3381955212 11.6383474851 10.9142179044 9.0802765821 9.4792394551 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6269930004 NA 8.6433154385 11.5516478517 12.4880524289 10.1356107948 11.2685857425 3.3307304806 11.1053806894 NA 12.4138800613 12.2620883838 3.6998958306 3.1693798803 1.5844334155 7.3123420701 2.5844334155 12.2284280580 9.9966385807 8.6288158724 10.4173116138 2.4588806663 7.4547862110 10.4413658259 4.7273813848 6.1492065156 NA NA 8.3614029906 5.0438519139 3.8574436155 7.8543273491 4.7273813848 11.2055577081 8.7016318765 NA 9.2330786845 0.5843853073 5.7273786617 13.0828553099 8.3281340958 8.7222665472 NA -1.0005771935 7.9033408090 3.3213941989 4.7808192574 NA 1.3214086312 5.9301956340 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-1.0005771935 NA 9.9470959903 8.3437551289 8.0438530073 TCGA-E2-A573 48 0 NA 1062 breast stage ia t1c n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 NA NA 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.144431e-06 3.467973e-07 11.3636363636364 20.4545454545455 4.54545454545455 36.3636363636364 27.2727272727273 9.48575325 7.86173210 11.24768997 7.46015115 8.55815511 9.17552585 9.07790362 11.30100832 12.25790719 11.91487855 11.27975421 10.32221694 3.42529816 11.50674682 2.07165971 11.59194663 6.10140215 8.41545785 8.10874450 5.50164296 -0.09819665 7.78131381 7.82654277 9.90428523 10.49184959 7.15911852 0.90172613 10.79199464 10.95395873 -0.09819665 8.70263019 8.23935221 -0.09819665 6.32799448 9.91015895 10.22928304 9.60390299 9.10262900 9.52011596 10.58340804 2.36115073 7.62965096 14.75496681 7.44255624 11.42627209 9.74250835 10.02261624 2.48668863 -1.09819665 8.76746379 10.96983682 0.48666289 10.12633511 7.48669266 8.25708136 6.86173210 8.49792008 11.89749752 9.85883237 10.97988115 12.44306903 8.33844180 10.79616919 10.40157629 11.08970093 9.84277790 3.42529816 11.74132785 9.51090912 -1.09819665 10.67280709 9.11847627 3.99046481 5.03101136 11.76533591 10.36423262 9.67980748 9.42038345 1.70907002 7.35705753 12.64908418 13.25273859 9.58296878 10.47632386 0.6242900 0.6015500 0.0507160 0.4477000 -0.3950500 -0.1556300 0.5212300 0.3572900 0.1318800 0.1318800 0.1318800 1.0744000 0.0909050 -0.1419000 -0.1348000 -0.1348000 0.1777300 -0.1456000 0.2756400 -0.1399700 -0.3628000 -0.1397100 -0.1397100 -0.1397100 -0.1390600 -0.1390600 -0.1390600 0.4606300 -0.0696420 0.0874300 -0.1057400 0.0507160 -0.4820500 -0.3950500 -0.4904400 -0.4810600 0.5212300 0.3572900 0.3572900 0.1209800 0.1574500 0.1474500 -0.1251500 -0.1251500 -0.1251500 -0.1251500 -0.5800600 -0.1463400 -0.0075717 -0.1348000 -0.1348000 0.4987900 0.1176000 -0.1386800 -0.1386800 0.0094878 -0.1399700 -0.1399700 -0.3628000 -0.1395800 -0.1397100 -0.1397100 -0.1379000 -0.1390600 -0.1390600 -0.1856800 0.4493000 -0.1309200 -0.1309200 1.070 0.131 -0.135 -0.135 -0.021 -0.139 0.000 -0.140 -0.363 -0.140 -0.140 -0.140 -0.140 -0.138 -0.138 -0.139 -0.139 0.000 0.000 -0.186 0.275 0.435 -0.131 0.000 0.000 0.000 0.397 -0.395 -0.395 -0.156 -0.156 0.357 0.357 0.157 0.157 0.132 0.132 -0.125 -0.125 0.111 0.000 1.070 0.131 -0.135 -0.135 -0.021 -0.139 0.000 -0.140 -0.363 -0.140 -0.140 -0.140 -0.140 -0.138 -0.138 -0.139 -0.139 0.000 0.000 -0.186 0.275 0.435 -0.131 0.000 0.000 0.000 0.397 -0.395 -0.395 -0.156 -0.156 0.357 0.357 0.157 0.157 0.132 0.132 -0.125 -0.125 0.111 0.000 8.05147760 -1.09819665 7.19635131 11.50975413 11.86805556 6.18713231 10.83652697 8.72463561 9.40228346 0.48666289 13.26038157 11.96671896 2.48668863 NA 1.22366967 8.47348294 4.57415602 10.94099213 10.83652697 10.60130281 9.41150527 -1.09819665 8.30899833 10.23544478 8.11118367 6.96242640 1.90172613 NA 10.72549561 2.48668863 7.38957025 7.53108665 10.45247714 11.32162735 10.40107801 2.48668863 9.92756199 0.90172613 7.12573168 11.69797280 9.36013708 8.56706623 0.90172613 NA 8.27023692 1.48671437 2.70909209 NA 7.73145277 3.48668863 4.25928002 11.24602626 6.98919352 8.86462632 10.89183435 10.08101747 6.64992293 11.16617294 13.85100995 9.31430023 4.83246980 5.01025619 9.69695831 -0.09819665 1.70907002 1.70907002 7.47915941 9.928524 8.614257 7.855927 11.506747 10.662866 11.378730 5.501643 8.779781 8.664943 10.459673 13.634905 10.129346 8.767464 7.130549 1.901726 8.041282 10.925485 10.884724 12.159855 5.669914 13.557306 9.552782 7.994488 8.577688 9.199793 9.689568 7.989193 7.285435 11.279754 11.302610 5.989194 10.086606 10.244361 9.098984 11.135949 10.515520 10.271328 6.873274 10.661619 5.393584 8.845710 10.558825 9.603903 10.352941 10.031657 11.532453 11.530859 11.390575 10.087845 7.456319 NA 9.723409 7.520116 10.969837 9.106301 10.126335 7.005018 10.323269 8.497920 7.501643 13.790474 10.435547 10.666187 12.614365 11.678163 5.759712 -1.098197 10.230405 9.124525 8.805612 TCGA-E2-A574 44 0 NA 1179 breast stage iia t2 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 1 1 5 5 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.788144e-06 8.381925e-07 17.1717171717172 47.4747474747475 4.04040404040404 16.1616161616162 15.1515151515152 7.5018929 8.3538548 10.0291401 5.7664149 9.4203502 8.5523652 8.8995180 10.2834963 10.4072940 12.6218299 10.2651927 9.6218299 -0.8334131 11.9708354 2.9738500 10.5647119 8.2433182 8.5609652 8.1749312 3.6900595 NA 4.5927680 7.2325917 10.1791342 9.7994979 2.4884379 3.2539590 6.9213899 11.3175192 2.4884379 7.8807480 5.7958604 NA 1.9738684 7.2054218 10.4725643 9.0260376 9.1322869 8.9130168 8.7552174 1.1665226 7.4096769 13.1909498 5.0891761 8.8790297 9.8184513 9.8459828 2.6259250 NA 8.8389281 7.9445797 NA 9.4725643 1.1665226 2.4884379 5.7514664 9.3213207 12.1997536 9.8530032 12.2914317 11.9386110 8.1523447 10.4547920 6.0368681 9.6583557 9.1046121 2.6259250 11.6213160 10.0414841 2.1664905 9.0613204 9.4001222 2.3364262 -0.8334131 11.7901556 9.9986016 10.2552909 8.9834862 0.1664584 6.5415427 12.0318493 12.7647878 8.9962255 8.6683397 0.705130 0.614260 -0.407820 1.810600 -0.433660 1.660900 0.337420 0.353810 -1.150400 1.678700 0.942410 0.697330 -0.454360 0.155320 0.248880 0.248880 0.757770 1.507900 0.694650 -0.160260 -0.273140 0.333670 0.333670 0.333670 1.062100 1.061600 -0.515270 0.701010 -0.027398 -0.024114 0.165500 -0.407820 0.386840 -0.435280 -0.465250 -0.458540 0.357730 0.470310 0.786590 0.788910 -0.058193 -0.523480 0.000000 0.000000 0.000000 -0.447820 -0.454360 -0.463110 0.155320 0.155320 0.283110 0.274110 0.781960 -0.848670 -0.169800 0.694650 -0.852500 -0.451900 -0.269510 -0.076812 0.333670 0.333670 -0.910780 0.285330 1.042000 0.738150 -0.317160 -0.461310 -0.478250 0.243 -0.454 0.274 0.274 0.000 0.000 0.695 -0.452 -0.273 -0.472 -0.472 0.334 0.334 -0.886 -0.886 -0.493 -0.493 0.000 0.705 0.738 0.738 -0.317 -0.478 0.863 0.108 -0.408 -0.408 -0.448 -0.448 1.202 -0.459 0.337 0.337 0.000 0.000 -0.681 0.937 0.000 0.000 0.000 0.000 0.243 -0.454 0.274 0.274 0.000 0.000 0.695 -0.452 -0.273 -0.472 -0.472 0.334 0.334 -0.886 -0.886 -0.493 -0.493 0.000 0.705 0.738 0.738 -0.317 -0.478 0.863 0.108 -0.408 -0.408 -0.448 -0.448 1.202 -0.459 0.337 0.337 0.000 0.000 -0.681 0.937 0.000 0.000 0.000 0.000 9.3401797 -0.8334131 5.6742968 11.3351748 11.6930019 7.9154337 9.7524041 5.5002826 9.4009488 NA 12.7054191 12.0508335 1.7514637 NA 1.7514637 9.2433182 3.3364262 9.1580244 11.8242677 9.9255586 9.7458187 1.7514637 8.7552174 10.4697126 3.7514637 6.7514651 1.1665226 3.2539590 9.5480456 NA 7.4748416 9.2815464 5.7056628 9.5262522 9.5673821 NA 9.3439221 1.7514637 7.8944231 12.8719191 9.0688777 8.1693177 NA 2.6259250 8.3977238 5.3162508 1.1665226 1.4884122 NA 3.8669376 1.7514637 11.8262756 5.1888717 9.0445537 11.1057145 9.6959333 0.1664584 9.0718897 11.0233172 10.1409173 0.7514637 2.1664905 10.5196495 1.9738684 2.6259250 1.1665226 5.8247144 11.827693 8.889310 7.941289 11.970835 9.944580 11.087228 3.690059 9.675288 9.202855 9.485045 12.149318 12.668464 8.838928 9.451905 2.866948 8.177730 9.167911 9.3187875 11.1148699 2.1664905 13.4248434 8.5085772 0.7514637 7.8669426 8.3314096 8.3855018 3.2539590 1.1665226 10.2651927 12.1721272 NA 9.4250688 8.0552461 7.7435540 10.1480699 8.9786799 9.7710559 8.3214727 11.3510681 1.9738684 1.7514637 10.3341466 9.0260376 10.4191681 10.4957384 11.8289485 11.0395622 11.0131683 9.4120553 6.8876020 NA 9.1040237 5.6900650 7.9445797 0.7514637 9.4725643 8.1999255 9.8781696 9.3213207 7.8318386 15.7363434 11.4948971 11.5085773 11.2533023 11.5069091 NA 3.8103608 9.5885674 7.7017778 8.8442224 TCGA-E2-A576 69 0 NA 1043 breast stage ia t1c n0 mx female 2011 NA yes infiltrating lobular carcinoma 0 black or african american not hispanic or latino NA NA 1 2 NA NA 1 1 3 8 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1747015 8.5747888 10.4765838 6.2319008 9.1539596 7.5920257 9.7638529 8.4668057 9.5851554 9.0825834 11.3634442 9.5547084 0.8743642 13.6465604 2.3337672 11.1872319 7.0138999 8.2794903 9.4308550 12.0694134 3.7323343 13.6695769 4.1597503 9.7697499 10.4996012 3.7323343 2.4593005 11.0555011 10.7123709 -0.1256358 10.2041452 4.2319008 NA 3.3979125 8.3601781 9.0641734 8.0316957 9.6425332 8.8701159 10.3726995 4.5182078 11.9659496 13.1988811 7.3318118 9.7630922 9.8841775 9.8146626 3.7323343 3.1222751 6.3006143 9.2230771 -0.1256358 8.8672871 5.1411344 4.3006143 3.8743445 7.8855762 12.2111344 10.7393088 10.4465754 11.5984363 9.1860972 10.2373885 10.5708992 9.7072388 9.1735570 0.8743642 10.5569046 12.0291670 NA 9.6695769 8.8729392 4.3006143 1.4593267 10.1701178 8.9471515 10.1264230 9.7961899 3.0442717 6.7991611 11.9050160 10.4513056 9.6217026 9.2308008 0.0600140 0.0415340 -0.5274100 -0.5329100 -0.0471870 0.0183190 0.0415340 0.0000000 0.7447100 1.5241000 1.5947000 -0.0076737 -0.7522300 0.0378590 0.1158700 -0.7447700 0.0968940 0.0231590 -0.7579600 0.0255220 -0.7265400 0.0957320 0.0957320 0.0957320 0.1088500 0.1088500 0.1088500 0.2718300 -0.7060800 -0.7270700 0.0118930 -0.4818800 0.0487640 -0.0489460 0.0183190 0.0034058 0.0415340 0.0000000 0.0000000 0.0225200 -0.0409500 -0.7482900 -0.0094682 -0.0094682 0.0429500 0.0367120 -0.7522300 -0.0071213 0.0378590 -0.6639700 -0.7447700 -0.7764600 0.0231590 0.0231590 0.0231590 -0.7349900 0.0605850 0.0526020 -0.7143900 -0.7167900 -0.7120700 0.0957320 0.0425250 0.1098700 0.1088500 0.2874700 0.0153830 0.1291200 -0.7020300 0.000 0.000 0.000 -0.745 0.000 0.000 -0.750 0.000 -0.714 0.000 -0.717 -0.704 -0.704 0.000 0.000 0.109 0.109 -0.706 0.000 0.272 0.272 0.000 -0.702 0.000 0.000 -0.533 -0.533 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.784 1.524 0.000 0.000 -0.148 -0.148 0.000 0.000 0.000 -0.745 0.000 0.000 -0.750 0.000 -0.714 0.000 -0.717 -0.704 -0.704 0.000 0.000 0.109 0.109 -0.706 0.000 0.272 0.272 0.000 -0.702 0.000 0.000 -0.533 -0.533 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.784 1.524 0.000 0.000 -0.148 -0.148 8.1574374 NA 5.8401334 11.5215824 11.7204269 8.9642892 11.4908977 4.9024740 10.3961015 4.3979125 12.0729474 11.6833935 7.7040717 3.7812443 3.1222751 7.4517774 3.7812443 9.9091478 10.1287870 9.2130853 10.1234624 3.8743445 8.2097394 9.8651620 6.6687645 6.4593119 NA -1.1256358 9.1481445 7.7691667 5.1031661 7.7447134 8.0617011 11.2915923 9.1735570 NA 10.4484693 NA 5.8967175 12.3503356 10.0068486 8.9214729 -1.1256358 7.5289846 7.7600453 NA 5.8516291 -1.1256358 4.1222751 7.5337743 3.1222751 11.2030238 0.8743642 6.7752152 10.9952348 9.8183288 4.2666666 9.1234624 10.8782181 7.2964134 2.5747797 3.9187392 12.5578919 2.5747797 NA -1.1256358 3.7323343 13.923073 6.421244 8.175845 13.646560 9.334805 10.516852 12.069413 10.359675 8.452137 10.037999 12.297859 11.430376 6.300614 9.950496 3.574792 7.707239 9.602269 10.4555495 12.3291623 6.3006143 13.1534494 8.3151971 4.8967175 9.5808449 8.7812394 10.3922742 5.7569912 5.9723802 11.3634442 7.1872323 2.0442892 9.7991615 5.6158165 7.2618495 6.8911567 10.3626911 9.8544885 7.4365916 11.4303759 6.2406711 5.5037049 14.1295339 8.0316957 11.4301363 9.5669645 10.5911683 9.1411354 10.1382050 10.4342039 4.9828750 -0.1256358 9.2681040 6.0935179 9.2230771 6.2052654 8.8672871 4.9828750 10.8021269 7.8855762 7.3581650 14.2417636 10.1798407 8.8372451 11.5892383 11.6744399 1.6817191 3.6817079 9.8415752 8.3500821 9.7909748 TCGA-E2-A9RU 90 0 NA 538 breast stage iiic t2 n3a mx female 2013 NA yes infiltrating ductal carcinoma 12 black or african american not hispanic or latino NA NA 4 2 1 2 5 2 2 8 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.6595707 8.0601085 10.6371559 5.2121102 9.5677432 8.0006074 9.5715818 9.6402053 11.4734373 12.3568626 11.4819609 9.9592061 NA 12.4922919 3.0157116 11.3034268 6.4194361 7.1722185 7.4531200 12.4391806 NA 13.5063147 5.1856406 9.9660274 10.0943101 7.1586723 1.0157116 8.9582291 12.5132337 -0.5691795 9.4008579 5.8401434 NA 2.2381143 9.0491374 9.4279315 7.7161541 9.5766841 8.0343781 9.6810504 7.2949377 10.2723164 14.4975559 5.4368248 8.9562728 8.8337639 9.6547536 3.3376397 2.4307402 7.3614894 10.0782105 -0.5691795 10.7481646 4.3376397 3.8901840 4.7161569 9.1654615 11.6380714 10.6998787 11.3961755 11.5102367 7.9582291 10.6822344 9.5035545 10.0969760 9.8570166 1.4307670 11.8483408 11.3130129 NA 10.2871774 8.5754103 2.0157116 2.0157116 10.1389736 8.7594268 10.2030665 8.5182149 2.4307402 10.5068995 12.2723163 11.7504241 9.3133951 8.9543138 0.3390100 0.7575700 -0.3752700 1.0034000 -0.3572600 1.0983000 0.5217100 3.6569000 3.6569000 2.3878000 1.8040000 -0.1098500 -0.0463120 0.7051300 2.2619000 1.2830000 -0.1139100 0.5709500 -0.2605900 2.2495000 -0.0951200 0.0024969 -0.1509300 -0.2365500 0.8647300 0.8647300 -0.0559030 0.5804100 0.0144700 -0.0016629 -0.0505060 -0.3848100 -0.0874470 -0.0992090 0.2587100 0.9567200 -0.0646430 -0.6178600 -0.0042929 0.4799300 0.4386800 -1.0380000 0.3137000 0.2893500 -0.0738770 -0.0637030 -0.0463120 -0.0463120 -0.1375500 -0.2034900 -0.9702500 -1.0928000 -0.1139100 -0.3901800 -0.3901800 -0.0066338 -0.3218200 -0.3370700 -0.0672790 -0.3689600 -0.6495900 -0.1509300 -0.2873900 -0.9690300 -0.0875790 0.5804100 0.5899100 -0.2392400 -0.2828700 0.000 0.000 -0.294 -0.294 -0.362 -0.362 0.000 0.381 0.000 0.000 0.000 -0.635 0.000 -0.287 -0.287 0.865 0.000 0.000 0.263 0.580 0.580 0.575 -0.283 0.000 0.000 -0.375 -0.027 -0.124 -0.124 1.098 0.178 -0.316 -0.316 0.438 0.438 -0.404 1.804 0.289 0.289 0.296 0.296 0.000 0.000 -0.294 -0.294 -0.362 -0.362 0.000 0.381 0.000 0.000 0.000 -0.635 0.000 -0.287 -0.287 0.865 0.000 0.000 0.263 0.580 0.580 0.575 -0.283 0.000 0.000 -0.375 -0.027 -0.124 -0.124 1.098 0.178 -0.316 -0.316 0.438 0.438 -0.404 1.804 0.289 0.289 0.296 0.296 9.6094168 7.4080316 6.4531192 11.1501408 11.1650382 8.7983853 10.6733306 4.3173041 8.8778353 -0.5691795 12.6851901 11.2671338 4.0746082 0.4307135 1.0157116 6.8057916 3.5182204 11.2231356 10.7027985 9.5651783 9.9862997 6.5496938 7.5287838 10.0862827 5.0746082 4.0746082 -0.5691795 NA 8.9365634 2.8901743 5.2121102 9.7413647 4.2381066 11.4062166 9.8294957 0.4307135 10.2485351 -0.5691795 6.2381066 12.6943146 7.8057916 7.6056773 NA -0.5691795 7.4696711 -0.5691795 3.5182204 2.2381143 3.8901840 4.9543127 1.4307670 12.1452121 3.1311944 4.9226070 10.5155604 9.8144562 3.3376397 9.4279315 12.2098557 6.9929938 1.4307670 3.8901840 10.2047153 3.8901840 -0.5691795 1.7526630 1.7526630 13.052552 8.019467 7.877835 12.492292 9.153559 11.501544 12.439181 10.422274 9.876801 9.198936 12.257300 11.586203 7.361489 10.323295 1.430767 7.008181 9.831631 10.1864741 12.3574186 5.6205776 12.9314681 8.6181039 3.7526844 7.8736957 8.4290322 8.5624031 5.6975375 5.4531192 11.4819609 11.0800082 2.2381143 9.1067090 9.6511303 9.1607296 10.1931340 9.7794802 10.2699558 8.0782106 11.5680634 6.0746082 3.0157116 10.4724522 7.7161541 10.0297349 10.3263272 10.1914720 8.7299599 10.3703312 9.9650548 5.2887314 4.3849478 8.6247699 6.1449967 10.0782105 3.3376397 10.7481646 7.2251679 10.1058269 9.1654615 8.4447722 15.1163768 11.2949381 9.7816912 12.3596404 10.4648631 -0.5691795 1.0157116 9.2235423 8.4419793 8.9987080 TCGA-E9-A1N3 70 0 NA 1059 breast stage iiia t1c n2 m0 female 2010 NA no mixed histology (please specify) 7 white not hispanic or latino NA NA 3 1 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 13.6363636363636 13.6363636363636 9.09090909090909 36.3636363636364 27.2727272727273 10.9713452 10.3588571 11.9232183 10.2339742 8.3517114 8.8154403 11.3884590 9.6182713 9.7095670 13.2299131 11.1222938 10.8233233 4.9157599 12.6822721 3.6337218 8.9208060 7.0901707 8.3616438 8.0736489 13.8302696 4.3837458 14.5899675 1.4962067 9.8105040 11.5516378 8.5719665 0.4962067 9.5815595 12.6714575 2.6978628 7.8217504 5.9022111 -0.8257214 3.6005552 10.0504248 10.2166350 10.7396319 9.7526643 10.1551453 12.4431261 3.4222195 11.6802273 14.2076932 9.5078999 10.6236984 12.0214469 11.4834838 4.1966621 6.0991037 9.1931873 9.9212258 -1.8257214 10.9404065 3.3837458 4.5318430 4.3641171 10.3186313 11.7955423 10.5773037 11.3022860 12.9983057 7.5815591 10.5433437 10.7213187 10.9466063 11.3636530 5.4410784 11.4839102 11.2950156 -0.2407589 9.9896751 8.9751917 3.6045814 4.6337218 10.2925839 10.3379414 11.1118494 9.5340412 2.0811692 8.6701467 11.2532764 10.2864054 10.1679378 8.6681471 0.00597000 0.00597000 -0.00719580 -0.00719580 -0.00277070 0.00000000 0.00305220 -0.00470790 -0.00158030 -0.00158030 0.00027728 -0.00318590 -0.00263220 -0.00443120 -0.00443120 -0.00443120 -0.00304750 -0.00304750 -0.00249380 0.00458000 0.00638710 0.01195800 0.01195800 0.01195800 0.01181800 0.01181800 0.01181800 0.00972760 0.01056400 0.00597000 -0.00903820 -0.00719580 -0.00277070 -0.00277070 0.00000000 0.00000000 -0.00899060 -0.00470790 -0.00470790 0.54259000 0.54259000 -0.00158030 -0.00152430 -0.46344000 -0.00110870 -0.00110870 -0.00263220 -0.00263220 -0.00443120 -0.00443120 -0.00443120 -0.00443120 -0.00304750 -0.00304750 -0.00304750 -0.00249380 0.00458000 0.00458000 0.00638710 0.00652620 0.01195800 0.01195800 0.00235810 0.01181800 0.01181800 0.00972760 0.00388540 -0.45522000 -0.47065000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.543 0.543 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.471 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.543 0.543 0.000 0.000 0.000 0.000 0.000 0.000 8.8199501 NA 3.5666082 10.4640225 11.4207354 8.2703743 12.0568392 7.2617283 9.2002133 1.4962067 11.2469268 10.1323514 3.0322772 4.2403830 3.5666082 8.1544313 3.7592517 9.5046484 11.4284346 10.5449791 9.0134955 -1.8257214 7.8625419 9.8280325 5.5141412 8.8163434 2.6337334 0.1742786 9.3074340 6.6701463 5.6899924 8.6520501 3.3837458 10.0103026 10.3055056 3.8181450 7.6919612 NA 6.7779181 12.5633852 9.6606240 6.4871744 NA 1.9816335 8.0946446 0.1742786 3.4222195 5.6741386 2.4222061 6.7036046 0.9816335 9.8109164 NA 6.5794336 10.4132934 9.5471567 2.4962322 9.3042187 12.9811434 7.1572853 1.9816335 0.7592411 11.5494669 3.0811862 NA 4.6978516 -0.2407589 14.107734 5.393461 9.209778 12.682272 10.692945 10.921226 13.830270 13.747673 8.998335 11.002031 12.300674 11.413741 9.193187 7.540614 -1.825721 7.478072 10.429615 10.9880729 12.6925145 7.7076214 13.8397098 8.6337233 3.0322772 8.9499020 9.0252597 10.1158603 5.2077133 8.6661448 11.1222938 6.6255028 -0.8257214 12.1451166 2.7592624 7.0766970 9.2410536 9.8369600 11.1562157 9.5471567 9.3303749 11.6373051 4.4222195 12.2583551 10.7396319 10.0796786 10.1558590 12.3566084 8.5029666 10.1375490 10.7634747 9.2867312 -1.8257214 9.4713913 8.0929463 9.9212258 4.4780723 10.9404065 5.0446564 11.0851218 10.3186313 7.4293205 13.9995981 10.6444422 10.2785628 12.6668334 9.1284880 -0.8257214 NA 10.7926772 10.9766061 10.3641163 TCGA-E9-A1N4 41 0 NA 1000 breast stage iiia t2 n2 m0 female 2010 NA yes mixed histology (please specify) 4 white not hispanic or latino NA NA 3 1 2 2 4 4 3 8 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 1.733986e-07 21.7391304347826 43.4782608695652 0 21.7391304347826 13.0434782608696 10.7786260 10.3177500 11.4257205 9.7867083 8.3085170 8.8003454 9.8354433 10.4534014 9.9485509 12.4179362 9.5254460 10.3407140 2.0684301 11.8883246 3.6248262 10.6626421 6.6103206 8.4768195 10.5357931 11.9889553 3.2288956 12.4426997 2.6814043 9.2651523 9.3107607 7.0604495 0.5658896 9.6338093 11.1516719 2.6248262 6.8727487 7.6463002 -0.4340130 5.8201687 10.2073767 10.6094100 10.0992567 12.0236498 10.1262597 11.8582486 0.3028747 9.8272384 14.9016662 7.4705718 9.2784425 12.1264190 11.4161138 3.8138530 NA 9.5799474 11.6880000 NA 11.5326727 6.1256222 11.2516978 5.8201687 10.7867083 11.7848937 10.3110410 12.6679026 12.5963067 6.0999053 9.6670272 10.4580295 10.9091127 11.3576325 5.2193699 11.7348080 9.7291573 NA 10.1357825 9.4332057 2.9064866 5.7088852 10.8459244 10.7086722 10.2312628 10.1147488 5.3296941 4.3903581 12.0636956 11.9135483 9.2698306 9.0637788 -0.0037268 0.0054251 0.0151680 0.0151680 0.0244080 0.0124290 0.0165650 -0.6400100 0.0098071 0.0098071 0.0090312 0.0012738 0.0061090 0.0027745 -0.0033992 -0.0033992 -0.0066432 -0.0066432 0.0141900 0.0086135 0.0125900 -0.0482070 -0.0482070 -0.0482070 -0.0916840 -0.0916840 -0.0916840 -0.0216440 -0.0506410 -0.0037268 -0.6032200 0.0151680 -0.6542600 0.0244080 0.0174040 0.0174040 0.0165650 -0.6400100 -0.6428200 0.0109820 0.0078561 0.0146090 0.0059700 0.0059700 -0.6445200 -0.0247980 0.0061090 -0.0016629 0.0018030 -0.0033992 -0.0033992 0.0157270 -0.0066432 -0.0066432 -0.0066432 0.0141900 -0.0093052 -0.0016629 -0.0126530 -0.6798100 -0.0482070 -0.0482070 -0.6504500 -0.0916840 -0.0916840 -0.0177310 0.0000000 -0.0343590 -0.0600760 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 0.000 0.000 -0.648 -0.648 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.615 -0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 0.000 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.620 0.000 0.000 -0.648 -0.648 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.615 -0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.624 0.000 0.000 0.000 0.000 0.000 0.000 -0.155 -0.155 8.1794095 NA 4.6391743 9.9216450 11.0753720 6.0541951 10.7065438 9.3644041 8.3608085 3.3028893 12.3046526 11.3873302 1.8878372 NA 2.2288802 8.5181830 3.7883203 10.8855991 11.3368661 10.2226498 9.1837004 4.8389467 8.6338093 10.1680071 7.2617348 5.1707904 -1.0191704 -1.0191704 11.6749958 6.3472865 8.5929115 8.9660947 4.8998282 9.5148781 9.7207450 3.7088825 8.5565038 NA 8.0335326 12.9622641 7.4546703 7.4986338 -2.0191704 1.7883099 8.3274781 4.6248203 2.7358471 -2.0191704 6.1458710 3.5674238 3.6533926 10.6924163 -1.0191704 9.5724867 10.6809706 9.9841309 4.3208168 10.5654572 11.9834279 9.2824607 5.1608718 4.0894897 10.6630812 0.3028747 NA 1.4404207 0.7883516 12.007916 6.617589 9.783077 11.888325 10.629547 10.842051 11.988955 12.045960 9.335214 10.985185 13.178258 10.884470 9.579947 8.342908 1.788310 7.331904 10.342360 10.7709056 11.7551338 4.8011431 13.9201759 9.3352139 6.0842514 8.4847903 9.3379666 9.9148579 7.2709830 8.0470535 9.5254460 4.9582441 1.3028747 11.4877679 3.0684301 7.3019680 10.5949840 10.3627777 10.9188899 8.6586842 8.0143877 14.0220032 5.6883231 10.7627442 10.0992567 10.4584698 9.4956786 10.4808103 9.9267741 11.1630484 10.5649874 9.6917709 NA 9.3084159 7.8197429 11.6880000 6.0143865 11.5326727 7.4072295 10.9907931 10.7867083 7.3861056 13.8762320 11.1249853 11.1237097 12.9581102 9.7995467 4.2288956 0.5658896 10.6687775 11.1583840 9.5220610 TCGA-E9-A1N5 45 0 NA 1120 breast stage iib t2 n1 m0 female 2010 NA no mixed histology (please specify) 2 white not hispanic or latino NA NA 1 1 2 2 1 1 1 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 7.282743e-07 2.080784e-07 10.7142857142857 21.4285714285714 3.57142857142857 32.1428571428571 32.1428571428571 10.4683332 10.0395092 11.8230174 10.0964826 8.2368767 9.3566993 10.4307000 9.5089194 10.1139152 13.1423522 11.6323339 10.5084313 2.1494220 11.6403762 1.9794766 10.0576397 7.1443962 8.4971585 7.3588674 12.8720317 1.5644757 13.2661910 5.8374690 9.0248527 10.9434687 6.7410395 0.5644269 10.9685286 9.5167074 3.4389182 8.6215406 7.2832699 NA 5.1494138 9.6963084 10.7082598 9.7876488 10.8064346 9.4036552 11.5870504 0.9795132 10.7022964 15.1779723 8.2359807 10.9216369 11.3315324 10.4607838 4.8621340 3.4389182 9.4109866 11.5343176 -1.0206331 11.2046963 5.7996676 6.7209556 5.0238852 9.8147499 11.7910643 10.0576397 12.0452416 12.8486972 8.3588674 10.9120728 10.5786160 11.4450553 11.3460844 5.2648929 11.9096718 12.0524589 NA 10.5340778 9.1865033 4.4097711 5.8249791 10.2901017 10.2089086 10.3143209 10.1469071 3.5644513 7.2786966 13.0301879 12.2440781 10.2855506 9.7956726 0.00000000 0.00000000 0.00208050 0.00208050 0.00708260 0.00194180 -0.01119800 -0.56157000 0.31270000 0.31270000 0.33011000 0.00013863 -0.00664320 2.03150000 2.23890000 -0.54885000 0.00124810 0.00124810 -0.07361000 0.55655000 -0.04834200 -0.54330000 -0.54330000 -0.01230000 -0.02671400 -0.02671400 -0.02671400 0.30330000 0.00000000 0.00000000 -0.00691950 0.00208050 0.00708260 0.00708260 0.00847430 0.00847430 -0.01119800 -0.56157000 -0.55807000 -0.00041585 -0.01436600 0.31270000 -0.00429290 -0.00429290 -0.00429290 -0.00429290 -0.00664320 -0.00664320 -0.54562000 -0.55617000 -0.54994000 -0.54925000 0.00124810 0.00124810 0.00124810 -0.07361000 0.03002900 0.03002900 -0.04107700 -0.49392000 -0.54330000 -0.54330000 0.03919500 -0.02671400 -0.02671400 -0.53713000 0.03524200 -0.15567000 -0.16357000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.572 -0.494 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 0.303 0.000 -0.156 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.483 0.000 0.000 0.313 0.313 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.572 -0.494 -0.509 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.537 0.303 0.000 -0.156 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.483 0.000 0.000 0.313 0.313 0.000 0.000 0.000 0.000 7.8343573 NA 5.9794881 11.0208058 11.3947025 6.6885720 11.0539649 9.3969723 8.5294470 3.2274176 11.2723857 11.4863791 4.5030497 1.5644757 3.7343736 8.0958327 4.7074088 11.3070416 10.6941637 10.6024559 9.2034907 3.9794858 7.5069660 10.2468609 6.8498542 6.4872837 1.9794766 NA 10.2723857 7.6161136 7.6799283 8.1767057 6.2178937 10.7485209 10.1222342 3.3718097 9.3888798 -1.0206331 8.1266936 12.3254485 8.8758212 7.5030505 -1.0206331 4.7608490 7.6694867 NA 5.3888783 -1.0206331 6.3104056 4.3416087 3.6233401 10.6898649 -1.0206331 7.5417316 10.4501478 9.6580890 4.7343790 9.6152070 13.1265348 8.6412671 4.5340803 3.9794858 11.1352558 1.7868472 NA 0.9795132 1.3014121 14.266307 6.693735 8.664237 11.640376 10.169313 9.811588 12.872032 11.242171 8.596038 10.957484 12.928768 11.337591 9.410987 8.690295 2.679919 7.149414 10.640376 11.32904660 12.40431130 7.00739511 13.19038547 8.91465391 6.44709480 8.88035585 8.33483997 10.56781475 7.57567840 7.97101064 11.63233389 6.40575416 2.67991917 11.15877604 5.33704025 7.77348212 11.63345355 10.28668967 10.53599499 8.99490410 7.96533063 12.78754810 5.66598960 11.27200610 9.78764876 10.82850298 8.37823242 10.16312432 10.30535647 10.65632752 10.63903893 8.78684398 NA 9.10696749 7.01840829 11.53431757 3.50305610 11.20469634 8.35669933 10.89686102 9.81474988 7.75097825 13.40575367 10.18100028 9.64037618 12.00220350 10.95605302 1.78684724 -0.02048677 10.38356606 10.27697837 9.62154056 TCGA-E9-A1N6 52 1 678 NA breast stage iib t2 n1 m0 female 2010 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 2 4 1 2 2 2 5 2 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.7479538 9.9561572 11.6844030 8.4517007 8.8716238 9.3576774 9.9602909 10.6747919 10.6960176 14.4743996 9.1246249 10.7864908 0.9261513 13.8048055 1.7335279 10.5251627 5.5408890 8.1645847 11.7746071 12.3330491 -1.0736969 13.5025460 NA 9.6114629 11.8769179 5.8088226 -1.0736969 8.2115822 11.3139279 -1.0736969 8.2593351 8.1060886 NA 3.8330722 9.7140823 10.4521899 10.0215767 11.2444401 9.5834982 10.8694271 1.7335279 10.3597653 15.6624363 8.1568248 9.5083217 11.3168861 10.9780684 4.9261797 1.7335279 8.6266195 12.6103805 0.5111644 10.1135319 5.0961058 5.4180314 5.1929674 10.1190890 11.9993172 10.6747919 12.2789129 12.4804089 8.1788451 11.1574009 10.1267290 10.8930457 11.0059979 4.4180347 11.4696950 9.6429992 NA 10.7712778 9.7724536 2.2495364 5.6810669 11.4490065 9.8919641 9.5968360 9.8141619 1.9261892 9.3566322 12.3799648 11.6261859 9.8420591 9.1429257 0.5688100 2.9454000 -0.1747400 0.0000000 -0.1423200 0.1450300 -0.1527200 -0.1527200 1.0519000 0.4756400 1.1564000 0.0956530 0.3931300 0.0820430 0.0820430 0.0820430 1.2272000 0.1758800 -0.3297100 0.4087800 -0.2043600 -0.3871100 2.5577000 -0.4894200 -0.1327700 -0.1327700 -0.1327700 0.1477100 -0.2764300 -0.3527700 -0.1503600 0.0000000 -0.1522100 -0.1423200 0.1450300 0.1450300 -0.1793700 -0.1527200 -0.2803700 0.7015700 -0.1542600 -0.3975300 0.1043900 0.1043900 0.1043900 0.1043900 -0.8994700 0.3832000 0.0820430 0.0820430 0.0820430 0.0820430 -0.1374200 0.1758800 0.1758800 -0.3196100 -0.5016200 -0.5016200 -0.2115600 0.0731150 -0.3871100 -0.4667400 0.1222600 -0.1327700 -0.1327700 0.1477100 0.0852210 0.0029133 0.0029133 0.347 0.347 0.000 0.000 0.174 0.174 -0.320 -0.502 -0.204 0.000 0.000 -0.467 -0.467 0.122 0.122 -0.133 -0.133 0.380 0.380 0.148 0.148 0.000 0.000 -0.122 -0.122 0.000 0.000 -0.152 -0.152 0.145 0.145 -0.153 -0.153 -0.154 -0.154 -0.398 0.730 0.104 0.104 0.340 0.207 0.347 0.347 0.000 0.000 0.174 0.174 -0.320 -0.502 -0.204 0.000 0.000 -0.467 -0.467 0.122 0.122 -0.133 -0.133 0.380 0.380 0.148 0.148 0.000 0.000 -0.122 -0.122 0.000 0.000 -0.152 -0.152 0.145 0.145 -0.153 -0.153 -0.154 -0.154 -0.398 0.730 0.104 0.104 0.340 0.207 7.3313210 4.1356334 6.8390690 10.4879450 11.8975437 5.9207601 11.1803226 8.9512500 8.9392092 NA 11.4582921 11.1723266 2.9261892 0.5111644 3.5700378 8.1953063 4.9034577 9.9753476 11.5078511 10.8019292 9.5279506 2.6266260 8.3291918 9.7091779 5.6810669 1.2481097 4.7335333 NA 10.6768867 7.2793264 7.0606062 8.1135317 9.5834982 9.8596343 10.1870993 2.5111391 8.9801056 NA 8.0268421 11.9625251 7.6810676 7.3440322 NA 4.0554647 7.3732628 -1.0736969 3.9705776 2.7335279 4.3184976 6.1741068 0.9261513 11.6644832 2.0960931 8.0682871 10.3958216 10.1085741 3.5111391 10.0405729 12.5111423 7.9949581 4.6266202 4.2481097 10.1947218 4.2481097 NA 0.9261513 3.5111391 11.7955808 7.0910862 8.5167669 13.8048055 9.5618888 11.7831888 12.3330491 11.7146942 9.1729202 11.0337238 13.1175475 9.5879579 8.6266195 10.6021368 0.9261513 6.8390690 11.3688641 11.86594262 13.62064649 6.14534731 13.45505810 8.93740707 4.51114541 9.75431632 8.34824437 11.00007699 6.62662019 9.48937595 9.12462487 7.54456498 0.51116439 10.02749897 6.54088901 8.83551801 11.48722897 10.47017820 10.28867163 8.21850124 9.67437255 10.38304748 4.09610158 10.91208927 10.02157675 9.70096676 9.90274396 10.97262172 10.36445184 10.35506330 10.88255593 9.38765915 7.71408200 9.65773646 7.43761643 12.61038049 2.62662603 10.11353187 9.09985694 10.99965189 10.11908897 7.36497157 13.07616499 10.28921938 10.37222920 12.31822882 11.41753183 -0.07384873 NA 10.11353187 9.49413576 9.45561039 TCGA-E9-A1N8 48 0 NA 1039 breast stage iia t2 n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 9.09090909090909 22.7272727272727 0 22.7272727272727 45.4545454545455 10.3470559 9.2463306 12.1788046 9.9893088 8.8799299 9.0104864 10.2684752 10.5568327 11.1055039 12.8953992 12.8072914 10.4976016 0.4947740 11.2940681 3.9542149 11.1350315 8.2673761 8.2518989 10.3287308 8.7236053 NA 5.6102630 10.0891112 9.3220976 10.6244988 4.4016782 -1.0901885 8.3465355 10.5008788 2.4947740 7.9542184 7.0493759 2.3692431 4.3360905 10.3107034 11.9668004 8.7268077 9.3885936 11.5229228 11.9949645 5.0797493 12.5271767 14.4265705 7.9444028 9.4806285 11.0461744 10.8468300 4.4016782 2.3692431 9.7631337 11.2235574 NA 10.9501138 3.2317550 5.4176196 5.6647104 7.8106912 12.1104162 9.8956660 11.5835748 13.2445163 7.4333860 11.4994752 11.5737179 11.4839445 11.8591036 5.4176196 11.8854929 9.3506933 NA 10.1168384 9.1917541 6.6375407 2.9098307 8.8435147 11.4375454 11.6952765 8.8698261 0.9098115 7.0747313 12.3260938 10.8759689 10.2546747 11.0012594 0.1739200 0.1521400 0.2165300 0.2188300 -0.7840400 0.5215300 1.1407000 1.1449000 -0.7945300 -0.7945300 0.2435800 0.0000000 0.0000000 0.2313200 0.2313200 3.6569000 1.5546000 -0.0182160 1.3610000 -0.7980300 0.1459300 -0.8141300 -0.8106300 0.3774300 1.1619000 0.1029300 0.1029300 0.1541200 -0.0273980 0.1739200 0.0775740 -0.8053700 -0.8106200 -0.7903800 -0.7980300 -0.7980300 1.1407000 0.2085500 -0.8746300 0.2166800 0.2179100 -0.8481100 -0.0088428 -0.0088428 -0.0088428 -0.2236700 0.0000000 0.0000000 0.2313200 0.2313200 -0.8097200 -0.8097200 3.6569000 -0.0182160 -0.0182160 -0.8652300 -0.7980300 -0.8510500 -0.8141700 -0.4823900 -0.8141300 -0.8106300 0.3156200 -0.8304900 0.1029300 0.1541200 -0.7162200 -0.7402800 -0.7402800 0.000 0.000 0.231 0.231 3.657 3.657 0.231 -0.798 0.146 0.125 -0.357 -0.639 0.172 0.316 0.316 0.103 0.103 0.174 0.174 0.154 0.154 -0.716 -0.740 0.000 0.000 -0.645 0.152 -0.784 -0.784 -0.276 -0.798 -0.641 -0.641 0.217 0.217 -0.795 -0.795 0.000 0.000 -0.163 -0.163 0.000 0.000 0.231 0.231 3.657 3.657 0.231 -0.798 0.146 0.125 -0.357 -0.639 0.172 0.316 0.316 0.103 0.103 0.174 0.174 0.154 0.154 -0.716 -0.740 0.000 0.000 -0.645 0.152 -0.784 -0.784 -0.276 -0.798 -0.641 -0.641 0.217 0.217 -0.795 -0.795 0.000 0.000 -0.163 -0.163 7.884239 -1.090189 4.494787 11.317623 12.095164 7.012797 10.469201 8.659493 8.266914 NA 10.808803 10.331210 5.138642 NA 4.582249 9.611997 3.909821 8.736373 11.752371 10.813706 9.528210 0.494774 9.726808 10.356907 5.039108 2.816723 1.909811 0.494774 10.547355 2.717188 6.822714 9.745874 6.997287 10.337635 10.798187 -1.090189 10.067802 5.624069 8.629213 12.967731 8.084750 10.743900 NA 6.028766 7.240741 4.582249 3.079754 1.717166 3.553680 4.157755 4.997288 11.714963 6.932192 8.898509 11.032329 9.973219 7.157751 9.330837 12.584237 6.327677 2.909831 2.816723 11.001920 1.909811 1.231740 2.079737 6.369255 13.001660 8.997287 6.517154 11.294068 11.519695 10.543727 8.723605 12.558294 12.793282 10.993303 12.830270 12.047936 9.763134 6.981286 7.297842 8.629213 10.236254 11.2651751 11.7809592 6.8698258 14.8906317 8.5373578 3.1577552 10.2524543 9.1541880 10.7432993 4.6377435 6.6102630 12.8072914 10.5350763 -1.0901885 10.4576825 10.1211040 9.3484599 13.6975736 11.0332988 9.5106661 6.3360888 9.5373580 8.7442950 3.4947868 10.1692672 8.7268077 10.1143951 10.7419229 11.1865301 11.4926717 11.5190028 11.2015703 9.2585521 NA 8.7191581 6.0696957 11.2235574 6.6580172 10.9501138 8.4314245 11.4540641 7.8106912 8.8729657 15.0524297 10.1404450 9.7323949 12.6989501 11.6930269 0.9098115 -1.0901885 11.0251929 9.3630946 9.6394447 TCGA-E9-A1N9 58 0 NA 1101 breast stage iia t2 n0 m0 female 2011 NA no mixed histology (please specify) 0 white not hispanic or latino NA NA 4 4 1 2 3 2 1 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.213791e-06 2.774378e-07 15.9090909090909 15.9090909090909 6.81818181818182 34.0909090909091 27.2727272727273 10.2297585 10.5251133 12.0888505 9.1401774 8.0796357 8.5246683 10.7017000 10.2860059 9.9330109 14.3287752 10.3587450 11.1337693 0.8629076 11.9036934 4.4775996 8.7787694 6.6043575 9.1712291 8.3884109 13.0215786 -1.1370131 12.8313768 6.5908101 9.0403095 11.2775752 5.3864523 -1.1370131 8.1436378 11.1491589 -0.1371717 9.2870562 7.1390141 10.2165882 4.8852571 9.8621854 10.7607354 10.0452843 11.1834085 10.6810727 11.7783959 10.7282366 11.6258948 14.5957464 7.4294770 10.8783050 11.4174788 12.0767536 5.3706839 5.2722808 9.4544124 11.2080180 0.4478436 11.4581475 6.2975179 5.9181715 4.3223248 9.9031798 12.5171904 10.2455140 11.5498282 12.7094577 8.1780393 10.6838667 9.9019392 12.3725413 11.5211015 5.5211010 11.8602459 12.4628028 NA 10.1932467 9.0403095 3.5471537 4.9503518 8.8727186 10.0971086 10.1143724 9.1214561 2.6702512 8.6442496 12.7950125 11.8741172 10.7577078 9.8236159 0.48045000 0.48045000 0.26514000 -0.03626500 -0.00581400 0.51891000 0.39263000 0.53925000 3.21400000 3.14720000 1.61250000 0.27300000 0.27300000 -0.14207000 3.32620000 -0.23826000 1.62730000 0.42016000 -0.28667000 -0.13807000 3.65690000 1.54160000 -0.00097017 -0.00097017 1.08310000 0.48630000 1.28340000 0.23876000 0.32109000 -0.24727000 -0.30193000 -0.11299000 -0.01271300 0.26702000 -0.01409000 -0.02821800 0.39263000 0.53925000 -0.01174900 0.22769000 0.02370600 -0.93622000 -0.19087000 -0.19087000 -0.19087000 0.20717000 0.27300000 0.27300000 -0.61316000 -0.14207000 -0.31106000 -0.31106000 0.58327000 -0.23533000 -0.23435000 -0.21305000 -0.13807000 -0.13807000 -0.58235000 0.00000000 -0.31937000 -0.00097017 -0.08824200 -0.11221000 -0.01904000 -0.27906000 -0.58520000 -0.59478000 -0.32333000 0.273 0.273 -0.238 -0.238 0.947 0.947 -0.287 -0.138 -0.585 0.000 0.000 -0.318 0.000 0.000 0.000 0.486 0.486 0.000 0.393 0.239 0.239 0.000 -0.323 0.000 0.000 0.000 0.000 0.399 0.000 0.000 0.000 0.393 0.393 0.206 0.000 -0.936 0.765 -0.279 -0.279 0.026 -0.177 0.273 0.273 -0.238 -0.238 0.947 0.947 -0.287 -0.138 -0.585 0.000 0.000 -0.318 0.000 0.000 0.000 0.486 0.486 0.000 0.393 0.239 0.239 0.000 -0.323 0.000 0.000 0.000 0.000 0.399 0.000 0.000 0.000 0.393 0.393 0.206 0.000 -0.936 0.765 -0.279 -0.279 0.026 -0.177 7.3345656 -1.1370131 6.7877028 10.4208323 11.1346448 6.7093210 10.9004370 9.3065070 8.0304084 0.8629076 11.8790018 10.6817957 3.1108142 5.9072849 3.3223176 9.6144340 5.3706839 9.6018267 11.3952459 10.4431486 8.8068699 4.0328150 9.0490042 10.3304955 6.6043575 5.2722808 0.4478436 0.8629076 10.3315140 8.6227781 8.0024415 8.0551826 10.4440906 10.0194724 10.5779940 4.3547413 8.9857179 -1.1370131 8.4958850 13.0339886 7.2071862 7.3942715 -1.1370131 5.9818321 7.8401699 3.1848198 3.9503564 -0.1371717 6.1666713 4.9757998 3.1848198 10.1881954 1.1847881 10.6043570 10.5715429 9.6409672 4.3223248 10.0120019 12.7300722 8.1179184 2.7697717 3.9921702 10.4881422 3.7208694 NA -1.1370131 7.1436608 12.450235 7.915458 9.018973 11.903693 9.678273 10.085081 13.021579 16.700228 8.667021 11.740558 13.091107 10.383018 9.454412 8.911377 3.032824 8.110817 10.918850 11.7580866 12.0423326 7.5031348 13.4531250 8.7802622 8.2933424 9.2807425 9.5877023 11.2827422 6.4174796 8.4117118 10.3587450 5.3706839 0.4478436 11.4858569 8.1757731 8.4254757 11.0415548 10.4136368 10.9750037 8.3687016 8.5103484 11.2324874 5.7208722 10.5394818 10.0452843 9.7455330 9.6376771 11.3071284 9.3795750 11.2557440 10.7527742 9.0747784 10.8720188 8.2390586 7.1803030 11.2080180 6.0820575 11.4581475 6.7083804 11.2688292 9.9031798 7.5975997 14.1076611 10.5080981 10.0202369 11.9879805 11.4881422 2.1848198 2.3223320 10.6613618 10.3156460 9.8401699 TCGA-E9-A1NA 58 0 NA 1112 breast stage iia t2 n0 m0 female 2011 NA yes mixed histology (please specify) 0 white not hispanic or latino NA NA 1 2 1 2 1 2 2 1 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-06 5.895554e-07 16.8831168831169 32.4675324675325 3.8961038961039 28.5714285714286 18.1818181818182 9.7313715 10.6280448 11.5032824 9.7635480 9.2314929 9.5617089 9.3366576 10.0900878 10.0732092 14.4693667 11.0010382 11.2555950 0.8916525 12.0339626 2.2135650 9.7064922 8.5628888 8.5063528 9.3394149 11.5608232 3.6642325 14.2934779 5.1646616 9.1010961 10.2116912 6.3123058 -0.6933878 9.7185514 10.6415123 3.2135650 7.5474714 7.3592479 NA 3.7661075 9.7960266 10.2557775 9.2623303 10.6238103 9.7080932 10.6401152 2.8302350 10.3667007 14.3011001 8.1475840 9.1545207 10.7321585 11.5266051 4.0071237 6.6989977 9.1592099 12.1674763 -0.6933878 11.3568691 4.4965071 6.4513381 6.5209989 9.3828278 12.1196598 10.1470648 11.1582342 12.6847042 7.9213899 10.8890575 10.1879969 11.1336259 11.2318638 5.0481490 11.1965645 8.0088532 -0.1084253 10.5447865 8.8322011 0.8916525 6.8574274 10.3445704 9.9706831 10.0451949 9.5456821 2.0071237 6.0071192 12.0013647 11.6298759 8.3359678 9.6178610 2.3799000 0.6566300 0.0643680 0.0341130 0.0280600 0.3987800 0.9200600 -0.7024400 -0.0015243 0.0258120 0.6840300 0.0225850 -0.0346310 -0.6632800 0.9081500 0.7147100 0.6144400 -0.0324500 0.0199230 0.7275400 -0.0495590 -0.0496950 -0.7094400 2.5837000 2.0119000 0.6535100 -0.0713380 0.2179100 -0.3275100 -0.1050000 -0.6917800 -0.7066600 0.2807400 0.1213800 0.8677100 0.0167050 -0.7445500 -0.7024400 -0.7273800 0.8884600 -0.3337600 0.0225850 -0.6968500 -0.6903300 -0.6903300 0.6708500 -0.0346310 -0.0467180 -0.4088200 0.5618700 -0.6872400 -0.3221700 -0.0139530 -0.3456100 0.6795700 -1.0217000 0.0000000 0.0120970 -0.6982100 -0.0083005 -0.7153300 -0.7066600 -0.3418200 -0.0959810 -0.4143200 0.0116790 0.1617500 -0.6916000 -0.6901500 0.000 0.000 -0.683 -0.683 0.000 0.000 -0.682 0.000 -0.686 0.000 0.000 -0.694 0.000 -0.169 -0.324 0.127 0.000 -0.318 1.004 0.000 0.000 -0.288 -0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.174 0.000 -0.673 -0.673 0.000 0.000 0.000 0.000 -0.690 -0.690 -0.112 -0.112 0.000 0.000 -0.683 -0.683 0.000 0.000 -0.682 0.000 -0.686 0.000 0.000 -0.694 0.000 -0.169 -0.324 0.127 0.000 -0.318 1.004 0.000 0.000 -0.288 -0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.174 0.000 -0.673 -0.673 0.000 0.000 0.000 0.000 -0.690 -0.690 -0.112 -0.112 8.6642322 -0.1084253 4.6817191 10.5702430 13.1909940 8.5246138 11.5175039 8.0028133 8.6706616 NA 11.9938373 11.5725165 6.2075474 1.1140338 3.8302452 7.6035967 4.5546073 10.3720965 11.8550206 11.7827936 8.5088042 4.3510770 8.0582245 9.7737763 6.5734669 3.1646576 8.5920825 NA 10.5276632 1.7661287 6.8497116 8.9414914 5.9213911 9.3451125 10.6930817 1.7661287 8.4740985 NA 7.7681598 12.0563403 7.5920825 6.2433187 -0.6933878 5.6642325 7.9720165 NA 2.8916525 -1.6933878 4.2374184 2.7295963 2.4766150 10.6770953 1.3066705 7.6989977 10.1808933 9.7043550 7.6465306 8.8516447 12.6587927 9.3359675 4.3941437 3.8612706 13.8296909 3.3941437 NA -0.6933878 0.3067289 14.704545 7.655408 8.413897 12.033963 10.420188 10.522820 11.560823 12.259695 9.387092 11.030981 13.756506 11.415695 9.159210 8.618429 1.891652 8.507579 11.439662 10.6252232 11.5739059 5.6375958 13.4849557 8.5149148 5.0209244 8.9958047 7.6598268 9.4999716 7.8282806 9.1124241 11.0010382 7.0036483 -0.6933878 10.9879188 5.1395718 8.0164880 10.3123049 8.8322011 10.6010139 7.1553030 9.8859963 12.4172452 4.7824138 11.0035197 9.2623303 10.4693863 9.7834265 10.7300589 10.6473650 10.6898446 10.0388478 8.7620076 4.2374184 8.8196184 6.8951705 12.1674763 5.1268573 11.3568691 8.9595253 10.2266610 9.3828278 7.9287321 15.0219452 10.3818252 9.7676480 11.7195148 11.0149021 -0.6933878 NA 10.2318639 10.4918655 9.1498162 TCGA-E9-A1NC 61 0 NA 1203 breast stage iib t2 n1 m0 female 2011 NA no mixed histology (please specify) 1 white not hispanic or latino NA NA 4 3 NA NA 5 5 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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9.56649363 3.09075183 11.47853828 10.43456287 6.03977667 10.42763864 11.02608905 2.66284352 4.89811643 10.65003113 9.56649363 10.63893995 8.76318547 3.38027230 7.71525093 12.66661461 11.85268079 8.91801466 10.53370379 0.02132300 0.34064000 -0.38739000 -0.00636680 -0.38291000 0.05979400 0.09754200 0.00485790 -0.00110870 -0.00110870 0.54118000 -0.01119800 0.01964300 0.00041593 0.00041593 0.00041593 0.40944000 -0.00539920 0.02286500 0.01377200 0.01698500 -0.41245000 -0.41245000 0.01474900 -0.02000100 -0.40827000 -0.00802440 -0.01711600 -0.41058000 0.02132300 -0.38179000 -0.38739000 -0.40838000 -0.38291000 -0.39837000 -0.39837000 -0.30991000 0.00485790 -0.34996000 -0.02041200 -0.39830000 -0.40429000 0.76619000 -0.36283000 -0.01505400 -0.39630000 0.00694350 -0.40141000 0.02328600 0.00041593 -0.40063000 -0.40595000 0.02398700 -0.00678130 -0.00678130 0.02286500 0.01377200 -0.38055000 0.00597000 -0.40074000 -0.41245000 -0.41245000 0.01419000 -0.41399000 -0.00802440 -0.01037000 0.01084200 0.02651400 0.38584000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.391 -0.391 0.000 0.386 0.000 0.000 -0.381 0.000 -0.383 -0.383 -0.398 -0.398 0.000 0.000 0.000 0.113 0.000 0.000 0.000 -0.380 -0.113 -0.113 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.412 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.391 -0.391 0.000 0.386 0.000 0.000 -0.381 0.000 -0.383 -0.383 -0.398 -0.398 0.000 0.000 0.000 0.113 0.000 0.000 0.000 -0.380 -0.113 -0.113 9.10942403 NA 6.25175128 11.72778758 11.90293757 5.85546902 10.75846317 8.81330214 9.17918930 1.72818175 12.78994710 11.24117044 6.68238649 NA 3.72819264 8.11559200 4.41268670 12.09841051 11.51818949 10.59591014 9.00962346 0.50578933 8.14724767 10.87430424 7.59679206 5.39656711 1.92082683 -0.07917317 10.02346717 3.44440204 8.13272335 8.03717903 8.04753948 10.44182705 9.88734066 3.62127827 9.62905694 6.89237888 6.76632483 13.33862185 8.24726486 9.16757596 1.72818175 1.72818175 8.07312024 4.77881833 4.87503297 NA 6.83969888 3.77881833 5.07058253 11.69108618 7.58972005 11.21258156 10.50954987 10.49495566 6.03977667 9.53186000 13.66619446 8.40465112 5.75372486 5.22461529 9.81716771 2.62126655 4.67571997 1.50578933 6.85747348 12.697879 6.772584 7.624739 11.871938 10.243890 10.772975 4.593258 10.823587 8.865474 10.675305 13.133256 10.975440 8.465800 7.824717 1.242755 8.187622 9.518888 10.231448 11.664197 4.728193 14.581638 8.767892 7.287157 8.755306 5.898114 8.646065 7.494483 5.675723 10.382826 6.635081 NA 9.136368 9.200446 7.674286 11.771022 9.931363 9.925758 7.827726 9.936947 6.313153 8.095761 9.860246 8.853050 10.705879 9.635939 10.620841 10.535085 10.659772 9.791200 7.424661 NA 9.383961 8.155222 9.334463 9.105711 10.559271 6.708738 10.363779 9.531860 6.875032 14.929308 10.465800 10.324380 11.881561 10.693562 4.505796 NA 9.714439 8.553830 8.175864 TCGA-E9-A1ND 75 0 NA 1266 breast stage iib t2 n1 m0 female 2011 NA no infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 3 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.629947e-06 4.508365e-07 16.6666666666667 23.3333333333333 1.66666666666667 20 38.3333333333333 9.4401408 9.1220996 11.3620374 8.5423033 8.3279464 9.3030524 9.7441054 10.2495700 11.3410684 12.6555847 10.0953279 10.1439298 1.8066128 11.3666864 1.5842410 11.6311308 7.5306529 8.8696364 4.8819142 3.3915890 NA 10.9084147 8.1259760 9.6439301 10.3980153 8.8114489 1.5842410 11.4328571 11.3296284 3.8572545 8.8541400 8.9722515 NA 5.4911252 9.7049039 10.4038810 9.7109386 10.0827510 9.2812017 11.2310928 1.9992785 6.7407387 14.0494179 7.3764389 9.0368187 10.5996492 10.5203813 2.9061594 NA 8.5070664 13.8907706 -1.0008659 9.4709468 6.8757887 8.1259760 4.9061643 10.7242117 11.6754491 10.4281552 10.9292697 12.7670423 7.5538604 10.6449301 10.0771488 11.3699590 10.5306531 4.1285574 12.8291925 6.5070668 NA 11.0313174 9.3223264 3.9100035 6.0545533 11.6458303 10.3245771 10.3623113 9.4881159 0.9992785 7.9992717 13.4611347 13.0332108 10.6226959 9.2683984 0.1914100 0.0476940 0.0175440 0.0197830 -0.2854900 -0.3006300 0.3427500 0.0349590 -0.2869100 -0.2869100 -0.2778600 -0.2711700 -0.2711700 -0.2742800 0.0255310 0.0255310 0.0063871 -0.2794100 0.1188800 0.0260920 -0.5859800 -0.2660000 -0.2660000 0.0379240 0.0345360 0.0345360 0.0269350 0.0245480 -0.2613100 0.1914100 -0.6723300 0.0175440 -0.2854900 0.0332670 -0.2801300 -0.5865700 -0.2863200 -0.2852500 0.0465590 0.3133800 0.1121300 -0.2869100 0.0109820 0.0420240 0.0420240 0.1677500 -0.2711700 -0.2648000 -0.2742800 0.0435820 0.1106700 0.1106700 0.0204830 -0.2788200 0.0311550 0.1188800 0.0260920 0.2415600 -0.2704500 0.3556100 -0.2660000 -0.2660000 -0.5874500 -0.5658500 0.0269350 0.0297470 0.0125160 -0.2518900 -0.2587800 -0.271 -0.271 -0.274 0.000 0.000 0.000 0.119 0.000 -0.270 -0.266 -0.266 -0.266 0.000 -0.271 -0.271 0.000 0.000 -0.070 -0.261 0.560 0.000 -0.289 -0.259 0.000 0.000 0.000 0.000 -0.285 -0.285 -0.280 -0.280 0.340 0.000 0.314 0.314 -0.287 0.000 0.000 0.000 0.000 0.000 -0.271 -0.271 -0.274 0.000 0.000 0.000 0.119 0.000 -0.270 -0.266 -0.266 -0.266 0.000 -0.271 -0.271 0.000 0.000 -0.070 -0.261 0.560 0.000 -0.289 -0.259 0.000 0.000 0.000 0.000 -0.285 -0.285 -0.280 -0.280 0.340 0.000 0.314 0.314 -0.287 0.000 0.000 0.000 0.000 0.000 7.9211126 NA 4.7271908 10.6962391 11.4966245 6.9923232 10.8777058 10.7112440 8.6566079 NA 12.2146529 11.7505667 0.9992785 -1.0008659 2.6997071 8.8956041 5.6574828 11.5835295 11.4165967 10.5379456 9.2013954 2.9992785 9.2846738 10.2238763 7.3699593 11.9065379 6.5306529 NA 10.0887221 1.3211777 6.9765515 9.2672286 9.4286784 9.9728542 10.1597733 4.3568270 9.7806313 3.3915890 8.6268056 11.7822698 7.9822652 8.3144210 0.5841929 1.8066128 7.5030975 0.5841929 2.3212066 NA 7.1336981 3.9557963 3.9534701 10.0375048 -1.0008659 10.6240671 11.1041979 10.0760873 6.4587035 11.7288924 15.1866044 9.6028980 5.4086609 4.9534701 9.6001138 0.5841929 NA 4.5538581 4.9534701 12.0085404 8.6699278 8.0299387 11.3666864 10.4535709 10.7109386 3.3915890 7.3166843 9.1641786 10.6765508 13.4683410 10.2933179 8.5070664 7.3346621 0.5841929 7.6286285 10.4318135 11.489872 13.151953 4.086733 14.423831 9.023026 8.900138 8.963613 8.507066 10.058467 8.275396 5.208724 10.095328 9.259015 -1.000866 11.089715 7.059967 9.927294 12.417388 10.677432 11.027178 8.382976 8.980839 9.054554 7.787175 10.195037 9.710939 10.893710 9.697976 10.769936 10.781041 9.149019 10.769936 8.950556 NA 10.556084 6.391589 13.890771 8.046396 9.470947 6.408663 10.750816 10.724212 7.237677 13.848286 10.269567 10.589391 12.736625 9.916644 2.321207 NA 10.296761 10.113014 9.623153 TCGA-E9-A1NE 28 0 NA 1088 breast stage iib t2 n1 m0 female 2011 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 5 3 4 2 3 4 4 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.363527e-07 1.040392e-07 6.66666666666667 16.6666666666667 0 50 26.6666666666667 11.04557983 10.08884149 12.11530081 10.25439775 8.75037236 9.74454695 10.04466842 10.83462226 9.44853986 14.42216625 11.34957505 11.11008248 1.09484410 12.11147589 3.82276073 8.97519051 7.38255400 8.96751650 8.79441424 11.88580103 2.67980660 13.34269504 4.64943152 9.02631788 10.74791066 8.22283595 0.09477656 12.19927662 8.87538138 3.73870300 8.15823653 7.94189918 -0.32012585 5.23439402 10.36309122 10.12343846 9.74454695 10.86488612 9.87743047 11.56499213 1.09484410 11.10990821 14.32979005 7.99018964 9.81550498 11.54218326 11.65768033 5.30429564 3.87620259 9.97824869 12.46225643 NA 11.00398473 5.92773056 8.79528155 5.37096633 10.31703278 11.87291881 10.25786230 11.95039153 12.90992471 7.64366358 11.13940656 10.68368040 11.57777563 11.81743579 5.49572074 11.74903017 10.16361999 -0.90508835 10.16395579 9.79528139 3.38135260 7.05484414 9.96597687 10.54682541 10.55862151 10.51453861 4.24459027 8.39633805 13.04844704 12.88274424 9.91262487 9.20336611 0.1210800 0.1210800 -0.0661180 0.0000000 -0.0100940 0.3904800 0.2319400 -0.1708200 0.2105400 0.2105400 0.2105400 0.1700100 -0.0922830 -0.0769450 -0.0769450 -0.0769450 0.0533790 0.0533790 -0.0069195 -0.0895310 0.0052749 0.0153080 0.0153080 0.0153080 -0.0051227 -0.0051227 -0.0051227 0.1265300 0.1210800 0.1210800 0.0073985 -0.0661180 -0.0100940 -0.0376190 -0.0544200 -0.0544200 0.2319400 -0.1708200 -0.1708200 0.0907200 -0.2050700 0.2105400 -0.0370820 -0.0370820 -0.0370820 -0.0370820 -0.0922830 -0.0922830 0.0649400 -0.0769450 -0.0769450 -0.0769450 0.0533790 0.0533790 0.0533790 -0.1178300 -0.0895310 -0.0895310 0.0052749 -0.0444150 0.0153080 0.0153080 -0.0248100 -0.0051227 -0.0051227 0.1265300 0.0223040 -0.0022168 -0.1118200 0.000 0.000 0.000 0.000 0.000 0.000 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.121 0.127 0.127 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 -0.171 0.000 0.000 0.211 0.211 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.121 0.127 0.127 0.000 -0.117 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.171 -0.171 0.000 0.000 0.211 0.211 0.000 0.000 0.000 0.000 8.0461265 NA 4.7672681 9.8214856 12.1750763 6.3885426 10.5268615 10.0268792 8.6011494 4.3042920 11.4195848 11.1267858 4.2445903 3.7952786 3.5542696 8.4178964 4.2445903 11.4337173 11.5934416 11.1661364 9.3254626 2.1823109 7.8925034 9.2118353 8.7926781 5.7168922 2.7387030 NA 10.9949537 6.5624470 7.9308922 8.6637477 7.2772362 9.9624409 10.5116392 5.8696296 8.0706899 2.4871519 8.1609308 11.9161174 8.3986223 6.3848597 -1.9050884 6.9434643 8.1046700 NA 5.3894636 0.4167317 8.9866254 3.5601647 5.4611651 10.4319060 1.2647766 9.6330306 10.0355223 9.7499251 6.3140095 10.8685990 14.4460397 9.9062164 7.1172098 5.4346916 13.3668882 -0.9050884 NA 1.0948441 0.4167317 13.3982300 6.7241987 8.7196373 12.1114759 10.4857952 10.6959160 11.8858010 11.9189054 9.3146152 11.4670266 13.4661759 11.4215521 9.9782487 8.3486892 0.9021894 8.1875990 11.9154196 11.25313577 11.18710329 5.97748372 12.88925601 9.03808906 8.98053805 9.06206800 8.42799705 10.38479141 8.85722369 8.50741172 11.34957505 5.84972910 0.09477656 11.04867438 6.18759951 7.27016635 11.24204659 11.26711293 10.19089791 9.45184370 9.51585455 12.56021677 8.38946227 12.40452052 9.74454695 10.56015301 9.59618137 11.03625612 10.08600920 11.09484166 10.73282501 9.27350657 -0.90508835 9.06340776 8.61383881 12.46225643 8.46334821 11.00398473 6.05484414 10.81833835 10.31703278 8.03000660 13.47952426 10.29082893 10.21313388 12.59050937 10.39605200 6.71689352 2.55426958 11.47922071 10.41733324 9.72009391 TCGA-E9-A1NF 60 1 1072 NA breast stage iia t2 n0 m0 female 2011 NA no mixed histology (please specify) 0 white not hispanic or latino NA NA 1 2 5 2 2 2 5 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.040392e-06 2.774378e-07 13.1578947368421 39.4736842105263 0 28.9473684210526 18.4210526315789 10.3404133 9.9674715 11.0901371 8.1601165 8.5006603 10.0096740 9.2435327 10.3355825 11.0586559 12.5663446 10.0523605 10.6087202 0.8933622 12.0991233 3.4782988 9.6963849 6.0897269 8.5937698 9.0208947 11.8744216 1.3083609 11.5952141 5.6659186 9.5031122 10.3230855 6.4782923 -0.6915226 8.8377982 10.3710883 3.1157158 7.7800430 8.3417905 NA 5.7346310 9.6029883 10.1157226 9.4427938 10.2956315 9.9468035 10.6314224 0.3083609 10.4857872 15.8284184 8.3965461 9.7992185 10.3818397 10.8513994 4.8319279 5.7678004 9.2420582 11.3383449 NA 11.4431148 7.6347973 6.2625647 6.0632548 10.5704625 11.6615144 10.4498361 12.3314288 13.0877792 8.6482177 10.9549263 10.2108784 11.4628693 10.9737035 4.1663459 12.8585131 9.2552739 -0.6915226 10.6620658 9.1349160 3.4025994 6.2508820 10.7507928 10.4951009 9.9816766 9.6582017 2.6302890 8.9359014 13.0001111 11.8309491 9.4593841 10.0371384 0.0893720 -0.2209600 -0.4178400 0.4691300 0.0901410 -0.4138800 -0.4655900 -0.1166500 -0.4429700 -0.4429700 0.4602400 -0.2239200 -0.1139100 -0.4186000 0.0065262 0.0065262 0.1517300 0.1517300 0.1380600 0.4640000 3.6569000 -0.2662500 -0.2662500 0.3017000 0.2507400 -0.7318700 -0.4400500 0.1291800 -0.1259000 -0.0219210 -0.7901700 -0.4178400 -0.0713380 -0.4088200 0.0000000 0.0000000 -0.4655900 -0.1166500 1.0095000 -0.8007800 0.0065262 -0.4390800 -0.4202500 -0.4202500 -0.7480300 -0.0125760 -0.1139100 -0.1139100 -0.4186000 0.0065262 -0.3147100 -0.3147100 0.1517300 0.1517300 0.1535200 0.1380600 0.5394200 0.5394200 0.2686000 -0.2465500 -0.4248400 -0.2662500 -0.4104700 -0.1345800 -0.4404800 0.3181900 -0.4309400 -0.1009200 -0.7464700 -0.224 -0.224 -0.419 0.000 0.152 0.152 0.138 0.539 0.202 0.705 -0.247 -0.145 0.280 1.132 0.722 -0.190 -0.440 0.252 0.252 0.265 0.000 0.000 -0.452 -0.381 -0.381 -0.418 0.469 -0.434 -0.434 -0.414 0.000 -0.267 0.182 0.141 0.000 -0.431 0.029 -0.408 0.000 0.096 -0.262 -0.224 -0.224 -0.419 0.000 0.152 0.152 0.138 0.539 0.202 0.705 -0.247 -0.145 0.280 1.132 0.722 -0.190 -0.440 0.252 0.252 0.265 0.000 0.000 -0.452 -0.381 -0.381 -0.418 0.469 -0.434 -0.434 -0.414 0.000 -0.267 0.182 0.141 0.000 -0.431 0.029 -0.408 0.000 0.096 -0.262 8.8591145 4.6302948 6.4479197 10.7502743 11.5018930 7.8674388 10.6587544 9.7837768 8.5395888 -0.6915226 12.3263938 12.5007883 3.7678031 2.3083609 3.3958306 7.8857964 4.8002217 11.4991182 11.3503689 10.5651660 9.0665908 3.1157158 7.9230773 10.3062527 7.3690634 4.9230779 3.7006838 NA 10.9843246 4.4376539 8.1412575 8.0362879 5.3307341 10.1387957 9.5786629 1.8933234 8.4530257 NA 8.4011248 12.5998261 10.0665908 11.5341775 -0.6915226 0.8933622 7.4116550 0.3083609 4.5178237 1.6303123 4.5562945 6.5279226 0.3083609 11.2464769 NA 6.4479197 10.3472865 9.9745915 5.3527621 9.6052838 12.8486167 8.6029883 2.7678031 4.3958306 10.4555725 5.9230779 NA 4.3958306 1.3083609 12.052810 5.115724 9.044769 12.099123 10.712445 10.177961 11.874422 16.091788 9.141258 10.269817 12.851037 9.675782 9.242058 8.203185 NA 7.742996 10.194064 10.9838837 12.6997454 5.1663499 13.4281995 9.0294496 5.3744553 9.0962700 7.5031245 10.0698191 6.8161619 7.2567352 10.0523605 7.3472865 1.6303123 10.8082134 5.5937691 6.5785221 12.0686717 10.8191318 11.1798878 8.3417905 9.4103432 10.1515034 4.5937721 11.6405860 9.4427938 10.7967098 9.9221571 10.7677992 10.0088073 10.3588964 10.7507928 8.7861258 2.1157324 9.3206988 7.8072171 11.3383449 3.8319279 11.4431148 10.4214585 10.7631038 10.5704625 7.0018540 14.4103022 10.5839102 10.5098789 11.9458981 10.2099887 0.3083609 NA 10.1027834 10.3778173 9.5431850 TCGA-E9-A1NG 62 1 786 NA breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 3 5 2 2 1 5 2 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 1.040392e-07 25 25 6.25 25 18.75 10.1170403 10.0708156 11.5752847 9.3506351 8.5583415 8.2343725 9.5425229 10.2767761 10.4183303 12.6646010 10.8122673 10.5386887 NA 12.2438234 2.9284082 10.4597835 5.6595850 8.5814620 7.7295609 12.2800481 1.9849903 12.8020307 5.0919029 9.7478813 9.6552332 5.3398286 -0.7154859 12.9232516 9.9596208 1.9849903 8.0377627 8.4891170 0.6064422 5.3179697 9.7972864 10.6154627 10.3330328 10.9765074 9.8793370 11.0084201 -1.7154859 8.0999290 15.7810564 7.4032012 9.3766422 11.4726710 11.2372871 4.4138310 2.8695161 9.4619654 11.9893141 3.3289370 11.9566397 7.8061462 7.2873605 5.0260121 10.8448787 11.6217496 10.6888892 12.4880468 12.5723304 8.5536727 11.3538278 10.7529637 11.2360128 11.0114026 4.9139043 11.7686135 7.8863166 -0.1305234 10.6028062 9.1401930 2.0919029 6.5085475 10.8244317 10.4888113 9.6288417 9.4817625 6.2387429 10.0963220 13.7541241 12.4540012 9.6431971 9.8100666 0.01195800 0.01195800 0.00000000 0.00000000 -0.00152430 -0.00013862 0.00000000 -0.00353670 0.01502800 0.01502800 0.01502800 0.00027728 0.00027728 -0.00387790 0.00485790 0.00485790 0.00527490 -0.00277070 -0.00871460 0.00124810 0.00263570 0.00458000 0.00458000 0.00458000 -0.28477000 0.00471900 0.30425000 0.01936300 0.01195800 0.01195800 -0.00373950 0.00000000 -0.00152430 -0.00414040 -0.00013862 -0.00013862 0.00000000 0.00000000 -0.00353670 -0.00761010 0.00208050 0.01502800 -0.00277070 -0.00277070 -0.00207840 -0.00110870 0.00027728 0.00027728 0.00173320 0.00485790 -0.31563000 -0.31623000 0.00527490 -0.00277070 -0.00277070 -0.00871460 0.00124810 0.00124810 0.00263570 -0.30663000 0.00458000 0.00458000 0.04670000 -0.31120000 0.30425000 0.01936300 0.00055459 -0.25273000 -0.30733000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.018 -0.307 0.000 0.000 -0.318 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.307 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.018 -0.307 0.000 0.000 -0.318 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.307 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.1687162 NA 5.9284011 10.5957265 11.3321810 6.2280567 10.5719697 10.0909787 8.7623445 0.2845141 11.8705647 11.6569621 1.0918691 NA 3.1425278 8.6132207 5.1914363 11.2002386 11.5570299 10.3838937 8.9338022 2.0919029 7.9463238 9.7238573 5.9139019 5.3506351 7.2004249 NA 11.3794483 4.8237035 8.4866697 8.0444340 5.4138276 9.6610892 9.8807356 5.2034087 8.7853877 NA 8.6387954 11.9642459 7.4008897 8.4253758 -0.1305234 3.5699528 7.7336946 2.1914363 4.3720118 NA 4.3720118 4.8695062 3.5324791 10.4743704 -0.7154859 7.8198214 10.2560894 9.8657464 6.4086677 9.5157670 12.5216811 9.2774843 1.7439888 4.2845437 11.3304762 4.6595878 -1.7154859 1.6064896 1.4544918 13.3756506 5.6420979 8.7582515 12.2438234 10.5401647 10.2056430 12.2800481 11.4202552 9.3878336 10.8501240 13.3154716 9.5300986 9.4619654 8.8246740 -0.1305234 7.4842179 10.9385105 11.0702027 11.9720309 5.6939357 13.6650739 9.3546668 4.8844563 8.6332739 8.4073740 10.0486503 7.8918760 6.5419329 10.8122673 7.7398731 1.0918691 10.8800365 7.2445475 6.6318566 12.8465497 10.5664759 10.7204765 7.8874119 8.6939368 11.0394334 5.2845474 11.4137242 10.3330328 10.5238461 9.6960568 11.0781492 10.2586020 10.6584986 10.4927802 9.3124519 -1.7154859 9.1488403 8.0673806 11.9893141 3.8695062 11.9566397 10.3435523 10.3131427 10.8448787 6.8959763 13.7043415 10.1618300 10.2514118 12.9674308 10.0239046 0.6064422 NA 10.1823914 10.4845249 8.9823822 TCGA-E9-A1NH 71 0 NA 576 breast stage iib t2 n1 m0 female 2011 NA no infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 2 1 4 3 4 1 5 5 4 3 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 2.427581e-07 18.1818181818182 9.09090909090909 0 22.7272727272727 50 9.9894618 9.9837381 11.4494126 9.3036255 8.1564922 9.5053038 9.3438988 10.2367545 10.4981837 12.6555635 11.0319890 9.8149278 1.6464392 12.9890650 3.5939632 9.5678506 6.6138675 8.1564922 10.1319765 13.2393589 -1.1610079 13.8057655 6.1610089 9.6896182 10.1468498 8.8048641 NA 9.1887701 10.7863515 3.4829386 6.7874468 7.7757176 -1.1610079 4.8834742 9.3975005 10.0654921 9.6302427 11.6049875 10.3269199 10.5066350 7.1699971 11.4618180 15.3090713 7.9649582 9.8683670 11.0958782 11.0813607 4.4537875 3.4829386 9.1233255 11.9810273 -0.1608466 10.9961109 6.7217226 6.1244812 4.5115060 10.3198700 12.0214742 10.7749815 12.3497204 13.1904332 8.3389258 11.0756920 10.2157479 11.1988294 10.8034207 4.5669978 13.0127569 9.7668578 3.2314017 10.3026042 8.6432108 3.2362018 5.6970621 11.1038156 10.2990237 9.4972912 9.4501046 3.4829386 10.1342747 13.6114975 11.4845131 10.0893782 9.9554238 0.82333000 0.85245000 0.00847430 0.60575000 -0.29426000 0.02504900 0.00124810 -0.00067607 -0.30616000 -0.30616000 -0.61997000 0.01838300 0.01838300 -0.28857000 -0.28857000 -0.28857000 -0.29236000 -0.29236000 -0.27452000 0.01530800 0.00833510 -0.29945000 -0.29945000 -0.29945000 -0.00637360 -0.00637360 0.00097064 0.02020300 -0.29863000 -0.29863000 0.00000000 0.01077300 -0.29426000 -0.30063000 0.02504900 0.02504900 0.00124810 -0.00067607 -0.00067607 0.01936300 -0.63093000 -0.30616000 0.00360760 0.00360760 0.00360760 0.00360760 0.00912560 0.04216600 -0.28857000 -0.28857000 -0.28857000 -0.28857000 -0.29236000 -0.29236000 -0.29236000 -0.27452000 0.01530800 0.01530800 0.01887400 -0.59828000 -0.29945000 -0.29945000 -0.28513000 -0.00637360 0.00097064 0.02020300 -0.30768000 -0.28834000 -0.26623000 0.000 0.000 -0.289 -0.289 -0.292 -0.292 -0.275 0.000 0.000 -0.010 -0.598 -0.299 -0.299 -0.285 -0.285 0.000 0.000 0.525 0.823 0.000 0.000 -0.308 -0.297 0.000 0.000 0.000 0.000 -0.294 -0.294 0.000 0.000 0.000 0.000 0.000 0.000 -0.306 -0.306 0.000 0.000 -0.101 -0.101 0.000 0.000 -0.289 -0.289 -0.292 -0.292 -0.275 0.000 0.000 -0.010 -0.598 -0.299 -0.299 -0.285 -0.285 0.000 0.000 0.525 0.823 0.000 0.000 -0.308 -0.297 0.000 0.000 0.000 0.000 -0.294 -0.294 0.000 0.000 0.000 0.000 0.000 0.000 -0.306 -0.306 0.000 0.000 -0.101 -0.101 8.4574654 NA 5.8277657 10.8728469 11.0881933 6.4054376 11.0024150 9.1645651 9.3792079 NA 12.1502605 11.5664451 4.4829386 0.8390727 3.5939632 8.4127269 4.9683627 10.5826520 11.2946639 10.9479309 9.3965436 7.1699971 8.1382877 10.2548216 6.5670008 5.3626417 0.8390727 -1.1610079 11.0316809 3.0870045 7.2442211 7.5220746 7.5771720 10.5385872 10.8977481 5.2653431 7.9580208 NA 8.0509680 12.5322400 9.0014712 7.7519691 0.4240621 1.6464392 8.3724093 4.4537875 4.9051680 NA 4.6970621 5.7698167 2.1610170 9.8482085 NA 7.4389931 10.5960530 9.5627408 5.2820246 9.2820234 12.2511203 7.0870077 3.1610008 3.7932717 11.0186779 4.9888255 NA 2.9265498 0.8390727 12.912492 4.745969 8.695505 12.989065 10.280986 10.751595 13.239359 12.118835 8.917231 10.435735 13.416686 8.582231 9.123326 9.506191 NA 7.239959 10.972222 11.4186314 12.0219397 6.3936685 13.5150909 8.6480440 5.4684367 8.6496514 6.9983456 10.6380416 7.0726997 8.1811542 11.0319890 7.0289039 2.0089888 11.4654733 7.5670000 6.0625017 11.6650323 10.2918358 10.9612607 7.5737896 8.4427063 11.5595378 4.7932769 11.2676703 9.6302427 10.3314337 9.3056662 10.9081938 9.9004510 10.2985115 10.4183957 8.9384275 -0.1608466 9.2170387 7.2726652 11.9810273 5.3468754 10.9961109 10.8714700 10.7907288 10.3198700 6.9838908 13.8492145 9.6978379 10.3636215 12.6876050 10.8534491 -0.1608466 1.6464392 9.8565843 10.5451440 9.5132720 TCGA-E9-A1NI 51 0 NA 300 breast stage iia t2 n0 m0 female 2011 NA no mixed histology (please specify) 0 white not hispanic or latino NA NA 1 1 5 2 4 1 5 6 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.387189e-07 17.6470588235294 17.6470588235294 5.88235294117647 23.5294117647059 35.2941176470588 10.1524938 9.6425393 11.3056529 8.2747164 9.6216852 9.0073034 9.4332624 9.8491156 9.9732867 13.2106206 10.7110003 10.4494908 7.0993162 12.7076308 2.7608384 9.2465114 5.8548135 8.2526900 9.6668026 12.8480958 3.9183767 13.9762300 2.9672793 10.2553757 10.7033515 6.2303222 2.0603933 11.5400386 11.1006870 2.6453558 6.0938200 7.4612764 NA 3.4527140 9.4234370 10.1871017 9.4069110 10.8081707 10.0813772 10.6723442 7.3732802 11.8167451 14.5703578 8.2629377 9.1767411 11.2328248 11.0297838 4.2698485 4.0603933 8.7486477 10.7306109 3.5198312 10.8298219 4.1047895 5.2698523 5.2698523 10.1458698 11.8254762 10.9476179 11.1832253 12.3724293 9.4256261 11.0691760 10.2271880 10.5136679 10.5542527 4.2698485 11.6285909 10.3101033 -0.9395375 10.7912919 9.2612960 4.1082819 5.4179504 11.1041081 10.5038589 10.3749805 9.6906643 1.8677384 9.0632122 12.9164337 11.5632291 9.9027476 9.3755469 0.468950 1.564000 0.047890 0.037396 -0.142320 0.229310 0.048120 0.048120 -0.635190 -0.635190 0.767920 -0.127460 -0.127460 -0.046718 -0.046718 -0.046718 0.388990 0.388990 0.125050 0.339660 0.160550 0.037641 0.037641 0.896080 -0.315870 -0.315520 -0.343890 0.753050 -0.281190 -0.667720 -0.481870 0.048698 -0.142320 -0.095120 0.229310 0.229310 0.048120 0.048120 0.319960 -0.372450 -0.055792 -0.635190 -0.586880 -0.586880 -0.570640 -0.561370 -0.127460 -0.127460 -0.046718 -0.046718 -0.649490 -0.649490 0.388990 0.388990 0.388990 -0.168730 0.351370 0.351370 -0.191370 -0.583330 0.037641 0.055515 0.129180 -0.298510 -0.343890 0.753050 -0.038170 -0.535510 -0.535510 -0.127 -0.127 0.000 0.000 0.389 0.389 -0.169 0.351 0.000 0.800 0.231 0.000 0.000 0.129 0.129 -0.316 -0.316 -0.267 1.297 0.753 0.753 0.000 -0.536 0.000 -0.392 0.000 0.000 -0.142 -0.142 0.229 0.229 0.000 0.000 0.000 0.000 -0.626 0.108 -0.571 -0.571 0.000 0.000 -0.127 -0.127 0.000 0.000 0.389 0.389 -0.169 0.351 0.000 0.800 0.231 0.000 0.000 0.129 0.129 -0.316 -0.316 -0.267 1.297 0.753 0.753 0.000 -0.536 0.000 -0.392 0.000 0.000 -0.142 -0.142 0.229 0.229 0.000 0.000 0.000 0.000 -0.626 0.108 -0.571 -0.571 0.000 0.000 8.8531876 -0.9395375 4.8932894 10.7797861 12.6550718 7.2136962 11.3996906 8.9859518 9.0174994 NA 11.3171957 11.5907475 2.9672793 4.3083245 3.3823214 8.5198289 3.8152885 10.7288391 11.4700534 10.9090202 9.1224434 3.9672885 8.0319410 9.8596789 4.9430399 4.8932894 2.8677581 NA 10.8737777 4.4179470 6.3083245 8.7677564 6.9792606 10.3210699 9.8572481 2.9672793 8.3504159 NA 7.0660214 11.5824884 8.9276761 7.0660214 -0.9395375 7.2600699 9.1845186 5.8018648 3.6453558 1.0603933 3.3823214 5.0840983 2.6453558 11.0391077 -0.9395375 7.2892157 10.3394274 10.1864564 3.5198312 8.5522503 12.7162634 7.0261815 3.1478602 3.3083317 13.3091402 4.4179470 NA 3.3083317 1.8677384 13.523635 6.503341 9.066022 12.707631 10.458072 11.983539 12.848096 11.989656 9.001445 10.736795 12.876381 9.930762 8.748648 9.804390 1.382335 7.841757 12.157606 10.4777224 12.4841698 7.0883028 12.6908908 8.7849113 3.9672885 9.3811979 8.8942836 9.6702317 5.7883177 7.7042537 10.7110003 5.7328227 2.5198186 10.8777807 6.6072918 7.9591198 10.7195013 9.7159280 11.0792929 9.2755663 9.5208532 10.6500485 2.8677581 12.0170584 9.4069110 10.8442140 10.3277692 11.6575187 9.7319384 9.8797780 9.9881753 8.1999486 -0.9395375 8.5947195 7.0758685 10.7306109 2.8677581 10.8298219 8.6714222 10.0014449 10.1458698 6.7042537 13.0529816 10.4660706 9.9970352 12.4261729 10.6430097 -0.9395375 1.3823352 9.2783549 10.0021785 8.9612642 TCGA-E9-A1QZ 61 0 NA 755 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 3 4 3 6 4 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 3.467973e-08 12.5 12.5 0 25 50 10.2671055 9.6975334 11.4764819 8.7376178 8.8987311 9.5130847 8.6211134 9.8324912 9.4405042 13.3487400 11.6703571 10.7547157 1.7407117 12.8230257 3.2812680 8.9528047 6.1267540 8.9465996 9.7519224 11.9667789 0.8662354 13.3964292 4.8048280 9.4284684 10.4057080 6.7569966 NA 10.1274748 9.8145934 3.3256598 7.0260973 7.3687265 0.6032168 3.0886165 10.0163964 11.6638876 9.9439319 10.5544764 9.4227321 11.3834033 4.8358534 10.4166522 14.2717443 8.1305906 8.7138054 11.1450627 11.3458379 4.4310078 1.2812531 9.3799536 12.0052444 NA 11.0500682 5.7650785 7.2090419 6.7930167 10.4015014 11.7081835 10.4069999 11.2865372 12.7689780 8.7458094 10.9679829 10.6976125 11.2419896 10.8339327 4.4710899 11.8720845 9.7791154 0.2813125 10.8274346 9.4278322 2.8692200 6.8586922 10.4063542 9.8936713 10.5076757 9.8601080 3.5666691 7.2924910 12.3334920 12.3359527 9.7691036 9.0419835 0.495800 0.495800 0.000000 0.000000 0.075847 0.070960 -0.116260 -0.116260 0.064511 0.064511 0.064511 -0.090626 -0.090626 0.051956 2.439500 3.090800 0.067375 0.067375 -0.092610 -0.169930 -0.089699 -0.266250 0.333990 0.333990 -0.118870 -0.118870 -0.126010 0.367230 -0.109640 -0.078677 -0.087712 0.000000 0.075847 0.075847 0.070960 0.070960 -0.116260 -0.116260 -0.251530 0.225610 0.223790 0.064511 -0.201620 -0.201620 -0.201620 -0.201620 -0.090626 -0.090626 0.051956 0.051956 -0.249020 -0.249020 0.067375 0.067375 0.067375 -0.092610 -0.169930 -0.169930 -0.089699 -0.254910 -0.266250 0.333990 -0.073877 -0.118870 -0.118870 0.367230 0.083054 0.047552 0.054376 0.000 0.000 0.000 -0.233 0.000 0.000 0.000 -0.170 0.000 0.080 -0.255 0.068 0.334 0.000 0.000 -0.119 -0.119 0.000 0.496 0.367 0.367 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.116 -0.116 0.226 0.226 0.000 0.000 -0.202 -0.202 0.000 0.000 0.000 0.000 0.000 -0.233 0.000 0.000 0.000 -0.170 0.000 0.080 -0.255 0.068 0.334 0.000 0.000 -0.119 -0.119 0.000 0.496 0.367 0.367 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.116 -0.116 0.226 0.226 0.000 0.000 -0.202 -0.202 0.000 0.000 8.4821622 -1.7188062 6.3687265 9.6805415 11.9696232 6.7277680 10.1566289 9.9203600 9.0153127 6.4661393 11.5257760 11.3726576 2.9817066 7.1267540 3.4511847 7.9764920 3.6388153 11.2177175 11.4989184 11.3779787 9.3500419 2.9817066 7.8492199 9.9967966 8.7821055 10.6199999 1.6031694 NA 11.2421705 6.8281581 7.4436547 7.0091837 7.1330127 9.4007495 10.2201080 5.6299918 7.6778683 NA 8.4015016 12.7943126 8.7345342 7.3008540 -1.7188062 4.7406955 8.9519199 -1.7188062 3.3256598 1.2812531 8.0576967 5.0094547 4.4907177 10.3480256 NA 9.2742020 10.2481294 10.3029376 6.0494478 10.5169787 13.6309940 9.4505622 3.2354667 5.4809372 13.5303400 0.2813125 NA 1.4511715 2.0886165 15.016600 6.703328 9.298768 12.823026 10.449936 11.088417 11.966779 12.208486 11.287614 10.885817 13.612215 10.581330 9.379954 8.634410 2.088617 7.750905 11.317609 10.664698 11.251909 7.932315 13.306443 9.002363 8.524438 7.667126 9.737618 9.255370 7.883034 7.194153 11.670357 5.988623 3.566669 10.175702 7.088619 7.402460 10.627223 10.675190 10.375671 9.552727 8.340608 11.778117 7.645398 13.606657 9.943932 10.600653 9.789058 10.989701 9.297375 10.454628 10.376990 8.574735 -1.718806 8.739444 7.664968 12.005244 8.805805 11.050068 5.974750 10.490717 10.401501 6.992070 13.981541 10.384551 10.362747 12.724984 9.357411 5.690655 1.866235 10.202733 9.469234 9.360082 TCGA-E9-A1R0 58 0 NA 860 breast stage iia t1c n1 m0 female 2011 NA no infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 3 1 4 3 6 4 4 8 6 2 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 1.733986e-07 33.3333333333333 33.3333333333333 0 20.8333333333333 12.5 9.975250 9.469418 11.808317 9.167790 8.458033 8.574712 10.444432 9.297179 10.482786 13.011110 11.801340 10.880346 2.317883 13.045049 3.552340 9.302549 6.965126 8.254171 10.451399 13.330750 1.037804 14.265516 4.037769 9.102068 11.177871 7.581356 0.230449 9.447162 8.296506 2.400347 7.464036 7.005203 -0.769551 3.722269 9.711711 10.241644 11.348222 11.190600 9.221938 11.052191 1.552328 10.461638 14.532663 7.693103 10.525609 10.738459 10.425789 5.088396 8.037772 9.075122 13.831026 -0.769551 11.498959 6.693941 5.100780 4.459235 10.456226 11.707922 10.322513 12.057660 12.531055 7.863412 11.084311 10.887065 11.518562 11.132226 5.141510 12.252177 12.370048 -0.769551 10.466431 8.923032 2.623422 4.497204 10.256594 9.867494 10.179514 9.986139 2.552352 9.583012 13.300496 12.205906 10.075907 9.416531 -0.0012473 -0.0012473 0.0105640 0.0105640 0.0126550 0.0066653 0.0056966 -0.4715900 0.0037465 0.0037465 0.0037465 0.0000000 0.0000000 -0.0008316 -0.0008316 -0.0008316 0.0037465 0.0037465 0.0052749 0.0015255 0.5199600 -0.5066000 -0.0139530 -0.0078863 -0.0219210 -0.0219210 -0.0219210 -0.0131270 -0.0012473 -0.0012473 -0.0184900 0.0105640 0.0126550 0.0126550 0.0066653 0.0066653 0.0063871 -0.4715900 -0.4887400 0.0053971 0.0068585 0.0037465 -0.0029091 -0.0029091 -0.0029091 -0.0029091 0.0000000 0.0000000 -0.0008316 -0.0008316 -0.0008316 -0.0008316 0.0037465 0.0037465 0.0037465 0.0052749 0.0015255 -0.0069195 0.0512450 -0.5144500 -0.5066000 -0.0139530 0.0056919 -0.0219210 -0.0219210 -0.0131270 -0.4106900 -0.0172540 -0.0172540 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.014 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.014 -0.493 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.411 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3152250 NA 5.6227342 10.7377157 11.2191012 7.5833649 10.9521566 9.0688957 8.8122951 4.9718838 11.3228434 11.1084885 3.7539789 6.4300895 2.2304182 7.5455661 3.1846136 10.4340704 11.5286224 10.0276727 9.4398699 3.1846136 7.6898485 10.3438332 7.2444371 10.1350511 3.4783377 -1.7695510 10.5896171 7.2638391 8.6205857 7.6291599 6.4925118 10.5790562 10.1570831 4.7382112 8.3297645 NA 7.8561254 13.3330484 8.5065409 8.2332314 -0.1845885 1.0378039 7.9819605 -0.7695510 4.5523463 0.2304490 6.3493582 6.3262875 3.7539789 10.2621178 NA 8.4398699 10.2917877 9.5210115 5.6733614 9.3500061 11.7222696 8.5534715 1.8153705 3.7539789 11.4790854 2.7539682 NA -0.7695510 2.4003467 14.2622575 4.6898471 8.5978313 13.0450491 10.1335452 10.0105461 13.3307504 14.1485577 9.0003947 10.7220191 12.8014581 10.1878814 9.0751224 9.6493232 -0.1845885 7.7676349 10.8726939 11.1138235 11.9224871 6.6898485 13.4855912 9.2856991 6.7578940 9.1500247 8.6908724 10.4392849 6.8303289 8.2583225 11.8013396 6.3441592 1.2303875 10.9723048 7.3018793 6.6662112 10.1293957 10.2137665 10.3215213 7.4196484 8.2597037 11.4482228 7.2444371 11.5533784 11.3482220 10.6647841 9.8674942 9.5846659 9.7936127 10.1511415 10.5464152 9.3915484 -0.1845885 9.3973454 6.1191590 13.8310264 7.4925118 11.4989585 6.5613338 10.5772073 10.4562265 7.0601393 14.1355215 10.8305618 10.6587768 12.4043279 10.5284791 3.3178829 3.4281290 10.2472249 10.0880088 9.7821248 TCGA-E9-A1R2 51 0 NA 1063 breast stage iiic t2 n3 mx female 2011 NA yes infiltrating ductal carcinoma 17 white not hispanic or latino NA NA 1 5 2 2 1 4 1 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.121176e-07 13.6363636363636 22.7272727272727 4.54545454545455 34.0909090909091 25 9.868333 9.877533 12.058313 9.213921 8.986865 9.522602 10.402720 10.464611 9.786539 14.331278 11.774466 10.784283 2.049561 13.585550 4.237197 8.587007 6.434236 8.665918 8.706197 12.446416 2.580097 14.204180 5.219498 9.020478 10.782023 6.706196 NA 10.125195 8.318440 2.580097 8.717276 6.890876 -1.120294 3.833841 10.030030 9.972405 9.342150 11.574224 10.191396 11.506270 10.503072 11.067928 14.305225 7.553770 10.553840 11.331374 11.777872 4.580085 6.019199 8.964456 11.121035 NA 10.540090 4.580085 5.924043 5.108466 9.838926 12.108166 10.438069 11.473273 12.776926 8.765344 11.643898 11.351100 11.239123 11.244056 5.322592 11.571610 11.626162 -1.120294 10.475372 9.714119 4.098428 4.902016 10.503530 10.620694 11.193665 10.461790 5.418807 10.245970 12.054886 11.617951 10.214480 9.394362 0.53081000 0.53081000 0.00555290 -0.00429290 0.00138680 -0.00277070 -0.02288100 -0.60041000 3.65690000 2.82490000 1.19720000 -0.01188700 0.00596760 0.00319100 0.00332990 0.00332990 0.01516800 0.01516800 0.55107000 0.00013863 0.00569190 0.00110930 0.52801000 0.52801000 -0.02616700 -0.57704000 -0.02534600 0.54824000 -0.00678130 -0.58823000 -0.00871460 -0.59009000 0.00138680 0.01614600 -0.00277070 -0.00277070 -0.02288100 -0.59273000 0.00180300 0.00000000 -0.00041585 -0.61700000 -0.58745000 -0.58745000 0.00221930 0.00221930 -0.58618000 -0.58618000 -0.58941000 0.00319100 -0.58690000 -0.58848000 0.01516800 0.01516800 -0.59341000 -0.58255000 -0.59117000 -0.59117000 0.00569190 -0.59517000 -0.58579000 0.52801000 0.55000000 -0.59224000 0.44782000 0.00610900 -0.05469000 0.00847430 -0.58833000 0.000 0.000 0.000 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.527 0.000 0.549 0.000 0.000 0.000 0.522 0.000 0.548 0.000 -0.588 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.598 1.197 -0.587 0.000 0.000 0.000 0.000 0.000 0.000 -0.582 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.527 0.000 0.549 0.000 0.000 0.000 0.522 0.000 0.548 0.000 -0.588 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.598 1.197 -0.587 0.000 0.000 0.000 7.8074258 NA 6.8796482 10.2261618 11.9993998 8.2243654 10.4669568 8.7291313 8.2805277 2.3390804 10.6274214 12.5028128 5.9671110 2.5800972 2.7865336 9.0620424 3.4646160 9.5990369 11.5661486 11.1739816 8.8796482 1.2015711 7.5198933 8.7546293 7.0395190 6.4495036 5.0890998 -0.1202942 9.7243539 6.0694723 7.3674881 8.1370357 9.3256974 10.5430149 10.8425441 4.4342346 8.4246127 5.9776806 7.5904546 11.6238512 9.6286794 6.8852730 -1.1202942 -1.1202942 8.9842467 0.4645637 4.2015790 -1.1202942 5.9564633 3.7381301 3.4646160 10.4855904 4.0890998 8.0694729 10.9009751 9.8037183 5.0495741 9.6403680 13.4201394 7.7895408 4.1275755 3.0495785 12.2157361 -1.1202942 NA -0.1202942 1.2015711 13.8335294 5.7865389 8.8192272 13.5855504 10.5257567 10.7854111 12.4464156 12.6449342 9.6227995 10.6519626 12.4687140 11.6534054 8.9644564 9.0939671 -0.1202942 7.8964565 12.3594283 11.4523483 11.2969732 5.9457364 13.4836192 8.0115051 6.2890395 8.2371999 9.1180529 10.3140313 6.4110296 8.2415919 11.7744658 5.0694745 0.4645637 9.8576434 7.7592311 7.7219673 10.4192915 9.8718783 10.1633152 9.2730386 8.9564636 11.1141661 6.1084659 12.0328438 9.3421502 9.8985436 10.3594284 11.8400121 11.1857097 10.6303550 10.7507833 8.4129779 -1.1202942 9.1017184 6.1370362 11.1210354 6.0495741 10.5400897 5.8569284 10.9233589 9.8389256 7.0395190 12.9105738 10.3684924 9.8126009 13.2727033 10.2584848 2.4646160 -1.1202942 10.5338365 9.6084190 9.8859742 TCGA-E9-A1R3 70 0 NA 78 breast stage iiic t2 n3 m0 female 2010 NA yes infiltrating ductal carcinoma 10 white not hispanic or latino NA NA 2 1 6 2 4 1 3 8 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.733986e-07 22.7272727272727 9.09090909090909 4.54545454545455 36.3636363636364 27.2727272727273 10.9508904 10.4543570 11.2567358 9.7985222 8.5897279 9.3521695 9.9751501 10.3276313 9.4877112 14.0202404 10.7828127 10.8682349 1.0028825 12.1079783 3.2882847 10.0736801 5.2790143 8.6981167 9.4302012 12.8328092 5.1526337 13.2443501 5.0252548 9.9571900 10.4806465 8.9722748 NA 12.6978990 10.8062122 2.9097731 7.7015927 8.3615394 NA 4.5574775 10.6931045 11.3119383 10.5425318 12.0067575 10.2293005 10.6205853 7.0335552 10.1215050 14.6044560 8.2117691 8.5205578 11.4020327 11.2765382 3.7033333 3.1321655 9.1957974 11.0828730 NA 11.3993593 4.9336246 6.7809649 5.6893886 11.2127985 11.9284427 10.0025360 12.3437120 13.1376755 8.4354302 11.5956957 10.8305922 11.3660649 10.8194720 5.5027348 11.7535953 9.7911987 0.3248106 10.9297402 9.5995439 2.9580074 6.3560346 11.1539048 10.0414644 10.1985681 10.0155128 1.9097731 10.2567358 13.6296810 11.2402477 9.9354721 9.2293005 0.91804000 0.91804000 0.01530800 0.00000000 -0.31774000 0.32334000 -0.00277070 -0.00277070 0.31370000 0.31370000 0.31370000 -0.30897000 -0.30897000 -0.00912860 -0.00912860 -0.00912860 -0.00041585 -0.00041585 0.67307000 0.00235810 0.30346000 0.02763800 0.02763800 0.02763800 -0.26287000 -0.26287000 -0.25213000 0.30250000 -0.30004000 -0.32412000 -0.00304750 0.01530800 -0.66217000 -0.31972000 0.32334000 0.32334000 -0.02097400 -0.00277070 -0.00277070 0.93345000 -0.64856000 0.31370000 0.00027728 0.00027728 0.00027728 0.00027728 -0.30897000 -0.30897000 -0.00912860 -0.00912860 -0.00912860 -0.00912860 -0.00041585 -0.00041585 -0.00041585 0.67307000 0.00235810 0.00235810 0.30346000 -0.32193000 0.02763800 0.02763800 0.30138000 -0.26287000 -0.25213000 0.30250000 -0.00705760 -0.44545000 -0.48201000 -0.309 -0.309 0.000 0.000 0.000 0.000 0.673 0.000 0.303 0.885 -0.322 0.000 0.000 0.301 0.301 -0.263 -0.263 -0.324 0.594 0.302 0.302 0.000 -0.445 0.000 0.000 0.000 0.000 -0.318 -0.318 0.323 0.323 0.000 0.000 0.933 -0.649 0.314 0.314 0.000 0.000 0.000 0.000 -0.309 -0.309 0.000 0.000 0.000 0.000 0.673 0.000 0.303 0.885 -0.322 0.000 0.000 0.301 0.301 -0.263 -0.263 -0.324 0.594 0.302 0.302 0.000 -0.445 0.000 0.000 0.000 0.000 -0.318 -0.318 0.323 0.323 0.000 0.000 0.933 -0.649 0.314 0.314 0.000 0.000 0.000 0.000 8.6331554 -1.9971175 6.3692100 9.9812412 11.1792173 6.3031487 11.1622866 9.0386496 8.7484451 1.4623141 12.1767215 11.8537197 2.9097731 1.5878450 2.9097731 8.5953451 4.6322449 10.5901970 11.6187478 11.2479953 9.4260043 3.4947356 8.1022361 9.9446695 6.0418081 6.3516160 6.8701674 NA 11.2357588 3.8357826 7.2579167 7.8310247 5.9157766 9.4689290 10.3686639 2.5878450 7.3360432 -1.9971175 8.2520016 12.1337001 8.7932369 5.9276998 -1.9971175 -1.9971175 8.4479031 4.9336246 2.1728075 NA 4.4623207 4.4122802 2.6467387 10.2903121 4.0689803 7.6175982 10.2746431 10.0325206 4.7171335 9.7063593 12.1295121 8.4987431 2.5878450 3.4947356 10.5997768 2.0028825 1.3248106 4.6322449 0.8102374 12.863672 3.810248 8.416516 12.107978 11.237257 10.900356 12.832809 12.364969 9.290601 11.016734 13.384668 7.921752 9.195797 9.787114 -1.997117 8.026642 11.679507 10.9917504 11.6338379 6.4664134 13.1638209 9.2086816 5.7171335 8.9628902 7.6102187 10.2434173 6.5497831 8.3482935 10.7828127 6.5689426 1.9097731 10.8620347 6.9007340 6.0873249 11.9533531 10.2105127 11.0498417 8.1765656 8.6858827 12.0005970 4.9097779 11.5270872 10.5425318 10.5772453 9.3719404 11.5456784 10.4294151 10.2475495 10.4786217 9.6148352 -1.9971175 9.1814037 7.5362177 11.0828730 5.2220549 11.3993593 8.9060169 10.4671788 11.2127985 6.9454029 13.6566291 10.1948728 10.7175631 12.9223569 9.8322145 0.8102374 0.6988408 10.0837058 10.7737586 9.8939125 TCGA-E9-A1R4 66 0 NA 186 breast stage ia t1c n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 3 6 2 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-06 6.935946e-07 9.89010989010989 59.3406593406593 4.3956043956044 15.3846153846154 10.989010989011 10.4114437 10.4744571 11.1454595 10.0350355 8.7076321 10.3617645 10.1484935 9.4127062 9.1565534 13.0960916 9.8146454 10.3539001 -1.3313362 12.2923662 3.0610331 9.8101818 6.4368981 8.1705505 8.2423605 12.2436615 -1.3313362 13.3783356 2.4760706 9.0921863 11.0224115 9.2574279 0.6687545 14.1772459 11.6463510 1.6687092 8.0781044 6.6112285 NA 3.7561800 10.2834232 9.7941268 9.2242610 10.8069851 9.3552139 10.9895138 5.6229099 10.9442558 14.4531436 8.3035063 10.6481384 11.0588822 11.2297625 2.9166486 4.1281449 9.0534969 12.2339344 NA 10.7371556 7.6771417 7.6287153 5.0949792 10.4651585 11.4677925 10.2893913 11.0166114 12.9311752 8.4185825 11.0807538 10.5587115 11.0118990 10.8451981 4.3966322 11.1017770 8.2980699 -0.3313362 10.7011034 9.0317530 3.0842004 6.7561760 10.6566878 9.9633340 10.6830825 10.1600653 5.0949792 9.1291691 12.0894630 11.1286571 9.3863898 9.6236366 0.221450 0.025952 0.299310 -0.094724 -0.331910 0.170910 0.000000 -0.051316 0.053948 0.053948 0.832940 -0.081605 1.235100 0.217760 0.046984 0.046984 -0.646590 0.014749 -0.058462 0.263880 -0.055903 -0.350880 0.147120 0.147120 -0.061250 -0.061250 -0.047395 0.205800 -0.061823 -0.037626 0.209320 -0.344690 -0.062226 -0.338390 0.170910 0.170910 0.000000 0.000000 -0.360660 0.716970 -0.348130 0.053948 -0.350240 -0.350240 0.141470 0.215450 -0.092742 1.041500 0.217760 0.046984 -0.061420 -0.071049 -0.646590 0.014749 -0.058193 -0.058462 -0.347560 -0.347560 -0.357830 -0.356350 -0.350880 0.147120 0.225300 -0.029994 -0.047395 0.205800 -0.336640 -0.066654 -0.679430 0.000 0.000 0.171 0.000 -0.271 0.000 0.000 -0.348 -0.339 0.899 -0.356 -0.204 0.147 0.225 0.225 0.000 0.000 0.000 0.000 0.206 0.206 -0.337 0.000 0.000 0.000 -0.104 -0.104 0.000 -0.270 0.171 0.171 0.000 0.000 0.369 -0.348 0.000 0.000 -0.350 -0.209 -0.156 -0.156 0.000 0.000 0.171 0.000 -0.271 0.000 0.000 -0.348 -0.339 0.899 -0.356 -0.204 0.147 0.225 0.225 0.000 0.000 0.000 0.000 0.206 0.206 -0.337 0.000 0.000 0.000 -0.104 -0.104 0.000 -0.270 0.171 0.171 0.000 0.000 0.369 -0.348 0.000 0.000 -0.350 -0.209 -0.156 -0.156 8.3375983 NA 5.5875750 10.1530327 11.9032314 6.9581792 10.6086598 9.0365756 8.9178622 -0.3313362 10.9410514 11.5161974 3.0610331 4.7561747 3.1281449 8.1444467 5.3125708 11.0759810 11.8495548 10.8031396 8.6869133 5.7021367 7.2611707 10.3233492 7.2499136 6.4500730 4.0610331 NA 11.0191000 7.3375978 7.3340489 8.2271341 9.5490621 10.2732619 10.3455518 5.2834218 8.4840966 NA 7.4402031 10.9815962 9.5251388 6.6287153 NA 7.9494842 7.3017084 4.8184620 2.4760706 NA 6.2233028 7.1516823 4.1605653 10.6883040 0.2536263 6.3691524 10.4924785 9.6416931 5.4631287 10.1520252 14.3888239 9.4800880 4.2834255 4.5016047 10.1358093 1.8386291 -1.3313362 -1.3313362 0.2536263 12.226822 6.949484 7.963334 12.292366 10.143433 10.072258 12.243662 11.875422 8.707632 9.928456 12.493274 9.700070 9.053497 8.180466 3.668709 8.015227 12.140134 11.2649030 11.7450278 6.9023329 12.8052999 8.4824946 7.1281449 8.9225606 9.3402543 10.6965501 8.4402027 9.1932550 9.8146454 8.5860854 -0.3313362 10.6484957 3.3125635 7.8580189 9.9142660 10.7445266 10.0765121 9.2574279 9.8423904 12.0631760 7.0907783 12.2284381 9.2242610 10.2541453 10.0284628 11.0596883 10.0024277 10.7195822 11.0559228 9.6016662 -0.3313362 10.0255778 6.3411389 12.2339344 6.0865651 10.7371556 5.8781662 10.8050636 10.4651585 8.0459240 12.5437906 10.2806602 10.1530327 12.5587875 10.1680609 3.6229069 2.2536868 10.7762573 10.0663879 10.2667658 TCGA-E9-A1R5 63 0 NA 92 breast stage ia t1c n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 2 2 2 2 1 5 1 4 3 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 3.121176e-07 31.25 18.75 6.25 18.75 25 10.68266494 10.52009876 10.94421109 9.93626367 9.35033480 9.34379532 8.60610128 9.27976424 9.50682585 12.30439085 10.75783108 10.29415731 0.97673022 13.38609139 4.34597822 8.53388918 4.69556517 8.62899226 6.35178378 12.77636357 0.71369581 13.20786580 4.32251948 9.61712213 11.08134342 5.82641120 -0.02326978 10.27749001 9.48849734 3.24976388 6.47924511 7.89957686 -0.02326978 4.19913835 9.28508359 10.40300936 10.52685014 11.01908806 9.97721423 11.35323186 0.97673022 8.72605531 14.64298714 9.30342871 9.18701004 12.41510335 12.87603863 4.32251948 4.91534402 9.18863286 11.20175122 -0.60823228 11.35087848 8.29113892 4.83472638 4.86751598 10.42967224 11.88300895 11.02613948 12.23442713 12.99755101 8.48717922 11.29716917 10.78631186 11.81568589 10.58469141 5.17314343 11.80196847 10.89262402 -1.60823228 10.30691463 9.57293437 2.64045897 4.62059814 10.79479420 10.62150228 10.17109108 10.33209575 2.39179521 7.33722583 11.83446651 11.20536294 9.94876713 8.52620852 1.57140000 1.61530000 0.00666530 -0.00220420 0.00444110 0.58620000 -0.00055444 -0.00055444 -0.66244000 -0.66244000 -0.68058000 0.00416320 0.00416320 -0.00429290 -0.00429290 -0.00429290 -0.00429290 -0.00429290 0.02637300 -0.11678000 0.01167900 -0.02096100 0.57773000 0.57773000 -0.00498440 -0.00498440 -0.00498440 0.57987000 -0.65803000 -0.65314000 -0.00152430 0.00666530 0.00444110 0.00444110 0.58620000 0.59890000 -0.01133500 -0.00055444 -0.00055444 0.00000000 0.00000000 -0.66244000 -0.02329200 -0.02329200 -0.02329200 -0.02329200 0.00416320 0.00416320 -0.00429290 -0.00429290 -0.00429290 -0.00429290 -0.00429290 -0.00429290 -0.00429290 0.00166420 -0.11678000 -0.11678000 0.01218100 -0.65557000 -0.02096100 0.57773000 -0.01532900 -0.00498440 -0.00498440 0.59458000 -0.01354000 0.00777830 0.00777830 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.476 -0.656 0.000 0.545 0.000 0.000 0.000 0.000 -0.658 1.609 0.580 0.580 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.586 0.586 0.000 0.000 0.000 0.000 -0.621 -0.621 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.117 0.000 0.476 -0.656 0.000 0.545 0.000 0.000 0.000 0.000 -0.658 1.609 0.580 0.580 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.586 0.586 0.000 0.000 0.000 0.000 -0.621 -0.621 0.000 0.000 0.000 0.000 9.05534020 4.94637061 4.00649552 10.53037395 12.14906797 6.99663166 11.47825013 8.79632779 8.15167011 1.56169272 10.43275672 10.93098461 1.56169272 3.03564150 2.47925643 8.72045701 3.19913835 9.75427389 11.41744085 11.67066714 9.62899207 0.71369581 7.86142381 9.51913161 5.09222013 7.06773873 3.91534880 NA 11.53580302 7.79052575 7.58160659 8.10258833 7.04999336 10.08159675 11.30560653 3.14667151 7.84710935 1.19912264 7.44434985 12.38356968 9.68812475 6.11288150 -1.60823228 7.69327855 9.08701034 2.39179521 2.63971838 NA 3.67718122 6.46624535 -0.02326978 9.85223798 NA 5.69556239 10.40370816 10.13703634 2.91534880 9.40370827 11.82901406 6.96542876 2.56171716 2.39179521 13.37842418 2.19912264 -1.60823228 0.97673022 0.71369581 12.7648097 5.1991384 9.0517780 13.3860914 10.1959131 11.7688571 12.7763636 12.4307011 9.2119610 10.6100426 13.8675156 10.2454815 9.1886329 9.1796847 0.7136958 8.2544197 11.5037328 10.8133211 11.1150165 9.1657454 12.8987702 8.3733494 3.8836306 8.2215050 8.7679077 9.7209337 4.9616372 5.8011742 10.7578311 5.1599682 2.1991226 11.3020501 4.3690616 5.7267250 10.7142737 10.3225195 10.5466003 8.6181942 8.0120021 12.4847870 4.1731434 12.2125624 10.5268501 10.0995727 9.7995810 12.6105724 9.4805703 9.7243783 10.5204210 9.5281325 NA 9.2270115 10.2135562 11.2017512 3.1466715 11.3508785 8.8604060 9.9608592 10.4296722 6.9463706 13.1075297 9.3683463 10.6257014 12.9756288 10.0681800 NA 0.7136958 9.8022335 10.6777623 10.6544643 TCGA-E9-A1R6 63 0 NA 339 breast stage iia t2 n0 m0 female 2010 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 2 5 3 1 1 1 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 38.0952380952381 14.2857142857143 4.76190476190476 28.5714285714286 14.2857142857143 8.4096442 9.7736756 11.5831768 8.7706655 8.8423745 8.3235354 10.2341456 9.0572109 9.4150522 13.7108756 9.3045142 10.3157091 -1.4544269 13.8126472 2.2458911 9.1820829 5.9717229 8.3235354 8.7862497 13.0265008 2.2458911 14.2149800 0.1304038 9.6550342 11.2652748 5.4761970 NA 9.0699999 8.6209375 -1.4544269 9.4387598 6.7153827 0.8674221 3.5898474 9.7365174 10.2045622 9.6760288 9.8343242 9.6175909 10.4780421 1.3528150 11.6637504 14.5945410 8.4949788 10.6014151 11.5261333 10.9829502 4.1893106 4.4523516 8.7203838 10.3362140 -1.4544269 10.3491858 5.5898534 4.4034382 4.1893106 9.3878086 11.4941905 10.3459537 10.7469696 12.4013000 8.5255979 10.9356272 9.1620071 10.9348207 10.8687945 4.7352839 10.8492389 11.7501822 -0.4546246 10.8543660 9.1453710 2.8688250 4.7153827 10.5695590 9.8215827 11.0940393 10.0012991 4.4523516 5.1000483 11.1541751 9.8713257 10.0699999 8.7969406 -0.09881400 -0.11694000 0.00000000 0.00000000 0.36395000 0.41396000 -0.12836000 -0.12836000 0.75757000 0.75757000 0.75757000 0.00652620 0.00652620 0.11038000 0.11038000 0.11038000 0.39512000 0.37808000 -0.42287000 -0.41300000 0.02567100 0.45871000 0.45871000 0.45871000 0.20509000 0.20509000 0.20509000 0.89387000 -0.09881400 -0.09881400 -0.08678400 0.00000000 0.38766000 0.37331000 0.41396000 0.41396000 -0.12836000 -0.12836000 -0.12836000 -0.01216200 -0.43094000 0.75757000 -0.46717000 -0.46717000 -0.46717000 -0.46717000 0.00652620 0.00652620 0.11038000 0.11038000 0.11038000 0.11038000 0.39512000 0.37808000 0.37808000 -0.41553000 -0.41300000 -0.41300000 0.02567100 -0.49722000 -0.39919000 0.45871000 0.51350000 0.18132000 0.20509000 -0.84419000 -0.00097017 -0.38627000 -0.38627000 0.000 0.000 0.110 0.110 0.395 0.395 -0.416 -0.413 0.000 0.657 -0.433 0.060 0.459 -0.818 -0.818 0.205 0.205 0.000 0.000 -0.061 0.894 0.000 -0.386 -0.103 -0.103 0.000 0.000 0.364 0.364 0.414 0.414 -0.128 -0.128 0.000 0.000 0.758 0.758 -0.467 -0.467 0.000 0.000 0.000 0.000 0.110 0.110 0.395 0.395 -0.416 -0.413 0.000 0.657 -0.433 0.060 0.459 -0.818 -0.818 0.205 0.205 0.000 0.000 -0.061 0.894 0.000 -0.386 -0.103 -0.103 0.000 0.000 0.364 0.364 0.414 0.414 -0.128 -0.128 0.000 0.000 0.758 0.758 -0.467 -0.467 0.000 0.000 8.7609913 NA 5.2036710 10.7754787 11.4040221 7.4008564 10.8169212 7.5045616 9.2066039 NA 10.8625882 11.2628412 4.0048879 1.7153663 3.3003434 7.8537973 3.4996546 9.7998963 11.4034392 9.9832102 8.9966692 1.8673825 7.4820964 9.8227456 5.6329196 1.1304038 1.1304038 NA 10.5854054 6.9334759 8.3300931 8.2337083 7.0962049 11.4463778 9.6977431 3.6747431 9.2045621 NA 7.0292740 11.6648857 9.3807191 7.6249431 NA 7.0089821 7.7910111 NA 2.2458911 0.1304038 2.3528150 6.1232647 1.7153663 10.9256487 NA 5.8583416 10.4334403 9.7228777 4.2178821 9.2936510 12.0994474 7.0532526 2.7933757 2.8673825 10.2385095 4.3003434 NA 4.4034382 1.5454742 14.220664 6.534143 9.356833 13.812647 9.318597 10.484670 13.026501 13.125717 8.953353 10.794275 11.894186 10.951663 8.720384 8.238945 NA 7.203670 11.813415 10.579569 11.530411 7.452349 12.746201 8.971713 3.069015 9.601419 9.426572 9.420893 6.259704 8.525598 9.304514 7.381508 -1.454427 9.569905 5.415823 7.008533 10.884752 9.368029 9.949535 9.827388 9.158327 12.520321 3.452345 11.518608 9.676029 10.111036 10.325178 13.223013 8.942063 10.081705 10.165678 9.224058 NA 8.912032 5.622274 10.336214 3.189319 10.349186 7.403439 10.387416 9.387809 6.788632 12.932062 10.411578 10.077327 12.228892 10.257985 NA NA 9.812830 9.660502 9.263135 TCGA-E9-A1R7 64 0 NA 1467 breast stage iia t2 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 2 2 3 1 1 5 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.81477e-07 10.4166666666667 29.1666666666667 4.16666666666667 31.25 25 11.291363 10.988449 11.484970 10.763973 9.072409 9.695829 10.924069 9.684153 8.850645 13.608991 11.487624 10.548715 2.952520 12.955468 5.107805 7.577902 4.515460 8.803706 11.708323 13.435608 4.300446 13.797266 2.580556 8.556488 12.718000 7.453095 NA 8.708626 9.553114 1.952520 7.107803 7.729107 -1.506763 4.470374 9.711657 10.665208 9.712262 9.099499 10.885143 11.752543 1.663026 11.619475 13.920832 9.714276 10.900892 10.932405 12.699268 5.136950 5.000888 9.704982 10.463918 NA 10.819804 10.636796 3.300446 3.622380 11.036850 12.157541 10.632325 11.260864 13.174551 8.994931 11.366538 10.730486 11.654698 10.814740 5.876797 13.447335 9.458156 NA 9.699497 9.979426 1.666211 3.815022 9.662392 10.818399 10.051514 10.872472 7.277728 4.702547 11.398104 9.673002 10.320039 9.212482 0.4837200 1.9801000 0.0211830 0.0031910 0.0155870 0.3565900 0.5114100 -0.0612860 -0.5890200 -0.5850000 0.5484100 0.0058309 -0.5826900 -0.5609700 -0.0078863 0.0465590 -0.0065050 -0.0065050 0.0090312 0.0239870 -0.0757450 -0.5824500 0.5410100 0.5410100 -0.0069195 -0.5753600 -0.5753600 3.6569000 -0.5784200 -0.5805800 -0.0134020 -0.5838200 0.0150280 0.0155870 0.0280600 0.0000000 -0.0690640 -0.6277900 0.5115900 0.2634100 -0.2557600 -0.5890200 -0.5829400 -0.5829400 -0.2706900 -0.2875000 -0.5826900 -0.5843800 0.0258120 -0.6048700 -0.5898100 -0.5568700 -0.0065050 -0.0065050 -0.0065050 0.0090312 -0.5808800 -0.5900000 -0.0757450 -0.5529600 -0.5824500 0.5410100 -0.0151910 0.4938900 -0.5753600 -0.6202600 0.2579300 0.0248290 0.0185230 0.000 0.000 0.000 -0.590 0.000 0.000 0.000 0.000 0.000 0.499 -0.553 -0.582 0.541 0.000 0.000 0.000 -0.568 0.000 0.236 0.000 0.000 0.258 0.000 0.000 0.000 0.000 0.000 -0.586 0.000 0.357 0.000 0.000 0.000 0.008 -0.256 -0.577 -0.028 -0.583 -0.271 0.000 0.000 0.000 0.000 0.000 -0.590 0.000 0.000 0.000 0.000 0.000 0.499 -0.553 -0.582 0.541 0.000 0.000 0.000 -0.568 0.000 0.236 0.000 0.000 0.258 0.000 0.000 0.000 0.000 0.000 -0.586 0.000 0.357 0.000 0.000 0.000 0.008 -0.256 -0.577 -0.028 -0.583 -0.271 0.000 0.000 7.88969803 6.70254673 2.88541818 9.04191536 12.32963698 6.06469535 11.06223702 8.00379841 7.81738663 0.49313492 13.35194866 10.73645191 3.24798826 6.28750923 1.07806326 8.31486734 2.30044591 8.30687466 11.26808637 11.73864617 8.66552104 0.07806326 7.79000957 9.34951899 5.74102197 5.24798066 5.27445177 NA 10.33387138 6.88969864 8.98894849 8.25962229 7.35107439 8.73242931 10.42420031 2.30044591 6.82401042 NA 6.31964142 12.81283612 8.33858353 5.49309328 NA 9.07523552 10.34874066 NA 4.55917975 0.81500152 4.35107704 5.32990215 1.07806326 9.68106408 NA 7.78771389 10.68446119 10.02203582 3.62237987 8.36037218 11.85982547 6.88969864 7.23456072 1.95251995 13.68334253 -0.50696758 NA 5.28750923 -1.50676258 14.233550 6.906721 9.127905 12.955468 10.492036 11.844309 13.435608 13.891370 9.542261 11.082276 12.473590 8.772704 9.704982 9.645378 NA 8.646645 13.438309 10.680755 12.850920 6.470374 13.074116 8.478935 3.984945 9.329144 9.898081 10.223721 3.493096 8.756363 11.487624 5.423830 -1.506763 10.570911 6.381837 7.987409 10.015675 11.036850 10.800294 7.078056 8.064846 12.427706 5.363458 11.377304 9.712262 9.750481 8.972874 14.043149 8.845137 10.265820 10.402236 9.692766 1.078063 8.199624 5.874551 10.463918 4.741019 10.819804 6.179595 9.559183 11.036850 8.028369 12.865006 9.523071 9.667395 12.091495 10.133338 NA NA 10.492741 10.829879 9.964261 TCGA-E9-A1RA 48 0 NA 1369 breast stage ia t1c n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 5 4 3 4 4 5 2 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 2.774378e-07 20 30 5 15 30 10.79967495 9.88116292 11.71512662 9.01519201 7.74293927 8.55887450 9.97053116 8.85866021 10.33422914 12.78252088 11.14713546 10.45334431 5.27076813 12.64877226 4.33947949 10.06929925 7.74610648 8.15400744 10.37571847 12.70529476 3.23514496 13.87733144 7.31409558 9.34684345 10.49817875 6.70763246 0.49814873 8.93973964 10.82872217 3.30553283 8.46203800 7.02174066 -0.08681377 3.08314527 9.82310925 10.19456678 9.70437920 11.22183969 9.98333724 11.67227218 3.55706693 10.99968424 14.90190092 8.25564660 9.95006986 11.22297677 10.78858164 4.55707306 1.91322453 9.01124822 11.32842984 NA 11.44215866 4.37264570 6.47545945 5.06296356 10.02630723 12.17001463 10.43971548 12.74640282 12.53458133 7.22155522 11.29313605 10.70390686 10.54348332 11.26360295 5.40506996 12.46396302 11.29448876 2.23514496 10.57855214 9.41106815 4.04661329 4.52792734 11.16824482 9.99270103 10.19398705 9.93766336 1.23511432 10.08751774 12.69672609 11.33317643 10.15936303 9.25640190 0.4832000 0.4832000 0.0272160 0.0272160 -0.2409500 -0.0002391 -0.2488500 -0.2488500 0.2186800 0.2186800 0.2186800 0.0079175 0.0079175 -0.0537460 -0.0537460 -0.0537460 0.0190830 0.0190830 -0.2714100 0.0131070 0.2009100 -0.2642000 -0.2642000 -0.2642000 0.1596500 0.1596500 0.1596500 0.2429500 -0.0479360 -0.0479360 -0.2285900 0.0272160 -0.2409500 -0.2409500 0.0252500 0.0252500 -0.2488500 -0.2488500 -0.2488500 0.2862800 0.2819300 0.2186800 -0.0469890 -0.0469890 -0.0469890 -0.0469890 0.0079175 0.0079175 -0.0537460 -0.0537460 -0.0537460 -0.0537460 0.0190830 0.0000000 0.0000000 -0.2422900 0.0131070 0.0131070 0.2009100 -0.2788200 -0.2642000 -0.2642000 0.2336500 0.1596500 0.1596500 0.2429500 -0.2613100 -0.2771500 -0.2771500 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 0.000 0.201 0.245 -0.034 -0.264 -0.264 0.218 0.218 0.160 0.160 0.000 0.483 0.243 0.243 -0.261 -0.277 -0.237 -0.237 0.000 0.000 -0.241 -0.241 0.000 0.000 -0.249 -0.249 0.282 0.282 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.242 0.000 0.201 0.245 -0.034 -0.264 -0.264 0.218 0.218 0.160 0.160 0.000 0.483 0.243 0.243 -0.261 -0.277 -0.237 -0.237 0.000 0.000 -0.241 -0.241 0.000 0.000 -0.249 -0.249 0.282 0.282 0.219 0.219 0.000 0.000 0.000 0.000 8.08814213 7.12753527 4.79586044 10.92828274 11.38996243 7.38285830 11.30955343 8.46311644 8.61162573 0.49814873 12.15341130 11.29559441 1.72058492 0.91318623 4.79586044 8.54074994 2.82009725 10.02891014 11.15460359 10.73059963 9.21585523 7.17531102 8.24413308 10.50286740 6.13238559 6.11288775 1.72058492 NA 10.97762217 3.66810778 7.54984087 8.63431555 6.01124739 10.80591086 10.73299616 3.91321495 8.89192675 4.46780768 8.34366898 12.82423363 9.43873697 7.16588180 -0.08681377 1.49819980 8.15876872 NA 2.91322453 NA 5.18000460 5.11190768 3.37264570 10.84099423 NA 7.33106831 10.41007001 9.96102174 4.79586044 8.99536523 11.57254321 7.56426765 3.37264570 3.66810778 11.09156986 2.72056304 -1.08681377 -0.08681377 2.61364952 13.569261 6.296920 8.458181 12.648772 9.877557 11.054685 12.705295 12.275023 8.984678 10.716944 13.795859 10.934196 9.011248 9.508474 4.000676 6.771198 11.722582 11.1387250 12.3583604 7.6274617 13.5439373 9.1599568 5.8557306 9.0424993 8.0730876 10.6413408 6.8019592 8.6978509 11.1471355 6.0112474 0.4981487 11.1459369 7.3352814 7.5691759 11.8287222 10.2718674 10.6106182 8.8461692 8.9480153 12.1450374 5.8320799 12.0742457 9.7043792 10.4925322 9.8387706 10.9348903 10.4140581 8.8904962 10.6205753 9.2663630 NA 9.6954446 7.3310683 11.3284298 6.1420356 11.4421587 7.2575123 10.3145491 10.0263072 7.5534611 14.5468643 10.0151919 9.9521352 12.5091730 11.0956106 3.5570669 NA 10.0974717 10.5812148 9.8601225 TCGA-E9-A1RB 40 1 976 NA breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 1 1 2 4 2 2 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 5.895554e-07 3.121176e-07 21.4285714285714 14.2857142857143 3.57142857142857 50 10.7142857142857 10.37423888 8.82143375 12.14394258 9.15146945 8.86876639 8.90523205 9.22041219 10.05174513 9.81603132 12.31978018 11.39626729 10.51887107 1.05741561 10.97811667 2.22730980 9.54523170 4.56518892 8.34394962 10.06301616 12.73846532 1.05741561 13.13958229 4.46678371 9.19052103 11.44163577 4.51682202 0.05741561 8.74126338 11.96765961 1.05741561 6.20204936 7.82392064 NA 1.86473092 9.63009181 10.91731464 9.59023466 10.15113936 9.05174513 11.20443757 2.86475073 10.88135589 14.12053391 7.49599649 8.95976668 10.95088282 10.34192661 4.30532124 -0.94258439 9.27716533 12.22355474 -1.94286170 11.04181012 5.28621212 5.99402978 5.58877459 8.05174513 12.21860228 9.93544251 11.63741462 12.63835681 7.31948607 11.00740072 10.54178914 10.71493338 11.47563961 4.85180900 12.52531557 8.39612823 -0.35771432 10.48627523 10.52703348 2.52140257 5.19694140 11.31581046 10.06336704 10.37875610 10.19470306 10.17535942 7.84692513 12.22551532 11.58816373 10.59606561 9.36288341 1.0655000 1.0928000 0.2361200 0.3698600 0.4481600 1.1510000 -0.4613100 -0.4229800 1.8190000 0.9958700 1.0646000 0.2962100 -0.1177000 0.2788400 0.2788400 0.2788400 0.4059400 0.4059400 -0.3452700 0.3004200 -0.1072900 -0.4958000 -0.4655700 0.0642250 0.0093098 -0.1225200 -0.1225200 0.3201200 0.0997240 -0.2202200 -0.4352800 0.2361200 -0.5159900 -0.4183800 -0.4350700 -0.4171800 -0.4613100 -0.4229800 -0.4229800 0.1296400 0.2229900 0.1828300 -0.4559700 -0.4559700 -0.4559700 0.6235100 -0.9846300 0.1716600 0.2085500 0.2788400 0.2788400 0.2551100 0.4059400 0.4059400 0.3510400 -1.1804000 -0.4201400 -0.4201400 -0.0932710 -0.5502500 -0.4958000 -0.4655700 -0.0611520 -0.5257300 -0.1225200 0.3201200 -0.4189300 -0.0773450 0.1887400 0.244 0.244 0.279 0.279 0.406 0.406 -0.345 -0.420 0.000 0.565 -0.456 -0.496 0.000 0.000 0.000 0.000 -0.123 0.196 1.065 0.320 0.320 -0.419 -0.509 -0.406 -0.406 0.384 0.384 -0.418 -0.418 0.759 -0.392 -0.423 -0.423 0.189 0.189 1.086 1.086 -0.392 0.000 0.000 0.000 0.244 0.244 0.279 0.279 0.406 0.406 -0.345 -0.420 0.000 0.565 -0.456 -0.496 0.000 0.000 0.000 0.000 -0.123 0.196 1.065 0.320 0.320 -0.419 -0.509 -0.406 -0.406 0.384 0.384 -0.418 -0.418 0.759 -0.392 -0.423 -0.423 0.189 0.189 1.086 1.086 -0.392 0.000 0.000 0.000 8.42043145 NA 6.79885928 10.36402300 12.01104250 5.86789893 10.63788579 8.11943763 7.89928622 NA 11.64153208 11.55070047 3.41494733 0.64237811 0.86473092 8.36231339 3.54925022 9.54221451 11.75251119 11.53717194 9.34047993 4.34279650 8.92235159 9.93006654 5.09081533 6.02893597 3.34279650 -0.94258439 10.98646512 3.51682202 6.70484984 8.66287128 5.84529433 9.41242885 10.90072389 0.64237811 8.72005987 -0.35771432 6.48365619 12.08874826 7.81227937 6.34741054 0.05741561 8.03610216 8.13820933 1.37934371 1.64233190 -1.94286170 3.78530991 2.70123853 0.64237811 12.17852042 -0.35771432 9.34394940 10.24350593 10.38914839 3.01158509 8.94232536 11.71950369 7.56121767 2.58096551 3.78530991 10.71694170 2.91536792 3.10178452 1.37934371 2.70123853 12.160188 8.397242 9.157397 10.978117 9.658234 12.003201 12.738465 11.996144 9.375935 10.908945 12.977512 11.741592 9.277165 8.686748 2.812272 7.867963 11.163464 11.60861929 11.17341068 7.28621027 13.68118687 8.79040715 4.65730273 9.45506620 9.72274982 10.92160101 5.44109500 6.79885928 11.39626729 9.05739178 0.05741561 10.10894048 6.30531941 9.20661173 11.16836424 10.90033121 10.45185431 8.41164106 8.99697083 11.75750623 3.58095346 12.58781079 9.59023466 10.24659846 10.30324146 10.51220506 9.44379311 10.52014956 11.41631752 9.31654651 -0.94258439 9.56351567 7.21978323 12.22355474 3.51682202 11.04181012 9.12751257 11.07237978 8.05174513 7.48784405 14.00616953 10.97140301 10.83608484 12.38571597 10.47603491 NA NA 10.26043373 9.81603132 10.15080919 TCGA-E9-A1RC 56 0 NA 1224 breast stage iiic t4b n3 m0 female 2007 NA no mixed histology (please specify) 10 white not hispanic or latino NA NA 1 2 5 2 4 1 1 5 1 3 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-06 4.161568e-07 28.5714285714286 11.9047619047619 4.76190476190476 26.1904761904762 28.5714285714286 10.8874835 10.0363099 11.6355130 10.2593836 8.7500557 9.4773487 9.7121653 8.7274410 9.1132718 14.2699273 11.0215831 11.1881767 5.6032139 12.4772859 4.3104346 9.7628796 7.3081761 8.7001713 10.9199806 12.9987265 5.4803588 13.9812657 5.4803588 9.5167338 11.6382096 8.8886163 2.9885029 10.0898235 11.8034873 3.4147715 8.0812613 7.0839016 -2.0115880 5.8526905 10.3917828 10.9313854 10.2919997 9.8650213 10.0986614 11.3045030 0.5734715 11.5954878 14.3784213 8.2074068 8.6142133 11.5132909 11.5488372 4.7566871 2.6889412 9.4510066 11.6019485 NA 10.7554473 2.8464933 4.3460563 5.1074452 7.9295519 11.9833881 11.4121455 12.9524841 13.0728145 8.0108721 11.0101784 10.6333250 11.4189569 11.1437970 5.4642370 11.4610683 10.1653008 -2.0115880 10.3765217 9.9073677 4.6036560 3.6889412 11.0698214 10.1596812 10.2167219 10.6155822 NA 5.6819917 12.6308382 9.3222189 10.6050532 9.0699878 1.8640000 1.8387000 0.4067800 0.3861800 0.3546300 0.4407100 -0.0638380 -0.0903610 1.4191000 1.4191000 1.4110000 -0.1042100 -0.1042100 -0.0904930 -0.0904930 -0.0904930 0.3996100 0.4184800 -0.0769450 0.8437600 0.4684400 -0.0049366 -0.0049366 -0.0049366 -0.4932900 0.0127950 0.0127950 0.9986200 -0.5748600 -0.6247900 -0.0940640 0.4171400 0.5315100 0.3111300 -0.6140300 -0.1454100 -0.0638380 -0.0903610 -0.0650450 0.4002100 -0.6145100 1.4191000 -0.1231700 -0.1231700 -0.1231700 0.0297470 -0.1042100 -0.1042100 -0.0904930 -0.0904930 -0.0904930 -0.0988140 0.3996100 0.4184800 0.4742200 -1.1449000 0.4394600 0.4394600 -0.6207300 -0.0721400 0.0000000 -0.0049366 -0.0898310 -0.4932900 0.0127950 0.9791800 -0.0708040 -0.5681300 -0.5681300 -0.104 -0.104 0.000 0.000 0.400 0.400 0.000 0.439 -0.621 2.428 2.428 0.000 0.000 0.000 0.000 -0.493 0.000 1.264 1.839 0.979 0.979 0.000 -0.568 0.000 0.000 0.417 0.417 0.307 0.307 0.397 0.397 0.000 0.000 0.153 -0.247 1.355 1.355 -0.123 -0.123 0.190 0.190 -0.104 -0.104 0.000 0.000 0.400 0.400 0.000 0.439 -0.621 2.428 2.428 0.000 0.000 0.000 0.000 -0.493 0.000 1.264 1.839 0.979 0.979 0.000 -0.568 0.000 0.000 0.417 0.417 0.307 0.307 0.397 0.397 0.000 0.000 0.153 -0.247 1.355 1.355 -0.123 -0.123 0.190 0.190 8.5071576 5.9714976 7.1634303 10.3944435 11.2964167 7.1635299 11.5790914 7.7765699 7.6303574 -1.0115880 11.9914951 11.2051214 1.7958500 2.9885029 2.4479230 8.4753395 2.5734715 8.9600480 11.2841298 11.4765955 9.2905721 6.1280562 8.0464960 9.4581461 4.4803556 4.8711487 2.9427022 -1.0115880 11.4953078 6.4923307 5.6609286 8.1596812 10.0042678 10.0224436 10.7700690 0.3104565 8.1177875 -2.0115880 7.7164251 11.8316403 8.8742006 6.2692744 -1.0115880 7.4561096 8.3915164 2.9427022 2.8464933 -2.0115880 0.3104565 5.4849179 1.3104565 10.7223671 NA 5.8277073 10.1420564 10.2971278 5.2269092 8.8757251 11.4417750 6.6854721 2.6889412 2.5734715 12.3500370 3.6032168 NA 3.9427022 2.9427022 11.664113 7.296844 8.590275 12.477286 9.952845 11.595141 12.998726 12.048525 8.891550 11.382833 13.524509 10.263174 9.451007 9.284847 -1.011588 7.310433 12.502725 11.0545935 12.2692026 8.1203613 13.0646916 8.6750050 2.8464933 10.1058228 9.4173880 10.4914207 4.1177865 8.8046880 11.0215831 7.3013874 1.8953802 12.3303706 5.3635426 8.6121483 12.0339228 10.7990760 11.2407263 9.5373264 8.2304874 11.9992073 0.9884847 12.7308143 10.2919997 10.4402306 9.3624570 11.8770574 9.7450606 9.9849779 10.8130654 9.1832612 4.0328943 9.0509013 6.8462676 11.6019485 0.3104565 10.7554473 8.3294672 10.1646776 7.9295519 7.8665705 13.3619473 9.6210452 10.2736175 13.1081750 9.9955316 -1.0115880 2.1210817 10.1863354 11.0103519 9.8703831 TCGA-E9-A1RD 67 0 NA 34 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 1 2 2 4 1 3 8 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 1.387189e-07 23.8095238095238 38.0952380952381 4.76190476190476 28.5714285714286 4.76190476190476 11.2643815 10.3787789 11.9220715 9.5723296 8.5462547 9.8798517 10.5757385 9.6235777 8.7556811 13.8351914 10.2358848 10.7288114 1.9483392 12.6140175 3.5008658 8.9669902 6.7795276 8.5008674 9.9282754 13.5873956 2.1272040 13.9984697 6.4885182 9.7621074 10.7702066 7.7979922 -0.9584766 10.6240834 11.7473920 1.2113861 7.4823046 6.5728169 NA 4.8994173 10.3787789 10.2505844 11.3830935 10.9436223 10.2732569 11.6532674 5.2213435 11.3268379 13.5176756 9.5141315 9.2780240 11.9936309 11.4091234 4.4843766 7.1021321 9.0871952 12.2803628 -0.3735141 11.4530791 3.9956292 5.7487940 3.0414357 10.5637720 12.3036040 10.9430568 11.9838585 13.0329132 7.4487036 11.3000017 11.0420537 11.3943067 11.1322097 5.0526637 11.8793592 9.1636165 -1.9584766 10.1075249 9.0967181 3.9780766 5.6852926 10.6345934 9.7595404 9.8959145 9.4310669 2.2893623 10.4463111 12.6776638 11.4396450 10.7479317 9.2690516 0.9019000 0.9071400 0.0046776 0.0046776 -0.0123000 0.4602400 -0.0019399 -0.0019399 0.0013868 0.0013868 -0.0058140 0.0066653 0.0058461 -0.0013858 -0.0013858 -0.0013858 0.0000000 0.0000000 -0.4665300 0.0081959 -0.0033243 -0.0074720 -0.0074720 -0.0074720 0.3820400 0.3820400 0.3820400 0.0267950 0.0024969 -0.0033613 -0.0037395 0.0046776 -0.0123000 -0.0105080 0.4602400 0.4602400 -0.0019399 -0.0019399 -0.0019399 -0.0029091 -0.0029091 0.0013868 0.0033299 0.0033299 0.0033299 0.0033299 0.0058461 0.0130740 -0.0013858 -0.0013858 -0.0013858 -0.0013858 0.0000000 0.0000000 0.0000000 -0.4665300 0.0081959 0.0081959 -0.0033243 -0.4776500 -0.0074720 -0.0074720 0.4725500 0.3820400 0.3820400 0.0249690 0.4287300 -0.4730000 -0.4704600 0.000 0.000 0.000 0.000 0.000 0.000 -0.467 0.000 0.000 0.475 -0.478 0.000 0.000 0.464 0.464 0.382 0.382 0.000 0.902 0.000 0.000 0.429 -0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.467 0.000 0.000 0.475 -0.478 0.000 0.000 0.464 0.464 0.382 0.382 0.000 0.902 0.000 0.000 0.429 -0.473 0.000 0.000 0.000 0.000 0.000 0.000 0.460 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.76167987 -0.95847664 6.99272085 9.92063601 11.12939572 7.25281301 10.86241241 8.65617313 8.99515207 -1.95847664 11.93198497 11.34527777 2.62639241 3.04143575 3.62639241 8.91025836 3.97216878 10.45400558 11.40502294 11.06605595 9.45664929 4.99563376 8.39788765 9.81869097 5.77614611 1.94833920 0.04138318 -1.95847664 11.00053204 6.61886412 7.21636173 8.03861506 6.16555624 9.70543852 11.08052610 4.32683932 7.79799217 NA 8.27984037 11.88280347 9.57525200 7.19625392 -0.37351414 6.81292558 8.80049162 2.50087852 4.61129044 -0.37351414 3.43374733 6.65002349 0.36333931 9.68574256 0.36333931 7.33835221 10.59602451 9.86758686 4.96029855 10.17714493 13.47097319 7.52323496 2.94832050 2.74187682 13.58857121 3.21135491 -1.95847664 0.84879818 0.04138318 13.0618080 5.8029867 8.9445645 12.6140175 9.9180907 11.3814248 13.5873956 12.5381022 9.2312603 10.7029911 13.2165954 8.3790577 9.0871952 7.5960242 0.3633393 7.6942806 11.5978220 10.81106693 11.38878020 7.67624695 13.73967831 9.07348153 4.30822252 8.98834186 8.71562812 10.14832252 6.25575564 8.39126980 10.23588475 6.13419218 2.89940768 11.23048806 3.71386075 7.16793391 10.21010779 10.17938739 11.01871560 8.70373923 7.81786880 12.32589835 4.72793679 11.95071846 11.38309350 10.80837861 9.78332388 11.32380019 9.46192222 10.41647508 10.96513456 9.43857543 -1.95847664 9.47424377 6.95066903 12.28036284 4.68528984 11.45307907 6.89630455 10.53279529 10.56377200 7.22134448 13.58528223 10.54252650 10.59146092 12.93847753 9.73492262 NA 0.04138318 10.56131764 10.86041722 9.99672232 TCGA-E9-A1RE 74 0 NA 1419 breast stage iiia t2 n2 m0 female 2011 NA yes infiltrating ductal carcinoma 9 white not hispanic or latino NA NA 1 2 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-06 2.427581e-07 28.9473684210526 15.7894736842105 5.26315789473684 31.5789473684211 18.4210526315789 10.8703162 10.1452172 11.5109222 9.6090343 9.0072678 8.2629226 10.0444068 9.5241291 8.2806246 13.5594881 10.9010130 10.7593658 1.3925372 13.5196208 3.7144873 8.1459602 5.8075945 9.4705605 10.1948947 13.6658031 4.8075971 13.3686048 0.2226809 9.2377621 12.5795662 8.3167105 -0.1924802 6.1235007 10.2307113 1.9230731 9.2184000 6.4800211 1.0299829 3.6489026 9.9156842 10.4562526 9.8038334 9.7412860 9.6462741 11.5559280 1.0299829 11.6043110 13.8724504 10.1443326 9.9415895 11.5438564 11.8091209 3.7772198 5.0039934 8.9230725 10.4835524 0.5445843 10.3650591 9.1927389 5.0681248 3.5801817 10.5708078 11.8582376 9.8290382 11.0663577 12.3585025 7.2560558 10.9076006 10.4480362 10.8578975 10.6512548 5.0428107 10.6588239 11.8926252 NA 10.1250080 10.5660962 3.2740081 3.7772198 10.6820645 10.6488976 10.4451260 11.5254146 2.2226191 8.1459602 11.4443710 9.5697005 9.8999121 8.3634628 0.0114000 0.0155870 0.0094491 -0.5469300 1.1236000 -0.0105080 0.4628000 -0.5213300 1.4101000 3.4885000 3.5983000 0.0180590 0.0180590 0.4980500 0.5633000 -0.5292000 0.0228650 -0.0044312 -0.0029091 0.4918200 -0.5213800 0.5615200 0.5615200 0.5615200 0.0850760 0.0349590 0.0732580 1.0354000 -0.4889000 0.0114000 -0.4779700 0.0127950 0.5510700 1.3769000 -0.0128510 -0.0128510 0.0220240 -0.5567400 -0.0027707 -0.5461300 0.0030522 -0.5277700 -1.2929000 -0.5135200 0.0375890 0.0435820 0.0180590 0.0255310 0.4980500 0.5633000 -0.5338800 0.5218800 0.0228650 -0.5053600 0.0308730 -0.0040162 0.5276600 1.0020000 -0.4965300 -0.4988200 -0.4836500 0.5615200 0.0000000 0.0850760 0.0732580 -0.4792300 0.5206600 -0.4564000 -0.4835500 0.000 0.000 0.485 0.000 0.000 0.000 0.000 0.528 -0.521 0.037 -0.505 -0.479 0.082 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 0.506 0.521 -0.484 -0.480 -0.480 0.000 0.000 0.551 0.551 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 3.657 -1.102 0.000 0.000 0.000 0.000 0.000 0.485 0.000 0.000 0.000 0.000 0.528 -0.521 0.037 -0.505 -0.479 0.082 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 0.506 0.521 -0.484 -0.480 -0.480 0.000 0.000 0.551 0.551 0.000 0.000 0.000 0.000 0.000 0.000 -0.528 3.657 -1.102 0.000 0.000 0.000 8.0475918 -1.7774427 4.6655747 9.7034231 11.4140006 7.5073879 9.8141553 8.9099387 8.6443715 1.3925372 10.7014026 12.0944140 5.1884168 1.8076022 1.5445843 8.0852701 3.7461945 8.3034506 11.4525032 10.0979983 8.8736846 1.0299829 8.0991500 10.0806138 5.6902383 6.3774518 -0.7774427 -1.7774427 10.6940541 9.3544898 9.0031727 8.9385948 6.3975583 10.9413027 9.9450136 0.5445843 8.3685650 NA 6.2394420 11.7839208 8.4987575 6.9974200 NA 6.5669293 8.4658068 NA 5.0929981 -0.1924802 4.3723810 6.4891383 2.3101074 10.3994294 -1.7774427 5.6488968 10.2920827 9.3831347 3.3519110 9.1437299 11.4059581 6.5976727 1.8076022 2.9775181 11.6216437 3.8664926 NA -0.7774427 1.0299829 13.669951 4.936878 9.993710 13.519621 9.964942 10.791302 13.665803 12.655305 8.715037 10.870316 12.130744 11.111566 8.923073 7.728444 1.222619 7.508035 11.626178 10.8132200 13.0085451 5.8808447 13.6920827 8.9916443 5.1999118 9.5680382 9.7901137 10.9517395 5.5264132 9.4106036 10.9010130 4.9091346 -1.7774427 11.0918412 3.8373378 7.7603946 13.0120137 9.5774332 11.7616705 9.8056686 10.1691737 11.7596086 6.0555232 12.9636980 9.8038334 10.9237227 10.4363447 12.4528785 9.3761849 10.2940953 10.6779601 9.2649762 NA 8.6754299 5.7822015 10.4835524 6.1355226 10.3650591 7.3337690 10.4405361 10.5708078 7.0681226 13.4914673 10.1735532 9.9674668 11.7095936 10.0610490 -0.1924802 0.5445843 10.5218409 11.1199111 10.2049134 TCGA-E9-A1RF 68 0 NA 200 breast stage iiia t2 n2 m0 female 2011 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino NA NA 1 2 6 2 2 2 1 9 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.570457e-06 6.146745e-07 13.4453781512605 19.327731092437 0.840336134453782 50.4201680672269 15.9663865546218 9.87232351 9.46183220 11.81798692 9.68222810 9.47434721 9.40049246 9.44002074 9.92949292 10.52100518 13.15294905 10.15829145 10.78710829 0.44921799 13.44095093 3.25655782 9.23874125 5.60907824 7.99417182 8.27893028 12.57736314 NA 14.62261154 0.77112495 10.04708791 11.04539744 8.98933574 2.53667462 10.56845685 10.94256281 2.25655782 6.92088279 7.07856394 -1.55088768 4.57849195 9.44850311 10.46078433 8.97374931 10.35872581 9.31339371 10.56294986 0.03421572 10.27098170 15.16104937 8.97272051 10.30485484 10.09531631 10.49735389 4.35610154 4.69713438 8.53268709 10.54196478 NA 10.50889012 5.94905395 6.61411498 5.07856287 10.45131941 12.26348970 10.69654187 11.91923098 12.66466483 8.59386578 10.75697773 10.10342748 10.99610214 10.61254289 5.03417169 11.52050240 10.47642260 -1.55088768 10.60781733 8.93503684 3.77546148 5.66837729 9.46740788 10.45728606 10.75982046 9.85806805 0.77112495 6.58363341 12.68686577 11.35346594 10.40049235 9.40413101 0.5208300 0.8952700 0.3530000 -0.1179600 0.0269350 -0.0066432 0.1288900 3.6569000 -0.3725600 0.3605100 -0.0092666 -0.0024938 -0.3665800 0.2991500 0.1010300 -0.3582900 -0.0138150 0.3562600 0.6950300 1.1167000 3.1505000 -0.3386000 0.1665500 1.5985000 -0.0736210 -0.0171160 0.3301100 0.9942600 -0.4153100 -0.0058140 -0.0801410 -0.0194520 0.0269350 -0.3613600 -0.0066432 -0.0066432 0.1288900 -0.4831300 -0.3730200 0.4505400 -0.3790900 -0.7672300 -0.3626100 -0.3626100 0.3660800 -0.0045695 -0.3665800 -0.3592000 -0.3698600 0.1010300 -0.7491600 -0.3365300 -0.0138150 0.4089400 0.4265400 0.4362900 0.2409200 0.2908800 -0.3807800 0.0454240 -0.6849700 -0.3614700 -0.3471000 -0.0736210 -0.0993410 0.9810600 -0.0149160 -0.3922700 -0.4055000 -0.367 -0.367 -0.358 -0.358 0.000 0.000 0.436 0.291 -0.381 0.000 0.000 -0.339 -0.339 -0.347 -0.347 0.000 0.000 0.000 0.566 0.994 0.994 0.000 -0.367 0.338 0.000 1.288 1.288 0.000 0.000 0.000 0.000 0.129 0.000 -0.254 -0.254 -0.373 0.000 -0.358 0.000 0.000 0.000 -0.367 -0.367 -0.358 -0.358 0.000 0.000 0.436 0.291 -0.381 0.000 0.000 -0.339 -0.339 -0.347 -0.347 0.000 0.000 0.000 0.566 0.994 0.994 0.000 -0.367 0.338 0.000 1.288 1.288 0.000 0.000 0.000 0.000 0.129 0.000 -0.254 -0.254 -0.373 0.000 -0.358 0.000 0.000 0.000 9.8193501 6.7065955 4.6586628 10.1673124 13.3383313 7.2362285 10.3821606 8.8212673 9.5795852 NA 12.9206924 12.2365205 3.6191313 1.0341453 2.8415304 8.2107590 4.4264862 11.9801017 11.2820977 10.6442723 8.9854549 0.4492180 8.6732094 10.3398519 6.5887596 6.7620910 3.6971399 NA 10.3617229 3.6971399 6.0037956 8.2836787 6.2305681 9.7744682 10.4687984 4.5152961 9.4527256 -1.5508877 7.3318503 13.1183142 8.3440255 7.1872996 -0.5508877 5.7979364 8.3364285 1.7711250 3.7711355 -1.5508877 6.5366700 6.2192440 2.7711461 10.6947603 1.2565880 7.5577325 10.9257008 10.3795754 5.8585977 9.3530895 13.3468168 8.6065547 5.1496455 4.2305643 10.5350121 2.7711461 -1.5508877 NA 0.4492180 12.092681 6.368072 8.811151 13.440951 10.990546 10.851953 12.577363 14.714896 8.541965 10.665044 13.517524 10.009063 8.532687 9.664134 -1.550888 8.444975 11.150514 10.84928655 12.36349937 7.94106052 13.77292991 8.99417210 6.90453468 9.06023252 7.58363416 10.54517165 7.18729961 7.47987482 10.15829145 6.84152535 0.03421572 12.02155263 6.44920809 7.62582937 10.67019053 10.51159118 11.15311124 8.47573100 8.92291349 9.33032153 6.36807162 11.94368952 8.97374931 10.64550245 10.20909582 10.91706792 9.11631927 10.66595355 10.52234505 8.21075900 5.57849195 8.22583789 7.33795099 10.54196478 6.17712848 10.50889012 6.89629123 11.21428651 10.45131941 7.44920726 14.35348947 10.52902570 9.47780440 12.24939980 10.40957169 3.73461208 -1.55088768 10.09846391 9.86177753 9.86018890 TCGA-E9-A1RG 62 0 NA 647 breast stage iiia t1c n2 m0 female 2011 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 1 1 2 2 1 1 1 6 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 2.427581e-07 20 25.7142857142857 0 25.7142857142857 28.5714285714286 8.3167522 8.4675000 10.6859859 6.7566644 9.4945544 9.0896475 9.2753931 9.3891314 10.3245716 13.9759982 10.8350317 10.3395701 -0.1137230 12.9642001 -1.1137230 9.8571245 8.3980523 7.9816963 7.7160224 12.2575316 NA 13.5437296 6.0461702 10.3882909 10.5165667 9.1682296 4.8635817 11.8639372 10.9034559 0.4712395 7.5902030 6.4936297 NA 0.4712395 8.8721414 10.5832670 8.2871791 9.1969124 8.2350277 9.3579746 -0.1137230 10.8452147 14.6115326 7.0638685 9.7442805 9.1090944 9.5156561 3.0562193 -1.1137230 7.6577893 9.3209278 0.4712395 10.5776068 4.3781509 4.3125635 5.9197214 8.8933267 11.8753391 9.9830147 10.8225694 12.1776141 10.4137765 9.8898174 9.5648996 10.3911184 10.1997494 2.8862965 11.1917913 7.2914406 2.8862965 11.0711749 8.7535781 1.2082051 4.5010123 7.8491955 8.1991825 10.2498868 8.6871993 2.4712655 7.0411181 11.2501605 10.3741395 9.9245327 9.1495688 0.502030 0.517510 0.100160 0.106580 0.065513 0.099288 -0.371780 -0.863180 0.085799 -0.381560 0.542940 -0.375610 0.086956 -0.364990 0.082909 0.082909 0.519090 0.557970 -0.388280 0.111990 -0.369520 -0.362040 0.050392 0.066229 -0.838250 0.031718 -0.075819 1.262500 -0.373020 -0.361240 0.113890 -0.378890 0.051131 0.000000 0.102490 0.108180 -0.371780 -0.863180 0.371010 0.084354 -0.395080 0.068158 -0.383690 -0.383690 -0.383690 -0.371320 0.095653 0.085943 -0.876500 0.082909 -0.367930 0.080456 0.519090 -0.368950 -0.390630 -0.364760 0.077430 0.077430 -0.365780 -0.397860 -0.885890 0.082765 -0.365900 -0.584410 -0.368160 1.232600 -0.848510 -0.873220 -0.388170 -0.367 -0.367 -0.368 -0.368 0.150 -0.369 -0.386 0.000 -0.370 0.564 -0.367 -0.835 -0.835 -0.366 -0.366 0.000 0.000 -0.357 0.145 1.233 1.233 -0.381 -0.374 -0.367 -0.367 0.000 0.000 0.000 0.000 0.102 0.102 -0.372 -0.372 0.000 0.000 0.000 0.454 -0.384 -0.384 -0.132 -0.132 -0.367 -0.367 -0.368 -0.368 0.150 -0.369 -0.386 0.000 -0.370 0.564 -0.367 -0.835 -0.835 -0.366 -0.366 0.000 0.000 -0.357 0.145 1.233 1.233 -0.381 -0.374 -0.367 -0.367 0.000 0.000 0.000 0.000 0.102 0.102 -0.372 -0.372 0.000 0.000 0.000 0.454 -0.384 -0.384 -0.132 -0.132 8.8848900 -1.1137230 6.7317901 11.7986275 12.3508453 8.0321808 11.2917069 5.1528973 9.7491305 0.4712395 11.1510353 12.4237121 5.2438518 -1.1137230 1.2082051 6.3861453 4.8170348 10.3307968 11.6349117 10.6436895 9.2093542 5.6936542 7.4637287 9.9657843 6.3539055 6.3125635 2.2082363 NA 9.5876060 1.2082051 5.1717032 8.2914410 8.8506404 11.5081911 9.3990399 1.4712395 10.4571039 NA 5.8975260 12.1947807 8.3761475 8.1103011 -1.1137230 5.2956900 8.0562248 6.5728003 3.4712655 NA 4.6676594 2.3457370 2.0562367 11.3266496 3.1342209 8.5120084 10.0649643 9.4954783 6.6871993 9.4360842 11.6056883 8.0587272 3.5867407 4.6411876 11.7487431 3.0562193 NA 2.8862965 6.0461702 13.329482 7.041118 9.272162 12.964200 8.849196 11.448065 12.257532 11.113615 8.598465 10.003943 12.325611 11.074888 7.657789 9.502848 3.278624 7.134227 11.258348 10.401014 13.123061 6.793190 13.011388 8.535556 4.817035 8.185507 8.666019 9.918531 7.572800 9.430298 10.835032 7.802179 1.693677 9.325091 5.731789 8.340661 10.082902 9.562257 10.196344 9.687676 9.811112 6.744281 5.171703 11.872147 8.287179 11.119620 10.558725 11.097275 9.807397 9.673386 9.981037 6.579787 NA 9.064815 8.146043 9.320928 5.394096 10.577607 5.781118 10.202134 8.893327 6.700401 13.797083 10.481091 9.638680 11.829730 10.178621 3.886297 3.973758 8.586739 8.897527 8.528351 TCGA-E9-A1RH 63 0 NA 1417 breast stage iia t2 n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 4 3 2 6 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 1.907385e-06 5.548757e-07 20.8333333333333 26.3888888888889 6.94444444444444 29.1666666666667 16.6666666666667 10.74506872 9.95349122 11.19318522 11.13638284 9.22526794 10.07003317 8.85118372 10.40374735 10.72466178 14.19755148 9.92317652 10.76729295 1.66530180 11.83999339 2.73571712 10.35181790 4.45191662 9.98046693 9.68156856 10.78840407 NA 7.51080768 9.99668222 8.97456631 10.86793097 7.05763439 -0.07157282 11.80576370 11.23099066 1.34340782 8.88931899 9.39391810 -1.65653532 4.40947919 10.26931454 10.43449396 7.16675661 11.46249246 9.82266419 12.03349634 9.89028374 9.37474587 15.73473352 7.30139102 7.90372221 12.01835383 12.48725070 4.22603064 6.02989013 10.47909856 11.89293326 NA 11.22622329 3.73570629 5.85118434 5.80282135 11.20680120 11.73584081 9.61017572 12.26513721 13.07661644 7.66080172 10.52516264 10.07979116 12.09869411 11.18436380 5.50325968 12.91211729 9.36991268 NA 9.60195534 9.89076586 1.15075462 3.59132037 9.77017807 10.36124155 10.54214117 10.47492473 0.34335097 6.58179411 12.81194963 12.59161332 10.23403349 8.46362695 0.1238800 0.1238800 0.5879300 0.7848500 -0.3087400 0.5581500 0.0230050 -0.1940000 -0.2198500 -0.3110800 1.8373000 0.2717400 2.0334000 -0.2258800 -0.0247980 -0.0247980 -0.2934300 0.0000000 -0.0347680 -0.2941400 -0.2918900 0.1796600 0.1796600 0.1796600 0.7480300 -0.1274600 0.6806800 2.8276000 -0.2814400 0.1238800 -0.0761070 -0.0545550 -0.0346310 0.4463000 -0.3116700 -0.3116700 0.0230050 -0.1940000 -0.1940000 0.0810330 0.0810330 -0.5969200 -0.2992200 -0.1720800 -0.1720800 -0.1720800 -0.2819200 -0.2999200 -0.5894100 -0.0247980 -0.0247980 -0.0247980 -0.2934300 0.0000000 0.0000000 -0.0347680 0.0179630 0.6844000 -0.2918900 -0.0068847 -0.2765500 0.1796600 -0.5690800 -0.3032200 -0.2210800 -0.2771500 0.2494900 -0.1980000 0.0047190 0.272 0.272 -0.201 0.000 0.000 0.000 0.000 0.383 -0.292 0.390 0.000 0.493 0.769 0.137 0.000 -0.269 -0.269 0.124 0.124 0.516 0.793 0.292 0.000 0.464 0.000 0.000 0.785 0.000 0.000 0.320 -0.238 0.000 -0.194 0.000 0.000 -0.220 0.000 -0.172 -0.172 0.000 0.000 0.272 0.272 -0.201 0.000 0.000 0.000 0.000 0.383 -0.292 0.390 0.000 0.493 0.769 0.137 0.000 -0.269 -0.269 0.124 0.124 0.516 0.793 0.292 0.000 0.464 0.000 0.000 0.785 0.000 0.000 0.320 -0.238 0.000 -0.194 0.000 0.000 -0.220 0.000 -0.172 -0.172 0.000 0.000 7.4726722 3.0438344 6.1762789 9.2622525 11.9061087 5.7245848 10.1020288 8.6069167 7.3905129 -1.6565353 10.2340335 11.8185780 2.1507546 -0.6565353 1.1507546 8.9525680 2.9872481 10.8509361 11.5675417 10.2453874 8.5960548 3.6287969 8.6608017 8.9132449 5.2741275 9.5350654 9.0351328 NA 10.7709640 -0.6565353 6.0298901 8.3671434 10.2674594 9.4816035 10.1880950 0.9283514 8.4348246 6.5625584 7.9962339 12.2642073 6.6425976 7.1214662 NA 7.7633492 7.6403057 1.1507546 2.3433794 10.5430616 3.1507384 2.2502946 0.9283514 11.4253719 0.3433510 10.4953571 10.2416127 10.5114345 9.6804536 10.5082961 12.5111994 5.9433025 1.6653018 4.0158187 9.6965360 1.6653018 NA 6.2800265 2.8669475 11.60254401 7.90563190 8.36019745 11.83999339 10.32317166 11.07024595 10.78840407 9.52454152 9.03338721 10.54306160 12.80991183 9.78425842 10.47909856 8.60313263 -0.07157282 9.23441342 13.10254922 11.1003625 11.5092383 5.3546179 14.1135366 10.0459948 7.5865629 8.5877531 9.7743644 9.7917172 3.7696554 7.2946740 9.9231765 7.7696541 7.0982764 12.1286373 4.9433025 8.8806369 14.3480486 10.3228144 11.8947370 8.7292516 7.1280242 10.2544066 6.7357063 9.8538171 7.1667566 9.8282122 10.0768283 11.0896936 9.1627700 8.8864209 10.5151916 9.9553362 8.3077300 8.7198293 8.0445395 11.8929333 6.8630253 11.2262233 8.5295036 9.0455620 11.2068012 8.2990390 14.3635228 10.0329505 10.9768386 13.3059690 9.4771736 -0.6565353 0.6653018 11.5048361 11.9318697 9.6910106 TCGA-E9-A1RI 43 0 NA 1449 breast stage iiia t1c n2 m0 female 2011 NA yes mixed histology (please specify) 5 white not hispanic or latino NA NA 1 5 6 2 3 1 3 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.080784e-07 2.774378e-07 21.4285714285714 35.7142857142857 0 35.7142857142857 7.14285714285714 10.90830067 10.40895435 11.73435792 9.24626057 9.22471585 8.66434986 9.99993110 10.03350973 9.13269122 13.66327755 11.72958553 10.65171959 0.68481874 13.48491303 2.75516533 9.37268205 7.20205720 8.87361759 9.86618240 13.03516834 NA 13.59710960 1.68477386 8.97018385 10.61965189 7.65976975 -1.63710936 7.55020577 9.32068098 3.68478508 6.89812852 7.83249512 -1.63710936 4.40725077 10.09034853 11.26993192 9.35791395 11.48211886 10.13434302 11.56803581 -0.05214686 10.75678013 14.48608578 8.15879598 9.68083138 11.05895169 12.09777475 4.73789223 4.14420956 9.44033683 11.88076889 -0.63710936 11.38365986 7.55514664 7.25767164 4.47137608 10.71792922 11.86319747 10.68928300 12.90261814 13.27255911 7.62729603 11.11335117 10.79942710 11.23167606 11.01860782 5.24549566 12.07752832 11.43966910 -0.63710936 10.22122314 9.20677458 3.12201002 5.64825547 10.29432977 10.52713193 10.72561924 10.48762100 4.61078273 7.75945814 13.10663604 12.78103554 9.97295553 9.13928658 0.060222 0.060222 -0.045228 -0.029311 0.017404 0.032563 0.031859 -0.517260 0.062294 0.062294 0.071248 0.027076 0.027076 -0.108670 -0.108670 -0.108670 0.019503 0.075344 -0.049369 0.022585 -0.013815 -0.546730 0.586140 0.730000 -0.086253 0.428730 0.434790 0.052810 -0.055706 0.060222 -0.179920 -0.045228 0.017404 0.017404 0.032563 0.032563 0.031859 -0.515370 -0.540580 -0.083716 -0.024388 0.062294 0.000000 0.000000 0.000000 0.000000 0.027076 0.027076 -0.062629 -0.108670 -0.108670 -0.108670 0.075344 0.075344 0.086088 -0.049369 0.022585 0.022585 -0.113720 -0.517640 -0.546730 0.586140 -0.193620 -0.539360 0.434790 0.052810 -0.011060 0.317870 -0.574270 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.299 -0.195 -0.547 0.730 -0.194 -0.194 0.000 0.429 0.000 0.000 0.000 0.000 0.000 -0.550 -0.180 -0.180 0.000 0.000 0.000 0.000 0.000 0.000 -0.503 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.109 -0.109 0.000 0.000 0.000 0.000 0.000 0.299 -0.195 -0.547 0.730 -0.194 -0.194 0.000 0.429 0.000 0.000 0.000 0.000 0.000 -0.550 -0.180 -0.180 0.000 0.000 0.000 0.000 0.000 0.000 -0.503 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.57595781 NA 4.87064583 9.75087076 11.74601777 7.14663791 9.89958638 9.00253798 8.78769169 NA 12.16658101 11.12062682 3.45031389 5.25767070 4.17020550 8.21772171 4.45031389 9.98764901 11.44799398 10.51798791 9.67232987 0.68481874 8.39765239 9.93744709 5.99221100 5.67573691 0.36289064 NA 10.51101224 6.19574326 7.97756328 7.82228529 6.02106436 9.17663469 10.19732458 4.68477947 8.31413819 -1.63710936 8.64825583 11.90540175 8.72917580 6.41813596 -0.05214686 3.61078273 8.30243284 -1.63710936 3.97756385 -0.05214686 5.06329153 6.49337194 1.82228147 9.95671142 -1.63710936 8.02284937 10.34120646 9.92652639 4.22083295 9.86618240 12.65366434 7.99947806 3.06329584 3.57230762 10.51830419 1.36283455 NA NA 0.68481874 13.1335613 5.5723076 9.4282697 13.4849130 10.5994656 10.2059894 13.0351683 12.7081201 9.5997766 10.9867350 13.4212681 9.8927720 9.4403368 9.1782368 -0.6371094 8.2020572 11.3508280 10.82918495 11.21460253 7.19257590 13.04666891 9.31777686 6.22704019 9.15808149 9.10010092 10.30630235 6.54276260 7.58202227 11.72958553 6.48697496 5.50240380 11.26107696 5.50240380 6.16135766 11.67005431 10.07064398 11.04628676 8.76373290 7.78491812 11.64970001 6.26974384 12.98054478 9.35791395 10.69349036 9.85570805 10.62582918 8.95811099 10.79226021 10.64652064 9.27499424 -0.05214686 9.44678494 7.47367572 11.88076889 6.67119287 11.38365986 9.47854738 10.31340935 10.71792922 7.04584810 13.82963099 10.42422467 10.65258419 13.17257140 9.45561059 0.36289064 -1.63710936 10.68478158 10.67119251 9.70936715 TCGA-E9-A226 45 1 1048 NA breast stage iiia t2 n2 m0 female 2011 NA yes infiltrating ductal carcinoma 6 white not hispanic or latino NA NA 4 1 3 2 2 1 3 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 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9.818090 -0.1071000 1.3811000 -0.5823500 2.1744000 -0.1864700 0.0375000 0.0597940 0.0285350 -0.5306100 -0.5306100 0.0762790 -0.1031600 -0.1031600 -0.0315320 -0.0315320 -0.0232920 0.0548030 0.0548030 0.0495400 0.6371900 -0.2797700 0.9501200 -0.5261400 0.1018300 -0.1229100 -0.1229100 -0.1229100 1.9386000 -0.4994300 -0.1071000 0.0000000 -0.5823500 0.0114000 -0.1864700 0.0375000 0.0375000 0.0597940 0.0285350 0.0702430 0.1849500 0.1882800 -0.7967000 -0.0047839 -0.0047839 -0.0047839 0.2077900 -0.1031600 -0.1031600 -0.0339500 -0.0315320 -0.0232920 -0.0232920 0.0548030 0.0548030 0.0548030 0.0495400 -0.3648800 -0.3648800 -0.2797700 -0.5318500 -0.5381500 -0.5261400 -0.0366480 -0.1229100 -0.1229100 0.3662500 -0.4570400 0.0787270 0.0794470 -0.103 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 -0.280 0.369 -0.532 -0.436 0.102 0.000 0.000 -0.123 -0.123 0.130 1.377 0.764 0.764 -0.457 0.000 0.000 0.000 -0.582 -0.582 0.000 -0.186 0.000 0.000 0.000 0.000 0.188 0.188 -0.480 0.000 0.000 0.000 0.000 0.000 -0.103 -0.103 0.000 0.000 0.000 0.000 0.000 0.000 -0.280 0.369 -0.532 -0.436 0.102 0.000 0.000 -0.123 -0.123 0.130 1.377 0.764 0.764 -0.457 0.000 0.000 0.000 -0.582 -0.582 0.000 -0.186 0.000 0.000 0.000 0.000 0.188 0.188 -0.480 0.000 0.000 0.000 0.000 0.000 6.9977169 NA 5.1171340 9.7829329 11.3703721 5.6794463 10.3802367 8.7542853 7.6494610 NA 11.6995643 11.5616896 NA NA 1.8351156 8.6447918 3.9903740 10.5241417 11.4415861 10.7082611 9.3931695 -1.6241543 6.4894081 9.0498573 4.6975959 -1.6241543 NA NA 11.0963369 3.9903740 8.3994194 6.8144569 6.0122893 10.8469364 10.3203772 -1.6241543 6.3586582 NA 8.9244871 12.1401221 8.1355533 5.5254112 NA 4.6044865 8.4145842 NA 0.6975959 NA 3.6235977 3.5662794 NA 10.3889878 NA 10.0217737 10.5292172 9.6777329 6.4841897 9.0113833 13.1430737 6.7808061 3.8350954 3.3756650 10.9692897 2.4631254 NA 2.3756789 NA 13.605836 5.183022 8.974648 11.657740 10.081298 11.073284 13.243185 11.516655 8.940767 10.845307 13.119553 9.293783 10.846578 9.735415 3.767983 7.635408 12.285746 11.283870 11.395777 7.406333 13.562901 9.634820 4.233643 9.424833 8.030301 10.823913 4.899229 8.233646 10.598158 6.202214 4.076106 11.447965 6.594834 7.034270 11.965316 10.239464 10.499463 6.618839 7.202214 12.577483 3.767983 12.582999 9.841232 10.094198 9.339284 11.691098 8.629513 11.386892 11.059098 9.293037 6.041002 8.627893 8.819137 10.804025 4.565488 11.749618 9.419376 10.040112 10.567958 7.321109 12.552072 8.992214 10.352229 12.165708 10.110798 NA NA 10.682012 9.809772 10.390732 TCGA-E9-A227 42 0 NA 975 breast stage iib t2 n1 m0 female 2011 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 3 1 6 2 4 4 4 4 4 3 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 6.935946e-08 30 40 0 20 10 10.3350764 9.6046357 11.5767582 8.8548254 8.7239530 9.3614596 9.9267963 9.8489488 9.0980123 12.6152771 10.3618034 10.4024932 2.0277910 12.2079842 2.2342254 9.6974908 6.5022733 8.4148112 9.2023298 13.0058935 3.1346974 13.4302673 5.9855596 9.9863720 10.0934631 5.4358719 NA 11.7033381 10.3877065 0.3273425 7.7409761 7.4014897 NA 4.9420593 9.3846633 10.0839046 10.0510093 9.4456406 9.8311741 10.5920842 13.7487887 10.3853401 14.5375441 8.2468821 9.4475862 11.4196100 10.8792969 4.8030823 5.9997746 8.5294723 11.7128064 NA 11.4322747 5.7282280 6.7324904 4.5561657 10.3046283 11.8662648 10.5190246 12.5832621 12.6783566 7.8953044 10.8785760 10.5082738 10.8020683 10.5334470 4.6311276 11.6215383 11.3871998 NA 10.1144347 9.2357409 2.5767882 6.3771966 10.5627644 10.0561192 10.1383216 9.3846633 2.2342254 8.5282470 12.2180876 12.1097324 9.8518900 9.3648954 0.53116000 0.54541000 -0.00360110 -0.00360110 -0.00235530 0.00000000 -0.00207840 -0.00207840 0.00319100 0.00319100 0.00110930 0.00422890 0.00875280 0.00583090 0.00583090 0.00583090 0.00527490 -0.00083160 -0.00097017 0.00332990 0.00583090 0.00345140 0.00345140 0.00819590 0.00861350 0.00861350 0.00861350 0.01042400 0.00598510 -0.00190450 -0.00152430 -0.00360110 -0.00235530 -0.00235530 0.00000000 0.00000000 -0.00207840 -0.00207840 -0.00207840 -0.00097017 0.01167900 0.00319100 0.00360760 0.00360760 0.00360760 0.00360760 0.00875280 0.00875280 0.00583090 0.00583090 0.00583090 0.00583090 -0.55276000 -0.00083160 -0.00083160 -0.00097017 0.00332990 0.00332990 0.00583090 -0.56435000 0.00345140 0.00345140 0.00652620 0.00861350 0.00861350 0.01042400 -0.00667610 0.01474900 0.01474900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.564 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.564 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.01647264 NA 5.82719406 10.22178720 11.82132887 7.74120876 11.21475939 9.60666301 9.58280191 1.91230496 12.35369890 11.81856137 6.64927630 1.64929355 2.78678453 8.18065810 4.30462785 11.25216087 11.50118165 10.69830817 9.29313272 1.64929355 8.41215656 10.45469791 7.37719665 6.18532940 -0.08773337 NA 10.71886051 5.67607555 9.91653128 8.29601499 5.47709443 9.30237938 10.45791897 5.80308235 7.65377803 NA 7.66719814 12.93998653 8.51840767 7.77236341 -1.67254257 -0.08773337 8.70347381 2.57526392 4.10870844 -0.67254257 6.94940070 5.66719956 3.99977456 10.23874041 -0.08773337 8.53923676 10.46913617 10.03901539 5.75361256 9.97390712 12.15359893 8.70564310 3.08224273 4.08223422 12.96000284 3.75361523 -1.67254257 0.32734246 0.64929355 13.0777141 5.1977121 9.1379200 12.2079842 10.5548771 10.9632932 13.0058935 13.1061442 9.3249584 10.4154740 13.5537982 9.8025752 8.5294723 10.1266300 -0.6725426 7.7515146 10.7687364 10.7687364 12.5234894 4.7367402 14.0514867 8.9748069 10.3710593 8.6447608 8.2506760 9.6179548 7.0654409 7.8291855 10.3618034 5.6582658 0.9123433 11.2147594 8.3046283 6.2406559 10.3003282 10.5257934 10.9335222 7.8291855 9.6520915 11.0227942 6.4821658 10.9468806 10.0510093 10.6297017 9.9193381 10.5678415 9.1892108 10.1427316 10.5050793 8.9207396 NA 9.6868069 8.2371067 11.7128064 6.3552542 11.4322747 7.1977131 10.8063707 10.3046283 7.1665518 14.3029053 10.6610628 10.6092784 13.0831748 9.7175174 4.4972738 1.3273425 10.2536444 10.1696987 9.8291855 TCGA-E9-A228 58 0 NA 1285 breast stage iib t2 n1 m0 female 2011 NA no infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 1 2 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9.710324e-07 3.81477e-07 28.2051282051282 33.3333333333333 5.12820512820513 15.3846153846154 17.9487179487179 10.4588954 10.0592314 11.4403181 9.6646963 8.5830474 7.7650852 10.2460694 9.9638085 9.6784582 14.8597381 10.2264266 11.3554519 1.7897293 14.9027655 4.1820328 9.8139312 3.0121038 8.5356692 8.4190715 13.8684218 1.7283124 14.4715208 -0.2102290 9.4891140 11.0520057 5.4715387 0.7896875 6.8083786 10.0285178 5.5085332 6.9529450 6.0502427 4.8486079 4.9462209 10.1063737 10.1413905 9.7229139 9.7336950 10.0352677 11.3262861 1.2047668 11.4879857 14.1949008 8.6433364 9.6120203 10.9533647 10.7167523 5.1116448 7.0627337 9.5199022 9.7125471 -1.7953584 10.6721034 4.8194638 5.7746079 5.6476973 11.2429857 12.1258496 9.9301187 11.6277371 14.6956348 7.1325306 11.1404701 10.7413592 10.5765292 10.3008088 5.2131801 11.7892454 11.9056257 1.3746778 9.9237134 9.2319675 2.8520588 5.5710761 10.6641841 10.4820399 10.2173771 10.5359494 0.7896875 8.9487454 11.0747319 10.2922154 9.8281768 8.6183804 0.00722170 0.00083195 0.00152550 0.00652620 0.00763920 0.00000000 0.00903120 -0.74360000 3.65690000 -0.73038000 0.00805670 0.00332990 0.01363200 -0.73275000 3.65690000 3.65690000 -0.00304750 -0.00207840 0.02946600 0.00138680 0.00013863 -0.76072000 3.65690000 2.72670000 -0.03612900 -0.03612900 -0.03612900 -0.00429290 -0.74829000 0.00722170 -0.73766000 -0.75572000 -0.34779000 0.00763920 0.00805670 0.01100200 0.00903120 -0.00567570 -0.00995650 -0.00320790 -0.00360110 -0.77607000 -0.00769240 -0.00193990 -0.00193990 -0.00415460 0.01363200 0.00954940 -0.75141000 -0.01050800 -0.00152430 -0.00152430 -0.00304750 -0.00207840 -0.00207840 0.00194180 0.00138680 0.00652620 -0.01078400 0.02426800 -0.76072000 -0.04156700 0.01810300 -0.03612900 -0.03612900 -0.00429290 -0.73714000 -0.00899060 -0.79093000 0.000 0.000 -0.731 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.705 -0.705 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.911 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.731 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.705 -0.705 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.911 0.000 0.000 0.000 0.000 0.000 8.2229528 6.2436710 4.5266823 9.9529453 12.1698153 6.5524186 10.0889231 8.8453047 8.6739977 -1.7953584 12.9894896 10.7846600 3.3746778 2.2922222 4.1354938 8.0965365 4.3945759 8.7698547 12.1532110 10.5959962 9.4299601 6.0502427 8.0689389 10.4299600 6.2922149 1.5266698 -0.2102290 NA 9.0851014 7.4526803 6.6804861 8.6764279 5.7821805 9.8606320 10.3674585 2.0121038 9.5943840 NA 7.0249313 12.9555642 8.3846616 8.0596208 -0.2102290 8.2047526 7.4785480 -0.7953584 4.5970723 0.7896875 2.5970782 7.8609808 -0.2102290 10.3680878 NA 5.8629646 10.4473312 10.0885414 5.4142066 9.0080764 13.5425835 8.9249968 4.0627348 3.7283124 13.8029214 3.7593370 NA 0.5266698 -0.7953584 15.945214 7.893003 9.116145 14.902765 10.333391 10.375617 13.868422 11.530620 11.870923 10.756220 12.098718 10.600287 9.519902 7.367144 4.062735 9.902155 11.206161 11.0153242 11.9568195 8.2367982 13.9385345 8.8468042 4.2922149 9.4425600 10.1813166 11.0618782 4.3746778 9.7026044 10.2264266 6.5623050 -1.7953584 11.4503053 4.5623035 9.0501093 11.4986552 9.4407668 10.8474812 8.6804861 8.6895756 11.6756656 3.4142032 11.5612815 9.7229139 10.2312760 9.8065234 12.4429333 9.6825108 11.4794219 10.8053624 9.6804859 2.5266698 9.1332784 5.6804847 9.7125471 0.5266698 10.6721034 6.0185340 11.3698166 11.2429857 7.3027842 14.2211038 9.6677660 10.2912206 11.6900787 10.3684022 1.0121396 1.5266698 10.8093057 10.3551346 9.8245139 TCGA-E9-A229 37 0 NA 1148 breast stage ia t1c n0 m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 1 4 3 4 1 5 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 2.774378e-07 26.3157894736842 26.3157894736842 0 31.5789473684211 15.7894736842105 10.7561574 10.3392844 11.8916376 9.7843129 8.1564452 9.2525484 9.9243489 10.2528734 9.4565265 14.0554149 10.5688743 11.0679613 6.2505959 12.6896436 4.1592255 9.5350636 5.9634024 8.6085298 9.5667841 12.5927596 0.7218538 13.1875959 7.3389779 8.9327722 10.7988551 7.5009892 -0.8630212 11.7219344 9.4112326 2.4587757 8.3105314 7.9522380 NA 4.4944092 10.2661374 10.9681617 9.8673246 11.5502179 8.1702776 11.5244680 5.4767057 10.9880179 14.4774522 8.8973748 9.6342074 11.2274631 11.6343321 5.1702776 4.1592255 9.6701842 11.7880183 -1.8630212 11.2645264 6.2661381 7.4429161 5.3752584 10.7595927 12.1600024 10.7241632 12.5751265 13.1573136 8.5962859 11.2014288 10.9351399 11.5632502 11.1212729 5.1255395 12.2489681 10.7732525 NA 10.3782419 9.2979862 4.2268630 6.5714827 10.2447254 10.4352035 10.2368597 10.0572074 2.7807090 8.8207263 12.4837837 11.2904065 9.8536738 9.2486423 0.0901410 0.9222900 0.0182430 0.0044411 0.0013868 0.0670880 0.0115390 -0.5721900 0.0000000 0.0000000 0.0137720 -0.0067813 -0.0030475 0.0047190 0.0047190 0.0047190 -0.5635600 -0.0056633 -0.0034627 0.0030522 0.0065262 -0.5654500 0.0109820 0.0109820 -0.0140900 -0.0140900 -0.0140900 1.4373000 -0.4188200 0.0901410 0.0218840 -0.5692200 0.0013868 -0.0131270 0.0011979 0.0011979 0.0087145 -0.5721900 -0.5819600 -0.0153290 -0.0153290 -0.5807800 0.0044411 0.0044411 0.0027745 0.0331000 -0.0030475 0.0070826 0.0047190 0.0047190 -0.5664400 0.0162860 -0.5715000 0.0015255 0.0094491 -0.0059522 0.0030522 -0.5703100 0.0065262 0.0140510 -0.5654500 0.0109820 0.0087528 -0.0140900 -0.0140900 0.0094491 -0.0545550 -0.5604700 -0.5604700 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.604 0.604 0.000 -0.560 0.000 0.000 -0.569 0.000 0.000 0.000 0.000 0.000 -0.572 -0.572 0.000 0.000 -0.581 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.604 0.604 0.000 -0.560 0.000 0.000 -0.569 0.000 0.000 0.000 0.000 0.000 -0.572 -0.572 0.000 0.000 -0.581 0.000 0.000 0.000 0.000 0.000 8.2916726 NA 5.5291713 10.5221776 11.4142871 7.0514787 10.5078143 8.7149251 8.5017659 2.3847682 11.5458475 11.5267358 3.8647705 -0.2782336 4.8372924 8.4811504 4.5631215 11.1354449 11.5696573 10.7057606 9.2156723 2.8372974 8.7460332 9.8075108 6.6206700 3.7218210 2.1368476 NA 10.9926963 6.0497440 7.5355981 8.3859681 6.8407578 10.1064352 10.4234122 4.8233570 8.5031766 NA 8.0527338 11.6229352 9.5662613 6.5419964 NA 6.7552401 8.0133713 -0.8630212 3.6914448 -1.8630212 5.7662109 5.8391660 3.0437469 10.1588755 1.4588019 8.3680756 10.6577186 9.7977418 5.6125884 10.0202615 14.0054359 9.1536627 4.0910481 3.3463045 11.1482565 2.9948331 NA 1.4588019 0.9441838 13.098259 6.636700 8.522717 12.689644 10.379433 10.838594 12.592760 12.629208 9.055718 10.517045 12.934161 9.261622 9.670184 9.714283 1.596267 7.608530 12.365523 11.3475258 11.4861357 7.9033836 13.1111333 9.2282898 6.1647601 9.0801017 8.9823445 10.5187867 7.4383502 9.1599157 10.5688743 7.0822981 6.4406350 10.6347063 6.1647601 8.4315670 11.3861161 10.4955057 10.5078143 7.8320830 9.0429934 12.4843374 6.9917225 11.6909204 9.8673246 10.5696573 9.7743850 10.9341106 9.7928323 10.9233283 10.6530469 9.0837607 NA 9.4362458 7.0673548 11.7880183 6.6604167 11.2645264 9.3644704 10.4663705 10.7595927 7.9475224 13.4410632 9.9932799 9.9099937 12.5999956 10.8818984 0.1368476 NA 10.5686132 10.2381736 10.5194785 TCGA-E9-A22A 74 0 NA 1189 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 3 6 2 1 2 1 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 2.080784e-07 10.7142857142857 32.1428571428571 3.57142857142857 25 28.5714285714286 9.6586749 9.2534327 10.9557485 8.4445081 8.6597277 9.0371864 8.8960332 10.5871663 10.9538187 13.6638323 10.6536642 10.8194443 -0.7612131 11.1950909 4.4285377 9.7255498 6.1929102 9.2980591 8.6363893 11.8103489 1.4086575 14.0325212 -1.7612131 9.4254604 10.6876053 8.0556984 2.2387257 12.5095276 10.1664926 1.4086575 7.1635269 8.0331306 -1.7612131 4.6816573 9.4645247 10.2800316 9.6245771 10.3168655 8.7012170 10.3673536 3.1929043 9.0540980 15.1428319 6.6847234 9.4890132 10.7576137 11.6812695 4.2831069 6.6180933 8.9784954 10.7225305 NA 11.4081700 7.8293016 6.6094019 5.0716039 10.7040260 11.4475587 9.9473675 11.9496287 12.4221175 8.7807792 11.3068212 10.3168922 10.8182664 10.1965423 3.5241138 11.6010696 9.9973544 -1.7612131 10.5353442 9.7976137 2.5656947 6.0266164 11.0988317 9.8839229 9.9806030 10.6382597 5.2831106 9.1907279 12.4228152 11.2748883 9.6465135 9.3360885 0.39031000 0.39031000 0.00917050 -0.00235530 -0.00024596 -0.00678130 -0.00027724 -0.40296000 3.65690000 -0.39196000 1.45890000 0.00805670 0.02718900 0.00360760 0.00221930 0.00221930 0.00388540 0.00388540 0.00277450 -0.39419000 0.00819590 -0.39040000 -0.37335000 1.84260000 0.02062300 0.02062300 -0.37279000 -0.00110870 -0.37763000 -0.38929000 0.00000000 0.34339000 0.00499690 0.00249690 -0.40008000 -0.40086000 -0.00027724 -0.40296000 -0.40296000 0.00166420 0.00166420 -0.40385000 -0.39975000 -0.39975000 -0.01257900 0.02572200 0.00638710 0.00638710 0.00360760 0.00221930 0.00221930 0.00221930 0.00388540 0.38469000 -0.01009400 -0.00456950 -0.39419000 -0.39419000 0.00819590 0.00763920 -0.39040000 -0.37335000 0.00083195 0.02062300 -0.37279000 -0.00110870 -0.42560000 -0.39453000 -0.42144000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 -0.347 0.000 0.000 0.000 0.000 0.000 -0.389 0.001 0.000 0.000 0.000 -0.388 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 -0.404 1.425 -0.387 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.394 0.000 0.000 0.000 -0.347 0.000 0.000 0.000 0.000 0.000 -0.389 0.001 0.000 0.000 0.000 -0.388 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.393 -0.393 0.000 0.000 -0.404 1.425 -0.387 0.000 0.000 0.000 8.9339429 NA 6.0904639 10.4771194 12.3695266 5.9627503 10.0143250 9.5778465 9.2217082 1.9391513 12.0500894 11.7833098 2.1456122 2.2387257 2.4086304 7.6050372 5.5148387 11.9642940 11.5532980 11.0775247 9.2059411 NA 7.5101779 9.7822300 6.9969378 4.4866436 0.2386646 NA 10.3998466 4.6816573 7.1425962 8.2016108 7.9356825 9.4109048 10.3846469 4.1694520 7.4457292 NA 7.6267319 11.6716480 7.3420026 8.3820979 1.0460719 4.9111403 8.6137541 NA 4.5785644 NA 7.1395810 3.3261778 3.1456122 10.9322017 0.5606171 7.6940416 10.4460342 10.3634822 5.3472404 10.3360885 14.1059211 9.0588936 5.2273984 5.1335306 10.2652382 3.6310344 -1.7612131 3.0967004 2.3261634 13.628498 6.210258 8.748490 11.195091 10.212412 11.112159 11.810349 10.487532 9.131258 10.629690 13.024525 9.824616 8.978495 8.244339 -1.761213 8.595167 11.230059 11.0331306 11.6133467 6.2159950 12.6469104 8.4854554 7.1694520 9.5763366 7.6691671 10.2313309 7.4747289 8.1136963 10.6536642 7.8497397 2.6310344 9.9482294 5.3261778 8.6598643 11.4934481 10.7839205 10.4448133 10.0351599 9.6565672 9.5060866 6.6691671 10.4254232 9.6245771 10.4836731 9.8789596 10.2156367 9.5333354 10.3505024 10.4678340 9.0959181 -0.7612131 9.4689093 7.5918619 10.7225305 6.3155300 11.4081700 9.3334521 10.5244435 10.7040260 6.6524693 13.1510427 10.4777165 10.6033966 11.9336167 10.5648633 1.5606660 -0.7612131 9.6470444 9.3621895 8.9910955 TCGA-E9-A22B 71 0 NA 1167 breast stage ia t1c n0 m0 female 2011 NA no mixed histology (please specify) 0 white not hispanic or latino NA NA 1 2 2 2 1 1 1 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 4.161568e-07 25.4901960784314 25.4901960784314 1.96078431372549 15.6862745098039 31.3725490196078 10.19655037 9.87550563 11.03443322 8.91756393 9.03201459 9.39849147 9.22377922 10.16237874 10.32064082 14.69279480 10.27525539 10.71754920 2.26029670 12.59591876 3.30761796 9.33498183 4.72845388 8.68321080 6.63881672 12.52732584 0.67536431 13.45119975 0.93839872 9.75495012 10.44716218 8.75001922 NA 8.55667695 9.88577049 2.74573213 7.76068203 7.62487732 2.16075888 5.41950518 9.24671614 10.25503565 9.71096653 10.45965026 9.69215098 10.14783034 -0.06160128 11.11205415 14.71479290 6.75061856 9.44683208 10.75135651 11.05168511 4.69326391 6.34776840 8.85922603 10.32387994 NA 10.59211781 6.00446544 5.05385422 4.05385856 10.49552159 12.16719570 9.89934423 11.33408961 12.78719552 7.99185060 11.17817439 10.33462503 10.66061528 10.64975717 4.17741555 11.58628507 11.22262274 -0.64656378 10.50918148 9.20281953 1.53291536 5.72845388 10.95727264 10.51423137 10.50601624 10.53301264 4.54323603 9.13641264 11.80604185 11.03618969 10.00625945 8.87206751 0.1259400 0.1227000 0.0186630 0.0186630 0.0384890 0.0533790 -0.0055672 -0.0055672 3.6569000 -0.6037500 1.0481000 0.1082100 0.7429000 -0.2065700 -0.2065700 -0.2065700 -0.0042929 -0.0042929 0.0351000 -0.0128510 -0.0542860 -0.4374500 0.2163700 0.7906500 0.9334500 0.3004300 0.3004300 0.2166800 0.1502400 -0.5563700 -0.0034627 0.0186630 0.0471260 0.0384890 0.0533790 0.0533790 -0.0055672 -0.0055672 0.0024969 0.1025500 -0.2672100 -0.6231200 -0.6007100 -0.6007100 -0.6007100 -0.5989600 -0.5336800 0.8247000 -0.2089200 -0.2065700 -0.5453200 -0.5453200 -0.0042929 0.0116790 0.0116790 0.0351000 -0.6071900 -0.6071900 -0.0542860 0.1255000 -0.4744800 0.2163700 0.0000000 -0.6284600 0.3004300 0.2166800 0.0382060 0.1259400 0.1259400 -0.395 -0.503 -0.207 -0.207 0.000 0.000 0.000 -0.594 0.000 0.125 0.125 -0.258 0.216 0.000 0.000 0.000 0.251 0.000 0.000 0.217 0.217 0.000 0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.582 -0.546 0.495 -0.601 -0.601 0.000 0.000 -0.395 -0.503 -0.207 -0.207 0.000 0.000 0.000 -0.594 0.000 0.125 0.125 -0.258 0.216 0.000 0.000 0.000 0.251 0.000 0.000 0.217 0.217 0.000 0.126 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.480 -0.582 -0.546 0.495 -0.601 -0.601 0.000 0.000 8.58823191 1.93836108 5.55308705 9.85773690 11.91661077 7.30262887 10.65319494 9.14810665 9.90875618 1.81282677 12.65541075 11.74032510 3.26031176 1.93836108 3.44087249 8.25428129 3.56286517 11.74613441 11.54616965 10.24177727 8.96904426 0.67536431 8.28267285 10.42051272 6.40326261 8.20672429 4.10829863 -1.64656378 10.32567637 5.21139385 6.17996282 7.50569963 4.28415134 9.75101961 10.07920675 2.93837990 7.29592869 NA 7.52834002 12.52224330 7.29885807 8.36184291 0.35343622 6.17359320 8.72301171 NA 4.50316425 -1.64656378 4.41950518 4.89365829 -0.06160128 10.77889273 -0.64656378 8.56530280 10.62895709 10.32316073 5.34209956 9.15915839 13.35930216 7.88479570 1.67536431 3.35340799 12.72239833 5.06766023 NA -0.64656378 -0.06160128 13.326470 5.710966 9.169598 12.595919 10.654625 10.692986 12.527326 11.461776 8.913747 10.390961 12.624659 10.843263 8.859226 7.403263 NA 7.648035 11.815405 10.2110068 11.6488965 5.7109662 14.0795786 9.2183743 5.0676602 9.1567384 8.2929938 9.4690760 5.9308438 9.0080507 10.2752554 7.2113958 1.5233612 9.7817748 4.6571941 6.6587927 11.2589895 9.2565432 10.7981706 7.8452674 9.4801191 11.6444413 3.7109662 11.7103162 9.7109665 10.3930191 9.7628054 11.5523199 9.2907884 10.7612134 10.0017721 8.8412545 -0.6465638 8.2383178 7.4659843 10.3238799 3.6013400 10.5921178 8.0434123 9.9879170 10.4955216 7.0013406 13.5294707 11.0642210 10.2459573 12.6164636 9.4032630 NA 2.8128473 10.4465019 9.4215210 8.6155094 TCGA-E9-A22D 38 0 NA 1248 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 3 2 2 1 4 1 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.387189e-07 40 26.6666666666667 0 13.3333333333333 20 10.3360615 8.7533990 11.5947013 8.3122722 9.2513295 9.5506229 9.4851845 9.6250449 8.9481970 12.6771969 11.6524545 10.4642754 -1.9556758 15.1546354 1.3662523 9.4867405 5.0100995 8.6636182 10.7351862 13.1703340 NA 13.9163648 2.2142492 9.5587136 10.3096372 6.1211315 0.3662523 10.7325656 10.1525129 -0.9556758 8.6872693 6.0043171 -1.9556758 4.9750523 10.0646008 9.8330335 9.5210613 8.9897589 9.4489247 10.5938592 -0.9556758 9.2304295 14.0897336 7.5256704 10.2803294 10.6266925 11.4102275 4.2142414 4.4193569 9.1645530 10.2010304 NA 10.9674570 8.2254673 8.6663671 6.0443154 9.5570556 11.9682926 10.6578745 12.0260609 12.7731392 6.6065577 10.6960396 10.2901650 10.8664877 10.6852380 3.9022955 11.6023771 11.9741284 -1.9556758 10.2800303 9.2173677 1.6340821 6.3662435 10.2698239 9.3297174 10.2634838 9.4768572 2.0443242 5.4537052 12.1238833 11.6581047 9.7456217 9.6608641 1.6030000 0.2338000 0.0051359 0.3068100 1.9245000 0.2372100 0.4067700 -0.0914200 -0.6875200 -0.2584200 0.2074800 0.2254500 -0.1038100 -0.0415670 3.6569000 -0.3009800 -0.0953840 0.2327200 -0.6966700 0.8071400 -0.1119500 -0.3344500 3.0940000 2.5309000 -0.2353300 0.1143300 0.1143300 3.6569000 -0.0873140 -0.0873140 0.0022193 0.0051359 0.1843400 -0.0571160 -0.1294000 -0.1294000 0.0589370 -0.0914200 -0.0872140 0.0140510 0.0237060 -0.6875200 1.7774000 -0.0221950 -0.0221950 -0.0221950 -0.1038100 -0.1038100 0.1440200 -0.0415670 -0.4243200 -0.2730800 -0.0953840 0.2327200 0.2327200 -0.6774700 0.6509300 0.6911100 -0.1119500 -0.3944100 -0.4205700 -0.2985200 0.3391800 -0.1528500 0.1143300 -0.2857200 0.1042400 -0.0944600 -0.7209900 0.225 0.122 -0.273 -0.273 0.233 0.233 0.000 0.691 -0.112 -0.337 -0.505 -0.299 -0.299 0.000 0.000 -0.235 -0.121 0.000 0.000 0.149 0.149 0.104 -0.680 -0.242 -0.242 0.000 0.000 0.174 0.000 -0.129 -0.129 0.000 0.000 0.000 0.000 -0.688 -0.149 0.000 0.000 0.000 0.000 0.225 0.122 -0.273 -0.273 0.233 0.233 0.000 0.691 -0.112 -0.337 -0.505 -0.299 -0.299 0.000 0.000 -0.235 -0.121 0.000 0.000 0.149 0.149 0.104 -0.680 -0.242 -0.242 0.000 0.000 0.174 0.000 -0.129 -0.129 0.000 0.000 0.000 0.000 -0.688 -0.149 0.000 0.000 0.000 0.000 8.70876249 -0.95567583 4.41935686 10.45211406 12.12021215 6.81679424 10.39414936 8.76032875 9.50433079 1.95121476 12.60584186 12.00854144 1.62928667 -1.95567583 1.36625226 7.61227140 5.17359919 13.06806958 11.12862535 10.89039319 9.51903527 0.04432417 8.78662478 10.16520109 8.66178273 1.74476389 0.85167909 NA 10.30699731 7.20418670 7.34581150 7.88980510 3.68816917 10.42031849 9.92389851 4.11040501 9.20481687 NA 6.15284052 12.27696098 8.67184921 6.65534038 -0.95567583 0.36625226 8.31344178 NA 2.68818036 -1.95567583 9.10905805 4.86526065 5.55210958 10.58807212 NA 5.63677251 10.70364226 10.17649357 7.15545073 10.63677224 14.72335541 9.62174402 8.18769848 6.47894269 12.75496024 1.36625226 -0.95567583 0.04432417 -0.95567583 15.2688989 6.5912097 9.4805063 15.1546354 9.8211595 10.6020183 13.1703340 12.0883678 9.1600093 10.6332641 13.8972104 9.4425245 9.1645530 8.5950620 0.3662523 9.5083504 11.4495897 10.5909685 13.0662495 6.2488858 13.1464546 8.7176243 8.6989512 9.5296414 8.8604988 9.8548427 8.9421608 9.0287338 11.6524545 6.5281306 0.3662523 11.2885304 7.3819374 8.5583488 9.8395432 11.0485357 11.7178451 8.8108441 9.3458115 8.9750526 8.3017029 10.9253221 9.5210613 11.7206029 9.7167406 10.7681895 9.2963893 10.6250449 10.2631812 8.0215952 NA 9.4619464 7.2779345 10.2010304 8.5220734 10.9674570 5.8580954 10.9260009 9.5570556 7.5989041 13.5092757 10.9448047 10.3069973 12.4520477 10.0856322 6.3297174 2.5678861 9.6198544 10.5933779 9.2409172 TCGA-E9-A22E 56 0 NA 1269 breast stage iiia t2 n2 m0 female 2011 NA yes infiltrating ductal carcinoma 4 white not hispanic or latino NA NA 4 1 5 2 2 2 5 2 3 3 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.976745e-06 4.855162e-07 5.47945205479452 27.3972602739726 6.84931506849315 30.1369863013699 30.1369863013699 10.2142518 9.5462387 10.7556725 8.0684494 8.7957241 9.0694551 8.0804717 10.5007378 10.6280385 12.5274236 10.2115211 10.4378778 5.3639805 10.9431928 1.9045419 10.2699957 4.0420489 8.5192580 9.9124163 11.6244503 -0.4173477 12.5640089 3.1061808 9.9291338 9.7260032 7.1825324 -1.4173477 11.8195311 10.1950278 1.5826042 8.2282785 8.1954884 NA 4.9576593 8.8633909 9.9845661 10.0573399 9.0532789 9.3130903 10.1086302 5.4895108 10.3782539 15.3135147 6.6380116 9.6766978 10.9352152 10.6591016 4.8863989 5.5598986 9.2839264 11.0049477 -1.4173477 11.4900741 8.4075788 6.9920104 5.4529841 10.0400009 11.7640829 10.7712089 12.2617702 12.3345824 9.5455161 11.2379271 10.2192446 10.8829726 10.4973788 3.2830624 12.1854349 9.3574071 NA 10.7269596 8.9781541 2.4515145 4.8680200 10.6098349 10.2101540 9.5741418 9.5221992 6.0904152 6.6647687 12.9920773 11.7541096 9.3190220 9.6379025 0.319000 0.941600 0.468270 0.915230 -0.425060 0.025110 -0.099472 0.049114 0.182830 -0.337330 1.188300 -0.156430 -0.407150 -0.086386 -0.086386 -0.086386 -0.049154 -0.102200 -0.393300 0.468440 -0.100340 -0.397860 -0.397860 0.589730 0.117410 0.117410 0.117410 0.863140 -0.044415 -0.398860 -0.184330 -0.384810 -0.119520 -0.141030 -0.420790 -0.420570 -0.220980 0.049114 -0.413440 0.227290 -0.192240 -0.555270 -0.402220 -0.409700 0.219600 0.596920 -0.404950 -0.358740 -0.402630 -0.086386 -0.371890 -0.372450 -0.049154 -0.412120 -0.416080 -0.396440 -0.408820 -0.405880 -0.100340 -0.351450 -0.093271 -0.397860 -0.274640 0.117410 0.117410 0.862750 -0.096572 -0.383250 -0.395450 -0.266 -0.405 -0.372 -0.372 0.000 0.000 -0.396 0.403 -0.100 0.231 -0.120 0.124 0.124 -0.130 -0.306 0.117 0.117 -0.399 1.548 0.234 0.234 0.000 -0.383 0.000 0.000 0.000 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 0.227 0.035 -0.557 0.631 -0.171 0.220 0.000 0.000 -0.266 -0.405 -0.372 -0.372 0.000 0.000 -0.396 0.403 -0.100 0.231 -0.120 0.124 0.124 -0.130 -0.306 0.117 0.117 -0.399 1.548 0.234 0.234 0.000 -0.383 0.000 0.000 0.000 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 0.227 0.035 -0.557 0.631 -0.171 0.220 0.000 0.000 8.3688897 NA 6.8162400 9.9914805 11.1834621 6.7677925 10.2327742 10.0683136 9.1964278 -0.4173477 12.0446110 12.2597814 1.1675506 4.3899729 3.1061808 8.2726181 4.2550475 12.3580245 11.7413875 10.6011680 9.0714642 5.6049875 8.6793351 9.7779922 6.5074331 7.5541637 2.7525345 NA 10.8111382 7.1936446 8.9619983 8.5280637 5.7822932 9.8869200 9.9246946 2.6700925 7.0004722 -1.4173477 8.6766976 12.3812943 8.3672549 8.6379025 NA 4.1061808 8.2585769 4.7525452 5.0088857 0.5826523 6.2761077 4.6911433 2.3899797 10.5298917 -1.4173477 8.4265411 10.0749739 9.8755168 5.9224690 10.1792757 13.1407417 7.9313480 3.1675827 5.4155086 11.2618802 5.0255648 NA 2.3899797 1.7525345 12.297189 5.310540 8.096348 10.943193 10.364390 11.239268 11.624450 11.231202 9.211066 10.432025 13.152535 8.609144 9.283926 9.510398 -1.417348 7.849406 11.155083 11.0400009 11.9770827 5.6049875 13.0545479 8.6049879 6.6647687 8.3122409 6.7323669 10.3396308 6.4895108 7.6594358 10.2115211 7.6832824 2.0420489 10.0389744 6.5074331 6.7220684 11.9124164 11.1687561 10.8841162 8.7041537 9.1862465 9.6331489 5.8494064 11.3266465 10.0573399 10.9760105 9.7705906 9.8932328 9.6091435 10.4202480 10.4675537 8.5882447 0.1676148 9.5663049 7.5426218 11.0049477 5.9489419 11.4900741 10.6790058 10.2756713 10.0400009 6.9090494 13.8572166 10.3291344 10.6081056 12.1430723 9.9603728 NA -1.4173477 9.7164045 9.6845958 9.6049879 TCGA-E9-A22G 47 0 NA 1239 breast stage iia t2 n0 m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.011424e-06 7.282743e-07 6.02409638554217 19.2771084337349 3.6144578313253 34.9397590361446 36.144578313253 9.7442514 8.8903841 11.9567836 8.0846824 8.8569091 7.4797520 9.1246130 10.4302135 11.4132059 12.1672767 12.4563133 10.3701272 3.3148415 11.6061594 2.0152835 8.9899195 6.8026844 8.4607770 10.4115599 6.4947532 NA 9.1181687 7.0152846 8.7935435 11.1127089 5.5627736 1.1222089 7.4696630 12.1959587 -0.6852455 10.5550398 6.4747167 -0.6852455 2.2217224 8.7742764 10.2463210 8.9995933 9.3856366 9.8851749 11.5617338 -0.1002057 11.5712009 13.2656284 8.0207883 9.6008248 10.5863077 9.7012462 4.5816284 NA 9.0579961 12.1059059 NA 9.8006741 3.5243019 4.1974880 3.9587035 7.6254575 12.7224445 9.4991002 10.7063568 12.1130128 5.2921265 11.6134802 11.1138126 10.7799010 10.8199119 3.6349649 11.5791407 9.3489558 -1.6850135 9.4447716 9.5297710 4.8544695 3.3148415 8.5181928 10.9539593 11.2022558 9.8141923 -0.6852455 8.4009810 12.0597837 11.5474156 10.1905941 9.8535187 0.7107600 1.4851000 0.8211800 0.0474100 0.7879400 0.5799800 0.0207630 -0.7692800 0.0351000 0.0351000 0.1503900 0.1156500 -0.7603800 0.0725400 0.0457080 0.1974000 1.1740000 0.2479300 0.5408300 -0.7495900 -0.5860800 -0.7795600 -0.7795600 0.0428740 0.5629400 1.5588000 -0.7979500 -0.7015400 0.0062481 -0.7362600 -0.7933600 -0.7474200 -0.7759200 -0.7302000 -0.7410700 -0.7482900 0.0207630 0.0538060 -0.7653500 -0.8136700 0.7013900 0.0352420 0.0696690 -0.7669800 0.0291840 -0.0810730 -0.7603800 0.0174040 -0.7494200 0.0457080 -0.6538900 -0.7468000 1.2783000 -0.7147900 0.7954900 -0.7478600 -0.7495900 -0.7470800 -0.8141700 -0.6427400 -0.7795600 -0.7795600 0.1468200 -0.1042100 -0.7979500 -0.1704400 -0.0510460 0.0168450 -0.0065050 0.000 0.000 -0.705 -0.705 -0.710 -0.710 -0.746 -0.750 -0.586 -0.786 -0.786 -0.758 0.000 0.147 0.147 -0.104 -0.104 0.000 0.508 -0.708 -0.708 -0.158 0.000 -0.733 -0.733 -0.747 -0.747 -0.730 -0.730 -0.245 -0.741 0.000 0.000 -0.721 0.000 0.000 0.000 0.000 0.000 -0.239 -0.239 0.000 0.000 -0.705 -0.705 -0.710 -0.710 -0.746 -0.750 -0.586 -0.786 -0.786 -0.758 0.000 0.147 0.147 -0.104 -0.104 0.000 0.508 -0.708 -0.708 -0.158 0.000 -0.733 -0.733 -0.747 -0.747 -0.730 -0.730 -0.245 -0.741 0.000 0.000 -0.721 0.000 0.000 0.000 0.000 0.000 -0.239 -0.239 7.9819565 NA 6.8066978 10.5651431 12.2557089 5.9414303 10.8089503 7.7668800 8.5390878 NA 11.3164288 10.3201184 3.4023129 NA 3.4023129 10.4125477 2.7071714 8.7452972 11.8226394 11.3702967 10.3455119 2.8384073 9.6679916 11.0346614 5.3482678 1.4847568 0.6367290 1.4847568 9.4473445 6.9766225 6.9073017 8.9119663 6.3372133 9.4639187 11.1350237 0.6367290 8.6014024 4.4847697 9.2149568 13.2941806 8.3728363 7.3701268 NA 5.0427669 9.0290903 -0.6852455 0.8997943 NA 3.7742810 4.9305860 5.0563104 11.4691882 NA 8.8295588 11.1000928 10.2028269 2.9586942 9.5681013 12.3079600 7.7763245 3.5243019 3.4023129 10.6690941 3.0697365 3.2690481 3.1221923 7.8713508 9.286388 11.003532 9.559803 11.606159 11.029520 12.502893 6.494753 10.092922 9.688662 11.566327 13.023929 11.227547 9.057996 9.296412 5.973056 9.110884 10.436054 11.4454153 11.4155071 5.9147582 14.4482272 8.0680613 5.4645931 11.1183705 8.6513513 10.6399084 4.8694322 3.9872663 12.4563133 10.1677644 NA 9.9026223 9.1173610 8.9088988 12.2068183 11.5267330 9.8951032 7.9925645 8.7146566 6.5096008 5.7905792 10.6622003 8.9995933 10.2558924 10.8129460 11.1088544 11.6031341 9.9890371 11.3983241 7.9147576 NA 9.3106189 6.5661850 12.1059059 2.6367754 9.8006741 8.0929220 11.2207958 7.6254575 7.4578454 14.2784634 11.0569436 10.0355166 12.7490169 11.9327713 4.6367754 -0.1002057 9.7505151 8.5944552 9.7247660 TCGA-E9-A22H 42 0 NA 1232 breast stage iib t2 n1 m0 female 2011 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 3 1 2 2 4 1 1 4 1 1 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 0 42.8571428571429 0 0 35.7142857142857 21.4285714285714 10.91666458 10.10582380 12.32266402 9.85632732 8.33207818 10.24871947 10.45509066 9.70153069 7.48001221 13.91924989 11.18701994 10.85298753 2.81977035 12.41241845 2.71283786 7.82938977 6.67061801 8.45638563 9.86454554 13.38642687 3.14169436 13.89674375 8.28036342 9.60343774 11.31789808 8.17353823 0.33433944 8.63354237 11.01451807 1.01242565 6.57082720 6.26507115 NA 4.47183776 10.39043017 10.66188701 12.42880799 11.56351367 10.34612065 11.91091318 0.01235413 12.13725455 12.88301179 9.14890412 9.63445805 12.20469909 11.48560464 4.59737027 5.48001302 8.99183133 13.10669018 NA 12.11798744 4.43867211 6.33433408 4.16215363 10.19697176 12.23489932 10.74117715 12.37667775 13.24711145 7.81168809 11.08370103 10.79811825 12.16540406 11.32571448 5.39611153 12.24602593 7.82297801 -1.98735982 9.83178701 9.46670562 2.76568325 5.61973579 11.04083039 10.40552858 9.66569921 9.83298413 0.01235413 10.25498500 12.39900976 11.09870839 10.48281098 9.15003792 0.78179000 0.78584000 0.00000000 -0.01381500 -0.01391600 0.02468900 -0.00830050 -0.00830050 0.00000000 0.00000000 0.01433000 0.00477140 0.00986690 0.02160300 0.02160300 0.02160300 0.00541390 -0.00625180 0.05224100 -0.00236430 0.01502800 0.01195800 0.01195800 0.01251600 0.00569190 0.00569190 0.00569190 0.02468900 0.01000600 0.01000600 -0.00235530 0.00000000 -0.00013862 -0.01391600 -0.00097017 -0.00908870 -0.00830050 -0.00830050 -0.00830050 0.00152550 -0.00175440 0.00000000 -0.00298960 -0.00298960 0.01000600 0.01000600 0.00986690 0.03538300 0.02160300 0.02160300 -0.72491000 -0.72491000 0.00541390 0.00239400 0.01600600 -0.65854000 -0.00097017 -0.00097017 0.01502800 -0.72039000 0.01195800 0.01195800 0.00352880 0.00108690 0.00569190 0.02468900 -0.00926660 -0.71568000 -0.73900000 0.000 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.729 -0.720 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.772 0.000 0.000 0.000 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.659 0.000 0.000 0.729 -0.720 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.772 0.000 0.000 0.000 -0.716 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.4543129 NA 6.0513242 9.9110077 11.2388184 7.0837346 10.7485967 9.2460620 8.4861122 1.1823109 11.4176807 10.9660025 3.2603268 3.3699550 2.8197704 9.1137255 3.4047260 10.7485967 11.4495081 11.5023796 9.6312506 7.1519572 8.0798405 9.5940777 6.3611349 4.1621536 3.2218616 -0.9876459 11.1176600 7.2218597 6.1519582 8.2206405 7.5437874 8.6625605 10.7793492 3.0568089 7.7058929 -1.9873598 6.9519852 11.6454015 8.1997582 7.0892216 -0.9876459 6.3522571 8.5641144 2.4047124 2.1823427 -1.9873598 5.7197666 6.3656418 2.4718378 9.9875377 NA 7.3230187 10.4384089 9.8854658 4.3343323 10.0998692 14.7139970 8.2850359 2.2603268 2.8703844 12.5974862 2.3343394 NA 2.4718378 1.3343394 13.829565 7.174798 8.867275 12.412418 10.294145 11.333066 13.386427 13.102850 9.403650 11.372019 13.502536 8.405797 8.991831 8.332078 1.182311 8.022235 11.585935 11.0952206 11.7921256 7.6971545 13.4478477 9.3081752 5.8703869 9.1038417 9.8245836 10.1656257 5.9192972 8.3024251 11.1870199 5.9372196 -0.4025880 11.1930925 2.8197704 7.3929974 9.7743730 10.3156163 11.1297247 10.3781819 7.7076345 13.3258208 5.4553502 12.8281743 12.4288080 10.7132794 9.7141459 11.2769955 8.8413360 11.1684894 10.7894560 8.9918313 -0.4025880 8.4177606 6.7363397 13.1066902 5.3433225 12.1179874 6.7605989 10.0416935 10.1969718 7.7538733 13.2140313 10.7803838 9.8543637 13.1907210 9.7945855 2.9665966 -0.9876459 10.9781906 11.1253344 9.9676929 TCGA-E9-A243 52 0 NA 612 breast stage iia t2 n0 (i-) m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 3 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.491228e-06 3.81477e-07 10.5263157894737 28.0701754385965 8.7719298245614 24.5614035087719 28.0701754385965 10.8869024 10.3045157 11.3240834 10.2096126 9.3784631 9.8787002 7.8388144 10.7753020 8.2670268 11.7045332 11.2642920 10.6352027 4.9230731 10.5622603 4.6011438 9.4954959 5.8893884 9.2887221 10.0571039 9.5810644 NA 9.2067665 7.2044851 9.0150978 10.0855801 6.9614011 0.2226809 10.7162081 10.6632944 3.2930173 7.6011446 8.5598088 -2.0991235 6.4514518 10.7890675 10.8025145 10.1301244 10.1417942 10.6535035 11.2377691 1.0706641 7.4856675 13.8235679 8.0726820 8.1064980 11.4970111 10.9570038 4.5445596 -2.0991235 9.7450183 11.2255885 NA 11.5018952 7.2427797 9.7714548 6.7586856 10.2889912 12.1061926 10.2310615 11.9209903 13.0433703 5.7955228 11.2655234 10.8178549 11.3794744 10.9698188 5.1486332 12.0232093 8.2338603 -1.0994326 10.0671817 9.9704902 2.9507670 7.2450002 10.3342903 10.5836994 10.4538541 10.7248680 2.6011498 6.2090439 12.5706971 11.9584427 9.7718400 8.9881677 0.49986000 0.59206000 0.88526000 0.09779100 0.32237000 0.38304000 0.04060900 -0.08545700 0.10257000 0.10257000 0.31386000 0.06350900 0.06350900 0.35561000 -0.01161100 -0.01161100 0.25511000 -0.05347600 -0.05967300 -0.07960900 0.07009900 -0.01986300 -0.01986300 0.33642000 0.36411000 0.20626000 -0.12823000 0.09579800 -0.11744000 -0.09999900 -0.00069303 0.09779100 -0.14875000 0.02230400 -0.21211000 -0.04563500 0.04060900 0.04060900 -0.24192000 0.03582900 0.04457400 0.10257000 0.09391100 0.09391100 -0.23472000 0.07182200 0.06350900 0.06350900 0.35561000 -0.01161100 -0.15594000 -0.15594000 0.25511000 -0.05347600 -0.05347600 -0.05967300 -0.07960900 -0.07960900 0.07009900 -0.13368000 -0.01986300 -0.01986300 -0.06437400 -0.07187300 -0.12823000 0.09579800 -0.09868200 0.30713000 0.22792000 0.000 0.000 0.356 0.000 0.255 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.206 0.000 0.000 0.500 0.000 0.000 -0.127 -0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.383 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.356 0.000 0.255 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.206 0.000 0.000 0.500 0.000 0.000 -0.127 -0.102 0.000 0.000 0.000 0.000 0.000 0.000 0.383 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.000 0.000 0.000 0.000 9.35808566 NA 5.61495125 8.95327281 11.39305876 5.83533799 9.63075037 9.91991671 7.73359500 -1.09943263 14.38489832 11.24191083 2.29301727 -2.09912353 4.31009286 9.00005269 5.43986246 11.80674982 11.44675517 10.10282856 9.53233664 0.70805477 8.47245731 9.57886477 9.02869898 7.87655255 -1.09943263 -0.09927807 11.58358969 4.87798468 8.05805181 8.08805677 9.07687785 8.87583626 10.20619656 5.40849789 7.60114456 6.94509848 8.80081676 12.67482265 8.51357325 5.32696871 -1.09943263 3.07062976 9.24333515 2.98817568 1.70805477 NA 8.85562817 4.51644386 6.77722112 10.30398321 5.17682938 9.62947556 10.45577322 10.14119800 6.56248362 10.87188907 14.65916226 10.96780301 7.35397514 5.41640403 10.61795281 -0.51436709 1.48568443 2.36013950 3.57313212 11.3031200 8.7524539 9.9000002 10.5622603 10.6997840 11.9840179 9.5810644 10.3565457 9.0536235 11.4747069 13.4346732 10.3913050 9.7450183 7.9230725 0.7080548 8.8373428 10.6245790 10.7884966 11.7507939 4.1295221 13.5589431 9.1210830 8.8636009 8.2305013 7.4572109 9.3653680 8.2438904 6.8664889 11.2642920 8.7024131 -0.5143671 11.6275616 7.4837876 8.5828303 12.1349235 11.2948995 10.9022889 8.0479097 8.1174509 10.2330211 10.2700295 11.5882128 10.1301244 10.4308672 9.0612065 9.9811892 9.6430143 11.2892603 10.4655688 9.0196458 -2.0991235 8.9208584 10.2903523 11.2255885 10.0335258 11.5018952 9.3253961 10.3965598 10.2889912 7.8255173 14.2766097 10.2957033 10.9576811 12.3726975 9.7656647 5.5660419 2.2930173 10.5084975 10.4017956 9.5300614 TCGA-E9-A244 54 0 NA 21 breast stage iia t2 n0 (i-) m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 4 5 1 5 5 1 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.838026e-06 7.282743e-07 13.5135135135135 14.8648648648649 2.7027027027027 40.5405405405405 28.3783783783784 10.4145937 8.6551235 11.3440058 8.0794837 9.3775188 7.2988865 9.4487176 10.9340963 11.1183764 13.9604722 11.0562106 10.2928876 0.3860384 12.4058483 3.6713953 8.0584220 6.9859102 7.8597025 8.6656074 7.8164493 -1.6139616 10.8119996 9.2540479 9.4260949 11.2970144 5.9482387 1.3859832 7.5204230 10.2521167 2.3859832 8.1901279 7.2988865 NA 3.3859970 8.1475484 11.0339050 9.6949047 8.4466929 9.9501464 10.2029806 2.4734492 9.0199004 15.7237147 7.6388276 8.9095589 10.8159267 10.5615465 3.3401919 NA 10.3884604 10.9847473 -1.6139616 11.1911362 6.9821870 4.9251544 6.1997783 10.1889172 11.7596778 10.0221685 11.9835840 12.5204233 8.6725548 11.2659630 10.6836814 10.9728367 10.5085014 3.4303923 13.0327806 9.1516975 4.0007031 9.1079507 9.4214834 1.3913828 3.9095619 11.7895416 10.1421363 10.6359992 9.6087919 4.7610352 6.9558521 12.3862611 11.8976261 9.1714495 9.9657843 1.590800 0.725260 -0.128370 0.931230 0.493190 -0.101160 0.233790 -0.026448 0.061786 0.061786 0.801490 0.977900 0.491470 -0.082941 0.512920 0.512920 0.569160 0.374950 0.031710 0.431410 0.097244 -0.139240 -0.138850 0.427540 0.170450 0.170450 -0.178540 0.135380 -0.444370 -0.142590 -0.087189 -0.133070 -0.805590 -0.795280 -0.795870 -0.495060 0.345500 -0.026448 0.638090 -0.425610 -0.478930 -0.841480 1.238000 0.279620 0.279620 -0.442320 -0.110780 -0.110780 -0.140860 -0.082941 0.101610 0.551590 0.569160 0.422330 -0.412350 0.031710 -0.232520 -0.702090 -0.151320 -0.144260 -0.158630 -0.138850 0.575570 -0.442650 -0.178540 -0.455440 0.114030 0.211760 -0.506320 0.412 0.000 0.526 0.526 0.000 0.000 0.000 0.199 -0.151 -0.126 -0.126 -0.139 -0.139 0.724 0.724 0.032 -0.138 0.000 0.000 -0.320 0.135 0.114 -0.391 0.000 0.000 -0.153 -0.153 -0.116 -0.116 -0.462 -0.462 0.000 0.000 -0.416 -0.416 -0.795 -0.795 0.280 0.280 0.000 0.000 0.412 0.000 0.526 0.526 0.000 0.000 0.000 0.199 -0.151 -0.126 -0.126 -0.139 -0.139 0.724 0.724 0.032 -0.138 0.000 0.000 -0.320 0.135 0.114 -0.391 0.000 0.000 -0.153 -0.153 -0.116 -0.116 -0.462 -0.462 0.000 0.000 -0.416 -0.416 -0.795 -0.795 0.280 0.280 0.000 0.000 8.22991809 -1.61396164 4.26863650 10.35033779 12.31090223 4.93828109 10.59636393 8.74409851 7.53228579 0.38603836 12.00174152 11.47165200 3.14087679 2.19336174 3.14087679 10.21967773 4.90955712 9.41666412 11.44110989 11.76632272 10.37680999 -0.61396164 7.43039066 9.65570816 5.51528037 6.38599696 1.19333020 -1.61396164 11.16694675 4.76103523 8.82166717 8.33728159 5.05842041 10.07766200 11.56170241 2.08644411 8.32116191 -1.61396164 5.90169717 13.03052926 7.58812095 7.36327710 NA -0.02899914 7.18365821 -0.61396164 2.63391939 -0.02899914 5.01535483 1.84542983 0.38603836 10.84849924 5.04421049 12.13460912 10.95869720 10.01079242 4.24398129 8.06723535 11.83978201 7.66676795 1.97096406 3.51528353 10.82945859 1.19333020 4.05842041 1.19333020 3.55592656 14.008604 7.120707 8.920300 12.405848 10.207488 11.268067 7.816449 11.745884 9.646328 11.095081 13.830171 12.341828 10.388460 9.081225 4.955852 8.696610 10.719152 9.767540 11.987187 7.366137 13.968050 8.901697 9.689778 8.923215 6.274741 9.314774 4.614816 4.515277 11.056211 6.993327 2.292900 9.693198 9.906616 8.398817 11.816972 9.813834 9.480734 8.480075 8.669085 6.298886 5.940585 13.142918 9.694905 10.205378 10.237356 12.789342 10.685491 9.724176 9.704540 9.233837 NA 9.448232 7.432521 10.984747 5.861730 11.191136 6.824788 9.909559 10.188917 7.310809 14.771960 10.613613 11.792202 11.768216 10.880603 2.707922 NA 10.107523 8.687493 9.070746 TCGA-E9-A245 47 1 NA NA breast stage iib t2 n1 m0 female 2011 NA no infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 3 1 4 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 1.733986e-07 6.66666666666667 40 0 26.6666666666667 26.6666666666667 10.2719473 9.4308508 11.7394412 9.2785198 8.5951922 8.5083875 11.4044265 9.8503070 9.2436746 13.8291268 8.7474586 10.9038968 2.0821235 12.6107396 4.7066134 10.8667576 7.0517495 8.0324354 9.0421247 13.6218470 4.7450867 13.6339111 4.3045183 10.2894381 10.9673106 7.4744401 -0.5028731 8.4100498 11.0488685 4.0207244 7.2653450 6.2250802 2.6670746 4.1975981 9.5319592 9.8612949 10.9581280 10.5236837 10.0029718 11.1007866 9.9390670 11.0343786 14.4453449 8.9567354 10.7295811 11.9213265 11.0004891 4.4513562 1.8190959 8.8303155 10.2301755 1.0820894 11.1984667 4.4513562 4.4971589 3.8190857 10.3582471 11.8849084 10.3316313 12.4184433 12.7213127 9.2148366 10.7929292 10.7854496 10.4794409 11.1854106 5.3454070 11.6392673 11.1616075 0.4971269 10.6238648 8.7894818 4.0194706 4.7066134 10.3101397 10.2899505 10.8770800 9.1063389 3.6670860 5.5415551 11.6073173 11.3367577 10.1091072 9.3889440 4.5428e-01 4.5428e-01 -7.8863e-03 -9.4046e-03 -8.2521e-03 0.0000e+00 2.7728e-04 2.7728e-04 -6.7813e-03 -6.7813e-03 -6.7813e-03 1.2481e-03 5.1359e-03 5.5459e-04 5.5459e-04 5.5459e-04 -1.1087e-03 -1.1087e-03 -4.1585e-04 -1.8014e-03 -4.1585e-04 -1.5243e-03 -1.5243e-03 -1.5243e-03 -4.7079e-03 -4.7079e-03 -4.7079e-03 -2.7707e-03 1.0798e-05 8.3195e-04 4.3021e-03 -7.8863e-03 -8.2521e-03 -5.2610e-03 0.0000e+00 0.0000e+00 2.7728e-04 2.7728e-04 2.7728e-04 3.3299e-03 7.4147e-04 -6.7813e-03 4.4411e-03 4.4411e-03 4.4411e-03 1.1093e-03 2.5511e-03 6.5262e-03 -8.0244e-03 5.5459e-04 5.5459e-04 5.5459e-04 -1.1087e-03 -1.1087e-03 -1.1087e-03 -4.1585e-04 -1.8014e-03 -1.8014e-03 -4.1585e-04 -4.1585e-04 -1.5243e-03 -1.5243e-03 9.7064e-04 -4.7079e-03 -4.7079e-03 -2.7707e-03 -1.9399e-03 5.5459e-04 5.5459e-04 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.453 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1007866 0.4971269 4.3551432 10.6462722 11.3648251 8.1131577 11.3866642 8.1307368 9.9789698 -0.5028731 12.0919513 11.5580757 11.1783986 2.9565957 3.4040448 8.7139061 7.5793091 9.5872727 11.5412128 10.6919171 9.6795545 1.0820894 8.2352527 10.6102512 5.9234249 3.9565957 1.8190959 1.8190959 9.9494014 7.1553718 11.1810321 8.3551414 5.5415551 10.8212845 10.4010421 5.1118701 8.3644389 1.8190959 6.7163284 12.9196193 9.1026398 7.3173393 1.0820894 2.4971525 8.4513566 -0.5028731 5.1975981 3.8190857 2.9565957 5.2576481 2.6670746 10.0187607 -0.5028731 7.4744401 10.6154524 9.9900149 4.4971589 10.1392120 12.1973832 7.3363637 4.2520447 2.3045110 12.9771931 7.8980396 1.0820894 -0.5028731 1.0820894 12.079385 4.020724 8.964766 12.610740 10.298230 10.614803 13.621847 13.642854 9.317339 10.407053 12.824151 10.513272 8.830316 7.773285 1.819096 7.910788 10.796941 11.1012501 12.9654024 7.9970061 14.5065931 8.8077732 4.7450867 9.3504698 8.5960872 10.2825064 6.0363187 9.8043611 8.7474586 7.9276126 3.6670860 11.4502654 7.1044908 6.6850066 9.2301756 9.4175131 10.8932298 7.7963680 9.7952228 9.9900149 4.7066134 11.9158404 10.9581280 10.6888364 10.2899505 11.3061244 9.5713018 9.7521888 10.5544751 9.4957507 3.1975981 10.4249752 9.8899499 10.2301755 5.2250821 11.1984667 11.0143375 11.6411811 10.3582471 7.1766399 14.0757098 10.7697900 10.3189342 13.2364134 10.1274273 -0.5028731 3.1975981 10.1127899 10.0187607 10.0324356 TCGA-E9-A247 59 0 NA 1186 breast stage ia t1c n0 (i-) m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 2 2 2 1 1 5 1 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.629541e-07 1.733986e-07 31.0344827586207 10.3448275862069 13.7931034482759 31.0344827586207 13.7931034482759 9.6469748 8.1959337 11.5016307 7.7823116 9.4662645 9.5839974 9.4197411 9.7949850 8.7107899 12.6394466 11.8976797 10.2694209 NA 13.0123615 2.5249162 8.7709512 8.5294247 8.8947390 7.8859898 13.5578301 1.7879757 13.8769944 4.4509209 9.8544283 11.0601988 2.7265479 -1.7968615 7.0702745 10.1571917 2.2029818 6.4269977 7.4814451 NA 2.2904539 9.1916801 10.9086277 9.8117122 9.3704134 9.5067761 11.4593514 3.3322783 12.0804712 13.5944403 6.9561787 9.7926465 10.8407523 10.7380276 5.3219353 0.2030132 8.3463785 9.9440408 -0.2120661 10.6863073 3.2029975 4.2904613 4.5780330 9.3438251 12.3939003 10.6407474 12.0325199 12.5759964 8.1888371 11.0103503 10.7562118 11.1313286 10.4321146 3.9578867 11.4153397 12.5332120 -0.7971122 9.9880390 9.3251761 3.7037984 3.0103502 11.0983813 9.7728510 10.6986006 9.4197411 2.0103502 6.6624263 11.9108936 11.4669980 10.2747929 9.8172451 0.3719900 0.3719900 -0.0074720 -0.4086000 0.3869000 0.7470800 -0.0026322 -0.0078863 1.3554000 0.3621500 0.3621500 0.4173100 0.3813800 0.3800600 3.6569000 3.6569000 0.7408100 0.7134000 -0.8442800 0.3875000 -0.8253000 -0.0033243 -0.0033243 0.3787400 -0.0134020 -0.0134020 -0.0134020 1.1115000 -0.3871600 -0.3871600 -0.0140900 0.0000000 0.3708400 0.3623300 -0.4226500 -0.4131600 0.4042700 -0.0162920 0.3782500 -0.9321700 2.1551000 0.3723200 -0.4052800 -0.3926300 0.3577300 0.0029133 0.3813800 -0.8291100 0.3800600 0.3588800 -0.8228500 -0.8228500 0.7408100 0.5855500 0.5855500 -0.7962800 0.3875000 0.3875000 -0.4130000 -0.8498300 -0.4174000 0.3787400 0.0108420 -0.0134020 -0.0134020 1.0913000 -0.3804400 -0.8493100 -0.8715900 0.417 0.417 0.380 -0.443 0.715 0.715 -0.790 0.387 -0.808 1.083 0.272 -0.414 0.379 0.000 0.000 0.000 0.000 -0.015 0.372 1.091 1.091 -0.393 -0.848 0.000 0.000 0.000 -0.409 0.387 0.387 0.000 0.000 0.000 0.000 1.406 1.406 0.362 0.362 0.000 0.000 -0.101 -0.101 0.417 0.417 0.380 -0.443 0.715 0.715 -0.790 0.387 -0.808 1.083 0.272 -0.414 0.379 0.000 0.000 0.000 0.000 -0.015 0.372 1.091 1.091 -0.393 -0.848 0.000 0.000 0.000 -0.409 0.387 0.387 0.000 0.000 0.000 0.000 1.406 1.406 0.362 0.362 0.000 0.000 -0.101 -0.101 8.0978130 0.2030132 4.3322783 9.8829152 11.2516525 8.1562024 10.4173145 7.9581165 7.9110444 0.2030132 11.2579388 11.3769098 4.4883993 4.5067733 2.7265479 8.5506167 3.3322783 9.9176701 11.6247972 10.8716587 9.8951749 6.4556609 8.0993278 9.4935903 4.9309171 6.1158843 -0.2120661 NA 10.1973488 8.8029082 6.4075669 8.0038951 7.4953170 10.0636245 10.5201253 2.2904539 8.9189574 NA 7.7147483 11.4054253 8.4306114 7.3425467 -0.7971122 4.4318168 8.1874139 3.6948468 2.5249162 -0.7971122 2.8468543 4.4513034 1.0103502 10.9849697 NA 7.8665532 10.6542065 10.5215381 3.9309171 8.3010274 13.3346112 6.4509225 2.4509341 3.1571893 11.6643469 2.2029818 NA -0.7971122 3.4883993 15.179135 7.578034 8.823215 13.012362 9.402668 10.796386 13.557830 11.970869 12.900126 10.747718 12.433991 11.040426 8.346379 8.892993 3.984352 7.795453 10.984355 10.8901522 12.2339210 8.7575840 13.5043122 8.7832255 4.4697818 9.5883185 9.2851444 10.2591486 4.2690855 4.3115176 11.8976797 5.6787283 2.2904539 10.4411014 8.0038951 8.1113882 11.4680243 8.7785345 11.2579388 8.3374217 8.8305292 7.2253627 3.6948468 14.5239742 9.8117122 11.1333631 10.8665534 11.4382617 8.4709525 10.1777683 10.3857000 7.2142229 2.7265479 8.9876301 6.7516632 9.9440408 3.6292634 10.6863073 5.3322783 11.0374664 9.3438251 6.3322783 13.2903339 10.1920350 9.8061581 12.5306883 11.1168197 2.6624334 -0.7971122 9.6777152 8.6807537 9.7633282 TCGA-E9-A248 51 0 NA 59 breast stage iia t2 n0 (i-) m0 female 2011 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 3 1 1 2 6 2 9 5 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 3.81477e-07 6.935946e-08 53.8461538461538 7.69230769230769 0 23.0769230769231 15.3846153846154 10.7654459 10.1285822 12.2667304 10.2733497 8.2230470 9.9921631 9.8717094 10.1410444 10.0266009 13.2377233 11.2414898 11.0430738 3.4172584 12.2993415 4.8647111 8.1721419 3.5823151 9.3798873 10.0063095 12.2542609 NA 9.6419869 7.6697766 9.3212273 11.5979169 5.3153742 2.5427781 9.6495661 11.3875781 0.3728407 9.1218914 7.2493771 0.3728407 7.0310720 10.1570860 10.5774313 9.5484097 10.8427563 12.4475870 11.7398653 9.6749277 11.8020053 13.9633595 8.3923118 8.6754991 11.4869278 11.3590577 3.2308486 2.5427781 10.0741666 13.0303461 NA 10.8274165 6.2493771 8.5688473 5.8404658 10.9774134 12.2414898 10.4856254 11.8308822 13.3702161 8.0505795 11.0654756 10.4712048 11.5387093 11.4129786 5.6112639 11.8593181 9.5327315 4.5823151 9.3175723 10.1176940 2.0744027 6.2057502 8.9709126 10.9257693 9.7554842 10.8374059 2.0733061 9.7854299 13.4596598 11.9946831 9.6034811 8.8687152 0.0770380 0.1786400 0.0615880 0.0615880 -0.2116200 0.0076578 -0.0652380 3.5881000 -0.4795900 -0.4531300 0.7063600 -0.1347700 -0.1347700 0.0067433 0.0067433 0.0067433 -0.1980600 -0.0379580 0.2156900 0.1072400 -0.2200300 0.0333470 0.0333470 0.0333470 0.6190700 3.6569000 -0.0156640 3.6569000 0.0770380 0.0770380 -0.0206100 0.0615880 -0.2116200 -0.2116200 0.0076578 0.0076578 -0.0652380 -0.0652380 -0.4592300 -0.1003900 -0.0798010 -0.4648800 0.0084132 0.0084132 0.0084132 0.0344740 -0.1347700 -0.1347700 0.0067433 0.0067433 0.0067433 0.0067433 -0.1980600 -0.0379580 -0.0379580 -0.1665600 0.1072400 0.0682870 -0.2213400 -0.1986200 0.0333470 0.0333470 -0.2275400 -0.2191600 -0.0156640 0.1169000 -0.1141000 -0.1658700 -0.1735300 -0.135 -0.135 0.000 0.000 0.000 0.000 0.216 0.000 -0.221 -0.176 -0.176 0.000 0.000 -0.230 -0.230 3.657 3.657 0.000 0.000 0.117 0.117 -0.114 -0.166 0.000 0.000 0.000 0.000 -0.212 -0.212 0.000 0.000 -0.262 -0.262 -0.100 -0.100 -0.453 0.253 0.000 0.000 0.000 0.000 -0.135 -0.135 0.000 0.000 0.000 0.000 0.216 0.000 -0.221 -0.176 -0.176 0.000 0.000 -0.230 -0.230 3.657 3.657 0.000 0.000 0.117 0.117 -0.114 -0.166 0.000 0.000 0.000 0.000 -0.212 -0.212 0.000 0.000 -0.262 -0.262 -0.100 -0.100 -0.453 0.253 0.000 0.000 0.000 0.000 7.94461251 NA 4.10078427 9.14929316 11.51895145 4.48138291 9.61662915 10.08337388 10.99303411 -0.04215967 12.01163540 11.41996018 8.88560060 NA 3.83229256 8.40765909 4.81580595 11.12377643 11.43068268 10.40007506 9.30433626 NA 8.68914153 9.68574309 8.83126670 4.73041171 7.05936069 NA 10.77213804 4.25550073 6.37848388 9.02928502 6.30359812 9.62411168 10.68772656 5.07330183 8.47089229 1.37284069 7.38688077 12.30931403 7.92168208 5.56268509 -1.62727073 8.02031829 7.88856001 4.74789757 1.18021153 5.40628155 8.64548984 3.54438647 4.52260821 10.56823233 -0.62704790 9.25855661 10.46528692 10.16076266 6.46561701 10.88806717 14.00028001 9.70545614 7.06634756 4.97277076 10.20693608 -0.62704790 1.83228244 2.76517403 5.18021551 9.011766 11.592634 8.233947 12.299341 10.673164 10.395921 12.254261 8.207331 9.699290 11.047273 13.277824 9.722141 10.074167 8.038196 1.694791 8.386881 12.705946 11.205750 11.737405 6.350140 13.616888 9.269193 8.908136 8.820976 10.029732 10.893275 8.226170 7.255504 11.241490 7.389668 2.372869 11.659418 3.957822 9.119148 12.130042 11.034193 11.147029 8.261603 8.039972 9.797551 10.792820 11.238000 9.548410 10.829984 9.681768 10.481385 9.793873 9.606480 10.934387 9.565769 NA 9.780542 9.970643 13.030346 10.726558 10.827416 6.100780 11.099025 10.977413 8.281253 13.840049 10.482364 10.852388 12.952117 10.447336 6.969050 6.662879 11.488554 10.975791 10.193438 TCGA-E9-A249 45 0 NA 217 breast stage iia t2 n0 (i-) m0 female 2011 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 1 5 2 4 4 5 5 4 3 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 1.733986e-07 28.5714285714286 21.4285714285714 7.14285714285714 28.5714285714286 14.2857142857143 11.05459496 9.73713206 11.53874349 8.50654284 8.67704905 9.39285189 9.98552875 9.99637194 8.92654122 12.21708712 11.03169603 10.39228576 5.92262603 13.15014798 4.91002745 9.15861953 7.06012955 8.32980172 10.80207630 12.96545133 1.39906169 14.42614087 5.26695890 9.50116603 11.11227887 4.36254002 -1.92303052 8.72156030 9.54270263 2.72100073 8.21156225 8.35790692 NA 2.88450024 10.15428561 10.25953049 10.86033907 11.02769206 9.94441485 11.21476777 2.53657516 12.47801560 14.00817371 8.37485474 8.99972045 11.41893292 11.11227887 4.12152937 -0.33788567 8.92810438 11.48068081 -0.33788567 11.14641810 2.98402419 5.39001758 4.07713189 9.66819094 12.23850428 10.97724822 13.50611782 12.59701807 7.54270224 11.36888242 10.89048644 10.86544664 10.62619882 4.80505508 12.05923845 11.01432607 0.07710624 9.94865647 9.21796593 3.57507025 4.67705151 11.66221605 10.25362096 10.26726951 9.88851085 1.53655030 11.11828191 13.01478583 11.66151149 10.08696471 9.01671526 1.0874000 1.0838000 0.0094491 0.0094491 -0.3063900 0.2231400 -0.3170400 -0.3170400 0.0033299 0.0033299 0.0033299 0.0047190 0.0087528 0.1416200 0.1416200 0.1416200 0.0000000 0.0000000 -0.3076800 -0.0687970 -0.3232100 -0.0220580 -0.0220580 -0.0220580 0.2283900 0.2283900 0.2283900 0.4183100 -0.3168100 -0.3068600 -0.2947300 0.0094491 -0.3292100 -0.3206400 0.2231400 0.2231400 -0.3170400 -0.3170400 -0.3170400 0.2816900 0.2785300 0.0033299 -0.0667880 -0.0667880 -0.0667880 -0.0667880 0.0087528 0.0087528 0.1416200 0.1416200 0.1416200 0.1416200 0.0000000 0.0000000 0.0000000 -0.3076800 -0.0687970 -0.0687970 -0.3232100 -0.6081500 -0.0220580 -0.0220580 0.2476200 0.2283900 0.2283900 0.4183100 0.0045800 -0.6761900 -0.6761900 0.000 0.000 0.142 0.142 0.000 0.000 -0.308 0.000 -0.323 0.145 -0.656 0.000 0.000 0.248 0.248 0.228 0.228 0.777 1.084 0.418 0.418 0.000 -0.676 -0.295 -0.295 0.000 0.000 -0.306 -0.306 0.223 0.223 -0.317 -0.317 0.282 0.282 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.142 0.142 0.000 0.000 -0.308 0.000 -0.323 0.145 -0.656 0.000 0.000 0.248 0.248 0.228 0.228 0.777 1.084 0.418 0.418 0.000 -0.676 -0.295 -0.295 0.000 0.000 -0.306 -0.306 0.223 0.223 -0.317 -0.317 0.282 0.282 0.000 0.000 0.000 0.000 0.000 0.000 8.02550337 NA 4.50339962 10.47801562 11.94431836 6.93309457 11.20738495 7.38310636 8.59834399 NA 11.45013719 11.00602643 2.32506975 3.28658548 2.93512025 8.70375791 3.32506975 10.00750388 11.34187198 10.99226858 9.74557803 8.31315015 8.14457056 9.88408854 5.56898973 3.24706164 -1.92303052 NA 11.17055373 2.72100073 6.11605487 8.28048406 4.14322197 9.90718391 11.25362102 -0.92275700 8.80165017 0.07710624 8.79908990 12.41649906 8.57199187 6.19607782 NA 0.39911639 8.65739456 NA 2.53657516 -0.92275700 4.72098979 5.20662369 1.24707683 10.60216752 NA 6.74247248 10.31583938 10.07396265 5.50339962 8.46730516 12.65957221 7.30595502 3.28658548 3.12152937 11.12715483 2.39906169 NA 2.39906169 0.39911639 13.266642 5.953654 8.998977 13.150148 10.177470 11.507589 12.965451 12.048231 9.515928 10.862384 13.760323 11.361960 8.928104 8.856035 -1.923031 7.733561 11.158453 10.970058 11.732890 8.126985 13.199599 9.258910 5.399065 9.313150 9.375199 10.364430 5.805058 8.665851 11.031696 5.452177 5.469453 11.019651 6.434688 7.675896 11.429455 10.493406 10.767134 9.481746 8.851923 11.516318 4.452174 12.264985 10.860339 10.541682 10.173192 10.609979 9.134451 10.532463 10.602657 9.437435 -1.923031 9.473195 7.129107 11.480681 4.226886 11.146418 7.631725 10.563192 9.668191 7.383198 14.283903 9.817338 10.617749 13.169563 11.073610 2.662092 -1.923031 9.980265 10.407773 10.179112 TCGA-E9-A24A 69 0 NA 747 breast stage iia t1c n1 m0 female 2011 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 3 5 2 2 4 1 3 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 0 25 12.5 0 25 37.5 11.3452276 10.2999497 11.6613560 10.0563491 8.6550634 9.7046526 10.5145241 10.0900886 8.7566014 12.7617820 11.6425304 10.4660939 1.0701145 11.9760250 3.9066020 9.1453888 5.2285301 8.5981363 10.8283241 13.5161133 0.8476763 13.5369420 6.1453881 9.4982337 10.4528792 7.0797290 -0.7372061 9.7887560 10.3268149 2.8477164 7.3342080 7.8756142 NA 4.5665290 10.3748595 11.4636445 10.8700762 12.4712851 10.4673171 11.0530944 1.0701145 11.8714627 13.9451370 9.2328231 8.9431055 11.7952236 11.7869203 3.6202931 1.5846739 9.4703703 11.8430045 -0.7372061 11.3458928 4.8626597 7.0604074 4.6550656 11.1741379 11.9309661 10.4873506 12.6393461 13.3494627 8.0813279 11.0459488 10.9385640 11.6436128 11.4271815 5.2169437 12.2133929 10.6114740 -0.1523237 9.8760750 9.2500099 3.0711277 6.8326014 10.5860822 10.8841110 9.9106540 10.4077227 2.8477164 8.3686544 12.4300072 11.7485752 9.6577445 9.4544221 9.2825e-01 9.2825e-01 -2.9946e-03 -2.9946e-03 -6.4001e-04 6.0231e-03 -2.7177e-03 -1.0180e-02 1.0896e-02 1.0896e-02 -2.6877e-03 4.0774e-03 4.0774e-03 5.7451e-03 5.7451e-03 5.7451e-03 1.2290e-02 0.0000e+00 -2.1639e-03 8.8500e-04 6.1622e-03 1.3127e-02 1.3127e-02 1.3127e-02 1.9136e-02 1.9136e-02 1.9136e-02 1.4383e-02 1.2649e-02 -1.2155e-02 -8.6367e-03 -2.9946e-03 -6.4001e-04 -6.4001e-04 -1.1041e-03 -1.1041e-03 -2.7177e-03 -2.7177e-03 -1.0180e-02 5.0470e-01 -5.3201e-01 1.0896e-02 7.5155e-05 7.5155e-05 7.5155e-05 1.7038e-02 4.0774e-03 4.0774e-03 5.7451e-03 5.7451e-03 5.7451e-03 5.7451e-03 0.0000e+00 0.0000e+00 0.0000e+00 -2.1639e-03 8.8500e-04 8.8500e-04 6.1622e-03 -5.2773e-01 1.3127e-02 1.3127e-02 -1.0557e-03 1.9136e-02 1.9136e-02 1.4383e-02 2.6888e-03 -5.3120e-01 -5.3120e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.533 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.923 0.000 0.000 0.000 -0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.505 -0.532 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.533 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.923 0.000 0.000 0.000 -0.531 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.505 -0.532 0.000 0.000 0.000 0.000 0.000 0.000 8.3933167 NA 6.0956354 9.7480721 10.7321333 6.3749769 10.8827366 8.8992346 8.6572087 NA 12.0086303 11.3629039 3.3502143 NA 3.7545989 8.3528583 5.2627451 10.4957663 11.5648136 11.5603787 9.2074580 7.1786250 7.8401749 9.8774558 5.9422259 1.7221600 1.5846739 NA 11.3224283 3.8477063 6.4226165 7.7843463 3.9906645 9.8655329 11.1361900 5.4819156 7.4301640 NA 8.7655778 11.7523430 9.3368874 7.7625920 -1.7374466 2.7863036 8.7525937 -1.7374466 3.8477063 -1.7374466 4.5665290 6.1001850 2.1696364 9.6555999 1.0701145 6.8401749 10.6761094 9.7902229 4.3920289 9.8182936 13.3854930 8.8326014 3.8477063 3.5846739 12.1086279 4.6721368 NA 2.3502143 0.5846739 14.4764480 5.2627451 8.4673170 11.9760250 10.8011967 10.9016343 13.5161133 13.0365033 9.3272663 10.9415661 13.5042077 8.3971723 9.4703703 9.4029366 0.2627939 7.9649184 12.0103095 10.644289 11.618372 6.620298 13.473987 9.545255 5.510674 8.854268 8.376488 9.976257 7.950996 7.650763 11.642530 6.323442 4.145392 12.139167 6.920958 7.066522 11.093855 10.135805 11.197358 8.585801 7.642124 13.032222 5.004214 13.059287 10.870076 10.666557 9.413128 11.974090 9.156806 10.618923 10.696853 9.708278 NA 9.165777 8.604020 11.843004 2.262734 11.345893 8.502345 10.368654 11.174138 7.713957 13.439237 10.529532 10.850289 13.167757 9.166628 NA NA 10.630161 11.231413 10.377790 TCGA-E9-A295 71 0 NA 375 breast stage iia t2 n0 (i-) m0 female 2011 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 2 4 3 1 4 4 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-06 4.508365e-07 22.2222222222222 26.984126984127 7.93650793650794 28.5714285714286 14.2857142857143 9.77321390 9.73529911 11.34939160 8.65547885 9.20841264 8.56823204 10.14337199 9.56087140 9.89529050 13.87716162 11.42608650 10.61961751 -0.05020363 12.78836118 2.85674671 10.22829610 8.72133609 9.03730946 10.23640436 12.81509659 0.94987106 13.17746255 5.59370335 9.80595309 11.45392073 4.37610976 NA 11.23833493 10.89967330 3.34217070 9.78589690 7.25362722 2.27178421 5.21663335 9.39692989 10.00716144 9.36558844 9.85898960 9.51304279 10.77201908 0.53485845 10.84580051 14.05415870 7.78640229 9.70473418 11.05837109 10.77201908 4.34216358 5.56455499 8.68962729 10.46997417 NA 11.15502893 6.62932602 4.97221474 4.15929818 9.14951901 12.10703562 10.59325189 11.12477232 12.28118346 8.84920366 10.31069366 10.18944518 10.86497902 10.61651448 4.99424028 11.07040852 11.08138211 2.53480866 10.46997417 9.26272959 3.95030043 4.27177674 10.42101370 9.29746795 10.22713396 9.99492361 3.47341028 8.57555551 12.45329970 11.72071693 9.50922375 9.55532613 0.6510900 0.6510900 -0.3535200 -0.0106650 -0.0022356 0.3450000 0.1707400 0.1707400 1.0076000 1.0076000 1.0082000 0.1024700 -0.2271300 0.7554500 1.5865000 0.5873700 0.3123900 0.3157200 -0.3484900 0.7173200 -0.3665900 -0.3898600 0.3018100 0.3018100 0.2108300 0.2108300 0.2108300 0.5402800 -0.3880700 -0.3536300 -0.0091474 -0.3535200 -0.0077669 0.0097087 0.3276700 0.3276700 0.1707400 0.1707400 -0.0103890 0.6778700 -0.0179600 1.0076000 -0.0146600 -0.0146600 -0.3555700 -0.0186460 0.1291600 0.1291600 -0.3823600 1.7614000 -0.7054200 -0.3814700 0.3123900 0.3157200 0.3189700 -0.3676500 0.7173200 0.7173200 -0.3665900 -0.7714200 -0.3898600 0.3018100 -0.3510100 -0.4345400 0.2108300 0.5402800 -0.3527200 -0.0308320 -0.0308320 0.102 0.102 0.000 -0.354 0.312 0.312 -0.348 0.717 -0.367 0.294 -0.361 -0.390 -0.088 -0.351 -0.351 0.211 0.211 -0.354 0.297 0.540 0.540 0.000 0.000 0.000 0.000 -0.354 -0.354 0.000 0.000 0.328 0.328 0.171 0.000 0.678 0.678 1.008 1.008 0.000 0.000 0.000 0.000 0.102 0.102 0.000 -0.354 0.312 0.312 -0.348 0.717 -0.367 0.294 -0.361 -0.390 -0.088 -0.351 -0.351 0.211 0.211 -0.354 0.297 0.540 0.540 0.000 0.000 0.000 0.000 -0.354 -0.354 0.000 0.000 0.328 0.328 0.171 0.000 0.678 0.678 1.008 1.008 0.000 0.000 0.000 0.000 8.16173504 0.53485845 5.71803003 10.57692446 11.77400984 6.60798715 11.37375037 9.37778793 9.56010562 5.47340703 11.41311554 12.05949447 3.94984305 1.27178421 2.85674671 8.11726491 2.94985238 10.24159294 11.10054592 10.68413285 9.34752127 4.30739938 7.52727525 9.94136840 6.41745255 7.91851325 5.44169926 NA 10.17565658 7.50059334 8.03730918 8.34430923 6.45764190 9.90027135 9.79062446 3.11977116 8.56455651 0.94987106 7.51208938 12.73621835 8.00241449 8.21428900 NA 5.07913060 8.15441764 -1.05020363 5.60805814 -0.05020363 5.21663335 4.85673676 1.94983371 10.88169215 -0.05020363 8.54603630 10.54323777 10.11977155 6.28076335 9.62050284 11.73345878 8.53104726 1.75719397 4.34216358 12.13084354 1.75719397 -1.05020363 2.40928231 2.85674671 14.2356220 5.9156308 8.5025156 12.7883612 9.6008982 10.6160707 12.8150966 10.5149487 9.2804386 10.5135196 12.8544812 10.7878687 8.6896273 8.6098425 0.5348585 7.5645565 11.0733214 11.1449112 12.8969356 7.7604186 13.4583836 8.3464512 8.1172649 9.8454218 8.3378640 10.0223946 5.8324901 7.7279239 11.4260865 5.0159346 2.8567467 10.5427707 5.9942403 6.0041530 10.6142939 10.0037726 11.0583711 9.2785215 8.8217520 10.3145284 5.9156308 13.9080749 9.3655884 11.7732139 11.1436800 11.1384355 10.2869109 9.9701321 10.5465023 8.0132417 9.1482918 8.4970882 7.9691315 10.4699742 4.8078289 11.1550289 4.1977711 11.1405972 9.1495190 6.7113972 13.8823382 9.7547843 9.5478992 12.2355378 10.1033986 0.9498711 -1.0502036 9.6231558 10.0957787 9.0531344 TCGA-E9-A2JS 72 1 904 NA breast stage iib t2 n1 m0 female 2011 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 1 2 2 2 1 1 1 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.456549e-06 6.242351e-07 35.4838709677419 11.2903225806452 6.45161290322581 40.3225806451613 6.45161290322581 9.4306760 9.8855144 11.1573722 9.5389288 9.2040737 8.5601647 9.5132983 9.3128548 9.9919039 13.1692981 11.5809305 10.4143700 0.0483757 13.4144156 5.3089396 9.3245366 7.8297722 8.3808216 5.3214303 12.8005140 2.1638851 13.2938659 0.4634132 9.8007149 11.3643165 5.4858164 0.4634132 10.7372453 10.7234871 1.7853832 8.5442671 6.1499503 -0.5365868 2.3703317 9.5940204 10.6296128 9.4008235 9.3852906 9.0161188 10.9848048 3.8557705 9.7511621 14.1122005 8.4789067 9.7401557 10.9793959 11.5190711 4.8728386 6.7534682 8.3597821 9.6112906 -0.5365868 10.2002744 5.4176466 5.0781615 4.6333731 9.9037998 12.0016386 10.5136385 11.5325637 12.1779099 8.1127059 10.2468572 9.8042011 11.0213920 10.9203174 4.8032994 11.5786560 11.3061929 NA 10.4930821 9.8094093 2.9913903 5.4292343 10.0117900 9.9366481 11.2312203 10.7865045 3.7113738 9.0389889 11.0760879 10.2287359 9.8027430 8.7418991 0.4181400 0.4181400 0.2028900 -0.0056757 0.8241200 -0.5069100 0.0072217 -0.2895200 3.6569000 2.4263000 1.5727000 -0.0200010 -0.4263700 3.6569000 1.9131000 1.8520000 0.4051100 0.4051100 0.0030522 0.3989400 0.7562400 -0.4301800 0.7984000 1.6038000 -0.1196500 -0.1196500 0.6922300 0.4176400 -0.4221100 0.4181400 -0.0264410 -0.4322500 0.4359800 -0.9149200 -0.4481400 0.4121200 0.0134920 -0.2895200 -0.2895200 0.0956530 0.0956530 -0.4498600 -0.3275100 0.0955510 -0.0063668 0.0203430 -0.4263700 -0.4056200 -0.4455500 -0.4464200 -0.0131270 1.2533000 0.4051100 0.4215000 0.4036100 -0.0073339 -0.4318100 -0.4318100 -0.0865180 -0.4182700 -0.4301800 0.7984000 -0.4114600 -0.1196500 0.6922300 -0.0469890 0.3850200 0.0319990 -0.4073800 0.000 -0.386 0.000 0.000 0.405 0.405 0.000 -0.432 0.000 0.727 -0.188 -0.430 1.604 -0.426 -0.426 -0.120 -0.120 -0.004 0.418 0.418 0.418 0.385 0.000 0.410 0.000 -0.427 0.000 0.000 0.000 0.000 0.404 -0.441 -0.441 0.000 0.000 1.521 1.971 0.000 0.000 0.126 0.126 0.000 -0.386 0.000 0.000 0.405 0.405 0.000 -0.432 0.000 0.727 -0.188 -0.430 1.604 -0.426 -0.426 -0.120 -0.120 -0.004 0.418 0.418 0.418 0.385 0.000 0.410 0.000 -0.427 0.000 0.000 0.000 0.000 0.404 -0.441 -0.441 0.000 0.000 1.521 1.971 0.000 0.000 0.126 0.126 8.2529833 4.1638932 4.4858197 10.0079313 12.3397748 7.1828045 10.7261319 7.8064356 9.1702739 -0.5365868 12.6821643 11.6433743 4.9063952 -0.5365868 3.5509130 7.8536190 3.8557705 10.4941169 10.9697573 10.4680213 9.6976684 3.3214375 7.6946706 9.5098916 5.6131957 6.7349128 1.2708279 -0.5365868 9.6532743 7.1981592 6.2448091 9.2299786 5.4292343 10.7755754 9.8231992 -0.5365868 9.9006816 -1.5365868 7.1569366 11.6531199 9.2796333 7.0103446 -1.5365868 6.4802587 8.0707800 -0.5365868 2.9870116 -1.5365868 3.8897169 5.8995793 2.6333847 10.7413182 -0.5365868 6.2448091 9.2074427 10.0328307 4.0180377 9.4169187 13.2622759 7.1673529 3.3214375 2.6333847 12.2557316 10.8778707 NA 0.4634132 -0.5365868 15.171224 7.006482 9.202386 13.414416 9.816597 11.025454 12.800514 12.587167 10.627008 10.535917 12.042530 10.901982 8.359782 7.491356 1.270828 8.008414 11.167786 11.3504799 11.8003746 7.6308677 13.4899295 8.1673534 4.5719741 9.6245816 9.9608026 9.8623269 6.5349114 8.4000874 11.5809305 7.3582679 -0.5365868 9.9228814 5.7302351 8.4952886 10.2554265 9.9396895 9.9136299 8.0991858 9.6093819 9.9330915 4.3703387 11.3772909 9.4008235 9.7949266 9.5830393 11.7039429 8.9573052 10.7834040 10.6311814 9.1278971 1.2708279 9.6282623 6.5653733 9.6112906 3.3214375 10.2002744 7.3673317 10.8786633 9.9037998 7.7966049 13.1380834 10.1127059 10.1354330 12.3217222 9.9233936 -1.5365868 NA 10.7881928 9.5023686 9.8828833 TCGA-E9-A2JT 63 0 NA 288 breast stage iia t2 n0 (i-) m0 female 2011 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 4 3 6 4 4 3 6 2 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 3.467973e-08 0 100 0 0 0 11.1568959 10.1068131 12.0886306 10.2991107 8.6494649 10.3718537 9.7346808 10.5343056 9.7934307 11.7244511 11.2483543 11.0011091 1.0871912 10.7830307 4.8241874 9.0472243 5.2571464 9.4106525 7.7549256 10.9545012 NA 12.3001240 6.6212006 9.5810512 9.1693714 5.2571464 NA 12.9772333 8.8309347 4.0872252 9.9729188 7.4909447 NA 6.4447747 10.4083990 10.3555695 9.3602409 11.9928601 10.2546406 11.8261591 8.6746873 9.4809703 15.0643234 9.0880674 9.7286360 11.6117641 10.7812900 5.4329961 2.3096128 9.4937818 11.9691011 NA 11.1790985 6.0100547 9.1334369 4.7117151 10.6107844 12.0142596 10.3547894 11.0989156 13.1881037 6.4447747 10.5336165 10.6791374 11.4593619 11.9563021 5.5246279 11.7507805 9.8498812 0.5022287 10.3477499 9.3940435 4.5931147 7.7549256 10.8088912 10.2613158 10.4615375 10.4484352 3.5022542 8.2901626 13.2096190 12.4100895 9.9534710 9.4966133 0.05039200 0.05039200 0.00069327 0.00069327 -0.00926000 -0.00097017 0.00444110 0.00444110 0.30729000 0.30729000 0.00044528 0.00402430 0.00402430 0.00305220 0.00305220 0.00305220 0.00499690 -0.00055444 -0.00705760 -0.00304750 -0.00843850 -0.04983000 -0.04983000 -0.04983000 0.01363200 0.01363200 0.01363200 0.00583090 -0.01354000 -0.00567570 0.00000000 0.00069327 -0.00705760 -0.01240900 -0.00097017 -0.00097017 0.00444110 0.00444110 0.00444110 0.00055459 0.00055459 -0.05725000 -0.00138580 -0.00138580 -0.00138580 -0.00138580 0.00402430 0.00402430 0.00305220 0.00305220 0.00305220 0.00305220 0.00499690 -0.00055444 -0.00055444 -0.00705760 -0.00304750 -0.00304750 0.00208050 -0.04102400 -0.04983000 -0.04983000 -0.04807200 0.01363200 0.01363200 0.00583090 -0.05864800 0.00249690 0.05850900 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.1169698 6.6920840 5.7690470 10.1197273 11.0687897 6.9741794 11.0399637 11.4012656 9.3495365 -0.4977713 11.7101894 11.1287766 3.2026998 2.0872252 4.2571464 8.5134872 4.0872252 11.6523245 11.2199363 10.2147869 8.5575422 4.0258261 8.4823994 10.5936953 11.2466733 8.8421099 NA NA 12.1494935 6.9779931 8.1058865 7.9031395 6.0721165 11.2203304 10.7847692 7.2901626 9.0796888 NA 8.4937818 12.9707567 9.8128726 7.9201122 1.0871912 4.4091533 8.2061636 NA 4.4091533 NA 9.6858953 5.3374257 6.9116508 10.7620032 NA 9.0984496 10.4226127 9.7141481 8.5466541 12.3110230 14.0082575 9.0140127 7.2437271 7.0872220 10.2000963 0.5022287 NA 0.5022287 1.8241976 11.883240 5.928524 8.485253 10.783031 10.785348 10.089100 10.954501 10.720823 9.335150 11.258816 13.217364 9.706831 9.493782 7.263811 2.672176 7.524628 11.616328 11.022879 12.020421 4.546654 13.186128 9.311224 10.284439 9.301541 8.156896 10.442698 11.250872 9.626381 11.248354 5.692084 3.672188 11.197488 5.056848 8.228376 10.056849 12.291997 10.030714 7.740665 8.584409 11.530857 11.048672 11.364742 9.360241 10.794006 9.870766 10.685275 11.376473 10.519068 11.037535 9.111439 7.195747 10.457830 8.470754 11.969101 11.796306 11.179099 4.456458 11.271271 10.610784 8.595017 14.426052 10.037535 10.786506 12.389481 11.397078 10.570366 6.977993 10.596997 10.225067 10.177335 TCGA-E9-A3HO 49 0 NA 1158 breast stage iia t2 n0 (i-) m0 female 2011 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 1 5 2 4 1 NA NA NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.595268e-06 2.774378e-07 3.63636363636364 14.5454545454545 7.27272727272727 45.4545454545455 29.0909090909091 10.9007172 8.7470228 11.3739129 7.3777892 9.7385363 8.8918156 10.3460195 10.1583536 10.2073516 7.3483449 11.7508958 10.0052307 3.1407459 12.9083037 3.2719933 9.2322482 8.2562271 8.0081759 7.5590038 12.8169588 2.2078616 14.5041285 1.7484183 10.5003069 10.2307362 5.8777148 1.7484183 9.4991393 9.4983017 2.9963526 7.8905397 5.5428492 -0.2515388 4.0703636 8.7887222 9.5844826 8.7342744 9.6508075 10.2201075 10.4265924 13.6926869 11.8965911 13.9410720 7.9313232 9.9826511 10.8262495 9.9880309 4.9183576 NA 8.4349330 10.2119568 -1.2515388 10.0737378 3.8777148 5.5033201 4.2402838 9.1641741 12.0852179 10.3035007 10.4070901 12.1046092 5.7928267 11.1407498 10.8401983 10.1342948 11.1076329 3.1407459 11.2117013 7.5133036 6.9868375 10.1929297 8.7666326 5.5825861 4.3030209 11.2875912 10.2032457 10.3001407 9.5338849 2.8359039 7.6187973 11.3101976 10.3163885 10.3272768 9.7413707 0.19390000 0.93142000 0.03411300 0.01852300 -0.81958000 0.77340000 0.62606000 0.33060000 0.02244400 0.02244400 0.03538300 0.00069327 0.01810300 -0.37673000 0.01000600 -0.39408000 -0.00387790 -0.00387790 0.48475000 -0.81143000 -0.41926000 0.02763800 0.02763800 0.02763800 -0.02903800 -0.02903800 -0.03694600 0.04599100 -0.38302000 -0.38917000 -0.31247000 0.01852300 -0.18999000 -0.81958000 0.01642500 0.01642500 0.62606000 0.33060000 0.01307400 0.36608000 -0.42375000 0.02244400 0.12255000 0.12255000 0.12255000 0.01740400 -0.36488000 -0.86693000 -0.38078000 0.01000600 -0.82252000 -0.82252000 -0.00387790 0.00736090 0.00805670 -0.81565000 -0.81143000 -1.27310000 -0.38190000 -0.81565000 -0.82130000 0.02763800 0.37101000 -0.02903800 -0.82187000 -0.40196000 -0.04007300 -0.38627000 -0.21639000 0.000 0.000 -0.394 -0.394 0.000 0.000 0.000 -0.811 -0.419 0.000 -0.796 -0.821 0.000 0.000 0.365 0.000 0.000 -0.383 1.385 0.000 0.000 0.000 -0.386 -0.776 -0.349 0.000 0.000 -0.190 -0.820 0.816 0.000 0.613 0.000 0.366 -0.397 0.000 0.000 0.123 0.123 -0.346 0.000 0.000 0.000 -0.394 -0.394 0.000 0.000 0.000 -0.811 -0.419 0.000 -0.796 -0.821 0.000 0.000 0.365 0.000 0.000 -0.383 1.385 0.000 0.000 0.000 -0.386 -0.776 -0.349 0.000 0.000 -0.190 -0.820 0.816 0.000 0.613 0.000 0.366 -0.397 0.000 0.000 0.123 0.123 -0.346 0.000 8.8305814 -0.2515388 6.1746980 11.5519581 11.8759431 8.9053623 11.2216307 8.4764040 9.8559961 1.5557671 11.4566541 11.5274540 9.8378829 2.5557916 2.2078616 7.6672954 3.3333951 10.5825083 11.3343339 9.9045154 9.8589156 2.5557916 8.9820521 10.2042733 7.1535743 3.9963616 0.7484612 NA 9.9333077 7.9963599 4.9772524 7.3144863 6.2241657 11.2819787 10.2996600 3.1407459 10.0198954 NA 6.5166172 12.8065087 9.8969089 9.5573965 NA 7.1788849 9.9657843 -1.2515388 3.3333951 -1.2515388 6.4488729 4.3384957 2.4488745 10.8232429 -1.2515388 7.4898993 11.3679646 8.9975459 5.4763525 9.7142167 12.5068638 7.5654159 4.2078616 4.1059881 10.7880369 4.4208596 NA NA 0.3334237 9.909810 7.773572 7.781855 12.908304 10.480600 11.005820 12.816959 12.198999 8.607967 9.747023 11.592550 10.313534 8.434933 8.586060 2.996353 8.101579 10.519509 11.051357 11.547309 6.631075 12.389235 8.333395 6.536334 9.573391 9.623414 11.179481 7.074862 6.529793 11.750896 10.899449 4.105988 9.107084 5.174698 9.528677 9.953004 9.792827 8.914595 8.012875 10.238782 8.967601 5.333395 12.243139 8.734274 10.053924 10.841850 10.589210 9.437557 10.044775 11.081588 7.337147 NA 8.926076 7.906461 10.211957 5.462677 10.073738 7.392288 11.096607 9.164174 7.523219 13.926864 10.293880 9.760359 12.011848 11.687093 2.918348 -1.251539 9.918357 7.965178 10.419973 TCGA-E9-A3Q9 78 0 NA 1001 breast stage iiic t3 n3 m0 female 2011 NA no infiltrating lobular carcinoma 22 white not hispanic or latino NA NA 3 1 2 2 6 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 2.427581e-07 10 16.6666666666667 10 33.3333333333333 30 11.3646396 9.6420024 11.4355787 9.3198979 8.7805322 8.6987488 9.9880088 10.1098792 9.5251717 12.7749109 10.0888025 10.8103582 2.4521737 11.7453211 5.0542147 9.7428551 7.8395798 8.2958745 8.9857859 13.1894253 3.1683853 13.5507270 NA 10.1387585 9.9388693 5.3862902 NA 9.9700272 11.6409434 1.8147555 7.4934456 8.0939716 NA 5.0710890 9.7369194 10.5899010 10.4034627 11.0457025 9.8567112 11.3663495 6.2447368 11.3597124 14.2494341 7.0261494 10.1276310 11.5539661 10.9602556 3.2886834 2.3452544 8.4950099 11.1182751 -1.3551285 11.3769904 4.5755604 6.6727294 3.7741018 10.9197835 11.9283455 10.2913817 11.7297975 12.7627907 8.3452629 10.6623274 11.0108720 11.1560815 11.2898059 4.6221045 12.0862110 10.8109861 NA 10.3048189 8.9520239 3.3491388 6.1446684 10.0944876 10.4042952 10.3030344 9.4713714 0.9667258 5.2741796 12.8500817 12.0496985 9.3556295 9.5726009 0.61863000 -0.00221680 0.00597000 0.00597000 0.00471900 0.00000000 -0.00171680 0.00388540 -0.00097017 -0.00097017 -0.00097017 -0.00277070 -0.00277070 0.00069327 0.00069327 0.00069327 -0.00304750 -0.00304750 -0.03667400 -0.00193990 0.00055459 -0.00918190 -0.01684100 -0.01684100 -0.01587900 -0.01587900 0.00055459 -0.00512270 -0.00512270 -0.00512270 0.00485790 0.00597000 0.00471900 0.00471900 0.00000000 0.00000000 -0.00171680 0.00624810 0.00750000 0.00055459 0.00055459 -0.00622860 0.00597000 0.00235810 0.00235810 0.00069327 -0.00277070 -0.00277070 0.00069327 0.00069327 0.00069327 0.00069327 -0.00304750 -0.00304750 -0.00304750 -0.03667400 -0.00193990 -0.00193990 -0.00815270 -0.00346270 -0.00918190 -0.01684100 -0.00152430 -0.01587900 -0.01587900 -0.00512270 -0.05590300 -0.01354000 -0.01642900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.627 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.627 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6377613 NA 5.6335068 10.8736417 10.8745431 8.4485182 11.5742664 9.0984948 9.2079431 -0.3551285 11.9848122 11.4325583 3.0371362 3.9302264 3.9667535 8.0877667 4.3727432 10.4561977 11.2533089 10.7999575 9.0349920 8.8072142 8.3539068 9.9446034 6.7792492 8.8321751 NA NA 10.7734618 7.4650023 4.9846714 7.8784427 5.3727432 10.9190322 10.4638045 6.0794506 8.1164984 -1.3551285 7.9531622 12.6638924 9.2549251 8.2886792 2.5517129 2.8147555 8.1225811 -0.3551285 3.0371362 NA 5.6106085 5.1994132 4.1683853 9.7945702 NA 8.3642117 10.3701892 9.5799881 4.8346455 10.2108771 11.8010641 8.7983749 3.0371362 3.1042528 11.0869890 0.2298340 0.2298340 3.7741018 1.8147555 12.5083066 3.8927504 8.8951214 11.7453211 10.5972002 10.2222519 13.1894253 11.1098792 9.2703949 10.3951112 12.8073717 10.1781528 8.4950099 8.3487264 -0.3551285 7.7843744 11.0408926 10.480479 11.860356 7.100150 13.610468 8.491880 5.439237 8.629241 7.697391 9.883670 8.043567 7.104255 10.088803 7.834647 7.195570 11.118275 9.693991 5.756271 8.350455 9.575560 11.074230 8.060565 8.997970 12.208853 6.539641 12.723545 10.403463 10.979376 9.690583 8.823488 9.560702 9.408865 10.417138 8.745485 NA 9.514802 8.082908 11.118275 7.002375 11.376990 2.814755 11.082947 10.919783 6.948603 14.176570 10.258152 10.445723 12.644559 9.691947 -1.355129 NA 10.612049 10.379109 9.380379 TCGA-E9-A3QA 33 0 NA 918 breast stage iia t2 n0 (i-) m0 female 2011 NA no medullary carcinoma 0 white not hispanic or latino NA NA 4 3 6 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.525908e-06 4.508365e-07 5.26315789473684 38.5964912280702 3.50877192982456 35.0877192982456 17.5438596491228 9.4216136 8.7192053 10.5897889 8.6525991 9.2637697 9.0707065 8.7020303 10.5582227 13.1196806 13.1888351 10.3155053 10.3479581 0.9032697 11.6286546 1.3183458 10.5244245 8.0681952 8.5990964 8.4242343 4.6581772 -1.6817699 10.7519113 8.1288976 10.1005420 10.2765161 5.7361773 0.6402507 13.7753315 9.6922785 2.3183168 10.1508204 7.6334755 -1.6817699 6.1127418 9.4183310 9.9200966 8.6933653 9.9823287 9.5996763 10.4511469 4.6037272 8.4920030 15.4850872 8.3137678 10.5210557 10.2779656 8.7991161 3.9330344 0.9032697 8.6025716 9.7664421 NA 10.1172026 6.0118132 7.8141806 5.8261213 8.4044621 11.5577752 10.0407064 10.6123721 11.9141661 8.3112642 10.1982919 9.8594225 10.8266159 10.7285122 4.2490660 11.6883321 7.4604330 3.9907552 10.8480004 9.5302142 4.0380586 5.8261213 12.1105061 9.2659628 11.5420259 9.7757067 2.0187766 4.9330344 12.2431384 12.0195240 8.9801039 8.9079770 0.603220 0.316750 0.095363 -0.037399 -0.030404 0.087969 -0.221080 0.134650 -0.032996 0.164300 0.628250 0.158310 -0.113780 0.165650 0.247310 -0.214530 0.356590 0.054387 -0.217870 -0.205480 0.359530 -0.167260 -0.167260 -0.167260 0.156510 0.402110 -0.103030 0.070243 0.129330 0.113070 -0.316220 -0.037399 -0.030404 -0.211260 0.083776 -0.219730 -0.233580 0.134650 0.055943 0.052444 0.101760 -0.207070 0.059937 -0.224780 0.087915 -0.211560 -0.113780 -0.154710 -0.200500 0.247310 -0.214530 -0.214530 -0.247030 -0.215520 -0.224780 -0.342480 -0.205480 -0.205480 -0.195870 0.089851 -0.167260 -0.167260 -0.187100 -0.209210 -0.103030 0.046559 -0.181690 0.291350 0.099579 0.158 0.000 -0.035 -0.200 0.000 0.000 -0.342 -0.205 -0.196 0.000 0.000 -0.167 -0.167 0.000 0.000 -0.136 -0.136 0.117 0.117 0.000 0.000 -0.182 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.195 -0.195 0.135 0.135 0.000 0.000 -0.174 0.164 0.000 0.000 0.000 0.000 0.158 0.000 -0.035 -0.200 0.000 0.000 -0.342 -0.205 -0.196 0.000 0.000 -0.167 -0.167 0.000 0.000 -0.136 -0.136 0.117 0.117 0.000 0.000 -0.182 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.195 -0.195 0.135 0.135 0.000 0.000 -0.174 0.164 0.000 0.000 0.000 0.000 8.03257145 -1.68176994 4.29560549 11.12185161 10.60257157 6.78409692 10.82983149 9.91845720 9.20392301 0.31834577 12.01050545 12.01727357 2.64025072 NA 2.31831684 8.07321345 4.12568416 12.83230014 11.92345808 10.93234550 9.22671852 0.90326970 9.11517660 10.37564072 8.42161380 6.09968655 1.31834577 -0.68176994 10.27687860 0.64025072 7.96578428 9.28843170 9.81567869 11.24924977 9.67972147 4.77775635 9.67312619 3.67587237 9.16929393 12.70128755 8.63234238 7.29274034 NA 1.77774583 8.23569786 2.22521322 3.77775635 -1.68176994 7.49075302 1.90326970 5.76953638 12.21399581 -0.09665317 10.17241501 11.04006590 9.44373925 6.35724408 10.00438861 13.76534449 9.14884109 5.59445002 5.41635674 10.60054556 1.64025072 6.36817467 -0.68176994 8.77365321 12.697680 9.432068 8.358616 11.628655 9.363403 10.876747 4.658177 11.407611 8.185604 10.693908 13.643385 12.015185 8.602572 7.933036 5.761269 7.549547 10.874832 10.5308222 11.6470008 3.9032890 14.0486875 9.3627199 8.0083238 8.8690725 8.2131436 9.5452919 9.0581065 7.6581758 10.3155053 11.0986606 -1.6817699 9.9684800 8.2401669 10.0463271 11.2781467 11.1848321 9.7271863 7.5662535 9.0152935 9.1313052 8.7009498 10.7617719 8.6933653 10.3140930 10.9337256 11.6560871 10.9298118 10.7726252 10.1598903 7.9330355 0.6402507 9.8760001 6.8706495 9.7664421 9.2984654 10.1172026 4.6581772 11.2703390 8.4044621 7.8942624 13.8472072 10.8099285 10.0183321 12.6189644 10.9713948 7.3708940 2.3688242 10.2150366 8.8938651 8.7550374 TCGA-E9-A3X8 48 0 NA 926 breast stage iib t2 n1 m0 female 2011 NA yes infiltrating lobular carcinoma 4 white not hispanic or latino NA NA 2 3 4 3 4 4 4 3 6 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.733986e-07 12.5 25 0 50 12.5 9.07443559 8.03868090 10.18275151 3.77457624 9.16811724 7.58560406 8.80799659 9.21633190 11.62140699 8.85443925 10.79018760 9.36168130 1.77458678 12.44775631 -0.03283139 12.02943335 7.45505839 7.80956879 8.98541874 11.49591682 0.55218030 13.29652436 6.69513919 10.82247244 9.05997576 4.61107203 -0.03283139 10.53184441 9.39348334 1.96720550 9.65109045 6.07574226 NA 4.66765941 8.12709000 8.68146402 8.62721430 10.48291835 8.31594656 9.43584254 0.96724240 11.40158615 13.73302260 3.09320521 9.35308087 9.28801912 9.13589061 4.96721934 5.66765941 6.25262002 9.78899249 -1.03268381 10.48488793 5.11696769 5.19603649 3.49077548 8.23634528 11.62966439 10.90753215 12.93173991 11.37342353 8.87861040 10.21158233 10.08810435 9.16689090 9.03196140 -1.03268381 10.55874088 9.44092438 -0.03283139 9.62185463 7.80642202 2.77456570 2.28915574 10.32751694 9.05468137 9.71121147 8.30037407 3.35953523 9.25608459 12.40262836 12.83420763 9.16934230 9.60112189 0.56170000 0.56170000 0.00819590 0.00819590 -0.18244000 0.00791750 -0.18692000 -0.18207000 0.19527000 0.19527000 0.19527000 -0.00041585 -0.00041585 0.00317470 0.00317470 0.01000600 -0.17677000 -0.17677000 0.00597000 0.00000000 -0.18131000 -0.17866000 -0.17866000 -0.17866000 0.00194180 0.54471000 0.54471000 0.00513590 -0.18043000 -0.18043000 -0.16929000 0.00819590 -0.18244000 -0.18244000 0.00791750 0.00791750 -0.18692000 -0.18207000 -0.19089000 0.19664000 0.19664000 0.19527000 0.00277110 0.00277110 0.00277110 0.00903120 -0.00041585 -0.00041585 0.01628600 0.00317470 0.01000600 0.00212240 -0.17677000 -0.17677000 -0.17563000 0.00597000 0.00000000 0.00000000 -0.18131000 -0.37459000 -0.17866000 -0.17866000 0.00805670 0.00194180 0.54471000 0.00513590 0.19619000 -0.36397000 -0.37381000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 -0.181 0.198 -0.176 -0.179 -0.179 0.000 0.000 0.000 0.543 0.381 0.562 0.000 0.000 0.196 -0.374 -0.169 -0.169 0.000 0.000 -0.182 -0.182 0.000 0.000 -0.182 -0.182 0.197 0.197 0.195 0.195 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.177 -0.177 0.000 0.000 -0.181 0.198 -0.176 -0.179 -0.179 0.000 0.000 0.000 0.543 0.381 0.562 0.000 0.000 0.196 -0.374 -0.169 -0.169 0.000 0.000 -0.182 -0.182 0.000 0.000 -0.182 -0.182 0.197 0.197 0.195 0.195 0.000 0.000 0.000 0.000 8.8665754 2.5521803 6.9097335 11.6838237 11.5582733 9.5839327 10.7510353 3.3670775 10.7877446 2.5521803 12.5098877 11.9040405 4.0116119 0.5521803 1.2891262 6.8680854 3.2151505 12.0021894 10.8240331 8.7648802 9.9001714 4.4590709 7.6002140 10.8036634 7.8189675 8.0939230 NA 0.5521803 9.6182702 5.7745736 6.2340050 7.2664268 6.9895864 11.8360584 9.7145723 -1.0326838 10.5112170 NA 6.2891465 12.9465544 8.0061375 9.4143017 0.9672424 NA 7.5141128 4.7221053 7.8650639 NA 6.7287695 5.5370755 4.5819297 10.6285513 2.7745657 8.0652508 10.5874383 9.6719868 8.1644353 9.4439648 11.6234199 9.0493675 2.8741084 6.3422578 11.4678115 0.5521803 NA NA 3.8251954 13.437068 6.646698 8.025210 12.447756 10.370763 11.429721 11.495917 10.027914 8.872606 9.249149 12.727107 10.289147 6.252620 10.140896 1.774587 7.215146 8.990973 10.012978 11.989413 3.611078 12.625094 8.451034 6.781000 8.171790 7.049367 9.129333 7.514113 8.322570 10.790188 9.022501 2.967224 9.033308 7.764880 6.767988 8.275557 10.475508 10.050698 7.149066 11.347950 4.096498 7.096501 11.785801 8.627214 10.734161 10.185176 9.378729 10.280101 9.127090 10.047370 5.748579 NA 9.864572 6.667658 9.788992 8.152094 10.484888 6.944499 10.590185 8.236345 7.502494 15.079414 10.350383 9.722106 11.636547 11.167198 4.426647 -1.032684 8.643175 8.490780 8.740358 TCGA-E9-A54X 85 0 NA 727 breast stage ia t1b n0 (i-) m0 female 2012 NA no mucinous carcinoma 0 white not hispanic or latino NA NA 3 5 2 2 1 1 3 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 40.9090909090909 4.54545454545455 0 18.1818181818182 36.3636363636364 9.90132837 9.47576565 11.18623107 7.93830344 8.44526362 8.41620091 10.63514437 10.09649920 8.38654111 13.89410050 12.34693842 10.70074279 6.49773051 12.15122570 3.07739683 10.36877304 7.14475408 9.66324534 9.57865101 13.68342327 3.63379155 14.23819747 3.98993826 9.17465060 10.77538880 7.43701962 -1.01013438 7.37795403 13.07000433 0.57492498 7.04521906 6.44114813 NA -0.01013438 9.03159535 10.48978225 9.44320693 10.92325817 9.63198805 11.12243602 14.00826691 11.88134033 14.40630504 6.04900991 10.40936983 9.64278134 10.79890050 4.69037798 3.63379155 7.78435217 10.68472951 NA 12.63919250 1.31185183 3.15985519 2.98993826 10.11405762 11.81390057 10.93866857 11.63559475 12.48329145 8.39507780 10.64009053 10.17859315 10.86338044 10.19022186 3.38225223 12.51936688 9.87791844 NA 10.07408030 8.97150361 5.32960800 2.89683370 9.67380815 10.06675198 10.07408030 9.71274382 -1.01013438 8.05333131 12.10806629 10.44011659 9.93757333 9.48379180 0.0091705 0.0091705 0.0058309 -0.0141290 -0.0301310 0.6525900 -0.0153290 -0.0153290 0.7837500 0.7837500 0.8018400 0.0000000 0.0000000 -0.0044312 -0.0044312 -0.0044312 0.0284810 -0.0189570 -0.0213730 -0.0059711 0.8508700 -0.8360700 0.0225850 0.0225850 0.0758470 0.0758470 0.0758470 0.0140510 0.0091705 0.0091705 -0.0056757 -0.0141290 -0.0036011 -0.0301310 0.6525900 0.6525900 -0.0153290 -0.0153290 -0.0153290 0.8042200 0.8042200 0.8098600 -0.8680600 -0.8375200 -0.0058140 0.1061400 0.0000000 0.0000000 -0.0044312 -0.0044312 -0.0044312 -0.0044312 0.0034502 -0.0189570 0.0034687 -0.0213730 -0.0059711 0.0116790 0.8414000 0.0855100 -0.8360700 0.0225850 -0.0074720 0.0758470 0.0758470 0.0140510 0.0059700 -0.8327600 0.0303100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.841 0.000 0.000 -0.836 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.653 0.653 0.000 0.000 0.804 0.804 0.784 0.784 0.000 0.000 0.118 0.118 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.841 0.000 0.000 -0.836 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.653 0.653 0.000 0.000 0.804 0.804 0.784 0.784 0.000 0.000 0.118 0.118 9.41094927 NA 3.84791675 11.37391053 11.51178210 8.50603022 11.06206895 6.69453201 8.99051388 -1.01013438 11.64680803 11.21354286 5.13968231 1.31185183 1.57487655 7.00116383 2.57490077 9.61381782 11.14538705 10.28340800 9.36606163 0.57492498 8.21152332 10.23608310 3.63379155 5.15986327 4.71785735 NA 9.28799881 5.64814903 6.52909473 6.93245100 5.03433018 11.07301999 9.82677568 1.98993826 7.96147979 NA 7.55979158 11.68385880 8.51936695 7.19938967 NA NA 8.24967951 4.87257762 1.31185183 NA -0.01013438 5.07740111 0.57492498 10.41934306 0.98993826 7.65171475 10.49127590 9.29028892 2.89683370 7.42456439 11.21333470 4.71785735 1.57487655 4.11922336 10.57348928 2.69037239 NA 5.95571964 NA 14.710057 5.449367 9.477776 12.151226 10.041050 10.150438 13.683423 12.785672 8.343083 9.716154 12.172641 9.540683 7.784352 8.228341 2.896834 7.006745 11.638294 10.51251787 12.67698388 5.96721703 13.34093764 9.22235732 -0.01013438 8.59356256 7.95572081 10.13041457 4.15986327 9.86951951 12.34693842 7.89381844 NA 10.99099257 9.71445023 7.91480846 10.44423564 9.07739924 10.64188493 8.54068292 10.51006391 9.74982452 0.57492498 11.33034557 9.44320693 10.33145510 10.16610947 11.09158375 9.26256611 10.65393903 9.77375309 8.13968334 NA 9.03689670 7.36092871 10.68472951 -1.01013438 12.63919250 4.94413223 10.86299589 10.11405762 6.65527168 14.14811206 10.21634852 10.27186637 12.34142773 10.81171032 NA NA 10.12884808 9.33866441 9.00674459 TCGA-E9-A54Y 63 0 NA 725 breast stage iiia t2 n2 m0 female 2012 NA no infiltrating lobular carcinoma 8 white not hispanic or latino NA NA 1 1 1 2 1 1 3 4 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.976338e-07 3.81477e-07 32.3529411764706 23.5294117647059 11.7647058823529 20.5882352941176 11.7647058823529 8.3134635 7.2390390 9.2684395 4.4926095 10.4001358 7.2725915 8.7780147 8.4759065 9.6667498 12.6329715 10.9882573 9.8667369 1.8296466 13.3992659 2.5666203 9.6262281 2.7041194 8.3688063 7.9311854 12.1765306 NA 14.1510120 4.7682479 11.0640659 10.3842365 6.5666127 3.5666082 11.2046870 11.5640750 -0.7553565 5.8145402 2.2446740 NA 1.5666203 6.5393062 9.8520154 8.1694976 10.2425702 8.8939413 9.3026768 2.7041194 10.9394783 13.2359412 2.1165311 9.4146102 8.7799606 10.0480090 4.4926095 -0.7553565 6.9381717 8.2642760 NA 9.6530149 2.0520333 3.5666082 4.2446816 8.3294936 12.0031165 10.1849987 9.8315248 11.1022774 8.9451248 9.6989843 9.6316253 8.8685667 9.3558208 1.8296466 11.1319057 8.4492564 NA 9.6719980 9.4504782 3.0520333 NA 10.5873154 8.6709497 10.2918090 10.7910973 -0.7553565 7.0964337 10.8907938 9.0407248 9.7244654 9.5300873 1.42800000 2.35660000 0.60160000 0.11360000 -0.22047000 0.21883000 0.92270000 -0.41190000 1.71500000 3.40140000 3.19800000 -0.24204000 -0.24204000 0.02286500 0.01070300 0.03340800 -0.03204100 0.44206000 -0.82814000 0.11653000 -0.05104600 0.58901000 0.58901000 1.33620000 0.00000000 0.00000000 0.00000000 0.39662000 -0.44496000 -0.41862000 -0.36340000 0.13880000 -0.22047000 -0.21156000 0.04372300 0.05541500 0.92270000 -0.41190000 -0.41190000 -0.30181000 -0.30968000 -0.84947000 0.04797800 0.02468900 0.02468900 0.00722170 -0.24204000 -0.24204000 0.02286500 -0.00099926 0.02663800 0.02663800 -0.03204100 0.44206000 0.33157000 -0.34664000 0.08290900 0.08290900 -0.05104600 -0.82847000 -0.82700000 1.33620000 -0.35544000 0.00000000 0.00000000 0.39662000 0.07901500 -0.36963000 -0.36963000 -0.242 -0.242 0.000 0.000 0.000 0.326 -0.347 0.000 0.000 -0.334 -0.818 0.509 1.336 -0.355 -0.355 0.000 0.000 1.107 1.474 0.397 0.397 0.000 -0.370 -0.356 -0.356 0.139 0.139 -0.220 -0.220 0.175 0.000 0.923 0.511 -0.310 -0.310 -0.837 0.542 0.000 0.000 0.000 0.000 -0.242 -0.242 0.000 0.000 0.000 0.326 -0.347 0.000 0.000 -0.334 -0.818 0.509 1.336 -0.355 -0.355 0.000 0.000 1.107 1.474 0.397 0.397 0.000 -0.370 -0.356 -0.356 0.139 0.139 -0.220 -0.220 0.175 0.000 0.923 0.511 -0.310 -0.310 -0.837 0.542 0.000 0.000 0.000 0.000 9.6782705 -0.7553565 7.8557101 12.1265638 12.0931124 10.1914014 11.0524425 3.4850017 10.2694784 -0.7553565 11.0029083 12.5494642 3.4926095 NA 0.8296872 6.4146108 2.8296466 8.2642760 11.5970044 10.4152361 10.7857817 4.6370016 8.0995535 9.4985325 5.4926127 5.6022371 -0.7553565 NA 9.3931618 3.8296466 1.8296466 8.0161748 3.1515828 12.0932728 9.6444971 -0.7553565 10.2510112 NA 3.4146091 11.8301172 10.6572549 9.1988813 NA 6.2890801 9.1545781 NA 3.2446892 NA 3.2446892 2.7041194 1.2447044 10.6667498 NA 2.4146227 10.7672666 9.6772270 3.6370074 9.7848131 9.2904447 5.8445991 4.1515747 1.5666203 13.6439630 2.7041194 NA -0.7553565 2.4146227 14.128552 5.221966 8.600036 13.399266 9.509128 11.663065 12.176531 11.251362 8.936429 9.220533 12.695510 8.404557 6.938172 10.043157 2.566620 7.877680 10.459004 10.4806993 12.8321110 4.7365399 11.6793107 7.4095921 2.7041194 8.9241652 9.3440329 8.7185127 6.5208088 4.9451254 10.9882573 8.0128692 NA 9.3215006 5.7992738 8.8612340 6.2670526 9.9911994 10.0145230 10.0560598 12.0237888 6.2890801 3.9451207 13.0434940 8.1694976 10.8083580 11.2628853 9.7143269 8.7485109 8.9100212 10.3047054 4.8296466 2.4146227 9.4369532 3.2446892 8.2642760 5.7682479 9.6530149 -0.7553565 10.2404522 8.3294936 8.1783755 14.5456096 9.6865917 9.9674926 11.2190997 10.9597891 5.4146091 2.1611460 9.0520401 8.0227623 9.9743059 TCGA-E9-A5FK 60 0 NA 812 breast stage iiic t2 n3 m0 female 2012 NA yes infiltrating lobular carcinoma 10 white not hispanic or latino NA NA 4 3 5 3 6 4 3 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.040392e-07 15.3846153846154 15.3846153846154 0 23.0769230769231 46.1538461538462 9.47153642 8.04039110 10.65198304 5.13781498 9.06182830 9.00541515 8.84980165 9.45758691 10.55150467 10.41435470 11.21095602 9.99802043 1.07169403 12.82504567 2.87907837 9.93281135 8.54339960 8.02882660 8.11611831 12.38843022 1.65667941 13.47872659 4.68643329 10.83044319 10.20743376 7.18546618 -0.92823733 13.69516416 8.78425138 1.07169403 8.22654273 5.65668799 NA 5.41157539 8.85799405 9.23159585 9.14854014 10.16448160 8.51051615 9.88229609 5.44676241 10.98946944 14.31887315 5.10492788 10.10858483 9.65574733 9.21638259 4.35712969 3.24164191 7.51051654 10.54390752 NA 9.89986095 6.37550519 6.42045208 3.65669085 9.09686403 11.85226420 10.84032231 11.24508928 11.63372831 8.15653263 10.23600283 9.78080827 9.98685687 9.86370124 1.87907837 11.28422082 10.22527650 NA 10.36519604 8.59136077 0.07176267 4.74415033 11.00172253 9.28239579 9.94131821 8.94516844 4.95436849 10.40487982 12.84424521 12.81603272 9.70834901 9.57057355 0.400610 0.400610 -0.057250 -0.057250 -0.181130 0.076566 0.074408 0.074408 0.323980 0.323980 0.323980 -0.150160 -0.100790 0.060547 0.060547 0.060547 0.046559 0.046559 0.000000 0.101180 -0.053611 -0.047294 -0.047294 -0.047294 0.180410 0.180410 0.180410 0.121340 -0.068900 -0.172080 -0.050776 -0.057250 -0.181130 -0.080275 0.076066 0.076066 0.074408 0.074408 0.074408 0.072827 0.072827 0.323980 -0.075788 -0.075788 -0.075788 -0.070135 -0.100790 -0.100790 0.066086 0.060547 0.060547 0.060547 0.046559 0.046559 -0.080364 0.000000 0.019621 0.019621 -0.053611 -0.082801 -0.047294 -0.047294 -0.067056 -0.221820 0.180410 0.121340 -0.015741 -0.170440 -0.170440 -0.101 -0.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.180 0.180 -0.163 0.238 0.121 0.121 0.000 -0.170 0.000 0.000 0.000 0.000 -0.181 -0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.324 0.324 0.000 0.000 0.000 0.000 -0.101 -0.101 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.180 0.180 -0.163 0.238 0.121 0.121 0.000 -0.170 0.000 0.000 0.000 0.000 -0.181 -0.181 0.000 0.000 0.000 0.000 0.000 0.000 0.324 0.324 0.000 0.000 0.000 0.000 8.95589484 3.97861666 5.97861437 11.17370012 11.50322205 8.13301477 11.35625938 6.06709657 10.56707983 4.79964686 12.33924269 11.77588748 3.59528882 0.65672517 -0.92823733 7.66043880 3.31964683 12.19939642 11.26370893 9.64347707 8.98461384 5.00246400 7.75822521 10.84321389 9.41934590 7.98760396 -0.92823733 NA 10.35307491 6.49798912 6.61861896 7.61088310 8.57356161 11.27674789 9.82075577 2.77216015 9.04757247 NA 6.95436733 12.46551707 7.99058790 9.69925837 NA 2.24165717 8.05756616 0.07176267 5.24164954 0.07176267 8.45974185 5.57951809 5.26154962 10.60602732 0.07176267 9.22147160 10.70562781 9.84568778 7.41157454 10.94093269 13.51777385 9.55855943 4.68643329 6.61088310 10.41712972 -0.92823733 NA NA 2.24165717 11.7563766 5.9665412 7.7263605 12.8250457 10.2945193 10.9991321 12.3884302 10.7321661 8.7281494 9.8653278 12.8004953 10.0752423 7.5105165 8.7564729 0.6567252 7.0200921 9.7236731 10.7463581 12.3814850 5.4115754 13.0302763 8.0083625 8.7227761 7.9995023 6.0259213 9.4624738 9.4071148 8.1538737 11.2109560 7.6224714 -0.9282373 9.7191829 5.3385100 6.8888358 9.2048667 11.0958252 9.8365961 8.3053440 10.3605906 4.3196541 8.5208732 11.1738248 9.1485401 11.1445270 10.1906655 10.2811778 9.9054052 9.4314740 10.0331741 6.4026420 NA 10.2268715 7.1270069 10.5439075 8.8855057 9.8998609 4.8790784 10.9297054 9.0968640 7.3755052 14.3471215 10.6969767 10.6901099 12.1537071 10.6016429 7.4511031 -0.3147326 8.9558948 8.4958906 8.8448636 TCGA-E9-A5FL 65 0 NA 24 breast stage iib t3 n0 m0 female 2012 NA no metaplastic carcinoma 0 white not hispanic or latino NA NA 4 4 1 1 5 5 2 9 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.219503e-06 3.81477e-07 14.1025641025641 21.7948717948718 2.56410256410256 39.7435897435897 21.7948717948718 8.1410838 8.0455516 9.7990013 5.9394499 9.2809865 8.9280152 7.5741659 10.5091458 9.6020155 13.4869941 9.1509544 10.2221240 NA 11.8300504 2.3696061 9.8970716 8.4194432 8.5911816 8.8187432 10.0587190 0.9545686 11.3766218 6.0420205 10.5869464 11.0859853 6.7094450 2.3696061 8.3265225 10.6971472 4.4988763 6.7094450 8.1110616 NA 5.0700329 7.0769534 9.7468050 9.0752270 9.1144285 8.1993170 8.9639191 1.3696061 5.9989514 13.9721774 5.3557775 9.4302905 9.2507084 10.3575690 3.8290275 1.3696061 8.9806194 12.6538403 4.2764818 10.8818412 5.5790474 4.4988763 4.4570558 9.9164890 11.3143066 10.1311457 10.8956047 12.7220518 7.8534100 9.5129778 8.3891852 10.0812615 10.3121090 1.1393385 11.2376454 9.0025897 NA 10.4590450 9.2598588 3.7619129 3.6915230 11.4878867 10.2384170 9.8980487 9.1865781 2.9545500 5.6733755 13.4307125 12.1682688 8.4139888 9.9573720 0.071248 0.071248 -0.091173 0.500970 -0.265400 0.462120 -0.076012 -0.076012 -0.093667 -0.093667 0.854420 -0.014916 -0.014916 0.202440 0.202440 0.202440 0.011818 0.095653 0.684210 0.107600 0.077286 0.219660 0.233800 0.472720 0.106870 0.106870 0.106870 0.132580 0.071248 0.071248 -0.266850 -0.047531 -0.278300 -0.265400 0.448670 -0.274280 -0.076012 -0.076012 0.537490 -0.274040 -0.055499 0.292940 -0.210690 0.000000 0.000000 0.000000 -0.014916 -0.014916 0.202440 0.202440 -0.281200 -0.281200 0.011818 0.095653 0.095653 0.444770 0.107600 -0.015466 -0.227410 0.234380 -0.278340 -0.286200 -0.463230 0.106870 0.106870 0.132580 -0.123300 0.309050 -0.282630 0.000 0.000 0.202 0.202 0.000 0.000 0.445 0.108 -0.227 0.558 0.558 -0.278 -0.278 -0.463 -0.463 0.107 0.107 0.000 0.000 0.133 0.133 -0.123 -0.283 0.243 0.243 0.000 0.501 -0.265 -0.265 0.462 0.462 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.567 0.438 0.000 0.000 0.202 0.202 0.000 0.000 0.445 0.108 -0.227 0.558 0.558 -0.278 -0.278 -0.463 -0.463 0.107 0.107 0.000 0.000 0.133 0.133 -0.123 -0.283 0.243 0.243 0.000 0.501 -0.265 -0.265 0.462 0.462 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.567 0.438 9.0367061 5.8773884 6.2884582 11.8303064 12.2493692 7.9243755 10.4537386 7.1850419 9.8990543 2.8290174 11.9943900 12.3711417 6.4781192 2.1769610 3.2764818 7.1443819 7.0349310 10.9998616 12.1589244 9.8156440 9.5014515 3.1769450 7.9048700 10.6567297 5.2024843 14.4054246 6.0560958 2.8290174 9.5704931 2.6915118 8.9806194 9.1817719 7.4885359 11.6629369 9.4741933 4.0134533 9.7747360 2.3696061 7.7271465 12.0446694 9.1769495 13.6115777 NA 4.5790474 7.4937162 4.2275794 5.1244812 -0.6303939 3.3695921 2.8290174 1.9545686 11.2186086 2.1769610 10.5332442 9.9815415 10.4859385 8.1311460 8.3382613 11.4715702 8.3411381 2.8290174 3.0700286 8.5470140 -0.6303939 2.6915118 0.9545686 5.1509536 10.937940 8.753299 7.824922 11.830050 11.293293 10.989356 10.058719 10.826462 8.748973 9.824922 12.650510 10.711113 8.980619 8.774736 2.369606 8.094108 8.822865 11.329234 12.732771 3.070029 13.203768 9.009840 7.833119 8.978773 7.246112 9.067848 8.922264 9.761912 9.150954 5.579047 8.352588 10.392656 4.691523 8.847292 11.285100 9.761912 10.358279 8.524413 12.913955 5.519341 5.070033 11.746957 9.075227 10.617522 10.585128 10.261378 10.659613 9.741371 10.444405 5.829025 8.249178 9.687459 7.896641 12.653840 6.778985 10.881841 6.735916 11.727421 9.916489 7.673376 14.019468 11.209586 10.880853 11.654129 11.011646 3.276482 5.709445 8.748973 9.056095 9.419443 TCGA-E9-A5UO 41 0 NA 785 breast stage iia t2 n0 m0 female 2012 NA no mucinous carcinoma 0 white not hispanic or latino NA NA 1 1 5 2 1 1 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.080784e-07 19.2307692307692 11.5384615384615 7.69230769230769 38.4615384615385 23.0769230769231 10.0850629 9.2594483 11.7842570 8.7311938 8.9151378 8.7797476 10.9259644 9.3724320 9.5040113 14.3483802 7.8985959 10.4787969 0.2380531 13.6072849 2.4604018 9.8065952 5.8229672 7.8027903 9.1267489 13.2567853 1.4603756 13.8961799 NA 9.5164163 10.8869623 7.8527155 -0.3470317 9.1408832 7.8229678 1.4603756 7.6388848 6.6974375 NA 3.1766100 8.7693870 8.6656678 9.8192063 8.5001005 8.7298586 10.9811570 -1.3470317 9.7938728 13.5507468 8.7120224 10.7893934 10.2973501 11.2517935 3.8625010 7.3076790 8.5417862 10.7022110 NA 10.9884335 0.6530600 2.1124666 1.4603756 9.7305265 11.2548139 10.1844246 11.6274577 12.2374185 8.8002480 10.5599337 10.3440451 10.7123875 10.5287924 4.4859355 11.2728046 11.8868125 -0.3470317 10.2663722 8.7861853 3.8452391 2.5599323 9.0259081 9.0061900 10.7938729 9.1378659 -1.3470317 9.7130634 8.7537055 9.9625195 9.7615675 9.3629886 0.0136320 0.0548030 -0.0205490 0.0519560 0.0390650 0.0384890 1.0170000 -0.9628700 0.0246890 0.0246890 0.0246890 -0.0213980 -0.0190100 -0.9811100 -0.0189020 -0.0189020 -1.0288000 1.0226000 -1.0155000 -0.0161540 0.9953000 2.8484000 0.8866600 0.8866600 -0.1336800 -0.1336800 -0.1409100 -0.0661180 -0.0927100 0.0136320 -0.0557980 -0.0205490 -0.0702690 0.0495400 0.0384890 0.0384890 -1.0120000 -0.9628700 -0.9628700 0.0097853 0.0101460 0.0246890 -0.9374700 -0.9374700 -0.9649500 -0.0269880 -0.0190100 -0.0792100 -0.9811100 -0.0189020 -0.9795900 -1.0062000 -0.9507900 0.0231450 0.9890800 -0.9430600 -0.0161540 -0.0161540 1.0024000 -0.0540160 -1.0512000 0.8866600 0.0069435 -0.1336800 -0.1409100 -0.0094610 -0.0124380 -1.0386000 -1.0563000 0.000 0.000 -0.980 -0.980 -0.932 0.000 -0.943 0.000 -0.977 0.000 0.000 -0.165 0.887 0.000 0.000 -0.134 -0.134 0.000 0.000 0.000 0.000 0.000 -1.039 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.907 0.000 0.000 0.000 0.000 -0.937 -0.937 -0.172 -0.172 0.000 0.000 -0.980 -0.980 -0.932 0.000 -0.943 0.000 -0.977 0.000 0.000 -0.165 0.887 0.000 0.000 -0.134 -0.134 0.000 0.000 0.000 0.000 0.000 -1.039 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.907 0.000 0.000 0.000 0.000 -0.937 -0.937 -0.172 -0.172 10.5055726 NA 5.5837808 11.7671108 11.7882714 8.1032647 10.8863632 8.1263632 9.9721393 -1.3470317 10.0560551 12.2027231 4.6072415 1.4603756 5.3809649 6.7191328 1.4603756 9.5621861 11.4480681 10.4257701 8.8637146 5.4474602 8.5032299 10.6635712 5.4859323 3.2380072 3.5599323 NA 8.6473965 6.9839604 8.0496476 7.3325236 2.2379919 9.7489675 9.8323302 0.6530600 9.9151380 NA 5.7719833 11.4018649 9.7444785 9.7271846 -1.3470317 0.6530600 8.7431554 4.2677530 -0.3470317 0.9749698 -1.3470317 1.9749698 0.2380531 9.8818617 NA 4.9928953 10.8514881 9.9562530 4.1448948 7.3289998 12.3965101 4.6974347 1.9749698 -1.3470317 13.8167714 5.0624326 NA 2.7404959 -1.3470317 13.581540 6.589681 9.174644 13.607285 9.075781 10.067200 13.256785 12.029033 9.220999 9.537214 12.287627 7.758951 8.541786 8.360402 2.353493 7.874630 11.567054 10.547861 12.462108 6.120648 12.246082 8.419572 0.653060 9.872817 10.024820 10.045441 4.325466 2.900973 7.898596 7.574884 1.822975 10.209549 5.947664 9.407947 11.418536 9.617384 10.678529 8.613045 9.386906 10.065084 -1.347032 9.765476 9.819206 10.749099 10.556548 9.948238 8.598487 10.818578 10.505182 7.945365 NA 8.619419 4.675409 10.702211 NA 10.988433 3.607236 11.008945 9.730527 7.329000 12.769712 10.167264 9.143894 12.347945 10.137866 NA NA 10.059780 9.921585 10.238945 TCGA-E9-A5UP 63 0 NA 803 breast stage iia t2 n0 m0 female 2012 NA yes other, specify 0 white not hispanic or latino NA NA 1 1 5 2 4 1 6 8 1 1 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.080784e-07 34.7826086956522 8.69565217391304 4.34782608695652 21.7391304347826 30.4347826086957 10.9387411 9.2197639 10.9337425 8.2110409 9.4062356 8.9402082 9.1973659 7.6328673 11.1828167 13.0158241 10.7053977 9.9045842 1.6757708 14.7168256 4.1351983 9.5251706 4.6299627 8.1020303 11.1387788 12.6633847 2.1352065 14.8988621 6.4959445 9.4995069 10.8047264 6.5584085 NA 10.9248789 10.6016907 NA 8.6429918 6.2226597 -1.3240938 -0.3242744 9.4447768 9.7002125 9.4028349 10.3060325 9.4887450 10.6325046 2.5826523 10.8559854 14.6174550 7.7237620 9.1646098 10.3200724 11.7803642 4.7842893 -0.3242744 8.4927489 9.8146771 NA 9.9009729 2.6757708 4.5337440 5.4571247 9.0311164 11.0975673 10.2936920 12.4195480 12.2681057 9.5102364 10.8562963 10.5690669 10.6817408 9.9396215 4.4306533 12.5627004 12.2637773 0.2607483 10.8425562 9.4579447 3.5855395 4.5337440 9.9266560 9.6364914 11.2784643 10.2635429 NA 9.7678618 12.6874295 10.0105973 9.0518908 8.6771735 1.75200 1.77300 0.21192 0.21192 0.21253 0.21729 -0.31096 -0.31096 1.84500 0.21960 1.81700 0.20964 0.21131 -0.30534 -0.30534 -0.30534 -0.30240 -0.30748 -0.30028 0.17317 -0.30533 -0.84115 1.77740 1.80450 0.16820 0.16820 0.16820 0.90734 -0.82269 -0.81005 -0.28779 0.21192 0.22484 0.21253 0.22083 0.22083 -0.31096 -0.31096 -0.31096 -0.31004 -0.30850 -0.84155 -0.30440 -0.30440 -0.30440 -0.30478 0.21131 0.23488 -0.30534 -0.30534 -0.30534 -0.30534 -0.30240 -0.30748 -0.30748 -0.30028 0.17317 0.17317 -0.29579 -0.84235 -0.84115 1.77740 0.22360 0.16820 0.16820 0.18995 0.20717 0.19786 0.19786 0.210 0.210 -0.305 -0.305 -0.302 -0.302 -0.300 0.173 -0.305 1.010 -0.823 -0.841 0.936 0.224 0.224 0.168 0.168 -0.810 0.942 0.234 0.234 0.207 0.198 -0.281 -0.281 0.212 0.212 0.225 0.225 0.217 0.217 -0.311 -0.311 -0.310 -0.310 1.006 1.817 -0.305 -0.305 0.000 0.000 0.210 0.210 -0.305 -0.305 -0.302 -0.302 -0.300 0.173 -0.305 1.010 -0.823 -0.841 0.936 0.224 0.224 0.168 0.168 -0.810 0.942 0.234 0.234 0.207 0.198 -0.281 -0.281 0.212 0.212 0.225 0.225 0.217 0.217 -0.311 -0.311 -0.310 -0.310 1.006 1.817 -0.305 -0.305 0.000 0.000 8.9413804 NA 5.8456908 11.9241378 12.5661247 8.4955773 11.6777014 6.0990069 10.2098202 -1.3240938 13.0995379 11.5355817 5.3051206 -0.3242744 4.0333173 6.9565365 1.9976898 10.7823284 11.0164501 11.0478143 9.3865719 -0.3242744 7.5430442 10.6259568 4.0680860 5.6299627 -0.3242744 NA 10.3321903 2.4831321 6.5584085 7.3552454 8.4239584 12.0032016 10.1696209 0.6757256 8.9390346 1.4831063 7.4273095 11.8234474 9.7187928 5.0680817 -1.3240938 0.2607483 8.8431837 0.9976898 1.6757708 NA 2.2607182 6.7772685 NA 9.3295062 -1.3240938 4.6299627 10.1025543 9.3014742 2.9237007 7.7895076 12.3838794 6.3968650 2.3762070 0.9976898 12.4576374 -0.3242744 NA 2.6757708 0.2607483 13.468739 5.390011 9.123882 14.716826 9.445603 11.076111 12.663385 11.897504 8.391727 9.810833 13.269857 10.671179 8.492749 8.044272 -1.324094 7.899767 12.035103 10.8194675 12.1850456 6.8997666 12.4202840 8.5781406 2.2607182 8.5976064 8.0893933 9.9709833 5.0851569 6.9518896 10.7053977 5.9331524 -1.3240938 11.5354943 6.7632283 6.5176127 10.1316063 10.8631175 10.7658779 9.1362214 8.7485679 12.4204942 2.5826523 11.2731336 9.4028349 10.9443074 10.1575648 11.4153351 9.7816740 9.0766449 10.3968646 8.1934347 NA 9.0069622 3.3196179 9.8146771 -0.3242744 9.9009729 3.3196179 10.4774737 9.0311164 6.9189395 11.9270999 9.0627057 9.9784043 13.5729491 10.6494628 NA NA 9.1504853 9.8210607 10.2583779 TCGA-E9-A6HE 45 0 NA 847 breast stage iiic t3 n3 mx female 2012 NA yes infiltrating lobular carcinoma 12 white not hispanic or latino NA NA 2 1 2 2 4 4 3 8 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.0662047 8.0050732 10.7629883 5.7869805 8.8590393 8.1697251 9.5871621 9.0464630 10.5400122 7.5088398 11.6456529 9.7744031 NA 13.5321419 2.0764907 10.2391080 7.2788341 7.7333998 8.4781431 11.7481092 1.4243847 13.3202568 6.1008726 10.0516583 9.6191679 6.0764885 0.2020102 10.0672364 11.1074056 -0.3828896 8.7320999 5.8554615 -1.3830778 2.6170633 8.5668829 9.3660874 8.9746082 9.3407171 8.8756222 9.6614503 3.3174922 10.9185523 14.3439129 5.0313599 10.2815034 7.4308372 9.6303787 4.3984188 0.6170163 7.5477937 10.5069403 0.2020102 9.3526122 6.8554603 5.1406192 5.0093740 8.4356382 11.6465159 11.2676592 12.5161298 12.0267122 9.8637968 10.9202661 10.2368176 10.1869118 9.5065601 1.6170633 12.2811700 12.0944349 -1.3830778 10.3325892 7.8068808 1.9390008 4.0093740 9.1735622 8.4609772 9.5993368 8.0846617 3.4750330 9.5485324 14.3550692 13.5916500 9.4897310 10.1940128 1.17550000 1.20340000 -0.00387790 -0.00387790 0.00013863 0.00750000 -0.00636680 -0.01367700 0.00332990 0.00332990 0.00332990 0.00652620 0.00889200 -0.61076000 0.01950300 0.01950300 0.00000000 0.00000000 -0.63349000 0.00847430 -0.01562800 -0.61114000 0.00905900 0.00905900 0.00360760 0.00360760 0.00360760 0.02188400 0.01028500 -0.00138580 0.00124810 -0.00387790 0.02553100 0.00013863 0.00750000 0.00319100 -0.00636680 -0.01367700 -0.00968060 -0.00401620 -0.00401620 0.00332990 -0.04261800 -0.04261800 -0.04102400 -0.04102400 -0.93622000 0.01950300 0.01768400 0.01950300 -0.61345000 -0.61345000 0.00000000 0.00000000 0.00000000 -0.60941000 0.00847430 0.01728800 -0.01711600 -0.63760000 -0.62236000 0.00905900 0.42167000 0.00360760 0.00360760 0.02062300 0.01042400 -0.62484000 -0.62484000 0.000 0.000 0.000 0.000 0.000 0.000 -0.609 0.000 0.000 0.030 -0.601 -0.611 0.000 0.427 0.427 0.000 0.000 0.000 1.165 0.000 0.000 0.000 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.609 0.000 0.000 0.030 -0.601 -0.611 0.000 0.427 0.427 0.000 0.000 0.000 1.165 0.000 0.000 0.000 -0.625 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8068808 0.9390008 7.9591308 12.1675624 11.8101194 8.7576304 12.2626020 4.9812773 9.4371632 2.6170633 12.7015324 11.7979940 3.3174922 2.0764907 2.5239383 6.8167290 3.6614532 11.0762316 10.6007623 10.3852404 9.5864426 3.2020258 7.9162640 10.1692449 6.3035561 8.1188933 1.6170633 NA 10.2340644 4.2317626 6.3105437 8.2681078 6.1716452 10.6708666 9.4796936 0.9390008 10.8167285 NA 7.1678025 12.0416161 7.6669050 8.7203438 NA 1.2020102 8.6817989 5.3852412 6.3174958 -1.3830778 4.3719421 5.8750108 2.6170633 11.1038911 2.7045179 7.4812424 10.6645209 10.0002203 3.8649884 8.9423617 12.3199863 8.9985992 1.2020102 4.6170575 10.9015911 1.6170633 NA -1.3830778 3.7869831 13.073991 6.920836 8.142577 13.532142 9.097846 11.588240 11.748109 10.383171 8.964700 9.809349 13.691239 10.117898 7.547794 11.193304 2.076491 6.907075 9.582119 10.5156576 11.8599325 6.4372344 13.5588828 9.3635704 4.5477953 8.8920166 8.4467789 9.5421209 6.6226800 6.6559757 11.6456529 9.0866981 0.9390008 10.1139099 7.4244107 7.7852269 9.6824723 9.4420148 10.0184691 8.1268309 10.5008450 6.1869125 5.1248492 11.8898142 8.9746082 10.6018306 10.2331455 9.7444057 9.5603036 10.1435554 9.7769274 6.2020180 7.5683407 9.2911514 7.5363661 10.5069403 4.0433183 9.3526122 6.2965363 10.0625883 8.4356382 7.3984162 14.2184207 10.6142356 9.2290031 12.5593873 11.3349467 1.6170633 1.4243847 9.3192289 9.2582047 8.8228493 TCGA-EW-A1IW 80 0 NA 371 breast stage iib t2 n1a mx female 2010 NA no infiltrating lobular carcinoma 2 white hispanic or latino NA NA 2 2 NA NA 3 4 4 5 3 3 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.664627e-06 7.976338e-07 16.4383561643836 43.8356164383562 6.84931506849315 17.8082191780822 15.0684931506849 10.4770021 9.8115452 11.5347556 9.7551722 8.8691746 8.8202942 9.2858976 9.7651752 10.1550740 11.6325005 11.8682257 10.6761681 5.6984074 16.7801314 3.9865293 9.8967349 6.2213068 8.7404976 9.9634166 13.3140455 5.0827452 13.9584715 6.9927367 9.1248053 10.8102283 4.8427979 -1.8714426 8.3084596 12.4598174 2.4504855 8.7687954 7.7450995 0.9359123 3.7724030 10.2334768 11.1865423 9.6633398 11.3469625 10.4314750 11.5773122 -1.8714426 10.5184508 14.8680543 7.9176764 9.1912715 10.9493279 10.8168009 5.9099099 4.8427979 9.1817978 11.6416613 -1.8714426 11.7125735 5.6907942 5.8359089 4.8150528 10.3912327 11.9281358 10.0684971 11.7391141 13.0223261 8.3976772 11.3177574 10.9749675 12.0516923 10.3779603 5.0474119 11.5565181 12.0806548 0.7135199 10.3322044 9.1932932 3.0185096 4.6984074 10.3437802 9.8049485 9.8733844 10.1467508 3.7432564 10.2416416 13.5732096 12.6200279 10.3926999 9.1136810 0.52485000 0.53467000 0.00027728 -0.00609040 -0.01917700 0.00208050 0.00124810 -0.01259300 0.00610900 0.00610900 0.00610900 0.01028500 0.01028500 -0.54310000 1.53670000 -0.54915000 -0.00221680 -0.00221680 -0.56114000 0.00791750 0.01474900 -0.47986000 3.65690000 0.01028500 -0.01436600 -0.56087000 -0.01656700 0.02426800 -0.54573000 -0.55677000 -0.01188700 0.00027728 -0.01917700 -0.04915400 0.00208050 0.00208050 0.03157700 0.00000000 0.00166420 -0.01697900 0.00000000 0.00610900 0.01335300 0.01335300 0.01335300 0.00555290 0.01028500 0.01028500 0.01474900 -0.66596000 -0.54915000 -0.54915000 -0.00221680 -0.00221680 -0.00221680 -0.54310000 0.00791750 0.00791750 0.01474900 -0.54219000 -0.55377000 -0.00981850 -0.15338000 -0.01436600 -0.01656700 0.02426800 -0.15439000 0.02454800 0.02454800 0.000 0.000 0.000 -0.549 0.000 0.000 -0.552 0.000 0.000 0.000 -0.542 -0.533 0.000 -0.152 -0.152 0.000 0.000 0.000 0.515 0.000 0.000 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.549 0.000 0.000 -0.552 0.000 0.000 0.000 -0.542 -0.533 0.000 -0.152 -0.152 0.000 0.000 0.000 0.515 0.000 0.000 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8615659 3.7432564 6.5208685 10.2236179 11.3495334 6.0502122 10.7238081 9.5377135 8.7934957 3.8564679 12.9861915 10.7713582 3.5548098 3.1729515 3.7432564 7.9229667 4.6984074 9.8662204 10.7576795 11.0405043 9.9783467 2.9865384 7.5057608 9.2468427 7.1086907 6.8255185 2.4504855 -0.2864801 10.9477318 6.3134255 7.6022564 7.5187192 7.6812194 9.9245496 10.3663581 4.9099123 8.9834189 0.1285574 7.9049838 12.4307611 7.2629771 7.4948732 1.1285574 5.3764779 8.7867620 5.7059807 3.2160202 1.4504855 5.9423315 7.2228654 3.7432564 10.2113649 -0.8714426 9.3970925 10.0979370 10.0761875 5.2681012 9.5563873 11.8113258 9.1390788 3.7432564 3.8289869 13.4291891 -0.2864801 NA 0.9359123 1.5879890 14.122470 5.961440 8.691747 16.780131 9.310324 10.862625 13.314046 10.974041 8.516848 11.031868 13.661941 11.162146 9.181798 8.612367 1.298482 7.888439 11.531829 11.390058 12.104757 6.977173 14.092754 8.539002 7.218663 8.641291 9.916861 10.839604 6.533693 5.870017 11.868226 6.145360 2.450485 10.714452 7.136979 7.591482 11.769925 10.286213 10.862625 8.974824 8.716328 12.403948 6.071065 12.217034 9.663340 10.303476 9.437458 11.776571 9.607826 10.252349 10.408741 8.943133 7.514413 8.572509 8.743739 11.641661 6.059288 11.712574 6.366955 10.832454 10.391233 6.797436 13.062057 9.678335 10.026396 12.819749 10.826387 5.094333 3.350427 10.106188 10.409901 9.377071 TCGA-EW-A1IX 48 0 NA 1208 breast stage iia t1b n1a mx female 2008 NA no other, specify 1 asian hispanic or latino NA NA 3 1 4 3 4 4 5 4 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 6.935946e-08 0 73.3333333333333 0 20 6.66666666666667 10.9258333 10.2968882 12.2935244 10.1020215 8.0664939 9.2838093 10.9963261 9.8665096 10.1846973 14.1679744 11.6141890 10.8967535 1.7207162 13.4393469 3.3056787 10.2778634 5.1357565 8.6087856 10.4437161 12.9524734 1.3581712 14.2406281 6.6852197 9.6278032 10.6694106 9.1168479 -1.4492963 11.7909517 9.7213450 2.3581430 8.4621857 7.4785723 -1.4492963 5.2787133 10.3243453 9.9511397 10.3741612 11.8931464 10.3593559 11.7862098 10.7519989 11.1844703 14.7831211 8.7723809 10.1520958 11.9559354 11.6935392 5.6903445 4.8727204 9.3305134 11.6224238 0.5508022 11.1765027 6.7602476 6.3386972 5.0426487 10.5637675 11.6276095 10.4482612 12.6728939 12.9209364 8.5064437 11.0211985 10.8395908 11.4599369 11.6246007 5.2922590 11.2083356 10.2624609 -1.4492963 10.4326726 8.9366562 3.8373075 5.5049890 10.5560675 10.0194180 10.3496707 9.8298240 4.3056787 10.1955515 13.7347781 12.0562333 10.1824256 9.9548710 2.7357e-02 4.9256e-02 2.9133e-03 1.5255e-03 -1.3858e-03 -1.6704e-02 1.8030e-03 -5.1846e-01 1.9269e+00 -8.3160e-04 -9.6283e-03 -1.3327e-03 -8.3160e-04 -1.5158e-03 -1.5158e-03 -1.5158e-03 -2.0784e-03 -2.0784e-03 8.7741e-04 3.3804e-03 6.9222e-05 6.9327e-04 6.9327e-04 6.9327e-04 9.3098e-03 -1.1582e-03 1.6642e-03 3.1910e-03 -1.3862e-04 2.7357e-02 -4.1546e-03 2.9133e-03 -5.2788e-01 2.6357e-03 -1.6704e-02 -2.5346e-02 5.4139e-03 -5.1846e-01 -5.2634e-01 0.0000e+00 -1.9399e-03 -5.2297e-01 1.5255e-03 1.5255e-03 1.5255e-03 1.5255e-03 -8.3160e-04 -8.3160e-04 5.9700e-03 -1.5158e-03 6.9327e-04 6.9327e-04 -2.0784e-03 -2.0784e-03 -2.0784e-03 -1.8014e-03 3.3804e-03 3.3804e-03 4.5800e-03 4.9969e-03 6.9327e-04 6.9327e-04 8.3195e-04 9.3098e-03 -1.1582e-03 3.1910e-03 2.6357e-03 -5.2808e-01 -5.1948e-01 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.507 0.000 0.000 0.000 0.000 -0.528 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 8.1837892 -1.4492963 4.9083470 10.7153866 11.3198052 6.9015126 10.9580617 9.0936515 8.6194647 2.0102428 11.0478973 10.8869238 3.7987245 2.8727303 4.4334402 8.3978513 3.6382592 9.9506059 11.5621959 10.4234688 8.9083458 4.0426443 7.9214816 10.3785335 6.2650393 5.6488249 -0.4492963 -1.4492963 11.1641230 6.7939674 7.6033623 8.4815310 5.8817111 10.6879003 10.4610618 7.1432505 8.6020029 NA 9.3198053 12.0922536 9.3321536 7.2125723 0.5508022 2.6382592 8.1225464 2.5508022 3.9770601 -0.4492963 4.1053847 4.7005396 4.5049890 10.1746754 NA 7.9301720 10.3321536 9.5745483 6.9344976 10.0870411 11.8491429 8.1892296 0.1357975 3.2512343 10.9255617 2.4576731 NA 3.0102248 1.3581712 13.8983544 4.8727204 8.7927770 13.4393469 10.4486394 9.5876543 12.9524734 12.9197777 9.3470200 11.1659637 13.1157174 10.2293941 9.3305134 8.8715945 0.1357975 7.1946505 11.1634321 11.5214391 12.4097462 6.7844137 13.6044216 8.7735889 5.7796117 9.3411423 7.8794687 10.9620692 7.5507937 8.6195722 11.6141890 7.5107958 5.6593195 11.0692012 6.5049906 6.7392838 11.0928585 10.7322568 10.8175804 8.5852766 8.9149286 12.5836145 6.8682065 11.6741911 10.3741612 10.2611698 9.7856114 10.7014932 10.0496432 10.3824970 10.8199206 9.6242660 NA 10.0937823 6.7399264 11.6224238 6.4334369 11.1765027 8.5465611 10.8209198 10.5637675 7.5309338 13.8332308 10.1087361 10.2748814 12.8079607 11.1049031 2.7987141 0.8727106 10.6778209 10.5602726 9.9132857 TCGA-EW-A1IY 38 0 NA 258 breast stage i t1c n0 mx female 2009 NA no infiltrating ductal carcinoma 0 asian not hispanic or latino NA NA 2 5 NA NA 4 4 5 5 4 3 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 2.427581e-07 31.8181818181818 40.9090909090909 0 18.1818181818182 9.09090909090909 10.8651353 10.4329723 11.5239820 10.0016465 8.7736839 9.6320817 9.5033758 10.7518936 9.5366445 13.1607205 11.5093931 10.4838928 8.0664843 11.0099617 3.0815953 8.7652878 6.4461636 8.6341326 9.9634191 12.8182752 4.1054350 13.4091440 6.3694578 9.5095328 10.4858814 6.6943370 -0.8252101 8.8377251 11.3575606 -0.2404180 7.5189969 8.4190648 NA 4.1747020 10.4338556 11.2008784 10.1347028 11.5325277 10.6134926 10.8904483 11.6097199 10.7743812 14.1152438 7.7470409 8.6685564 11.1489361 11.8580244 4.0573463 0.1746621 9.1935963 12.5394510 -0.8252101 11.9076101 5.5056179 8.3926583 4.3244506 11.2387698 11.9857744 10.3679181 13.1510411 13.4058469 8.2648132 11.2478382 10.9285589 11.9529833 10.5570546 4.5497431 13.2498456 11.1532325 0.7596672 9.6854649 9.8302316 4.3070715 6.0201910 10.9880811 10.9884820 9.6009655 10.4598140 0.9820718 6.0634447 14.1769444 12.7130110 9.8699291 9.2681183 0.8176800 0.8152100 -0.0117390 -0.0085666 -0.0084286 0.3117800 -0.0111880 -0.0162820 0.3004400 0.3004400 0.3004400 -0.0059422 -0.0059422 -0.0176520 -0.0104980 -0.0104980 -0.0013758 -0.0027607 -0.0122900 0.3159600 0.3061800 0.0000000 0.0000000 0.0000000 0.0089020 0.0089020 0.0089020 0.3865200 -0.0103600 -0.0103600 0.2774300 -0.0090946 -0.0084286 -0.0121730 0.3032700 0.3032700 -0.0111880 -0.0111880 -0.0162820 0.3976300 -0.3699600 0.3119500 0.3053000 0.3053000 0.3053000 0.3246400 -0.0059422 -0.0140800 -0.0116010 -0.0104980 -0.0104980 -0.0104980 -0.0013758 -0.0027607 -0.0095721 -0.0122900 0.3049000 0.3049000 0.3092200 -0.4700300 0.0000000 0.0000000 -0.0030375 0.0089020 0.0089020 0.3865200 -0.0071858 0.0048680 0.0048680 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.305 0.309 0.403 -0.470 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.387 0.387 0.000 0.000 0.277 0.277 0.000 0.000 0.000 0.000 0.303 0.303 0.000 0.000 0.393 0.393 0.300 0.300 0.305 0.305 0.133 0.133 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.305 0.309 0.403 -0.470 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.387 0.387 0.000 0.000 0.277 0.277 0.000 0.000 0.000 0.000 0.303 0.303 0.000 0.000 0.393 0.393 0.300 0.300 0.305 0.305 0.133 0.133 7.9461904 NA 5.6904003 8.9972715 10.5946610 5.6472685 10.0303479 8.8479834 7.9691165 1.9820718 11.8310139 11.1157484 2.4226367 2.4226367 1.9820718 8.9279175 4.6665521 11.1923791 11.1674621 11.5423886 9.5123227 2.8185643 7.3792718 9.2634889 7.3890195 7.4320884 3.6009714 NA 11.0375319 6.2621644 7.5519112 7.7967528 5.0326827 8.4391435 10.6867005 5.9026211 6.7292890 1.3446013 8.8167523 12.7658725 6.8506582 6.7254481 NA 0.7596672 9.0763221 -0.2404180 1.8751510 -0.8252101 8.0512176 4.7611629 3.6665521 9.8086042 NA 9.3020503 10.2064020 10.0435233 5.7596645 10.2414627 14.4984065 9.3589562 5.2832254 4.7746131 12.1392222 2.9820535 NA 1.3446013 0.7596672 12.864417 5.759665 9.138319 11.009962 10.117948 11.357561 12.818275 12.376212 9.562718 10.704375 13.938510 9.238770 9.193596 7.912793 1.634129 7.757783 11.581437 10.716523 11.235734 7.518997 13.474480 9.657005 9.969523 8.355853 9.184530 9.784097 6.013904 7.776472 11.509393 7.216360 2.818564 12.024106 4.956061 7.368670 11.659146 10.741468 11.344626 8.166223 5.832913 11.757901 7.262163 12.038752 10.134703 11.128170 9.745031 11.214305 9.059634 11.233200 10.808831 9.162675 1.174726 8.694612 10.215634 12.539451 7.988482 11.907610 7.990084 10.608808 11.238770 7.180325 13.411014 10.561641 11.269933 12.954215 9.523982 5.767157 1.344601 10.933757 11.164982 9.640267 TCGA-EW-A1IZ 53 0 NA 554 breast stage iiia t2 n2a mx female 2010 NA yes infiltrating ductal carcinoma 5 white not hispanic or latino NA NA 3 3 4 3 1 4 5 6 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.727868e-06 2.774378e-06 35.9430604982206 3.91459074733096 1.06761565836299 31.3167259786477 27.7580071174377 10.0398774 9.2958628 11.0099774 8.1449498 8.6384486 9.2357419 9.8363084 10.1649688 11.3338784 10.4462456 10.9284475 10.3192268 0.3591838 12.7669352 2.5816164 9.2840373 5.7966289 8.9150921 8.6826551 12.2178535 -1.2256662 13.5295672 4.6569082 10.1419665 10.6626251 7.4431474 2.2337040 13.3665156 9.5662392 1.7742494 8.1857734 6.5751625 NA 6.3963136 9.5241319 9.8867018 9.8755815 10.3699860 9.3880517 10.4528625 10.8028591 10.2666163 14.7001413 5.8260705 10.9702496 11.0814631 10.3134211 4.9035445 7.3778890 7.8670192 10.0334171 NA 10.3713837 6.1493021 8.1427688 4.2005279 10.3095377 11.8099206 10.4576957 10.4533025 12.5002676 8.0363572 11.6561410 10.0411952 10.9205128 10.4167653 3.1665869 11.1517440 11.2623535 0.3591838 10.2290757 8.6901419 2.6830676 6.0030805 10.9186019 9.5621649 9.8996758 9.2899622 2.8617172 7.7686157 12.1730060 11.7447278 9.4145072 9.5637959 0.00499690 0.00499690 -0.08757900 0.00124810 -0.00119150 0.00000000 0.00661230 -0.02126200 -0.00238510 -0.00238510 0.00610900 0.00319100 0.00319100 -0.00027724 -0.00027724 -0.00097017 -0.00110870 -0.00110870 -0.00774820 -0.27070000 0.01084200 -0.00027724 -0.00027724 -0.00027724 0.00249690 0.00249690 0.00249690 0.01195800 0.00499690 0.00499690 -0.00083160 -0.25769000 0.00597000 -0.00119150 0.00000000 0.00000000 0.00661230 -0.02126200 -0.01601700 0.00402430 0.00031510 -0.00238510 0.00583090 0.00583090 0.00583090 0.00583090 0.00319100 0.00319100 -0.00027724 -0.00027724 -0.00097017 -0.00097017 -0.00110870 -0.00677870 -0.00677870 -0.02516300 -0.27174000 -0.27174000 0.01084200 -0.27117000 -0.00027724 -0.00027724 -0.28442000 0.00249690 0.00249690 0.01195800 0.00027728 0.01377200 0.00674810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.272 0.000 0.000 -0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.272 0.000 0.000 -0.271 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.3172941 -0.2256662 4.2661119 10.9236919 11.8097488 8.1231897 10.5613487 8.9777693 9.9352115 0.3591838 12.4556106 11.4911825 3.2978224 NA 0.7742494 7.8403518 4.6569082 11.1166149 11.2375313 10.4131507 9.3192268 0.7742494 8.4590110 10.5453391 9.0642812 1.9441838 0.3591838 NA 10.2615999 6.2336944 6.8349577 7.7770771 7.2780879 10.6435246 9.6134661 5.6071527 9.1772743 NA 6.8457246 12.3126938 8.5490496 8.2520206 -1.2256662 6.6569053 8.2661156 NA 4.0596668 -1.2256662 8.9714792 5.0961902 5.2661156 10.6004135 0.7742494 8.1096526 10.1910598 9.7784828 7.9341337 10.8590708 13.1346980 9.6361247 6.9591372 5.8295452 10.5940423 0.3591838 0.3591838 4.0596668 1.9441838 12.528183 6.681153 8.967788 12.766935 10.330289 10.383441 12.217853 10.401340 8.871412 10.238808 12.784266 10.223927 7.867019 7.998264 2.774270 7.545752 10.503883 10.436931 11.957588 3.903549 13.463931 8.745806 8.784091 9.166580 8.112397 10.321605 8.966555 8.836309 10.928448 8.792463 2.359212 9.765784 7.385287 7.234841 9.859735 11.060531 9.760104 6.840351 10.556851 9.264110 8.913814 12.433916 9.875582 10.315359 10.159586 10.904189 10.206804 10.221862 10.365317 8.231643 9.192115 9.740566 7.309537 10.033417 9.843041 10.371384 3.297822 11.494507 10.309538 7.539267 13.853914 11.110769 10.799402 11.692753 11.198691 7.555622 2.359212 9.699075 8.599221 8.908689 TCGA-EW-A1J1 38 0 NA 575 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white hispanic or latino NA NA 2 1 2 2 1 1 3 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 2.427581e-07 33.3333333333333 22.2222222222222 5.55555555555556 16.6666666666667 22.2222222222222 10.1744243 10.0009904 12.2327091 9.4008165 8.3556088 8.3626571 12.1106535 9.6248707 7.5886607 14.2636766 12.1741239 10.6048002 -0.6402540 12.8590026 3.6077682 9.3605460 6.4419913 7.4839633 9.9004543 13.4142766 4.2905792 14.2265895 2.0602895 9.2596065 11.4135980 10.2185999 1.9448210 11.7625355 8.8824233 -1.6402540 8.0602814 6.2787059 NA 4.6636236 10.7190423 9.8730760 9.5228624 11.7588527 10.0762327 11.9011805 NA 12.7061478 13.8501600 9.0260215 10.8388642 9.4929840 10.3853275 5.2178240 5.1411998 9.2447755 10.3717679 NA 11.4112207 8.5372615 6.7692322 4.6266260 10.9834947 12.3043709 9.4519383 12.9797752 13.0984619 6.6681815 10.3773462 9.9724431 11.5353914 10.6533135 5.9448046 13.0040361 11.8313901 NA 10.0193918 9.2386591 2.8218939 5.7861075 10.2135412 10.8061498 10.7753196 10.1887717 0.9447835 8.4083289 12.0084241 10.4433212 10.2493458 9.6330546 0.0035425 0.0035425 0.0305250 0.0299630 -0.7984000 0.0209770 -0.3936900 -0.3936900 0.1314800 0.1314800 0.1231000 0.0071565 0.0071565 0.4030300 0.3676500 -0.4006900 -0.0248620 -0.0248620 0.0194370 0.0106740 0.0025706 -0.8104200 -0.0174560 0.6446100 -0.0334690 -0.0334690 -0.0334690 -0.0147050 -0.8225600 0.0035425 -0.3806100 -0.8086900 -0.8147800 -0.7984000 -0.8276900 0.0235000 -0.3936900 -0.3936900 -0.3936900 0.0194370 0.0194370 0.1314800 0.3987000 0.3987000 0.3987000 0.3983700 0.0071565 0.0071565 -0.4056700 0.3676500 -0.4006900 -0.4006900 -0.0248620 -0.0354670 -0.0354670 0.0000000 0.0079914 0.0079914 -0.0067079 -0.8283400 -0.8104200 -0.7844100 -0.8097600 -0.7818800 -0.0334690 -0.0147050 0.0213980 -0.8011500 -0.8011500 0.000 0.000 0.368 -0.033 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.793 0.000 -0.810 -0.810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.801 -0.381 -0.381 0.000 0.000 -0.798 -0.798 0.000 0.000 -0.394 -0.394 0.000 0.000 0.131 0.131 0.399 0.399 -0.201 -0.201 0.000 0.000 0.368 -0.033 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.793 0.000 -0.810 -0.810 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.801 -0.381 -0.381 0.000 0.000 -0.798 -0.798 0.000 0.000 -0.394 -0.394 0.000 0.000 0.131 0.131 0.399 0.399 -0.201 -0.201 8.45523885 NA 3.31404390 10.44265617 10.03623970 6.22884947 11.33479411 8.55461111 8.91658741 -0.05514155 11.47472289 10.52439999 6.50958817 5.81927221 -0.05514155 7.28168249 4.50958817 9.90528907 12.09582090 10.99578665 9.30820909 NA 7.94480458 10.23328593 7.13462859 2.81927987 2.68176408 NA 9.79499120 7.32850888 5.04634263 7.52223312 4.64524628 10.09790031 10.34354807 4.35984442 8.00189342 NA 5.81927221 12.42475299 8.08776249 6.70413743 NA 6.97822767 8.09624393 2.60776823 1.94482097 1.52977098 6.69969182 5.69710657 3.31404390 10.12926653 0.94478350 6.06720200 10.40764740 10.08733687 4.68176970 9.17682539 13.79310127 8.02340008 4.81927476 3.21782008 11.65575422 3.16719733 NA 2.75214913 1.94482097 14.741783 4.529765 7.806925 12.859003 10.988287 9.574768 13.414277 13.787122 8.979145 10.985322 12.580296 10.851194 9.244776 8.738137 2.529771 8.358432 11.893780 10.9660157 12.7551751 6.9448046 14.0580560 9.3738624 6.2178220 9.3342565 7.6547384 11.0651740 7.2332860 7.7607213 12.1741239 4.7348830 0.9447835 11.1505976 3.6817753 6.5931267 11.2340548 10.7617880 11.3773462 8.3752567 9.5796154 11.4309690 7.0108939 12.8440020 9.5228624 11.2508660 10.1619543 13.7531317 8.8017484 11.4078178 11.1329810 10.1092923 NA 9.3654734 6.7478586 10.3717679 6.3654668 11.4112207 6.4042356 11.7894382 10.9834947 7.2053319 14.3638208 10.1824127 9.9814358 12.5052964 9.4968330 3.4891190 NA 10.9249439 10.9325421 9.7687022 TCGA-EW-A1J2 50 0 NA 403 breast NA t1c n1mi mx female 2010 NA no infiltrating lobular carcinoma 1 black or african american not hispanic or latino NA NA 3 5 4 3 3 3 4 3 4 3 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.282743e-07 1.733986e-07 34.6153846153846 23.0769230769231 0 15.3846153846154 26.9230769230769 10.9166904 10.2006842 11.9045530 10.1052540 8.6455759 9.4819685 10.3758324 9.8248173 9.8474063 10.6968879 11.3470588 10.4269849 1.9131096 13.6296594 3.6209500 9.9644252 7.0696302 9.0506293 9.5095640 12.8055167 5.0174632 13.5131624 7.2589005 9.1707273 10.6314873 8.4282999 NA 9.6305737 7.8812162 2.9131288 8.2765306 8.2974056 -1.9936661 4.7875944 10.2867159 10.4687374 10.1342294 11.6795441 10.6223244 11.8875403 5.6786607 11.4327619 14.7807004 8.5206925 10.0251307 11.6663424 11.9276112 5.3460846 5.2350530 9.6314872 12.2516392 -0.4088951 11.4198630 6.2205544 6.8485854 5.3008559 10.7142412 11.9216477 10.6668996 13.0854698 13.1834210 8.3681790 11.1485017 11.0215491 11.4718015 11.4327619 5.4819673 12.0994050 11.8194150 -1.9936661 10.2467282 9.1277687 3.8691805 6.5100615 10.3159956 10.4009657 10.3698223 10.0233915 4.6786579 10.2153837 12.8909303 12.7930152 10.3312594 9.4682261 0.90816000 0.91723000 -0.00041585 -0.00041585 0.00430210 -0.00013862 0.00000000 -0.41322000 0.00569190 0.00569190 0.00569190 0.02175300 -0.01476400 0.00680440 0.00680440 -0.40462000 -0.41641000 0.00305220 0.00917050 0.00180300 0.00875280 -0.27344000 0.27035000 0.28010000 0.00194180 0.00194180 0.00194180 0.01436600 0.00000000 0.00000000 -0.00239600 -0.00041585 0.00958830 -0.00110870 -0.00013862 -0.00013862 0.00000000 -0.41322000 -0.00097017 0.00499690 0.00275190 0.00569190 0.00430210 0.00430210 0.00430210 -0.01931400 -0.01476400 -0.01476400 0.00680440 0.00680440 -0.40385000 -0.40385000 0.00305220 0.00305220 -0.00816820 0.00402430 0.00180300 -0.40871000 0.00652620 -0.52920000 -0.27344000 0.27035000 0.01070300 0.00194180 0.00194180 0.00026691 0.00488470 -0.40340000 -0.40340000 0.000 0.000 0.000 -0.404 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.003 0.270 0.000 0.000 0.000 0.000 0.000 0.908 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.404 0.000 0.000 0.000 0.000 0.000 0.000 -0.529 -0.003 0.270 0.000 0.000 0.000 0.000 0.000 0.908 0.000 0.000 0.000 -0.403 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.398 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.193586960 -1.993666066 5.606149040 10.252975697 11.222374649 6.933835802 10.938818955 9.904250604 8.306209826 1.813606775 12.136001066 11.413756433 3.254155605 3.398555595 4.913123980 8.222980811 4.155983943 10.440602711 11.543453496 11.303151258 9.295101261 3.761125674 7.932531313 10.432761942 6.916127871 6.997756444 0.328147114 NA 11.385613466 6.635591890 7.891931306 8.108210793 7.312296685 10.008557899 10.572289147 3.734156820 8.278864783 1.328147114 9.344971375 12.718923271 9.202837157 7.039658250 -1.993666066 2.960437572 8.566567835 0.813606775 4.006235180 -0.993666066 5.864215865 6.080376259 3.215694126 9.994209585 0.006190289 9.669348380 10.192349288 9.905969682 5.498088076 9.871581711 12.470972263 9.281777522 3.432505154 3.813586254 11.625767326 1.176131252 NA 1.006262113 1.813606775 13.036395 3.983514 8.283522 13.629659 10.672459 10.444247 12.805517 12.661430 8.702759 10.932131 13.606467 10.786570 9.631487 9.132939 NA 7.570385 11.518111 11.2415014 11.2771143 7.5337121 13.6563879 9.1585198 6.5337128 9.0160636 8.2217679 10.3449297 7.1095225 7.1711418 11.3470588 6.3681782 1.4656611 11.1739668 8.4166865 5.8155216 12.3618615 10.5817743 10.5033384 8.5692408 8.1774121 12.8696954 5.4980881 12.6142444 10.1342294 10.3722841 9.6342248 11.6624365 9.8063260 10.1261488 10.7014634 9.1483421 NA 9.4139968 7.9144473 12.2516392 5.4656676 11.4198630 8.3725573 10.7546376 10.7142412 7.5434534 14.0158232 10.0132624 10.2823595 13.1570137 10.5219349 2.0936954 -0.9936661 10.8434688 10.4254053 10.2910591 TCGA-EW-A1J3 61 0 NA 504 breast stage ia t1c n0 m0 female 2010 NA no infiltrating lobular carcinoma 0 white hispanic or latino NA NA 1 1 2 1 4 4 5 5 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.733986e-07 12.5 16.6666666666667 0 37.5 33.3333333333333 11.0938875 10.0300181 11.9285774 8.5020652 8.9316686 9.4283447 9.9949826 10.4258913 8.8824184 11.9705426 12.2620699 10.5087043 5.9745041 15.8454516 3.8461824 8.1996355 7.6244870 8.8905750 9.2151439 13.7699574 1.0522072 14.3487120 3.0637790 9.5797873 10.9718645 7.1546257 0.7418337 10.6693258 9.6966221 1.5898593 6.6097402 7.5823076 NA 3.8122312 9.4927187 11.2161585 10.1393049 12.4310559 10.5352849 11.2904734 -0.5801375 11.8243924 13.8960610 8.1738680 9.5785257 10.4032659 11.4227311 4.6487358 2.7418337 9.6790708 11.8684195 0.7418337 11.0366946 4.4199164 6.4478222 3.3741075 10.8041601 12.5176190 10.2232400 12.5738638 13.1159055 7.7730627 11.4612329 10.7148440 11.5581878 10.9085093 4.1748059 12.9613152 12.8331473 NA 9.7730629 9.1168835 4.2015398 5.4860064 10.3598625 10.8343370 10.1613830 9.7407166 0.7418337 10.5511299 12.9316687 12.9471487 9.8170559 9.1914055 1.24070000 2.31540000 -0.00537670 -0.00843850 0.00000000 0.52415000 -0.00470790 -0.00470790 0.00208050 0.00208050 0.00208050 0.01628600 0.01628600 0.01614600 3.57090000 -0.75547000 0.00416320 -0.00025993 -0.00110870 0.00000000 0.01223700 -0.74793000 3.65690000 -0.00180140 -0.01670400 -0.01670400 -0.01670400 0.61516000 -0.00221680 -0.00221680 -0.00143650 -0.00110870 0.00000000 -0.01257600 0.52415000 0.52415000 -0.00470790 -0.00470790 -0.00470790 -0.00097017 -0.00097017 0.00208050 0.00180300 0.00180300 0.00180300 0.00180300 0.01628600 0.01628600 0.01614600 0.51298000 -0.75547000 -0.75547000 0.00416320 -0.00025993 -0.00025993 -0.00110870 0.00000000 0.00000000 0.01293400 -0.75279000 -0.74793000 0.42805000 -0.00138580 -0.07787800 -0.01670400 0.61516000 0.00221930 0.00917050 0.00917050 0.000 0.000 0.000 -0.755 0.000 0.000 0.000 0.000 0.000 0.625 -0.128 -0.732 0.000 0.000 0.000 0.000 0.000 1.241 1.241 0.615 0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.755 0.000 0.000 0.000 0.000 0.000 0.625 -0.128 -0.732 0.000 0.000 0.000 0.000 0.000 1.241 1.241 0.615 0.615 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.524 0.524 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.614673040 NA 5.496730769 9.932162625 10.609431788 6.326986682 10.301412397 8.338660180 8.732651466 -0.580137550 11.890829045 11.489976573 4.846182378 4.589841371 3.063779030 7.564574041 3.974501780 10.226465661 10.518606147 11.629369417 9.926719548 -0.580137550 7.422730860 10.248052557 5.732798308 6.049273535 0.419862450 0.004896843 10.789513349 6.277897365 6.737328476 7.293360367 4.911768268 9.678287800 11.273615484 3.419916370 7.660707613 -1.579921884 6.344729095 12.649936469 9.193879400 7.109914211 0.419862450 0.419862450 10.061967725 4.004878871 3.326810560 2.507388726 4.667841045 8.662530596 -1.579921884 9.767537449 NA 8.101154191 10.629064773 9.905242277 4.705319971 10.053365388 12.504060058 8.109914211 3.846182378 2.667846721 11.099396141 2.589835380 NA 0.004896843 -0.580137550 14.694409397 6.070966720 9.021686811 15.845451592 10.057772595 11.236099722 13.769957392 12.927896454 8.644737768 10.450927904 13.758965716 9.994982569 9.679070809 12.224349610 0.004896843 7.660707613 11.254189568 10.6134414 11.3016036 7.4967316 13.9270900 9.4395068 5.6487358 8.4436705 9.4478980 10.2490005 5.3387809 4.5696612 12.2620699 5.3971971 2.4199164 11.5108554 7.9571346 7.7761481 10.1613830 9.8870120 11.1586417 8.8314270 6.8036197 11.6931289 4.3506528 14.6899890 10.1393049 10.5222199 9.8398762 11.1000558 8.6330203 10.8813955 10.7686442 7.7553062 0.4198625 7.9132311 6.8784863 11.8684195 3.0637790 11.0366946 6.5440371 10.9728229 10.8041601 7.2528064 14.0387030 10.5346344 10.1160142 13.0892994 10.6893350 1.7418337 2.8122312 10.9904833 10.2224324 10.1397327 TCGA-EW-A1J5 59 0 NA 477 breast stage iib t3 n0 (i-) m0 female 2010 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 1 2 2 4 4 6 5 1 1 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 1 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 4 1 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 4 4 0 0 0 0 0 0 0 4 0 0 4 0 0 1 0 0 0 4 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 9.987762e-06 3.572012e-06 6.03015075376884 84.6733668341708 1.75879396984925 7.03517587939699 0.50251256281407 11.2040884 10.2715244 12.3862454 10.0764640 8.2326104 10.0817287 10.3109117 9.6641198 9.6400546 9.8821603 11.5919160 10.5904393 3.9808936 13.5868645 4.6285870 8.5847649 4.8813563 8.8397011 9.4009917 12.5463741 4.6739125 13.7456522 7.0880207 9.1654359 10.4997410 8.2071427 1.0740258 9.7804966 8.2262855 2.3959402 7.8154678 7.2288187 -1.9257686 3.9808936 10.4171863 11.2101907 9.6457532 12.5044531 9.5658536 11.7825456 1.3959402 10.6838719 14.8972434 8.9652071 9.4844520 11.2497061 11.9888528 4.7033555 3.9319856 9.3840453 11.8539251 -1.9257686 11.3681906 5.8421844 7.7605011 5.8553594 10.7837306 12.0974951 10.1916437 12.0801513 13.1348654 8.5179799 11.1504822 11.1322258 11.9367348 11.5345844 5.4315528 12.5994602 12.4353276 0.8813514 10.2940765 9.1929418 4.3426614 6.6776266 9.9210580 10.2157884 10.9688183 10.2715244 3.2834477 9.8712567 14.1241893 12.4145462 10.2288187 9.4620180 1.40740000 1.40740000 0.01315800 0.01315800 0.02617800 -0.04297700 -0.01207900 -0.55310000 0.00000000 0.00000000 -0.02154800 0.00036133 0.00036133 -0.01821500 3.65690000 -0.55741000 0.00383070 -0.00057331 0.02084800 0.00063866 -0.01111400 0.47437000 0.47437000 0.47437000 -0.05797700 -0.05797700 -0.05797700 0.45965000 -0.03414000 -0.01772000 0.00897640 0.01315800 0.02617800 0.02021600 0.01097800 0.01097800 -0.01207900 -0.55310000 -0.55310000 -0.03358100 -0.00351720 -0.58278000 -0.00904500 -0.00904500 -0.00904500 -0.00904500 0.00036133 -0.00365560 -0.01821500 -0.60597000 -0.55741000 -0.55741000 0.00383070 -0.00057331 -0.00057331 0.02084800 0.00063866 0.00063866 -0.01111400 -0.57599000 -0.58337000 0.47437000 0.00922710 -0.07890000 -0.05797700 0.46256000 0.00883720 -0.04758400 -0.04758400 0.000 0.000 0.000 -0.539 0.000 0.000 0.000 0.000 0.000 -0.120 -0.576 -0.532 0.474 0.000 0.000 0.000 0.000 0.000 1.407 0.460 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.539 0.000 0.000 0.000 0.000 0.000 -0.120 -0.576 -0.532 0.474 0.000 0.000 0.000 0.000 0.000 1.407 0.460 0.460 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.7232568 -1.9257686 4.5817971 10.9891330 11.7842689 8.0850039 11.2771956 9.5287471 8.5109722 3.5334263 11.7214590 11.6032029 6.3868834 3.1183930 4.8813563 7.9703331 4.5169418 11.3415188 11.4518889 11.8972683 9.7648716 3.8813514 7.9838937 10.1081117 7.8188346 5.6131603 -0.9260427 NA 10.6095190 6.1929418 5.7393378 7.5231495 7.2007054 10.1938107 11.0484151 4.5975610 8.4716752 NA 8.3524500 12.0625965 9.2913524 6.6285899 -0.9260427 1.7744603 9.5897004 NA 1.9809027 -0.3409888 7.4981671 5.5589441 3.8813514 10.2259685 0.0739573 8.1292830 10.2804045 9.7331045 5.4138513 10.3846134 14.6610749 8.6179989 4.9928636 4.2834551 13.0080600 0.6589198 NA 1.6589655 0.6589198 14.8933683 5.6813312 8.5456758 13.5868645 10.4857764 11.0038138 12.5463741 12.7584753 8.5044532 11.2227949 13.5113300 10.6976535 9.3840453 8.5044532 -0.9260427 7.7779043 11.2570156 11.5688561 12.0348170 8.3524500 13.4881873 8.6542590 7.8569988 9.0069535 9.7097187 10.2122308 8.0740007 5.8749002 11.5919160 5.8154678 3.2439280 11.6684418 4.9808890 7.2807949 10.1617949 10.7886754 10.8129373 9.0227767 8.3697696 12.6432035 7.4071556 11.6271379 9.6457532 10.8799459 9.0505648 11.0484151 9.5547909 10.8290968 11.0214549 8.6295482 0.0739573 8.6106362 6.9221538 11.8539251 7.3663222 11.3681906 5.7178573 10.9155355 10.7837306 8.2376502 13.1354562 10.1207836 9.6523732 13.4758801 10.3562203 4.3219281 1.0740258 11.6045289 10.6467008 10.4609408 TCGA-EW-A1J6 70 0 NA 875 breast stage i t1c n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white hispanic or latino NA NA 1 1 NA NA 1 1 1 6 1 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 4.508365e-07 28.9473684210526 10.5263157894737 5.26315789473684 39.4736842105263 15.7894736842105 11.410024 9.719664 10.660155 6.656099 9.607358 8.826024 8.939834 10.369974 8.993540 13.473458 10.159173 10.543800 2.031607 12.004269 4.287945 7.957081 7.100088 8.904711 6.609876 13.167104 2.321120 15.107812 3.385252 10.220884 10.975426 7.741267 2.031607 7.630232 9.996752 2.669049 6.236722 8.029102 NA 2.768565 8.634823 10.060742 10.106047 10.265228 9.411468 11.430827 3.719665 11.306181 13.599512 7.573075 9.811510 10.798322 10.999635 2.669049 -1.138283 9.296312 10.519002 -1.138283 9.949146 4.616569 7.137808 3.906082 11.390138 12.120544 10.520341 10.006979 12.551682 7.700887 11.274253 10.510491 10.727803 10.030356 3.446640 11.860274 12.309154 NA 10.354038 8.783524 4.287945 4.792423 11.047178 11.282433 10.656505 10.193160 1.861678 4.906078 11.768950 11.254269 9.677067 10.016502 0.324950 -0.131220 0.320120 1.130700 0.000000 0.320120 0.318030 -0.545780 0.319800 0.319800 0.333670 1.140500 -0.548850 0.324310 0.324310 0.328820 0.326240 0.322860 0.324790 -0.537840 0.321410 0.312740 0.334150 0.327940 0.272850 0.346000 0.286780 1.160400 -0.559070 -0.534700 -0.519590 -0.556970 0.000000 0.016146 0.320120 0.339500 0.347130 -0.545780 -0.556370 -0.598960 0.356580 -0.575460 -0.537440 -0.535910 -0.541080 -0.569020 -0.548850 -0.583130 0.341450 0.324310 -0.548750 0.342910 -0.559670 0.322860 0.322860 0.317870 -0.539820 -0.557570 -0.537440 -0.561760 -0.567530 0.334150 0.362970 -0.595560 0.286780 0.326890 -0.554070 -0.557770 -0.570560 1.141 0.592 0.324 0.324 0.310 0.310 0.318 -0.538 0.363 -0.208 -0.537 -0.568 -0.255 0.339 0.339 0.269 0.269 -0.541 -0.541 0.327 1.160 -0.554 -0.571 -0.505 -0.505 0.334 0.334 0.000 0.000 0.320 0.320 -0.245 -0.563 0.318 0.318 0.320 0.320 -0.533 -0.533 -0.108 -0.108 1.141 0.592 0.324 0.324 0.310 0.310 0.318 -0.538 0.363 -0.208 -0.537 -0.568 -0.255 0.339 0.339 0.269 0.269 -0.541 -0.541 0.327 1.160 -0.554 -0.571 -0.505 -0.505 0.334 0.334 0.000 0.000 0.320 0.320 -0.245 -0.563 0.318 0.318 0.320 0.320 -0.533 -0.533 -0.108 -0.108 10.1499729 -1.1382828 8.3595352 10.1853013 10.2921360 8.0653009 9.8267463 6.8206998 10.2737028 NA 12.5911981 11.3764937 2.4466532 4.0316069 5.2192344 8.1048577 3.7196654 9.3959865 11.4919507 10.8809268 10.3206028 4.2879450 8.2942256 9.8027312 6.4983083 5.3694770 NA NA 10.0378567 7.1881131 7.8503681 7.8784918 7.7071734 11.4167519 9.8757041 3.3852516 8.0190302 0.4466797 6.9277732 11.1554426 10.2572176 7.9754256 -0.1382828 5.3046279 8.1948391 3.9909639 2.7685655 -0.1382828 6.9806252 6.4391128 2.4466532 10.2758403 NA 9.4428842 10.6556932 9.8180596 5.3852446 10.5380814 12.7826876 8.1119817 3.5055353 3.7196654 11.2437671 0.8617172 NA -0.1382828 2.9491427 11.882624 7.476393 10.006342 12.004269 10.330308 10.254538 13.167104 12.435686 8.634279 10.044078 12.566884 10.979651 9.296312 8.638117 3.183614 7.616571 11.618031 10.2453879 11.5134080 7.6098761 12.0832631 9.1190713 6.4837352 8.9780274 8.7983214 9.6769787 5.8729100 5.9597145 10.1591730 8.8418231 2.8616775 10.7188870 5.9702071 7.2619651 8.1631797 10.6422233 10.7059970 8.1608915 9.7196645 10.3134098 6.8560370 15.6909680 10.1060474 10.7749470 10.5468704 10.8964825 8.8274678 10.8606265 9.4955870 6.3374167 4.9702095 8.2866894 7.0906947 10.5190020 6.1745662 9.9491463 4.5055416 10.3399476 11.3901377 7.0808516 13.6127045 10.6294542 10.6504019 12.1303717 9.7983214 5.6690381 0.8617172 11.2590908 8.1237784 9.6601553 TCGA-EW-A1OV 56 0 NA 789 breast stage iib t2 n1mi mx female 2009 NA no infiltrating ductal carcinoma 0 white hispanic or latino NA NA 4 2 6 1 7 4 1 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.150143e-06 7.282743e-07 12.7906976744186 59.3023255813954 5.81395348837209 17.4418604651163 4.65116279069767 9.8714570 9.1803289 11.5806183 9.3320697 8.0742207 9.8075111 9.1323234 9.9146690 9.5937259 8.7529981 10.0048191 10.6445218 NA 12.4784539 2.5364757 9.9342445 4.1645047 8.8402533 10.0377670 12.1755667 1.0770379 12.8217698 6.2469667 8.9042884 10.5069708 4.5688955 NA 13.4690961 10.5673906 2.2469553 8.7964300 7.0077786 -0.9230305 6.4520798 10.0224849 9.9711009 8.7792137 10.1790167 9.9264462 11.3001377 14.1194272 10.5858262 14.7853436 7.3091262 11.0731614 10.5613604 10.2919672 5.6161989 5.1214341 8.9673052 10.7013796 NA 10.4329427 6.3438271 8.1377371 5.2063228 9.8210340 11.8606532 10.0882683 10.5022569 12.9366729 7.9899303 10.3768215 9.6981771 11.1565258 10.9256640 4.1645047 11.4664035 11.3124569 -0.9230305 10.5653834 9.2889293 3.8849105 6.8779405 10.7086728 9.3249685 9.5848357 9.6713656 1.3989523 8.0798559 13.3671319 11.6210395 10.1159600 10.1444753 0.2194100 0.2262300 0.0068044 0.0013868 -0.2136700 0.0207630 0.2245300 0.2245300 -0.6744400 -0.6691900 0.0031910 0.2249900 2.9654000 0.0196430 0.0114000 0.0114000 0.0072217 0.0072217 -0.6690100 -0.1192600 -0.4303400 -0.3708700 -0.0065050 0.0042761 -0.2340700 -0.2340700 0.1637000 -0.0502350 -0.4339800 0.2194100 0.0068044 -0.4423200 -0.2136700 -0.2136700 -0.4474900 -0.4474900 0.2245300 0.2245300 0.2245300 0.0068044 0.0072217 -0.6744400 -0.1906100 -0.1906100 -0.1906100 -0.1906100 0.4310800 0.4534300 0.0196430 0.0114000 -0.4388600 -0.4388600 0.0072217 0.0072217 0.0072217 -0.6690100 -0.1192600 -0.1192600 -0.4332200 -0.4230900 -0.6619800 -0.0065050 0.0282000 -0.2146600 0.1637000 -0.0502350 0.0274970 0.0243260 0.0310140 0.225 0.421 0.000 0.000 0.000 0.000 -0.669 -0.119 -0.430 0.229 -0.194 -0.429 -0.429 -0.425 -0.425 -0.190 0.000 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.214 -0.214 0.000 0.000 0.225 0.225 0.000 0.000 -0.674 0.000 -0.191 -0.191 0.000 0.000 0.225 0.421 0.000 0.000 0.000 0.000 -0.669 -0.119 -0.430 0.229 -0.194 -0.429 -0.429 -0.425 -0.425 -0.190 0.000 0.219 0.219 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.214 -0.214 0.000 0.000 0.225 0.225 0.000 0.000 -0.674 0.000 -0.191 -0.191 0.000 0.000 7.82187473 8.92879016 5.89722106 11.75586120 10.99478604 6.37707341 11.11115217 10.19353448 8.89171962 3.72090226 11.52076162 11.58305596 2.53647570 NA 0.07710624 7.57688715 4.46935854 11.23344017 11.42770401 10.74237698 9.33206968 1.39895228 9.09106137 10.10632830 9.34616776 6.22678787 0.66202316 1.07703786 10.97941612 5.43459153 6.57688639 7.78784772 5.46935854 10.39878313 10.38253282 3.83192790 9.08406825 NA 7.29136044 12.72708303 7.49489318 7.68437133 NA 3.46935203 8.03414307 4.46935854 4.53647570 1.66202316 9.10770827 4.07703786 5.88439523 10.91348597 0.07710624 7.85511826 11.06501558 9.78612486 7.83192853 11.26933383 13.79064235 9.37281001 7.13773712 5.77748021 9.77226937 0.66202316 0.07710624 NA 3.24697046 10.975642 6.143130 8.550747 12.478454 9.658242 10.622005 12.175567 7.735253 9.948946 10.728541 13.363454 8.631630 8.967305 10.393323 2.246955 7.980923 11.287408 10.989930 12.988714 6.077040 14.559910 9.225518 8.947406 9.810904 8.546683 11.184954 9.413548 8.269334 10.004819 5.007779 NA 11.281001 5.646897 7.929196 11.404594 11.183931 10.727195 6.903589 8.756521 10.149174 9.373957 11.715708 8.779214 10.669031 10.287712 10.662942 10.397842 11.148839 10.473646 8.524124 2.246955 9.509489 8.796772 10.701380 9.943547 10.432943 5.246967 11.760694 9.821034 7.965784 14.519628 9.850180 10.195982 12.911018 11.702293 8.637374 3.831928 10.936576 10.113902 9.525157 TCGA-EW-A1OW 58 0 NA 694 breast stage iia t2 n0 mx female 2009 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.33581629 9.31259439 11.12414303 8.80655091 8.43267092 9.37440333 8.22853012 11.26724726 11.15635079 13.18614768 10.43866961 10.70568940 1.94080572 11.99965513 3.11074742 9.87966227 6.14049033 9.01228009 8.47024848 5.16963643 -1.05919428 9.15998634 7.95483840 9.61501013 11.04148017 4.46438074 NA 11.09436982 11.37388155 -1.05919428 7.39202885 8.16963643 NA 5.16963643 9.86711376 10.40280871 10.09690091 8.74656168 9.52484080 11.37074755 2.74818211 6.75459893 15.46480848 8.54383224 9.46535947 11.49468706 11.31558559 4.43267218 NA 9.14538884 10.68144189 -0.05919428 10.31204988 4.82345896 7.28954586 5.07010162 8.88918512 11.92345492 10.30932423 11.72074232 12.59130864 7.93517094 11.80209860 11.13175049 11.04148017 10.60570952 4.84770633 11.78179238 9.20760446 2.40023734 10.44315242 9.96179781 4.13380187 4.79879708 8.85968107 9.52484080 10.55966206 9.65592189 0.94080572 9.35232885 12.48747115 12.25709933 10.54537101 9.63168873 0.905120 1.700200 -0.301450 0.126260 -0.695590 -0.238940 0.769450 3.656100 -0.153360 -0.153360 0.239230 0.143250 -0.696580 0.082188 0.070960 0.070960 0.119460 0.137020 -0.628500 -0.676370 0.122410 0.096089 0.096089 0.103510 -0.263250 -0.260230 -0.260230 -0.029994 -0.679120 0.117410 -0.200870 -0.288570 -0.699860 -0.707380 -0.694950 -0.694950 0.037076 0.812010 0.005970 -0.657330 0.845540 -0.173070 0.143900 0.143900 -0.657610 -0.642360 -0.696580 -0.696580 0.082188 0.070960 0.083198 0.083198 0.151590 0.137020 0.137020 -0.621790 -0.676370 -0.676370 -0.666790 0.139690 0.096089 0.096089 -0.257330 -0.668360 -0.260230 -0.015054 0.092895 -0.304870 -0.328860 0.127 -0.569 0.000 0.000 0.152 0.152 -0.629 -0.676 0.124 0.118 0.118 0.000 0.000 0.966 0.398 -0.260 -0.260 0.135 0.962 0.000 0.000 0.000 -0.310 -0.215 -0.215 -0.167 0.121 -0.682 -0.682 -0.695 -0.695 0.729 0.000 0.161 0.818 -0.142 0.097 -0.514 -0.658 -0.233 -0.233 0.127 -0.569 0.000 0.000 0.152 0.152 -0.629 -0.676 0.124 0.118 0.118 0.000 0.000 0.966 0.398 -0.260 -0.260 0.135 0.962 0.000 0.000 0.000 -0.310 -0.215 -0.215 -0.167 0.121 -0.682 -0.682 -0.695 -0.695 0.729 0.000 0.161 0.818 -0.142 0.097 -0.514 -0.658 -0.233 -0.233 8.62556639 NA 7.64817708 10.26387256 11.51989799 4.25224912 10.57381303 9.77976170 7.92118578 0.52576822 11.12755107 11.10568705 2.26273381 -1.05919428 4.26274884 9.80345518 3.46438074 10.26668536 11.37100898 11.15301019 9.46829474 -0.05919428 8.80345502 9.43966697 6.24459788 5.49540736 -1.05919428 3.40025100 11.28122427 4.52578074 7.23083705 8.47803626 7.02296696 9.94636520 11.04836181 0.52576822 9.58647616 4.43267218 7.92950224 11.96283876 7.12569346 7.86265843 -1.05919428 0.94080572 8.76418490 5.73523242 3.58467393 -1.05919428 4.64125700 2.52576822 3.84770633 10.46045405 5.88333244 10.89428673 10.97630427 10.48674755 4.36708446 9.46927184 13.30488405 8.25596755 2.11073072 3.69570435 10.48819433 4.22622335 3.02828624 1.52576822 7.75138940 12.59478244 8.25370096 7.55184282 11.99965513 9.19111623 11.44687740 5.16963643 10.27732437 9.15756370 10.93411005 13.12755108 11.19022760 9.14538884 8.59366264 -0.05919428 8.13064212 10.68691218 10.9401132 11.4570103 6.4406632 13.8152214 8.8611707 9.1417163 9.8789271 9.7633887 9.8298958 5.8111833 6.0176324 10.4386696 10.3539168 NA 10.0969009 9.9735523 9.3274024 12.8407411 9.5106734 10.1435539 8.0122804 9.1660252 8.9166656 6.3071407 10.3181151 10.0969009 9.6097027 10.4135086 11.5456026 11.1750365 11.3819464 10.3507390 9.6822848 5.4326722 9.5899752 7.8070457 10.6814419 7.4799767 10.3120499 7.0069072 10.0591295 8.8891851 7.5257800 13.8133003 9.7689543 10.5476856 12.9272821 11.0668769 3.4002510 0.5257682 10.5425886 9.3016649 8.7270873 TCGA-EW-A1OX 43 0 NA 911 breast stage iia t2 n0 mx female 2009 NA yes mucinous carcinoma 0 white hispanic or latino NA NA 2 2 2 2 1 1 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.427581e-07 2.427581e-07 13.3333333333333 26.6666666666667 0 26.6666666666667 33.3333333333333 10.4054838 10.6623922 11.4616580 10.0671613 8.5111047 9.4491918 10.4924671 10.3529157 9.9997744 15.2313340 6.5161460 11.1301711 1.3529280 12.4033313 4.4683943 8.6055814 7.1773438 8.0347401 8.7552174 13.5198634 NA 14.7022894 -1.2320910 9.9949373 10.5119461 9.6437027 0.3528715 4.7903185 7.9846993 3.6748448 6.3678655 5.5228404 NA 4.6008406 10.1419060 10.3032287 10.5476727 9.1309929 10.4787597 11.6348458 NA 10.9904464 14.5809077 8.2267903 10.9406933 11.9869705 11.5265929 5.4261641 7.2993344 9.8326961 10.1926444 NA 11.4237076 1.5753123 0.3528715 2.8554117 10.8705852 11.8405884 9.8881912 11.2677992 12.8494367 7.7133968 11.0306354 10.8582642 11.3718114 11.3235011 4.8123493 11.6910950 11.7578799 -0.2320910 10.2212239 8.6957311 0.8486380 2.0898710 10.3153298 9.8540895 11.5462358 9.9138854 NA 7.2191646 10.9716071 10.2673009 10.1166815 9.2707852 0.7383400 0.8677100 -0.0046961 -0.0027707 0.0178240 0.0160060 -0.0319860 0.0104240 0.0084244 0.0084244 0.0178240 -0.0111980 -0.0111980 0.0183830 1.6455000 -0.9853400 -0.0239770 -0.0085878 0.0274970 0.0063871 -0.0263040 -0.0744110 -0.0744110 3.6569000 -0.1063100 -0.1063100 -0.1060500 -0.0223320 -0.0910230 -0.0129890 -0.0069195 0.0077783 0.0178240 0.0178240 0.0160060 0.0160060 -0.0139530 0.0104240 0.0104240 -0.0192820 0.0013868 0.0075000 0.0141900 0.0141900 -0.0172540 -0.0172540 -0.0111980 -0.0111980 -0.0083005 -0.0936670 -0.9447400 -0.9721700 -0.0239770 -0.0085878 -0.0354480 0.0026357 -0.0107050 -0.0385970 -0.0263040 -0.0172060 -0.0744110 -0.9670300 -0.0069484 -0.1063100 -0.1063100 -0.0223320 0.0200630 -0.0637030 -0.0637030 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.106 -0.106 0.000 0.856 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.106 -0.106 0.000 0.856 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.8461040 NA 3.6748448 10.5228408 12.1752211 7.6413358 11.1128040 9.3734699 8.9007485 NA 9.8360598 11.6002005 4.6505980 5.1429933 3.6748448 8.2618086 3.0898879 10.2350493 11.6990601 10.9706893 9.9227714 NA 7.6413972 10.6200926 5.0158811 0.3528715 2.3529280 NA 9.8784366 8.4136119 2.0898710 7.7104676 3.3529139 9.0015729 10.3867976 0.3528715 8.6912808 NA 6.0253411 12.6963791 6.7104676 7.4958734 NA -0.2320910 8.5688533 4.9378764 2.5753123 NA NA 3.2371813 NA 9.8764778 -1.2320910 5.6986908 10.3444376 9.6875615 3.7221490 7.9627104 13.6537926 4.6986908 -1.2320910 0.3528715 13.3826056 3.0158722 -1.2320910 2.4684009 0.3528715 12.163487 4.767951 8.879089 12.403331 10.313401 10.459697 13.519863 13.428172 8.173095 11.089318 13.343020 9.590524 9.832696 8.839416 2.089871 8.600843 12.491294 11.2670518 12.0416032 7.1166819 12.7089990 8.3510359 0.3528715 9.3148479 7.5261768 10.4911534 1.3529280 9.5468518 6.5161460 7.0111277 -1.2320910 11.1177874 2.0898710 7.0860438 8.6197024 9.6582176 10.9372520 7.5261768 9.6498321 11.7805778 0.7679937 11.1651038 10.5476727 10.9243525 9.8102967 11.3479762 8.7480929 11.0015729 10.6421663 9.0323960 NA 7.9805955 4.2598073 10.1926444 -0.2320910 11.4237076 3.4118059 10.5603369 10.8705852 7.0533557 13.0394893 10.2051851 8.8998104 12.6048912 10.2355588 NA NA 10.5972797 10.7885860 9.6868165 TCGA-EW-A1OY 63 0 NA 908 breast stage iia t2 n0 mx female 2009 NA yes infiltrating ductal carcinoma 0 white hispanic or latino NA NA 1 1 5 2 1 2 1 9 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.525908e-06 3.81477e-07 33.9285714285714 21.4285714285714 3.57142857142857 25 16.0714285714286 9.551492 9.716551 11.279788 8.625095 9.391962 7.927250 10.349734 10.238108 9.450678 14.145164 10.784914 10.766199 2.217603 13.127401 2.954550 9.438910 6.996034 8.714778 10.431371 12.723844 2.047678 13.795492 4.539519 9.256620 11.370721 5.586825 2.954550 9.053291 12.181451 2.507110 7.799210 6.748106 NA 4.333066 9.625095 9.545518 9.169200 9.746371 8.886870 10.582456 7.150955 11.081778 14.110809 7.386714 9.914173 10.521372 11.223840 4.439982 1.632640 8.825744 10.303285 NA 10.475503 6.984305 4.691523 4.295591 9.003316 11.780046 10.368467 11.603454 12.115941 8.305054 10.686102 10.617997 10.818743 10.721859 4.632629 12.429750 11.689492 1.047678 10.469205 10.076954 1.632640 5.295594 8.197414 9.564351 10.825744 10.782376 6.295594 7.621313 11.959807 10.810048 10.324372 9.092060 0.637000 0.623690 0.661240 0.069669 0.247950 -0.370870 -0.384930 -0.360680 -0.473530 0.216530 2.284400 1.009000 0.017963 0.603590 -0.403740 -0.428370 -0.423640 0.148750 -0.368610 0.730190 -0.361470 0.914600 0.212070 1.609500 0.184950 3.656900 -0.054420 1.394500 -0.359200 -0.331100 -0.290710 0.062834 -0.725170 0.263570 0.012516 0.012516 -0.384930 -0.360680 0.756240 -0.010646 0.070386 -1.292900 -0.415420 -0.415420 -0.415420 -0.415420 0.017963 0.017963 0.603590 -0.403740 -0.428370 -0.409040 -0.423640 -0.438970 -0.438970 -0.368610 0.092895 0.092895 -0.077611 0.010242 -0.601190 0.212070 -0.230550 -0.374030 -0.478600 0.563120 -0.686510 -0.032996 -0.399190 0.000 0.000 0.604 -0.428 -0.424 -0.424 -0.369 0.000 -0.371 0.000 0.000 0.313 0.915 -0.372 -0.262 0.000 0.000 -0.137 0.487 0.598 1.253 0.000 -0.399 -0.291 -0.291 0.000 0.000 -0.779 -0.583 -0.371 0.000 0.000 -0.361 0.000 0.000 -1.293 2.294 -0.415 -0.415 0.000 0.000 0.000 0.000 0.604 -0.428 -0.424 -0.424 -0.369 0.000 -0.371 0.000 0.000 0.313 0.915 -0.372 -0.262 0.000 0.000 -0.137 0.487 0.598 1.253 0.000 -0.399 -0.291 -0.291 0.000 0.000 -0.779 -0.583 -0.371 0.000 0.000 -0.361 0.000 0.000 -1.293 2.294 -0.415 -0.415 0.000 0.000 8.04766653 NA 6.20753760 10.70810807 12.36210807 6.66267122 10.90331362 8.24979042 8.45794800 0.04767798 11.15259274 12.45111659 3.36959211 3.29559080 3.63262884 7.77558658 2.74809622 10.07695372 11.12481593 10.81087878 9.07971224 3.69152300 8.53349560 10.26441234 6.00186303 3.36959211 1.04767798 NA 10.79334076 6.86784582 7.03066052 8.13512953 7.00766870 10.69369855 10.27948766 2.95454996 9.03777041 1.85503290 6.72714718 12.63965619 6.64012344 7.22259207 NA 6.64757931 8.71832258 2.36960607 2.95454996 NA 4.25711625 3.96318741 2.04767798 11.50273675 0.04767798 8.30976145 10.17114126 9.59937471 6.16660700 9.85260410 12.34615864 7.57122855 2.95454996 4.04766925 11.22695352 1.36960607 NA NA 4.29559080 11.142407 12.364796 8.515272 13.127401 9.326116 10.878578 12.723844 12.383615 8.579048 10.019928 12.326987 12.088127 8.825744 9.225086 NA 8.444271 11.401365 10.81378119 12.02780601 6.29559447 13.45493287 8.26198535 6.22757551 8.84045662 9.09751494 9.53408923 5.61752183 3.95455927 10.78491379 9.04060481 0.63264048 10.00911619 6.40521806 7.57627648 9.58682515 9.76962002 10.54002039 10.26925352 10.25833778 10.86544957 5.85502043 11.00341074 9.16919997 10.79753589 10.15160986 11.81647103 9.53651086 10.34916267 10.22321594 8.33075468 0.04767798 8.59839387 7.20945337 10.30328519 6.69152300 10.47550303 5.50709690 10.35941476 9.00331636 7.30990194 14.21794362 10.53801593 9.99895113 12.29411014 10.38026245 2.36960607 NA 10.11442832 9.87103366 9.12046885 TCGA-EW-A1OZ 56 0 NA 1229 breast stage iia t2 n0 (i-) m0 female 2008 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 2 5 1 1 4 5 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.179111e-06 3.121176e-07 25 34.0909090909091 2.27272727272727 20.4545454545455 18.1818181818182 9.2156155 9.5186758 10.8776994 9.0367717 10.0071033 8.9974011 9.6296067 9.4470650 10.7882520 13.5790745 9.9876334 10.5699799 NA 17.0668211 2.7120014 9.1070256 6.3158198 7.9235028 8.7273405 12.6595975 -1.5357500 13.6994500 NA 10.1791841 10.9571764 7.4065860 2.5515406 8.5068526 10.1164683 0.0490731 9.2690091 6.8216235 NA 3.4182709 9.1088292 9.7944282 6.8986993 12.2115302 9.8072572 11.2367984 0.7860108 10.3528147 15.2775897 6.4851064 9.0583961 10.4784407 11.0808500 5.4752989 3.9559265 8.6747428 10.3405884 0.0490731 11.0856655 7.8172184 5.6637431 5.3467158 9.4255212 11.7018790 9.5455549 11.3177709 12.6862626 6.7494739 10.3765867 9.8911277 10.3577522 10.1320700 4.7860003 11.9046811 12.1788536 NA 10.2168702 9.1097299 2.5540731 5.8819240 9.9614244 9.5732492 11.0513802 9.2657798 1.2714257 9.1302954 13.6471640 11.0810797 9.9669032 9.1817479 0.0548030 1.0298000 1.0626000 1.7443000 -0.3587400 0.0334080 0.7083200 0.0039533 0.7377700 0.7377700 0.7351100 0.6894300 3.3206000 -0.3819000 -0.3819000 -0.3819000 -0.0206340 0.0539480 -0.7680900 0.7404300 -0.3836900 0.5895500 3.6569000 1.8108000 -0.1680200 -0.1022400 -0.1022400 1.4108000 -0.8097300 -0.5777300 -0.0153290 0.0097276 -0.8017600 -0.3535000 0.0155870 0.0276230 0.7083200 0.0039533 0.0150280 0.5087700 0.5336200 -1.2333000 -0.8152400 0.0185230 0.0015255 -0.0809400 0.0643680 -0.4209000 -0.4674700 -0.3819000 -0.3819000 -0.3819000 -0.0206340 0.2730800 0.2730800 -0.7312100 -0.0364010 0.7087000 -0.3611200 -0.4020400 -1.2929000 -0.8401800 -0.4568200 -0.1680200 -0.1022400 -0.4758600 0.2719000 0.6335300 0.8768700 0.083 -0.359 -0.382 -0.382 0.000 0.000 -0.731 0.709 -0.384 0.312 -0.073 -0.829 -0.829 0.000 -0.351 -0.102 -0.102 0.000 0.000 0.000 0.716 0.254 0.634 0.000 0.000 0.000 0.000 -0.406 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 0.757 0.000 0.000 -0.198 -0.198 0.083 -0.359 -0.382 -0.382 0.000 0.000 -0.731 0.709 -0.384 0.312 -0.073 -0.829 -0.829 0.000 -0.351 -0.102 -0.102 0.000 0.000 0.000 0.716 0.254 0.634 0.000 0.000 0.000 0.000 -0.406 -0.406 0.000 0.000 0.000 0.000 0.000 0.000 -0.439 0.757 0.000 0.000 -0.198 -0.198 7.8127998 0.4640409 5.4752989 11.5896464 12.6423473 7.0727329 11.5301606 8.0078767 8.5140153 2.2714257 11.6036228 11.9036362 2.5515406 5.3467158 2.8563882 7.2714266 4.4182709 10.4200845 11.0541906 10.2633531 10.2918111 2.3709733 7.1258494 10.3709621 6.4182675 5.9478882 -1.5357500 NA 10.1387052 7.8776995 7.0339273 8.3390527 5.2454310 10.8452981 9.2665879 2.2714257 9.5173186 NA 5.8391105 13.4333681 7.3558550 7.4584247 0.4640409 -1.5357500 8.2038521 0.4640409 3.2714257 0.0490731 4.8216235 4.4413507 2.1644967 11.1193786 -0.5359591 6.0339273 10.5505395 10.2355610 4.6928902 10.1400285 12.8900741 8.8574620 2.0490382 3.9235010 10.8434499 3.5515283 NA NA -0.5359591 12.012826 5.003229 8.656364 17.066821 9.122283 10.665276 12.659597 10.350911 8.584309 10.230600 12.857395 10.942335 8.674743 10.486439 1.049003 8.434177 11.401261 11.190715 12.319037 6.830394 13.856220 7.737867 5.683239 9.487826 8.183357 10.860537 7.167975 4.218959 9.987633 5.284251 1.049003 10.724991 8.047154 7.571550 11.612548 9.932695 10.976812 8.325158 8.947887 10.291811 4.873464 11.097796 6.898699 10.616039 9.940311 10.874523 9.468994 10.852358 10.758118 8.566047 -1.535750 9.188159 7.429192 10.340588 4.939805 11.085666 7.452756 10.855315 9.425521 6.458425 13.965784 9.929128 10.042916 11.901173 11.292406 2.856388 2.551541 10.148820 10.285845 8.859606 TCGA-EW-A1P0 55 0 NA 1251 breast stage iib t2 n1b mx female 2008 NA yes other, specify 1 white not hispanic or latino NA NA 1 1 2 2 1 1 1 4 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 1.733986e-07 10 15 0 45 30 10.6687013 9.7227235 11.9818108 9.9351637 8.4076455 8.7219604 10.6949934 9.8903581 8.2619562 13.8390662 11.0371555 11.0901597 3.5926723 8.8698356 2.9252589 8.6451450 4.7685284 8.6273238 9.8957817 12.9860282 -0.1621375 14.3287035 -1.1622989 9.7869163 10.5716526 9.7817698 -0.1621375 10.5456149 8.7019763 3.9670764 7.3691716 6.7143073 NA 2.6451483 9.2598548 10.5788355 9.6563721 9.7766344 9.3346438 10.2258073 11.9918169 11.2974777 14.5326375 7.6785368 10.7027499 11.8575544 11.3092112 4.9875392 -0.1621375 9.2598548 10.3221094 -1.1622989 11.0484613 4.2640560 5.5520358 4.9875392 10.8549464 11.9897578 10.6631463 10.1266561 13.0464054 6.2724189 11.0530196 10.4770357 11.2384026 11.3478123 5.4227510 11.1223249 12.6356541 NA 9.9521830 10.2828048 0.8377818 4.7685284 10.6910995 9.8539018 10.0892724 10.6183297 1.6451483 4.5926783 11.5784140 10.7747959 10.4024159 8.6926584 1.21830000 0.62697000 0.00166420 0.00166420 0.00180300 0.21115000 -0.00512270 -0.75202000 1.84160000 1.77820000 1.80760000 -0.00152430 -0.00740250 -0.00968060 -0.00968060 -0.00968060 0.00305220 0.00305220 0.62497000 0.00083195 -0.76064000 -0.00346270 -0.00346270 -0.00346270 0.00624810 -0.01341900 0.00805670 0.62424000 -0.00429290 -0.00124730 0.64451000 0.00166420 0.04812000 0.68794000 0.24078000 0.24078000 -0.00512270 -0.75202000 -0.75202000 2.38870000 -0.77532000 -0.76962000 -0.00526100 -0.00526100 -0.00526100 -0.00526100 -0.00740250 -0.00740250 -0.00968060 -0.00968060 -0.00968060 -0.00968060 0.00305220 0.00305220 0.00305220 -0.00041585 0.00083195 0.00083195 2.37990000 -0.00470790 -0.00346270 -0.00346270 0.00221930 0.00624810 0.00805670 0.62424000 0.00097064 -0.01174900 -0.01174900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.753 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.652 0.652 0.624 0.624 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 -0.712 0.000 -0.747 2.389 0.000 1.038 1.808 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.753 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.652 0.652 0.624 0.624 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 -0.712 0.000 -0.747 2.389 0.000 1.038 1.808 0.000 0.000 0.000 0.000 9.7446805 NA 3.5382277 10.3505304 11.3601263 8.3127736 10.7131554 8.1316522 8.1325717 -1.1622989 11.2298390 11.7817149 4.6957712 5.6191489 -1.1622989 8.3356418 3.0857136 10.1185608 11.5657104 11.2750219 9.3505304 -0.1621375 8.0448045 10.2677197 6.2128300 4.6191489 NA NA 10.3331454 4.5102151 5.8150707 8.5295336 3.4227578 10.0926414 11.1945170 2.0076978 8.5399625 -1.1622989 7.7019759 13.0979009 8.4707853 5.8264748 NA NA 10.8335571 -0.1621375 4.0472417 NA 5.4524999 4.5102151 -0.1621375 10.4432695 NA 6.1953417 10.1642195 9.8114874 5.0077158 8.8293117 12.5270236 8.1931409 4.2972208 3.3613473 10.8539018 -0.1621375 -0.1621375 4.7685284 2.1597261 13.2232493 3.3613473 9.0998848 8.8698356 10.5532287 10.9427162 12.9860282 10.1272325 9.2869387 10.8374377 13.1009858 11.8913765 9.2598548 7.2343950 0.8377818 7.3846845 11.6832800 10.552894 12.102086 7.648362 13.441122 8.632206 9.684847 8.461671 8.909252 10.134018 6.076196 6.481646 11.037156 5.085718 -1.162299 11.759445 6.977342 6.842291 9.503126 9.512865 11.232788 8.948926 9.065406 9.822920 5.141572 11.465294 9.656372 10.030699 9.929886 10.881842 9.370146 9.906568 10.713539 9.390459 -1.162299 8.927399 8.102045 10.322109 4.047242 11.048461 5.925252 10.579678 10.854946 7.305395 14.331176 10.237068 10.512424 12.780396 10.278659 2.422744 NA 10.716607 10.764086 9.923262 TCGA-EW-A1P1 68 0 NA 1210 breast stage iiic t2 n3b mx female 2008 NA yes infiltrating ductal carcinoma 11 white hispanic or latino NA NA 3 3 4 3 3 4 4 7 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-08 100 0 0 0 0 10.13147618 10.02385843 11.28008370 9.79017823 8.33095317 8.84847679 9.20892932 10.28302259 11.36102508 12.57360975 9.76096456 10.23829821 1.82769710 12.24117220 3.47977380 11.11276724 6.90908423 9.49911000 8.50818063 11.02034044 1.34227027 10.06336771 5.32412293 9.37628604 10.35069713 4.10780502 NA 10.08306122 11.85993792 5.21016674 7.54390259 8.35349577 0.02034218 5.21016674 9.90603675 10.39102787 9.75927720 10.13017116 9.62118265 11.32269376 5.26826969 8.31266200 15.63895537 7.93439678 9.45183814 11.39456489 10.87715497 5.74825995 1.82769710 9.55172191 12.00760447 NA 11.06984869 7.23465938 7.00902463 5.52813369 10.33944797 11.68434323 10.22857485 12.31825978 12.78168391 7.61653047 10.97707961 10.45111187 11.08002289 11.22277039 4.74826263 11.47077848 10.14187391 NA 10.84768316 9.66599884 3.66419837 5.89070447 10.83492291 10.13473357 10.41587463 9.71295596 3.82769710 9.21386584 13.10174067 13.21870875 9.69453271 9.49708659 0.0123760 0.0123760 -0.0080244 -0.0080244 0.0197830 -0.0335410 -0.0234290 -0.0234290 0.0438650 0.0438650 0.1114000 0.0559430 -0.0423810 -0.0417020 -0.0417020 -0.0417020 0.0000000 0.0000000 -0.0468540 0.0693820 0.0203430 0.0077783 0.0077783 0.0077783 0.0087528 0.0087528 0.0365120 0.0043021 0.0123760 0.0123760 -0.0024897 -0.0080244 0.0197830 -0.0415670 -0.0335410 -0.0335410 -0.0234290 -0.0234290 -0.0234290 0.0400440 0.0400440 0.0438650 -0.0210980 -0.0210980 -0.0210980 -0.0210980 -0.0423810 -0.0423810 -0.0417020 -0.0417020 -0.0417020 -0.0417020 0.0000000 0.0000000 0.0000000 -0.0468540 -0.0147420 -0.0147420 0.0203430 -0.0051227 0.0077783 0.0077783 -0.0219210 0.0087528 0.0373590 0.0043021 0.0188030 -0.0317680 -0.0317680 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.6641969 4.6053047 7.4083578 10.3613032 11.1493014 6.2731951 10.0516970 11.5995668 8.3588094 3.6641984 12.3576836 11.4908976 2.3422703 3.4797738 4.1078050 8.3910279 4.1496252 11.2626214 11.2903437 10.5246629 8.7533558 3.8783232 7.8147561 10.0090252 7.5001208 10.2836096 6.3057426 -0.9796578 11.9313579 7.8115031 7.8082428 7.9060367 7.0864292 9.6032445 10.0857566 4.6641984 8.2753689 0.6053047 9.0510077 12.7645436 7.8907051 8.4297314 -0.9796578 5.8147555 8.0783323 NA 4.3057444 7.6892258 6.9090842 4.3057444 2.7207819 10.3045862 2.4797738 10.7802286 10.1360343 9.9846813 6.9332303 10.2076925 12.2871270 9.8196220 2.6053047 4.6053047 10.2676746 NA NA 0.6053047 2.7207819 11.3169699 6.6423926 8.6551514 12.2411722 9.9444106 10.5987131 11.0203404 11.2818478 8.8131309 10.6967383 14.2774704 12.1872881 9.5517219 7.8689633 0.6053047 7.5081806 11.1111145 11.6449075 11.6442220 5.1902672 14.1359523 9.6118629 7.4920158 7.7718843 7.8595441 9.8462374 6.6998209 7.1288646 9.7609646 7.2002493 1.3422703 10.8829778 7.8276952 6.3606364 12.1645207 10.6883390 10.3298169 8.5458614 8.4339684 11.4531433 6.7207805 11.2846452 9.7592772 10.2923870 9.1249391 11.4056636 10.7120840 10.6104596 10.4632839 9.1751585 3.4797738 9.4364307 8.9604190 12.0076045 5.3422703 11.0698487 7.8437075 11.3349237 10.3394480 7.5594995 14.2234590 10.0857566 10.4228197 13.0547955 10.5350545 1.3422703 0.6053047 10.0998253 10.0938126 9.4725816 TCGA-EW-A1P3 48 0 NA 1611 breast stage iia t2 n0 mx female 2008 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 2 1 5 3 4 4 3 5 NA NA 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 6.935946e-08 20 30 0 20 30 9.7879972 8.9150434 11.0244849 7.6203445 9.3052966 9.2322993 9.8042785 9.0516377 9.5799361 12.0157724 11.8009017 10.0823746 2.6162401 13.7807587 5.1568213 9.1398138 7.1398133 8.7585910 9.5275075 13.2656712 1.1568496 14.7774122 3.6803806 9.7910412 10.4877370 5.3065685 0.1567849 8.7970652 9.6284953 2.3267387 7.3711389 7.2175157 NA 3.3267387 8.3928343 10.2389692 9.4035607 10.9348973 9.7464713 11.3094218 12.8258159 11.4088941 13.8696158 7.9851788 10.5804613 10.3084709 11.4983389 4.8292458 5.9381799 7.9283093 12.3087880 0.7417474 11.0912481 3.6803806 5.1791886 4.0637100 10.1554105 11.8940675 10.8744965 12.9253146 12.9905009 8.8042785 10.6945238 9.8380585 11.0860785 10.5830848 3.4047533 12.0210063 11.0535310 0.7417474 10.4645902 8.4142079 3.8578118 4.0637100 10.0934581 9.8310123 10.0318014 9.3928343 2.3267387 9.8555248 13.3928343 11.2359715 9.8441957 9.9601440 0.85561000 0.86255000 0.03693500 0.03693500 -0.02438800 0.00138680 -0.00830050 -0.70451000 -0.11914000 0.12035000 0.16400000 0.00104220 0.00104220 -0.00180140 -0.00180140 -0.00180140 -0.01078400 -0.01078400 -0.17828000 0.50492000 0.01670500 0.50724000 0.50724000 0.45598000 0.01656500 0.01656500 0.00471900 0.03851300 -0.11339000 -0.11339000 -0.02240600 0.03693500 -0.02438800 -0.02438800 0.00138680 0.00041593 -0.00830050 -0.02438800 -0.02137300 0.75586000 0.68533000 -0.11914000 -0.55335000 -0.55335000 -0.55335000 -0.52818000 0.00842190 0.02440800 -0.00250230 -0.00180140 -0.00180140 -0.00180140 -0.01078400 -0.01078400 0.01642500 -0.17828000 0.51455000 0.51455000 0.01670500 -0.65854000 -0.65230000 0.50724000 -0.11835000 0.01656500 0.00471900 0.02508100 0.07887100 -0.64959000 -0.67994000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.515 0.000 0.031 -0.659 -0.145 0.507 -0.109 -0.109 0.000 0.000 -0.113 0.742 0.000 0.000 0.000 -0.650 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.685 0.685 -0.119 0.001 -0.553 -0.553 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.178 0.515 0.000 0.031 -0.659 -0.145 0.507 -0.109 -0.109 0.000 0.000 -0.113 0.742 0.000 0.000 0.000 -0.650 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.685 0.685 -0.119 0.001 -0.553 -0.553 0.000 0.000 9.2548522 NA 5.6959799 11.3832323 11.5838710 7.8984895 10.3078366 8.4588421 9.5853164 2.3267387 12.2269411 11.1629954 4.2442858 0.7417474 4.6162518 7.1902435 3.9117108 10.3404555 11.5157460 11.4059336 8.8624526 5.5491362 7.8572601 10.2535353 6.2121024 7.0875572 2.7417905 NA 10.7539415 7.7114089 6.9960237 7.5956118 8.8006764 11.0500003 10.6049364 4.2012104 8.7604465 1.4787648 7.0875572 11.6947665 9.3892411 7.9960237 -0.8432151 3.3267387 9.0070071 -0.8432151 4.7417852 1.4787648 4.1110146 5.3065685 2.9641768 10.2699111 NA 7.9609512 10.6325535 9.6182996 5.0394631 9.3279969 11.9357186 7.7455345 3.6162518 4.0148016 10.8637478 0.7417474 NA 3.9117108 3.1568173 14.069875 6.296371 8.886441 13.780759 10.177800 11.200189 13.265671 11.819043 9.282699 10.116822 13.636727 9.759519 7.928309 9.446839 1.478765 7.296371 11.942068 10.3753833 12.4479908 6.5576996 14.0019141 9.1497585 4.6162518 8.4047478 8.6764564 9.4576989 6.2963711 6.8915298 11.8009017 6.0148016 0.1567849 11.2292877 8.6862508 6.6822629 11.3518847 10.0294950 11.5453756 9.0333371 9.8015777 9.7436599 5.0637100 13.8495609 9.4035607 10.6182996 10.3478793 10.8834640 9.8641792 9.8433206 9.9398184 7.7152406 NA 9.0650175 6.4643399 12.3087880 5.8006773 11.0912481 6.2757614 10.1847261 10.1554105 6.3267459 13.9098279 10.2369714 10.6446602 12.6935530 10.8585597 1.7417905 1.9641768 9.7861767 10.3472621 9.2349709 TCGA-EW-A1P4 43 0 NA 907 breast stage iia t2 n0 (i-) m0 female 2009 NA yes medullary carcinoma 0 white hispanic or latino NA NA 4 4 4 3 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.387189e-06 4.161568e-07 9.43396226415094 15.0943396226415 5.66037735849057 33.9622641509434 35.8490566037736 9.4012164 9.1905223 11.6197270 9.4869152 8.3442116 9.5985119 9.7467656 11.2236518 10.7626160 12.5938236 10.4088914 10.3787664 -0.3972581 11.5505642 3.6471418 12.2517762 5.4607262 8.8194906 7.3709289 5.7925691 NA 9.1640325 6.4356353 9.1184446 9.4769576 7.0415365 2.3031962 13.1801410 12.7491542 2.4100968 6.6361678 10.6457719 NA 4.3031816 8.6742071 10.4447021 8.8800319 9.4387950 9.7975015 10.6961623 -1.3970681 8.0498279 14.8377491 7.6450603 9.2484032 10.7845181 10.6471387 3.1877044 0.1877677 9.5764420 9.6948410 NA 10.7050485 4.5096325 7.5511122 7.9536837 8.5216079 12.2385761 10.1448093 11.4413577 13.6505928 7.3939078 11.9921071 11.0666623 10.9308585 11.0626885 4.3306660 11.4846233 7.9042408 0.9247080 9.7581954 9.4990771 5.3446155 4.2174556 12.1313209 10.2773783 11.1592507 9.3775318 4.3031816 9.2475022 12.1009706 11.9018095 9.7132279 10.1668942 0.0077783 0.0211830 -0.3302500 0.4434200 0.2437400 1.2905000 0.3780800 0.2777400 -0.0145030 0.0068044 0.6993300 -0.0110600 0.6542400 -0.0494030 -0.3222800 -0.3222800 0.3378800 -0.3614700 -0.0858550 -0.3517400 0.3629700 -0.3350300 -0.3221700 0.9793500 0.3312500 0.3312500 0.3438800 -0.2469100 0.0550880 0.0077783 -0.0106460 -0.3562400 -0.3553700 -0.4084900 -0.3715500 -0.3666900 -0.7469900 0.9420100 0.2984300 0.6978300 0.0000000 -0.0608830 -0.3117800 -0.3117800 0.2704800 -0.3256500 -0.3262300 -0.3262300 0.0095883 -0.3222800 -0.3450400 -0.3484700 0.3378800 -0.3346800 -0.3346800 -0.0024938 -0.3405600 -0.3405600 -0.3541900 0.5700600 -0.3350300 -0.3221700 0.8687100 -0.3336400 0.3438800 -0.3382500 0.2946900 0.0540910 -0.3377900 0.000 0.000 -0.322 -0.322 0.003 -0.335 0.000 -0.341 0.000 0.183 0.183 -0.335 -0.335 0.262 0.262 0.020 0.020 0.000 0.000 -0.338 -0.338 0.295 0.000 0.000 0.000 -0.356 0.443 0.264 0.264 0.547 -0.367 0.285 0.285 0.387 0.000 0.000 0.000 -0.041 0.270 0.000 0.000 0.000 0.000 -0.322 -0.322 0.003 -0.335 0.000 -0.341 0.000 0.183 0.183 -0.335 -0.335 0.262 0.262 0.020 0.020 0.000 0.000 -0.338 -0.338 0.295 0.000 0.000 0.000 -0.356 0.443 0.264 0.264 0.547 -0.367 0.285 0.285 0.387 0.000 0.000 0.000 -0.041 0.270 0.000 0.000 9.0290094 NA 7.4356344 10.9926448 11.2513269 5.9935159 9.9982787 9.6835622 8.6456761 3.1263121 13.7607626 11.6587997 -0.3972581 NA 2.9246700 8.3775316 4.4853882 12.3105352 11.7288037 10.4336560 8.6742071 4.7112691 7.7950377 9.5807400 6.5334824 2.6902159 6.3642958 2.0621908 10.1100437 0.6027419 8.7073433 8.4482349 8.8718714 9.8433630 9.7720433 3.0621735 10.5260721 6.2822248 6.3509374 12.2561496 7.0662690 6.3442125 -1.3970681 1.7726880 7.4761889 2.0621908 2.3031962 0.6027419 5.9777836 0.9390008 9.7569299 11.4859607 2.5096452 9.7588277 11.0567869 9.4157240 7.0905846 9.9241091 13.9276284 9.5685289 4.4356353 4.4607229 11.9018095 1.4101240 0.1877677 2.9246700 4.5569382 12.942931 9.256485 9.323844 11.550564 9.920722 10.990493 5.792569 11.452736 8.325552 11.262518 13.053763 11.882210 9.576442 7.988607 1.187704 8.515634 9.678892 11.249753 11.926362 2.303196 14.639755 8.565641 7.577159 8.345896 6.789502 9.822343 8.143841 5.422923 10.408891 10.112520 NA 10.273843 9.658705 9.614398 12.952441 10.116472 9.907666 7.726866 9.190522 9.269856 7.074420 8.627538 8.880032 9.928612 9.609772 11.900950 11.441358 11.409294 10.201728 9.676886 NA 9.382513 13.138183 9.694841 7.007886 10.705048 6.721686 9.897940 8.521608 8.193668 13.703448 10.711269 10.857478 12.832615 11.267192 3.850669 NA 9.888147 9.793804 8.421327 TCGA-EW-A1P5 77 0 NA 703 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 3 white not hispanic or latino NA NA 1 1 4 2 4 1 1 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.81477e-07 1.387189e-07 46.6666666666667 6.66666666666667 13.3333333333333 13.3333333333333 20 10.3405839 10.3153740 11.8079261 9.7953100 8.8944334 9.9615215 9.7501043 10.3431231 9.4003244 14.3926333 11.2910314 11.2444781 -0.3932735 12.1693213 2.3071662 9.1954357 6.3815083 7.9510171 8.5030533 12.7585305 0.9286546 13.8409398 3.8921190 9.7429561 10.0641020 6.5374592 NA 9.3226831 8.7034361 0.6067265 7.7891156 7.7513794 -1.3932735 2.6067265 9.4870699 10.3002081 11.3467126 11.0356047 9.6081293 11.3422771 1.7766515 10.5601901 14.3199196 7.9786064 10.3507139 11.3073776 11.2729451 5.7462725 5.0661538 8.9958146 12.9992398 NA 10.9858286 4.5609167 6.9990383 4.8921238 10.1115401 11.6877051 11.5168016 11.9109298 12.5778155 8.4300883 10.7669077 10.5543909 10.9387577 11.0615344 5.2360793 11.1090557 8.6822004 0.1916890 10.8210403 9.0671770 1.1747260 6.2287725 10.1075630 8.5374584 10.0738172 9.5022964 0.1916890 10.0615344 12.7571031 10.7539261 10.5038102 9.6707902 -0.1703100 0.6730700 -0.1833600 0.2729500 -0.1866000 0.6186100 -0.1706100 -0.1694200 0.2325600 0.2325600 0.2356600 -0.5851000 -0.5851000 0.2279200 0.2336500 0.2336500 -0.1742400 0.2242400 -0.6511700 0.0071484 0.5516500 -0.6375500 0.2058000 0.2058000 0.0000000 0.0000000 0.0000000 0.2516700 -0.1703100 -0.1703100 -0.1612800 -0.1833600 -0.1866000 -0.1866000 0.6222400 0.6222400 -0.1672600 -0.1706100 -0.1694200 0.2267200 0.2163700 0.2325600 -0.1671400 -0.1671400 -0.1671400 -0.1671400 -0.5851000 -0.5573700 0.2279200 0.2336500 -0.6518300 -0.6518300 -0.1742400 0.2242400 0.2242400 -0.6181500 0.0071484 0.0071484 0.5666700 -0.6389700 -0.6375500 0.2058000 0.2632600 0.0000000 0.0000000 0.2560500 0.2379800 -0.6286500 -0.6286500 -0.585 -0.585 0.234 0.234 0.224 0.224 -0.618 0.000 0.567 0.655 0.655 -0.412 0.206 0.263 0.263 0.000 0.000 -0.170 0.503 0.256 0.256 0.229 -0.629 -0.161 -0.161 -0.183 -0.183 -0.187 -0.187 0.622 0.622 -0.171 -0.171 0.216 0.216 0.233 0.233 -0.167 -0.167 0.000 0.211 -0.585 -0.585 0.234 0.234 0.224 0.224 -0.618 0.000 0.567 0.655 0.655 -0.412 0.206 0.263 0.263 0.000 0.000 -0.170 0.503 0.256 0.256 0.229 -0.629 -0.161 -0.161 -0.183 -0.183 -0.187 -0.187 0.622 0.622 -0.171 -0.171 0.216 0.216 0.233 0.233 -0.167 -0.167 0.000 0.211 9.4269000 NA 4.8161747 10.4197006 11.1888631 7.6781564 11.0155815 8.2101989 9.1508163 -0.3932735 11.1791845 11.8023302 2.9286546 2.6067265 1.4140814 7.6701159 3.4140814 12.2102315 10.9623475 10.2711684 9.4060028 0.9286546 7.2577725 9.7475509 8.2541797 11.0084006 5.9990394 NA 11.0277339 4.2214286 7.1954362 8.4693585 3.4140814 10.6574268 9.8337353 5.3209684 8.8723363 -1.3932735 7.3448134 11.1727751 8.5550883 6.4332700 NA NA 8.7628042 1.4140814 2.3071662 NA 3.3071662 5.7277353 2.5136171 10.3166664 0.1916890 9.1135244 10.5721446 9.9230027 3.8546440 9.6888701 14.7709995 7.6888699 2.6067265 3.4647075 9.8106809 1.7766515 NA 5.0661538 1.4140814 13.945181 5.489363 8.777898 12.169321 9.736648 11.011330 12.758530 12.428694 9.782271 10.557641 12.712793 9.294097 8.995815 10.345658 3.414081 7.078396 11.208492 10.9971588 11.7494664 8.1164963 13.4680969 8.9499069 4.8355401 8.8932788 8.9398765 9.9601491 7.7741393 5.6179479 11.2910314 7.7766462 -0.3932735 9.8295160 7.5982431 7.2266106 10.1732509 9.3320874 10.8442299 6.8063937 9.3303820 12.3903333 4.9817613 12.5534657 11.3467126 10.4759294 9.9871821 11.1610701 9.5739474 10.2465140 10.6259643 8.9173339 NA 9.1646443 10.9047121 12.9992398 3.1302884 10.9858286 7.3106246 10.3456578 10.1115401 7.5376952 12.8846623 10.6572500 9.9127828 12.9967557 10.0470713 1.9286546 -0.3932735 10.4039774 10.5448304 8.6701162 TCGA-EW-A1P6 64 0 NA 562 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 2 white hispanic or latino NA NA 4 1 NA NA 4 1 5 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 6.935946e-08 22.2222222222222 11.1111111111111 5.55555555555556 22.2222222222222 38.8888888888889 10.21623088 9.62773432 11.71275422 9.26419908 8.58761627 8.65734382 10.59503868 8.91469457 8.79948109 12.42471266 10.62386915 10.22837331 6.10417309 12.63471382 3.16926762 9.04180642 6.08180403 8.21879570 8.19814837 12.98361430 5.78224342 13.45528154 6.16926762 9.52153154 12.16262213 4.86316537 -0.91811503 9.02871086 9.93745180 -0.91811503 9.00958260 6.50806888 NA 5.08180403 9.59157957 9.88996446 10.26667997 10.56006863 10.07615809 11.29064862 0.08174865 12.61768746 14.06140843 7.44891334 10.15125443 11.54762609 10.70705684 4.03600213 NA 9.02431913 11.17092402 NA 10.66911333 5.66676795 5.25173045 3.93978135 10.18246698 11.61902301 10.74269191 12.32006006 12.81238088 7.44374836 11.02395252 10.43623036 10.95447951 10.84086052 4.36721029 11.60414093 11.34712664 -0.91811503 10.01844251 10.50439505 4.23317482 5.25173045 11.04758889 10.73150988 10.11729102 11.41970521 6.24167623 9.37297538 12.09617384 12.06051508 9.98191671 9.60144081 0.01922300 -0.00609040 -0.01216200 -0.01216200 -0.03231400 -0.01312700 0.30489000 0.28802000 -0.71942000 2.60630000 2.74080000 0.01433000 0.00853150 0.00000000 0.00000000 0.00000000 0.04145800 -0.03124400 -0.01566800 0.01181800 0.03580600 0.04386500 0.04386500 0.04386500 0.06470600 0.05533100 0.05533100 0.13376000 0.01922300 0.01922300 -0.01078400 -0.01216200 -0.00733390 -0.03231400 -0.01312700 -0.01312700 0.30489000 0.28802000 0.28802000 -0.00678130 -0.01050800 -0.71942000 0.00736090 0.00736090 0.00736090 0.00736090 0.00853150 0.00853150 0.00000000 0.00000000 0.00000000 0.00000000 0.04145800 0.00055459 0.00055459 -0.01532900 0.01181800 0.01181800 0.02134400 -0.68131000 0.04386500 0.04386500 0.00736090 0.12550000 0.05533100 0.14221000 0.01656500 -0.66836000 -0.66836000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.226 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.134 0.134 0.000 -0.668 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.305 0.305 0.000 0.000 1.033 2.741 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.226 -0.681 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.134 0.134 0.000 -0.668 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.305 0.305 0.000 0.000 1.033 2.741 0.000 0.000 0.000 0.000 8.69835359 -0.91811503 2.98870286 10.65355727 11.43935661 6.71305377 11.24922275 8.47596724 8.25730439 NA 11.47331672 11.19762210 2.54124223 1.08181681 2.98870286 8.92729471 3.98869377 9.70110750 11.31572381 10.17851983 9.45249207 5.45684557 7.53713219 10.24041427 6.32973177 4.12619647 -0.91811503 NA 10.86603044 8.51851626 6.76128527 8.27902131 9.25298137 10.40481991 10.12003773 3.40373127 8.58761627 NA 6.86316413 11.94172759 7.96138776 6.05908483 NA 6.14789481 7.90198371 0.08174865 3.47412450 -0.91811503 4.40373127 5.71116173 3.60536395 10.54941013 NA 6.52474856 10.73688802 9.78224440 3.60536395 9.59947402 11.20818643 7.92729442 2.98870286 3.16926762 10.83502140 1.08181681 -0.91811503 1.66675659 0.66675659 12.700421 4.474124 8.863164 12.634714 10.161956 10.212375 12.983614 12.806851 9.338013 10.724759 12.120724 11.113850 9.024319 8.530953 2.541242 7.381012 11.521635 10.991323 12.226622 6.895586 12.793788 9.080395 4.696517 9.745363 8.916276 10.569725 6.533015 7.863164 10.623869 7.047589 2.782241 11.432468 4.725659 6.940408 10.820741 10.115228 10.552464 9.611801 8.909941 10.955249 6.761285 11.296276 10.266680 10.396388 10.016233 11.800337 9.731959 10.831674 10.416078 9.154607 NA 9.235990 7.617080 11.170924 7.047589 10.669113 7.628699 10.396388 10.182467 7.315424 13.900886 10.280863 10.323192 12.246083 10.816091 1.666757 -0.918115 10.379867 10.318417 9.871338 TCGA-EW-A1P7 59 0 NA 915 breast stage iia t2 n0 (i-) m0 female 2009 NA no infiltrating ductal carcinoma 0 white hispanic or latino NA NA 3 3 NA NA 5 5 4 7 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 6.935946e-08 33.3333333333333 0 16.6666666666667 16.6666666666667 33.3333333333333 10.8065309 9.9416987 11.6577473 9.8897709 8.4467682 9.5515427 9.2282215 10.3653628 11.7046594 12.2810088 11.1690269 10.6046637 1.7273977 13.2106915 3.4822675 9.9543938 6.5217951 9.1067579 9.0627699 8.0493078 0.7273542 9.5938858 7.3820153 9.7281894 10.0821799 4.8148426 NA 13.1686852 9.3198365 3.3123457 9.0650014 8.4722136 -1.2726458 6.2111952 10.2991322 10.2991322 9.3494314 10.6935244 10.3775337 10.4646269 5.8148426 9.4015718 15.6458352 8.3965127 10.1127027 11.1638309 10.5814688 4.8771258 -1.2726458 9.4578497 11.0374242 NA 10.7142882 7.7690384 8.0738931 5.9172050 9.5266612 11.3730380 10.1780753 11.9348515 13.1749794 7.7497474 10.6992823 10.4715785 11.1985467 11.1465497 5.1868095 11.6835742 9.3448469 0.3123167 10.8979306 8.8345965 3.9722699 6.8720383 10.7153541 10.7840172 10.2602225 9.4663161 3.8566670 7.8306673 13.5905011 12.5155881 9.8840946 9.8739482 -0.0213390 0.0982700 0.0105640 0.0820430 -0.0706700 -0.0553640 0.0912010 0.1143300 0.0391950 0.0391950 0.0391950 -0.0654470 -0.0654470 0.1112500 0.0341130 0.0341130 0.0831980 -0.0026606 0.3225300 -0.0378980 -0.0646430 -0.0454990 -0.0454990 -0.0454990 0.0414580 0.0414580 -0.0538810 0.0167050 0.0535210 0.0811770 -0.0015243 0.0105640 -0.0689310 -0.0706700 -0.0553640 -0.0553640 0.0912010 0.1143300 -0.0452280 -0.0540160 -0.0721530 0.0391950 0.0252500 0.0252500 0.0252500 0.0252500 -0.0654470 -0.0737490 0.1112500 0.0341130 0.0341130 0.0341130 0.0831980 -0.0026606 0.0265140 -0.1420700 -0.0378980 -0.0378980 -0.0646430 -0.0677470 -0.0454990 -0.0454990 -0.0590000 0.0414580 0.0414580 0.0167050 -0.0667880 0.0907200 0.0907200 0.000 0.000 0.000 0.000 0.000 0.000 0.212 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.114 0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.212 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.114 0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.8121882 NA 5.6100238 10.2563219 10.9019932 6.3315995 10.4872678 10.7382992 8.8976552 4.0849317 11.9569495 11.7515790 5.1367697 2.1868175 4.0127832 8.2800488 4.7497488 11.6056221 11.0802506 10.3730379 9.3820155 4.0493084 8.0560546 10.5144658 9.9965063 7.1153964 4.1536432 1.7273977 11.9400279 6.5539287 8.6888294 8.2548567 8.2568102 10.8611864 10.2484892 6.5411601 8.6161228 5.8566621 8.5838053 13.1701287 8.3272926 7.7273793 -0.2726458 3.3123457 7.6372726 5.1703217 3.4278207 0.7273542 8.5977442 5.6342709 7.1282594 10.2470158 4.4822675 10.0254421 10.6577473 9.6837557 6.9465484 11.4267351 13.9358425 10.2704113 6.0582970 5.8973034 10.1196970 1.0492822 -0.2726458 NA 3.5347340 13.789505 7.026588 8.082731 13.210692 11.266538 10.460819 8.049308 10.998551 9.447624 11.376411 13.647872 10.702869 9.457850 8.113242 1.312317 7.566583 10.729843 10.977086 11.416067 5.186810 14.469845 9.428686 9.105674 8.985946 7.727379 9.652563 10.031731 8.914732 11.169027 10.078871 -1.272646 10.333785 8.147340 6.963777 13.201592 11.512423 10.243079 7.904799 9.170323 10.271378 9.405980 11.297128 9.349431 10.311872 9.800182 11.143649 10.779268 9.730194 10.564613 8.990649 NA 9.670422 8.584085 11.037424 10.942002 10.714288 7.304809 11.265813 9.526661 7.600824 14.550896 9.879030 10.813516 11.694966 11.193201 9.383805 4.342092 10.468425 9.565796 9.364004 TCGA-EW-A1P8 58 1 239 NA breast stage iiic t2 n3b m0 female 2010 NA no infiltrating ductal carcinoma 14 white not hispanic or latino NA NA 4 4 1 1 5 5 2 7 NA NA 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.669932e-07 3.467973e-07 20 20 17.1428571428571 25.7142857142857 17.1428571428571 8.6005522 8.8573568 10.8896048 8.4797366 8.3125250 8.7255282 9.4356142 10.2480806 10.5898558 12.6680526 10.8419447 10.2442487 1.6896570 11.7043003 1.1046721 11.2521143 7.3683580 8.5517805 8.7389033 4.5641281 1.3271125 11.7349645 10.7101769 9.2079851 11.1314514 3.7676654 -0.4803575 9.4615161 11.5617362 2.1047057 9.6438562 7.6896598 3.2201752 4.1344427 9.3597258 11.4719301 9.4046686 9.9657843 9.5972183 10.7661786 4.1921626 6.4504723 14.6358351 9.5201857 9.9115154 10.3609061 9.9724909 3.5197306 NA 9.2044836 9.9034392 NA 8.5140883 4.7676601 7.1527300 6.9750627 9.4326242 12.0878097 10.4408320 11.7126441 12.2325843 7.1121924 10.4905598 10.2289436 10.4688320 10.5861605 3.8772829 11.7462976 6.3010937 1.1046721 10.7844707 9.6236783 3.4009068 6.5476411 12.1557930 9.7818297 10.0150902 9.2000943 0.8416511 8.9227470 12.4866909 12.8289981 10.4786500 9.8022441 3.30150 0.37216 -0.40008 0.40427 -0.38929 0.48940 0.42217 0.39330 -0.39819 1.62780 0.38105 0.39031 0.45547 1.14620 0.41705 0.41705 1.48460 -0.38862 -0.39853 -0.38750 -0.39687 -0.35350 -0.35350 -0.35350 -0.32832 0.41999 1.14160 -0.38653 -0.36397 0.40244 -0.39564 -0.39297 -0.40274 -0.38917 -0.39689 -0.39689 0.42217 0.39330 0.38915 0.41095 0.40611 -0.40518 0.40561 -0.38728 -0.38728 -0.34400 -0.39096 -0.40031 -0.39352 0.41705 0.41705 0.41705 1.48460 -0.38862 -0.40230 -0.38817 -0.38750 -0.38750 -0.38100 -0.38347 -0.35350 -0.35350 -0.42142 -0.32832 0.41999 -0.39375 3.65690 -0.37065 -0.37065 -0.001 -0.391 0.417 0.417 1.096 -0.389 -0.400 -0.387 -0.381 -0.383 -0.383 -0.354 -0.354 -0.387 -0.387 0.092 0.420 0.422 0.422 -0.387 -0.387 0.438 -0.371 -0.396 -0.396 0.011 0.404 -0.389 -0.389 -0.004 -0.397 0.422 0.422 0.406 0.406 -0.017 0.381 0.380 0.380 0.000 0.000 -0.001 -0.391 0.417 0.417 1.096 -0.389 -0.400 -0.387 -0.381 -0.383 -0.383 -0.354 -0.354 -0.387 -0.387 0.092 0.420 0.422 0.422 -0.387 -0.387 0.438 -0.371 -0.396 -0.396 0.011 0.404 -0.389 -0.389 -0.004 -0.397 0.422 0.422 0.406 0.406 -0.017 0.381 0.380 0.380 0.000 0.000 7.8120566 NA 5.1779457 10.9771158 11.1736995 6.6542121 10.9410108 9.2479361 8.0859600 -1.4803575 11.9323047 11.1494671 1.5197432 NA 2.1047057 9.4356142 5.7389029 9.3510421 11.8329014 11.6240060 9.0771987 0.1047392 8.9034390 10.8183703 6.1635913 5.4266271 1.3271125 1.3271125 10.3088609 0.5197432 7.7841774 9.1877334 8.2961678 10.1499474 10.1864027 4.8595870 10.8320506 7.0511165 8.2493557 12.3083513 6.7243065 7.1599803 0.8416511 2.2201752 7.7581399 3.6490176 2.3270837 NA 5.2201752 2.1166642 5.9120534 11.3605128 -1.4803575 11.6541612 11.3268885 9.6451483 4.4739297 10.6432097 12.0173373 9.3076375 4.8947741 5.0115896 9.7946953 2.8416713 2.2201752 0.8416511 4.0433008 12.632419 8.910978 7.636079 11.704300 9.521847 11.137891 4.564128 6.612493 9.548629 11.760973 14.340313 12.249249 9.204484 7.762909 1.104672 7.623023 9.975062 11.2533858 11.8896048 1.9791839 13.8601045 9.2079851 7.8348844 8.7144918 9.0255466 9.9954075 7.7291884 4.2476541 10.8419447 9.1093859 1.8416511 10.3238659 8.7449425 8.4441316 12.2667740 11.1781695 10.2949336 7.6151315 8.4326242 7.8794846 5.7958604 10.0354495 9.4046686 10.0481890 10.6643931 11.7446410 10.9644910 11.4337462 10.4103792 9.0791119 0.8416511 11.0983340 5.4714866 9.9034392 6.4206020 8.5140883 4.9626786 10.6943267 9.4326242 7.8706742 14.4375032 9.9755757 10.7596317 12.4666412 11.6993330 3.4739297 0.1047392 10.5119652 9.6921623 8.8629206 TCGA-EW-A1PA 59 0 NA 575 breast stage iib t2 n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white hispanic or latino NA NA 4 2 4 3 1 1 1 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 7.976338e-07 3.121176e-07 25 18.75 6.25 21.875 28.125 10.581379 9.391582 12.428460 9.669709 8.843256 9.398491 11.051731 10.429665 9.286948 14.453678 10.767122 10.902786 1.203765 12.127805 3.129728 9.974564 5.800670 8.834548 8.203735 13.137056 NA 14.201337 3.203734 9.240458 11.433515 9.108219 2.689165 7.898615 9.713905 2.051720 8.003340 7.890235 NA 5.389601 10.560407 9.494675 9.646678 10.150348 10.395534 11.986569 3.836005 11.913335 14.229843 9.210156 9.772831 11.254671 10.554674 4.129736 5.221657 9.505688 10.316956 NA 10.506602 5.511164 5.904173 4.582249 10.066682 11.561506 9.582246 12.004796 12.918409 8.245941 11.276537 10.616939 11.516617 11.399476 5.436395 12.195965 12.116923 NA 10.456873 8.924834 3.589440 4.969270 9.420965 9.772071 11.555115 9.250313 3.881802 9.799924 12.475898 11.274392 10.169519 9.522955 0.0100060 0.0100060 -0.0018014 0.0037465 0.0157270 -0.0201380 0.0048579 0.0283410 3.6569000 1.4895000 0.0068044 0.0061090 -0.6347200 0.0000000 0.6166100 0.6166100 -0.0027707 0.0175440 -0.6801100 0.0115390 -0.0053992 -0.6487400 -0.6487400 -0.0195890 -0.0305400 -0.0305400 1.6444000 3.6569000 -0.0211570 0.0100060 0.0059700 -0.0018014 0.0157270 0.0157270 -0.6396300 -0.6396300 0.0048579 0.0182760 -0.0635060 0.5786200 0.6099100 -0.6549100 -0.6402900 -0.9491200 -0.6120100 -0.0121620 -0.6347200 -0.0059522 -0.6658700 0.0000000 -0.6475300 -0.6475300 0.0073961 0.0175440 -0.0182160 -0.6358700 0.0115390 0.0115390 -0.0053992 -0.0121620 -0.6487400 -0.6487400 -0.6680900 -0.0305400 -0.6344300 -0.0490190 0.0203430 -0.6562200 -0.6562200 -0.629 -0.629 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 0.000 -0.102 -0.102 0.000 0.000 0.000 0.000 0.000 -0.656 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.619 0.000 0.000 0.610 0.610 -0.655 0.000 -0.628 0.000 -0.120 -0.120 -0.629 -0.629 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 0.000 0.000 -0.629 0.000 0.000 0.000 -0.102 -0.102 0.000 0.000 0.000 0.000 0.000 -0.656 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.619 0.000 0.000 0.610 0.610 -0.655 0.000 -0.628 0.000 -0.120 -0.120 8.7781389 NA 5.0517332 9.9532687 11.1602559 7.7720704 10.1929871 10.1471519 8.4509407 2.9692702 11.2601012 12.9757472 5.8475911 3.7886961 5.7886961 7.7490850 3.6366942 10.2579318 11.5546737 10.6387796 9.2082358 4.4667707 8.3164345 9.1474214 6.4891367 6.2481287 -1.1181005 NA 10.8121742 6.8125431 6.0617157 8.9626239 7.9152293 10.6991179 10.4919085 2.7887066 8.0592260 2.2037336 7.1625776 11.4895991 9.0123770 7.3856321 NA 7.0366242 8.2698238 4.6891594 4.5256617 NA 5.8818065 4.0517288 2.8818016 9.9505848 -1.1181005 8.9248336 9.9172929 9.1344718 5.2911983 10.0391533 12.2713033 7.7826733 4.3412386 3.2037336 13.2960953 -0.1182571 NA 3.4053661 4.0517288 14.6008617 5.8930345 8.8605169 12.1278047 9.4726648 10.0046344 13.1370563 12.1480073 9.7860798 10.8572962 12.3414942 10.4083056 9.5056879 7.5400180 -0.1182571 7.6433577 13.3380325 11.3636059 12.5674312 7.0765634 13.6186813 8.9850942 6.2393579 10.1929871 8.2590168 10.7702719 6.5471429 9.4854327 10.7671215 5.6232728 NA 11.3496667 6.0315540 8.9131766 11.2149618 10.7598573 10.8073609 8.9505848 8.7490850 10.4229030 7.2261019 12.1086731 9.6466780 10.6182084 10.1356539 11.3070223 9.7186457 11.1509331 11.1217032 8.9041743 0.8818212 8.6347054 7.2608377 10.3169558 8.5220514 10.5066018 5.0517332 11.7494172 10.0666818 7.0110897 13.2825525 10.3407256 9.8519124 11.9895139 10.8726195 2.0517201 2.0517201 10.5696194 10.4112369 9.8257863 TCGA-EW-A1PB 70 0 NA 608 breast stage iiia t3 n1a mx female 2009 NA no infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 3.225215e-06 1.040392e-06 5.51181102362205 58.2677165354331 4.7244094488189 21.259842519685 10.2362204724409 9.4310763 8.3570404 10.5285421 7.9401080 8.4755725 9.5244387 8.7302993 9.8014193 11.9003461 12.1226167 9.2684676 9.7159769 1.5382898 11.6352885 2.1757162 10.0434305 7.0229914 7.3823759 8.3225519 4.6162812 -1.6317345 10.4195645 8.3108699 9.5445287 10.6709945 6.5680275 1.3683772 14.1774913 10.4320876 2.0688084 9.2271136 8.1047576 NA 4.0122111 9.1039114 9.1072922 9.1299068 8.7203989 8.7037458 10.4394827 0.6902830 5.3456341 13.6599939 8.8208851 10.4617698 10.1603323 9.5917540 4.5581819 NA 8.8731746 12.5652650 -1.6317345 8.6823721 6.0548550 7.8501550 4.6162812 10.0287972 11.8256082 11.5513705 10.6897200 11.5779612 7.8741668 11.0131131 10.0454144 10.7700351 10.1889335 4.0687912 11.6176171 6.9830654 -0.6317345 11.7301623 8.5231738 1.3916028 6.1692556 11.1915237 10.2247811 9.6497060 8.5320052 -1.6317345 8.1980781 12.0973389 12.0759304 9.9026583 9.8257363 0.5413600 1.4812000 0.0164250 0.5287100 0.4434200 -0.0814720 -0.0556040 -0.0134280 0.3703500 0.3703500 1.2450000 1.0298000 -0.0577890 0.5162900 0.5383700 0.5383700 0.5768300 -0.0368100 1.0034000 -0.0540160 0.3784100 0.4999500 -0.0291750 0.6236900 0.5316900 0.5316900 0.0000000 0.5042900 -0.0550910 0.5413600 -0.0437370 -0.0465830 0.5115900 -0.0804990 -0.0438730 -0.0550950 -0.0572500 -0.0134280 0.0091705 -0.0725410 0.8520500 0.3288200 -0.0304040 -0.0304040 -0.0304040 -0.0355850 -0.0577890 -0.0751170 0.5190900 0.5383700 -0.0538810 -0.1084100 -0.0499920 -0.0395290 -0.0519910 -0.0588660 -0.0595380 -0.0595380 -0.0953840 1.0510000 -0.0525310 -0.0402090 -0.0575200 -0.0704020 0.0000000 0.6249700 2.9640000 -0.0502350 -0.0502350 0.509 0.000 0.516 0.000 0.000 0.000 0.000 0.000 0.373 0.000 0.000 0.000 0.000 0.524 0.524 0.532 0.000 0.534 0.534 0.525 0.525 0.000 0.000 0.498 0.498 0.000 0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.524 0.524 0.318 0.318 0.000 0.000 0.159 0.159 0.509 0.000 0.516 0.000 0.000 0.000 0.000 0.000 0.373 0.000 0.000 0.000 0.000 0.524 0.524 0.532 0.000 0.534 0.534 0.525 0.525 0.000 0.000 0.498 0.498 0.000 0.538 0.000 0.000 0.000 0.000 0.000 0.000 0.524 0.524 0.318 0.318 0.000 0.000 0.159 0.159 8.9598779 NA 2.3683493 10.6715655 11.1045460 8.5296765 11.2488957 8.5610061 8.9754545 NA 13.7440399 11.9205203 1.6902830 NA 1.6902830 7.8359613 7.0894547 12.2365993 11.9102991 10.3247317 8.9876585 2.3683493 9.6744172 10.4113828 8.0194073 10.3972976 5.4768806 NA 9.3983328 -0.0466230 9.3174526 9.2471727 6.4611127 9.9775620 9.7595991 5.8112989 9.5723152 3.3225483 8.2216649 11.0737719 7.9775341 8.4703311 1.1756843 1.5382898 7.9438950 0.6902830 0.9533025 NA 7.2448728 4.3683563 4.4768806 10.7888421 -1.6317345 7.5206407 10.4239770 9.9277326 6.9940649 11.4147975 14.1114543 9.6975912 7.8919173 5.0687955 10.5244386 0.3683772 NA 3.6902830 3.9533211 12.059881 10.068362 8.750980 11.635288 11.092799 12.225267 4.616281 7.692536 9.430955 10.412750 13.304901 11.772166 8.873175 9.292426 3.983067 5.577809 9.932029 10.2329286 11.7546222 3.4127544 14.6127359 8.3934951 7.0372405 8.3035205 5.7946212 8.8491558 8.3167228 5.7170841 9.2684676 10.5787225 -1.6317345 9.7509796 5.2631734 10.9824787 10.8612102 10.7988081 9.9166958 5.8761510 10.4607824 7.5332628 6.6766948 9.2564444 9.1299068 10.7444809 10.0890273 10.3917634 9.8701927 11.0225440 9.8696952 8.0443127 NA 9.8366079 5.8277860 12.5652650 5.3225519 8.6823721 3.3683493 11.0825602 10.0287972 7.6995634 14.2533845 11.5106222 10.1328125 12.4358739 10.6978716 5.1885354 -0.6317345 10.1136097 9.0954250 8.5680279 TCGA-EW-A1PC 66 0 NA 187 breast stage iib t3 n0 (i-) mx female 2011 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 2 2 1 2 5 2 2 9 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 6 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.670339e-06 9.363527e-07 14.1509433962264 29.2452830188679 1.88679245283019 25.4716981132075 29.2452830188679 9.79717352 9.63466587 11.40858736 8.75734834 9.44128904 9.11704071 9.18040052 9.85693637 10.49682093 13.68901096 10.61273159 10.75734842 2.81874833 13.31955769 2.23379605 9.94390419 7.91185813 7.79297245 11.73303448 12.46548769 3.12131386 13.62188453 7.19494690 10.47428454 11.36525767 6.09673413 1.91184495 10.17893768 12.62196526 1.61230531 7.34648625 6.45101654 -2.08804003 2.15979062 10.57985689 11.42398158 9.16924632 10.27297974 9.34909033 10.04210722 2.71920535 7.53207846 14.47484608 6.95422889 9.35324653 10.78607135 11.23688272 4.66674523 -0.08819339 9.70749218 10.15562744 0.23376538 10.13344549 2.86605734 3.74475313 6.02560027 9.89627684 12.22183205 10.40421235 11.70586804 12.67127851 9.06667665 10.83945120 10.00672454 11.08366068 10.74889499 5.48928602 12.06928431 8.30953320 NA 10.93786305 10.05332696 3.16433577 3.61229352 10.75597571 9.95112018 10.26941040 9.60534543 1.37128005 7.04114111 12.11160740 12.05961982 10.47147444 9.22133481 1.3720000 1.2643000 -0.1897400 1.9768000 -0.6484600 2.3115000 0.0000000 0.0000000 0.2041600 1.5279000 0.7844800 0.2530800 -0.1459200 0.2452900 -0.1852100 -0.1852100 0.2421800 -0.1580900 0.0907240 2.3509000 -0.6589200 1.0047000 1.0047000 1.0047000 0.5947600 3.6569000 -0.1677700 0.7723300 -0.1061800 -0.1061800 -0.1645900 -0.1717000 -0.6695600 -0.6825000 0.2438100 0.2580900 -0.0392580 0.0000000 -0.0095772 0.5957800 -0.2418000 0.1649000 1.1050000 0.9312300 0.9414300 0.1191700 0.2812100 -0.6741700 -0.2047300 -0.1852100 -0.1852100 -0.1852100 -0.6250300 -0.1739800 1.7897000 -0.6503400 -0.0323140 -0.0323140 -0.6589200 -0.1876000 -0.2305500 1.0047000 0.1790500 -0.6172900 -0.1677700 0.4315800 0.1224200 -0.1961200 -0.2627500 0.233 0.233 -0.225 -0.225 -0.158 -0.158 -0.650 0.000 -0.659 -0.188 -0.188 0.774 1.005 -0.226 -0.226 -0.168 -0.168 -0.106 1.102 0.382 0.772 0.140 -0.196 0.218 0.053 -1.183 0.793 -0.630 -0.630 2.383 2.383 0.000 0.000 -0.223 -0.223 0.718 0.718 0.931 0.119 0.000 0.000 0.233 0.233 -0.225 -0.225 -0.158 -0.158 -0.650 0.000 -0.659 -0.188 -0.188 0.774 1.005 -0.226 -0.226 -0.168 -0.168 -0.106 1.102 0.382 0.772 0.140 -0.196 0.218 0.053 -1.183 0.793 -0.630 -0.630 2.383 2.383 0.000 0.000 -0.223 -0.223 0.718 0.718 0.931 0.119 0.000 0.000 7.87041096 6.68334837 6.69321791 10.70016893 11.96731032 6.92342138 11.08037386 7.27408737 8.86469440 NA 11.19856051 12.83911183 4.78222507 -2.08804003 1.37128005 8.40971042 3.55571801 11.12966470 11.07645114 11.15160606 10.36923930 4.10168369 8.93491952 10.27571935 5.08178273 9.53984819 2.15979062 0.49682023 10.25615431 5.38759346 6.05140908 8.40270939 8.46548764 10.40965537 10.16924620 -0.50307753 10.14637647 4.68004299 6.48928763 11.78183773 8.18448809 6.32548716 NA 6.95625301 8.43345900 6.70627360 0.71922726 0.91188329 1.37128005 4.14068051 -0.08819339 10.68931926 4.52656966 7.64656807 9.78607126 10.04467935 2.43541524 10.31779754 13.88998788 6.53024401 3.49682023 2.99931456 10.61208134 2.23379605 1.61230531 -1.08804003 5.10168369 8.669248 12.737513 7.086784 13.319558 9.535232 11.306187 12.465488 9.822126 8.819748 10.607087 12.795934 10.550747 9.707492 9.553910 4.744748 8.561115 11.753128 11.509445 12.128756 4.830722 13.699170 8.440312 3.403718 8.570070 10.654799 10.635620 4.900543 2.719205 10.612732 9.706274 2.435415 10.457064 6.827738 8.872447 9.623525 9.611431 10.759894 7.451017 9.302565 10.905328 3.233781 10.829779 9.169246 10.041785 10.275993 11.392396 10.314604 10.931797 10.879085 8.212211 9.606216 9.264001 6.916220 10.155627 3.269407 10.133445 7.310602 10.720219 9.896277 7.727242 13.509911 10.627391 10.394162 12.941448 10.642329 NA NA 10.718207 9.740788 9.804401 TCGA-EW-A1PD 61 0 NA 424 breast stage iia t1c n1a m0 male 2010 NA no infiltrating ductal carcinoma 2 white hispanic or latino NA NA 1 5 4 3 1 4 5 4 4 3 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.838026e-06 4.161568e-07 4.54545454545455 33.3333333333333 1.51515151515152 39.3939393939394 21.2121212121212 10.35479517 10.49097940 11.32321023 9.45777321 8.57798427 9.00413056 10.95345361 10.38752238 10.61074564 14.76492536 9.15527970 10.86821487 1.43333339 14.02826296 3.85959193 9.21959570 6.08437684 8.67650015 10.61851123 12.58600704 0.01834931 13.12605055 4.18821100 8.79800806 11.41167903 3.71872328 -0.56661319 10.56201971 11.33645473 2.13376078 8.77983982 7.27252995 2.13376078 6.01075523 9.23907004 9.50411782 9.15442524 9.93913767 10.33306062 10.91032538 -0.56661319 10.99961800 15.25147133 8.88468155 10.74279110 11.31558700 11.83166898 5.04803560 6.14068460 9.41346567 10.92392628 0.75522943 11.00318169 8.21796109 5.26621684 5.07718317 9.24068092 12.07695682 9.29828600 12.30359446 12.72291274 7.58307299 11.06313800 10.86251834 10.98599516 10.82268857 5.07718317 11.36849113 11.34171867 0.01834931 10.09109113 9.23260776 3.07717462 4.36406110 10.55226716 10.43403039 11.01640885 9.78426529 2.75525080 9.98214795 12.25440245 11.03021467 9.80455828 9.82886019 -0.00166290 -0.00277070 0.00930980 -0.01188700 0.52136000 0.51246000 -0.01656700 -0.01656700 0.07771800 0.07771800 1.15510000 -0.00470790 -0.00769590 0.00249690 0.00249690 0.00249690 -0.54462000 0.50359000 0.00000000 0.01140000 -0.00332430 -0.55287000 0.68663000 1.28250000 0.39595000 0.39595000 0.39595000 0.04854600 -0.55737000 -0.00166290 0.00624810 -0.54229000 -0.06289800 0.01321300 0.02511000 0.02511000 0.00972760 -0.01656700 -0.01656700 -0.00207840 -0.56592000 -0.54159000 -0.48123000 -0.48123000 -0.00221680 -0.51527000 -0.00769590 -0.00769590 -0.54209000 0.00249690 -0.53439000 -0.53439000 -0.54462000 0.00166420 0.00166420 0.00000000 0.01140000 0.02118300 0.00402430 -0.00041585 -0.55287000 0.68663000 0.05893700 0.39595000 0.39595000 0.97090000 -0.00193990 -0.01752900 -0.01752900 0.000 0.000 0.000 -0.534 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 -0.553 0.134 0.000 0.000 0.396 0.396 0.000 0.000 0.503 0.503 0.000 0.000 0.000 0.000 0.000 0.000 -0.489 0.000 0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.955 -0.479 0.000 -0.314 -0.314 0.000 0.000 0.000 -0.534 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 -0.553 0.134 0.000 0.000 0.396 0.396 0.000 0.000 0.503 0.503 0.000 0.000 0.000 0.000 0.000 0.000 -0.489 0.000 0.487 0.000 0.000 0.000 0.000 0.000 0.000 0.955 -0.479 0.000 -0.314 -0.314 7.90093140 0.01834931 5.76424264 10.31214338 12.16485725 6.74257487 10.70449731 10.26145465 8.91353062 3.01829589 11.45569391 11.14751150 4.89275530 3.95688373 3.95688373 8.04619472 3.68125809 9.10840109 12.09465884 10.44245485 8.45152641 0.01834931 8.97345400 10.38533925 7.24068068 8.23907004 5.44455443 NA 10.45465309 5.68125247 6.67173070 7.95884673 6.38169349 10.58201559 10.02625023 2.82564318 9.62869833 0.43327997 7.53661401 12.53997080 8.25030979 8.45291661 NA 7.84483693 7.52343885 NA 4.01828699 0.01834931 3.18821100 4.70423013 1.89274073 10.71496634 0.01834931 8.49672118 10.43684394 9.80183250 5.00317944 8.81486889 11.46364836 7.75525414 2.01827809 3.92518293 12.47831778 4.18821100 NA 1.24068068 1.75527217 12.71540095 8.03880543 8.89582821 14.02826296 10.17886176 10.06404819 12.58600704 13.06700250 8.94568144 10.38424639 12.49756362 11.53135816 9.41346567 8.31444004 0.01834931 7.89889277 11.45621399 11.308883 12.247508 5.623150 13.081795 8.123324 5.303689 8.751869 10.161247 9.909556 5.773176 8.900932 9.155280 7.580531 -1.566613 10.754691 8.687173 9.066058 12.223471 9.924678 10.592882 8.320547 8.554860 11.420412 3.956884 10.624024 9.154425 10.596976 9.680067 12.410427 10.405588 10.774011 10.735394 9.071762 NA 9.075549 7.931896 10.923926 2.825643 11.003182 7.615720 10.706247 9.240681 7.630543 13.120592 9.518134 9.592567 12.881959 11.430153 1.018278 1.603264 10.453959 10.599489 9.798555 TCGA-EW-A1PE 56 0 NA 320 breast stage iia t1c n1a m0 female 2011 NA yes infiltrating ductal carcinoma 1 white hispanic or latino NA NA 3 1 4 3 4 1 5 4 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 6 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.080784e-07 28 20 4 24 24 11.028054 10.072814 11.958889 9.940921 8.209234 9.953001 10.937183 9.567579 10.793162 14.013347 11.037903 10.549944 2.594525 12.735286 3.475876 9.898785 6.506467 8.373120 11.179684 13.376013 2.047050 13.685089 7.834436 9.220940 10.732997 7.856371 NA 10.918822 9.044432 1.153935 8.015481 7.326736 -1.653355 6.223114 10.185800 10.512131 8.659479 12.108563 10.033097 11.904658 1.806035 11.916214 14.740087 8.847039 9.683103 11.610599 11.632143 4.575415 2.047050 9.183435 12.598448 NA 11.320473 5.265459 7.118086 5.781223 10.636615 11.656072 10.040519 12.029700 12.676602 8.004808 10.781485 10.508965 11.585001 11.107316 5.141012 11.865003 8.963145 NA 10.480059 8.834436 3.809960 6.585000 10.211556 10.420403 10.079611 9.915977 2.516519 9.868687 13.250242 11.578117 10.363404 9.111467 0.34974000 0.34974000 0.01810300 0.01810300 -0.33075000 0.00655590 -0.05926900 -0.05276600 -0.11965000 -0.11965000 -0.11965000 -0.00475060 0.00471900 0.00972760 0.00972760 0.00972760 0.00805670 0.00805670 -0.02548300 0.03157700 -0.01178800 -0.68570000 0.00249690 -0.00740590 -0.01656700 -0.01656700 -0.01656700 0.00000000 -0.33214000 -0.33214000 -0.30932000 0.01810300 -0.33075000 -0.33075000 0.01838300 0.01838300 -0.05926900 -0.05276600 -0.06074800 0.01112100 0.00791750 -0.11965000 0.01922300 0.01922300 0.01321300 0.01321300 0.00471900 0.00471900 0.01209700 0.00972760 0.00972760 0.00069327 0.00805670 0.00805670 0.00805670 -0.02548300 0.02132300 0.02132300 -0.00041585 -0.69378000 -0.68570000 0.00249690 0.01363200 -0.01937500 -0.01656700 0.00000000 -0.02425100 -0.00456950 -0.00456950 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.686 0.000 0.000 0.000 0.000 0.000 -0.332 0.350 0.000 0.000 0.000 0.000 -0.309 -0.309 0.000 0.000 -0.331 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.694 -0.686 0.000 0.000 0.000 0.000 0.000 -0.332 0.350 0.000 0.000 0.000 0.000 -0.309 -0.309 0.000 0.000 -0.331 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 -0.120 -0.120 0.000 0.000 0.000 0.000 8.3007923 -1.6533551 6.4340594 10.6651388 11.1048192 7.0842822 11.9751554 9.5427125 9.1080641 1.5165195 12.2211932 11.3208582 2.9315507 2.2534750 2.9904467 7.5339480 4.4758761 12.5482605 11.9553128 10.7908344 9.1507270 7.7749564 7.4072916 10.5511671 7.7874651 4.6320006 4.5165195 -1.6533551 11.2598594 5.9240239 6.6273661 8.3451866 8.6215563 10.4337141 10.2527350 5.2045751 8.7161932 -0.6533551 7.7728609 11.5523892 8.8730952 8.1889463 -0.6533551 8.1328657 8.2200402 6.4551200 2.8701674 0.3466449 5.9011855 5.6818962 3.9011855 9.7232640 0.6684822 7.0048070 10.5045744 9.7112779 5.3123820 10.4564266 14.7836490 8.8711376 4.6133843 3.9613085 13.5070583 4.1279551 -1.6533551 1.8060353 1.5165195 13.511660 5.401880 7.995852 12.735286 10.615138 10.275114 13.376013 12.381223 9.430527 11.053524 13.286772 9.087220 9.183435 8.404588 -1.653355 7.101483 12.281116 11.1924780 12.1714553 7.9240250 13.4904965 8.8652492 6.4498832 8.6775128 8.8632809 10.5049722 7.8142018 8.4300753 11.0379033 6.5462679 0.3466449 11.1002306 5.0330970 8.3673121 10.9476703 10.7292200 11.2602334 9.1031522 8.7172833 13.8052269 8.1999054 11.6172928 8.6594790 10.9702489 9.9362472 11.7156480 10.5474946 9.7807030 10.9138390 9.5980784 NA 9.9877446 7.4677408 12.5984482 8.5401215 11.3204727 7.3661867 10.3954234 10.6366148 7.2978810 12.0780211 10.2242635 10.3978049 13.4115071 10.1098083 3.7389083 2.6685276 10.3220858 10.7686607 9.4803805 TCGA-EW-A1PF 50 0 NA 439 breast stage ia t1c n0 m0 female 2010 NA no infiltrating ductal carcinoma 0 white hispanic or latino NA NA 4 3 NA NA 3 4 4 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.8212032 10.3464109 11.6727981 10.1009734 7.8939404 9.1566113 10.4770832 9.6834126 10.2206625 15.2449968 10.3709242 10.8306409 -0.4745324 12.4686816 3.3834140 9.5394547 5.4912182 8.5268423 9.3018672 12.5797841 -1.4747329 12.5867210 4.5698313 9.0516889 10.9485500 7.4738015 NA 9.8085225 9.2977488 1.5254174 8.3677847 7.5861305 -1.4747329 5.8473631 10.1484011 10.3226904 7.9432867 11.6672220 10.3799130 12.0485060 3.6547219 10.6585764 15.3158972 9.2062508 10.5016403 11.4126548 10.7974807 5.0011672 7.8719477 9.1969753 11.4400061 0.1103632 11.2796954 5.0172895 6.1978595 5.3067945 9.9714836 11.3561474 9.9364155 12.4485759 12.8242127 8.3927128 10.4285628 9.4566591 11.3685701 10.8846346 4.7733634 11.5025352 11.8792702 -1.4747329 10.5622946 8.8829863 3.0521376 5.6234660 10.4202520 9.7840002 10.4879687 9.9198969 2.7733634 6.9432873 12.6851478 11.1940976 10.4046345 9.5289520 0.01223700 -0.41421000 -0.00080357 0.03425400 -0.01560400 0.00000000 0.23241000 -0.01050800 -0.41762000 0.00180300 0.44139000 0.00013863 0.00819590 -0.40385000 -0.40385000 -0.40385000 0.00750000 0.00471900 -0.41981000 -0.41531000 0.01070300 -0.39241000 -0.39241000 0.01698500 -0.03385700 -0.03385700 0.79220000 0.51943000 -0.39542000 0.01223700 -0.41762000 -0.00080357 0.01572700 0.39413000 0.00000000 0.00000000 0.04340800 0.05323600 -0.00498440 -0.00484610 -0.00567570 -0.41762000 -0.06168900 -0.06168900 -0.06168900 -0.06168900 0.00819590 0.00314940 -0.40385000 -0.40385000 -0.40874000 -0.40874000 0.00471900 0.00471900 0.00471900 -0.41849000 -0.41531000 -0.41531000 0.01070300 0.03242200 -0.80360000 -0.39241000 -0.41937000 -0.08275400 -0.36805000 -0.03844200 -0.00152430 -0.37448000 0.05865200 0.000 0.000 -0.404 -0.404 0.000 0.000 -0.418 -0.415 0.000 0.000 0.000 -0.392 0.000 -0.409 -0.409 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.404 -0.404 0.000 0.000 -0.418 -0.415 0.000 0.000 0.000 -0.392 0.000 -0.409 -0.409 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.418 0.000 0.000 0.000 0.000 0.000 7.9048128 NA 5.7053421 10.9257800 11.2612017 6.8602887 11.1643226 9.7667381 8.9687713 3.7348830 11.8654233 11.5541570 3.5254300 5.0332292 4.5478015 7.9766455 4.2533540 10.5708525 11.3149678 10.3104779 8.7992298 5.9004732 7.8451061 10.3456132 7.3740570 5.8829853 -1.4747329 NA 10.4756255 6.9516985 8.3051534 7.8541091 6.3456128 10.7779045 10.0684659 4.5698313 9.2499480 -0.4745324 8.0800228 11.9625360 8.5861301 8.0172872 1.1104301 6.1474858 8.1103967 1.5254174 4.9848673 0.5254676 5.5254331 4.9016875 3.8473656 10.6287219 1.1104301 8.4825361 10.4915791 9.7518463 5.4202533 9.7121674 12.3543640 8.7336685 2.3327938 4.6339601 10.7509429 3.6128950 NA 0.1103632 3.4796315 12.319748 6.169290 8.991001 12.468682 9.428563 9.528952 12.579784 12.814589 8.559766 10.870562 13.019852 10.455432 9.196975 7.473802 1.332794 6.860825 12.658416 11.469414 12.238391 7.270268 14.039037 9.025280 6.147486 8.966303 7.539454 10.471843 7.533863 9.202273 10.370924 7.300222 2.917756 10.286154 6.140145 7.914657 11.870839 10.379523 10.291963 8.058764 8.725106 12.542068 6.943287 10.304850 7.943287 9.873056 9.100028 11.484712 10.649555 10.772472 10.881336 9.356741 -1.474733 9.853060 7.612181 11.440006 7.106635 11.279695 8.017287 11.548669 9.971484 7.332789 13.341368 9.987936 9.513409 12.614222 10.460231 4.525436 1.525417 10.515538 10.065078 9.612897 TCGA-EW-A1PG 53 0 NA 1051 breast stage iib t2 n1a mx female 2008 NA no infiltrating lobular carcinoma 1 white hispanic or latino NA NA 3 3 4 3 3 3 4 3 4 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-07 3.467973e-08 33.3333333333333 16.6666666666667 0 0 50 10.8791432 10.3220526 11.6174624 9.9005666 8.0952952 8.9721467 9.4749272 10.2571013 10.6778267 12.4364757 10.4760469 10.5692262 3.6034424 12.8284302 3.6034424 10.9573907 7.9187977 9.0097435 9.9784814 12.3692177 2.7289653 12.1555870 5.8854767 9.1474438 10.2407255 6.9319123 -0.8559536 7.6870418 9.2407255 3.7289762 8.1884044 10.1418955 0.1440464 4.6034424 9.9776911 10.5352539 10.0019913 11.3731295 10.1482307 11.4880287 13.3906025 10.2629514 15.0901627 8.3101233 9.5331039 11.3886715 11.8831580 4.2732921 2.6034305 9.6587244 13.1626452 NA 11.7916936 5.8719299 5.6831687 3.9513640 10.5581670 11.9142612 9.9376136 13.3571905 13.1365947 7.6278264 11.1639484 11.0129717 11.3815191 11.5563155 4.8444509 12.1798404 12.3347610 1.4659222 10.6923506 9.7596399 3.8466638 4.6986019 10.9121946 10.6029295 10.4999119 9.7887679 3.1440137 9.2668383 14.2979581 13.6561952 9.0879902 9.1965783 0.07988000 0.07988000 -0.00110870 -0.00110870 0.00041593 -0.00249380 -0.00166290 -0.00166290 -0.00166290 -0.00166290 -0.00166290 0.00708260 0.00708260 0.00241140 0.00241140 0.00241140 0.00000000 0.00000000 -0.00401620 0.13746000 -0.00581400 -0.01821600 -0.01821600 0.13288000 -0.00816240 -0.00816240 -0.00816240 0.00069327 0.07988000 0.07988000 -0.00296710 -0.00110870 0.00041593 0.00041593 -0.00249380 -0.00249380 -0.00166290 -0.00166290 -0.00166290 0.00097064 -0.00733390 -0.00166290 0.16513000 0.16513000 0.16513000 0.16513000 0.00708260 0.00708260 0.00241140 0.00241140 0.00241140 0.00332990 0.00000000 0.00000000 0.00000000 -0.00401620 0.13746000 0.13746000 -0.00581400 -0.19262000 -0.01821600 -0.01821600 0.00069327 -0.00816240 -0.00816240 0.00069327 -0.00429290 -0.01477800 -0.01477800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.137 0.000 0.134 -0.058 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.165 0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.137 0.000 0.134 -0.058 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.165 0.165 0.000 0.000 8.1663780 -0.8559536 5.8988976 9.9245501 10.6562570 5.7676733 10.0554023 11.2571566 7.9301164 0.1440464 12.6663466 10.4976313 1.9513640 0.1440464 4.1884009 8.7345975 1.1439811 10.7162368 11.6680622 10.6802575 9.2720045 2.6034305 7.6714873 10.3655974 6.2100985 6.6034424 2.9513640 NA 11.1636011 3.3919327 8.0658512 8.2655438 6.8988976 9.2219208 10.1552376 3.1440137 7.8479136 NA 8.4905240 12.9944902 6.7587202 6.2835625 -0.8559536 2.4659484 8.2020018 0.7290089 3.6034424 4.1884009 3.1440137 3.6819327 2.6034305 10.5352539 1.1439811 11.2697466 10.5255532 10.1573330 5.0747495 9.4636823 11.8296351 7.8234902 0.7290089 4.0509021 11.1819004 1.7289653 NA -0.8559536 2.6034305 12.7993554 4.3139351 8.5037598 12.8284302 10.0887224 10.6493256 12.3692177 12.2004787 9.2301466 10.9224982 13.6410513 12.6501939 9.6587244 9.5341793 -0.8559536 7.6034416 11.1155538 11.3827136 11.8823137 5.8988976 14.5008725 9.4534867 5.3534644 9.1691498 7.1155535 10.2428780 4.8719323 5.8988976 10.4760469 6.6518051 5.8854767 11.6775834 7.6518051 5.2720568 13.2725686 10.3565067 10.8256879 9.3716262 8.0688229 11.9117810 5.5534004 11.9044704 10.0019913 10.5869538 9.6438562 11.2652200 10.1454185 10.9376136 10.8093462 9.7457810 -0.8559536 9.2315128 8.7607063 13.1626452 6.9319123 11.7916936 7.6909045 11.1803694 10.5581670 7.0569000 14.4758020 10.2148021 10.6408641 13.7621090 10.2400666 3.5363265 NA 10.7710881 10.6182232 9.6024170 TCGA-EW-A1PH 52 0 NA 607 breast stage iia t1c n1a m0 female 2010 NA yes infiltrating ductal carcinoma 1 white hispanic or latino NA NA 4 4 NA NA 5 5 2 9 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 1.040392e-06 2.427581e-07 32.5 20 0 22.5 25 9.7961191 8.9490572 11.0175926 8.6562754 9.1361711 8.5822749 9.3471713 10.5378702 10.0685731 13.3148440 10.1985334 10.9342602 3.5713856 12.6147867 1.9864109 8.1175797 6.7019177 9.2029495 10.5635095 -0.4729297 NA 8.0525132 8.9106967 9.5320485 11.3942712 7.1708484 1.3343394 8.6024717 11.6540195 1.9864109 7.6792774 7.2684597 -1.4731299 3.6144507 9.0017125 10.7379681 10.4963790 9.1636170 9.2108644 10.6127968 0.5269702 7.0347869 13.9899100 7.5597549 9.9699307 10.9350567 10.0012054 3.7364425 -1.4731299 9.8729520 9.6918993 NA 10.7509941 5.9448444 6.8170118 4.6969175 10.0815813 11.9643544 9.7914350 11.4628941 13.2885956 6.7890876 11.1796134 10.8934321 10.6808611 10.7294224 4.5269952 12.2470229 10.7766985 6.6302802 9.5206385 11.3695392 3.0511807 4.3598796 9.4495768 10.1222499 10.6843393 10.3981276 0.8489584 9.1949910 12.8944754 11.2797912 9.7509942 9.6741974 0.3145000 0.5512400 0.1250500 0.7111400 0.6097300 -0.4295600 0.7817600 -0.0156040 3.6569000 -0.9652400 2.1270000 1.0319000 -0.0065050 -0.0223320 -0.0223320 -0.0223320 0.0058309 0.0058309 -0.2733200 -0.4477100 -0.4338700 0.0188030 0.6527700 0.3637900 -0.1828200 2.8868000 -0.0972320 0.4006100 -0.2407000 -0.2392400 -0.4644000 0.1250500 0.0151680 -0.9491200 -0.6551100 -1.2929000 0.7817600 0.1631000 -0.0161540 0.0079175 -0.0580580 -0.5454200 0.4188100 0.3966200 -0.1551500 -0.1911200 -0.0065050 -0.0065050 -0.3745900 -0.0223320 -0.0223320 -0.0223320 0.0058309 -0.1921200 -0.1921200 -0.2480000 -0.4487100 -0.4487100 -0.3134200 0.0493980 0.0075000 -0.2125500 0.0987060 -0.4645100 -0.0972320 0.0125160 0.4754700 -0.4351800 -0.4680600 1.032 0.000 0.000 0.000 0.000 0.000 -0.248 -0.449 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 -0.188 3.657 -0.239 0.237 0.178 0.000 0.421 -0.426 0.000 0.000 0.125 0.125 0.000 -0.388 0.000 -0.638 0.000 0.000 0.000 0.000 -0.546 1.381 0.397 0.241 0.000 0.000 1.032 0.000 0.000 0.000 0.000 0.000 -0.248 -0.449 -0.434 0.000 0.000 0.000 0.000 0.000 0.000 -0.188 3.657 -0.239 0.237 0.178 0.000 0.421 -0.426 0.000 0.000 0.125 0.125 0.000 -0.388 0.000 -0.638 0.000 0.000 0.000 0.000 -0.546 1.381 0.397 0.241 0.000 0.000 7.5410130 -0.4729297 6.0815804 10.7047234 11.6423613 4.8611316 10.1649758 9.2835236 8.0302417 NA 13.0740074 11.3303204 7.3787414 NA 3.3849754 9.7630067 3.6969175 10.2591598 11.6430114 11.0782200 10.0168405 3.5269952 8.0067726 9.5064177 5.7937789 8.8668425 2.1119661 3.3849754 10.9406204 1.9864109 7.3214086 7.9300046 8.8341932 9.1707766 10.1595333 0.1119661 8.8007880 7.8170111 7.8284888 12.4885326 7.3787414 5.5493611 -0.4729297 6.1417025 8.2835486 7.2583116 3.0505539 -1.4731299 5.3471731 4.1994211 6.9406202 10.9566607 5.3343466 9.6124649 11.2397344 10.8147048 4.6144566 10.2498000 14.2939871 9.8856436 2.6144507 2.9864291 10.4092533 2.1119661 5.2818800 2.5269952 5.6562761 12.1951162 10.7355317 8.8307731 12.6147867 9.6918993 11.2758143 -0.4729297 10.3744414 9.1444599 10.6959779 13.5429301 11.3722865 9.8729520 8.3132622 1.8489183 9.5700198 10.2321928 11.098508 11.060809 4.308354 14.127368 8.945899 8.030818 8.977173 8.980263 10.085471 5.593082 4.170846 10.198533 9.893315 2.334339 10.315711 8.593081 8.698607 11.917161 10.051044 11.046137 8.288544 9.384196 6.884544 7.156349 10.990246 10.496379 9.735836 9.698795 11.583630 11.455326 11.650952 10.513901 8.770166 1.334339 9.032893 7.053609 9.691899 7.115707 10.750994 6.676740 10.554971 10.081581 6.876031 14.285398 10.296417 10.679277 12.289790 10.912316 5.645932 5.111954 10.523113 10.053981 9.948531 TCGA-EW-A2FR 59 0 NA 1673 breast stage iiic t1b n3a mx female 2008 NA yes infiltrating ductal carcinoma 19 black or african american not hispanic or latino NA NA 1 4 6 1 2 2 2 9 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.31783e-06 2.080784e-07 13.3333333333333 35.5555555555556 2.22222222222222 33.3333333333333 15.5555555555556 9.8382851 10.0749232 11.0892944 9.5035372 8.1392628 9.4169311 8.3435633 10.8790650 11.1041136 13.9795386 9.4969646 10.6391426 -0.7372061 17.4990428 3.4326655 10.2450265 4.0956375 8.9855534 6.4963649 11.3671809 -1.7374466 11.5846740 5.4624188 9.4977788 9.6973742 4.6377841 NA 11.5842654 11.4196190 3.1207335 8.9864070 8.1711388 -0.7372061 5.5846739 9.7155020 10.5753452 9.7505859 10.2256419 9.8486474 10.9334022 12.5836169 8.9544895 15.9753468 8.4205856 9.8843400 10.9936405 11.0719111 5.5106740 4.9209554 9.0547226 11.2994347 2.1696364 11.4565792 5.9422259 6.6377856 6.0042137 10.1916343 11.5998102 10.3865440 12.3602020 12.6941129 8.5400335 11.2778124 10.3291378 10.9289699 10.5094865 4.4525691 11.1373431 10.3458928 -0.1523237 10.6301606 9.4054912 3.0187054 5.6973735 10.9904537 10.2913427 9.9240787 9.4891582 3.3920289 7.6180969 13.1464870 11.8353277 9.7216650 9.7799232 0.1651500 0.1670000 -0.1402600 0.0559430 -0.1178300 0.0546600 0.0548030 0.0542810 2.0601000 -0.3134500 0.0055529 0.0161460 0.0161460 -0.1115500 0.3047300 -0.2857200 0.0480480 0.0803120 0.0000000 -0.1557900 -0.1009200 -0.1153500 3.6569000 -0.0809400 0.3747900 -0.2556400 -0.1006600 1.9310000 -0.2563600 -0.2563600 -0.1200400 -0.2852500 -0.1178300 -0.1178300 0.0546600 0.0546600 0.0548030 0.0542810 0.0542810 0.0682350 0.0494360 -0.4701400 -0.1076200 -0.1076200 -0.1076200 -0.1076200 0.0161460 0.0161460 -0.1115500 -0.2785800 -0.2613100 -0.2613100 0.0480480 0.0803120 0.0803120 0.0000000 -0.1356100 -0.1142900 -0.1009200 0.0777180 -0.1153500 -0.0809400 -0.1212100 -0.2407000 -0.1886100 -0.2624000 0.4527500 -0.0941960 -0.0941960 0.000 0.000 -0.261 -0.261 0.000 0.000 0.000 -0.114 -0.101 0.000 0.000 -0.115 0.000 -0.121 -0.121 -0.189 -0.189 -0.089 0.167 -0.211 0.000 0.453 0.000 0.215 0.095 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 -0.470 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 -0.261 -0.261 0.000 0.000 0.000 -0.114 -0.101 0.000 0.000 -0.115 0.000 -0.121 -0.121 -0.189 -0.189 -0.089 0.167 -0.211 0.000 0.453 0.000 0.215 0.095 0.000 0.000 -0.118 -0.118 0.000 0.000 0.000 0.000 0.000 0.000 -0.470 0.000 -0.108 -0.108 0.000 0.000 8.0587857 6.9562333 6.0042137 10.9999932 11.6281114 6.3324376 10.6890106 9.4915766 8.8611893 -1.7374466 12.3013220 11.7801975 2.7221818 -0.1523237 4.4525691 8.3234417 4.4915645 11.1707631 12.6640254 10.5804412 8.9474946 1.8477164 8.2357256 9.9644856 6.8057774 6.1514895 4.5295336 -1.7374466 10.8072274 3.3502143 8.3288351 8.2781609 8.5812887 10.4117404 9.6317978 4.0176369 8.1979111 0.2627939 8.3997372 12.3475543 8.6550634 9.1853304 -1.7374466 4.1207252 8.3803892 1.4326922 3.5106708 -1.7374466 5.5201331 4.1708384 2.6550541 11.7635878 6.5619539 9.1331106 10.3462253 10.2180326 4.7056904 9.8705386 12.3502087 8.8467688 3.1207335 4.9351721 9.9378208 5.3395614 -1.7374466 NA 2.7863036 12.4359624 6.8134926 8.7108622 17.4990428 10.3378908 10.6829693 11.3671809 10.5742104 8.6763739 10.5975778 13.3640650 7.9011819 9.0547226 8.9898154 0.5846739 7.1875579 11.8005710 11.6649586 12.8187729 4.9631874 13.5596238 8.4289091 5.5388702 9.4067667 8.3234417 10.4059059 7.1423287 7.3125944 9.4969646 7.1238327 4.5295336 10.7311153 9.5023443 7.4198658 12.7288224 10.0579739 11.3599550 8.7067253 9.2443132 9.6081511 5.9769914 11.1983677 9.7505859 10.2694226 8.9804224 10.9494653 10.3643934 9.9864068 10.3102107 8.9474946 8.1222808 9.8244444 8.4496031 11.2994347 6.2570993 11.4565792 10.2418137 10.5839694 10.1916343 6.7625920 13.5871023 10.0109387 10.1234449 12.2021415 11.0871080 -0.1523237 6.0375338 9.8134926 10.1979110 9.3435635 TCGA-EW-A2FS 41 0 NA 1604 breast stage iib t2 n1mi mx female 2008 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 1 2 5 2 1 1 1 4 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 3.467973e-07 20 20 4 24 32 10.2210414 9.1261082 10.7902316 7.2965648 10.2481246 9.7621699 9.8453505 10.5473550 9.9129404 14.2083526 11.2045893 10.4543408 2.5686402 13.0190181 2.8165792 8.4125656 6.8118191 9.4133502 9.7448177 12.7743614 -1.4312869 14.1973178 3.0280740 9.7164855 11.2102447 8.0260254 2.1536108 12.0287816 9.0694863 2.3760125 7.7435702 6.8022643 NA 5.8447698 9.1879473 9.6817354 9.3679260 9.7190265 9.8534686 10.5027038 3.9609657 11.1608679 14.2336472 7.5042223 9.9045931 10.8689971 10.7640167 5.1685578 6.0604971 8.9118303 9.8837940 -1.4312869 10.4623252 4.8354289 6.3368297 3.8165690 10.1554843 12.3234276 10.5173767 11.5295514 13.4638411 8.1629693 10.8040604 10.3389037 10.7199782 10.4409346 3.6979295 11.5328048 11.0771821 -0.4312869 10.4837769 8.6184931 4.1572054 4.2410698 10.3844281 10.3739853 11.1909251 9.6849884 1.8905634 6.5111596 12.0163735 11.8168686 9.4573877 10.0892631 0.350390 0.350390 0.092895 0.235500 0.145180 -0.091420 0.000000 0.000000 0.040326 0.040326 0.040326 0.110670 -0.473320 0.090430 2.635400 -0.477540 0.057966 0.057966 -0.191990 0.114620 -0.102240 0.163700 0.163700 1.366600 -0.215280 -0.215280 -0.215280 0.146070 -0.083465 -0.083465 0.071966 -0.387500 0.145180 0.145180 -0.091420 -0.091420 0.000000 0.000000 0.000000 0.048120 0.048120 -0.490470 -0.156430 -0.156430 -0.156430 -0.152850 -0.473320 -0.473690 0.090430 0.065226 -0.481340 -0.481340 0.057966 0.057966 0.097252 -0.191990 -0.477540 -0.477540 -0.102240 -0.274610 -0.473420 0.163700 -0.081472 -0.215280 -0.215280 0.067232 -1.087400 -0.082137 -0.458960 0.111 0.000 0.000 -0.481 0.000 0.000 -0.192 0.115 -0.102 0.053 -0.275 0.145 0.619 0.000 0.000 -0.215 -0.215 0.000 0.350 0.146 0.146 -0.457 0.000 0.000 0.000 -0.387 0.143 0.145 0.145 0.000 0.000 0.000 0.000 0.000 0.000 -0.490 0.000 -0.156 -0.156 0.000 0.000 0.111 0.000 0.000 -0.481 0.000 0.000 -0.192 0.115 -0.102 0.053 -0.275 0.145 0.619 0.000 0.000 -0.215 -0.215 0.000 0.350 0.146 0.146 -0.457 0.000 0.000 0.000 -0.387 0.143 0.145 0.145 0.000 0.000 0.000 0.000 0.000 0.000 -0.490 0.000 -0.156 -0.156 0.000 0.000 9.6686498 -1.4312869 7.2339801 10.0529639 11.4807854 7.6558419 9.7454409 8.3314750 9.9519006 0.5686159 11.9175109 12.1765169 5.2124993 0.1535460 5.6979267 7.5516383 4.7183890 10.7278852 11.0001421 11.0826188 9.6096191 2.6561073 8.4664901 9.9801554 7.5516383 4.7385679 4.6130365 -1.4312869 10.0659974 5.5573304 8.2516391 8.3168372 6.7335509 11.6890557 9.6660182 2.9609565 8.3840278 NA 7.4755348 12.0858217 10.1943533 8.6293406 -1.4312869 6.9949089 8.7780978 -1.4312869 5.7683167 2.6561073 6.6719316 7.3346764 3.0280740 10.1975456 2.8165792 9.0413353 10.8511538 9.5544864 6.1980010 9.6882340 12.0564845 8.0922064 4.2410698 3.3235286 11.7435702 0.5686159 NA 2.2690930 2.7385733 14.792691 6.262131 9.497903 13.019018 10.556974 10.434378 12.774361 13.012106 8.100396 9.919584 13.170415 11.285678 8.911830 9.030124 1.153611 8.294863 12.225516 10.874706 11.551994 6.748554 12.561219 8.999076 6.618493 9.454341 8.333516 10.133018 6.557329 8.681084 11.204589 8.269084 4.350002 10.172271 9.265612 8.612437 9.562998 10.216103 10.255145 7.044378 9.984386 8.208889 7.511159 14.827647 9.367926 10.096121 10.127065 12.316837 8.691472 10.395987 10.124672 7.052460 2.738573 8.833603 7.114034 9.883794 8.962035 10.462325 3.568640 11.205804 10.155484 7.599312 13.859527 10.435537 10.537671 11.446695 10.560166 4.738568 3.269078 10.684338 8.223281 10.064000 TCGA-EW-A2FV 39 0 NA 788 breast stage iiic t3 n3a mx female 2011 NA yes other, specify 29 white hispanic or latino NA NA 4 3 1 2 3 4 1 2 6 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 1.040392e-07 33.3333333333333 11.1111111111111 0 33.3333333333333 22.2222222222222 10.3654415 9.7803232 11.8889222 9.2728717 8.2775115 8.9431214 9.9846553 10.6355154 10.0527457 14.4027804 10.7671864 11.1974026 -0.2276920 12.5314869 3.0942867 9.7462982 5.1181354 8.7873120 10.5016991 12.7881832 NA 13.5160390 7.6651575 9.3204770 10.8027988 6.6832543 1.1873877 9.2507942 11.4515485 3.3968582 7.2453911 7.2695484 1.3573268 5.7798559 9.9658870 10.5433007 9.5840040 10.0577638 9.9493658 10.8738996 4.6136613 9.2688825 14.4160675 8.0080089 9.4258038 11.0153372 10.7180493 4.1646817 4.8021105 9.3205413 11.6149738 -1.8124856 10.9474953 9.3623248 6.5002826 5.1986277 10.7204854 11.8026839 10.1025315 11.8324946 12.8779973 7.3396844 10.9917318 10.3805641 11.6194189 11.4247585 4.2317933 11.5748780 9.1114693 0.9947245 10.1470389 9.1313791 3.1420539 5.7342923 11.0639160 10.0627645 10.1415954 10.3153935 3.4727997 6.8982059 12.5993072 12.6088065 9.3876848 8.8465030 0.418550 0.412190 0.035164 0.012800 0.110590 -0.145350 0.151060 0.030936 -0.434260 -0.434260 1.584400 0.151210 -0.126160 -0.093475 -0.093475 -0.093475 -0.136070 0.161220 0.118800 0.707470 -0.127010 -0.395030 -0.369240 3.656900 -0.072347 -0.072347 -0.054899 3.656900 -0.116200 -0.116200 -0.133880 0.035164 0.110590 0.110590 -0.145350 -0.145350 0.151060 0.030936 0.030936 0.053301 -0.444690 -0.434260 -0.173930 -0.173930 -0.173930 -0.132840 -0.126160 -0.126160 -0.093475 -0.093475 -0.093475 0.150610 -0.136070 0.161220 0.161220 0.118800 -0.113980 -0.113980 -0.125320 -0.099149 -0.395030 -0.369240 -0.184650 -0.072347 -0.054899 -0.107560 0.108980 -0.391690 -0.391690 0.025 -0.126 0.000 0.000 0.161 0.161 0.119 -0.114 -0.127 0.000 0.000 -0.327 0.000 -0.185 -0.185 0.000 0.000 0.419 0.419 0.000 0.000 0.109 -0.392 -0.134 -0.134 0.000 0.000 0.111 0.111 -0.145 -0.145 0.120 0.000 0.000 0.000 -0.434 -0.434 -0.174 -0.174 0.000 0.000 0.025 -0.126 0.000 0.000 0.161 0.161 0.119 -0.114 -0.127 0.000 0.000 -0.327 0.000 -0.185 -0.185 0.000 0.000 0.419 0.419 0.000 0.000 0.109 -0.392 -0.134 -0.134 0.000 0.000 0.111 0.111 -0.145 -0.145 0.120 0.000 0.000 0.000 -0.434 -0.434 -0.174 -0.174 0.000 0.000 8.4162178 NA 5.6631311 10.3263108 14.0060062 6.4156894 10.5978504 9.7466519 9.1375248 5.0822172 11.9043257 11.2123327 4.0202888 -0.8124856 2.6468308 7.5646099 3.6468308 11.2177213 11.7443841 10.7570174 8.8973445 1.7723502 8.6105152 10.1549857 7.5904111 4.9016441 5.5272487 NA 11.0015810 8.2722075 7.2507939 7.5732617 7.9539281 9.9317452 10.1397763 3.9153201 8.2854313 -0.8124856 7.6406701 12.0724281 7.3772235 7.3371464 -0.8124856 5.7187808 7.7089997 -0.2276920 4.2317933 -1.8124856 6.4728013 3.7150367 3.1874035 10.8192582 2.0943036 9.4144134 10.7170737 10.2294005 6.1002881 9.6857497 14.3418217 9.0407086 5.1415963 3.6468308 12.0896800 1.1873877 NA 0.1873877 1.7723502 13.060342 6.362324 8.315393 12.531487 10.441247 10.886755 12.788183 11.640927 8.774895 10.643497 13.421505 10.799576 9.320541 8.830353 1.887837 8.938943 13.948535 10.7517868 12.6647147 5.5272487 13.0933487 8.8973445 7.4281901 7.5689419 7.9882990 10.3343050 6.6303429 10.0761423 10.7671864 5.6136642 4.1873956 10.4299777 6.6951935 8.1745353 10.9235896 10.4623595 10.6386102 8.5613517 10.4638143 11.1381373 6.3919704 12.5047156 9.5840040 10.3682407 9.6447799 11.4440501 10.2854312 9.1767935 10.3931923 9.4168188 NA 9.4272959 7.6687141 11.6149738 7.6427261 10.9474953 5.9355918 10.8382265 10.7204854 7.6244855 13.4734875 10.7321221 10.4189203 11.7386267 10.4474365 3.4727997 -0.8124856 10.2955968 10.2283737 9.5973204 TCGA-EW-A2FW 52 0 NA 672 breast stage iia t2 n0 (i-) mx female 2011 NA yes other, specify 0 white hispanic or latino NA NA 1 1 2 2 1 1 1 4 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.201959e-07 6.935946e-08 25 25 0 25 25 9.8413756 9.4688213 11.1882534 8.3861811 8.9577080 7.9182998 10.0075891 10.4861446 9.7619743 14.3364117 12.2664012 11.2828720 -1.4258500 13.0248283 2.3813664 8.6786026 7.7687606 8.3570021 11.1999408 13.4658823 1.3813388 15.1361865 -0.4260439 10.3288912 11.3044738 5.9315554 1.3813388 8.4673052 10.6139508 -0.4260439 8.2552420 7.7439289 NA 3.5740046 9.5179837 9.9796770 10.0718556 9.3537231 9.5775215 10.0262450 15.1769635 11.4703361 14.5023138 9.2367433 8.7476808 11.3384606 11.0172062 3.0334406 6.1131629 8.2916800 10.2740098 0.8959230 10.2886785 4.1589671 4.4319839 4.7834567 10.9849850 11.9885568 10.5036320 11.8710632 12.0503702 8.5963717 10.6118938 10.5937160 10.8272603 10.3334758 4.4068904 11.5822572 12.7768162 -1.4258500 9.9636351 8.7501767 2.8249715 4.5282025 10.8541945 10.3989624 10.5873264 8.9138537 2.0334406 4.5512822 10.4797667 10.0497371 10.4323733 8.6786026 0.76734000 0.79568000 0.00110930 0.02454800 0.02749700 0.01740400 -0.00675210 -0.86066000 0.00861350 0.00861350 0.00861350 0.00027728 0.00027728 -0.01092200 3.65690000 1.41810000 0.01712400 0.01712400 0.00750000 0.02876300 -0.01395300 -0.03313200 -0.03313200 -0.03313200 -0.07361000 -0.07361000 -0.07361000 3.65690000 -0.92461000 -0.83930000 -0.55987000 -0.00430800 0.02749700 0.02749700 0.01740400 0.01740400 -0.00675210 -0.86066000 0.02679500 0.02988800 -0.88248000 0.00861350 -0.00995650 -0.00995650 -0.00995650 -0.00995650 0.00027728 -0.02209400 -0.01092200 -0.01092200 -0.86531000 3.65690000 0.01712400 -0.01311800 -0.03212000 -0.00822040 0.00138680 0.00138680 -0.01395300 -0.03476800 -0.03313200 -0.03313200 0.00000000 -0.07361000 -0.07361000 -0.05630700 -0.01202400 -0.04395100 -0.06786000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.865 0.000 -0.904 -0.112 0.000 0.000 -0.560 -0.560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.865 0.000 -0.904 -0.112 0.000 0.000 -0.560 -0.560 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6746661 NA 5.5963717 10.6063938 12.0066760 7.2622537 11.4041227 8.3807468 9.2048169 3.6184031 10.9400526 10.1009088 3.2744406 -1.4258500 2.3813664 7.9981701 3.1589671 8.8777844 11.4106459 11.5850562 10.0081106 NA 7.7834573 10.3234542 6.5796282 4.8407905 1.3813388 NA 10.0668582 5.1887135 5.1887135 8.0190185 7.2499610 11.0627878 10.7641370 2.2744406 9.5172511 NA 6.6981254 12.5061261 8.1664609 8.5908120 NA 1.5740046 8.3909875 NA 3.5740046 -1.4258500 3.8959327 4.5512822 -0.4260439 10.4965881 NA 7.9315554 10.4775090 10.2530439 4.0002705 9.3104056 10.8022211 7.3781344 3.2744406 4.5282025 12.7938528 4.1285904 NA 3.7032890 3.7032890 17.436556 6.097567 8.486893 13.024828 10.136723 11.512848 13.465882 12.868409 10.703206 10.206090 12.227297 9.489883 8.291680 9.014873 4.480892 7.582433 13.405014 10.6779471 12.3737912 8.0313847 13.0865584 7.7687606 4.5963687 9.1533197 10.3328390 10.3773316 5.3019241 10.0138346 12.2664012 6.2250551 -0.4260439 9.4710927 7.5852307 9.6057256 9.7785748 9.7974021 11.3789414 10.2277444 9.9310057 8.2899658 3.1589671 12.3483347 10.0718556 10.2317687 10.4917487 11.7974021 9.5433901 10.2938203 10.6594761 8.0738497 NA 8.8399350 5.9634834 10.2740098 3.8219347 10.2886785 5.9138540 10.6464713 10.9849850 6.5106423 12.8242281 10.0827888 9.6129227 12.0749700 10.0028873 NA NA 10.1009918 9.6720358 9.5289270 TCGA-EW-A3E8 60 0 NA 1035 breast stage iib t3 n0 mx female 2011 NA yes infiltrating lobular carcinoma 0 white hispanic or latino NA NA 3 2 NA NA 6 4 3 3 2 2 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.219503e-06 6.589149e-07 22.6190476190476 59.5238095238095 2.38095238095238 10.7142857142857 4.76190476190476 10.079481 8.798404 11.395370 7.996532 8.786455 8.932075 10.487533 9.303057 10.637832 12.595259 11.639877 10.078351 1.983714 13.674298 3.385804 9.854072 7.237048 8.653099 10.645740 12.246977 2.263816 13.277384 2.983714 9.398966 10.148973 8.423093 NA 10.186881 8.575096 1.346305 8.870711 6.077219 NA 4.761317 9.773474 9.760845 9.175648 11.658026 9.128366 10.592622 9.181977 10.814336 14.637896 7.776693 11.752601 10.777659 10.618000 4.805710 3.130552 7.964255 10.435507 1.635801 10.300474 5.911061 7.092232 4.551393 9.928315 11.884682 10.543767 11.626662 12.762430 8.083243 10.363705 10.307566 10.441088 10.293671 4.107094 11.503484 11.971276 NA 10.761080 8.549217 3.668845 5.610981 10.095216 9.927897 10.537748 9.056701 3.602623 6.699914 12.851593 12.504466 10.068136 9.565984 0.0045800 0.0174040 -0.0679930 0.0440070 0.0175440 0.0234260 0.0227250 -0.4601400 0.0421660 0.0421660 0.0421660 0.0242680 0.0253900 -0.0718730 -0.0718730 -0.0718730 -0.0561730 -0.0591350 -0.0142280 0.0223040 -0.1645900 0.0197830 0.0197830 0.0197830 0.0000000 0.0000000 0.0000000 0.0153080 -0.0060904 0.0045800 -0.0733430 -0.4527600 0.0175440 0.0011093 0.0234260 0.0234260 0.0227250 -0.4601400 -0.4601400 -0.0414310 -0.0758010 0.0421660 0.0162860 0.0162860 -0.4414500 0.0087133 0.0253900 0.0273570 -0.0718730 -0.0718730 -0.0718730 -0.0714720 -0.0591350 -0.0591350 -0.0575200 -0.0110600 0.0223040 0.0223040 -0.1645900 -0.4938100 -0.4743800 0.0197830 0.0085793 0.0000000 0.0000000 0.0153080 -0.0502350 -0.0087689 -0.0044312 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 0.203 -0.261 -0.474 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 0.000 0.000 0.000 0.000 -0.456 -0.456 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 0.203 -0.261 -0.474 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.460 0.000 0.000 0.000 0.000 -0.456 -0.456 0.000 0.000 8.7462083 6.5426744 5.5513930 11.6195551 11.2025301 8.0476262 11.2775075 8.9785537 9.9320121 3.6357892 11.8119573 11.2044520 3.6026232 7.1507668 3.8487782 7.4640646 3.6682099 11.6321935 11.0789161 9.9573023 9.3717248 3.9577103 8.4617549 10.8181785 8.1464582 10.0131919 NA NA 10.4764191 6.6841469 6.4617545 7.9278965 7.1650376 11.6359673 9.2894435 3.9837051 9.6156640 -1.8236772 7.7155111 12.4777058 10.1221621 8.6571426 -0.8236772 2.0832474 8.0202738 NA 4.8767920 4.4801358 7.3537723 5.8703277 4.8345646 10.2936710 0.9836777 7.5920944 10.3970331 9.3790885 6.5470395 10.2578360 13.4769553 8.6520860 4.4617577 5.2743847 11.5469037 1.1763228 NA -1.8236772 1.1763228 13.431616 5.699915 8.635784 13.674298 10.399147 9.865477 12.246977 11.130185 9.269440 10.110043 12.872614 10.421608 7.964255 8.478992 1.346305 7.271750 10.009243 10.9040603 12.6113716 7.0218428 13.2491090 8.6047126 7.5686698 8.7901419 7.9666197 10.0603208 8.6510725 8.0358872 11.6398769 7.8646028 0.7612853 10.7278205 7.2451305 7.4559165 10.9628264 10.1731790 10.5418548 7.8854365 9.7641300 10.6373203 7.4709736 12.9967644 9.1756478 10.8606629 10.1597025 10.0432451 9.8884495 10.0444034 10.3689536 7.9933364 NA 9.6703730 7.7710503 10.4355073 8.3784765 10.3004738 6.1305479 11.3165432 9.9283149 7.0092430 13.9242043 10.3289542 10.4501482 12.4740569 11.4141600 7.1931606 2.5931864 9.7385949 9.5878636 9.3930985 TCGA-EW-A3U0 61 0 NA 532 breast stage iiia t3 n1a m0 female 2011 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 3 6 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 3.121176e-06 1.040392e-06 4.95867768595041 23.9669421487603 3.30578512396694 39.6694214876033 28.099173553719 10.174039 9.539576 11.600316 9.078675 8.729282 9.278575 8.157301 10.188589 10.541531 11.913171 10.982618 10.119572 -1.308287 11.725330 1.276675 10.372534 6.199529 8.784493 10.933421 8.670446 NA 8.234767 7.598626 10.646644 10.206449 9.224091 5.167470 12.059696 11.741243 3.779197 8.994374 7.328360 4.939664 6.663279 10.258265 10.027126 9.393042 9.890180 11.153982 10.331980 2.013677 10.426021 15.407724 7.950561 10.065144 11.132085 10.425598 4.335590 -1.308287 9.694550 10.517489 -1.308287 10.205956 6.752431 7.854127 6.392175 8.826162 12.081904 9.862912 11.970330 12.711673 6.473095 10.957643 10.443350 10.713756 10.734763 4.215298 11.606868 9.019288 1.276675 11.420506 8.906054 6.317664 5.967860 10.118000 10.057511 10.859153 8.981754 2.499093 5.562099 13.029287 12.306445 9.873509 10.435307 0.3682100 -0.1682800 0.3629700 0.6898000 -0.3869400 0.2470000 0.9880400 1.8238000 -0.3829100 -0.3829100 0.5572600 0.3845200 0.0216030 1.1231000 0.0788710 0.0788710 0.2932600 -0.3847000 0.4940700 0.3898200 1.2603000 -0.0085766 0.0022003 0.7661900 -0.1750000 -0.1750000 -0.3747100 0.4151300 -0.3858200 -0.2797700 -0.1349700 -0.3883900 -0.4051700 -0.3807800 0.1102300 0.0095883 0.9880400 0.4415500 -0.2326400 -0.0135400 -0.3984200 -0.3973000 0.4444300 0.0045800 -0.1919900 -0.2309200 0.0216030 -0.2331300 -0.4084900 0.0788710 0.0469840 -0.3832500 0.0123760 -0.3847000 0.5103700 -0.3811200 0.0926050 -0.2579300 -0.3847000 0.2103900 -0.0085766 0.0022003 0.3812200 -0.1887300 -0.1750000 -0.0310860 0.0070826 0.0362290 -0.3977500 0.000 0.000 0.344 0.344 -0.321 -0.321 -0.381 -0.304 0.000 -0.373 -0.373 0.000 0.000 0.261 0.261 -0.175 -0.175 0.000 0.000 -0.106 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 -0.385 0.000 0.000 0.000 0.000 0.000 0.000 -0.383 -0.383 0.000 -0.213 0.000 0.000 0.000 0.000 0.344 0.344 -0.321 -0.321 -0.381 -0.304 0.000 -0.373 -0.373 0.000 0.000 0.261 0.261 -0.175 -0.175 0.000 0.000 -0.106 -0.106 0.000 0.000 0.000 0.000 0.000 0.000 -0.385 -0.385 0.000 0.000 0.000 0.000 0.000 0.000 -0.383 -0.383 0.000 -0.213 0.000 0.000 8.1694936 NA 7.8790876 11.1524471 11.0583307 6.1029919 10.0232121 9.7819932 9.1484181 2.9396591 13.3207503 12.0732769 4.1180025 2.9396591 5.2916478 9.0861981 4.5246279 12.0399101 11.2076814 10.3592903 8.5119143 1.2766753 7.9538304 10.6765097 9.4298275 9.8944713 1.0136409 1.4990677 11.4656986 6.3990942 6.5497169 8.6775773 10.4775964 11.2610189 10.5800980 4.8616626 10.5489387 0.6917128 8.2074351 13.0576476 9.3156167 8.1326046 0.2766753 5.5497154 8.1955612 -0.3082872 3.9771334 0.2766753 8.3834788 3.4466268 5.8002606 10.1629024 6.9109041 9.6567979 10.9307370 9.3073650 7.8790876 11.1717681 13.5285253 11.3082841 7.0226519 5.5119139 10.5162963 -1.3082872 -1.3082872 NA 6.4861512 10.456802 7.515102 8.340991 11.725330 10.312413 10.572849 8.670446 12.694374 9.422078 10.852867 13.224943 13.052034 9.694550 7.565179 4.598627 8.315617 10.690326 10.945583 12.390874 6.142946 13.491622 8.704360 8.419656 10.380423 8.335591 9.593869 9.375607 8.161377 10.982618 9.809378 2.013677 10.204476 9.615805 10.014154 10.620624 10.990371 9.802871 7.601628 8.543484 9.919351 9.233800 11.575188 9.393042 10.528180 10.617660 11.339419 11.349054 10.656437 10.531333 7.993232 NA 9.892983 7.486151 10.517489 10.353958 10.205956 6.861660 11.041569 8.826162 7.476370 13.584752 9.732025 10.557082 12.908936 11.583519 8.155259 3.392180 10.058057 9.274818 9.312871 TCGA-EW-A423 75 0 NA 533 breast stage iia t2 n0 mx female 2012 NA yes infiltrating lobular carcinoma 0 white hispanic or latino NA NA 4 2 5 3 1 2 3 2 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.144431e-06 6.589149e-07 26.9230769230769 32.6923076923077 1.92307692307692 25 13.4615384615385 9.0429819 9.0732244 10.5516553 5.9024185 9.3142325 8.3488206 10.4468525 9.4959433 10.1951197 12.7990340 11.1291221 9.8979531 1.3946239 13.3603634 2.7165520 8.8894799 7.3804663 8.1644620 9.4913394 12.9735865 1.3946239 14.0913201 4.1759876 10.7286293 10.5418291 3.4390247 -1.6051566 9.5356329 9.1939058 0.7165959 7.5893807 5.2401158 -1.6051566 3.3488273 8.8354934 9.2954909 9.2163981 10.6195303 9.9996407 10.7532754 3.0950636 11.8518768 14.0080971 8.1707773 11.4105619 9.9630554 10.4482107 4.6040773 8.4016514 7.6472893 10.7777885 NA 10.1071512 4.0670535 5.8208886 3.6040832 10.3833089 11.6945477 11.0038029 10.7941691 11.6915404 8.5507072 9.9410365 9.6455147 10.0443295 10.0102538 2.8540555 10.6348192 10.3998978 1.7165520 10.4847366 8.2084056 5.1228176 5.0670492 10.3995469 9.8652831 10.4929854 9.0776187 1.3946239 9.4985676 12.0869128 11.1367230 10.0483649 10.4124765 1.2793000 1.2515000 -0.4673800 -0.0243880 -0.0661180 0.3991100 0.4056100 0.3870000 0.0038289 0.0038289 0.0141900 0.2720600 0.2720600 0.4139600 3.6569000 -0.5267500 -0.0549600 -0.0642400 0.4410500 -0.5167100 -0.0324500 0.3221800 0.3221800 0.3221800 0.3654300 0.3654300 0.3654300 0.4368200 -0.4894200 0.4007700 -0.4565100 -0.4687600 -0.0461770 -0.0683950 0.3959500 0.3959500 0.4056100 0.3870000 0.4002800 0.3873300 0.3873300 0.0038289 -0.5079300 -0.5079300 -0.5079300 -0.4929800 0.2720600 0.2720600 0.4019400 -0.5116600 -0.5063900 -0.5063900 -0.0549600 -0.5001700 -0.0195890 0.3800600 -0.5098100 -0.5098100 -0.5048400 -0.4946500 -0.5102200 0.3221800 -0.4973600 -0.5454200 0.3654300 0.3977800 0.4116200 -0.4860700 -0.4867000 0.272 0.272 0.414 -0.461 0.000 0.000 0.380 -0.510 0.000 -0.056 -0.467 0.000 0.322 -0.497 -0.497 0.365 0.365 0.401 1.251 -0.144 0.228 0.412 -0.495 -0.467 -0.467 -0.455 0.000 0.000 0.000 0.390 0.390 0.406 0.406 0.387 0.387 0.000 0.000 -0.508 -0.508 0.000 0.000 0.272 0.272 0.414 -0.461 0.000 0.000 0.380 -0.510 0.000 -0.056 -0.467 0.000 0.322 -0.497 -0.497 0.365 0.365 0.401 1.251 -0.144 0.228 0.412 -0.495 -0.467 -0.467 -0.455 0.000 0.000 0.000 0.390 0.390 0.406 0.406 0.387 0.387 0.000 0.000 -0.508 -0.508 0.000 0.000 9.0626228 8.1644620 5.7521759 11.9954663 11.4979120 8.7579266 12.0226140 6.9131204 10.2999886 -1.6051566 11.5261597 11.9682903 4.3719073 1.5645733 3.9181858 7.8018920 4.5645489 9.6966918 11.0072624 10.7269405 9.0420826 7.2742076 8.4687658 11.5965949 6.6137924 3.6040832 -1.6051566 -1.6051566 10.7612196 6.5645489 4.8208886 7.2275139 9.0758626 11.9529851 10.4294232 4.5645489 9.9366887 NA 6.5083668 11.6220897 9.3097567 9.1276395 1.3946239 5.0528375 8.5431007 3.8208937 4.2275178 1.5645733 4.9337851 7.3862307 2.4820996 10.6318341 1.3946239 6.6377986 10.7535501 8.9093384 4.4390180 10.4777711 11.1565909 7.7976362 4.5031515 3.9492174 9.7305727 2.7165520 NA 2.0950805 0.7165959 14.411896 6.337138 8.564549 13.360363 10.479765 11.080468 12.973586 11.798169 8.214133 9.249493 12.342170 8.230675 7.647289 9.365449 3.439025 7.510968 11.479765 10.4853982 12.4068122 6.4169917 13.9029436 9.0950639 5.8208886 8.4820871 8.4390184 10.0852638 8.2954912 5.6234426 11.1291221 6.6377986 0.3946239 9.6631662 7.6330286 8.0237255 8.1857873 10.0289815 10.6724927 6.8984502 10.3404338 8.6150024 4.2019788 12.1078474 9.2163981 10.1092990 10.6225409 10.8809564 9.5011871 10.3981421 10.4478713 6.3134871 -1.6051566 9.9041320 5.3253612 10.7777885 3.6040832 10.1071512 3.3015145 10.8791954 10.3833089 7.1019830 14.3717248 9.8668072 9.7411380 11.7192267 10.9540013 0.7165959 -1.6051566 10.0780575 8.5607872 9.3697557 TCGA-EW-A424 51 0 NA 715 breast stage iiia t3 n1 mx female 2012 NA yes infiltrating lobular carcinoma 0 white hispanic or latino NA NA 1 2 4 3 4 4 3 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.4740606 8.7802399 10.7146455 7.5092263 9.1989371 8.7409734 9.4952630 9.7011609 10.8886126 11.4091946 11.4396740 10.1958008 4.0243019 12.7633907 3.1067671 9.7880708 7.2707429 8.3880535 9.5035306 12.7309196 1.9368546 14.0186033 4.8910400 10.3335077 10.6430504 3.1067671 -0.6481456 8.8685645 7.8832610 0.3518544 9.0941891 7.0523192 NA 4.6917296 9.2237850 9.5619422 9.7083318 11.4071622 9.5398503 10.3550462 7.3546946 11.6806949 14.4094485 6.4993389 10.3742476 10.7135494 10.5104894 5.7865075 6.2826177 7.5392317 10.9773603 -0.6481456 10.3345169 4.4604018 4.3518827 3.9665874 9.6972851 12.0664473 11.0141031 11.4041081 12.4129133 9.2640205 10.8542143 10.6539475 10.9529541 9.9975381 3.5613384 11.4738988 11.8664705 -1.6479195 10.3652024 8.5454051 4.8279359 2.7442042 11.3291597 10.0536194 10.4821285 8.8265996 3.4393439 9.3111573 12.7504899 13.4236773 9.9236323 9.5003563 0.6427600 0.6485400 0.0090312 -0.0058583 -0.0160170 0.0087528 0.0283410 -0.0234290 -0.6397200 -0.6397200 0.0069435 0.0294660 0.0294660 0.0325630 0.0325630 0.0325630 0.0065135 0.0065135 0.0133530 -0.6431100 0.0642250 0.0639250 0.0639250 0.0639250 0.0930400 0.0853650 0.0853650 0.0748660 -0.5978900 0.0041632 0.0000000 -0.0058583 0.0788710 -0.0231550 -0.0031859 -0.0031859 0.0239870 -0.0234290 -0.6742600 -0.0002591 0.0570830 -0.6545400 -0.1115500 -0.1014500 -0.1014500 -0.1014500 0.0294660 0.0484040 0.0558000 0.0325630 -0.6533400 -0.6370800 0.0065135 0.0115270 0.0689520 -0.0143240 -0.6431100 -0.6431100 -0.6271300 -0.6195900 0.0639250 0.0639250 0.0639390 0.0930400 0.0853650 0.0759910 0.0049969 -0.5954600 0.1290400 0.000 0.000 0.000 -0.637 0.000 0.000 0.000 -0.643 0.000 0.000 -0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.636 -0.636 -0.101 -0.101 0.000 0.000 0.000 0.000 0.000 -0.637 0.000 0.000 0.000 -0.643 0.000 0.000 -0.620 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.639 0.000 0.000 0.000 0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.636 -0.636 -0.101 -0.101 0.000 0.000 8.7875500 2.7442042 6.3002464 11.6236345 11.3113384 7.7743858 11.2761355 7.1984981 9.2430254 1.3518544 11.9389540 11.1910599 2.8754459 3.2587752 3.1592417 8.2692520 3.3518827 9.3742475 11.2306970 10.5524719 9.7500891 9.5974325 8.6198366 10.6012895 5.3742466 5.0523202 -1.6479195 -0.6481456 10.1664623 7.0313599 6.3462336 7.4206584 6.8949111 12.0028428 10.2561380 3.6372856 9.6788709 -1.6479195 8.1200642 12.2344273 10.4013880 7.5588944 NA 3.5998058 8.2617729 NA 4.7269184 1.5218046 2.3518827 5.1598794 2.3518827 11.0652663 2.2587601 7.7548915 10.7838996 9.7372029 5.2587714 9.2722325 11.0328985 7.2436634 3.7781455 2.2587601 10.7252887 0.6738278 NA -0.0631077 2.3518827 12.237751 6.100074 8.637282 12.763391 10.324142 10.899497 12.730920 11.197958 9.367100 10.181603 12.545636 11.482450 7.539232 8.924580 3.052312 7.501627 10.596244 10.8334270 11.3568024 6.9103009 13.9226237 8.4419922 5.0933447 9.3075296 7.9647481 9.9957178 6.1462947 5.7697321 11.4396740 8.9471372 4.0523202 9.4869476 8.4446368 6.3322478 11.0187694 9.8220301 9.8856961 7.0207644 9.9665895 9.3455259 5.5218046 13.1343661 9.7083318 10.1926576 10.3721652 9.8148931 9.7891117 9.9559696 10.3280858 7.1560113 NA 8.7152918 6.2837996 10.9773603 6.1720594 10.3345169 5.8030901 10.9663595 9.6972851 6.4182912 14.5836259 9.5884920 9.9278916 12.2392908 11.6613561 -0.0631077 -1.6479195 10.1096864 8.3046210 9.8447343 TCGA-EW-A6S9 34 0 NA 463 breast stage iia t1c n1 m0 female 2013 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 1 1 1 2 2 1 8 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.9745845 9.1763854 12.2214439 9.5746387 9.1571875 9.2687198 10.3709957 9.8323576 9.9135415 13.6099715 11.4914316 10.6086029 2.0726203 17.0502299 2.6131780 10.1567043 7.1130347 8.3325777 7.3308658 12.9689531 -1.3868456 13.3235112 4.6575828 9.3086958 10.7536993 8.1504074 3.1981484 8.4429120 10.1615294 2.3136232 8.9860542 6.9123972 -0.3868456 5.0225809 10.2379845 10.4916232 9.3214109 9.8335674 9.7262800 11.5300016 0.1981169 9.2642408 15.1168285 8.4351860 10.0156682 10.6640580 10.6916735 4.3945484 4.1677754 9.0268169 10.3058046 -1.3868456 11.0278743 5.0726203 4.9530370 5.2570446 9.5782517 11.6620165 10.4578949 12.6290396 12.5115070 6.9925679 11.0797754 10.5821617 11.1482214 11.0959970 5.0889218 11.7994581 13.5614650 -1.3868456 10.7689560 8.8492033 3.3707502 5.3546567 9.8962775 9.4664987 10.7145082 9.5883206 2.0726203 7.2642408 13.5024553 11.6216177 9.9480210 9.9630232 0.0534740 0.1475600 -0.1627400 -0.0914200 0.0189430 0.0532370 0.1027800 3.6569000 0.0944910 0.0944910 0.0944910 -0.1930000 -0.1930000 -0.1741100 -0.0062286 -0.0062286 -0.0540160 -0.0540160 -0.5312400 0.0754150 0.0000000 -0.6313100 3.6569000 0.1616000 -0.5036000 0.6335300 -0.0047079 0.0738730 0.0534740 0.0534740 -0.1706900 -0.1627400 0.0189430 0.0214630 -0.6095000 -0.6519300 0.1027800 -0.6051600 0.0346770 0.0711040 0.0583670 0.0944910 -0.0790770 -0.7366100 -0.0530710 -0.0530710 -0.1930000 -0.1930000 -0.1741100 -0.0062286 -0.0062286 -0.0062286 -0.0540160 -0.0540160 -0.0540160 -0.5312400 0.0622990 0.0666580 0.0000000 -0.4552200 -0.6313100 -0.2900000 0.0535210 -0.5036000 -0.5878400 0.0891270 -0.0682610 -0.5809800 -0.5690200 -0.193 -0.193 -0.168 0.000 0.000 0.000 -0.531 0.000 0.000 0.000 -0.453 -0.631 -0.509 0.000 0.000 -0.499 0.000 0.000 0.000 0.000 0.000 0.000 -0.581 -0.171 -0.171 -0.163 -0.163 0.000 0.000 -0.610 -0.610 -0.502 -0.605 0.000 0.000 0.000 0.000 -0.737 -0.737 0.000 0.000 -0.193 -0.193 -0.168 0.000 0.000 0.000 -0.531 0.000 0.000 0.000 -0.453 -0.631 -0.509 0.000 0.000 -0.499 0.000 0.000 0.000 0.000 0.000 0.000 -0.581 -0.171 -0.171 -0.163 -0.163 0.000 0.000 -0.610 -0.610 -0.502 -0.605 0.000 0.000 0.000 0.000 -0.737 -0.737 0.000 0.000 9.0929693 -1.3868456 6.2856149 11.0373553 11.2384413 7.5706398 11.5979635 8.4838927 7.9868375 -1.3868456 12.1437173 10.9831844 3.7006506 5.1367492 3.9707432 7.2926695 4.5673872 10.3722450 11.6759098 10.3743248 9.1426197 2.0726203 7.9903996 9.9294706 6.5080071 2.9351203 4.3680769 -0.3868456 10.5666580 6.4076043 6.9260718 8.7282328 4.8611167 10.0748578 9.7072668 4.0726203 8.8262933 NA 7.8682176 11.6114269 8.7968245 7.2168157 NA 1.7831213 7.8916385 4.6792774 3.8226384 0.1981169 3.3136232 6.2273098 1.9351203 10.1586362 5.1677794 8.6410951 11.1065442 9.4804677 2.7006617 9.1533172 12.8812193 9.3830268 2.7831213 3.7424698 9.3714123 3.7424698 -1.3868456 -0.3868456 2.0726203 14.206034 6.526078 9.024700 17.050230 9.444496 10.669488 12.968953 11.563927 9.267977 10.674898 13.210951 10.088922 9.026817 9.357182 1.198180 7.549827 11.409837 11.5193280 12.8724174 5.7321308 14.4517504 8.9373697 4.1050411 8.9089579 8.4658435 11.0867122 7.1170145 6.9169698 11.4914316 7.5673857 4.6575828 10.5796945 7.5260782 7.4779946 12.5248619 10.2237526 10.7746359 7.2820737 9.5557036 10.4460791 6.4773746 11.5080485 9.3214109 10.1687368 10.2583971 10.5750005 9.7099042 11.5945779 10.5219569 9.8097911 -0.3868456 10.2880654 6.6684709 10.3058046 7.1445706 11.0278743 7.7295331 10.7282327 9.5782517 7.3879759 13.8491285 10.1811452 10.2718469 12.5779811 10.6414404 -1.3868456 -1.3868456 10.6759099 10.1754315 9.3780607 TCGA-EW-A6SA 59 0 NA 510 breast stage ii t2 n0 (i+) mx male 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 1 2 1 2 1 1 1 1 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.2601575 9.3065088 11.4894193 8.4075525 9.0918749 8.8347371 10.8189589 9.9564624 8.0108604 13.9927622 11.9217959 10.7713309 -0.1028370 12.5939406 3.1701334 7.5952441 5.6067768 8.3929729 10.9779355 13.6435973 0.3122005 15.1246712 NA 9.6887421 11.8101320 5.9703659 0.3122005 6.1195097 10.6433523 -1.6877995 7.0502481 6.7467830 NA 4.1947962 9.2908660 9.4388598 10.0815801 9.3996182 10.3372950 10.7257834 1.3121424 11.8393881 14.1938430 8.7074647 9.6614366 10.6969392 10.1732424 4.2190446 0.3122005 8.3442014 9.8522836 -1.6877995 10.2919379 2.8357220 2.1195222 1.4820738 10.0607677 12.5030604 10.4561764 12.4787893 13.6792289 7.9774912 11.1751802 11.0977408 10.5200849 10.9618607 3.6697071 11.7137017 12.6735510 -1.6877995 10.1489948 9.6947794 2.8413492 1.4820738 11.2608877 10.9938331 11.1951805 10.3735266 1.6340821 6.0195151 10.7723553 9.3275706 10.2008987 9.8801115 -0.328870 0.319360 0.056980 0.039942 0.096711 0.057979 0.038811 0.000000 3.317100 1.250900 1.215900 0.115690 0.074276 -0.197650 1.357100 -0.720100 -0.389030 3.656900 0.323870 0.222680 -0.649370 -0.652090 -0.644690 1.314600 -0.630450 -0.630450 0.402820 0.342950 -0.128720 -0.195090 0.538940 0.056980 0.520180 -0.184550 0.057979 -0.164300 0.038811 0.000000 0.016045 -0.401820 -0.409890 -0.689900 0.280640 0.280640 -0.640750 -0.582420 0.074276 0.084394 -0.201960 -0.082365 -0.720100 -0.731900 -0.414070 -0.412970 -0.412970 0.243310 -0.753720 0.307180 -0.399050 -0.698720 -0.652090 -0.644690 0.291080 0.467120 -0.612270 0.170500 -1.257700 -0.660840 -0.660840 0.000 0.000 -0.146 -0.720 -0.414 -0.414 0.243 0.228 -0.649 1.316 -0.705 0.662 1.315 0.291 0.291 -0.209 -0.209 0.100 0.228 0.171 0.171 0.000 -0.661 -0.205 0.000 0.000 0.000 0.222 -0.201 0.000 -0.164 0.000 0.000 -0.402 -0.402 0.560 1.216 -0.348 -0.628 0.000 0.000 0.000 0.000 -0.146 -0.720 -0.414 -0.414 0.243 0.228 -0.649 1.316 -0.705 0.662 1.315 0.291 0.291 -0.209 -0.209 0.100 0.228 0.171 0.171 0.000 -0.661 -0.205 0.000 0.000 0.000 0.222 -0.201 0.000 -0.164 0.000 0.000 -0.402 -0.402 0.560 1.216 -0.348 -0.628 0.000 0.000 8.0400760 NA 7.4154435 11.7367154 12.4731298 6.6921398 11.1035218 6.7791901 9.6228422 -1.6877995 10.8462151 10.9031541 7.1387039 -0.6877995 4.8820120 8.0670428 4.8513143 7.5142793 11.5474218 10.3521026 9.8337558 4.1701334 8.7436530 10.8352273 7.3065092 2.1195222 4.6697071 NA 10.6039017 6.5313238 7.7715872 6.2894361 4.7551012 12.2884958 9.6464287 0.6341286 9.0603482 NA 5.9046117 11.6182171 9.3462666 8.3660813 NA 7.2220481 8.4933079 4.6340821 3.9560102 -0.1028370 1.1194890 3.7390920 -0.6877995 11.2526526 NA 4.8971194 10.5340446 9.5403730 3.8040122 6.7300081 10.7620779 5.8120001 0.6341286 3.1701334 11.4598374 3.0125866 NA 1.7715898 -1.6877995 15.4884235 6.0670428 9.3022594 12.5939406 10.1191078 9.4082117 13.6435973 12.9051964 7.9176352 10.0246825 12.1849265 10.1986141 8.3442014 8.1418783 0.8970855 8.0160589 13.1168915 10.550560 13.079719 6.106572 14.113608 8.906480 3.067036 9.781288 8.681393 10.259263 3.399622 4.145042 11.921796 7.002153 NA 10.799242 7.906480 7.930853 8.845485 8.494550 10.814739 7.952401 9.520999 8.772611 2.219060 13.574746 10.081580 9.402930 9.666405 14.559378 8.452985 13.371162 9.743653 8.090233 NA 8.602105 5.420681 9.852284 2.399609 10.291938 4.615934 10.571016 10.060768 6.930541 13.704305 10.641391 9.574250 10.619641 11.888404 -1.687800 -0.102837 12.780652 9.676837 9.613080 TCGA-EW-A6SB 62 0 NA 760 breast stage ii t2 n0 m0 female 2012 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 1 2 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.2739065 7.4803572 10.5519515 6.9328702 8.6429521 8.6896741 8.7497055 10.5693084 12.4838335 12.8765266 11.4106798 10.3444350 -0.6743833 11.5660326 2.4954649 9.5923258 6.4340644 8.7890638 9.6144054 6.5734669 NA 9.6687251 6.9908755 9.8859486 10.3360674 6.8253850 1.3255591 11.7697778 10.9873175 0.3255015 9.0207678 5.6293187 NA 8.8953950 8.2081822 10.6063101 8.9890976 8.9067400 8.9711978 10.1694604 1.6474527 8.1101742 13.8147601 6.1416269 10.0120399 9.6463398 8.2294211 2.4954649 -0.6743833 7.1959037 8.7306807 NA 10.9662362 3.7178573 7.5639444 5.3699340 9.8510602 11.8325906 11.1772884 11.2032069 12.1933972 5.2797350 11.0036993 10.7210735 10.7788100 10.1663173 3.0259855 11.6429520 7.4548224 0.9105024 9.4509528 9.6236019 2.3255303 4.7178573 11.8571645 10.0728932 9.8868274 10.0644760 1.6474527 6.4235714 11.6756498 11.4163134 9.5227561 10.3304620 0.36100000 0.55054000 -0.02315500 -0.01078400 -0.18244000 0.00930980 0.00083195 0.01000600 -0.39753000 0.16010000 0.78331000 0.39147000 0.02468900 0.18450000 0.18450000 0.18450000 1.11300000 -0.00373950 0.01000600 -0.17537000 -0.19625000 -0.20535000 -0.20448000 -0.20448000 0.14831000 0.14831000 0.18935000 -0.00332430 -0.20958000 0.36100000 -0.02315500 -0.02315500 -0.42767000 -0.21595000 -0.35442000 -0.35442000 0.00083195 0.01000600 0.00260170 -0.17221000 0.21612000 -0.40534000 -0.22613000 -0.22613000 -0.22613000 -0.22613000 0.02468900 0.02468900 0.18510000 0.18450000 0.18450000 0.18450000 0.95620000 -0.00373950 -0.00373950 0.01000600 -0.17537000 -0.17537000 -0.19625000 0.09638000 -0.20535000 -0.20448000 0.18268000 -0.14532000 0.18935000 -0.00332430 0.41647000 -0.20486000 -0.20486000 0.367 0.000 0.184 0.184 0.956 0.000 0.000 -0.175 -0.196 0.000 0.000 -0.205 -0.205 0.183 0.183 0.148 0.148 0.151 0.151 0.000 0.000 0.000 -0.205 0.000 0.000 0.000 0.000 -0.377 -0.190 0.000 -0.354 0.381 0.000 -0.172 0.044 -0.398 0.194 -0.226 -0.226 -0.184 0.000 0.367 0.000 0.184 0.184 0.956 0.000 0.000 -0.175 -0.196 0.000 0.000 -0.205 -0.205 0.183 0.183 0.148 0.148 0.151 0.151 0.000 0.000 0.000 -0.205 0.000 0.000 0.000 0.000 -0.377 -0.190 0.000 -0.354 0.381 0.000 -0.172 0.044 -0.398 0.194 -0.226 -0.226 -0.184 0.000 8.3451302 NA 2.4954649 11.0585547 11.4866712 6.4049167 10.9057979 8.5270997 9.4559812 NA 12.2773704 11.5901286 3.4129983 NA 0.3255015 8.7264188 5.1328935 10.9388684 11.4746514 10.2547977 9.5190648 0.3255015 9.1199553 11.0445003 8.8934954 1.3255591 -0.6743833 1.9105024 10.6874831 2.6474757 7.6016638 8.7370502 6.9979641 10.2333914 10.0945507 2.4954649 9.9567164 0.9105024 6.1199558 12.3154660 7.5876343 6.9979641 2.6474757 4.2324305 8.8012728 3.1328894 1.3255591 NA 7.9291655 4.0259767 7.7643309 11.9596697 7.4235714 8.5615534 11.6964991 10.5386436 7.9439248 10.6592538 13.6538637 8.9801753 6.6830915 5.7849698 10.5958346 1.6474527 3.8490985 1.9105024 6.5153640 11.905680 8.610941 8.358962 11.566033 10.117516 11.650282 6.573467 8.399681 9.536211 11.600209 13.293396 11.768224 7.195904 8.265119 3.495465 6.825385 9.691862 9.9521610 11.6962267 9.0854276 13.6607196 8.8510600 7.5687131 8.9179965 7.9693957 9.5500114 8.0904110 7.0190258 11.4106798 5.3479066 0.3255015 10.0762463 10.2294213 9.2671739 11.5621515 10.9882077 10.2324299 8.2354322 10.0837625 4.6830901 10.9806228 9.7800238 8.9890976 10.3071066 10.4353700 10.7829203 10.1449201 10.7653702 10.0285777 7.5543578 NA 10.4546163 6.4854107 8.7306807 11.7818938 10.9662362 3.9105024 11.0406434 9.8510602 7.5054488 15.3898190 10.9015512 10.9485063 12.2523913 11.8953950 4.4548207 1.3255591 9.6028267 8.7157084 8.3862354 TCGA-EW-A6SC 60 0 NA 952 breast stage iia t2 n0 m0 female 2012 NA yes infiltrating lobular carcinoma 0 black or african american not hispanic or latino NA NA 3 1 5 3 1 4 1 4 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.3091146 10.0274372 11.6989291 8.9898097 8.1444314 9.3505255 10.4189253 9.9413520 9.8085225 10.0736941 11.6852004 10.4926604 -0.2522259 12.5340962 3.4482667 9.8969386 6.7922203 8.2753037 7.9177516 12.2629104 1.9177373 13.7911103 4.6785621 9.2363094 10.4960195 7.0424474 -0.2522259 11.5102086 9.4352023 NA 8.6815171 7.1444309 NA 4.1053764 9.9271136 11.5834823 9.7908538 11.0265664 9.9975326 11.2811563 8.5027141 12.0140275 14.5736549 8.7176593 10.8135759 11.1374579 11.0590073 5.3176839 3.8352875 9.0798631 11.3746764 NA 10.9654814 6.5291869 6.0424474 5.1907689 10.5336877 12.0421601 10.4508649 11.8412442 12.9769458 8.9621458 10.8085225 10.5790388 11.2952032 11.1225944 5.0146142 11.3882975 11.8800050 -0.2522259 10.5442719 8.8937587 4.0335992 5.8667671 10.0116826 10.1535000 10.1808904 9.0584393 2.0697709 8.1593375 13.4187041 11.6403694 9.9239998 9.8758209 0.0158660 0.6137100 -0.0026322 -0.0026322 -0.0076101 -0.0030475 0.0011093 0.0011093 0.0024969 0.0024969 0.0024969 0.0109650 0.0134920 0.0066653 2.7142000 -0.6316900 -0.6271300 0.0000000 0.0019418 0.0408920 0.0195030 0.0370760 0.0387710 0.0321400 0.0296060 0.0296060 0.0296060 0.0274970 0.0158660 0.0158660 0.0144700 -0.0026322 -0.0076101 -0.0215140 -0.0030475 -0.0030475 0.0011093 0.0011093 -0.0112050 -0.0060751 0.0019418 0.0024969 0.0114000 0.0114000 0.0114000 0.0114000 0.0134920 0.0821880 0.7128300 -0.6261700 -0.6424600 -0.6424600 -0.6371800 0.0000000 0.0000000 -0.0036011 -0.5922400 -0.5922400 0.0195030 -0.6738900 -0.6276000 -0.6217900 0.0105640 0.0296060 0.0296060 0.0274970 0.0136320 -0.6267400 -0.6334500 0.000 0.000 0.000 0.000 -0.627 -0.627 0.000 0.000 0.000 0.710 -0.674 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.627 -0.627 0.000 0.000 0.000 0.710 -0.674 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.633 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6243437 NA 6.7251072 10.9064363 10.9739377 7.4393256 10.7020229 9.1227139 9.0480533 4.6304695 11.7487069 11.0736464 2.7478170 4.4757464 3.5027125 7.7020230 3.7478278 9.7860597 10.8085225 10.7446532 9.3004958 3.3916852 7.8796837 10.1244946 6.5551812 5.8246431 0.7478600 -1.2522259 10.9199415 6.9621453 7.2869855 7.4060383 5.9862312 10.4847823 9.6807795 4.3327867 9.2516524 -1.2522259 6.5680063 11.7843437 9.4430548 7.6120126 -1.2522259 2.3327938 8.1907699 -1.2522259 4.3024141 2.0697709 4.9572785 6.1412591 2.9177563 10.5110389 0.3327366 7.7562554 10.2311386 9.6859359 3.9572832 9.9560610 12.4522706 8.5308249 2.0697709 4.0332292 10.7562552 3.8771062 NA 1.0697709 1.9177373 15.041193 5.937650 8.144431 12.534096 10.011096 10.506466 12.262910 11.961994 8.344016 10.148172 14.215209 10.988320 9.079863 8.905174 2.835298 7.672639 11.282373 11.265004 11.851442 8.096555 12.820207 9.857004 5.792220 9.308159 7.722241 11.004472 7.317682 6.489294 11.685200 7.290858 2.654710 10.160926 6.215432 7.689930 10.955146 10.401120 9.850458 8.933941 9.786060 12.204823 6.455186 12.566038 9.790854 10.179846 9.327143 11.325963 10.532870 10.700932 10.300496 8.525904 NA 9.076232 7.559715 11.374676 6.255622 10.965481 7.427307 10.748179 10.533688 7.792658 13.633475 10.589391 9.702023 11.869522 11.019290 2.207268 -1.252226 10.490978 9.645672 9.429065 TCGA-EW-A6SD 32 0 NA 1010 breast stage iib t2 n1a m0 female 2012 NA yes infiltrating ductal carcinoma 2 black or african american hispanic or latino NA NA 4 4 1 2 2 6 2 2 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.5213855 9.4914669 11.2760903 9.2166278 9.1404868 9.9366287 9.6830618 9.9329231 11.3383437 14.0669159 9.7336372 11.0052840 3.6518439 16.8935235 4.4173800 10.3960042 7.5904426 9.1057996 6.6991490 12.9339277 NA 11.8582064 6.5523079 9.0644892 11.0052840 9.4358236 5.1372699 9.8915213 11.0277514 -0.2549779 9.1680683 7.3110062 NA 6.4931461 10.6029336 9.7913944 9.7250922 11.2275084 9.7610643 11.2828989 8.2002797 9.2176434 14.6276433 7.6843847 8.7179324 11.0361233 12.5730890 4.2685167 0.3298699 8.9248615 11.1049765 -1.2549779 10.5683197 4.5778397 7.1878964 5.3888095 10.5841563 11.7065831 9.5304050 11.9352402 12.7431022 6.4173783 10.4257515 9.7170994 11.7175734 10.9887216 4.9148754 11.6467622 9.4049485 -1.2549779 10.6378747 9.2714518 2.8332544 5.4864183 11.4732982 10.1107282 10.9041932 9.9653309 1.3299273 7.7393060 12.7883217 13.1088819 10.1910019 9.4566195 0.088322 0.105620 0.088756 0.038834 0.178360 0.191540 2.518200 3.656900 -0.264270 0.316060 0.496220 0.115130 -0.282510 0.117030 0.117030 0.117030 -0.608210 -0.614940 0.086730 0.104010 -0.276860 -0.613600 3.656900 2.885300 -0.171010 0.105030 0.105030 0.112780 -0.616960 -0.610620 0.000000 0.067475 -1.003500 1.478700 -0.626300 -0.624510 -0.177850 -0.627890 -0.633730 0.101240 -0.260050 -0.632470 -0.612450 -0.612450 0.032907 0.032907 -0.282510 -0.280430 -0.613410 0.117030 -0.612540 -0.621950 -0.608210 -0.612160 -0.612160 0.086730 -0.557030 -0.557030 -0.323510 -0.218930 -0.613600 -0.590150 -0.564810 -0.171010 0.105030 0.112780 -0.327920 0.053442 -0.621270 -0.113 -0.228 0.117 0.117 -0.608 -0.608 0.000 -0.557 -0.297 0.237 -0.239 -0.578 -0.578 -0.589 -0.589 -0.066 0.105 -0.612 -0.612 0.113 0.113 -0.328 -0.621 0.000 0.000 0.000 0.000 -0.590 -0.411 0.192 -0.074 -0.222 -0.222 -0.158 -0.259 -0.626 0.225 -0.612 -0.612 -0.132 -0.132 -0.113 -0.228 0.117 0.117 -0.608 -0.608 0.000 -0.557 -0.297 0.237 -0.239 -0.578 -0.578 -0.589 -0.589 -0.066 0.105 -0.612 -0.612 0.113 0.113 -0.328 -0.621 0.000 0.000 0.000 0.000 -0.590 -0.411 0.192 -0.074 -0.222 -0.222 -0.158 -0.259 -0.626 0.225 -0.612 -0.612 -0.132 -0.132 8.2821710 1.3299273 6.9098595 10.6256840 10.6958729 5.1137213 11.4204686 9.0247837 9.0129097 NA 14.5487053 11.4587278 1.9148706 0.3298699 4.2685167 7.8921572 5.5904433 10.8194285 12.1129133 10.6962372 8.6962373 4.3596617 7.7279463 9.9525770 7.9761740 7.1286563 3.4998459 NA 10.8511883 2.6518439 5.9737720 9.2753589 9.5222078 10.5319327 10.1733127 3.3888095 9.4669062 1.5523279 8.3815771 12.3885833 7.7020549 6.9347771 -1.2549779 8.1221633 6.7336377 5.0487332 3.8742363 2.3299273 5.6991490 3.7019371 4.2995377 9.7484705 -0.2549779 11.2232165 10.3143335 9.3091020 4.9148754 10.7631527 13.8796596 8.3761297 5.9544057 4.2685167 9.5935754 2.9148706 NA 1.5523279 0.3298699 12.042403 7.756180 9.352283 16.893523 10.207455 10.654471 12.933928 10.620702 9.021077 10.469381 13.386440 9.645819 8.924861 9.119992 2.066881 9.896603 12.642325 11.7936097 12.5173702 5.8429839 13.6103441 8.4297013 6.6874667 9.3806706 7.9347771 11.1754156 7.5230295 8.8755230 9.7336372 9.3448653 NA 10.9571449 8.1372699 7.6471771 13.6749506 11.6495872 10.2069435 7.5651318 9.5691157 9.9205020 8.8403496 11.0447558 9.7250922 9.7818129 10.3711179 10.7769982 10.6237699 10.3883578 10.8180899 9.1910019 3.6991518 9.3333768 6.6626228 11.1049765 8.9433974 10.5683197 6.2918466 11.0365492 10.5841563 8.0307709 14.3065081 9.8370490 9.8042971 12.4855766 11.7177529 3.2685093 0.3298699 9.8729469 9.9689542 9.2156114 TCGA-GI-A2C8 63 0 NA 225 breast stage iiib t4b n0 mx female 2004 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 2 5 1 2 2 3 4 6 2 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.635659e-06 6.935946e-07 16.4948453608247 20.6185567010309 3.09278350515464 32.9896907216495 26.8041237113402 10.770101074 10.196430124 11.598083634 9.572470590 7.916674882 9.061968400 9.905139213 10.029536674 10.101179409 12.381636334 11.645273798 10.550746785 1.228172218 9.227369497 3.630277319 11.230788908 5.476102973 8.559091774 10.505296100 12.516134454 0.742782340 13.695853092 5.398100641 9.506511300 11.373561107 8.046528712 -0.579275081 12.406395004 7.247368361 3.668743189 8.220101613 7.625391050 0.005759269 5.733704125 9.880763724 10.669933304 8.000135810 11.637717238 9.563565052 11.775069230 1.005759269 10.350817884 14.626632186 7.832415365 9.267877283 9.626613075 10.935040743 4.959978756 6.994466585 9.706799893 10.820097809 NA 10.708532225 5.363335807 7.093245355 5.079032437 10.681445400 11.612341808 10.479149907 11.797623553 12.833125066 8.141919112 10.684382466 9.855880563 11.235802796 11.281906735 4.550100313 12.626994802 13.145706699 -0.579275081 10.575954316 8.360398956 2.769200471 6.800198437 8.959978756 9.841832735 10.074112823 11.775207002 7.172363499 7.152138791 12.985148007 12.248857135 10.158912080 9.699850035 0.4708400 0.4708400 -0.3469800 0.3119300 0.6573700 -0.0158790 -0.3632900 -0.0193140 0.4046100 0.4046100 0.0047165 0.0669450 -0.2610700 3.6569000 0.7318900 -0.0117490 0.0726840 -0.3544200 -0.0186280 0.0310140 -0.7066600 -0.3495000 -0.3366400 3.6569000 0.0095883 0.0095883 0.0095883 0.3889900 -0.3409000 -0.3225100 0.0065262 -0.3469800 -0.3520200 -0.3535000 0.0133530 -0.0048461 -0.3824600 -0.0193140 0.0000000 0.5385400 0.3539800 0.0230050 0.1990800 0.0674930 0.0674930 0.3252700 -0.2610700 0.2835800 -0.3572600 0.0248290 -0.0117490 0.0083351 0.0726840 -0.3544200 -0.3544200 -0.0186280 0.0310140 0.0310140 -0.0074720 -0.3317900 -1.0525000 -0.3366400 -0.3531100 0.0095883 0.0095883 -0.0041546 -0.3611300 0.0075000 -0.3384800 0.000 0.000 0.000 0.000 0.000 -0.354 0.000 0.000 0.000 0.391 -0.332 -0.328 -0.328 -0.334 -0.334 0.000 0.000 -0.323 0.148 0.000 0.389 0.000 0.000 -0.352 0.000 -0.035 0.312 -0.323 -0.323 0.000 0.000 0.000 0.000 0.334 0.334 0.000 0.000 0.000 0.258 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.354 0.000 0.000 0.000 0.391 -0.332 -0.328 -0.328 -0.334 -0.334 0.000 0.000 -0.323 0.148 0.000 0.389 0.000 0.000 -0.352 0.000 -0.035 0.312 -0.323 -0.323 0.000 0.000 0.000 0.000 0.334 0.334 0.000 0.000 0.000 0.258 0.000 0.000 8.691115016 -1.579059544 5.998249671 10.139352712 11.850880313 6.162961244 11.268268757 9.529135152 9.172363999 2.742739233 14.296209251 12.386013401 4.005786212 2.420832692 4.148738913 6.497634718 5.266310560 11.608017234 12.433618952 10.989013516 8.945361603 -0.579275081 7.622943525 10.600417976 7.900599975 5.303462955 NA -1.579059544 11.051542041 5.975407786 6.912672616 8.121259457 7.208722085 11.016741652 10.320176750 6.791506750 7.632708083 -1.579059544 7.539760584 11.827024871 8.877174297 8.477457556 -0.579275081 7.128178933 8.715440742 0.005759269 5.497634718 2.121247540 4.724601163 4.990673553 2.880254513 9.454930939 NA 7.671118546 10.037368631 9.369917037 4.944380591 9.260023538 12.078138296 9.241796576 2.944389962 3.508276515 10.666669616 2.668754533 NA 1.420832692 3.064675949 12.540698 3.847085 9.444574 9.227369 10.105130 10.675848 12.516134 10.560371 8.979241 10.595434 12.869969 9.573105 9.706800 7.064676 NA 9.451487 12.220405 11.3838965 11.6708221 8.6192648 13.3951869 8.9206658 5.3981006 8.4652142 6.3633341 10.7412961 7.6278344 5.9677150 11.6452738 7.5397606 1.0057593 11.0392054 6.9677139 5.6773588 10.9539062 10.4497619 11.0854893 8.1988968 8.2678770 10.9849694 5.0932432 13.1950978 8.0001358 10.3973839 9.6192650 11.6703778 10.0048428 10.7114147 10.7131415 9.7314326 0.4208327 9.2912925 8.8361286 10.8200978 5.0057817 10.7085322 8.8637635 11.4068396 10.6814454 7.4895983 13.1294188 10.0433293 10.8494418 12.5652391 9.2795779 0.4208327 0.4208327 10.5510687 10.2317931 10.5571702 TCGA-GI-A2C9 58 0 NA 3342 breast stage iib t3 n0 mx female 2003 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 3.190535e-06 1.005712e-06 7.31707317073171 11.3821138211382 7.31707317073171 32.520325203252 41.4634146341463 10.752516797 9.385631637 10.847353139 9.481079923 9.052496050 8.927459764 8.536626056 10.719181044 11.826279983 13.223076080 11.508293552 10.364591144 -1.582512001 11.754191409 3.843953704 10.149852270 7.607509345 8.277219507 11.586356995 5.032396230 -1.582512001 9.428912228 9.114652287 9.503867468 10.638063155 5.515715605 -1.582512001 10.457632046 9.989911450 1.587605020 9.075896254 8.840800893 0.002594517 2.877116001 9.345462909 11.065143323 8.961683227 9.338037704 10.163359221 10.786736835 1.877116001 6.689148173 15.446605335 8.621681212 9.685056760 10.870440860 10.701352038 4.843948680 2.877116001 9.880698227 10.723461632 NA 10.483774067 7.660858755 6.602560805 6.225039655 10.701641319 11.574873903 10.449730559 11.823889883 13.029516573 9.036987887 10.230263307 9.773355347 11.611672158 11.063118111 4.348423651 12.734178545 8.793810392 4.956841927 10.538570754 9.038821069 3.584000383 6.032394026 11.143051139 10.453171330 10.764198591 10.334683909 2.118127122 6.536626444 12.791297728 11.648455871 9.314774005 9.236267060 0.6005200 0.7503200 -0.2007400 0.8528400 1.0874000 0.3881600 -0.8274100 0.2816100 -0.4300700 0.2697000 1.2486000 1.6797000 -0.3988600 0.5825600 0.0175440 0.0175440 1.5325000 0.4996000 0.4096500 -0.0829340 0.0061090 -0.1565600 -0.3144700 0.1172400 0.2196000 0.0224440 -0.0168800 0.0878240 -0.0758780 0.1520300 -0.1623000 -0.3691800 -0.3717800 -0.3163200 -0.5299100 -0.5776900 -0.8274100 -0.2649200 0.1359800 -0.3519000 -0.2339800 -0.0029091 0.5429400 -0.3751600 -0.3751600 -0.3796600 -0.3988600 -0.8664900 -0.3525900 0.0175440 0.1608500 0.5445300 1.5325000 -0.5083800 -0.4882700 0.0000000 -0.3521300 -0.3521300 -0.9377700 0.5893700 -0.2530900 -0.3144700 -0.4859600 -0.0201380 -0.0168800 -0.8112900 -0.3058700 0.4704900 0.6001600 1.120 0.000 0.000 0.000 1.481 0.000 0.000 -0.352 -0.100 0.320 0.320 -0.253 -0.253 0.549 -0.771 0.197 0.000 0.161 0.161 0.000 0.000 -0.306 0.600 0.266 0.266 -0.295 -0.295 -0.327 0.000 0.000 -0.475 0.415 0.415 -0.352 -0.352 -0.427 0.368 -0.375 -0.375 0.245 0.245 1.120 0.000 0.000 0.000 1.481 0.000 0.000 -0.352 -0.100 0.320 0.320 -0.253 -0.253 0.549 -0.771 0.197 0.000 0.161 0.161 0.000 0.000 -0.306 0.600 0.266 0.266 -0.295 -0.295 -0.327 0.000 0.000 -0.475 0.415 0.415 -0.352 -0.352 -0.427 0.368 -0.375 -0.375 0.245 0.245 8.685642 NA 6.597594 10.263175 10.954661 6.389343 11.002178 8.255013 8.630230 1.739632 11.706983 11.957038 5.047041 NA 3.739611 9.264742 4.607508 10.182142 12.245623 10.575663 8.954903 4.199044 8.629573 10.504816 5.526210 4.225044 -0.582296 4.440055 11.277996 1.877116 8.815360 9.019456 7.523593 10.837742 10.068737 3.061534 8.977062 7.773036 8.518347 12.945956 8.389228 7.100679 NA 4.792725 8.475677 1.877116 2.118127 5.145604 3.810001 3.324580 5.656090 11.919273 7.002647 10.580391 10.687980 9.357998 6.693809 8.860628 13.050283 8.972274 3.324580 3.417691 10.173407 1.739632 7.691480 -1.582512 8.037905 13.513992 7.043394 8.912541 11.754191 10.080642 10.832898 5.032396 11.068961 8.963615 12.100789 12.673820 11.243439 9.880698 8.304906 3.172568 8.187523 10.519332 10.072321 11.388150 5.909538 14.875305 8.539219 5.987541 8.083021 4.462079 9.454401 6.848137 4.909538 11.508294 8.468894 2.739611 10.323824 8.967470 8.252504 13.429305 10.700484 10.601940 7.697713 8.462079 10.177989 4.118127 10.770542 8.961683 9.950528 9.666798 12.562423 10.157465 11.315530 10.260821 9.551469 -1.582512 9.715301 7.061252 10.723462 5.775238 10.483774 9.549542 10.044307 10.701641 7.903836 14.288459 10.858813 10.972514 12.337759 10.897213 NA NA 10.970594 9.761981 8.904520 TCGA-GM-A2D9 69 1 1812 NA breast stage i t1c n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 2 2 2 4 2 1 3 6 2 0 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 9.432887e-06 3.398614e-06 8.68421052631579 80.7894736842105 1.84210526315789 7.10526315789474 1.57894736842105 10.1505843 9.3135585 10.9056078 7.6196617 7.7513673 9.5109093 10.5087630 9.5094787 10.2412826 12.7044701 11.1237212 10.0655286 2.1171631 12.8250956 3.4390912 10.0645547 4.5765947 8.6614817 9.6170073 13.0456797 2.6297996 13.7253391 7.1688235 10.6541921 10.3499820 7.5490068 -0.4677329 10.0934868 10.5051787 3.2326454 7.2937503 6.5094789 NA 3.2326454 9.0059046 9.9626514 10.0220468 10.5272593 9.8001559 9.6170073 2.8541353 10.7819049 14.6728289 8.2830064 10.6608376 10.8433795 10.5051787 4.7021256 5.2046259 7.8809273 10.8501767 1.1171631 11.4372097 5.0240537 5.1171631 4.8541253 10.2107989 12.0817429 10.8569420 11.6540561 12.6024875 8.3491826 10.5895137 10.1524187 10.6889140 10.5881591 3.6196595 11.3874567 9.2987277 NA 9.9761784 8.4239827 4.1177615 4.9584622 10.9341450 9.8036618 9.0079321 9.2770328 2.1171631 9.4893009 12.4551548 11.3407609 9.7257243 9.7207877 1.09710000 1.12180000 0.00277450 -0.00484610 0.00305220 0.00346870 -0.00138580 -0.00296100 0.69167000 0.65903000 0.00097064 0.00291330 0.00291330 0.00986690 0.73000000 0.66586000 0.00124810 1.88630000 0.00124810 0.00346870 0.00652620 -0.00857660 -0.00857660 -0.00857660 -0.01780300 -0.01780300 0.43682000 0.00277450 -0.01230000 -0.01230000 -0.00180140 0.00277450 0.00305220 -0.00609040 0.00346870 0.00346870 -0.00138580 -0.00296100 -0.00296100 -0.00180140 -0.71167000 -0.71194000 0.00000000 0.00000000 0.00000000 0.00000000 0.00291330 0.01126100 0.00986690 -0.02835500 -0.70612000 -0.70612000 0.00124810 -0.70406000 0.01167900 0.00124810 0.00084072 0.00084072 0.01768400 -0.74027000 -0.00857660 -0.00857660 0.00819590 -0.01780300 0.43682000 0.00277450 -0.00387790 0.00221930 0.00221930 0.000 0.000 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 -0.224 -0.705 0.000 0.000 0.000 0.000 0.000 0.000 1.097 1.097 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.678 0.000 0.000 0.000 0.000 0.000 -0.224 -0.705 0.000 0.000 0.000 0.000 0.000 0.000 1.097 1.097 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 0.000 0.000 0.000 0.000 0.000 9.4658896 6.4025636 6.3266146 11.4551548 11.2575651 8.0647886 11.6650198 8.4325223 10.0328615 1.1171631 11.7928244 11.5055195 2.7021256 1.5322172 1.5322172 8.2770326 2.9916261 11.3682492 10.5820474 11.0601645 9.5094787 5.4629357 8.5094789 10.8979744 6.5208842 6.6920701 1.5322172 NA 10.6825808 6.5094789 7.2046240 8.2395580 6.3003837 10.7366661 10.4518071 4.1760514 8.6302311 NA 7.2532982 12.7178486 9.5834078 9.0537994 1.8541154 0.5321673 8.9730679 NA 6.0557618 NA 4.6614817 5.2326377 2.5321923 11.0043819 -0.4677329 7.0867880 10.5656218 8.9563651 6.0240515 10.1459883 11.7519724 8.1321115 3.6196595 3.7021256 11.2494468 1.1171631 NA -0.4677329 0.5321673 13.396846 4.439091 8.323362 12.825096 10.711486 11.004890 13.045680 11.838545 9.497983 9.843947 13.493558 8.838261 7.880927 9.422463 NA 7.462937 11.477277 10.9657843 12.6835326 4.7021256 13.4462092 8.9875261 4.8541253 8.7145931 6.9245168 10.0764775 6.9159033 8.9330783 11.1237212 8.5094789 1.1171631 11.2849976 3.3395507 5.5051224 10.0528176 10.4900264 11.1810058 6.9668273 10.0089451 9.5151924 4.4863926 12.8257912 10.0220468 10.9558400 10.3028628 10.6491925 9.7108638 9.3217324 10.5066134 6.6614817 2.9916261 8.9212277 6.8176015 10.8501767 5.0867880 11.4372097 6.6090147 10.8974277 10.2107989 7.2116791 14.7572556 10.5772759 10.1913028 12.2721903 10.7901759 2.3395650 0.5321673 10.2575651 9.3886244 9.8875499 TCGA-GM-A2DA 46 1 6593 NA breast stage iib t2 n1b m0 female 1993 NA yes infiltrating ductal carcinoma 2 white not hispanic or latino NA NA 3 3 NA NA 6 4 1 9 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 3.121176e-07 33.3333333333333 22.2222222222222 7.40740740740741 18.5185185185185 18.5185185185185 10.6471810 9.0873936 10.7297518 7.6578858 8.1955425 9.2428483 9.7840629 10.4948523 9.8381157 11.7223533 11.4445945 10.0974374 1.7036766 15.4804651 3.7036877 9.8243593 6.0729226 8.9704761 8.5449919 12.4888694 0.1187584 13.5410546 3.7036877 10.0256176 10.1861613 7.1521499 1.1187584 9.7822672 9.3085516 3.7036877 8.1299542 7.0494641 1.1187584 5.1631203 9.1130803 10.2454314 9.2785984 10.4784765 9.8551289 10.9836869 11.9531980 10.8346889 14.4611489 8.9320591 10.5270566 10.3011213 9.9875495 4.9260801 5.8191674 8.5196064 11.3696175 NA 10.9937083 5.0256180 7.7186397 4.4406533 10.5024313 11.9512214 10.2035353 11.9963945 12.8775747 7.7186397 10.6704352 10.3607100 11.1208387 10.7867255 3.7036877 11.6471811 10.2298626 NA 10.0583062 8.4361393 3.8191674 3.2886539 10.5832727 10.3583255 9.8381157 9.5924327 2.1187252 8.9767079 13.2856746 12.4133477 9.2298626 10.0656332 0.00027728 0.47341000 -0.00083160 -0.00083160 -0.00318590 -0.00193130 -0.00083160 -0.00138580 -0.40263000 -0.00083160 0.37522000 0.01098200 0.01098200 0.37594000 -0.00027724 -0.00027724 0.00444110 0.00805670 0.00346870 0.01000600 0.00624810 -0.46717000 3.65690000 1.75130000 0.02482900 0.02482900 0.02482900 0.01419000 0.01391100 0.00027728 0.00346870 -0.00083160 0.00930980 -0.51331000 -0.00193130 -0.00124730 -0.00083160 -0.00138580 -0.00249790 0.00666530 0.00666530 -0.40584000 -0.00156220 -0.00156220 -0.00156220 0.01265500 0.01098200 0.01098200 0.00208050 -0.00027724 -0.00027724 -0.00027724 0.00444110 0.00805670 0.00805670 0.00346870 0.01000600 0.01000600 0.00624810 -0.48621000 -0.48239000 -0.47702000 -0.08559000 -0.47723000 0.02482900 0.01419000 0.01209700 -0.48218000 -0.48218000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.489 0.017 -0.482 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.402 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.489 0.017 -0.482 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.482 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.402 0.000 0.000 0.000 0.000 0.000 9.4563489 NA 6.2272520 11.2867722 10.7027499 7.8452178 10.6245385 8.8450133 10.1112688 4.6422915 12.1010075 11.2480100 4.0256136 2.9260753 4.0256136 7.3948511 3.1187252 11.2614722 11.0787288 10.3073158 9.1794230 4.2886539 8.8191668 10.5802064 7.7334370 6.2886520 1.7036766 NA 10.7232801 8.1243514 8.6185727 7.6265216 6.5616698 11.5217123 10.1452504 2.4406599 8.7769383 NA 7.2480101 11.7652856 10.5627065 9.2659319 0.1187584 2.4406599 8.2061900 2.1187252 5.9767073 1.1187584 7.7840629 6.3481226 3.9260848 10.2492975 0.1187584 9.1901894 10.2899037 9.5637418 6.0729226 10.4552335 12.0154377 8.1187267 3.8191674 5.3666544 9.8802782 1.1187584 NA NA 2.1187252 11.628309 5.791152 8.569938 15.480465 10.597497 10.200876 12.488869 11.751722 8.945276 10.212805 13.439950 10.348747 8.519606 9.590402 2.926075 7.711184 10.884427 10.9720365 12.8239273 6.9260813 12.8050020 9.1901894 7.9452753 8.3761150 6.8329723 10.1596193 8.3330462 8.8329726 11.4445945 7.9516169 2.9260753 10.5974965 4.4406533 7.2751645 10.0960068 10.2075151 10.5259947 7.8398261 10.3342600 9.4541173 7.7697783 13.7962836 9.2785984 11.0120285 9.8295334 9.3060790 9.5904022 9.2088394 10.2220148 7.1955425 5.3666544 9.9777958 8.6952868 11.3696175 7.7625834 10.9937083 7.0013699 11.2008760 10.5024313 7.1631213 14.3407656 10.6363963 11.0006056 11.7013394 10.4029727 0.1187584 0.1187584 10.7643854 9.1901894 10.1229474 TCGA-GM-A2DB 62 0 NA 2406 breast stage iia t2 n0 (i-) m0 female 2006 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 4 6 1 2 6 2 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 7 7 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 2.254182e-06 3.467973e-07 13.9240506329114 17.7215189873418 5.06329113924051 30.379746835443 32.9113924050633 9.4362256 8.5337926 10.5330670 7.1616529 9.1080722 10.6825993 9.5496705 11.2124089 10.3775907 13.8991823 10.5029868 10.8446479 3.5766914 12.0800196 4.4346749 11.5924542 7.0196341 9.0113190 5.0029545 12.2950096 -0.4233328 6.7365616 6.3448746 8.6170354 10.6508322 7.0605068 2.8986147 9.3727304 13.3353304 1.1616297 7.3968693 7.2631913 NA 3.3840498 9.5823153 9.7751358 9.3332471 9.6628270 9.4715086 10.9533588 8.5103812 6.6427795 14.4063640 6.2846011 9.0175598 10.1812440 9.9998067 6.6101139 4.5766914 8.8873035 13.9292860 NA 10.5667947 4.4835836 6.1766040 4.2771293 9.4970437 11.8449403 10.2883578 11.0376585 12.7712937 7.4895799 10.4284398 9.7264379 10.9143127 10.0185975 3.0361165 11.3812252 9.0884435 NA 11.3535350 8.1728805 3.7751875 5.9342428 8.7910098 9.2823230 9.8031030 8.9732956 1.5766672 9.3678537 12.6766960 12.5926284 9.9871421 10.0217055 -0.00719580 -0.01684100 -0.26673000 0.70232000 0.10170000 -0.05199100 -0.26757000 0.26341000 -0.14387000 -0.05037000 0.23504000 0.18177000 0.17498000 0.00000000 0.23581000 0.22638000 -0.00968060 -0.00360110 -0.25152000 0.65167000 0.00332990 -0.26260000 -0.13678000 0.00277450 0.02918400 0.00805670 0.03976100 0.01153900 -0.00041585 -0.00719580 0.13658000 -0.27212000 -0.25285000 0.10526000 -0.05199100 -0.05469000 0.04414800 0.26341000 -0.28430000 0.69802000 0.35724000 -0.14387000 -0.40030000 -0.40030000 -0.18710000 -0.18710000 0.17498000 0.41764000 0.23752000 0.00000000 0.14965000 0.13672000 -0.02278700 -0.00360110 -0.01381500 -0.24619000 0.73000000 0.71678000 0.00332990 0.03622900 -0.26260000 -0.13678000 -0.04563500 0.03877100 -0.47870000 -0.01188700 -0.10173000 -0.25890000 -0.20921000 0.182 0.182 0.200 0.200 0.000 0.000 -0.243 0.717 0.000 0.216 0.216 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 0.190 0.190 -0.031 0.236 -0.240 0.000 0.000 0.000 -0.268 -0.051 0.698 0.357 0.000 0.000 -0.400 -0.187 0.000 0.000 0.182 0.182 0.200 0.200 0.000 0.000 -0.243 0.717 0.000 0.216 0.216 -0.252 -0.252 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.228 0.190 0.190 -0.031 0.236 -0.240 0.000 0.000 0.000 -0.268 -0.051 0.698 0.357 0.000 0.000 -0.400 -0.187 0.000 0.000 9.6930347 NA 7.9818321 11.6561755 11.3369949 8.2098676 10.6962803 7.6952687 8.8850298 NA 14.0792118 11.8063478 3.1616459 NA 3.8246151 7.4284397 2.7466137 11.6724174 11.3707004 9.7739075 9.7970691 4.4346749 9.6101137 11.3572306 6.9945435 7.3514782 6.2631922 NA 10.5074281 4.7466137 6.4955545 10.4284398 8.3248835 9.9581148 8.9232045 2.1616620 9.2473470 -0.4233328 7.5990589 11.5521805 8.5962815 11.4272683 NA 6.4715078 7.8574617 2.3840498 3.8986147 9.4158945 6.1002523 2.3840498 3.5766914 10.1682132 4.8620943 7.9945435 10.3349140 9.7315089 6.5424747 11.2424708 11.9982297 9.7922238 3.2771367 5.1914008 9.8918403 0.5766672 NA 3.4835836 5.5308885 12.214925 8.044296 9.670768 12.080020 9.751617 11.206047 12.295010 7.981832 8.960395 9.482078 12.644293 9.599058 8.887303 7.434672 3.483584 7.068544 10.243802 10.368668 14.054070 4.384043 13.426382 9.433116 7.776363 8.979703 7.716242 9.236847 7.669448 7.679978 10.502987 9.225947 4.824620 11.101232 4.862094 8.144875 11.613895 10.072546 11.455891 9.945197 10.765898 7.297790 6.565375 12.702212 9.333247 11.017560 10.751616 9.900871 9.044296 8.266689 9.782484 7.131280 7.669448 9.823847 11.391970 13.929286 9.066539 10.566795 5.131281 9.929838 9.497044 8.080914 14.166400 10.965246 11.170082 11.731192 11.655509 7.176604 2.746614 10.595586 9.834079 8.634683 TCGA-GM-A2DC 57 0 NA 2535 breast stage iia t1c n1a m0 female 2006 NA yes infiltrating ductal carcinoma 1 white not hispanic or latino NA NA 5 2 2 2 1 1 1 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 3.81477e-07 1.733986e-07 43.75 12.5 0 25 18.75 10.5785638 9.7836721 11.5076841 7.2745897 9.2656406 8.9145660 10.5435592 8.9894660 9.7409561 13.4812156 11.8866960 9.8873213 1.4518573 13.5961989 -0.8701235 9.9564797 6.5975371 8.6613128 4.8023587 12.8363193 1.9372691 14.8738190 1.1299424 9.6940808 10.9726744 8.4013941 NA 8.2305936 6.6768259 4.7148939 8.9596540 6.0247496 NA 3.5893680 8.6076895 9.5832018 8.9227215 9.4686676 8.3611525 10.3289900 3.7148939 10.1460430 13.9515558 8.0809827 10.7782888 10.1348539 10.5970273 4.1299341 7.4918747 8.1214532 11.6864373 0.7149269 10.2456252 4.0841238 5.1960208 4.0841238 8.7574650 12.1341517 11.0517722 11.5356046 12.4943395 8.6036371 11.5551472 10.5011633 10.6554521 10.7674618 2.5893560 11.2537293 11.9012144 -0.8701235 10.2508171 9.6816395 2.3062622 3.9372879 9.4819748 8.8390151 10.6983624 10.4456469 0.7149269 11.4251262 13.0354123 9.8873213 10.1383599 9.6797158 1.53380000 1.49530000 0.00444110 0.00444110 0.00000000 0.55390000 -0.64227000 -0.63661000 1.57790000 2.17560000 2.04010000 0.78659000 -0.63017000 -0.00013862 -0.00013862 -0.00013862 0.02763800 0.02763800 -0.66205000 0.05936600 -0.03871400 1.54430000 0.59746000 0.59746000 -0.57773000 0.49510000 0.49510000 0.58596000 -0.05603800 -0.08094000 -0.05900000 0.00444110 0.00097064 -0.00989850 -0.01367700 -0.01367700 -0.64227000 -0.63661000 -0.63661000 0.60684000 0.00763920 -0.00221680 -0.06356900 -0.06356900 -0.06356900 0.00791750 -0.64010000 -0.00981850 -0.00013862 -0.00013862 0.00388540 0.00388540 0.02763800 0.02763800 0.02763800 -0.64029000 -0.58847000 -0.58847000 -0.05287400 -0.64762000 -0.63642000 0.59746000 0.44257000 -0.56793000 0.49510000 0.55142000 0.90150000 0.61190000 0.58220000 0.000 0.000 0.000 0.000 0.000 0.000 -0.662 0.000 0.000 -0.060 -0.658 -0.039 0.597 0.443 0.443 -0.578 -0.083 0.000 1.495 0.551 0.551 0.902 -0.629 0.000 0.000 0.000 0.000 0.000 0.000 0.554 0.554 -0.637 -0.637 0.607 0.607 0.759 0.759 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.662 0.000 0.000 -0.060 -0.658 -0.039 0.597 0.443 0.443 -0.578 -0.083 0.000 1.495 0.551 0.551 0.902 -0.629 0.000 0.000 0.000 0.000 0.000 0.000 0.554 0.554 -0.637 -0.637 0.607 0.607 0.759 0.759 0.000 0.000 0.000 0.000 9.1029111 NA 5.0841281 10.3599517 11.8711876 9.0177917 11.7928221 8.1993273 10.8299504 0.1298765 10.3820053 11.4911294 7.0899335 6.5645596 2.1299424 7.0186742 3.8848226 9.8595520 11.4371321 11.8398766 9.6554520 NA 8.6357428 9.0186745 6.3197552 6.9178339 1.9372691 NA 9.2847494 6.8372898 4.9628220 8.1933263 5.2998564 11.0344492 10.8989426 3.7148939 8.3320549 NA 5.6997876 11.2097493 10.8334023 8.3778586 NA 6.9372867 10.0928273 NA 5.1299300 1.1299424 4.0841238 4.3006582 1.1299424 9.8629466 NA 6.3683353 9.2694825 9.7961553 4.1299341 8.8023567 10.9548900 7.9047183 4.6845214 4.4153328 11.6534932 7.4473436 NA 5.5728745 1.9372691 14.3994181 5.1072108 9.1171953 13.5961989 9.3527261 11.0536301 12.8363193 12.7931558 8.8041236 9.9080084 12.9720851 10.5939664 8.1214532 9.6931275 0.7149269 7.6921740 11.6838005 10.7186459 11.5952426 7.8372905 13.9006953 8.5603837 4.5222504 9.4563608 8.0125743 10.1798683 5.8023561 8.7186459 11.8866960 6.9501103 -0.8701235 9.3647486 4.2592122 6.5073158 10.0993178 8.5624733 9.9096506 9.0087026 10.2034034 9.8346995 4.4874863 12.6040415 8.9227215 9.9340622 10.2929518 12.1671350 8.4653215 9.6564304 10.4891318 8.2094158 NA 9.5501020 5.4697818 11.6864373 4.8578516 10.2456252 5.3587514 11.6828404 8.7574650 7.4060553 13.2439175 10.4697813 10.6997869 12.1118552 9.1619771 0.7149269 -0.8701235 10.5027963 8.7035783 10.1750083 TCGA-GM-A2DD 53 0 NA 2282 breast stage i t1c n0 (i-) m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 3 4 3 2 6 1 2 6 2 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.075072e-06 2.774378e-07 12.5 17.5 7.5 30 32.5 9.5521065 9.1762395 10.6347787 7.7247601 8.3516067 9.3186418 9.4421336 10.4179552 10.5838976 12.3246037 10.2521098 10.5605901 -1.0235630 12.9707438 5.1058499 11.0938856 6.1263142 8.4563474 7.3986317 11.7969456 NA 10.1564763 4.3341177 10.6363447 10.9394632 7.2573379 2.5615217 11.0325274 11.2122823 1.2984824 8.1006886 7.6770071 -1.0235630 5.2053847 8.9849957 10.3450736 9.5079486 9.9021217 9.1032718 10.4457002 3.4360019 6.9595604 14.9287624 7.3743275 9.0981008 10.8380419 10.3933647 4.2984970 3.1464923 8.4400918 11.7488818 -1.0235630 10.8047037 6.9481102 7.5502142 5.5912785 9.9183485 11.6759228 10.3324688 11.9034191 12.2883155 8.2642798 10.7019335 9.6856509 10.6946719 10.5191155 3.3688801 11.2521098 9.2468624 -0.0234164 10.5229794 9.0127407 3.3242346 7.1058499 11.1893675 9.4380466 9.7652856 9.3912524 1.2984824 10.0929112 12.6645989 13.4667913 9.9842953 10.2053859 0.13214000 0.12491000 0.57380000 0.26059000 0.07264200 -0.07747800 -0.15055000 -0.15055000 -0.25612000 0.25887000 0.25887000 -0.03108600 -0.13833000 -0.09208100 -0.16124000 -0.16124000 0.35561000 0.02182400 -0.24302000 0.05879500 0.34437000 -0.12200000 -0.16841000 -0.16841000 0.11932000 0.10865000 0.10865000 0.33060000 0.06565600 0.12491000 -0.23901000 0.05523000 0.07305000 0.04358200 -0.12797000 -0.12797000 -0.06222600 -0.15055000 -0.15055000 0.21606000 -0.12252000 -0.25612000 -0.03849100 -0.03849100 -0.03849100 -0.01491600 -0.13833000 -0.19074000 -0.29307000 -0.05980700 -0.16124000 -0.35179000 0.35561000 0.02182400 0.02182400 -0.24302000 -0.07334300 0.04684200 -0.09855000 -0.09802300 -0.12200000 -0.16841000 -0.03228800 0.11932000 0.10865000 0.31930000 -0.00032949 -0.11077000 -0.06155500 0.000 0.000 0.000 0.000 0.334 0.000 -0.243 0.000 0.000 0.335 0.335 -0.122 -0.122 0.000 0.000 0.109 0.109 0.125 0.125 0.319 0.319 0.000 0.000 0.248 0.000 0.000 0.000 0.000 0.000 -0.201 -0.201 -0.151 -0.151 0.210 0.210 0.003 0.259 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.334 0.000 -0.243 0.000 0.000 0.335 0.335 -0.122 -0.122 0.000 0.000 0.109 0.109 0.125 0.125 0.319 0.319 0.000 0.000 0.248 0.000 0.000 0.000 0.000 0.000 -0.201 -0.201 -0.151 -0.151 0.210 0.210 0.003 0.259 0.000 0.000 0.000 0.000 8.6856511 -1.0235630 6.9013798 10.8774340 11.2820590 8.2161658 10.9923307 8.9266856 10.0275653 2.7839176 12.1943735 12.2567217 2.4360019 3.6204222 3.5001264 7.5079484 4.2984970 11.8206845 11.1905827 10.0325274 9.0785429 4.6489946 8.5746196 10.5774093 8.8423004 12.5946085 6.7044875 NA 10.4774091 5.4843605 7.2573379 8.6472235 8.3986321 10.0830320 9.9285804 4.5912785 9.0127407 -1.0235630 7.7612022 11.9900643 8.6925290 8.8546181 3.0640378 5.9190826 7.7999343 0.9765836 4.9538472 13.3892032 7.5875923 2.7870145 5.1663901 10.4251997 2.9765653 8.3029966 10.7121232 9.7871389 6.0850911 10.8980363 13.2930609 9.9466731 4.4684204 5.2433530 9.7087346 2.6770120 NA 3.1464923 4.2619670 10.925766 7.440092 8.979382 12.970744 10.344528 11.429838 11.796946 9.806290 8.362430 10.150869 13.322250 10.619973 8.440092 8.596787 2.146492 7.210187 10.583435 11.270901 12.646006 4.859209 14.192706 9.603180 8.969506 8.166392 7.368884 9.617029 8.670054 7.271188 10.252110 10.121863 2.783918 10.236310 4.704490 7.652806 10.175012 11.013428 11.221228 8.034884 9.392309 8.210187 7.631203 11.380466 9.507949 10.598619 10.039288 9.679606 9.774229 9.997547 10.019594 7.121226 -1.023563 9.762518 7.724156 11.748882 7.161442 10.804704 6.515727 10.610017 9.918349 7.521454 14.161636 10.737287 10.922742 12.118993 11.188151 6.531155 2.783918 10.043329 9.522497 9.012741 TCGA-GM-A2DF 53 0 NA 2155 breast stage iia t1c n1a m0 female 2007 NA yes infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 3 4 1 5 5 4 7 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 7.282743e-07 2.427581e-07 27.5862068965517 20.6896551724138 6.89655172413793 34.4827586206897 10.3448275862069 9.8243645 8.5718364 10.5254186 7.7200281 9.1286105 8.2370034 9.3163951 10.7387976 12.6310346 13.0336884 11.1100535 9.7640055 1.3276874 11.4541568 2.5907457 11.1869346 5.0718699 9.1286105 9.4549309 3.7606681 NA 10.2207085 7.6711185 10.1407091 10.0036674 7.7131418 1.0057593 9.4066619 11.2309898 2.8131347 8.2725687 6.8001984 NA 8.0905909 8.1606006 9.9951768 8.8275564 9.1807081 8.9902007 11.0789197 3.7606681 7.8699682 15.5654881 7.4403269 9.3265830 10.0624201 9.8807637 3.6496385 -0.9942407 8.9201676 9.6405935 NA 10.5651594 5.6204926 6.7673330 6.3808212 8.9816304 11.5514708 10.3009773 11.2066809 12.1102173 7.5603711 10.5982394 9.7657204 10.2152357 10.6909691 3.0057772 11.8477398 8.0529060 NA 10.3528500 8.9305948 3.4652170 5.1956074 9.0678285 9.9744492 10.5570100 9.4151732 0.5907218 4.2152359 12.3989046 11.9072150 9.4805022 9.7421843 0.122510 0.137070 0.401160 0.212870 0.297290 -0.256330 0.328230 0.328230 1.126000 3.413400 0.398340 0.379630 -0.036491 0.189250 0.189250 0.076760 0.105170 -0.059335 3.656900 -0.062314 0.149100 -0.272320 0.031485 0.031485 -0.079164 1.251300 -0.239810 0.124220 0.114670 0.122510 -0.241060 -0.116880 -0.283420 -0.236760 -0.245290 -0.245290 0.328230 0.328230 -0.385340 0.189700 0.554130 -0.258130 0.484980 0.089177 -0.255350 -0.255350 -0.036491 -0.036491 -0.258980 0.189250 0.076760 -0.250900 0.105170 -0.044402 1.752500 -0.251280 -0.062314 -0.062314 -0.252690 -0.055116 -0.272320 0.031485 -0.092300 -0.088991 -0.239810 -0.267530 0.416360 0.133070 0.133070 0.380 0.000 0.000 0.000 0.000 0.000 -0.409 0.000 0.149 0.000 0.000 -0.272 0.000 0.000 0.000 0.000 -0.161 0.132 0.132 -0.268 -0.143 0.416 0.133 0.121 -0.114 0.213 0.213 -0.237 -0.237 -0.256 -0.256 0.328 0.328 0.116 0.116 0.140 0.398 0.485 0.230 0.000 0.000 0.380 0.000 0.000 0.000 0.000 0.000 -0.409 0.000 0.149 0.000 0.000 -0.272 0.000 0.000 0.000 0.000 -0.161 0.132 0.132 -0.268 -0.143 0.416 0.133 0.121 -0.114 0.213 0.213 -0.237 -0.237 -0.256 -0.256 0.328 0.328 0.116 0.116 0.140 0.398 0.485 0.230 0.000 0.000 9.601972046 1.590721770 7.841832892 11.361959176 11.662207236 6.923811175 9.748933802 9.081288225 8.852933626 0.005759269 13.706980504 12.638074426 2.912669024 2.706221094 4.813134719 7.885365705 4.093247468 10.886513796 11.513329270 10.151714497 8.862207739 NA 9.089261641 10.567547634 8.058350592 8.434142383 0.590721770 NA 10.489094312 4.327708918 5.760670720 8.378647303 9.281906851 11.109660263 9.549780818 3.912669024 8.723458902 NA 6.753974843 12.560730882 8.517535150 8.509607967 1.005759269 3.706221094 8.438324460 NA 4.760668059 NA 6.851271811 3.959974121 4.093247468 11.662207236 6.918671263 11.051542041 10.998012601 10.070525111 6.649638450 10.420995914 11.761295871 9.411987359 6.124723085 4.983062001 9.854405275 1.590721770 4.093247468 -0.994240731 9.147889470 9.585673 10.622331 9.402387 11.454157 10.446651 11.192516 3.760668 11.210659 8.651441 9.711415 13.132406 10.785502 8.920168 8.063774 1.590722 7.517535 11.483288 9.985921895 12.003314705 4.363332302 14.077369150 9.347834823 6.869968849 8.481515707 6.787142496 8.975629327 7.376470119 7.501637383 11.110053504 10.562767309 1.005759269 10.380821748 8.936519574 8.885334892 11.319515708 10.451314570 10.410391777 7.646027254 9.609408701 7.586983112 8.909664214 12.030584379 8.827556433 10.124074643 10.799791980 9.913424112 11.090922815 11.012809647 10.099860093 7.885365705 0.005759269 9.038365393 7.650684152 9.640593455 10.569931822 10.565159404 5.028149189 10.838672366 8.981630354 7.389486794 14.888783311 10.732426256 10.829945543 12.067997178 10.903249662 4.838674493 0.005759269 10.276661593 9.506624156 8.770653983 TCGA-GM-A2DH 58 0 NA 2193 breast stage i t1c n0 (i+) m0 female 2007 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 4 3 1 1 2 4 1 2 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 3.017137e-06 6.589149e-07 9.34579439252336 34.5794392523364 7.47663551401869 29.9065420560748 18.6915887850467 10.0040208 9.8924765 12.2088527 9.7780214 8.6662528 10.2162242 10.2453389 10.5546289 9.4648506 13.5831404 12.5732053 11.1609429 -0.9392608 12.5236591 2.8681336 8.2256803 7.1666823 8.5068229 8.8256451 12.7805900 2.9676666 13.7333921 7.4891335 9.4750729 11.3944878 5.5999337 NA 11.9822425 11.6998880 1.3827226 7.1823069 6.4050700 -0.9392608 3.3086958 11.8404928 10.4031259 9.0726994 10.6611510 10.9963068 11.2817563 3.3826949 10.4144716 14.4875132 7.0051338 10.4849397 11.0595401 11.7694263 5.1051668 3.7886961 10.2325757 12.3783273 NA 11.2885398 5.4006233 7.6153626 5.5202054 8.7886939 12.2693126 9.7234418 11.2433229 13.1776047 7.5324487 10.9166152 10.4905228 11.9224419 11.7427804 5.5283775 12.4074949 10.1204559 0.3827226 10.4762511 9.1375891 4.0857985 5.6382013 9.4034037 9.7793063 10.2082963 9.6023541 4.0831453 7.2775190 13.1604911 12.3530951 10.6213451 10.2012837 0.128150 0.207630 -0.110240 0.889660 -0.218120 0.337070 0.024548 0.329310 -0.080940 -0.080940 -0.208210 0.222770 0.222770 0.105120 0.105120 0.105120 0.076566 0.169110 -0.336990 -0.121480 -0.121080 0.091155 0.091155 0.071248 -0.154520 -0.154520 -0.154520 0.060508 -0.005261 0.128150 -0.455110 -0.110240 -0.218120 -0.218120 -0.352020 -0.352020 -0.322050 0.329310 0.329310 -0.427020 -0.410800 0.165950 0.276160 0.276160 -0.121870 -0.022469 0.222770 0.308570 0.093040 0.105120 0.105120 0.105120 0.076566 0.036972 0.036972 -0.095120 -0.121480 -0.121480 -0.643870 -0.103290 -0.373350 0.071248 0.072540 -0.154520 -0.154520 -0.103030 0.437500 0.013911 -0.366460 0.223 0.223 0.105 0.105 0.000 0.000 -0.648 -0.121 -0.121 -0.158 -0.158 -0.362 0.000 -0.274 -0.274 -0.155 -0.155 0.128 0.128 0.217 0.000 0.000 0.000 0.000 0.000 -0.110 0.187 -0.218 -0.218 0.337 -0.015 0.000 0.305 0.000 0.000 0.000 0.000 0.276 0.000 -0.120 -0.120 0.223 0.223 0.105 0.105 0.000 0.000 -0.648 -0.121 -0.121 -0.158 -0.158 -0.362 0.000 -0.274 -0.274 -0.155 -0.155 0.128 0.128 0.217 0.000 0.000 0.000 0.000 0.000 -0.110 0.187 -0.218 -0.218 0.337 -0.015 0.000 0.305 0.000 0.000 0.000 0.000 0.276 0.000 -0.120 -0.120 8.3181614 -1.9389842 7.7646772 11.2621316 11.6042886 6.2801360 10.9749717 9.8514600 8.5896571 1.0607392 12.7058689 11.2817502 5.0380542 -1.9389842 4.2505978 8.8600549 5.7886935 10.8574215 11.4740047 10.9671004 9.8018189 2.0607737 9.2877876 10.0986635 7.9265065 3.8421341 4.0149712 2.1482508 11.0328557 7.7314297 7.4401516 8.9434165 8.7180920 10.4231749 10.8817501 4.3827018 9.3363160 -0.3542061 8.5181543 11.8163913 8.2206448 6.3872023 -1.9389842 7.2456487 8.3668349 6.0265566 2.4530961 0.3827226 8.0831410 5.1283676 4.0607737 10.8039248 1.2306949 7.5705487 10.3981166 9.8612689 6.3415446 10.9107649 14.2190083 8.6115202 5.7542595 5.0032874 9.4325500 4.6457362 NA -0.3542061 2.6457247 9.305595 8.721661 8.437984 12.523659 9.697851 10.791244 12.780590 8.279942 9.544085 11.217805 13.212385 9.849900 10.232576 8.096947 3.584337 8.547608 11.712274 11.6944498 12.4938372 6.7082314 12.9713665 8.7384929 7.9616401 9.6258756 9.9187544 11.3422413 8.5273597 7.6681035 12.5732053 10.0054855 -0.3542061 11.0001690 5.2702262 9.2546436 9.3849540 11.1126621 10.0337532 7.0747944 9.7158568 10.2400605 7.7937886 11.6707347 9.0726994 9.8777570 10.3886067 11.5624862 9.8335003 8.8413131 10.8837425 10.1170724 9.2787312 10.1244819 8.1075838 12.3783273 7.8139902 11.2885398 9.5979918 11.1461895 8.7886939 7.9586188 13.4643181 10.2820584 10.6639361 12.3019373 11.5631080 5.3827018 1.5968398 10.7844344 10.0876426 9.6382022 TCGA-GM-A2DI 52 0 NA 2590 breast stage i t1c n0 (i+) m0 female 2005 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 3 4 3 7 4 4 3 6 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 6.589149e-07 2.080784e-07 12 80 0 4 4 10.773791 10.166823 11.695771 10.457231 8.125528 9.782241 11.087744 10.179673 10.654234 13.532754 10.819350 10.759377 4.469359 11.914965 2.246955 9.816822 4.416894 8.519985 7.501207 12.239668 1.662023 12.627968 6.662003 8.999625 10.088268 7.775746 -0.338068 11.723375 9.239432 3.121430 8.947406 8.337960 -0.338068 5.054319 10.243204 10.694738 8.778348 12.705544 10.285885 11.468553 3.909927 10.651398 15.357966 8.061260 10.197279 11.318428 11.172273 4.054319 2.469365 9.438437 11.880264 NA 11.330445 7.598641 8.532368 4.568896 10.568143 11.614745 9.977153 12.573396 12.965642 7.513753 10.663412 10.239045 11.185075 11.671832 5.276713 12.112699 10.593480 -0.338068 10.462903 9.246966 1.621759 8.741488 9.415220 10.513753 10.486962 10.188503 3.662000 7.711852 13.112828 13.316528 9.758719 9.512190 0.02482900 0.03990200 0.00249690 0.00249690 -0.17266000 -0.01152800 0.00708260 0.00708260 0.00208050 0.00208050 0.01796300 -0.01381500 -0.01381500 -0.10442000 -0.10442000 -0.10442000 -0.10880000 0.04840400 0.00291330 0.00332990 -0.00429290 -0.15476000 -0.15476000 -0.15476000 -0.00124730 -0.00124730 -0.00124730 0.19360000 0.02482900 0.02482900 -0.00857660 0.00249690 -0.17266000 -0.16841000 0.00485790 0.00485790 0.00708260 0.00708260 0.00708260 0.91602000 -0.19837000 0.00208050 0.00000000 0.00000000 0.00000000 0.00000000 -0.01381500 -0.01381500 -0.10442000 -0.10442000 0.00069327 0.00069327 -0.19325000 -0.20261000 -0.20261000 0.00291330 0.00332990 0.00332990 -0.00429290 -0.20709000 -0.15476000 -0.15476000 -0.08943400 -0.00124730 -0.00124730 -0.02219500 0.00513590 -0.08956700 -0.08956700 0.000 0.000 -0.104 0.000 0.207 0.207 0.000 0.000 0.000 0.185 -0.207 -0.155 -0.155 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.173 -0.173 0.000 0.000 0.000 0.000 -0.011 -0.198 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.104 0.000 0.207 0.207 0.000 0.000 0.000 0.185 -0.207 -0.155 -0.155 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.000 0.000 0.000 0.000 0.000 0.000 -0.173 -0.173 0.000 0.000 0.000 0.000 -0.011 -0.198 0.000 0.000 0.000 0.000 0.000 0.000 7.7226996 NA 5.2767125 10.2702584 10.7253986 6.7662347 10.8412906 10.5905663 8.9422641 4.1855653 11.8098444 11.2343485 3.2469705 1.6620232 3.1214299 8.0457078 4.3058611 11.8225053 11.3745305 10.4693584 8.9027947 2.2469553 7.6335467 10.3423631 9.7718343 4.8714593 1.6620232 NA 11.1553586 7.2165926 7.7334662 8.0586082 8.2011624 10.5511043 9.9450919 5.5688955 8.7036628 -0.3380680 8.2088981 12.8188767 7.7912866 7.0628826 -0.3380680 1.9839330 7.9794160 NA 4.4168938 0.6620232 8.8117507 3.2613202 5.9657843 10.5786295 -0.3380680 9.1255279 10.1090868 9.3344288 7.0457083 11.2725670 14.1677531 10.2711823 5.7063979 5.7063979 10.5137526 NA -0.3380680 -0.3380680 1.6620232 11.991640 4.909931 7.738819 11.914965 10.376249 9.738819 12.239668 12.482781 9.032691 11.207451 13.591817 11.200677 9.438437 8.504354 2.246955 6.801554 11.666926 11.704689 12.315968 5.592741 13.236123 9.604518 9.084068 8.320215 8.141784 10.347129 9.467747 8.058608 10.819350 6.348503 -0.338068 11.317087 5.334429 7.417759 11.063950 11.386091 10.435967 8.432403 7.919391 12.784023 8.767912 11.465210 8.778348 10.551507 9.377966 11.081964 10.095589 11.113730 10.676721 9.813020 -0.338068 9.878689 9.039409 11.880264 9.077745 11.330445 7.298628 11.274411 10.568143 8.001853 14.267194 10.278552 10.491726 12.889469 10.838177 6.801554 2.831938 10.629950 10.616200 9.441723 TCGA-GM-A2DK 58 0 NA 2645 breast stage i t1c n0 (i-) m0 female 2005 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 1 3 4 3 1 4 4 8 6 2 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.508365e-07 2.427581e-07 14.2857142857143 23.8095238095238 4.76190476190476 19.047619047619 38.0952380952381 9.97486382 9.08148610 10.86083744 7.30115686 8.77439076 8.55252155 9.79852057 10.66982836 9.68785977 14.37522577 10.76098485 10.26753404 1.25241566 13.29028786 3.38989716 10.22910504 5.01793081 8.60112598 9.75701824 12.60774887 NA 13.43267993 2.38989716 10.08146719 10.13136826 5.15929011 -0.06960327 10.02445502 9.55709125 NA 7.66517956 7.43031538 -1.06945188 3.32279345 9.11905861 9.22164028 9.55343654 10.04746341 9.65327718 10.34621142 4.01793081 10.83133646 14.23799070 8.03409849 9.78143775 10.33986058 10.74945122 3.93047242 5.77595918 8.33773740 10.48217791 NA 10.22164041 7.01793304 5.17839595 4.81311419 10.83322162 11.37133882 10.04746341 11.52012082 12.23596147 8.62046765 10.77439076 10.17367938 10.50222228 10.07193827 2.93047242 11.27059797 10.24844755 -0.06960327 10.44567674 8.44222238 2.38989716 4.90775115 10.35987637 10.14478874 10.14782156 9.62308514 2.73781653 8.08275474 11.58957363 11.72468246 9.36405518 9.54517957 -0.00650500 -0.00650500 0.00404030 0.00777830 0.01028500 0.02188400 0.00444110 0.00444110 0.02188400 0.02188400 0.02188400 0.47204000 -0.51125000 -0.01009400 0.40928000 -0.00539920 -0.51712000 0.45615000 0.00027728 0.01698500 2.73220000 0.33254000 0.33254000 0.33254000 -0.05077600 -0.05077600 -0.05077600 3.65690000 -0.00650500 -0.00650500 -0.06826100 0.00777830 0.01028500 0.01028500 0.00444110 0.00444110 0.00444110 0.00444110 0.00833510 -0.00138580 -0.00138580 0.02188400 -0.00193990 -0.00697740 -0.00697740 -0.00697740 -0.48733000 -0.48733000 -0.01009400 -0.01009400 -0.00539920 -0.00539920 -0.51712000 0.45615000 0.42663000 0.00027728 -0.52133000 -0.52133000 -0.01574100 -0.01917700 -0.20573000 0.33254000 0.00416320 -0.05077600 -0.05077600 -0.01147300 -0.00705760 -0.53519000 -0.54492000 0.000 0.000 0.000 0.000 -0.517 -0.090 0.000 -0.481 0.447 0.000 0.000 0.127 0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.535 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.517 -0.090 0.000 -0.481 0.447 0.000 0.000 0.127 0.333 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.535 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 11.47229229 NA 6.95283791 10.18431712 11.47132420 7.43516935 10.12029426 9.10274709 9.94239574 4.95283674 11.79542958 12.50659733 7.94727808 4.21587270 3.01793972 7.59580573 3.01793972 10.47059767 11.40544306 10.12952851 9.45892372 3.51543493 8.15447131 9.94239574 6.43031538 10.31309367 1.93047242 NA 10.68033913 8.09537645 7.40214487 7.63437328 9.19138918 10.95157461 9.51449255 3.88466629 8.42432504 NA 7.55617878 11.70299044 9.06361187 9.05588325 1.25241566 4.32278624 8.47736405 6.67193729 5.38990060 -0.06960327 5.21587270 4.73782194 1.93047242 10.48025432 NA 9.31093082 10.03375748 9.92694321 6.04941077 9.42632473 11.84204893 8.68702603 2.73781653 4.21587270 10.46623107 1.93047242 NA 2.83735797 4.35673542 13.46272818 5.91915413 8.59580573 13.29028786 10.11534504 10.17721022 12.60774887 14.64664608 7.92855213 9.06746071 12.83792371 10.80621900 8.33773740 8.86416045 -0.06960327 7.04941077 13.27469622 10.9752053 11.8178807 5.1003932 13.3000670 9.6744456 5.5886817 9.1592883 8.0099546 10.2353970 6.0802163 9.9063176 10.7609848 8.0878166 0.5154097 9.6378288 6.0072852 8.0207144 9.2836165 10.4372731 10.0245474 7.4735012 10.4984257 9.7402378 4.5154349 11.9264029 9.5534365 9.9535309 9.8016049 11.0258667 9.3744492 10.7688857 10.2019328 8.0232271 -1.0694519 9.8887469 6.7993542 10.4821779 5.9191541 10.2216404 5.9304701 11.1479034 10.8332216 7.0442116 13.6735158 10.6156565 10.7798748 12.0345770 10.8207340 3.5154349 -1.0694519 10.1490330 8.2658602 9.6532772 TCGA-GM-A2DL 50 0 NA 3519 breast stage i t1c n0 (i-) m0 female 2003 NA yes infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 2 4 3 6 4 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.144431e-06 1.733986e-07 18.4210526315789 42.1052631578947 5.26315789473684 26.3157894736842 7.89473684210526 9.58156460 9.44972829 11.22903622 8.49941541 8.60619643 9.13966032 9.98926349 10.09560524 10.54926399 11.81795827 11.46880200 10.32331343 NA 11.78847373 3.55830437 9.98926349 6.69581291 8.31746507 7.34908126 12.83815186 0.49937395 13.11020964 7.04373601 9.44680892 10.27968184 5.46904264 1.49942497 12.20893014 10.10365984 2.91444972 7.57623112 6.91445330 -0.08558856 4.46903938 9.29057830 10.70886886 9.07179994 10.49376890 9.81531973 11.45748477 3.08437046 10.90207230 15.45264190 8.26746744 9.65170040 10.74139864 10.35480310 3.37388481 3.82134286 8.85550048 11.88563724 NA 12.17654780 6.18123974 6.30677078 6.25430303 10.04180246 11.60793991 10.44534692 12.09187253 12.71999534 7.88023737 10.74852891 9.15967283 11.37848811 10.87951571 2.91444972 12.06006674 11.46086515 -1.08558856 10.59085086 8.82584508 3.16767906 5.64237234 10.44046308 10.06546945 10.13664411 9.43703460 4.89173511 9.40530381 13.45941740 12.70500511 9.48335912 9.91656472 0.00777830 0.00666530 0.00069327 0.00069327 -0.01684100 -0.00097017 0.01237600 -0.00152430 0.00889200 0.00889200 -0.00857660 0.01218900 0.01218900 1.52320000 1.67870000 -0.00650500 0.02553100 0.00000000 -0.54885000 0.01042400 0.02539000 -0.51506000 -0.51506000 0.00499690 0.01265500 0.01265500 0.01265500 0.02932500 0.04670000 0.00777830 -0.00166290 0.00069327 -0.54189000 -0.01684100 -0.00097017 -0.00097017 0.01237600 -0.00152430 -0.00152430 0.52083000 0.52625000 0.00889200 0.01237600 0.01237600 0.01237600 0.01237600 0.01218900 0.03834700 -0.53073000 0.05979400 -0.53652000 -0.53612000 0.00346870 0.00000000 0.00833510 -0.53946000 0.01042400 0.01042400 0.02539000 -0.52986000 -0.51506000 -0.51506000 -0.54068000 0.02511000 0.01265500 0.02932500 -0.52409000 -0.51630000 -0.51630000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 -0.515 0.000 -0.530 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 -0.520 -0.516 0.000 0.000 0.000 0.000 -0.525 0.000 0.000 0.000 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.541 0.000 0.000 0.000 0.000 -0.515 0.000 -0.530 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 -0.520 -0.516 0.000 0.000 0.000 0.000 -0.525 0.000 0.000 0.000 0.000 0.000 0.521 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.98188746 -0.08558856 5.55831050 11.40980836 10.89815914 6.26264926 11.02884600 9.16425380 8.50948644 2.08437046 12.60007781 11.72797966 3.30677261 3.77243467 3.77243467 7.75365668 3.86864726 10.92812460 11.17684147 10.51622380 9.29491408 7.32384380 7.85403244 9.99460433 6.28077448 8.75208087 -0.08558856 NA 10.84924956 7.19057733 8.07179967 9.27639663 5.27200452 10.00631808 9.68841625 3.08437046 9.20792457 0.91448799 7.57266461 12.19565856 7.81833484 7.52178337 -1.08558856 -1.08558856 7.74100174 1.49942497 3.86864726 NA 4.43801334 4.12390618 1.49942497 10.76190189 -1.08558856 7.06927145 10.17419629 10.07810263 4.19985292 9.12024617 12.00572306 8.87155507 1.23640077 5.45361305 9.40830851 3.43801334 -1.08558856 2.08437046 2.61489827 13.808198 5.123906 8.954743 11.788474 10.002579 10.417782 12.838152 11.954914 8.803470 10.184164 13.209289 9.924981 8.855500 8.852562 0.914488 6.741002 11.088442 11.3787434 12.8966444 5.8451914 13.4580268 9.3344132 4.6423723 9.0045654 7.5152204 10.3804631 6.5365052 7.0177404 11.4688020 7.3615359 2.0843705 10.7370238 5.7599441 7.1906702 11.4795551 10.3496024 10.6312725 6.2807745 9.3259640 10.0091905 4.9368217 11.9245737 9.0717999 10.5059754 9.9492520 10.5650560 9.7993865 10.7254262 10.2747514 8.3217207 NA 9.1328950 8.2196710 11.8856372 3.8686473 12.1765478 8.5780111 10.7809591 10.0418025 7.0943617 14.3698123 10.7413986 10.2487262 11.9497676 11.4968302 0.4993739 NA 9.6875921 10.0806161 9.2927479 TCGA-GM-A2DM 57 0 NA 3226 breast stage iia t2 n0 (i-) m0 female 2004 NA yes infiltrating ductal carcinoma 0 white hispanic or latino NA NA 3 5 2 2 4 1 3 4 6 1 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 3.467973e-08 17.6470588235294 11.7647058823529 0 23.5294117647059 47.0588235294118 10.3146790 9.8094720 11.7887856 9.8414785 8.2764655 8.9092565 10.9684291 10.0359487 10.0364805 12.8084603 12.0483960 10.7291682 3.2157718 12.0356826 2.3312466 9.9167873 8.2546885 8.1563278 10.0518200 13.2923626 2.0902437 14.8285998 0.9527063 9.7928523 10.7324546 7.5436962 NA 8.8144424 13.6278984 3.4887849 7.2157698 7.0861341 -1.3692218 2.3312466 9.8481591 10.3790000 11.5214515 10.3325468 9.9138954 11.4262381 5.0231267 10.7906785 15.2922652 7.6733691 10.4138054 11.7212504 11.3699549 3.4381598 1.6308248 8.9883592 11.1482305 -1.3692218 11.1913788 3.8787351 5.6531747 5.5376968 10.6251606 11.8180045 10.5526481 12.0793107 12.7114581 7.7703586 10.8557133 11.0364007 10.7966563 11.0327533 6.7030744 12.6529148 11.5877277 NA 10.6796346 8.9706573 3.0009735 5.5965923 10.5766167 10.2385998 10.6738345 9.5755192 0.2157407 4.7393297 13.9142935 12.2675450 9.9894584 9.5103903 0.00319100 0.00319100 0.00513590 0.00097064 -0.00138580 -0.00241250 0.00319100 0.00319100 -0.00263220 -0.00263220 -0.00263220 -0.00456950 -0.00263220 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00041593 -0.00138580 0.00055459 -0.00360110 -0.00360110 -0.00360110 -0.00069303 -0.00069303 -0.00069303 -0.00097017 -0.00263220 0.00319100 -0.01153400 0.00513590 -0.00138580 -0.00678130 -0.00241250 -0.00241250 0.00319100 0.00319100 0.00319100 -0.00166290 -0.00166290 -0.00263220 -0.00041585 -0.00041585 -0.00041585 -0.00041585 -0.00263220 -0.00376010 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00208050 0.00041593 -0.00138580 -0.00138580 0.00055459 0.00027728 -0.00360110 -0.00360110 0.00000000 -0.00069303 -0.00069303 -0.00097017 -0.00912860 0.00104620 0.00104620 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.7156154 NA 3.8402618 10.7373701 11.3034535 8.0689755 11.3318970 7.8603713 9.0710534 NA 12.3270140 11.7958178 0.6307782 1.6308248 1.2157407 8.4006451 4.1853988 9.9138954 11.3669977 10.4227839 9.5556197 -1.3692218 7.7156154 10.3290777 5.1386015 8.2362864 3.8402618 NA 10.3403218 5.0737517 9.8457334 8.1004489 4.7600879 10.6115322 10.2827558 6.1065410 8.3856946 0.2157407 7.6995856 13.2216281 8.2232642 7.6392358 0.6307782 1.6308248 8.2619844 6.4762974 3.0902437 NA 3.1543726 5.4398359 2.4381598 10.0460207 -0.3692218 8.3773216 10.4802122 9.6745180 3.7600932 8.5689164 11.9254279 8.4668575 0.9527063 1.6308248 11.6141571 2.8007239 -1.3692218 1.2157407 0.9527063 14.228059 4.023122 8.593703 12.035683 10.377741 10.212949 13.292363 13.028281 9.258997 10.619492 12.855939 12.181434 8.988359 8.108565 1.800745 7.704949 11.119902 11.0150513 12.3262530 7.1266621 13.4931040 9.1034979 3.9162091 8.8475529 8.0401982 10.3552954 6.4573563 3.7600932 12.0483960 7.4605296 5.8787351 12.0625659 7.6779310 6.1196923 11.4035341 9.5965914 10.8224833 9.4224340 9.0454924 12.0756926 2.4381598 10.5210942 11.5214515 10.5714878 9.8125805 11.5220213 8.7792837 10.1935266 10.6123744 9.4284686 NA 9.5210107 6.2469154 11.1482305 1.2157407 11.1913788 5.0902395 10.7079566 10.6251606 6.9023631 14.4532784 10.2737613 10.3960932 13.2571436 10.0465489 -1.3692218 -0.3692218 10.4022966 10.2213941 9.8125805 TCGA-GM-A2DN 58 0 NA 3091 breast stage iia t2 n0 (i-) m0 female 2004 NA no infiltrating ductal carcinoma 0 white not hispanic or latino NA NA 3 3 2 2 4 4 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.040392e-07 26.3157894736842 10.5263157894737 0 36.8421052631579 26.3157894736842 10.4071473 9.3396233 11.5173513 8.5795743 8.9873214 9.8499825 10.2183019 9.5254899 10.7744898 12.5448929 11.3451944 10.2574642 2.4327457 12.6658388 3.4833644 9.7681231 7.4197934 8.8565989 10.3052976 12.5518591 4.4067407 13.7147455 6.0262578 9.3135669 10.7194555 5.9473061 0.6253640 11.5498192 9.6324051 0.9473295 8.6505172 7.8685516 NA 6.4391593 9.6083715 9.8691469 8.8685519 11.1457509 10.2131553 10.7833562 4.5561167 10.4995907 15.0047392 7.5645748 10.3197357 10.4911110 11.1036418 4.6026588 5.2547339 8.4050972 11.8746394 1.2103265 11.2962553 6.1331730 7.4582680 4.8921627 9.3118784 12.0801912 10.6278413 12.8220568 12.8150479 7.8421234 10.9481510 10.8306273 11.3999590 10.5288831 4.0516418 12.0098918 11.5211424 NA 10.3013349 9.1192332 2.5351572 6.3869282 10.3706319 10.0241214 10.2173675 9.6281929 5.1172296 9.8980076 13.4055074 12.7022769 10.0230524 9.8697416 0.74385000 0.74385000 0.00000000 0.00000000 -0.00040505 0.06694500 -0.00332430 -0.00332430 0.00833510 0.00833510 0.00833510 -0.00469600 0.00194180 -0.00360110 -0.00360110 -0.00360110 -0.00152430 -0.00152430 -0.02589300 -0.00269660 0.00332990 -0.05361100 -0.05361100 -0.05361100 -0.00152430 -0.00152430 -0.00152430 -0.00069303 -0.00664320 -0.00664320 0.00083195 0.00000000 0.00750000 -0.00040505 0.06694500 0.06694500 -0.00332430 -0.00332430 -0.00332430 0.00055459 0.00055459 0.00833510 -0.00512270 -0.00512270 -0.00512270 -0.00512270 0.00194180 -0.00304750 -0.00360110 -0.00360110 -0.00360110 -0.00360110 -0.00152430 -0.00152430 -0.00152430 -0.02589300 -0.00269660 0.00000000 0.00332990 -0.35826000 -0.05361100 -0.05361100 0.00180300 -0.00152430 -0.00152430 -0.00069303 0.00249690 0.01586600 0.01586600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.071 -0.348 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.744 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.071 -0.348 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.744 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6211449 4.8733063 6.4132810 10.7482058 11.7907559 7.1267767 11.6634394 9.0799341 8.9857201 1.2103265 12.0297211 11.1351948 3.6253757 1.2103265 2.0848126 7.5262449 3.9829297 11.8990277 11.1919076 10.9927926 9.4471518 6.1011122 8.4034548 10.5627516 8.4230394 5.0004192 2.0848126 0.2103889 11.0952739 5.8250504 7.1722725 7.7365136 6.2907138 10.2727283 10.5148818 5.4197950 9.1232296 2.0848126 7.5561152 12.7852491 8.3968672 7.9015023 NA 4.0176993 8.5737449 2.4327457 4.9652256 -0.3746360 7.5649573 4.9102242 4.0848126 10.6030155 NA 8.8968410 10.4395597 9.7520822 6.5853802 10.2818027 13.6938202 8.2159649 5.0848084 5.3802654 11.9432144 2.3258181 NA 2.3258181 2.0848126 12.617347 6.919999 8.612642 12.665839 10.449541 11.111459 12.551859 11.529824 9.229931 10.371052 13.543682 10.180926 8.405097 8.495742 -1.374449 7.413280 10.975488 10.9240132 12.2504016 6.5678922 14.4999966 9.1713077 7.9982429 9.0837843 9.0176951 10.0395926 7.8493795 6.5678922 11.3451944 9.1885740 1.9472921 10.7335755 7.4327323 7.5973524 12.5680756 10.4899509 10.6701134 8.7021935 8.7610871 11.3417686 7.9652279 11.8126494 8.8685519 10.6934843 10.0107010 10.6911305 9.8762683 10.4407611 10.4282980 8.4050972 5.1952334 9.7378954 8.8529938 11.8746394 9.7181349 11.2962553 7.3769215 11.1167925 9.3118784 7.2437633 14.1960340 10.1582208 10.8059086 13.0358291 10.8136575 1.4327457 0.2103889 10.1794869 10.2303942 9.3013348 TCGA-GM-A2DO 54 0 NA 2596 breast stage i t1c n0 (i-) m0 female 2006 NA yes infiltrating lobular carcinoma 0 black or african american not hispanic or latino NA NA 3 3 1 2 1 4 1 8 6 2 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 2.184823e-06 9.363527e-07 7.77777777777778 67.7777777777778 5.55555555555556 13.3333333333333 5.55555555555556 11.1700088 9.1115259 11.1835035 7.6705869 9.0160185 10.1217578 9.5881243 10.3737044 9.1669240 12.1160113 11.0816983 10.3949521 1.5620836 12.1868576 0.9770967 8.5620623 7.4200427 9.3629621 6.9657843 11.3618834 1.7298355 13.2275461 1.9770967 10.3379466 10.3324507 3.1470299 2.2990395 14.0594982 9.7731392 2.7844621 8.2532240 6.4033649 -0.0228300 5.8839898 9.2202736 9.6317357 10.2415422 11.9022831 9.8131500 10.4169305 10.5611226 10.4283108 14.1449097 7.5055146 9.5026204 10.8635583 10.2131138 5.3346505 -0.0228300 8.1914185 11.4923066 NA 10.8115707 7.0214942 9.0160185 4.3694176 10.0738147 12.3461516 10.2119170 11.4809253 13.2942295 7.7185664 10.6415468 10.3618834 10.8474643 10.0790753 3.8839922 11.5601823 10.7788080 1.5620836 10.2590296 9.1594940 4.8680348 8.4241827 10.7666333 10.4578898 11.0452061 10.4918136 0.9770967 6.9543790 12.4370434 12.5381488 9.6046335 9.9078369 0.00000000 0.00000000 -0.00539920 -0.00083160 -0.00332430 0.02595200 -0.00332430 -0.00332430 1.58930000 -0.01945200 0.34762000 0.00152550 -0.00758260 -0.00429290 1.69250000 -0.15733000 0.00332990 0.00332990 -0.01270100 0.00027728 0.00527490 0.01063500 0.01063500 0.13243000 -0.00041585 -0.00041585 -0.00041585 0.02567100 0.00000000 0.00000000 0.00166420 -0.00083160 -0.00802440 -0.00332430 0.02595200 0.02595200 -0.00332430 -0.00332430 -0.00332430 0.00041593 -0.00134180 -0.21169000 -0.00346270 -0.00346270 -0.00346270 -0.00346270 -0.00758260 -0.00758260 -0.00429290 -0.19715000 -0.15733000 -0.15733000 0.00332990 -0.00166290 -0.00166290 -0.00490800 0.00027728 0.00027728 0.00527490 -0.19843000 0.01063500 0.01063500 0.00235810 -0.00041585 -0.00041585 0.02567100 -0.02876500 0.02230400 0.02230400 0.000 0.000 -0.157 -0.157 0.000 0.000 0.000 0.000 0.000 -0.004 -0.188 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.348 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 0.000 0.000 0.000 0.000 0.000 -0.004 -0.188 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.149 0.348 0.000 0.000 0.000 0.000 8.9078371 NA 4.5620592 10.7682625 11.1236683 9.3434218 9.7269689 8.8325600 10.1604744 0.9770967 12.7454907 11.5929177 5.8099906 3.2990248 3.7844516 8.2625018 3.9770967 12.0008540 10.4169305 10.2659657 9.3147214 1.5620836 8.8036481 10.8170907 9.9952998 6.2625027 1.9770967 NA 11.1407493 5.3694176 6.9883268 7.0645628 5.9770990 11.4257115 9.9457664 6.3521388 9.2226522 NA 7.0214942 12.2567102 10.4957527 6.8597422 NA 0.9770967 8.5045767 NA 3.7844516 2.2990395 9.9529475 6.9771001 5.8350802 10.5123750 NA 7.1669243 10.3553945 9.4344804 8.3737043 12.0204687 13.8631772 8.1520252 7.4283108 6.7972789 13.5050652 -0.0228300 NA NA NA 13.9380219 6.3864902 9.5825791 12.1868576 11.0559175 9.8428329 11.3618834 11.4923066 9.2740158 10.1495271 12.8555337 9.2717203 8.1914185 8.3258276 0.9770967 7.8779663 10.6939191 10.745284 12.396796 5.931295 12.729060 8.698199 9.498700 9.083008 8.577013 9.776235 10.284300 7.937101 11.081698 6.988327 2.562059 11.229765 4.225028 8.884381 8.531688 11.813150 10.080387 8.898941 9.763369 10.220274 9.388611 12.469151 10.241542 11.012586 8.886993 10.947924 9.430370 10.412770 10.413811 6.403365 NA 10.087139 7.554528 11.492307 11.103159 10.811571 5.262501 11.465442 10.073815 7.280880 14.288351 10.135709 10.589047 11.936377 11.158873 11.065888 5.758460 10.746111 8.500661 10.523994 TCGA-GM-A3NW 63 0 NA 3361 breast stage iia t2 n0 (i-) m0 female 2003 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 2 NA NA 6 4 3 8 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.629947e-06 6.935946e-07 15.9420289855072 57.9710144927536 2.89855072463768 8.69565217391304 14.4927536231884 9.972699 9.300240 10.983535 7.322062 8.690542 8.742503 10.908411 8.997424 10.554651 9.480464 11.342942 10.060193 2.371196 13.501488 3.470732 8.942133 5.332024 8.545405 7.600012 12.395937 -1.436354 14.003702 4.693119 10.341410 10.721817 7.387206 NA 9.233565 9.274645 NA 8.960443 5.947542 NA 2.885770 9.284082 9.664500 10.175785 11.114104 10.086910 10.494206 5.608233 10.590707 14.388573 7.180718 10.541118 11.265578 10.699547 4.291758 7.110733 8.296853 10.388797 -1.436354 10.410896 8.083475 5.305307 3.563841 9.497529 12.030042 10.616406 12.179008 12.420458 8.338625 10.686666 10.425887 10.641989 9.825346 4.371196 10.912290 11.686343 NA 10.203179 8.738764 3.734569 5.421819 10.123693 9.956156 10.580995 9.090337 2.733766 8.441889 11.776487 11.703070 9.303619 9.212196 0.87767000 0.87767000 -0.00249380 -0.01895000 -0.01821600 0.59080000 0.00499690 -0.02027500 3.65690000 1.60630000 -0.01752900 0.01307400 0.01302900 0.00624810 3.65690000 3.65690000 0.00000000 0.00000000 0.62351000 0.00444110 0.02567100 0.04202400 0.02919900 0.02919900 0.03115500 0.03115500 0.03115500 0.03735900 -0.32368000 -0.32368000 -0.00581400 -0.33399000 -0.01395300 -0.03288300 0.58435000 0.58435000 0.00499690 -0.02027500 -0.02027500 -0.01161100 -0.01161100 -0.67645000 0.00036918 0.01223700 0.01223700 0.01223700 0.01302900 0.01302900 0.00624810 -0.61575000 -0.64762000 -0.64762000 0.00000000 0.00000000 0.00000000 -0.65361000 0.00444110 0.01349200 0.02567100 -0.64608000 0.04202400 0.02919900 -0.01320400 0.03115500 0.03115500 0.03735900 0.00048142 0.05110300 0.05110300 0.000 0.000 0.000 0.000 0.000 0.000 -0.625 0.000 0.000 0.000 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 -0.324 0.868 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.584 0.584 0.000 0.000 0.000 0.000 -0.662 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.625 0.000 0.000 0.000 -0.628 0.000 0.000 0.000 0.000 0.000 0.000 -0.324 0.868 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.584 0.584 0.000 0.000 0.000 0.000 -0.662 0.000 0.000 0.000 0.000 0.000 9.5432633 NA 8.4061884 10.9230386 10.6339591 7.9527168 11.8167992 8.0960383 9.7529399 4.7536634 12.2883520 11.2998616 3.0232731 3.9213887 3.6931189 7.9583010 3.4218157 10.4785970 11.2452962 10.8659058 9.2300622 5.6406527 7.9323447 10.2533994 7.5063528 5.9301601 0.5638415 -0.4361585 10.3178906 5.9984663 5.4586543 8.3468364 6.7926563 10.7280726 10.4210416 4.2076977 9.0952195 NA 6.7084963 12.8515505 9.1941053 8.0026300 -0.4361585 6.0636841 9.4722308 0.8857305 4.0874034 0.8857305 4.6931189 6.6484870 3.0232731 9.7400113 0.1487389 7.4797172 10.3943534 9.9345255 5.1487999 10.9787876 12.3686750 7.9753493 3.4218157 2.9561496 10.9880044 -1.4363537 NA 1.1488040 1.1488040 14.317573 5.494576 9.016080 13.501488 10.453342 11.199330 12.395937 11.240456 11.004458 9.790250 13.265470 11.226729 8.296853 9.746232 1.148804 7.738764 10.805226 10.8303319 12.0489127 6.9561554 14.8783490 8.1986493 5.9036891 9.4556219 7.8022430 10.0526223 6.8721774 7.4945756 11.3429419 7.6486466 0.5638415 10.7390758 4.8676198 7.1368035 10.4148064 9.3128696 11.0461419 7.9095979 9.3927680 11.6819681 4.6082297 11.3103021 10.1757851 10.8506847 9.2450766 11.3406824 9.3237263 9.9086888 10.3517407 7.5238403 -1.4363537 9.0225626 6.9421767 10.3887969 5.5411183 10.4108955 4.6512986 11.1251261 9.4975287 7.0834740 13.6424468 9.7293733 10.1208231 12.5528778 10.2819429 2.8117587 0.1487389 9.9609780 9.6359707 9.3998884 TCGA-GM-A3NY 72 0 NA 1162 breast stage iib t2 n1a m0 female 2009 NA yes infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 5 4 3 4 4 6 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.213791e-06 3.81477e-07 19.1489361702128 21.2765957446809 8.51063829787234 34.0425531914894 17.0212765957447 11.1283004 8.7625993 10.5130878 6.5747161 8.7978583 9.8712407 10.5089757 10.0202506 9.4742438 9.6494710 11.3982806 10.0269765 3.6007098 12.6733994 3.8289768 9.1296400 7.9612766 9.2246454 10.9816983 13.3431414 1.2787579 14.6703724 7.3137791 11.0067405 10.4633048 7.0144602 -1.5286564 8.1666572 9.5219576 0.4714476 6.3601711 6.8765697 -0.5286564 4.8637452 8.9018812 9.8223678 10.6912022 12.3489046 10.0824535 10.5622027 12.8443617 11.2783810 13.7328993 7.7233135 10.4622417 11.8962511 10.6309847 5.2658457 0.4714476 7.6186336 12.2095209 NA 10.7425999 3.7933549 5.1438546 3.6808869 10.6550640 12.0868284 10.8084930 12.0341481 13.0914193 8.3433341 10.6902946 10.4165066 10.8666951 9.9925383 1.9308509 11.4569149 10.3180943 -0.5286564 9.9380151 8.3417932 4.7777616 3.4256204 11.2431245 10.2916076 9.8610601 9.5062276 1.9308509 10.2023233 13.6374615 11.8650873 9.7803365 10.4554910 1.1703000 1.1919000 0.0041632 -0.0070953 -0.0090365 -0.0016629 0.0024356 -0.0078863 -0.0013858 -0.0013858 -0.0013858 0.0125160 0.0125160 0.0108420 0.0072616 0.0072616 0.0037465 0.0037465 -0.0031859 0.0081959 0.0165650 0.0227250 0.0227250 0.0227250 0.0310140 0.0310140 0.0310140 0.0171240 0.0379240 -0.6972100 0.0148880 -0.6707600 0.0086135 -0.0090365 -0.0016629 -0.0016629 0.0024356 -0.0078863 -0.0078863 0.0000000 0.0000000 -0.0013858 0.0118180 0.0118180 0.0118180 0.0118180 0.0125160 0.0195030 0.0108420 0.0072616 0.0072616 0.0072616 0.0037465 -0.6819500 -0.6819500 -0.0011311 0.0081959 0.0081959 0.0165650 -0.6759100 0.0227250 0.0227250 0.0094491 0.0310140 0.0310140 0.0171240 0.0088920 -0.6587300 -0.6587300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.014 -0.676 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.177 0.000 0.000 0.000 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.014 -0.676 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.177 0.000 0.000 0.000 -0.659 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 10.0778339 2.3783174 6.2658438 10.5331374 10.8629408 8.5098538 11.8944132 6.6586328 9.8813499 1.0563754 11.2862114 11.3264684 4.3783174 2.6413611 2.7933549 8.3525427 4.2527865 10.0948529 11.4638360 11.8070982 9.8184964 2.6413611 9.3616929 9.7323482 6.2852098 6.1007843 1.7933549 -1.5286564 10.4117423 6.4080664 7.6905973 7.2363003 10.0573302 11.4448516 10.5175295 3.9632799 8.5734044 NA 7.6587806 11.6284598 10.0516872 9.2527884 -1.5286564 1.9308509 9.2650320 2.3783174 5.2396119 NA 4.6808813 4.8976954 2.7933549 10.0427073 0.4714476 7.6135361 10.4382946 8.5428910 5.7568312 9.9657843 11.1107694 6.2196216 4.8976954 2.7193587 10.8505362 3.5158260 NA 2.5588799 0.4714476 12.251547 5.738214 8.895595 12.673399 11.062568 11.193809 13.343141 12.319269 8.706988 9.955748 13.470548 9.180512 7.618634 9.480557 1.641361 7.323177 10.568802 10.910221 12.693318 4.471428 12.890000 8.294796 5.460113 8.134987 7.360172 10.509682 6.661254 9.580606 11.398281 7.422713 2.056375 11.002566 6.846468 7.319707 10.193809 10.369274 11.249095 7.226316 10.187819 7.775209 5.671101 13.430807 10.691202 10.876038 10.389546 10.658162 9.270710 10.395870 10.263405 7.219622 NA 9.912926 6.630745 12.209521 6.185674 10.742600 5.775209 10.903971 10.655064 7.983181 13.902143 10.374181 10.943866 12.645808 11.593124 1.930851 NA 11.221926 9.236300 10.177493 TCGA-GM-A3XG 46 0 NA 1330 breast stage iiia t3 n1a m0 female 2009 NA yes infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 3 5 5 3 3 3 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-07 3.467973e-08 20 40 0 40 0 9.602982 8.547196 10.971405 6.214521 8.687374 8.842652 9.989247 9.617713 10.783384 13.485461 10.842107 10.331036 3.331032 13.477758 1.642979 10.761921 8.344960 8.999554 10.383323 12.068895 2.280422 13.180845 7.444598 10.222547 10.043859 3.517452 NA 7.774551 9.329480 3.379940 8.133051 7.430156 NA 2.996624 9.282823 9.160430 9.783100 10.984560 9.154293 10.260141 10.120063 11.259937 14.885889 6.251920 10.183861 10.259733 10.440281 6.065512 5.890906 8.433057 12.567462 NA 11.063408 5.305945 4.915999 2.996624 9.531723 12.114655 10.651720 12.367967 12.278194 9.242893 10.839923 10.620896 10.506478 10.191160 2.379954 11.311077 10.803412 NA 10.235852 8.649228 4.454676 3.116914 10.927611 9.830057 9.940660 8.677626 6.012213 9.907683 12.584761 13.091268 9.804532 10.225435 0.02806000 0.02806000 0.00069327 0.00069327 -0.00166290 0.00074331 -0.00912860 -0.00912860 0.00027728 0.00027728 -0.00249380 0.00208050 0.00208050 0.00069327 0.00069327 0.00069327 -0.00263220 -0.00263220 0.00000000 -0.00124730 -0.00207840 0.00152550 0.00152550 0.00152550 -0.00387790 -0.00290910 -0.00290910 0.00027728 0.02806000 0.02806000 -0.00027724 0.00069327 -0.00166290 -0.00166290 0.00074331 0.00074331 -0.00912860 -0.00912860 -0.05855300 -0.00207840 -0.00207840 0.00027728 -0.02520900 -0.02520900 -0.02520900 -0.02520900 0.00208050 0.00208050 0.00069327 0.00069327 0.00069327 0.00069327 -0.00263220 -0.01656700 -0.01656700 0.00000000 -0.00124730 -0.00124730 -0.00207840 -0.03449500 0.00152550 0.00152550 -0.00332430 -0.00387790 -0.00290910 0.00027728 0.01042400 -0.01216200 -0.01216200 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.7374975 NA 6.8866830 11.3306471 11.8155462 9.2318610 10.7811094 7.2414703 9.4141391 -0.5269924 12.1678480 10.9095660 4.1169136 1.0580394 2.9966238 8.3075260 3.1734953 9.7197954 11.0066279 9.8808537 9.3114709 2.5605193 8.1958623 10.7054758 5.4954234 5.2932344 1.2804219 -1.5269924 10.4985405 5.7676760 8.0655120 7.7090693 10.2892385 11.4810929 9.7386699 3.6023381 9.1392789 0.7950188 8.0748254 13.6590142 9.2988086 8.1613052 NA 1.9324770 8.1630529 0.7950188 4.3799467 -1.5269924 2.8653646 5.2552023 3.8306103 10.6212136 5.1734953 10.1083195 10.7051759 9.8872115 4.7209843 9.7966725 10.6757909 6.7491789 2.9966238 2.3799536 11.0879947 NA 1.6429788 -1.5269924 2.1734793 11.641913 4.948788 8.741012 13.477758 10.291637 10.602338 12.068895 11.604912 8.890971 9.969909 12.969846 11.479556 8.433057 8.599759 1.280422 7.687374 10.022840 10.746268 12.252569 6.544518 13.830087 8.894068 6.200975 8.857839 6.706674 10.009224 5.767676 7.421422 10.842107 6.662879 1.794977 9.806769 10.098764 6.151972 11.076217 9.951824 10.186012 8.597176 10.378066 7.152535 2.932496 12.030758 9.783100 10.500961 10.138391 10.486028 9.152535 9.700069 10.120513 7.176958 NA 9.357431 7.388934 12.567462 6.200975 11.063408 3.379940 11.081772 9.531723 6.489862 15.124947 10.506134 10.681289 12.426797 10.845376 1.642979 NA 9.591996 8.997596 9.485679 TCGA-GM-A3XL 49 0 NA 2108 breast stage iia t2 n0 (i-) m0 female 2007 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 2.080784e-06 4.855162e-07 8 34.6666666666667 6.66666666666667 22.6666666666667 28 8.368787 8.793610 10.845012 7.562187 8.803703 8.950220 7.789102 10.457759 12.693884 12.614168 10.425443 10.066551 2.054397 11.207100 1.469417 10.901450 7.155930 8.065620 5.054393 4.024018 NA 11.285213 8.559542 9.135112 10.541897 6.981183 2.639348 10.892004 10.821197 NA 8.344411 6.583172 -1.530739 5.598714 9.703049 10.188819 8.622982 8.530126 8.976233 11.863356 2.376318 8.244217 14.624703 7.816276 9.085059 9.757719 9.835752 3.791356 -1.530739 8.234302 11.301133 -1.530739 8.169869 5.250791 7.789102 5.928861 7.050630 11.967656 11.577791 10.511089 12.149789 5.726818 10.717950 10.498455 10.774922 9.634337 3.376318 12.066318 7.698248 NA 11.336322 8.687388 3.202778 5.250791 11.796561 9.675223 11.024978 9.509034 NA 7.918578 11.857178 12.241847 9.094225 8.795859 0.854820 0.758150 0.696520 0.355610 0.098386 0.634450 -0.290450 0.182680 -0.517020 -0.517020 0.786500 0.980390 0.228700 -0.101320 0.428560 0.355120 0.267650 0.064654 -0.057654 -0.495800 -0.472830 -0.486800 -0.486160 1.234000 -0.094196 -0.066654 -0.092987 0.143250 -0.645560 -0.508460 0.344530 -0.497980 -0.518050 -0.502970 -0.633200 -0.119650 -0.849390 0.182680 -1.292900 -0.521180 0.297870 -0.517020 0.360190 0.232700 0.232700 0.146460 -0.997850 -0.498190 -0.101320 -0.101320 -0.500580 -0.500580 0.196950 -0.489950 -0.489950 -0.518050 -0.478920 0.121670 -0.488580 0.050534 -0.486800 0.013911 0.973580 0.420490 -0.092987 -0.838090 -0.020001 0.450200 -0.184330 -0.307 -0.498 -0.101 -0.101 0.132 0.000 -0.518 -0.507 -0.462 -0.262 -0.262 -0.212 0.275 0.000 0.000 0.000 0.000 0.000 0.000 0.143 0.143 0.000 0.450 0.000 0.000 0.356 0.356 -0.532 -0.532 -0.117 -0.117 -0.290 -0.108 -0.384 0.110 -0.410 0.747 0.233 0.233 0.164 0.002 -0.307 -0.498 -0.101 -0.101 0.132 0.000 -0.518 -0.507 -0.462 -0.262 -0.262 -0.212 0.275 0.000 0.000 0.000 0.000 0.000 0.000 0.143 0.143 0.000 0.450 0.000 0.000 0.356 0.356 -0.532 -0.532 -0.117 -0.117 -0.290 -0.108 -0.384 0.110 -0.410 0.747 0.233 0.233 0.164 0.002 8.71617023 NA 4.05438834 10.63056164 12.43917604 8.55723737 11.42453479 9.11676241 8.74334195 0.46946925 12.37076812 11.57876261 3.82698568 -0.53053075 1.27679440 8.37632034 4.42362523 12.43006530 11.26709132 11.03643520 10.51143107 1.27679440 9.05157168 10.11823681 6.80927938 8.97623330 -1.53073915 NA 9.97275870 0.46946925 7.34901312 9.37331173 4.89569524 10.85219974 10.15724284 2.71736386 10.80677298 3.16987691 8.34594674 12.56202178 9.10242508 11.52403414 0.05436229 2.27679440 8.44384448 -0.53053075 2.79135567 2.46941715 6.06934342 3.16987691 4.71735838 11.92462856 7.51927848 6.51927770 9.99543986 9.88041111 5.42362523 10.05439227 14.16905647 7.84229502 3.51381917 4.46943018 10.06980741 NA 0.79135567 2.16986088 3.79135567 10.217992 9.798666 8.131208 11.207100 9.715577 12.137428 4.024018 5.953247 8.937035 10.618859 13.512842 12.591530 8.234302 9.070272 6.619177 8.347481 10.070272 11.1327655 11.9229577 2.7913557 14.0629362 8.2343016 8.5435713 8.0581444 4.5138255 9.8186613 7.7455540 4.3274143 10.4254428 11.5107467 -1.5307392 8.9831575 7.6764444 10.5890907 10.7012510 11.0848295 9.5648268 7.6242479 10.9326987 6.5083494 6.1836751 11.1267103 8.6229819 10.2376141 10.5415624 9.8697757 10.3184438 10.3258553 10.5694350 7.2507892 NA 9.6305240 5.6302074 11.3011329 8.5568926 8.1698694 5.3520734 11.5657842 7.0506301 8.0713122 14.1847752 10.6574004 10.5028528 12.7064903 12.0074974 4.7362152 0.7913557 9.7285845 9.2605926 9.1776515 TCGA-GM-A3XN 44 0 NA 2019 breast stage iiia t1c n2a m0 female 2007 NA yes infiltrating lobular carcinoma 5 white not hispanic or latino NA NA 2 3 4 3 4 4 4 3 3 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 3.81477e-07 1.733986e-07 31.25 18.75 0 25 25 10.20923195 9.22984216 11.51742910 8.16532409 8.59676374 9.37492232 10.51550678 9.61646412 10.73744949 9.62297152 11.29730521 10.09169904 4.05991764 12.54647415 3.09029453 10.72207422 7.27351309 8.67900569 9.17952075 12.50576859 2.96476827 13.63142785 5.53875232 10.01905108 10.21182443 8.07708114 1.09031147 9.24342060 8.64743540 2.59277993 8.57679080 7.26687928 1.09031147 5.29974286 9.07897562 9.76624796 9.92634122 10.70622697 9.49401312 10.92291720 4.77211263 9.70745214 14.73277512 8.40744708 10.27557934 10.81792778 10.47399517 5.71478128 0.09031147 8.49117046 11.95756964 -1.49451552 10.70223780 6.03670992 6.03670992 5.13468506 9.89764582 11.79390612 10.96680780 12.72457256 12.53340712 8.84517827 10.59444778 10.41361217 10.78522914 10.69946965 4.23325153 11.37723364 10.58514649 0.09031147 10.62362063 8.79419457 4.52813995 5.89764461 11.05463179 9.88578940 10.29608418 8.94308033 2.67525139 10.09731819 13.63396720 12.76028316 9.90353770 9.94827188 0.67233000 0.67586000 -0.00857660 -0.00857660 -0.01395300 0.34655000 -0.01862800 -0.37628000 -0.00788630 -0.00788630 -0.00788630 -0.00018850 0.00041593 0.00110930 0.00110930 0.00069327 -0.04495700 -0.04495700 -0.00443120 0.00305220 0.00000000 0.01140000 0.01140000 0.01140000 0.01908300 0.01908300 0.01908300 0.00958830 0.00499690 0.00499690 -0.01087400 -0.00857660 -0.01395300 -0.01395300 0.34655000 0.34655000 -0.01862800 -0.36488000 -0.37628000 0.33448000 0.33448000 -0.00788630 0.00110930 0.00110930 0.00110930 0.00110930 0.00041593 0.00041593 0.00110930 0.00110930 0.00069327 0.00069327 -0.04495700 -0.04495700 -0.04495700 -0.00443120 0.00305220 0.00305220 0.00000000 -0.34710000 0.01140000 0.01140000 -0.00055444 0.01908300 0.01908300 0.00958830 0.00555290 -0.32147000 -0.32147000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.366 0.018 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 0.000 0.000 0.000 0.000 0.347 0.347 0.000 -0.358 0.334 0.334 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.366 0.018 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.321 0.000 0.000 0.000 0.000 0.000 0.000 0.347 0.347 0.000 -0.358 0.334 0.334 0.000 0.000 0.000 0.000 0.000 0.000 8.16888669 -1.49451552 7.03280504 11.34885693 11.40014616 8.30640625 11.26625621 9.44359215 9.32600201 1.67527397 12.08252115 11.52135663 4.57141591 4.26021389 4.61385575 8.00915399 3.75325152 11.06446646 11.07755492 11.09661700 9.06757069 4.54972461 8.37260696 10.49932820 7.45661315 10.08086761 1.09031147 NA 10.66740493 6.13468506 6.87601591 7.60336078 9.23409914 11.15305885 10.64007553 4.77211263 9.18656691 -1.49451552 7.97903414 12.37877251 9.88741195 9.08464445 NA 5.83624481 8.69762128 3.96475903 6.29323068 0.09031147 5.94827144 5.09029030 3.82726013 10.52248473 NA 8.53046798 10.41971353 9.63847067 7.10895511 10.24173033 12.09052568 8.39102486 4.48260953 4.36331127 10.16799674 3.26022142 -1.49451552 2.09027759 2.96476827 12.340858 5.459523 8.394072 12.546474 10.444687 10.430141 12.505769 12.072809 8.996029 10.250162 13.540729 11.817219 8.491170 8.863980 3.312680 7.391024 10.659197 11.288531 12.234737 6.198816 13.337967 8.794183 7.028891 8.688964 7.439019 10.283451 7.494013 8.815941 11.297305 6.430141 3.897647 10.624918 6.400147 6.662624 11.093340 10.255617 10.460615 7.776792 9.551770 10.593454 6.306228 12.763558 9.926341 10.599736 10.299338 10.589472 10.711732 10.279704 10.562982 8.336636 NA 9.634277 7.162075 11.957570 7.797650 10.702238 6.914719 11.254003 9.897646 7.296491 14.341699 10.136505 10.566362 12.704694 11.239403 4.772113 -1.494516 10.182167 9.714172 9.880911 TCGA-GM-A4E0 67 0 NA 2191 breast stage iiic t3 n3a m0 female 2007 NA yes infiltrating lobular carcinoma 10 white not hispanic or latino NA NA 3 3 4 3 6 4 4 3 2 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.161568e-07 2.427581e-07 31.5789473684211 10.5263157894737 5.26315789473684 26.3157894736842 26.3157894736842 10.0926370 9.0780101 10.8369574 7.6577357 8.4093167 9.2126596 9.1166904 9.8831230 10.6292585 8.9617159 10.9059395 10.0799688 2.3617964 12.3026409 2.1394040 10.0015313 6.3873384 9.1469052 8.7442728 11.5140878 0.5544415 12.9864679 5.4370912 10.0868041 8.9273131 3.1394040 NA 11.7592943 7.6524800 4.3093363 7.7041955 7.3999384 NA 4.1394122 8.8305726 9.7455073 9.2857670 10.1792436 9.4416688 10.7231202 5.4613386 10.3849633 15.0841226 6.7197571 9.1109541 9.9765129 10.4186342 5.9294880 NA 8.2652545 11.3022215 NA 11.1557546 6.5656749 6.7736166 4.5086442 10.5459699 11.6646051 10.2635319 10.8718607 12.4089269 8.3456110 10.6225546 10.4590827 10.4643411 10.3553480 3.5544538 11.1974023 8.5544480 1.8763696 10.8831230 8.5988423 4.0780120 6.5202321 10.2729809 9.9911596 10.3068288 9.1673165 4.9807108 9.6205373 13.7859693 13.0551655 9.6232264 9.8317356 0.17860000 0.17860000 0.00388540 0.00388540 -0.00816240 0.00000000 -0.05050600 -0.05050600 0.00944910 0.00944910 -0.00367480 -0.02890100 -0.02890100 0.00930980 0.00930980 0.00930980 0.00024826 0.00024826 0.02468900 0.00944910 0.01684500 -0.05428600 -0.05428600 -0.05428600 0.02272500 0.02272500 0.02342600 0.02679500 -0.23860000 0.17860000 -0.25484000 0.00388540 -0.00816240 -0.00816240 0.00000000 0.00000000 -0.05050600 -0.05050600 -0.05050600 -0.00539920 0.00097064 0.00944910 0.26451000 0.26451000 -0.26384000 0.02974700 -0.02890100 -0.02890100 0.00930980 0.00930980 0.00930980 0.00930980 0.00024826 0.00024826 0.01922300 -0.00522280 0.00944910 0.00944910 0.01684500 -0.25688000 -0.05428600 -0.05428600 0.00736090 0.02272500 0.02342600 0.01118700 -0.27224000 -0.24192000 -0.24192000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.179 0.000 0.000 -0.272 -0.242 0.000 -0.255 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.165 -0.165 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.179 0.000 0.000 -0.272 -0.242 0.000 -0.255 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.235 0.000 0.000 0.000 8.2925402 NA 7.4492659 11.1842600 11.2242190 8.4129263 10.5395785 10.6555045 9.6946643 0.5544415 12.4174728 11.5511475 4.0138821 7.6785692 4.1983056 7.5431332 5.8942988 11.2001065 11.0128547 10.2704100 9.1783295 5.1090387 8.4248129 10.6245690 7.5544484 11.0266312 -0.4455585 NA 11.4240419 8.1280954 7.6419108 7.3809969 9.5374417 11.6730648 10.1109541 7.1617789 8.8094765 NA 8.5086445 12.3401049 9.6642787 10.2461916 2.7243665 5.4124293 8.1838046 3.3617964 6.0936067 NA 6.4733112 5.5317277 5.0138776 10.1792436 1.5544415 9.9712456 10.4278922 9.4748008 7.7442728 10.4680856 11.3517043 8.9911596 3.4613452 3.8023794 10.2197840 2.3617964 NA 0.5544415 3.8023794 12.4739949 4.4613386 8.6965552 12.3026409 10.1243037 10.0025644 11.5140878 11.1280953 8.6247300 9.9185827 13.3606956 11.4298135 8.2652545 7.7832667 -0.4455585 7.0858293 10.3698313 11.278109 11.979139 5.485185 13.358478 9.013880 7.205500 8.139411 6.754121 9.692899 8.612440 8.788068 10.905939 7.821234 1.876370 10.641248 7.835219 5.810137 10.343982 10.746124 10.122404 7.835219 9.607016 9.348864 5.461339 13.377146 9.285767 10.749820 9.941388 11.061251 10.499160 9.752893 10.607016 7.571257 NA 9.735451 7.342350 11.302221 5.763900 11.155755 5.876377 11.169618 10.545970 6.724373 14.270464 9.674686 10.780258 12.416504 10.647866 2.724367 NA 9.847920 8.647205 9.738083 TCGA-GM-A5PV 63 0 NA 412 breast stage iib t2 n1a m0 female 2011 NA no infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 1 4 2 3 3 4 3 2 2 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 1.733986e-07 23.8095238095238 23.8095238095238 4.76190476190476 19.047619047619 28.5714285714286 9.7430107 9.0024817 11.0960962 6.7628922 9.0213118 9.0268037 10.6602736 9.1365349 10.2526373 10.6574441 10.8879565 10.1889117 1.2498094 13.4406244 2.1242950 9.8050506 6.9502619 8.2960370 9.6081071 13.2780737 0.9868114 14.1178731 6.5777491 10.2294762 10.8954807 5.8347845 NA 9.7863933 9.4503122 0.6648469 7.9957768 6.6132266 NA 2.3653006 9.1385654 9.4122135 10.0235110 11.3853178 9.3032958 10.2689497 12.0066566 11.9860833 13.8786475 5.8375876 10.0052662 10.9363228 10.3765268 3.5228467 4.7092520 7.8044111 11.0614646 NA 10.4109541 6.5657266 4.9316452 4.1567121 10.0268035 11.6042553 10.8158763 11.4592757 12.2160874 8.0636032 10.7010334 10.7041696 11.2184891 9.8966810 2.9127840 11.6738136 11.5438686 1.8347921 10.0393560 8.6676747 3.1884168 4.8347870 10.8813025 9.5313661 9.6000248 9.6414239 3.9867841 9.3399346 12.8949553 12.5591092 9.7336380 9.8253616 0.11565000 0.15233000 -0.00843850 -0.00843850 -0.01188700 0.12049000 -0.07761100 -0.07761100 -0.51948000 -0.51948000 0.23814000 0.01447000 0.01447000 -0.06740300 -0.06740300 -0.06740300 -0.00863000 -0.00863000 -0.01106000 0.00208050 0.00680440 0.00930980 0.00930980 0.00930980 0.01028500 0.01028500 0.01028500 0.01460900 -0.00180140 -0.63405000 0.00000000 -0.00843850 -0.01367700 -0.01188700 0.12049000 0.12049000 -0.07761100 -0.07761100 -0.07761100 -0.00470790 -0.00470790 -0.51948000 -0.00013862 -0.00013862 -0.00013862 0.00906600 0.01447000 0.01447000 0.01392000 -0.06740300 -0.06740300 -0.06740300 -0.00863000 0.00055459 0.00055459 -0.01106000 0.00208050 0.00208050 0.00680440 -0.63026000 0.00930980 0.00930980 0.00263570 0.01028500 0.01028500 0.01460900 0.00305220 0.02440800 0.02440800 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.141 -0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.120 0.120 0.000 0.000 0.000 0.000 -0.281 0.238 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.141 -0.490 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.116 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.120 0.120 0.000 0.000 0.000 0.000 -0.281 0.238 0.000 0.000 0.000 0.000 9.6435703 NA 5.5955962 11.2290093 11.3966031 8.1042958 11.9669275 6.7312715 9.9128703 2.6648696 11.9117488 10.5511051 2.5717496 5.9594804 2.3653006 7.8422793 4.3927776 10.2146444 11.5105459 10.2684861 9.6683776 4.2498245 8.3159117 10.7000025 6.0224122 6.8546839 -1.3349711 NA 10.7333022 6.9731991 7.5837229 7.6982831 7.0827122 11.1621004 9.7615750 5.4330429 8.6029690 NA 7.5228404 12.8155591 8.4754315 7.5040634 -0.3351531 0.6648469 8.5305932 -1.3349711 3.4197411 0.9868114 4.5475054 6.6927661 1.6648469 9.9714911 2.5717496 8.9571813 10.4665682 9.5955971 4.8146068 10.0366364 11.6026014 7.4096939 2.4722018 3.1242950 11.7759955 -1.3349711 -1.3349711 0.6648469 0.6648469 12.998511 4.249825 8.972060 13.440624 10.329751 10.701033 13.278074 12.380822 9.097402 10.020211 12.742260 10.625586 7.804411 9.066806 NA 7.733638 10.897580 10.518169 12.248883 7.103652 13.767939 9.034457 5.653544 9.053953 7.340817 10.369148 6.583724 7.799286 10.887956 7.128384 1.472228 10.287369 6.804411 5.192648 9.339935 10.220408 10.504851 8.142618 9.310518 9.079545 4.392778 10.892770 10.023511 10.784449 9.952572 11.061732 8.779903 9.570247 10.138058 7.361827 NA 9.329982 6.940472 11.061465 3.522847 10.410954 1.472228 11.109616 10.026804 6.809519 14.432797 10.696906 11.101832 11.633167 10.555884 1.249809 0.249870 9.988477 9.597074 8.844769 TCGA-GM-A5PX 65 0 NA 551 breast stage iib t2 n1mi m0 female 2011 NA no infiltrating lobular carcinoma 1 white not hispanic or latino NA NA 3 1 4 3 4 4 4 3 2 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.242351e-07 2.774378e-07 34.6153846153846 7.69230769230769 7.69230769230769 23.0769230769231 26.9230769230769 9.8623776 8.9629628 10.5452866 5.9112074 9.2746870 8.9708493 9.8780396 9.5331631 10.9399018 8.1201534 11.6507459 9.7986051 1.4517518 13.1607355 2.3448569 10.0297430 7.8068112 8.0852892 10.2577489 12.8492202 0.9663566 13.9292440 6.5270625 10.2349320 9.8434786 5.8342435 NA 9.5942466 7.6833385 1.6444101 8.2256205 6.6500450 NA 3.3993078 9.4159093 9.7051159 10.1277318 11.3810332 9.5986163 9.9758967 4.8538709 10.2851167 13.8692506 5.6323089 10.2972648 10.4777053 10.0633266 4.3168481 4.7737010 7.7659530 10.1635646 NA 10.9714111 6.1201528 5.1201528 4.3723392 9.1835786 11.7345323 10.7678947 11.4765187 12.3368174 9.1728740 10.8672148 10.6152448 10.9315551 9.5905951 0.9663566 11.6165022 10.2289127 NA 10.0722564 8.7051157 2.8931098 2.2293726 10.0161965 9.6044218 9.9234501 8.6983456 3.8538759 9.8237070 12.7192303 13.9267482 9.4914771 9.7941669 1.03400000 1.03940000 0.00402430 0.00402430 0.00430210 0.00777830 -0.00352220 -0.00352220 0.00000000 0.00000000 0.00000000 0.00041593 0.00041593 0.00235810 0.00235810 0.00235810 -0.00429290 -0.00429290 0.00416320 0.00666530 -0.00415460 -0.02000100 -0.02000100 -0.02000100 -0.03819200 -0.00774820 -0.00774820 -0.00083160 -0.01257600 -0.00193990 0.00000000 0.00402430 0.00430210 0.01251600 0.00777830 -0.00207840 0.00555290 -0.00352220 -0.00352220 -0.00539920 0.00346870 0.00000000 -0.00221680 -0.00221680 -0.00221680 -0.00221680 0.00041593 0.00041593 0.00235810 0.00235810 0.00235810 0.00235810 -0.00429290 -0.00429290 -0.00429290 -0.51199000 -0.53581000 -0.53581000 -0.00415460 -0.53042000 -0.02000100 -0.02000100 0.00555290 -0.03819200 -0.00774820 -0.00083160 -0.00027724 -0.01505400 -0.01505400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.000 0.529 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.034 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.000 0.529 -0.530 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.034 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1231895 NA 8.0748725 11.0912447 10.9187980 8.2037395 11.6857368 7.3347667 9.2526747 1.6444101 12.2624612 11.2524436 3.4517782 2.8923522 -1.3554976 8.0935686 3.8538759 10.6047838 10.8215279 10.6461799 9.7529442 8.5573094 8.0811313 10.2424723 6.5513099 8.2646396 0.9663566 NA 10.7440964 7.7105089 6.8342448 7.0790484 7.7633611 10.3465925 9.8193455 4.5270641 8.5795848 NA 8.0894346 12.7649818 8.8268141 9.0324370 -1.3554976 1.4517518 8.9538961 -0.3554976 6.0281249 0.2293418 5.3858866 6.1442667 1.9663566 9.9730948 NA 7.9344387 10.5043428 9.7865269 5.1362734 9.5384798 11.0583122 8.1201534 2.5513191 3.8923522 10.4926516 1.9663566 NA 2.3448569 2.2293726 11.507845 4.527064 8.759463 13.160735 10.203797 11.259360 12.849220 10.927219 8.875641 9.804922 13.286641 9.974216 7.765953 9.610204 NA 8.183579 10.738168 10.4622030 11.6963085 6.1990087 13.3960126 8.8720358 5.6331057 8.6458281 6.8635879 9.3766212 6.4582015 7.0324370 11.6507459 8.7384976 4.6888126 9.7979719 6.8440918 5.0673246 9.9384662 10.2023621 10.2918783 7.6216995 9.1140617 7.0410250 4.8923473 11.6346072 10.1277318 10.0920198 9.7192303 10.6141661 9.2591298 9.7483633 9.6563458 7.0237987 NA 9.2751421 7.4373076 10.1635646 4.3993078 10.9714111 6.7158824 10.6073159 9.1835786 6.9931479 14.6103168 10.6373582 11.0452993 12.0225792 10.8541778 -0.3554976 2.1038669 9.8544823 9.0800900 9.2009258 TCGA-HN-A2NL 56 0 NA 79 breast stage iia t2 n0 m0 female NA NA NA infiltrating lobular carcinoma 0 NA NA NA NA 4 4 4 3 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.733986e-06 4.508365e-07 15.3846153846154 21.5384615384615 1.53846153846154 36.9230769230769 24.6153846153846 10.387318 8.341089 11.803685 8.713058 9.744334 6.958024 6.961971 10.381804 8.506967 10.997739 11.493395 10.261654 2.146720 9.329678 3.253626 9.339572 9.002777 7.983489 12.256340 7.536383 NA 6.180981 6.160517 10.961340 10.112939 3.533738 1.031254 11.319375 11.310650 2.616193 6.328914 7.325854 -1.553850 4.713058 9.537045 9.270434 9.345628 8.654505 9.778867 10.115599 1.768206 11.952454 13.348316 8.232655 10.298765 11.124651 10.153198 5.201159 NA 8.079266 10.658463 NA 9.990752 4.174191 5.703660 4.905702 9.470718 12.637407 10.318946 11.702332 12.226913 6.146710 10.306582 10.593272 10.536052 11.148011 4.768200 11.590292 9.946615 -1.553850 10.307358 9.693605 8.124220 3.575554 8.972770 11.408986 11.892708 8.746623 NA 3.575554 12.347421 10.883503 10.818320 10.780544 0.19695 0.20870 -0.61614 0.20549 -0.59828 -0.66864 0.21407 0.27237 0.15293 0.15293 0.12800 -0.56932 -0.43366 0.21960 0.21960 0.21960 1.02620 0.16685 0.93961 -0.59234 -0.61992 0.18950 -0.61786 0.88356 0.16911 0.16911 -0.64640 0.20152 0.17513 0.18995 -0.54724 -0.61614 0.21484 -0.59146 -0.60757 -0.60167 0.21407 0.27237 -0.54340 0.16400 0.19284 0.82118 -0.60738 -0.60738 0.26388 -0.65193 -0.43366 -0.27703 0.21960 0.21960 0.00000 0.00000 0.24575 0.16685 0.75752 -1.29290 -0.60526 -0.63680 -0.60535 -0.65845 0.18950 -0.61786 -0.61460 0.16911 -0.64640 -0.65064 -0.61422 -0.64537 -0.64537 -0.345 -0.209 0.220 0.000 0.167 0.167 -0.598 -0.601 -0.605 -0.628 -0.628 0.189 0.189 1.245 -0.615 0.169 0.169 -0.539 -0.539 0.202 0.202 -0.392 -0.645 0.165 -0.547 -0.363 0.253 -0.625 -0.625 -1.293 -1.293 0.272 0.272 0.178 0.178 0.153 0.153 -0.607 -0.607 -0.235 -0.235 -0.345 -0.209 0.220 0.000 0.167 0.167 -0.598 -0.601 -0.605 -0.628 -0.628 0.189 0.189 1.245 -0.615 0.169 0.169 -0.539 -0.539 0.202 0.202 -0.392 -0.645 0.165 -0.547 -0.363 0.253 -0.625 -0.625 -1.293 -1.293 0.272 0.272 0.178 0.178 0.153 0.153 -0.607 -0.607 -0.235 -0.235 8.27122956 6.82564954 4.80382115 11.36792588 12.35212792 7.41620386 8.15879800 7.49924637 7.94707290 2.53373776 11.60929151 11.13641296 7.01991759 NA 1.25362628 10.50831703 4.73167202 9.05452564 11.32297964 10.85167831 8.91794606 0.44625623 10.37367844 11.67508957 7.20782259 5.65572390 NA 2.25362628 10.61337538 7.32278805 7.77045115 8.93008680 7.51773316 11.18090004 10.43920922 1.44625623 10.14193418 2.61619300 8.06465655 12.80903663 9.32508819 7.34713766 NA 2.90569747 8.33349172 4.44626947 2.44628270 0.03125403 6.56001330 6.63174165 3.83858878 12.90838967 NA 9.13452130 11.34958787 10.50392420 4.44626947 10.09507785 12.58614196 10.02511533 5.57555437 4.27915925 9.88246194 2.83858878 0.03125403 6.45749744 8.46168612 7.586998 9.275994 7.855662 9.329678 11.142178 11.262054 7.536383 11.092154 10.166601 11.655724 12.135286 12.541173 8.079266 8.931094 7.046183 9.131896 10.401558 10.070609 11.867152 5.479693 15.301527 8.197815 6.446271 11.294307 9.149309 9.328257 6.965907 5.423551 11.493395 10.209068 4.838589 9.274407 10.825108 9.724139 12.314418 10.877507 9.344872 8.363643 10.624002 5.930087 7.240686 10.167494 9.345628 9.947113 11.252821 6.167370 11.088323 10.755463 10.384748 7.650842 -1.553850 9.327943 5.969832 10.658463 7.915913 9.990752 7.653285 10.636095 9.470718 7.406794 15.492116 10.960492 11.272819 11.759863 12.552588 5.227629 NA 10.678092 7.698937 9.115156 TCGA-HN-A2OB 45 1 1900 NA breast stage iib t2 n1 m0 female NA NA yes infiltrating lobular carcinoma 2 NA NA NA NA 3 5 4 2 3 3 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.774378e-07 3.467973e-08 20 20 10 30 20 10.2588837 9.6733918 11.8021299 8.9774139 8.3246014 9.0672216 10.5845131 9.6582179 10.6420712 10.5747637 11.5141766 10.2477226 1.8468343 13.8173536 3.9343089 9.9851150 6.5610893 8.5628053 9.4969973 12.6305577 4.5192714 12.8902978 5.9129324 9.2188594 10.4033492 4.5747615 NA 8.3762739 8.3124097 2.4318101 8.9683768 7.9709646 0.4317834 5.0947723 9.7225926 10.1065865 9.2466551 11.6308645 10.1159699 11.2662768 12.3520345 11.2372809 15.0457486 8.1910059 10.3999925 10.9136051 11.1127512 5.7775802 3.0947766 9.0623762 12.1834892 -1.1532861 11.3679528 5.6282020 5.3225772 5.6670235 10.1083505 11.8450810 10.6008956 12.7852283 12.6598227 8.5350934 10.8510637 10.6680990 11.1554667 11.2115251 5.0366660 12.0010284 12.0946224 -1.1532861 10.4789297 8.8926029 4.6213662 5.4615515 10.3738314 10.1738344 10.3072991 9.3615572 4.9965921 10.2877124 13.7735098 13.2365418 10.0774641 9.9831936 0.2045700 0.2045700 -0.0018014 -0.0058100 -0.0043782 0.1206400 -0.0020784 -0.0020784 1.1275000 0.0093098 0.0093098 0.0045800 0.0045800 -0.0521260 -0.0521260 -0.0521260 -0.0056757 -0.0056757 -0.0034627 0.0026357 0.0026357 0.0130740 0.0130740 0.0130740 0.0126550 0.0126550 0.0126550 0.0127950 0.2045700 0.2045700 0.0065262 -0.0058100 -0.0043782 -0.0031859 0.1206400 -0.0028601 -0.0020784 -0.0020784 -0.0020784 0.0000000 0.0000000 -0.1695500 0.0049969 0.0049969 0.0049969 0.0049969 0.0045800 0.0045800 -0.0521260 -0.0521260 -0.0521260 -0.0521260 -0.0056757 -0.0056757 -0.4623800 -0.0034627 0.0026357 -0.4490000 0.0026357 -0.4431200 -0.4206800 0.0130740 0.0061090 0.0126550 0.0126550 0.0127950 0.0062481 0.0234260 0.0234260 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.443 -0.443 0.000 0.000 0.000 0.000 0.000 0.000 0.205 0.205 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.000 0.000 0.000 0.000 0.000 -0.170 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.443 -0.443 0.000 0.000 0.000 0.000 0.000 0.000 0.205 0.205 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.000 0.000 0.000 0.000 0.000 -0.170 0.000 0.000 0.000 0.000 0.000 7.9156213 5.1866947 6.2218829 11.3983111 11.2817320 7.0683333 11.5034915 9.4131733 8.6924743 5.9553686 11.7937495 11.2979590 3.5472771 3.0947766 4.8241212 8.4109927 3.5472771 9.6436941 11.3271285 10.3175020 8.7893576 4.8241212 7.9553674 10.3801729 7.0900171 7.8664339 -1.1532861 NA 10.6574148 5.1506247 7.6765657 7.9021254 8.7386270 11.1070218 10.1328233 4.5747615 8.9329795 1.1687704 8.7048243 13.1084240 8.7446886 8.2413058 NA 3.4318101 8.0660117 4.6797334 6.3625435 0.8468744 4.0947681 5.8507819 3.2391536 10.1287732 1.4317834 9.5032680 10.3401983 9.5687967 4.3062768 9.9402607 11.0608587 8.8369473 1.6542064 3.8468443 11.4734649 0.8468744 NA 0.8468744 3.2391536 12.4660315 3.7537329 8.7981280 13.8173536 10.2375496 10.1749571 12.6305577 12.2167132 8.9356315 10.5148418 12.9433113 11.4698101 9.0623762 8.0804631 0.4317834 7.1414645 10.6781504 11.800676 12.163125 6.526324 13.331475 8.512179 6.213165 8.439300 7.046515 10.519176 6.759732 6.896692 11.514177 7.374321 2.934309 10.328138 8.152905 4.724830 12.367462 10.359090 9.903481 8.496100 8.896692 11.794845 5.588310 11.730706 9.246655 10.350172 10.044674 10.937617 10.697030 10.150624 10.529838 8.846843 NA 9.777144 7.784011 12.183489 6.416700 11.367953 7.673392 11.177942 10.108351 7.213165 14.265651 9.802493 10.291341 12.633215 11.451165 1.654206 -1.153286 9.969671 9.657415 9.839782 TCGA-JL-A3YW NA 0 NA 360 breast stage iib t2 n1 m0 female 2011 NA no infiltrating lobular carcinoma 3 asian not hispanic or latino NA NA 3 4 6 1 2 6 4 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 1.976745e-06 5.548757e-07 12.1621621621622 16.2162162162162 8.10810810810811 36.4864864864865 27.027027027027 9.7606122 8.6893837 10.7367504 8.7315634 8.1852040 9.4985359 9.2968302 10.2532106 11.6843394 12.7720251 10.3950433 10.0113118 0.1119661 12.8600779 3.9532559 11.9004014 3.8845491 8.6131286 6.8933149 10.5396169 NA 9.7896746 7.3724829 9.5582939 10.2287321 5.0968480 2.3343394 12.7803103 10.4529177 2.5269952 9.1798375 8.0603220 1.3343394 5.7364452 9.9353221 9.9198464 9.0337957 9.6805445 9.4978173 10.1540702 3.1708544 8.4518050 15.4278003 7.4129331 9.5562796 9.9600562 9.7677837 4.1417025 4.7168153 7.9469525 10.7100074 -1.4731299 10.4271045 5.7937789 7.2343519 6.5713871 8.8319140 11.2760238 10.6141237 12.2480916 13.3912270 8.7879120 10.1887706 9.6690994 11.0666360 10.6604558 3.5713856 10.5241719 9.7019181 0.1119661 10.9973971 8.9395622 3.1714310 6.0188456 9.6342095 10.0544695 10.2113027 8.8601478 3.2818763 6.8712880 13.5393114 12.9514868 9.9458991 9.6799111 0.1204500 0.3403400 0.0356650 -0.1896100 -0.0788100 -0.1119500 -0.0515860 -0.0515860 -0.4887900 -0.4887900 0.2276200 0.3369100 -0.2173800 -0.0194520 -0.0194520 -0.0194520 0.0000000 0.0000000 0.3225300 -0.0866510 0.0139110 -0.1595000 0.5725500 -0.1316000 0.0093098 0.2240700 0.0942010 0.5117600 -0.0437370 0.1204500 -0.0142280 0.0599370 -0.2167600 -0.0788100 -0.1570700 -0.1570700 -0.2358200 -0.0515860 -0.4153100 0.0499660 0.1984700 -0.4887900 -0.0847200 -0.0847200 -0.0847200 0.0061090 0.5142000 -0.2142900 0.0360880 -0.0194520 0.2091600 0.2091600 0.0000000 -0.1953700 -0.1953700 0.5341500 -0.0919490 0.6267900 0.0139110 0.0101460 -0.2095800 -0.1316000 -0.3594300 0.0093098 0.1401300 -0.0087146 0.0632230 -0.1998700 -0.2000000 0.123 -0.214 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.159 -0.159 -0.100 -0.359 0.000 0.000 0.000 0.120 0.000 0.512 0.000 -0.200 0.000 0.000 0.000 0.000 -0.226 -0.226 -0.157 -0.157 0.000 0.000 0.198 0.198 -0.261 0.228 0.000 0.000 0.000 0.000 0.123 -0.214 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.159 -0.159 -0.100 -0.359 0.000 0.000 0.000 0.120 0.000 0.512 0.000 -0.200 0.000 0.000 0.000 0.000 -0.226 -0.226 -0.157 -0.157 0.000 0.000 0.198 0.198 -0.261 0.228 0.000 0.000 0.000 0.000 8.3181555 6.7653968 7.0067726 10.9582288 11.3960078 8.1905684 10.3543351 9.0466878 9.3358682 0.5269702 13.3752730 12.6742967 1.5269702 -0.4729297 3.9864200 7.5465835 4.5269952 11.7420704 11.3284987 9.9469526 9.0037386 4.1417025 8.6754691 10.6900131 7.4547706 11.9084002 7.6223894 0.5269702 11.2388744 1.1119661 6.7315634 8.2169902 9.4920553 10.5211620 9.2793731 2.8489183 9.8398754 2.1119661 8.5590382 12.3329378 9.7790665 10.8435568 -0.4729297 6.3973563 7.8801394 0.5269702 3.1119494 4.4096353 6.2480908 2.7017265 2.6969063 10.8651717 2.4338942 9.7297285 10.6361702 9.5170963 7.5493604 10.6649442 13.5466700 9.2204794 3.4811827 6.2134931 9.1985334 3.3849754 NA 1.9864109 4.1119577 11.792934 8.283549 8.286881 12.860078 10.402358 11.191217 10.539617 9.770166 8.356255 10.323438 13.243115 10.999176 7.946952 9.852298 1.111966 8.318155 10.930004 11.159079 12.091499 4.334347 13.795132 9.836469 7.174450 8.106309 8.605437 9.370191 8.104421 7.134323 10.395043 10.181628 -1.473130 9.745556 7.418776 8.847477 11.292900 10.817011 10.672606 7.207739 9.981292 8.119450 7.018846 10.584229 9.033796 10.463998 9.512834 9.941149 10.646258 9.235214 10.057399 8.358300 6.170848 10.234925 7.212477 10.710007 7.518514 10.427105 8.303426 11.056667 8.831914 7.557660 13.685129 10.504988 10.764800 12.663503 11.310605 3.433881 -1.473130 9.279373 9.849484 9.486270 TCGA-JL-A3YX NA 0 NA 352 breast stage iia t2 n0 m0 female 2011 NA no infiltrating lobular carcinoma 0 asian not hispanic or latino NA NA 5 1 4 3 4 2 4 3 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 7.629541e-07 1.733986e-07 28.5714285714286 42.8571428571429 0 14.2857142857143 14.2857142857143 10.0675521 8.8919954 11.3691019 8.0076171 8.7235978 8.2292654 10.4462240 9.2292654 10.6308406 12.8718108 11.3150633 10.0270173 3.8324749 12.8700215 2.4788424 9.5615780 6.4937882 8.0704639 8.2558189 12.5916390 7.1098129 14.4143914 4.5568402 10.3480509 11.0894523 3.8938767 1.7683326 9.0646264 10.9626533 2.8324647 8.2732534 6.0902712 -0.1060942 3.6664612 9.2374308 9.7288727 9.8480714 10.9622055 9.4246066 10.5847461 3.1162649 11.5973461 14.4223292 7.8964838 10.6809614 10.6183889 10.0845229 4.9382670 2.8938670 7.7161802 10.1703873 -1.6910567 10.0482712 5.0368330 3.8007653 4.1162649 10.5256584 11.9340506 10.8959868 10.8354118 11.6974681 8.2790185 10.7336037 10.2790724 9.9391797 10.3253727 4.0093561 10.7132558 11.2201173 -0.1060942 10.2790184 9.4535709 4.7039755 3.3533092 11.8366339 10.3236305 10.5940258 9.3312804 1.8938670 9.5686558 12.7224744 12.6144756 9.8519444 9.0136808 1.0728000 0.3891000 -0.3457600 -0.3586200 -0.3611700 0.0377320 0.0273070 0.0070335 0.7248300 0.7248300 0.7248300 0.0134430 -0.3377200 0.0000000 0.0024478 0.0024478 0.0119080 0.0100960 0.7011300 -0.3454200 0.0353330 0.0322310 0.0322310 0.0322310 -0.0471720 -0.0471720 -0.0471720 -0.3364500 -0.3325300 -0.3510300 -0.7167800 -0.3457600 -0.3611700 -0.3696000 0.0212740 0.0212740 0.0273070 0.0070335 0.0053647 0.0080075 0.0149790 -0.7274100 -0.1239900 -0.1239900 -0.1239900 -0.1239900 -0.3377200 -0.3377200 0.0146990 0.0024478 0.0024478 0.0024478 0.0119080 0.0100960 0.0100960 0.7125800 -0.3454200 -0.3454200 -0.3410600 -0.6864600 0.0322310 0.0322310 0.0242180 -0.0471720 -0.0471720 -0.3364500 -0.3414000 -0.7109900 -0.7109900 0.000 -0.338 0.000 0.000 0.000 0.000 0.701 -0.345 -0.343 0.046 -0.732 0.000 0.000 0.000 0.000 0.000 0.000 0.066 0.399 -0.336 -0.336 -0.341 -0.711 0.000 0.000 -0.359 -0.359 -0.361 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 -0.003 0.725 -0.124 -0.124 -0.121 -0.121 0.000 -0.338 0.000 0.000 0.000 0.000 0.701 -0.345 -0.343 0.046 -0.732 0.000 0.000 0.000 0.000 0.000 0.000 0.066 0.399 -0.336 -0.336 -0.341 -0.711 0.000 0.000 -0.359 -0.359 -0.361 -0.361 0.000 0.000 0.000 0.000 0.000 0.000 -0.003 0.725 -0.124 -0.124 -0.121 -0.121 8.3173412 NA 4.9527669 11.0323602 11.7760086 7.7582265 11.8193059 7.7651230 9.4209024 5.9382693 11.9349638 11.0088038 2.9527622 1.7683326 3.8007653 8.1838939 2.3089142 9.3790335 11.4681532 10.9691313 9.7071218 2.5568463 8.5873620 10.5443285 5.2396501 5.6308394 2.3963787 NA 10.2214277 5.8246126 6.1418027 8.6653647 6.4381964 10.8947412 10.3025586 0.6308714 9.8654186 NA 6.6795997 12.2670121 9.7962502 7.4095751 NA 1.3088851 8.7288729 0.6308714 3.2158028 NA 2.9527622 6.8859635 1.7683326 11.3991904 NA 6.9848696 10.7744790 9.9635485 3.7351755 9.0737841 10.4013394 7.2514275 3.6664612 2.4788424 10.8632616 2.1162649 NA 0.3089433 2.8324647 13.059658 6.438196 8.361481 12.870021 10.603246 11.327982 12.591639 11.940203 9.644861 10.201835 13.071865 12.374329 7.716180 8.603533 5.154401 7.766294 10.527476 11.3701150 12.3763469 6.3641942 13.1346634 8.9590668 4.3750047 9.6465344 9.0919108 10.4223715 5.5756996 7.1915557 11.3150633 7.0804018 0.6308714 10.1294904 6.0231577 7.1444574 11.2449983 10.1354610 10.1508700 9.1606616 10.1919376 10.0300117 4.0093561 12.1162403 9.8480714 10.4557994 10.5721818 11.3076793 10.5183660 9.7734584 10.6590230 8.2572799 3.3089142 9.9852003 6.8548808 10.1703873 4.4586576 10.0482712 5.9088249 10.9512102 10.5256584 6.9884632 14.0814076 10.4307698 10.4589771 12.7952448 11.3053861 1.1162982 -0.6910567 9.6454190 9.2455506 9.5473174 TCGA-LD-A66U 44 0 NA 646 breast stage iib t2 n1mi mx female 2012 NA yes infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 2 1 4 3 4 4 3 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.057880 8.499040 11.027140 5.821565 8.881223 8.740507 9.671948 9.296547 10.500532 12.165773 12.096518 9.969023 2.168129 13.269278 1.753091 10.323363 7.364520 7.969023 8.958200 12.487136 4.849949 13.776185 7.071000 10.560208 10.056359 8.785284 NA 12.561358 9.128125 1.753091 8.716303 6.145402 NA 3.831087 8.902832 9.243156 9.832866 9.992021 8.537357 9.635049 10.068486 11.293536 14.026266 6.749725 10.593685 9.938511 9.524208 5.090955 4.009428 7.571845 10.598575 NA 10.667304 6.966864 5.659976 4.390516 8.567579 11.994142 11.302121 12.154320 12.081137 9.428650 10.308100 10.212061 10.379200 9.716945 2.168129 11.034629 11.199020 -1.416962 10.227016 8.207042 3.910493 3.905091 10.790175 9.089964 9.946748 8.262640 3.490057 9.331353 13.376357 12.617787 9.622765 10.193724 0.93650000 0.93650000 -0.00899060 -0.00899060 0.00124810 0.37019000 -0.00788630 -0.31587000 0.00750000 0.00750000 0.00124810 -0.00083160 -0.00083160 0.00597000 0.00597000 0.00597000 0.55726000 0.54971000 -0.31677000 -0.00470790 -0.01050800 -0.00968060 -0.00968060 -0.00968060 0.00097064 0.00097064 0.00097064 0.31097000 -0.00774820 -0.00774820 0.00666530 -0.00899060 0.00124810 0.00000000 0.32814000 0.32814000 -0.00788630 -0.31587000 -0.31587000 0.00569190 0.00736090 0.00750000 -0.00763320 -0.00763320 -0.00512270 -0.00512270 -0.00083160 -0.00083160 0.00597000 0.00597000 -0.30240000 0.02216400 0.55726000 0.54971000 -0.18950000 -0.30942000 -0.00470790 -0.00470790 -0.01050800 -0.49099000 -0.00968060 -0.00968060 -0.00166290 0.00097064 0.00097064 0.31097000 -0.01666000 -0.17462000 -0.49078000 0.000 0.000 0.000 0.000 0.550 0.550 -0.309 0.000 0.000 0.496 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.937 0.311 0.311 0.000 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.328 0.328 0.000 -0.308 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.550 0.550 -0.309 0.000 0.000 0.496 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.937 0.311 0.311 0.000 -0.491 0.000 0.000 0.000 0.000 0.000 0.000 0.328 0.328 0.000 -0.308 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.595785 NA 5.896044 11.713248 11.655293 9.188584 11.478167 6.609075 9.593779 5.283600 12.020002 11.722353 3.441138 3.868558 1.168129 7.608300 4.255584 10.976551 10.630966 10.352585 9.603446 5.122321 8.359593 10.524941 8.081012 5.416049 NA NA 10.205212 5.702101 6.616583 7.715017 8.929674 11.782892 9.686448 3.338054 9.978694 NA 7.030243 12.678063 9.277518 8.001013 -1.416962 4.075011 8.791395 5.525674 5.058892 NA 6.940712 5.269662 4.811980 11.318293 1.583182 8.058894 10.851117 10.154439 6.137749 9.893773 11.603793 9.265277 3.627560 5.283600 11.827821 -1.416962 NA 1.753091 1.753091 12.927532 4.811980 8.214337 13.269278 9.982438 10.951121 12.487136 11.363700 9.206475 10.176551 13.707322 11.544791 7.571845 9.604834 3.042592 7.507973 9.745552 10.5657974 11.9270399 6.6706237 13.0626222 8.9999577 7.2484959 8.4734245 7.2052117 9.8644064 8.1923392 8.7974793 12.0965177 7.4255105 1.1681285 9.6103751 8.3579474 6.9302063 9.4380287 10.0354015 9.7674158 7.9318887 10.1111259 6.9494824 6.4223642 12.6909495 9.8328663 10.7947444 10.1091704 9.8772065 9.4680939 9.5402623 10.0477061 6.5604398 NA 9.5069631 7.7011151 10.5985753 7.2234052 10.6673042 5.5256743 10.6462182 8.5675785 7.1339067 14.6962099 10.5318925 9.5768063 12.2872801 11.2633000 4.2836033 0.4068632 9.2484962 9.0094250 9.0507659 TCGA-LD-A74U 79 0 NA 402 breast stage iiic t3 n3a m0 female 2013 NA no other, specify 11 white not hispanic or latino NA NA 3 5 1 2 3 3 4 3 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6238235 9.5063526 11.7500080 8.9459012 8.0967083 9.2861199 11.3364530 9.7065763 10.5635595 11.3980340 10.7676975 10.3247805 2.6155811 12.3771330 2.0306186 10.8070523 7.0351202 8.8119789 9.3722493 12.5166497 0.7086728 13.2087238 6.4021781 9.6937432 10.5775137 4.8379735 -0.2912389 11.9416441 10.0061806 2.5160404 8.0033121 6.9894615 -1.2912389 4.8379735 10.1788416 9.8211306 9.0272340 11.9583972 10.0678916 11.3414592 6.1349561 11.1947719 15.1733167 9.3375376 11.1739974 10.6563281 10.3086040 5.1516356 3.1681285 8.6379496 12.1604174 NA 11.0983225 6.1599016 6.7199186 6.3525467 9.8507982 11.8286049 10.5790559 12.4946544 12.8765797 7.8172158 10.2861199 10.2950619 10.6215805 11.3011482 4.9375092 11.7963197 10.6820297 0.2936059 10.5204672 8.7921705 4.4393306 6.0574199 10.4043545 9.6636145 9.9830693 9.2164857 4.0306186 9.8418334 13.6615689 12.4528943 10.0739200 9.7680356 0.12384000 0.12384000 0.00038044 0.00038044 -0.00695480 0.05220400 -0.00584940 -0.00584940 -0.00225230 -0.00225230 -0.00225230 -0.00211380 -0.00211380 -0.00072850 -0.00072850 -0.00072850 0.02381100 0.02381100 -0.27419000 0.00246140 -0.08708300 -0.27503000 -0.28064000 -0.28064000 0.02928900 0.02928900 0.02928900 0.01652900 0.12384000 0.12384000 0.00232260 0.00038044 -0.00695480 -0.00695480 0.05220400 0.05220400 -0.00584940 -0.00584940 -0.00584940 0.05206200 0.04796000 -0.00225230 0.00232260 0.00232260 0.00232260 0.00232260 -0.00211380 -0.00211380 -0.00072850 -0.00072850 -0.00072850 -0.00072850 0.02381100 -0.27395000 -0.27395000 -0.27419000 0.00440550 0.00440550 -0.08708300 -0.28516000 -0.27503000 -0.28064000 -0.29145000 0.02928900 0.02928900 0.01652900 0.05149300 0.01443400 0.01443400 0.000 0.000 0.000 0.000 0.000 0.000 -0.274 0.000 0.000 0.000 -0.285 -0.281 -0.281 -0.291 -0.291 0.000 0.000 0.124 0.124 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.274 0.000 0.000 0.000 -0.285 -0.281 -0.281 -0.291 -0.291 0.000 0.000 0.124 0.124 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 7.4056589 5.9083638 5.8379735 11.2090351 10.9065221 7.8495721 12.1870816 9.4677388 9.1091009 2.5160404 12.3599671 11.7708503 3.5666691 -0.2912389 4.3233989 8.0147531 3.6628891 11.1591292 11.2329880 10.4585606 8.9108151 6.0215730 8.2361683 10.5002611 7.1803667 7.0078996 -0.2912389 NA 11.0913152 7.9660791 7.2125168 8.2536556 8.1202021 11.2560364 10.1894814 3.4091329 9.2594380 1.0306186 8.1117032 13.1886608 9.5666721 8.0351207 -0.2912389 1.0306186 8.0033121 5.4229360 5.3234025 NA 5.3669027 5.9521518 4.1010113 10.5678377 2.2936648 9.7754531 10.7858407 9.3731383 5.9566189 10.2742692 11.9607652 9.8444004 4.2322540 4.8786175 10.0429644 -0.2912389 0.2936059 0.2936059 2.9566143 12.336098 5.697376 8.261360 12.377133 10.101009 10.557705 12.516650 12.097247 9.176011 10.346674 12.983652 10.126016 8.637950 8.785507 1.030619 7.026104 10.661432 11.3637746 12.6159574 5.9566189 13.6295524 8.5898051 6.6453284 8.4998539 7.5224725 10.6660617 7.1433189 8.6275543 10.7676975 7.1052957 -1.2912389 10.7489808 7.0261040 7.7326118 11.1632475 10.6831058 10.4685793 7.9302784 9.3934398 10.6827472 5.1516356 12.2706771 9.0272340 10.4781158 10.0607346 10.8057357 10.7865082 10.0950926 10.6035089 8.8520744 8.5272733 9.9536674 8.3383576 12.1604174 5.7086921 11.0983225 6.8985155 11.2288727 9.8507982 7.4770078 14.3607238 10.2680682 10.6679687 12.4981229 10.7615988 0.7086728 -0.2912389 9.9052933 10.1955261 10.0557588 TCGA-LD-A7W5 52 0 NA 216 breast stage iiic t2 n3a m0 female 2013 NA no infiltrating ductal carcinoma 23 black or african american not hispanic or latino NA NA 4 3 1 2 6 4 4 8 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1590075 8.8039312 11.9127857 8.4182608 8.1517066 8.9067749 11.2356252 10.4179229 10.5814095 13.9008903 10.6566926 10.5982166 1.9438838 12.2867870 2.2657969 9.3757248 6.4622045 8.7447787 11.2028375 12.6598409 -1.6411537 13.3133400 3.9135022 10.1307690 10.0471667 5.1662696 -0.6411537 10.3648918 10.2541131 3.4463753 9.4046760 6.3757241 1.5288213 5.0593553 9.6151251 9.6683927 7.6830971 10.2369674 10.0628200 10.6130593 10.8096122 12.2288958 14.6731989 9.9139801 10.9912233 10.2172861 10.2977609 5.7767699 5.4357319 8.3145665 10.5168949 -1.6411537 10.0654125 5.8101269 7.1918064 4.3131152 9.2970258 12.0842827 10.1365827 12.0087340 12.8030902 8.2491808 10.9572016 10.6406987 10.6207175 11.1951641 4.8346505 12.1107743 12.0386165 0.3589588 10.4158928 9.5406899 4.5984664 5.4141998 11.0146708 10.4631876 9.8447458 9.4523339 2.8183393 6.1138047 12.6619837 13.0460187 10.4350640 10.5228805 0.139840 0.139840 -0.163570 -0.286910 -0.070804 -0.051721 0.144690 0.139070 -0.267330 0.229310 0.650980 0.287390 3.656900 -0.123940 -0.123940 -0.123940 0.136720 0.395890 0.179660 -0.203860 -0.022332 -0.277860 -0.262400 3.650600 0.000000 0.000000 0.000000 0.137170 0.139840 0.139840 0.090575 -0.175500 -0.070804 -0.070804 -0.067592 -0.077439 0.148310 0.145780 0.139070 0.117260 -0.026441 -0.283110 -0.299220 -0.209080 -0.020412 -0.020412 -0.282990 -0.062495 -0.287030 -0.123940 -0.071739 -0.071739 0.136720 -0.292720 -0.292720 -0.286910 -0.279060 -0.279060 -0.022332 0.146770 -0.729410 -0.262400 0.218520 0.000000 0.000000 0.137170 -0.294730 -0.274280 0.108180 0.048 -0.239 -0.124 -0.124 0.137 0.396 0.146 -0.279 0.000 0.000 0.000 -0.259 -0.259 -0.077 0.219 0.000 0.000 0.140 0.140 0.137 0.137 0.581 -0.274 0.000 0.000 -0.275 -0.275 0.000 0.000 0.000 0.000 0.146 0.146 0.000 0.000 -0.137 0.146 -0.189 0.000 0.000 0.000 0.048 -0.239 -0.124 -0.124 0.137 0.396 0.146 -0.279 0.000 0.000 0.000 -0.259 -0.259 -0.077 0.219 0.000 0.000 0.140 0.140 0.137 0.137 0.581 -0.274 0.000 0.000 -0.275 -0.275 0.000 0.000 0.000 0.000 0.146 0.146 0.000 0.000 -0.137 0.146 -0.189 0.000 0.000 0.000 8.18705311 6.63504041 6.98462580 11.32108945 13.88339694 7.92780344 11.43906774 8.75877120 9.57744941 5.20440681 11.08257739 11.61609065 5.28965375 3.75123875 3.35891664 9.05153198 4.56837267 11.11505575 11.53415408 10.29702572 9.43573213 5.16626955 8.97454595 10.46056392 9.20988465 6.72960443 -0.05619117 -1.64115367 10.03355006 6.59732110 7.75123406 7.71426750 7.43573193 11.01730646 10.35785942 4.48820006 9.57262823 -1.64115367 8.21845135 11.95580503 10.01757427 8.91158553 -1.64115367 -0.64115367 8.26129151 -1.64115367 5.57808431 3.05935528 8.35185488 6.91503920 5.70764350 11.54503068 -0.64115367 7.89807530 10.88076219 9.03575503 7.48819926 11.54177631 13.28085034 8.79354479 4.83465055 5.51878690 10.60209039 0.94388383 NA 1.94388383 1.94388383 12.152758 5.635040 8.393715 12.286787 11.010865 9.891272 12.659841 12.119325 9.127101 10.663553 12.893219 10.992139 8.314566 8.803931 3.446375 9.670097 10.834903 11.63271204 11.94058779 6.62101153 12.75002240 8.92782269 8.96346979 9.08598598 7.30143126 11.12528179 9.15576719 10.14967219 10.65669255 8.30289614 4.40330863 9.57505606 8.28224379 8.31418850 9.93114289 11.56532037 9.80082307 7.55120914 9.64547417 8.84474562 8.34333498 11.91989046 7.68309708 10.44173079 10.40091774 10.40672203 10.06929240 10.02024924 10.78518123 8.35750670 -0.05619117 10.39809936 8.68329959 10.51689489 8.85776551 10.06541250 5.66269828 12.23170867 9.29702584 7.67653259 14.17129433 10.28372897 10.20753943 12.28641666 11.68492452 8.73612690 4.05935528 9.96207916 8.98188347 10.13822546 TCGA-LD-A7W6 54 0 NA 404 breast stage iib t2 n1a m0 female 2013 NA no other, specify 2 white not hispanic or latino NA NA 3 1 2 2 4 3 4 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.2746820 9.4644643 11.9065386 9.1777838 8.3654795 9.3158861 10.9742076 9.4949987 9.9657843 11.6903793 12.5050662 10.4383850 3.4029950 13.1316461 3.7249231 9.5491108 7.0509685 8.3802766 10.1507102 13.0613357 2.4029950 14.2794863 7.5556436 9.9339157 10.5671854 8.1673946 0.5955991 9.5878720 9.2011214 0.9175463 8.1073944 7.2103518 2.0550568 5.2249972 10.0023783 9.8589110 10.9515434 11.3519896 9.4473907 10.9217904 10.8647685 11.9275384 14.2381730 8.6261022 10.5285947 11.4397591 10.8778615 5.3505291 2.2960756 8.7542515 11.4658139 -0.4043054 10.5156224 5.9793463 6.0468533 4.5025343 10.4571164 12.1748399 10.5617867 12.3490675 12.8698743 8.2556376 10.7152315 10.9840062 11.4140242 11.4845753 5.0713765 11.5788135 11.7668186 0.1806571 10.1511896 9.0663007 4.8271534 4.8435668 10.7165276 10.3090284 10.4426992 9.4094230 3.1806094 8.8624285 13.6049456 12.4993354 10.1650228 9.9933164 0.51839000 0.51839000 0.00374650 0.00374650 0.00624810 0.01223700 -0.00152430 -0.52512000 1.31800000 1.07930000 0.00597000 0.00013863 0.00013863 0.01419000 1.45700000 0.00944910 -0.00643480 -0.00643480 0.01084200 0.00000000 -0.00456950 -0.01986300 -0.01986300 -0.01986300 2.07270000 -0.03435900 -0.03435900 -0.00678130 -0.00498440 -0.00498440 -0.00138580 0.00374650 0.00624810 0.00624810 0.01223700 0.01223700 -0.00152430 -0.52512000 -0.52512000 0.00541390 0.00124810 -0.52174000 -0.00235530 -0.00235530 -0.00235530 -0.02833300 0.00013863 0.00013863 0.01419000 0.01419000 -0.50256000 -0.50256000 -0.00643480 -0.00643480 -0.00643480 0.01084200 0.00000000 0.00000000 -0.00456950 -0.58892000 -0.01986300 -0.01986300 0.01181800 -0.06262900 -0.03435900 -0.00678130 -0.00193990 -0.00346270 -0.50588000 0.000 0.000 0.000 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 -0.566 0.000 0.000 0.000 0.000 0.892 0.892 0.000 0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 -0.566 0.000 0.000 0.000 0.000 0.892 0.892 0.000 0.518 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.524 0.000 0.000 -0.522 0.000 0.000 0.000 0.000 0.000 8.5614262 NA 6.4598283 11.2733614 11.1372225 8.6277152 11.3060178 8.9270514 8.9418340 3.5956469 11.3526150 10.7993477 3.5956469 1.7655772 4.2103499 8.2304528 3.3505255 10.8020458 11.3278092 11.0305306 9.5671853 3.8435719 8.4029967 10.3745403 7.0794570 6.4473907 -1.4043054 -1.4043054 10.7090584 6.6235479 6.4285310 8.2520665 7.8026559 11.4539628 10.6834361 2.0550568 9.3371087 NA 8.9028427 12.0904974 10.7596059 7.9858106 -1.4043054 5.8624291 8.4813381 -0.4043054 3.6400309 NA 5.5956409 5.7474196 3.5956469 10.0657923 NA 9.1955545 10.6420837 9.7743066 5.7555125 10.1960194 13.1195100 7.9085247 3.5025343 3.0550742 11.4265531 2.2960756 -1.4043054 3.1806094 1.4029950 14.755708 3.843572 8.419009 13.131646 10.533751 10.419805 13.061336 12.582373 9.378935 10.633144 12.989032 11.919822 8.754252 8.976103 2.595647 7.648210 10.907958 11.0087408 11.8119330 6.8050951 13.2844330 8.5942324 6.6290651 9.2707167 8.5352209 10.6705626 7.2645270 8.3047255 12.5050662 6.1578845 0.5955991 10.7213781 10.1396402 7.5947680 9.8494892 10.0134944 10.5896416 8.7171753 9.0509691 11.8169268 6.7093844 12.5223668 10.9515434 10.7434827 10.2654128 10.8035713 10.2277282 9.8577366 10.8758326 8.2431002 1.1805935 9.1290787 6.7599960 11.4658139 7.0134946 10.5156224 6.4094232 11.1091720 10.4571164 7.1730705 13.9040157 10.1876316 9.8268630 12.4355345 10.7621187 1.4029950 0.5955991 10.2746820 10.0406567 10.3175954 TCGA-LD-A9QF 73 0 NA 323 breast stage ia t1c n0 m0 female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 3 3 1 2 2 6 4 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.5812576 9.1417383 11.0882519 8.8037818 8.8836960 9.7685924 9.1945183 9.8465949 11.4649160 12.2606254 10.7111991 10.0791414 3.6697525 17.5093064 4.2912425 11.4407320 6.5913623 8.6680156 8.6904101 11.6072941 1.2912499 11.0950471 5.5391650 9.8000716 9.6185670 6.8334973 -1.0306192 9.7894898 9.1354738 3.0567743 8.8792040 8.4470692 NA 5.2547112 9.3080473 9.7107779 9.0804463 9.6176684 9.2124847 10.8303977 11.6138431 8.3594799 14.9985980 7.7169669 9.4460571 10.2249296 9.7090914 5.6417368 1.2912499 8.3573281 10.7790789 0.5542450 11.0003227 6.2547131 8.0218789 6.9749354 10.0394318 11.4140669 10.0380891 11.5582596 12.6254004 7.9264128 10.4967878 9.8761112 10.8870558 10.6412940 3.8675209 11.2101021 8.8807027 0.9693071 10.6775326 8.7175037 3.1255519 6.0137057 10.4845178 9.6086514 10.0882519 9.2266985 3.5542696 9.2523991 13.3523400 12.1059816 9.8014096 9.3976710 0.00444110 0.00444110 -0.00041585 -0.06638600 0.00000000 0.00226620 0.01544700 -0.16421000 -0.00415460 -0.00415460 -0.00415460 0.10307000 0.10307000 0.01101700 0.01101700 0.01101700 -0.07765800 -0.05725000 0.00013863 -0.06195800 0.00208050 -0.16891000 3.65690000 -0.00387790 -0.01326400 -0.01326400 -0.01326400 -0.04604100 0.00444110 0.00444110 0.00110930 -0.00041585 0.00000000 0.00000000 0.00226620 0.00226620 0.01544700 -0.16421000 -0.16421000 0.14846000 0.14697000 -0.00415460 -0.05212600 -0.10130000 0.00208050 -0.02028000 0.10307000 0.10307000 0.00161150 0.01101700 -0.00466190 -0.00466190 -0.05725000 -0.05725000 -0.05725000 0.00013863 -0.06195800 -0.06195800 0.00208050 -0.17983000 -0.16891000 0.40294000 -0.12875000 -0.03095100 -0.01326400 -0.05956800 0.03439500 -0.01147300 -0.01821600 0.103 0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.148 -0.148 -0.129 -0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.164 0.148 0.148 0.000 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.148 -0.148 -0.129 -0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.164 0.148 0.148 0.000 0.000 0.000 0.000 0.000 0.000 7.93220707 2.13924027 6.29123886 11.10084628 11.44479092 7.75659301 10.64791095 9.29095699 9.23932572 1.96930708 12.98620612 12.10853436 3.29123518 -0.03061924 3.61316622 7.42052198 4.75067081 12.40146117 11.49287274 10.09084430 8.87469770 6.02459229 7.56922372 10.84965960 8.80061813 8.06734293 6.64173676 NA 10.90078705 6.07783474 6.96366370 7.94659051 8.79426964 10.39345610 9.64614933 3.96930708 9.30693274 0.96930708 7.70402051 13.34435023 8.73914872 8.98751103 1.55429414 6.37019044 7.93509490 -1.03061924 5.17876244 1.55429414 8.05677371 4.46308619 4.90005046 10.95087808 2.87619276 9.87695261 10.60366807 9.60955571 7.80536147 10.75271832 13.57941286 9.59957797 5.29123886 5.81480162 9.80930189 0.96930708 -1.03061924 1.55429414 2.55426958 12.16157433 6.66279795 8.81166112 17.50930636 10.16959635 10.26105709 11.60729411 9.74985049 8.99859805 10.05544703 13.43181307 10.71119908 8.35732811 8.12665750 -0.03061924 7.26851861 10.50992322 11.335633 12.378834 4.013703 14.209391 9.076528 8.800618 8.443016 9.017798 10.024085 8.935095 8.293491 10.711199 7.652305 2.876193 10.032032 8.993065 7.461965 12.209655 11.012680 10.304143 8.005484 9.478096 9.195723 8.426692 10.601111 9.080446 10.527253 10.092786 9.864886 11.500692 10.445551 10.258753 8.502640 2.428732 10.194922 7.952789 10.779079 9.047462 11.000323 7.830398 11.345165 10.039432 7.134469 14.576728 10.117787 10.325212 12.292647 11.305817 3.969307 0.554245 9.981237 9.210102 9.157900 TCGA-LL-A440 61 0 NA 759 breast stage ia t1c n0 (i-) mx female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 3 4 3 3 3 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.040392e-07 1.040392e-07 0 0 33.3333333333333 66.6666666666667 0 1.014180e+01 9.421484e+00 1.148963e+01 9.411631e+00 8.319039e+00 9.084929e+00 1.025869e+01 9.818170e+00 1.105879e+01 1.164277e+01 1.058821e+01 1.017505e+01 5.000122e+00 1.262126e+01 3.170053e+00 1.137715e+01 6.022488e+00 8.822426e+00 9.821363e+00 1.099424e+01 4.248049e+00 1.218644e+01 7.238525e+00 9.934794e+00 9.992587e+00 4.700562e+00 1.442623e-04 1.258605e+01 8.263780e+00 4.874590e+00 8.430573e+00 7.440297e+00 1.415164e+00 4.369355e+00 9.756677e+00 1.028937e+01 9.491973e+00 1.066486e+01 9.739338e+00 1.140278e+01 9.743833e+00 1.031565e+01 1.510660e+01 8.957474e+00 1.013112e+01 1.126769e+01 1.083564e+01 5.763887e+00 4.772709e+00 8.952376e+00 1.160081e+01 NA 1.073652e+01 7.544441e+00 7.173381e+00 7.357673e+00 9.925922e+00 1.165580e+01 1.035032e+01 1.242569e+01 1.280962e+01 8.458185e+00 1.056332e+01 1.073599e+01 1.080021e+01 1.122754e+01 5.115599e+00 1.120265e+01 1.116858e+01 1.000144e+00 1.079427e+01 8.779292e+00 4.429516e+00 6.309975e+00 1.041481e+01 9.987858e+00 1.065027e+01 9.166702e+00 5.143079e+00 8.309976e+00 1.365461e+01 1.294946e+01 1.009376e+01 9.919977e+00 0.05751100 0.05751100 0.00000000 0.00000000 0.03622900 0.06451100 -0.06236100 -0.06236100 0.41212000 0.01572700 0.01572700 -0.06172800 -0.05846200 0.09669200 0.60214000 -0.06128600 0.12833000 0.31306000 -0.06370300 -0.05738500 -0.00069303 0.03129500 0.03129500 0.03129500 0.57987000 -0.00443120 -0.00443120 0.04968200 0.05751100 0.05751100 0.00777830 0.00000000 0.03622900 0.05224100 0.00527490 0.00527490 -0.06517900 -0.06236100 -0.06236100 0.11301000 0.10891000 -0.11508000 -0.00456950 -0.00456950 -0.00456950 -0.00456950 -0.05846200 -0.05846200 0.09669200 -0.00650500 -0.06128600 -0.06128600 0.12833000 -0.06061400 -0.06061400 -0.06370300 -0.05738500 -0.05738500 0.02132300 -0.07715500 0.03129500 0.03129500 -0.00470790 -0.00968060 -0.00443120 0.04968200 -0.00221680 -0.03354100 -0.03354100 0.000 0.000 0.000 0.000 0.128 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.109 0.109 -0.115 -0.115 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.128 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.109 0.109 -0.115 -0.115 0.000 0.000 0.000 0.000 7.9774001 NA 6.5900840 11.2168661 11.1090802 7.9439635 10.8743331 10.1188191 9.1081133 5.1155993 12.6269700 12.1962838 4.5236811 2.3220435 5.9308580 8.0999064 4.6049846 10.5963100 11.2091674 10.4077420 8.6994034 4.3458931 8.0445143 10.6340236 7.1700452 8.1379651 0.4151096 0.4151096 11.1347605 6.4319655 7.8847994 8.0644140 8.7086294 11.2450430 9.8549887 6.3340212 9.2055061 2.5026107 8.9972997 12.6815783 10.0644139 8.5825759 0.7370810 3.6246156 8.0187838 4.4151570 5.1016585 -1.5846740 5.5131907 5.9964339 3.5444359 10.1409500 0.7370810 9.9323349 10.4578431 9.3152698 5.7370864 9.9972997 11.2698314 10.8010201 4.4595497 4.5236811 11.3582220 -0.5848904 NA 0.4151096 3.4151637 13.0992428 5.4485805 8.3635250 12.6212563 10.0472442 9.8466553 10.9942379 11.8634031 8.9445882 10.9577060 13.9510406 12.1281145 8.9523761 7.5925774 -0.5848904 7.4866203 10.9707055 11.936022 11.918114 6.149867 13.423890 9.017857 6.965904 8.401000 8.241706 10.266540 7.631904 7.670186 10.588210 6.575029 3.322044 10.998711 7.282436 7.246085 11.899855 10.790197 10.223720 8.058437 9.213629 11.581792 7.098152 11.804372 9.491973 10.508245 9.978831 11.096835 10.896705 10.262215 10.623697 8.300854 4.807473 9.806654 8.261902 11.600808 5.575028 10.736522 8.847700 11.504774 9.925922 7.510661 13.820000 9.674901 10.194877 12.841422 10.786390 4.369355 -1.584674 10.059014 9.702293 10.253968 TCGA-LL-A441 62 0 NA 996 breast stage ia t1c n0 mx female 2012 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 3 1 1 5 5 4 7 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.387189e-06 6.242351e-07 15 11.6666666666667 1.66666666666667 48.3333333333333 23.3333333333333 10.07394820 8.83075445 11.37267851 9.26585551 8.58675011 9.49529403 9.54600697 10.63067876 10.53073366 13.17279534 11.17328718 10.67108191 2.42037460 11.77208421 2.50283976 9.50407948 6.55207115 9.21630959 11.54128943 8.96680593 0.65480213 10.11056892 7.98574746 9.73174244 9.83672845 7.26659354 2.42037460 10.24600529 10.75391553 2.65482503 9.06337270 6.99468041 -0.08207184 4.69045621 9.63497037 9.55630104 9.20403774 10.67414344 9.88701174 11.72843679 5.77584596 8.66940915 14.66668695 8.81335954 9.74547248 10.86914986 10.96112031 6.14025718 1.65484794 8.98485134 11.00023597 NA 10.23716095 6.32725622 8.15626969 5.16579137 10.11097978 12.06050407 10.46764987 10.96794051 13.06496405 8.04370922 10.28746248 10.48695807 11.16954480 11.08381895 5.51281156 11.72280284 8.94577126 5.59968973 10.70168195 9.34622539 6.37773458 6.34971027 11.57384304 9.45831617 11.43422179 9.30659992 3.19088346 6.84069737 13.08303387 12.22430665 10.37729676 9.72038159 0.3261200 0.7492300 0.0079548 0.0079548 -0.1673600 0.3636700 0.2063000 -0.0273610 0.0768420 0.0768420 0.1262700 0.5582000 -0.0567320 -0.0533050 -0.0533050 3.6569000 0.1504300 0.0000000 -0.2843900 -0.2178400 0.1845400 -0.1227800 -0.0270720 -0.0270720 -0.0096436 -0.0096436 -0.0681530 0.2841000 -0.2403000 0.1110000 0.0068416 0.0079548 -0.1673600 -0.2195700 -0.2844300 -0.2844300 0.2063000 -0.0273610 -0.0273610 -0.0580070 0.3960000 -0.2662100 -0.1580600 -0.1580600 -0.1580600 -0.1580600 -0.0567320 -0.0567320 -0.0533050 -0.0533050 0.1074900 0.1074900 0.1504300 0.0000000 0.0000000 -0.0872790 -0.2441400 -0.2441400 -0.2698100 0.1708000 -0.1227800 -0.0270720 -0.3255000 -0.0096436 -0.0681530 0.1670400 0.2233400 -0.0686270 -0.0686270 0.000 0.000 0.107 0.107 0.150 0.000 0.000 -0.244 -0.310 0.000 0.000 0.000 0.000 -0.168 -0.168 0.000 0.000 0.326 0.326 0.167 0.284 0.223 0.000 0.000 0.000 0.000 0.000 -0.167 -0.167 -0.284 -0.284 0.192 0.000 0.442 0.442 -0.266 0.000 -0.158 -0.158 0.000 0.000 0.000 0.000 0.107 0.107 0.150 0.000 0.000 -0.244 -0.310 0.000 0.000 0.000 0.000 -0.168 -0.168 0.000 0.000 0.326 0.326 0.167 0.284 0.223 0.000 0.000 0.000 0.000 0.000 -0.167 -0.167 -0.284 -0.284 0.192 0.000 0.442 0.442 -0.266 0.000 -0.158 -0.158 0.000 0.000 8.44924647 1.91785180 6.84860291 11.05336070 11.02115294 7.50072240 10.65172784 10.03326441 9.67569404 4.44143036 12.54433471 12.01817051 4.84069485 1.79231398 5.27541685 8.77688206 4.50282703 10.22544546 11.65877024 10.57250119 8.45443626 4.37729731 8.79846921 10.77817621 9.88172457 9.06337270 -0.08207184 2.50283976 11.17053057 4.75916649 7.71660686 7.54722154 11.00599086 11.46932669 10.64095725 5.22772183 9.49214321 1.14025513 9.03939862 12.20893989 10.03594098 7.93652900 -1.66703434 5.07436842 8.21095377 4.06082561 3.65482503 -0.66703434 8.45054567 4.11923996 6.48264987 10.98170962 4.97675771 10.61251322 11.11200637 10.36941970 7.34133112 11.41903888 12.93936570 9.55388556 5.83274827 5.82475513 10.00444367 1.65484794 -0.08207184 -0.08207184 9.42565987 12.674132 6.690455 8.331493 11.772084 10.042417 10.411053 8.966806 10.464438 9.553837 11.153036 13.286963 10.926994 8.984851 8.008860 4.114259 7.634399 11.346749 10.567121 11.592793 4.887491 14.085308 8.915985 9.044570 10.101914 8.281270 9.733382 10.184261 9.115901 11.173287 5.636683 5.925359 10.506892 10.088208 9.082244 10.844408 11.121417 9.963625 6.887491 8.702500 9.716607 9.138647 11.993515 9.204038 10.227720 10.447946 12.355184 10.731646 11.046719 10.217073 8.896099 NA 10.227387 7.214843 11.000236 10.729775 10.237161 5.784114 11.042848 10.110980 7.699225 13.707535 9.548436 10.567720 12.339492 12.098396 10.425990 5.792335 10.517778 9.325133 9.750755 TCGA-LL-A442 56 0 NA 889 breast stage iia t2 n0 (i-) mx female 2012 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 3 1 2 2 4 1 3 4 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 11.15695311 9.80291503 12.17958600 9.95977624 8.16888368 8.12526261 12.06085380 8.98143742 9.83977634 13.74213443 11.43573791 10.41598867 -0.35993442 13.18402198 3.37706821 10.19213263 7.00933821 7.59235986 6.46453268 13.20738679 4.07750792 14.09009094 7.31017014 9.78938122 10.76444079 6.09406079 0.05519565 11.46625524 10.01478138 2.05512623 7.58847104 7.70260006 NA 5.16366779 10.44450402 9.88605289 10.70507127 10.32192809 10.18571209 11.85765791 1.64011187 10.44745894 14.76456198 8.57377517 9.77794912 12.62831535 11.04595462 3.00932925 9.02308815 8.97549434 10.13729064 -1.94508208 10.81606933 3.09953086 5.45602086 4.75558197 10.43668448 11.70293722 10.42473895 11.70451002 13.02488781 7.33126631 10.35291761 10.77054373 11.30292075 11.38535818 5.86892377 12.53964981 11.92077819 -0.94480435 10.15678895 8.50635281 2.38067404 6.22004936 9.16562483 9.57772300 10.79048600 9.27491506 -0.35993442 3.41270024 11.63704826 11.05971320 9.91584055 9.20298233 0.00000000 0.00000000 -0.00401620 -0.00401620 -0.00166290 -0.00304750 0.00069327 0.00069327 -0.00041585 -0.00041585 -0.00055444 0.00263570 0.00263570 0.00069327 0.00069327 0.00069327 0.00416320 0.00416320 0.00235810 0.00041593 0.00180300 0.00708260 0.00708260 0.00708260 0.00917050 0.00917050 0.00917050 0.00471900 0.00000000 0.00000000 -0.00083160 -0.00401620 -0.00166290 -0.00166290 -0.00304750 -0.00304750 0.00069327 0.00069327 0.00069327 0.00110930 0.00110930 -0.00041585 -0.00027724 -0.00027724 -0.00027724 -0.00027724 0.00263570 0.00263570 0.00069327 0.00069327 0.00069327 0.00069327 0.00416320 0.00416320 0.00416320 0.00235810 0.00041593 0.00041593 0.00180300 0.00346870 0.00708260 0.00708260 -0.00318590 0.00917050 0.00917050 0.00471900 0.00121210 -0.23618000 -0.23521000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.235 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.5399645 -0.9448043 6.3543499 11.2933970 10.7457944 8.8172910 12.9026394 8.5171119 9.5924862 NA 12.3578519 10.4998925 3.5469932 2.5145768 4.5145705 7.7625010 4.4474602 8.8959194 11.3438635 10.7997652 8.9567627 -0.9448043 7.8150297 9.9158405 7.5125224 2.6989963 -1.9450821 NA 9.9072808 7.3474628 3.6097313 8.5247834 6.2498985 11.0864499 9.7646562 7.6569125 8.9642845 NA 7.6935776 11.9052307 9.8994550 8.5874974 -0.9448043 1.3770682 8.1584294 5.6401032 3.6698545 -1.9450821 0.6400656 6.6441187 2.3030793 9.5723188 NA 6.3994377 10.3370716 9.7429546 5.3949908 9.3277713 11.4882053 8.4148911 0.3770682 2.9131288 11.2253796 4.3030720 NA 2.0551262 1.0551262 14.524530 5.438845 8.873724 13.184022 10.348613 10.396660 13.207387 13.760180 8.948132 10.801026 12.430656 10.453618 8.975494 8.253587 1.055126 7.836501 9.988832 10.84711836 12.85997842 5.34976157 12.74289558 7.80668559 2.37706821 8.98809442 9.45975086 10.58783835 8.15185679 5.20488801 11.43573791 7.21753319 2.14260949 12.15990409 2.91312877 8.25711861 9.37988474 10.20584089 11.00697266 9.81540411 9.35091046 12.81679666 1.96203071 11.79768361 10.70507127 11.86812102 10.16366603 15.06234406 9.85077536 9.79365614 10.39415644 9.45975086 NA 9.53856435 4.91312398 10.13729064 -1.94508208 10.81606933 0.05519565 11.33765083 10.43668448 7.73813618 12.94863269 10.54574177 10.12626863 12.82249842 9.35892235 -1.94508208 1.51455153 10.38016589 11.01713376 9.80291503 TCGA-LL-A50Y 84 0 NA 762 breast stage iia t2 n0 mx female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 1 2 2 4 1 3 8 2 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 6.935946e-07 4.161568e-07 18.1818181818182 27.2727272727273 0 18.1818181818182 36.3636363636364 9.10460033 7.80115154 10.71371437 5.01979086 9.09259437 8.82875596 10.40241586 9.11254898 11.26177502 11.70124992 11.16795065 9.72628782 NA 13.83252070 1.60473557 10.02260681 4.63450034 7.53549157 9.32471364 12.99043704 NA 14.01644188 6.35070939 10.75035963 9.85663126 6.74771232 1.01977307 10.54286366 9.16062175 1.60473557 7.73403756 5.51164514 NA 2.82714832 8.84315916 9.33154019 10.16253710 11.03031994 8.87932654 9.55506724 7.89015664 11.11946843 13.16914206 5.43307963 9.81339514 9.94534624 9.68690334 4.01979086 7.69221725 7.05321454 10.70629242 -0.98022693 10.28716382 5.83996966 5.39482965 3.54335977 9.26296584 11.59627619 10.80851023 11.83297180 11.86410534 8.78797632 10.30634963 9.88942426 10.19471759 9.80769446 0.01977307 11.19689992 7.22436254 NA 10.03381239 6.95642959 1.34170116 4.01979086 10.27186590 9.01979197 9.50259972 8.09393354 1.34170116 10.24740776 11.60475438 11.65777517 9.74856270 9.78217395 1.2705000 1.2705000 -0.0055375 -0.0055375 -0.0135750 0.0000000 -0.0026322 -0.0139530 -0.8299300 -0.8299300 -0.0051018 0.0130740 0.0130740 0.0052749 0.0052749 0.0052749 -0.0052610 -0.0052610 0.0104240 -0.0011087 0.0139110 0.0148880 0.0148880 0.0148880 0.0044411 0.0044411 0.0044411 0.0263730 0.0112610 -0.0059867 -0.0138010 -0.0055375 0.0075000 -0.0106460 0.0000000 0.0000000 -0.0026322 -0.0094437 0.0073609 0.0058309 -0.0018014 -0.8299300 0.0084367 0.0084367 0.0090312 0.0090312 0.0130740 0.0130740 0.0052749 0.0052749 0.0052749 0.0052749 -0.0052610 -0.0052610 -0.0052610 -0.0037395 -0.0011087 -0.0011087 0.0139110 -0.8593200 0.0148880 0.0148880 0.0231450 0.0044411 0.0044411 0.0263730 0.0066532 0.0455660 -0.8564600 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.335 -0.824 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.259 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.825 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.335 -0.824 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.259 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.825 0.000 0.000 0.000 0.000 0.000 9.19970105 NA 7.26771931 11.51639604 11.65324126 9.27164114 11.88726365 NA 10.50107166 1.60473557 11.86861038 11.68491010 3.54335977 1.01977307 2.01980865 7.32813095 3.97398774 9.75111085 11.21054253 10.40241586 9.43024324 7.71675911 7.90853493 10.40349611 6.83357323 4.10725265 -0.98022693 NA 10.25041283 5.80115089 4.51164514 7.70629225 6.58964815 11.92253248 9.93417693 6.03102018 9.26415567 NA 6.55895024 12.69133292 9.46790812 9.06691581 2.18972969 5.61970352 8.61224891 NA 5.41211082 NA 3.92668264 6.55895024 3.10725265 10.60944296 NA 4.51164514 10.93455071 9.67353257 4.60475336 10.28599282 10.91385168 8.36851999 2.34172962 4.14907235 12.16969772 3.87777369 NA 0.01977307 1.01977307 13.453019 4.341723 8.479223 13.832521 9.913852 11.387207 12.990437 11.544089 8.549222 9.476146 12.293296 8.505621 7.053215 9.361867 1.341701 7.058710 9.913093 10.1809237 12.0897450 5.3948296 13.5022135 8.8335729 4.6636463 8.6600369 7.4544202 9.7218607 7.6197050 7.9884586 11.1679507 7.5196378 -0.9802269 9.4965380 8.9666981 6.7279096 7.6600366 9.6455006 10.3456594 7.9146094 10.0648690 5.5589502 5.6636492 11.9306969 10.1625371 10.5844177 10.3784430 10.3417200 8.7115355 7.5116451 9.7637847 6.3417207 NA 10.2553633 6.0310202 10.7062924 6.3948314 10.2871638 4.7477096 10.7587286 9.2629658 6.7612587 13.9959532 10.8471346 10.5010868 12.1725520 10.9434908 3.6047593 NA 8.9281843 9.4471047 9.1400296 TCGA-LL-A5YL 64 0 NA 519 breast stage iib t2 n1a mx female 2012 NA yes infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 3 2 5 3 2 4 4 9 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.629947e-06 6.242351e-07 22.7272727272727 48.4848484848485 0 24.2424242424242 4.54545454545455 8.6574896 8.4408044 9.8642004 4.3891400 9.6042710 8.5969702 9.1429163 9.2346326 11.4895858 10.1266716 10.9840891 9.7843196 4.6370711 13.5685333 2.6115265 10.5312496 6.6433844 7.8809958 9.9198740 12.2692361 NA 12.8120833 7.7020251 10.5592178 9.8956154 6.6621613 NA 11.2476183 9.7371329 NA 8.2960329 5.9940049 0.3891262 3.7583778 9.0532936 10.1451427 9.3452766 10.5557240 9.4588161 9.8614948 2.9741071 9.7714063 14.1090304 4.8588115 9.6195632 9.4170485 8.9715982 4.2304413 6.2135709 7.2093218 9.8601402 NA 10.6929233 5.3433403 5.3587690 3.3277448 9.5063526 11.8122584 10.9725387 11.1443082 11.7127602 10.0075280 9.8869944 9.8655511 10.0323975 8.7304759 0.3891262 10.9357154 11.0913152 NA 9.9940046 8.3257804 4.1617345 2.7110764 10.8550489 9.2429718 9.6457443 8.3966369 1.1261139 8.5235686 13.4695714 12.7507208 8.9989367 9.1261082 1.41860000 1.49110000 -0.53678000 0.00979430 0.00763920 0.00388540 -0.00069303 -0.00069303 0.00062118 0.00062118 0.01112100 0.00555290 0.00555290 0.00041593 0.00041593 0.00041593 -0.00615910 -0.00615910 0.00000000 0.00221930 0.00471900 -0.01147300 -0.01147300 -0.01147300 -0.02219500 -0.02219500 -0.03040400 0.00319100 -0.50970000 -0.51880000 -0.00401620 -0.51414000 0.00763920 -0.00304750 0.00388540 0.00388540 -0.00069303 -0.00069303 -0.00069303 0.00000000 -0.00415460 0.00624810 0.00138680 0.00138680 0.00138680 0.00041593 0.00555290 0.00555290 0.00041593 0.00041593 -0.52589000 0.00597000 -0.00615910 -0.00615910 -0.00615910 0.00000000 0.00221930 0.00221930 0.00471900 -0.51094000 -0.01147300 -0.01147300 -0.51373000 -0.02219500 -0.53134000 0.00319100 0.00249690 -0.00512270 0.03199900 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.496 -0.511 0.000 0.000 0.000 -0.514 0.000 0.000 0.909 1.419 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.496 -0.511 0.000 0.000 0.000 -0.514 0.000 0.000 0.909 1.419 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.5405820 3.2636054 7.3159330 10.9068118 11.7676180 8.0114386 11.4583685 4.6579258 9.4541995 2.2636054 12.5077592 11.5559793 2.5046204 NA 2.1261139 7.5523725 3.8041775 10.6002196 10.8621717 10.3481784 9.5063526 3.3277448 7.9589981 10.4686273 7.2758554 6.5920832 0.8042188 -1.1959464 10.0515142 5.5590665 7.4040925 7.1964979 10.1345367 11.6248935 9.7222978 2.3891538 9.1911202 NA 6.5920832 12.9100067 8.0449711 8.6291387 -1.1959464 4.2636129 8.8836648 4.0895829 4.8916428 3.9334593 5.7466944 4.4480353 4.1964969 11.2090554 7.9231212 7.1661239 10.7667146 10.0184991 5.1617305 9.8230756 11.6578794 9.7971184 3.2636054 5.7230424 10.7946385 -1.1959464 NA 2.6115265 2.2636054 11.3987285 7.9488385 8.8540284 13.5685333 10.3839673 12.2499708 12.2692361 9.6441710 8.6050798 9.3928946 12.8025060 9.1661237 7.2093218 9.3692822 0.8042188 7.4836602 9.8526668 10.2220325 12.4801370 4.3587690 13.7187912 8.3413983 6.7349169 8.5707088 8.2839602 8.9072055 7.7928645 6.0895829 10.9840891 8.0895824 NA 10.0738910 10.3447924 6.4429054 10.2141012 10.0419875 11.0547745 7.5789674 10.3040259 3.1261139 5.8376027 11.4843879 9.3452766 10.5261336 10.1153606 10.4036280 9.5295463 9.7163208 9.6362788 5.1440300 0.8042188 8.9347633 6.1261077 9.8601402 6.9840892 10.6929233 6.0895829 10.0568454 9.5063526 7.3702340 14.1282902 10.1221579 9.8048843 12.0753512 12.1668088 5.4906792 6.8015286 8.9179222 9.3882029 8.9551965 TCGA-LL-A5YM 88 0 NA 466 breast stage iiib t4b nx m0 female 2012 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 1 2 2 2 1 1 1 8 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.427581e-07 22.7272727272727 36.3636363636364 0 27.2727272727273 13.6363636363636 7.6960084 7.6455093 9.6763797 4.5817128 10.0376517 7.8663275 8.7310271 8.8360876 11.1535054 13.4050119 9.4700670 10.1800422 NA 14.0502715 0.6121166 11.3777866 6.8663269 7.1970486 6.8974885 12.2903928 NA 13.8121673 NA 11.0899994 8.9637617 9.5129530 NA 9.4834780 6.4449768 -0.9728459 7.2218800 4.4533859 NA 3.8344786 7.6418336 8.2462922 9.8060221 5.5028557 7.4407513 10.5462684 1.6120694 5.8600143 14.1057331 3.5291963 10.7626796 8.6436726 9.4512898 2.4865599 6.7413686 7.1251562 8.0796917 NA 10.1926587 4.3846784 3.2750518 4.8600143 8.0687826 11.1185589 10.8990288 11.2444755 11.2625395 10.6102064 9.7903360 9.9703710 9.3835756 8.5855443 NA 10.5860225 11.4512898 NA 9.2511252 7.8247850 1.3490255 2.4865599 10.0001034 8.3125259 10.7953079 7.5931775 1.6120694 4.9813184 10.6125556 10.8816024 8.9204252 9.3691982 1.021400 1.021400 0.195270 0.209620 -0.218120 0.678820 0.155400 -0.654540 -0.246420 0.273320 1.215400 0.789100 -0.658820 -0.653890 -0.653890 -0.653890 -0.666710 0.192990 -0.635100 0.196540 0.165050 -0.694320 0.914200 0.914200 0.065370 0.065370 0.065370 0.143550 -0.703790 -0.642460 0.000000 0.207020 -0.218120 -0.202740 -0.158860 -0.149010 0.155400 -0.654540 -0.654540 0.109290 0.176330 -0.673430 0.185250 0.185250 -0.663830 -0.663830 -0.658820 -0.657800 -0.653890 -0.653890 -0.653890 -0.671960 -0.666710 0.220680 0.148460 -0.635100 0.196540 0.170160 0.165050 0.142210 -0.694320 0.914200 -0.219230 0.065370 0.065370 0.154720 -0.263600 0.076135 0.149500 0.822 0.183 -0.654 -0.654 -0.461 0.193 -0.635 0.170 0.165 0.142 0.142 -0.694 0.196 -0.219 -0.219 0.000 0.000 -0.642 0.379 0.155 0.155 -0.259 0.124 0.000 0.000 0.207 0.207 -0.218 -0.218 0.523 -0.149 -0.499 -0.655 0.183 0.183 -0.029 0.220 0.185 -0.479 0.000 0.000 0.822 0.183 -0.654 -0.654 -0.461 0.193 -0.635 0.170 0.165 0.142 0.142 -0.694 0.196 -0.219 -0.219 0.000 0.000 -0.642 0.379 0.155 0.155 -0.259 0.124 0.000 0.000 0.207 0.207 -0.218 -0.218 0.523 -0.149 -0.499 -0.655 0.183 0.183 -0.029 0.220 0.185 -0.479 0.000 0.000 9.6500905 NA 8.5643420 10.7123104 12.0371271 9.0800991 11.4819369 3.9569116 10.6560247 4.6418350 11.4601873 12.2395622 4.7275611 NA NA 6.4021628 2.9340069 10.9403870 10.4343914 9.2774220 10.6968944 1.0271541 7.0271231 9.8166571 6.3580410 8.5467598 1.3490255 NA 8.4151409 5.5817128 6.9578612 7.5585049 4.8851058 10.6895516 9.4690302 NA 10.6026629 NA 5.1970476 13.0506181 7.9036403 9.5633708 NA -0.9728459 8.6763799 NA 6.0044025 NA 2.8344685 5.9219409 1.0271541 11.1701878 NA 5.9813207 11.6443615 10.0925397 3.6709763 8.1945417 11.2399239 8.4428651 3.2750518 4.2365768 10.4947291 3.4865599 NA NA 2.6120930 12.386972 7.494729 8.532935 14.050271 9.147361 11.254439 12.290393 12.137933 8.229248 8.522978 12.110104 10.004403 7.125156 8.510939 1.027154 7.815026 8.486555 9.4375750 11.6209815 4.8084829 11.7203862 7.3934454 3.5506914 8.3240396 8.7048256 7.7636944 6.0158075 10.0036877 9.4700670 9.6799686 -0.9728459 10.7998505 4.2365768 7.6248780 6.9158662 7.7101183 10.2691067 8.3195601 10.7865957 2.3490538 4.8600143 9.9661224 9.8060221 11.0122540 9.9013365 6.8150259 9.2892185 8.2487108 9.7652158 5.6995489 1.3490255 9.4271385 4.5189757 8.0796917 5.2939112 10.1926587 6.8663269 9.5269694 8.0687826 6.4947292 13.5964452 10.5619128 9.1653955 12.6199310 10.0467144 -0.9728459 0.7841689 7.9957903 9.1551180 8.1970486 TCGA-LL-A5YN 46 0 NA 447 breast stage iia t2 n0 (i-) m0 female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 3 3 2 4 4 6 5 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 6.935946e-08 18.1818181818182 13.6363636363636 9.09090909090909 31.8181818181818 27.2727272727273 8.4032592 7.7638491 10.7009397 5.0857773 9.6707394 9.1321874 9.0746366 9.4021455 10.3791248 12.5816935 10.5032401 10.0513837 3.0634167 13.8233494 2.5228342 9.1415600 7.3808221 7.8116020 9.7612455 12.2557020 0.9932033 13.4265173 6.7776551 11.1059133 10.2016810 7.4121371 0.6483734 13.3230789 11.4093688 0.6483734 8.7393661 5.1078050 NA 4.0176013 9.2080675 9.7099679 9.2507612 9.1521974 8.9213902 9.6323153 5.7216215 10.3568809 13.8980284 5.8734663 10.0753353 8.8031899 9.0968321 4.8963009 2.9703015 7.1823506 9.2752974 NA 10.1548446 6.0059232 6.5472246 4.5552640 8.4621530 11.7211742 10.4626871 11.0474715 11.8592459 9.2593966 10.1823503 9.8082430 9.9383905 9.5431894 1.3853206 11.4021456 9.9345444 NA 10.3278518 9.2789421 2.9703015 4.9213887 11.1485496 8.9291424 10.1294984 9.2029605 2.3853482 9.4043720 12.4490020 12.3541480 10.1888226 9.8763886 0.5597200 0.5742200 0.0154970 0.0146590 -0.1061200 0.0454750 0.3057500 0.2150400 1.5636000 -0.2961100 0.9997400 -0.0713680 -0.0713680 1.8366000 -0.0038286 -0.0038286 0.0236160 0.0212330 -0.0339150 0.1152600 -0.2304900 -0.5124500 0.9689100 0.4046600 0.3184100 0.3184100 -0.0052118 0.2793700 -0.0412470 -0.0412470 0.1471700 0.0154970 -0.2030700 -0.1061200 -0.2308600 -0.2308600 0.3057500 -0.2397500 -0.4181700 -0.0325380 0.0089415 0.9406500 -0.0580100 -0.0580100 -0.0580100 -0.0580100 -0.0713680 0.0498740 -0.2276800 -0.0038286 -0.1102000 -0.1102000 0.4982800 0.0212330 0.0212330 -0.1376700 0.0000000 0.0047684 -0.2274400 -0.2177100 -0.0191280 -0.1428500 0.0036570 -0.1538300 -0.0052118 0.2793700 0.0160560 -0.2405400 -0.2405400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.227 -0.229 -0.229 -0.144 -0.144 0.000 0.000 0.318 0.000 0.000 0.560 0.279 0.279 0.000 -0.241 0.000 0.128 0.000 0.000 0.104 0.201 0.000 -0.231 0.265 0.265 0.000 0.000 -0.296 0.704 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.227 -0.229 -0.229 -0.144 -0.144 0.000 0.000 0.318 0.000 0.000 0.560 0.279 0.279 0.000 -0.241 0.000 0.128 0.000 0.000 0.104 0.201 0.000 -0.231 0.265 0.265 0.000 0.000 -0.296 0.704 0.000 0.000 0.000 0.000 8.78621669 4.01760127 6.67811840 11.25693451 12.02576299 7.80447181 11.35169850 6.54383610 10.58003013 3.06341665 12.17095321 12.30586578 2.64837340 1.87077897 0.06336488 6.89629970 4.27285929 11.49438436 10.70184505 9.87076403 9.62851134 7.37174790 8.07463655 10.96503035 9.30777299 3.06341665 0.06336488 NA 9.64178191 5.85782428 5.84476978 7.34417960 7.60644075 11.64213091 9.62182991 3.45572832 9.74815779 NA 6.56325577 12.55112362 9.67443399 7.97928857 -0.93649706 5.12949734 8.24580367 1.38532059 3.23333590 3.06341665 8.15087188 5.57199528 6.02919445 10.95215240 3.76384708 6.89629970 11.71692605 9.63610944 7.05776217 11.23927057 13.26530334 9.05917625 5.90889935 6.78450791 11.25601020 1.64837340 -0.93649706 0.06336488 3.45572832 11.562640 7.774216 8.197835 13.823349 10.185590 10.517194 12.255702 10.767745 9.176917 9.679039 12.653996 10.900643 7.182351 9.359178 4.017601 8.011776 9.295830 10.4154526 12.2561643 4.1508683 13.3700356 8.7879231 8.4875756 8.6464921 7.2182271 9.8287368 9.5850097 7.8578249 10.5032401 7.6964042 0.6483734 9.4823159 8.1428938 7.4002724 7.8899578 10.8464074 9.8859800 8.6122312 9.7287450 4.8182984 8.5472250 11.4656378 9.2507612 10.8439489 10.6141559 8.4187605 9.4088144 10.4802067 10.5366076 5.2728630 NA 9.9883108 6.9521530 9.2752974 8.9491056 10.1548446 4.8447673 11.1197082 8.4621530 7.4514263 14.5736170 10.1482175 10.1152978 11.9180828 11.1169957 9.3160747 3.1508683 9.8755864 8.4231588 9.2395823 TCGA-LL-A5YO 50 0 NA 440 breast stage ia t1b n0 mx female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 3 3 1 1 2 6 2 2 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.363527e-07 2.427581e-07 0 37.1428571428571 0 34.2857142857143 28.5714285714286 10.3131116 8.3897329 11.1383773 7.2687179 8.9305972 9.1109781 9.3956432 9.9500061 10.5541196 12.2187525 10.6737373 10.3415583 2.4613714 12.4734283 3.1394368 11.1569388 5.9338511 8.7796793 7.1052192 11.4776137 -0.8606615 10.7513814 7.7393472 9.9981381 11.1433037 6.4155593 3.2268938 13.9001544 12.1311334 1.7243883 9.7476892 6.4432154 NA 6.2374662 9.7309568 9.6009138 9.3464488 10.0220774 9.2189192 10.5875507 5.6312877 7.9240690 14.1825899 7.3172028 9.4647399 9.6292823 9.2321916 4.4248348 2.8398790 8.3706556 10.6131402 -0.8606615 9.7596542 6.5231385 8.3968222 6.4523170 8.9707418 11.9133978 11.1397866 11.6734941 11.9534160 7.5101217 10.3694548 9.6671264 11.2777062 10.3628328 3.5988654 12.1675131 9.7967528 NA 10.3236899 9.7196931 2.7255885 5.8943230 11.0954475 9.3549674 9.7805831 10.2135758 4.1394368 9.4236803 13.0242727 12.0034270 9.9675710 9.8528210 0.10133000 0.10133000 -0.02835500 0.05822400 -0.04813300 -0.04793600 0.00000000 0.00000000 -0.17702000 -0.17702000 0.59069000 0.11038000 0.11038000 -0.04238100 -0.10715000 -0.10715000 -0.08601200 0.01279500 -0.24618000 0.14652000 0.02048300 -0.10342000 -0.10342000 -0.10342000 0.09856000 0.09856000 0.09856000 0.09246000 0.10133000 0.10133000 -0.07553900 -0.02835500 -0.04813300 0.03707600 -0.04793600 -0.04793600 0.00000000 0.00000000 -0.12652000 0.03933700 0.02370600 -0.17702000 0.05252500 0.05252500 0.00987090 0.00068058 -0.11665000 -0.11665000 -0.04238100 -0.10715000 -0.10715000 -0.17778000 -0.08601200 0.01279500 0.01279500 -0.23196000 0.14652000 0.14652000 -0.00492630 -0.05684600 -0.10342000 -0.10342000 -0.14207000 0.09856000 0.09856000 0.09246000 0.48492000 -0.12456000 -0.11652000 0.000 0.000 -0.107 -0.107 0.000 0.000 -0.238 0.147 0.000 0.000 0.000 -0.103 -0.103 0.347 -0.142 0.000 0.000 0.101 0.101 0.000 0.000 0.425 -0.125 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.373 0.550 0.000 0.000 0.000 0.000 0.000 0.000 -0.107 -0.107 0.000 0.000 -0.238 0.147 0.000 0.000 0.000 -0.103 -0.103 0.347 -0.142 0.000 0.000 0.101 0.101 0.000 0.000 0.425 -0.125 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.373 0.550 0.000 0.000 0.000 0.000 8.9500061 1.4613714 7.2001306 10.9370959 11.5158312 7.7176936 11.9534160 9.1794501 10.4113934 2.1394368 13.0471701 11.8037439 3.5988654 0.1394695 2.3093508 7.4748246 4.9723250 11.6732508 11.0109547 9.7140279 9.1687218 1.4613714 8.1506617 10.6921035 9.7206350 9.6669114 -0.8606615 NA 10.3311105 4.7243993 6.8741441 8.0403012 9.4748248 10.9659750 9.5445758 5.1618031 10.6044906 -0.8606615 7.5698867 12.4223780 9.1008841 8.1366139 -0.8606615 2.7243883 7.7206349 1.9468057 2.5988654 7.5057568 8.7374870 2.8398790 6.4613632 11.3446168 6.7687904 7.4881623 11.1259876 9.7823886 7.5988661 10.9703457 13.6150412 10.3706556 6.3586037 7.1673409 9.6708159 0.1394695 0.7243883 3.7243993 5.4432154 9.661977 9.811860 8.672764 12.473428 9.730957 11.207541 11.477614 8.808319 8.716863 9.733759 13.053820 10.453451 8.370656 8.527452 4.268719 7.396822 11.177324 10.784192 13.199117 5.694022 12.897028 9.080482 9.159025 9.003621 6.997415 9.783498 9.708341 8.919154 10.673737 8.061276 1.461371 10.356786 5.116714 9.109627 10.471471 11.465583 10.821551 8.869055 9.534969 7.363436 10.031218 12.963350 9.346449 11.058670 9.648220 9.882586 10.709290 9.356180 10.316854 6.686328 5.289182 10.146952 8.129539 10.613140 10.330494 9.759654 5.709291 11.047452 8.970742 7.553062 13.971484 11.122072 10.782389 11.816714 11.964592 10.038036 4.387363 9.826810 10.133788 8.988057 TCGA-LL-A5YP 49 0 NA 450 breast stage iib t2 n1a m0 female 2013 NA yes infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.976745e-06 4.855162e-07 8.45070422535211 21.1267605633803 4.22535211267606 47.887323943662 18.3098591549296 9.1237753 8.4034705 11.3562370 7.9967559 9.1956114 8.4433634 9.7816858 10.9072167 11.9644793 12.4686682 9.8211540 10.4391414 0.4395699 11.5872400 2.6620004 10.9516931 6.5341285 9.2608537 9.2264252 6.5057004 NA 8.7868632 8.2640395 10.1759397 9.6498766 7.1354189 2.6620004 12.2349744 11.1037620 4.9839330 8.1765766 8.4930845 NA 4.7372920 9.3850550 9.7365273 9.4101963 8.7883392 9.2044826 9.7326995 -1.1452862 5.6360097 15.9194545 7.2704747 10.8197114 10.8193505 8.9234270 4.7615406 2.8546540 8.6843713 10.3634338 NA 10.3884650 5.5128590 6.5550876 4.8546490 8.7912866 11.7521160 10.5846941 11.5281785 12.1212888 8.5270739 10.3796800 10.1485570 10.5645940 10.4688983 3.3782064 11.1365786 8.4693585 -0.1452862 10.7997266 9.6045180 2.5550799 5.7615379 11.5299441 9.4330214 11.0059823 9.0043958 2.8546540 5.2296879 12.3746534 12.7829819 9.5030062 10.9945197 2.348100 0.461870 1.821700 0.432770 0.399380 0.811190 0.032612 0.032612 -0.419480 0.976050 2.097900 0.031436 -0.052126 0.279310 -0.385490 -0.385490 0.384360 -0.399860 -0.244480 -0.393080 0.374950 -0.411900 -0.076812 1.171200 -0.410800 0.396880 0.550000 0.462460 -0.349160 -0.344120 -0.045499 -0.395080 -0.519460 -0.105520 -0.400190 -0.401520 0.162060 0.032612 0.361330 -0.234100 -0.366120 -0.426480 -0.091155 -0.098286 -0.205350 -0.279340 -0.053206 0.117560 -0.421890 -0.385490 -0.361810 0.401610 -0.374140 -0.136920 -0.136920 -0.985060 -0.396830 -0.397750 -0.395750 0.246380 0.165200 -0.076812 -0.117960 -0.444990 0.550000 -0.397970 0.752230 0.292310 -0.054690 0.000 0.000 -0.141 -0.341 -0.374 -0.374 -0.244 -0.393 -0.396 0.246 0.246 0.165 0.000 0.231 0.231 0.014 0.550 0.387 0.387 -0.358 -0.358 0.328 0.292 0.321 0.321 0.336 0.336 -0.422 0.000 0.411 -0.400 0.000 0.000 -0.297 -0.297 0.000 0.721 -0.205 -0.205 0.000 0.000 0.000 0.000 -0.141 -0.341 -0.374 -0.374 -0.244 -0.393 -0.396 0.246 0.246 0.165 0.000 0.231 0.231 0.014 0.550 0.387 0.387 -0.358 -0.358 0.328 0.292 0.321 0.321 0.336 0.336 -0.422 0.000 0.411 -0.400 0.000 0.000 -0.297 -0.297 0.000 0.721 -0.205 -0.205 0.000 0.000 7.2975922 6.1025763 7.0043958 12.1831833 12.1272784 5.7966938 11.0695748 9.6725116 9.4734470 5.2809118 11.5940073 11.9269169 4.1765781 -1.1452862 3.5550922 8.8000926 3.9839330 10.1703643 11.2050354 11.5268529 8.7853861 0.8546340 8.7942277 10.1278614 6.9526807 8.0195557 0.4395699 NA 10.5693234 4.2469629 7.0738170 7.9579366 7.3664009 10.6518806 10.7311656 3.8990403 11.0104156 6.2640391 7.9761820 12.6970972 8.3079194 9.1096771 -1.1452862 3.8546440 7.5585523 NA 5.8088458 -0.1452862 4.9631735 2.6620004 5.5270735 11.2223364 6.4619787 10.4739516 10.7234712 9.9374630 5.4840060 9.4226047 11.4718865 9.5083894 2.1765781 4.4396098 10.1055391 2.6620004 2.3140874 2.5550799 6.7250131 10.269112 8.637647 8.370348 11.587240 8.982643 10.483550 6.505700 10.067753 8.890822 10.513753 14.031601 11.870586 8.684371 7.808845 -1.145286 8.032068 10.219877 11.329875 11.652918 4.246963 13.652764 8.591051 5.636010 8.409237 8.280913 9.970460 7.609536 5.687539 9.821154 11.467978 4.808843 9.780945 9.964479 8.725275 11.952516 9.870064 10.022067 7.994200 9.343493 8.619520 6.505700 9.810182 9.410196 10.098418 9.725784 12.113362 11.569967 10.922755 10.360460 7.690699 NA 9.756941 7.909497 10.363434 7.609536 10.388465 7.516427 10.933113 8.791287 7.004396 13.452119 10.058608 10.096632 12.436438 11.212475 1.662023 -1.145286 9.892195 8.976182 8.989075 TCGA-LL-A6FP 90 0 NA 677 breast stage iia t2 nx mx female 2012 NA no infiltrating lobular carcinoma NA white not hispanic or latino NA NA 2 1 2 2 4 2 3 8 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.17313993 8.10081790 10.61891825 5.83601752 8.93541054 8.48596975 10.04546973 9.04501096 9.79021277 8.33201237 11.51259579 10.09151711 NA 13.44886323 2.23398007 6.95410207 6.81894257 7.17816984 8.56617699 12.69881783 -0.57346686 14.27005586 5.61644886 10.39029462 10.55203896 8.99837803 -0.57346686 9.46623006 9.54296935 NA 9.22266499 4.30927079 NA 2.01160298 8.72468813 9.82910462 9.86073239 9.59529758 9.54426860 9.73211721 1.01156720 10.47647404 13.27392755 6.87672321 12.30362195 10.53645617 8.95800685 0.01163876 6.50344097 7.24360911 9.90691073 NA 8.99363078 4.25951354 2.95018843 2.81895279 8.47647404 11.61490521 11.09218345 10.18067787 12.04776160 9.65904633 9.53710869 9.77313921 10.52958536 9.25237923 2.95018843 10.76619718 10.47851412 -0.57346686 9.94724418 7.84025361 2.28160924 2.51409700 10.65784666 8.52465767 9.74177504 8.53906496 0.01163876 6.22752546 11.46982367 9.96092838 9.67158388 9.50943972 1.5227000 1.5227000 0.0105640 -0.0065050 -0.0051610 0.0081959 0.0056919 -0.0019005 0.0040243 0.0040243 0.0040243 -0.5568700 -0.5568700 0.0175440 0.0175440 0.0175440 0.5505400 0.5505400 -0.5672400 0.0225850 -0.5475400 0.0573680 -0.5271600 0.0380650 -0.5258800 0.0528100 0.0528100 1.1584000 -0.5394600 -0.5745700 -0.0171160 0.0105640 -0.0051610 0.0016642 0.0000000 0.0000000 0.0056919 0.0056919 -0.0019005 0.4840600 0.4735200 0.0040243 0.0263730 0.0263730 0.0263730 0.0263730 -0.5568700 -0.5568700 0.7294300 0.0175440 -1.2929000 0.0696690 0.5505400 -0.5861800 0.6036100 -0.5672400 0.0225850 0.0225850 -0.5475400 -0.5529600 0.0573680 -0.5271600 -0.5623600 -0.5193800 0.0528100 1.1145000 0.0300290 -0.5279800 -1.2216000 -0.557 -0.557 -1.190 -1.190 0.551 0.551 -0.567 0.000 -0.548 1.142 -0.526 0.000 0.000 -0.558 -0.558 -0.519 0.000 -0.561 0.961 1.114 1.114 0.000 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.474 0.474 0.000 0.000 0.000 0.000 0.000 0.000 -0.557 -0.557 -1.190 -1.190 0.551 0.551 -0.567 0.000 -0.548 1.142 -0.526 0.000 0.000 -0.558 -0.558 -0.519 0.000 -0.561 0.961 1.114 1.114 0.000 -0.528 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.474 0.474 0.000 0.000 0.000 0.000 0.000 0.000 9.15028651 9.31536878 6.12011343 10.97713178 11.26228116 9.31503382 12.92503841 NA 9.97713178 0.01163876 11.66994823 11.90277677 1.74854711 4.09905109 NA 7.66503029 3.07047520 8.23236912 11.27563957 10.85472387 10.14387347 9.02281526 8.21615896 9.52202259 4.76647325 3.23398007 NA NA 10.52761628 7.24360911 5.66502887 8.28771238 5.50344097 11.53208387 9.35069569 3.28460297 9.28305107 NA 4.01158509 11.26326762 8.45591281 7.85707778 -1.57346686 4.53515093 8.06506117 5.84447856 3.23398007 -0.57346686 0.42664048 3.23707417 0.74854711 11.00853213 NA 7.45729222 10.74911705 10.17523765 2.12707194 8.86956886 8.96481447 7.03765018 2.95018843 5.39241016 10.59623738 -0.57346686 NA -0.57346686 1.01156720 13.2443451 4.0990511 9.3016069 13.4488632 9.9511673 11.7899389 12.6988178 8.9204809 9.4227246 9.9979040 13.1646122 8.3305073 7.2436091 9.3662046 0.4266405 7.9164737 9.9768913 10.0994927 12.6815065 5.4153091 13.7324717 8.5180610 1.0115672 8.5074430 5.9423245 10.0791791 5.6745539 6.0339559 11.5125958 6.2339801 5.6745539 9.5047763 9.2331751 6.0785373 6.0190836 8.9541024 10.9051423 7.6792908 10.8162568 5.8189426 0.7485471 12.0017262 9.8607324 10.8863132 10.4262732 10.2363936 8.6372969 8.6898946 10.1003763 5.2721165 4.9184769 8.5028398 6.4039051 9.9069107 1.5965536 8.9936308 1.4266405 10.0307153 8.4764740 6.3866282 13.5672556 10.4241578 8.9955317 10.7786689 10.2689759 -0.5734669 4.5162106 8.8932117 9.0731843 8.8942312 TCGA-LL-A6FQ 77 0 NA 80 breast stage iiia t2 n2a mx female 2013 NA no infiltrating ductal carcinoma 7 black or african american not hispanic or latino NA NA 1 1 2 2 4 1 6 8 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.05982789 8.42367061 10.84758632 4.77187502 8.60214580 7.68208024 10.63584924 9.56853171 10.63627623 13.48268305 10.99970002 10.18652544 0.49886356 14.07384578 2.37331412 9.54689080 5.51380970 7.17599059 8.03542926 12.58444124 2.23581895 13.77546723 3.82078145 10.56422038 9.64436573 5.34015988 -0.08604789 9.87895841 12.29732992 -1.08620104 6.23582278 4.82078655 -1.08620104 2.37331412 8.72446713 8.91248610 9.88687536 9.04317852 8.73885429 10.25708136 0.91387554 10.76759505 13.66329371 5.04770415 9.59073431 9.86809192 9.08382075 4.19929543 7.43745747 6.42168953 9.57834287 NA 10.73726289 3.00135189 5.54325150 4.16182320 9.19698393 12.16241622 11.09006881 10.86262790 12.06602200 8.87823641 9.58985260 9.95965527 9.74361830 9.24928604 2.49886356 11.90948612 10.60520299 NA 9.98132995 7.80567939 2.37331412 3.82078145 10.26040939 8.94731871 9.59776747 8.16892429 2.72124140 10.56718862 11.84942903 10.89760181 9.52952523 9.15349427 0.5097900 0.5151900 -0.0135870 -0.0116300 -0.0184000 0.5204200 -0.0188120 -0.0189210 -0.0179880 -0.0179880 -0.0179880 0.5122300 0.5155400 2.8208000 1.0004000 2.5283000 0.5089200 0.4964300 0.5151900 0.5104800 -0.0151010 -0.0274290 -0.0274290 -0.0211450 0.2897100 0.3048400 0.3048400 0.5204200 -0.0184000 -0.0119340 0.0131660 -0.0115200 -0.0184000 -0.0156510 0.5204200 0.5235700 -0.0188120 -0.0189210 -0.0174380 0.5111800 0.5111800 -0.6964300 -0.5592900 -0.5556000 -0.5556000 -0.5700600 0.5155400 0.5155400 -0.8580100 0.3573500 -0.5572100 -0.5572100 0.5089200 0.5007600 0.5007600 0.5059600 0.5104800 0.5104800 -0.5828800 0.5471200 -0.0274290 -0.0274290 -0.0079334 0.2897100 0.3048400 0.5057900 -0.0137240 -0.0290850 -0.5904200 0.499 0.499 0.000 0.000 0.496 0.496 0.506 0.510 0.000 0.506 0.506 0.000 0.000 0.000 0.000 0.305 0.305 0.000 0.510 0.520 0.520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.520 0.520 0.000 0.000 0.511 0.511 0.000 0.000 -0.556 -0.556 0.127 0.127 0.499 0.499 0.000 0.000 0.496 0.496 0.506 0.510 0.000 0.506 0.506 0.000 0.000 0.000 0.000 0.305 0.305 0.000 0.510 0.520 0.520 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.520 0.520 0.000 0.000 0.511 0.511 0.000 0.000 -0.556 -0.556 0.127 0.127 9.31690758 0.49886356 4.79654065 11.92931068 11.74064272 8.60041361 12.28784828 3.26438630 10.65151906 3.08382606 10.82341374 11.54426972 4.19929543 2.82079166 2.08382606 7.21310325 3.23581895 10.62513238 11.13245886 9.52676408 8.97053331 9.47709180 7.73087903 11.18739983 5.37332804 5.57210749 2.91389468 NA 9.12090994 5.06364099 5.60039763 7.38150142 4.30621119 11.13296125 8.90966271 1.72124140 10.15885403 NA 5.49885718 13.08154898 8.06618070 8.26040915 NA 0.91387554 8.29760001 1.23584958 5.69525614 -0.08604789 2.08382606 6.61447428 -0.08604789 11.44965701 0.91387554 6.12334960 10.72607295 9.92302435 3.86809408 9.36922283 11.51473772 7.74361864 1.72124140 3.37332804 10.52353608 3.00135189 NA 1.72124140 2.37331412 13.8038249 6.2448129 8.5193752 14.0738458 10.4379475 11.2431314 12.5844412 11.9308780 9.1774701 9.7609529 12.7991153 8.7888769 6.4216895 9.4266361 0.4988636 6.7718763 8.7196393 9.4057486 12.9991191 6.6281407 13.0471928 8.7919466 2.7212414 8.2222346 7.2475431 8.6806232 6.3401599 8.5559473 10.9997000 7.0888211 -1.0862010 10.7629097 4.8911761 7.9882779 7.1135682 9.0406001 10.1981414 7.8327590 10.0655465 4.7965407 3.3062185 11.5743818 9.8868754 10.8192827 10.2894782 10.1282148 8.2758396 9.6186639 9.5774538 6.6349954 NA 9.1563552 6.0938052 9.5783429 3.0013519 10.7372629 4.5286026 9.8245384 9.1969839 8.2062173 14.6785599 11.2122447 9.3094297 12.0094575 10.8818423 0.4988636 NA 9.2791244 9.3651068 7.7873397 TCGA-LL-A6FR 50 0 NA 489 breast stage iia t2 n0 (i-) mx female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 5 1 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.4434571 7.4147850 10.3153431 3.9017165 8.7409191 6.2825362 9.2882963 9.5658662 12.8952433 12.4095098 9.2839789 9.7863944 2.1240965 12.9794211 2.3167540 11.9889570 5.8866087 7.1046554 9.4498950 4.8086064 NA 8.0948299 9.7524230 10.5491736 9.6907053 6.4252763 -0.6831592 8.4382862 11.1261189 NA 8.6431823 5.7924858 NA 3.1241130 9.7833391 8.4434571 8.7884280 8.1963361 9.3153432 9.3922318 1.6386763 9.7026151 14.7824466 3.4152043 9.0189254 9.0084961 8.6296357 4.2709475 NA 8.0275594 8.4356936 NA 10.1886580 6.0309981 5.2474908 5.0716383 6.4866774 11.5425626 10.1152245 11.0476474 11.1309346 9.2882963 10.1832590 10.0076237 9.0429709 9.5467731 1.6386763 11.2976063 10.1224966 0.9017261 11.1168437 7.9461091 3.7761882 2.4866886 10.8770855 8.6917920 9.7058463 7.9129426 2.3167540 9.0783040 12.9008931 11.0106752 9.2767546 10.4356938 1.320300 1.341300 0.551030 0.723190 -0.334220 -0.042788 0.735110 0.762740 -0.369060 0.085320 0.560630 0.016286 0.016286 0.045708 -0.417730 -0.113650 -0.313190 0.017684 0.064511 -0.357610 0.716410 -0.817780 -0.058462 -0.037354 -0.136780 1.393800 -0.423420 0.874080 0.139050 0.249490 -0.285350 -0.185720 -0.818040 -0.333990 -0.352930 -0.361600 -0.406280 0.762740 -0.376960 0.025812 0.198620 -0.387990 0.400940 0.400940 -0.354640 -0.381230 0.016286 0.016286 -0.373130 -0.417730 -0.285130 -0.285130 -0.313190 0.017684 -0.011772 -0.332720 -0.075745 -0.075745 -0.228710 -0.025893 -0.029835 -0.037354 -0.357720 -0.224900 -0.427200 0.000000 0.047836 -0.378980 -0.394970 0.000 0.000 0.000 -0.263 -0.313 0.000 -0.333 0.000 -0.229 0.000 0.000 0.000 0.000 0.043 -0.342 0.000 0.000 0.249 1.320 0.000 0.000 0.000 0.357 -0.261 -0.261 0.388 0.723 -0.734 -0.353 0.000 -0.297 0.735 0.735 0.199 0.199 -0.370 0.560 0.401 0.046 -0.040 -0.248 0.000 0.000 0.000 -0.263 -0.313 0.000 -0.333 0.000 -0.229 0.000 0.000 0.000 0.000 0.043 -0.342 0.000 0.000 0.249 1.320 0.000 0.000 0.000 0.357 -0.261 -0.261 0.388 0.723 -0.734 -0.353 0.000 -0.297 0.735 0.735 0.199 0.199 -0.370 0.560 0.401 0.046 -0.040 -0.248 9.1417115 9.5213238 7.2176195 11.8141056 11.7066529 7.5655819 11.0556894 NA 9.1610190 0.3167250 12.7268065 11.8029341 6.2825362 NA 2.9017068 8.2738548 3.7090700 10.4505371 10.7138925 9.2039734 10.0301392 0.3167250 8.1496425 10.4652293 4.8086064 4.2709475 3.1241130 2.4866886 9.4588598 NA 5.8866087 7.4766239 9.9185235 11.4559235 9.8970112 NA 9.9533773 1.3167250 5.4664999 13.2447158 8.0446733 8.9838643 0.3167250 3.2236388 8.6896179 3.8403122 5.6743053 NA -0.6831592 4.8086064 3.8403122 10.9282386 10.7653852 10.1993958 10.9296212 10.0632670 6.1871165 8.6543747 11.3346050 8.0275594 -0.6831592 5.0446739 9.8578493 1.6386763 5.5262066 NA 8.4588598 11.426884 9.120884 7.091540 12.979421 9.901715 11.932382 4.808606 11.551271 8.963797 9.414785 13.453183 10.068297 8.027559 9.561116 4.901716 7.322377 8.774134 9.2385937 11.2922425 5.2236426 14.0975990 8.8086058 6.4766247 9.3293773 8.0032531 8.1998235 4.8403122 6.1622423 9.2839789 11.6743047 1.3167250 8.8922920 11.0041284 8.2909952 10.0215210 9.1208838 9.3391205 7.1809385 10.7324944 2.3167540 -0.6831592 8.9383467 8.7884280 10.0783039 9.5467731 10.1685018 10.9300818 10.3474198 9.8383532 5.3391196 3.7090700 8.9332097 6.9678050 8.4356936 2.7761882 10.1886580 7.7218942 9.7565835 6.4866774 7.9927095 14.4071960 11.0766409 9.5322858 12.0135029 11.0674597 NA 1.9017261 9.4703048 8.2504434 8.9314626 TCGA-LL-A73Y 67 0 NA 477 breast stage ia t1c n0 mx female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 NA NA 5 5 2 9 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.8075469 9.7557080 11.2384455 9.3507465 9.3067038 9.4508176 9.4365073 9.4410419 10.8764025 11.5410553 10.6522887 10.3659288 1.7100846 11.9267111 3.1840263 10.7085337 6.3793784 8.7262894 10.0966810 5.8347946 NA 7.4590381 8.7422987 9.5151918 11.3917288 4.1548829 -1.4599727 9.4994525 10.2266755 2.6276302 9.2046222 10.4859845 0.5401265 5.1251386 9.4463139 9.7869155 9.4782843 9.3934846 10.2362732 12.5477279 0.8621141 6.4105395 14.7371420 9.3198943 9.3100129 10.8902854 10.8275987 4.2680975 NA 9.2475340 11.1599364 1.1251221 10.7188398 8.0851394 6.8800255 4.9324912 10.3938743 11.5869579 9.9779270 13.4235342 13.4053283 6.9367793 10.7422988 10.6761535 11.4769969 11.3250142 4.9664397 11.6097926 10.4031996 6.2055118 10.1157142 10.2130422 4.9831167 6.1326324 9.2063990 10.1617690 11.2312641 10.5954574 7.4349926 9.0705812 14.0187234 12.6637306 9.5611548 10.1142954 0.6282500 1.1401000 -0.0131380 0.4331100 -0.0125760 -0.0183530 0.9285800 0.4364800 -0.1230400 1.6013000 1.6556000 -0.0078863 -0.0068441 0.4854900 -0.0215100 0.4285600 0.8852600 -0.0195100 0.4439200 -0.0092666 0.0104240 -0.0049844 -0.0049844 1.5608000 0.4064900 1.1098000 0.3825400 0.4605800 0.0447320 0.4317600 0.7663800 -0.0120240 0.5011600 -0.0143660 -0.0183530 -0.0183530 0.0267950 0.4364800 0.4364800 0.4706700 -0.0202220 -0.1047300 -0.0037395 -0.8302500 -0.0044312 -0.0044312 -0.0068441 -0.0052610 0.7286700 -0.0215100 -0.0093577 -0.0070576 -0.0078863 0.0114000 -0.0039898 0.4996000 -0.0092666 -0.0092666 -0.0147780 0.2003000 -0.0049844 -0.0049844 0.0000000 0.4064900 0.3931300 -0.0210380 0.6894300 0.3979500 -0.0185420 0.000 0.000 0.485 0.000 0.000 0.000 0.444 0.000 0.000 0.148 0.148 1.561 1.561 0.660 0.000 0.455 0.455 0.432 0.617 0.000 0.441 0.689 0.000 -0.155 0.612 0.000 0.427 0.000 0.000 0.000 0.000 0.451 0.451 0.000 0.000 1.497 1.601 0.000 0.000 0.230 0.230 0.000 0.000 0.485 0.000 0.000 0.000 0.444 0.000 0.000 0.148 0.148 1.561 1.561 0.660 0.000 0.455 0.455 0.432 0.617 0.000 0.441 0.689 0.000 -0.155 0.612 0.000 0.427 0.000 0.000 0.000 0.000 0.451 0.451 0.000 0.000 1.497 1.601 0.000 0.000 0.230 0.230 8.2301727 NA 6.6008704 10.6972061 12.0696055 7.7127278 11.8316335 9.2066476 9.8386844 1.3475523 11.8469487 11.4065826 11.6994156 -0.4597743 5.0637359 9.1138221 3.5845657 9.7886955 11.2879484 10.8284643 8.2336619 0.1251221 8.0499498 10.2236083 8.1695317 4.8439537 NA NA 11.6628412 7.0479691 7.6008711 8.1400879 10.1767996 10.6347970 10.4277764 4.7881010 9.2518419 5.0159079 8.4228179 12.4678604 9.3190735 8.3934844 NA 5.5059608 8.2249234 3.4943772 6.5117179 0.1251221 6.7544947 4.9233631 4.7881010 9.8911141 3.3981588 8.9184697 10.7126025 9.8564565 5.9580283 9.9081357 12.4375478 9.1043243 3.0637445 4.6694577 9.9292685 3.8621042 6.7975630 0.1251221 10.0006309 13.141013 7.162227 8.405908 11.926711 10.602558 10.920636 5.834795 11.763724 9.028015 11.667041 14.159449 10.472759 9.247534 8.964341 4.154883 9.556983 10.771096 10.964341 11.471282 5.679725 15.199097 9.228425 9.574974 9.029019 7.752063 10.004971 8.057844 6.848514 10.652289 6.476813 5.140087 10.425109 7.230173 6.933479 13.320869 10.361949 10.564968 7.960135 9.642807 9.688652 7.930344 11.282358 9.478284 10.179968 9.482689 12.778580 11.941455 11.089238 11.188083 9.029019 NA 9.572930 8.119227 11.159936 7.776189 10.718840 7.425871 10.705383 10.393874 7.268096 14.195257 10.508482 11.158560 12.411984 11.058090 6.595457 1.862114 10.370294 9.988808 9.887796 TCGA-LL-A73Z 55 1 227 NA breast stage iv t1c nx m1 female 2013 NA yes infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 4 4 4 2 3 6 4 9 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6939796 8.7913811 10.8510520 7.7898851 8.4600786 8.9946391 9.6385472 9.8084723 11.6038528 12.6343861 10.8084723 10.1402652 1.8769982 12.5001917 3.0469275 10.9339724 6.2693137 8.5998035 9.4420982 11.7913812 2.1989341 11.3993324 9.3517160 10.0171036 10.5890931 4.8769982 NA 10.2569158 10.8685179 -0.1229625 8.5547158 7.3074486 -0.1229625 3.8769982 9.4628975 9.3946655 9.3768419 9.8889221 9.5808996 10.5244544 5.1989223 10.1159978 14.7146486 6.8745708 9.4610189 10.3995775 9.9055928 5.5352069 3.1989184 8.4769090 12.2273828 0.4619476 10.6323009 5.6049164 6.3926952 5.3364262 10.0791199 11.8409758 10.9437580 12.0795790 12.3278207 8.5154318 10.6587656 10.4572547 11.0049904 10.3517160 4.2345473 11.2487727 10.1243302 0.4619476 10.0362367 9.1177875 4.3045987 5.4005584 10.6176201 9.8649706 9.6451803 9.5405541 4.8077310 8.3343770 13.2592823 12.2898305 9.6368843 10.0292809 0.2897700 0.2897700 0.0025545 -0.0350400 -0.1329000 0.0891270 0.0070826 0.3133800 -0.1614500 -0.1353600 0.7667800 0.2440400 0.2440400 -0.0343590 -0.0343590 -0.0343590 -0.1327700 -0.1327700 -0.0253460 0.0020805 0.0355240 -0.1300500 -0.1300500 -0.1300500 0.0132130 0.0132130 0.0132130 0.8272500 0.0104240 -0.0113350 0.0000000 -0.0350400 -0.1414900 -0.1329000 0.0891270 0.0891270 -0.0183530 0.0597600 0.1111300 0.3603500 -0.0040949 -0.1603900 0.0975420 0.0975420 0.0975420 -0.0020784 -0.1196500 -0.1196500 -0.0343590 -0.0343590 -0.1402600 -0.1600200 -0.1327700 -0.1327700 -0.1327700 -0.0253460 0.0020805 0.0020805 0.0355240 -0.0764120 -0.1300500 -0.1300500 -0.0916840 0.0132130 0.0132130 0.5746900 0.1283000 -0.0087146 -0.0087146 0.244 0.244 0.000 0.000 -0.133 -0.133 0.000 0.000 0.000 0.000 0.000 -0.130 -0.130 0.000 0.000 0.000 0.000 0.000 0.290 0.551 0.000 0.128 0.000 0.000 0.000 0.000 0.000 -0.133 -0.133 0.000 0.000 0.000 0.000 0.000 0.000 0.510 0.646 0.000 0.000 0.000 0.000 0.244 0.244 0.000 0.000 -0.133 -0.133 0.000 0.000 0.000 0.000 0.000 -0.130 -0.130 0.000 0.000 0.000 0.000 0.000 0.290 0.551 0.000 0.128 0.000 0.000 0.000 0.000 0.000 -0.133 -0.133 0.000 0.000 0.000 0.000 0.000 0.000 0.510 0.646 0.000 0.000 0.000 0.000 8.9723931 NA 7.4506430 11.1681668 11.2034255 7.5488912 11.2800081 8.4771135 9.2600739 4.8311932 12.8775243 11.6401213 2.6843475 1.1989341 2.7838966 8.0419028 4.5774349 11.5385515 11.0699053 9.8369981 9.5360999 4.8769982 8.3748478 10.4234082 7.3116239 8.6352193 3.1989184 -1.1231197 11.0162276 5.1623994 7.4953818 7.3688495 9.8571357 10.5229832 9.8224399 4.4917056 9.5652464 0.8769589 7.9021357 12.7542802 9.1955388 9.2465934 NA 2.8769982 7.6971747 4.6583543 4.8542750 8.1154006 6.5843552 3.7838862 4.2693100 10.5683034 7.2079133 9.6859603 10.3643336 9.8084723 5.1623994 10.2372945 13.2219854 8.6418675 3.5208497 4.6049194 10.3016872 3.0469275 -1.1231197 1.1989341 4.0469188 10.928497 6.734976 8.036868 12.500192 10.162976 10.781631 11.791381 10.412271 8.973711 9.826093 12.834642 10.598950 8.476909 8.192146 3.631884 7.687567 11.196950 10.903519 12.416882 5.563497 13.596221 8.818044 7.328207 8.943085 7.896587 9.772162 7.700363 7.076668 10.808472 6.066821 4.520850 10.031181 8.286387 7.363469 11.207073 10.415670 10.422443 8.153120 10.029915 8.267165 6.499049 10.327259 9.376842 10.734977 9.705132 11.185051 10.174486 10.158347 10.034343 7.269314 NA 9.776360 8.021960 12.227383 6.854276 10.632301 4.985519 10.658766 10.079120 7.277875 14.374411 10.799209 10.573094 11.988132 11.376344 5.671412 2.198934 9.751977 9.746590 9.318903 TCGA-LL-A740 61 0 NA 441 breast stage ia t1c n0 (i-) mx female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 5 2 3 2 2 6 4 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.7453320 9.8607048 11.2063667 8.7412546 8.6027979 9.1782411 9.3487246 10.0928190 10.5493871 14.1956665 9.3024310 10.4446229 1.8613202 13.8076282 8.0880112 10.9906141 7.4090828 8.1508379 6.0401341 12.0694300 NA 10.4703046 1.8613202 9.0155868 11.4639269 8.7642088 3.2763627 9.2857307 11.9702911 1.8613202 8.5431552 8.0901500 0.6914448 4.9202266 10.2149681 10.0318126 9.1457055 10.1942379 9.4370804 11.4233615 -1.3086445 7.7548013 15.2224525 7.9372914 9.1218588 10.5087895 10.4739949 3.7358038 4.1176701 8.7316958 12.2255874 0.6914448 10.6597129 5.3352617 5.9675306 5.4056521 10.1155724 11.1727010 10.3827135 12.3406623 12.5212279 7.2838634 10.5552052 10.2269391 10.8497003 10.5755767 4.5242957 11.2903891 9.0664455 NA 10.3216732 9.0456554 4.0636582 4.8411529 9.7289531 9.9434802 9.7378481 9.5171599 3.6455979 9.5131800 12.8156082 12.7218146 9.3970386 9.2763687 0.00320400 0.00320400 0.00000000 0.00139980 -0.00787330 -0.00248080 1.19300000 -0.59030000 0.56385000 0.56385000 0.55444000 -0.00510980 -0.00510980 -0.00801140 -0.00801140 -0.00801140 0.00612200 0.37821000 -0.00814950 -0.00068004 0.00181600 -0.53215000 0.02596500 0.02596500 0.02386000 0.00946210 0.00946210 0.58025000 0.00946210 0.00320400 0.00195480 0.00000000 -0.00544740 -0.00234440 -0.00248080 -0.00248080 -0.61891000 -0.58862000 -0.60410000 0.59549000 0.57221000 0.54737000 -0.00704470 -0.00704470 -0.00704470 0.00278750 -0.00510980 -0.00510980 0.47806000 -0.00801140 -0.00801140 -0.01626000 0.00070626 0.38041000 0.93510000 -0.00469490 0.00098364 0.00098364 0.00181600 -0.00123430 -0.53215000 0.02596500 -0.00525690 0.02386000 0.00946210 -0.00248080 0.00960140 0.00834810 0.00834810 0.000 0.000 0.000 0.000 0.000 0.346 0.000 0.000 0.000 0.000 0.000 -0.532 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.239 -0.590 0.575 0.575 0.564 0.564 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.346 0.000 0.000 0.000 0.000 0.000 -0.532 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.239 -0.590 0.575 0.575 0.564 0.564 0.000 0.000 0.000 0.000 7.6658205 1.4987615 5.8613301 10.9605328 12.4207082 7.1388616 11.3166583 8.6338765 9.2170933 NA 11.7125596 11.5289867 2.8613401 2.0133193 3.7788709 6.9202254 3.7788709 8.7933819 11.5918956 9.7782058 9.2071059 7.2149679 8.0944182 10.1124190 6.6800908 12.8556060 5.9105744 NA 11.0059894 3.0837240 6.3424570 8.1732054 10.2707221 9.1629187 9.1426171 3.5982937 8.6800908 -0.3086445 8.1932434 12.2885276 8.4345573 9.3097917 -0.3086445 7.8663319 7.3531839 1.0133551 4.0837240 11.6729734 4.5242957 5.2459938 3.0837240 11.0767293 NA 7.7109972 10.2031588 10.0896153 4.8206896 9.8031939 11.3406623 9.0794234 1.8613202 4.2763701 10.0144609 4.4727672 NA -1.3086445 1.0133551 11.375210 5.939335 8.946435 13.807628 9.903294 10.316658 12.069430 10.200686 8.689997 10.164605 13.360346 9.482569 8.731696 8.207106 NA 8.497150 12.055404 11.0992050 12.6011117 4.5242957 14.6363005 9.3638314 7.4595906 9.6928142 7.5679234 10.0653534 7.3848934 8.6672542 9.3024310 7.7894384 4.1832562 10.3478309 4.9008571 7.7393209 11.3433547 10.2536486 10.8585106 7.7946940 9.8650832 8.8411533 5.7358010 9.9108652 9.1457055 10.1359034 10.0390275 10.3638315 10.4575209 9.9634526 10.0150239 8.3171150 NA 10.6429131 6.8608300 12.2255874 4.6221456 10.6597129 7.4462935 10.8452748 10.1155724 7.0533503 13.6903931 10.2631587 10.3051956 12.5599393 11.0737600 2.4987615 0.3001823 10.1640970 10.2674180 9.4039332 TCGA-LL-A7SZ 49 0 NA 594 breast stage iib t2 n1a mx female 2013 NA yes infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 1 3 1 2 7 4 1 8 5 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.9031154 7.9587296 10.3554662 5.0936574 9.8276774 8.1828527 9.0563781 9.0507019 10.4345991 12.0730406 11.0224645 9.7304318 1.8008688 11.6703170 2.8008688 9.9556955 6.2068698 8.5151230 7.9465548 11.7131679 NA 12.3533543 1.4789718 10.8559483 10.9031156 7.7029511 5.2603080 11.4711795 10.9946491 -0.5209764 8.9010141 4.5664133 NA 8.9728046 8.4647912 8.8734118 8.5769812 8.3086721 8.2405004 8.8583276 4.5233424 8.2271423 14.3823133 4.5008721 9.9146195 9.0200460 8.5504117 4.0639084 NA 6.5769816 9.5096165 NA 9.9394051 7.5123723 6.2068698 5.1228052 8.0296958 11.2342541 10.1871710 10.1182900 11.3543147 7.3918390 9.9485911 9.6538749 8.9506244 9.9738048 2.6488796 10.0015308 11.6798479 -0.5209764 10.0373700 7.9907019 1.4789718 5.9383799 10.3102565 8.6004827 10.0402372 10.6835204 1.4789718 9.8872790 11.3392603 11.8471829 9.5123723 9.0258438 0.14355000 0.14355000 0.00000000 -0.23912000 0.01433000 0.19026000 0.73416000 -0.23178000 1.14200000 1.21090000 1.54430000 -0.00013862 0.01866300 -0.06477700 3.42190000 -0.24849000 0.23721000 0.23721000 -0.30721000 0.04287400 -0.06115200 0.32592000 -0.25733000 0.38899000 0.04443200 0.04443200 1.41650000 0.21869000 -0.02258400 0.14355000 0.15084000 0.00000000 -0.00581400 0.01964000 -0.24170000 0.03171800 0.73416000 -0.23813000 -0.25890000 -0.00124730 -0.16243000 -0.03612900 -0.17689000 -0.17689000 -0.17689000 -0.10513000 0.01866300 0.01866300 -0.06477700 -0.12169000 -0.24849000 -0.24849000 0.23721000 0.23721000 0.23721000 -0.30721000 0.04287400 0.04287400 -0.06115200 0.42150000 -0.11587000 -0.25733000 0.21407000 0.04443200 0.15218000 -0.06289800 -0.45158000 -0.65323000 -0.30416000 0.000 0.000 0.000 -0.184 0.237 0.237 -0.307 0.000 0.000 0.421 0.421 0.210 0.326 0.214 0.214 0.000 0.000 0.000 0.144 0.146 0.146 0.000 0.208 -0.170 -0.170 0.000 0.000 0.000 0.000 0.000 0.000 -0.232 -0.232 0.000 -0.161 1.154 1.154 -0.177 -0.177 0.000 0.000 0.000 0.000 0.000 -0.184 0.237 0.237 -0.307 0.000 0.000 0.421 0.421 0.210 0.326 0.214 0.214 0.000 0.000 0.000 0.144 0.146 0.146 0.000 0.208 -0.170 -0.170 0.000 0.000 0.000 0.000 0.000 0.000 -0.232 -0.232 0.000 -0.161 1.154 1.154 -0.177 -0.177 0.000 0.000 8.6312342 0.4789200 7.6588584 10.9941563 12.1619438 7.5575801 11.2846931 6.7684146 10.2566730 -0.5209764 12.7052109 12.0682423 4.6082297 2.0639171 -0.5209764 6.7918323 5.6884014 11.9268074 10.7167567 9.0316182 9.6822973 0.4789200 7.9985854 10.4236614 9.3102565 3.0639171 4.3369332 NA 9.2405004 4.6488738 5.5664133 7.9748040 5.3615929 10.8825099 9.0899740 3.0639171 10.8104261 NA 6.1931942 13.1631500 8.9887242 8.3676926 -0.5209764 0.4789200 8.2304932 4.6884042 6.4096862 2.2862898 6.5664118 6.0943944 6.4331447 12.4807093 NA 4.6082297 11.3922127 9.7701199 6.6286963 10.1706927 12.0922783 9.2085699 5.5013181 6.1931942 10.2454782 1.4789718 -0.5209764 NA 4.4789524 14.080873 6.286305 8.915661 11.670317 9.671242 11.212812 11.713168 9.142507 8.805379 9.856160 12.093199 11.214505 6.576982 8.836501 2.478946 7.592692 8.818799 9.9445157 11.6375589 4.6488738 12.4857995 7.8669667 7.0563776 8.8883402 7.9192787 8.4141440 8.6835203 9.5517517 11.0224645 8.3431355 1.0639171 8.8819613 5.7268775 8.9955159 9.8331986 10.2000484 9.4718875 8.1389097 10.3446825 5.2863045 9.4461756 12.0684108 8.5769812 10.6804606 10.0825757 8.6056536 8.7573987 9.2068698 10.3039080 5.9708030 -0.5209764 9.0629533 5.9546826 9.5096165 10.9135775 9.9394051 4.7268748 10.6902292 8.0296958 7.6030707 14.3468554 10.8734120 9.6017773 10.9892189 11.2782309 4.4789524 2.0639171 8.7827300 8.3918386 9.2085699 TCGA-LL-A7T0 70 0 NA 376 breast stage iib t2 n1a m0 female 2013 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 1 2 NA NA 1 1 1 8 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.53892494 8.56964109 10.98668838 7.34784456 8.85719601 8.60844446 10.11595230 9.58210114 9.64961815 14.00365951 10.24357293 10.17707228 NA 13.73802585 3.08314527 9.10920357 4.77119892 8.60146662 8.72218046 12.53423785 3.82010746 12.65499921 5.18000460 9.69054560 10.94767134 2.91322453 -0.08681377 11.54211737 10.76847408 -1.08681377 10.00927242 6.10304017 0.49814873 4.82010746 9.56247236 9.79585930 8.91603111 8.76340294 10.04828415 10.50473856 7.63772978 11.36133253 14.43429520 7.99797148 12.14293634 10.09623128 10.97930543 4.40506656 5.70763246 7.68470585 9.67559825 NA 10.16942498 4.00067610 5.38895064 4.82010746 7.85865990 12.18730314 10.43530730 10.64156192 12.08970109 8.29259450 11.02043331 10.48212244 10.16292223 10.06993144 2.61364952 10.57543950 10.92479291 NA 10.60583172 9.09809158 4.30621849 4.77119892 11.02369954 9.19861840 10.57098123 9.56157378 1.91322453 6.55707306 11.33370286 10.52331828 9.38793610 10.59401522 0.000000 0.021183 -0.383920 -0.272120 1.283900 0.033690 0.348920 0.286750 2.738400 0.111690 0.948540 -0.324490 0.032704 -0.703250 3.501800 -0.708540 0.324470 0.334480 -0.708090 -0.334330 -0.326810 0.309530 0.309530 0.361490 -0.313790 -0.313790 -0.308390 0.365430 -0.692240 0.016286 -0.325420 -1.063400 2.530000 0.016565 -0.352250 -0.352250 0.348920 0.286750 0.324470 -0.343770 0.011400 -1.120300 -0.342120 -0.342120 -0.342120 -0.331100 0.032704 0.032704 -0.328780 -0.714620 -0.708540 -0.708540 0.097179 0.064495 0.055253 -0.708090 -0.334330 -0.334330 0.034818 -0.707210 -0.691330 0.309530 0.043865 -0.313790 -0.311320 0.042590 0.704200 -0.324490 -0.689790 -0.334 0.000 -0.702 -0.702 0.000 0.000 -0.708 -0.334 0.000 -0.332 -0.689 -0.382 0.310 -0.313 0.000 -0.314 -0.314 0.000 0.000 0.000 0.323 0.704 -0.699 0.000 -0.351 -0.731 -0.731 0.000 0.000 0.000 0.000 0.287 0.287 -0.344 0.000 -0.143 0.949 -0.342 -0.342 0.000 -0.119 -0.334 0.000 -0.702 -0.702 0.000 0.000 -0.708 -0.334 0.000 -0.332 -0.689 -0.382 0.310 -0.313 0.000 -0.314 -0.314 0.000 0.000 0.000 0.323 0.704 -0.699 0.000 -0.351 -0.731 -0.731 0.000 0.000 0.000 0.000 0.287 0.287 -0.344 0.000 -0.143 0.949 -0.342 -0.342 0.000 -0.119 8.63431555 -0.08681377 6.09312490 11.58873229 11.51800109 9.32449426 11.17707228 7.55389496 9.58742613 NA 11.79547715 11.59248521 4.74610850 2.37264570 4.37264570 7.91321615 3.30553283 10.82722757 10.14083220 10.53572571 9.40707164 0.49814873 8.24860646 10.67684354 7.08814160 5.08314102 2.82009725 NA 9.13238482 6.85573063 7.59621063 7.30553374 5.04249989 11.79620310 9.79203345 2.91322453 10.06232817 NA 6.67476711 11.46396304 9.70681957 8.05020727 NA 5.82010746 8.11288880 2.37264570 5.18000460 1.91322453 5.73339502 7.64884002 3.49817426 11.57120451 1.72058492 6.35615966 11.06898318 10.22779943 5.25306649 9.44362260 12.29151110 7.56067445 4.19861987 3.95760820 13.30022382 3.37264570 NA 2.49817426 1.91322453 14.450004 7.047643 9.799675 13.738026 9.507541 10.725394 12.534238 11.470441 8.293309 9.581215 12.182927 11.999850 7.684706 8.421011 3.235145 7.867413 11.103658 10.9572688 12.8471835 5.7461058 13.1116582 8.8890643 6.5997165 9.7996749 9.4953582 10.5430009 7.3602993 9.5579739 10.2435729 7.9328071 3.0831453 9.5233183 9.2192779 8.1270740 9.7516323 10.0289101 10.3659722 7.6101840 10.2547350 8.6880034 6.9132162 12.9244618 8.9160311 10.7289998 9.8746659 11.7269974 9.0072939 10.4155508 10.4972392 7.5856416 0.4981487 9.0193080 6.2795382 9.6755983 7.3767410 10.1694250 5.2351450 11.3308051 7.8586599 7.3522995 13.5645483 9.7851216 9.1986184 11.6855308 11.4816474 2.7205630 1.9697860 10.0943684 9.0046517 9.2685673 TCGA-LL-A8F5 61 0 NA 596 breast stage iia t2 n0 (i-) mx female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 1 2 5 5 2 9 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.07085995 8.60278162 10.56530690 6.31738005 9.52888344 8.04959156 7.82433954 10.15757760 11.72117632 12.79492466 9.71691032 9.81176129 0.06942721 11.40985836 2.52887133 13.35398683 5.95209589 8.73833686 9.33974714 2.97634530 NA 11.79289951 7.35947110 10.19611115 10.23121362 6.33623875 4.39138280 12.53603823 11.15126813 -0.93043530 8.81764468 8.35022274 NA 8.05244524 7.60861041 9.10149749 8.36636812 8.33389463 8.20130892 9.76119533 4.19873773 6.06945084 14.80873147 6.73044568 9.53705742 9.02510190 9.25680405 5.33623696 1.65443554 8.55326757 11.43932180 NA 10.02727945 4.97634072 5.97634301 5.04673114 7.36407248 11.75944986 10.75463868 12.14509815 11.95304977 8.28619779 10.12337780 9.72319265 9.90786799 9.78884066 2.75540037 11.99834033 8.28862018 0.06942721 10.50147169 8.06380545 3.31737643 4.27890659 11.17044269 9.13284696 10.41152656 9.02219301 3.31737643 7.49571675 12.04296988 11.75748360 9.44666234 9.42700395 0.6412300 -0.1771500 0.7269700 1.2439000 0.0000000 0.7177400 -0.2278400 -0.3893900 -0.3932000 1.1022000 1.1040000 1.0761000 -0.3653500 -0.3863700 -0.4590600 -0.8009400 0.2609200 -0.2836800 -0.1100100 -0.1877200 0.4123000 -0.4412300 -0.4412300 0.0616610 0.2370700 0.2370700 0.0526780 0.0582340 -0.4075900 -0.3766100 -0.3933900 -0.3907300 -0.4030600 -0.3846900 -0.3580500 -0.3580500 -0.2278400 -0.3893900 -0.5998300 1.8909000 0.3873500 -0.3915100 0.1554800 0.0509710 0.3408100 0.3364300 -0.3113100 -0.3649800 -0.4016600 -0.4590600 -0.7900800 -0.3968500 -0.5437000 -0.3912900 -0.0028989 -0.0960340 -0.4153000 1.0470000 -0.3945200 0.5175300 -0.4412300 0.7059000 -0.0125650 -0.5239900 0.1933100 -0.4162900 0.1469800 -0.1752400 0.6113700 0.226 -0.316 -0.397 -0.397 0.000 0.000 0.000 -0.384 -0.377 -0.077 -0.539 -0.441 0.000 0.367 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.406 0.221 0.000 0.000 -0.342 0.363 -0.403 -0.403 0.718 0.313 -0.389 -0.389 0.000 0.000 -0.393 -0.393 0.000 0.000 0.000 0.000 0.226 -0.316 -0.397 -0.397 0.000 0.000 0.000 -0.384 -0.377 -0.077 -0.539 -0.441 0.000 0.367 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.406 0.221 0.000 0.000 -0.342 0.363 -0.403 -0.403 0.718 0.313 -0.389 -0.389 0.000 0.000 -0.393 -0.393 0.000 0.000 0.000 0.000 8.71330815 NA 7.34091471 11.36148584 11.14660139 7.50128388 11.25618515 6.82914047 9.76231144 NA 13.32602917 12.83060208 5.65441549 NA 0.06942721 7.20900294 3.39138280 12.00664176 11.03307048 10.64215208 9.70516996 3.59301906 8.73300990 10.50251569 8.39588154 3.52888383 NA 0.06942721 9.31619259 1.39138280 8.26912434 8.13284671 4.56130780 12.33082844 9.87438955 0.06942721 11.95800489 6.59301457 6.92743310 12.51627673 9.24187950 14.18794691 -0.93043530 2.39138280 8.11384581 4.49571435 3.87681159 -0.93043530 5.76989072 2.23936749 4.31737643 12.18026142 NA 9.54417180 10.37608327 9.79567004 5.63930742 9.92432024 12.81134015 8.28134031 4.31737643 4.76989337 10.17470564 3.46176427 6.66936415 1.06942721 8.68967167 10.795670 9.036678 8.077881 11.409858 9.558296 10.730339 2.976345 8.221737 7.720504 10.030902 12.612967 11.803738 8.553268 7.780258 2.069462 7.382335 9.291039 10.025828 13.332574 3.239383 13.899818 8.035236 6.069451 7.608610 8.239377 9.086344 6.850812 7.949035 9.716910 12.247806 3.239383 10.095975 8.483080 9.047204 11.234673 10.000189 11.155588 7.680477 9.827675 4.927432 10.004617 11.025665 8.366368 10.134868 10.067337 9.245625 10.303072 10.269124 10.485194 7.435774 2.654413 9.661703 8.684806 11.439322 10.660507 10.027279 8.660039 10.697897 7.364072 7.902342 13.829236 10.702901 9.420391 12.926364 10.826842 2.391383 2.654413 9.220469 9.835152 9.839290 TCGA-LL-A9Q3 69 0 NA 532 breast stage iiic t3 n3a mx female 2013 NA yes infiltrating lobular carcinoma 28 white not hispanic or latino NA NA 2 2 2 2 1 2 3 8 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.2228186 8.4188165 10.6469815 6.0926197 9.2954149 8.6194306 9.9539137 9.0778505 11.6033476 9.1072398 9.1781957 10.2270844 3.6596620 13.6557103 2.1857397 10.8888639 7.4294327 7.2301233 9.9309369 13.1869030 -0.9842170 13.7184641 3.3377396 9.8768914 9.9030250 7.9700006 NA 9.9937997 12.1888569 0.6007455 7.7806762 5.0601987 NA 1.6007455 8.7283314 8.8311878 8.5913436 8.3601004 8.6487998 10.3309540 12.6680892 10.8984474 14.9623224 5.4017533 11.2530084 11.7790168 9.4721587 5.2252595 3.1857239 6.8359834 9.5703933 NA 8.9656311 4.2252595 4.8737837 4.4420677 9.0353952 11.3692270 10.8065602 10.8239642 11.6795849 8.9844712 10.1450874 9.0642912 9.5932333 9.6415133 2.8231583 10.6226722 8.8799906 -0.9842170 10.5300253 8.2228186 2.6019579 4.1032710 9.7538966 9.0367844 10.3349120 8.9859102 3.4081276 10.0444012 10.6460715 11.6049874 7.3733568 9.3354766 1.11390000 1.10720000 0.00917050 0.00069327 -0.01766600 0.38287000 -0.01395300 -0.01188700 2.72530000 3.65690000 0.76121000 -0.00318590 -0.00318590 0.00110930 -0.00456950 -0.00456950 -0.00443120 -0.00619230 -0.00595220 -0.00110870 0.78408000 3.65690000 -0.02205800 -0.03737900 0.61516000 0.61516000 0.60196000 -0.00719580 -0.40074000 -0.37008000 0.00000000 -0.74775000 -0.01766600 -0.01954800 0.38287000 0.38287000 -0.01395300 0.00122600 0.00069327 0.74271000 0.73549000 -0.78070000 0.00736090 0.00736090 0.00736090 -0.05145100 -0.00318590 0.01014600 -0.00373950 -0.00456950 -0.00456950 -0.00456950 -0.00443120 0.00041593 -0.00954260 -0.00885260 -0.00110870 -0.00110870 -0.00415460 -0.00553750 -0.77761000 -0.02205800 -0.33871000 0.61516000 0.60196000 -0.00719580 0.00805670 -0.02630400 -0.02630400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.464 0.000 -0.756 0.000 -0.339 -0.339 0.615 0.615 -0.370 0.719 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.383 0.383 0.000 0.000 0.743 0.743 -0.012 0.758 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.464 0.000 -0.756 0.000 -0.339 -0.339 0.615 0.615 -0.370 0.719 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.383 0.383 0.000 0.000 0.743 0.743 -0.012 0.758 0.000 0.000 0.000 0.000 8.7639974 NA 7.4504327 11.2790736 12.1593471 8.9793220 11.2837615 5.7930921 10.7755928 2.8231583 12.7395720 11.7092064 3.8231583 2.6007693 0.0157830 7.4793284 4.6596620 11.0347000 11.2440219 10.4059733 9.9472807 0.6007455 6.6378565 10.7694390 6.8167047 6.8612941 NA NA 9.2446231 2.7162447 7.2589786 7.5894519 7.1243292 9.5452056 9.3195852 2.0158187 8.7454253 NA 7.1957137 12.1986643 8.2373916 8.1217127 -0.9842170 3.9226926 7.0601987 NA 3.7706916 NA 4.8984454 7.1399258 3.0158008 10.8319881 1.6007455 5.4587495 10.8167043 9.5588362 4.6007693 9.6110619 11.8955791 9.0129840 4.6305161 4.2252595 11.4933097 2.0158187 NA 1.8231787 3.3377396 11.035430 5.835982 8.519630 13.655710 9.993800 10.933176 13.186903 12.533228 8.639869 9.077850 12.880861 10.874951 6.835983 7.780676 2.716245 6.254209 8.674016 10.705366 13.030609 4.145090 12.640706 8.213021 5.408121 9.000223 6.666856 9.744890 7.021429 10.591344 9.178196 7.554963 8.507657 10.279660 5.103267 6.513975 9.674908 9.924197 10.883469 7.919686 10.491031 6.674016 4.630516 9.828447 8.591344 10.769857 10.192601 10.117124 9.309276 9.827982 10.312721 7.150231 9.597005 10.455801 5.507658 9.570393 4.946544 8.965631 5.491539 10.744575 9.035395 6.730050 13.516522 11.019674 10.645161 12.093288 11.403553 3.015801 NA 9.008743 9.543281 9.183222 TCGA-LQ-A4E4 73 0 NA 849 breast stage iiia t3 n1a mx female 2011 NA yes infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 2 2 2 2 6 2 3 8 2 2 0 0 0 4 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.838026e-06 5.895554e-07 11.1111111111111 50 5.55555555555556 20.8333333333333 12.5 8.934415361 9.315978251 11.214566531 8.919633562 8.375684589 9.730168660 11.321330323 9.134577770 10.098937958 8.888089627 7.523783048 10.280551798 0.581303036 12.741244940 3.244232524 8.707112334 6.675786298 8.244233475 9.833934008 13.506452042 2.166233395 13.119053146 8.675786298 8.901572590 11.400915397 4.353859614 NA 10.231009682 10.185512888 1.803640357 7.569953556 5.696745021 NA 2.803661020 9.503109379 10.661197697 9.586893067 10.493159847 10.456249880 11.826425066 3.166233395 11.151124134 13.935196410 7.432934360 11.994720146 10.543200447 10.100904739 5.737773277 4.166233395 7.588763349 11.111024398 -0.003755892 10.671380955 4.550894510 3.166233395 4.040699591 9.460851687 12.077955877 10.205759411 10.817681450 12.904229432 8.351657036 9.760348208 10.158697408 11.342265607 10.730168745 4.724224603 11.449319375 10.741139899 NA 9.963532212 8.724226309 5.423578171 4.083766508 10.814089174 10.178700327 10.818876837 9.673144565 1.996316429 9.512991061 12.958027015 11.686740592 10.651389447 9.522805323 0.02328600 0.80305000 0.01670500 -0.01174900 -0.02041200 0.07383300 -0.00069303 -0.03288700 0.01373500 0.01373500 0.01373500 0.02763800 0.02763800 -0.82814000 -0.82814000 -0.82814000 0.01558700 0.01558700 -0.01312700 0.02230400 -0.05698100 0.10482000 -0.78732000 0.86672000 0.08652200 0.08652200 0.08652200 0.10862000 -0.78243000 0.02328600 0.01768400 0.01670500 -0.02041200 -0.02041200 -0.01807800 -0.01807800 0.05282700 -0.00069303 -0.01505400 0.00666530 0.00000000 0.01373500 0.04273200 0.04273200 0.04273200 0.04273200 0.02763800 -0.82660000 -0.81876000 -0.82814000 -0.82814000 -0.82814000 0.01558700 0.01558700 0.01558700 -0.85146000 0.02230400 0.07858200 -0.07641200 -0.75245000 -0.79928000 0.05138700 -0.83365000 0.08652200 0.08652200 0.07340200 0.02679500 -0.78841000 -0.78631000 0.000 0.000 -0.828 -0.828 0.000 0.000 0.000 0.000 0.000 0.056 -0.798 -0.799 0.000 -0.834 -0.834 0.000 0.000 0.000 0.744 0.000 0.000 0.000 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.128 -0.128 0.000 0.000 -0.828 -0.828 0.000 0.000 0.000 0.000 0.000 0.056 -0.798 -0.799 0.000 -0.834 -0.834 0.000 0.000 0.000 0.744 0.000 0.000 0.000 -0.786 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.128 -0.128 8.395049514 2.166233395 7.371345405 10.596683618 11.293795500 8.456454630 12.637228759 9.061641479 8.603636359 -0.003755892 12.090713660 11.362674693 3.166233395 4.640163941 4.281705668 7.405697155 1.996316429 9.575621873 10.847664685 10.883907451 9.368082758 6.115247616 8.401447439 9.771093087 5.300087107 7.569953556 0.996316429 NA 9.492161039 8.032479435 7.696745717 7.519868166 6.625662092 11.595900443 9.887330146 1.996316429 9.679300631 -1.003755892 8.618357970 12.066762437 10.414685764 7.029728942 NA 0.581303036 8.140964195 NA 3.996307389 NA 1.318230060 5.724227332 -0.003755892 10.521826837 NA 6.186130091 10.848055061 9.793156858 3.318230060 10.261334998 10.865514299 6.996306259 2.166233395 2.803661020 11.475075659 -1.003755892 NA 0.581303036 2.996298349 10.790823 6.253694 8.550895 12.741245 10.382061 10.749941 13.506452 12.953408 8.156177 10.174348 12.021273 8.203320 7.588763 8.297802 1.996316 7.380010 10.860492 11.614920942 13.202251968 7.205759045 14.155742214 9.078455063 3.166233395 8.787469033 8.638357713 11.032713181 4.950501075 8.418370864 7.523783048 9.263092638 -1.003755892 11.331417198 8.496151928 8.515686830 9.279394451 10.461362185 10.995601394 7.140964706 8.015896707 10.282863826 3.083775016 10.490911631 9.586893067 10.568532563 9.883526582 11.823648745 9.505091217 10.404635793 11.125911031 7.888089931 NA 9.904135575 8.576677827 11.111024398 0.581303036 10.671380955 5.062393746 10.634289317 9.460851687 7.380009895 13.753070811 9.445454625 9.533524415 11.412311822 11.149541368 -0.003755892 NA 10.385399543 10.175593087 10.569006256 TCGA-MS-A51U 44 0 NA 681 breast stage iib t2 n1 m0 female 2012 NA yes infiltrating lobular carcinoma 2 white not hispanic or latino NA NA 3 3 2 2 3 3 4 3 2 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.467973e-07 1.387189e-07 21.4285714285714 14.2857142857143 0 28.5714285714286 35.7142857142857 10.32030449 9.44052807 11.63147975 8.93613114 8.39206665 8.99336443 11.16181199 9.94608325 11.12992796 11.30670238 11.71220137 10.28394457 3.52058568 13.49968164 2.23106370 9.73180590 6.98596258 8.58862657 10.00659355 12.88481545 5.34655274 13.94632171 6.53688283 10.19925506 10.01243431 9.59155601 -0.93898423 9.57191378 7.87493095 3.38308216 7.88769829 7.75463634 1.38305450 4.27060369 9.83840504 9.77968259 10.03986014 11.85901379 9.39765624 11.12858404 9.73974973 11.27819859 15.16965370 8.14462918 10.11235857 11.33115292 11.37318174 5.10554399 0.06115406 8.59642497 11.83531900 0.06115406 10.67309659 5.56894414 6.62339137 4.52057940 9.97104269 11.89027777 10.12387037 12.93122535 12.77496574 8.29955422 10.51596303 10.53609264 11.08247667 11.28273678 5.45346819 11.47054058 10.93920057 0.06115406 10.47371955 8.38533008 4.15242682 4.52057940 10.85759493 10.64470262 10.71130389 9.34307976 3.86850899 10.29117012 13.52377974 12.22479934 10.38814088 9.59545256 0.42873000 0.44122000 0.00000000 0.00000000 0.00638710 0.20855000 -0.21354000 -0.21354000 -0.00110870 -0.00110870 -0.00110870 0.19269000 0.19269000 -0.00816240 -0.00816240 -0.00816240 -0.01298900 -0.01376700 0.58820000 0.13583000 -0.01876500 0.14669000 0.16505000 0.16505000 0.30489000 -0.21750000 0.52171000 0.35871000 -0.02178400 -0.00105110 0.00110930 0.00000000 -0.00710160 0.00638710 0.20855000 0.18889000 -0.21354000 -0.21354000 -0.21354000 -0.00124730 -0.02622200 -0.00729320 -0.34939000 -0.33063000 0.23659000 0.18448000 0.19269000 0.19071000 -0.00816240 -0.00816240 -0.00816240 -0.00816240 -0.01298900 -0.01376700 -0.01376700 -0.22170000 0.13583000 0.10884000 -0.02095600 -0.26444000 0.14669000 0.16505000 -0.00069303 0.25308000 0.52171000 -0.24946000 -0.01381500 -0.04400900 -0.04400900 0.193 0.193 0.000 0.000 0.000 0.000 0.363 0.136 0.000 0.172 -0.093 0.147 0.147 0.000 0.000 -0.218 0.304 0.000 0.429 -0.213 -0.213 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.209 0.209 -0.214 -0.214 0.000 0.000 0.000 0.000 0.184 0.184 0.000 0.000 0.193 0.193 0.000 0.000 0.000 0.000 0.363 0.136 0.000 0.172 -0.093 0.147 0.147 0.000 0.000 -0.218 0.304 0.000 0.429 -0.213 -0.213 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.209 0.209 -0.214 -0.214 0.000 0.000 0.000 0.000 0.184 0.184 0.000 0.000 8.3395993 NA 6.2899691 11.4007213 11.3577791 8.3383210 10.8793324 9.2533438 9.4959447 3.6461166 10.9460833 11.0948514 4.6461108 3.1486088 4.7335767 7.7476499 3.7050047 10.5414350 11.3858928 10.7004904 9.2184966 6.0723760 7.7856637 10.6927815 7.7685086 5.9315152 -0.9389842 NA 10.2254281 7.5328250 7.1055440 8.3626457 9.0931954 11.1771946 10.4550764 5.3465527 9.0412893 1.8684892 8.4120888 12.9229151 9.8547529 7.7615891 NA 6.6977738 8.5469789 NA 3.7050047 3.3830822 5.7890693 6.1288522 3.5847100 10.0842109 1.3830545 8.5550051 9.8177059 9.5758637 5.8685040 10.3948640 12.8752314 8.3511685 3.9680447 3.9680447 10.4758349 2.5205731 NA 0.6460705 2.3830822 12.990352 3.584710 8.481110 13.499682 11.012405 10.494735 12.884815 12.360644 8.532825 10.324419 12.804932 10.862050 8.596425 8.143299 NA 6.470540 12.044500 11.57709583 12.09457268 6.86204962 13.33901530 8.90349989 7.21596781 8.74939985 7.45775433 10.31698087 7.67217426 7.35116893 11.71220137 6.70500610 4.84251126 10.77625371 7.69777451 6.82243444 11.55750415 10.51339086 10.75463660 9.44701212 8.91445928 11.75289319 6.77539563 12.88589265 10.03986014 10.27546876 10.07167781 10.99077792 10.33785568 10.00732489 10.91250833 8.89719988 -0.93898423 9.89637116 7.33139799 11.83531900 7.79924211 10.67309659 7.36948829 11.22472387 9.97104269 7.28515158 14.01657254 10.35289599 10.71489046 12.84353366 11.37856229 3.14860877 0.06115406 11.58642577 9.89562072 9.94837030 TCGA-OK-A5Q2 59 0 NA 64 breast stage ii t2 n1a mx female 2012 NA NA infiltrating lobular carcinoma 2 NA NA NA NA 3 3 NA NA 6 4 4 9 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 7 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 1.733986e-07 34.6153846153846 30.7692307692308 0 11.5384615384615 23.0769230769231 9.6181103 9.2699331 11.3246608 8.5727120 8.3041907 9.4881289 10.3536787 9.6809650 11.1755787 13.1467640 10.9978033 10.3599558 0.1904252 13.9479425 2.1904568 9.9881099 6.6823008 8.6209009 7.6250768 12.9199275 0.1904252 13.4437542 6.6929488 10.0352797 10.1251221 5.8722723 -0.3946005 10.3295691 8.9497818 2.0649173 8.8355063 6.7804112 -1.3944108 3.6929516 9.6395970 10.2362080 9.7392703 11.6411441 9.9115475 10.6678693 12.9070535 10.0847608 15.0023749 8.6859836 10.3532508 10.7891212 10.2770270 5.4634655 7.4352085 8.2636974 11.2470861 -1.3944108 10.6271599 6.0973390 6.5421234 4.5827667 9.9739923 11.8603669 10.5884795 11.3154312 12.5337266 8.5799004 10.8103626 10.3257301 10.7928379 10.6972518 4.4634655 11.1814977 11.6600902 -1.3944108 10.4770062 8.7615689 3.7746079 6.0973390 10.9101224 9.8045447 10.0401141 8.9285406 4.5596815 10.2325638 12.9506139 12.7214236 10.1142710 10.2712659 0.73986000 0.74651000 -0.00028975 -0.00193990 0.00235810 0.00097064 -0.00512270 -0.00512270 0.00332990 0.00332990 0.00750000 0.00027728 0.00027728 0.00652620 0.00652620 0.00652620 0.00166420 0.00166420 0.00041593 0.00624810 -0.00824050 0.01251600 0.01251600 0.01251600 -0.02137300 -0.02137300 -0.02884800 0.05167200 -0.17107000 -0.01312700 -0.00180140 -0.36102000 0.00235810 0.00305220 0.00097064 0.00097064 -0.00512270 -0.00512270 -0.00512270 0.00110930 -0.00013862 0.00332990 -0.00318590 -0.00318590 -0.00318590 -0.00318590 0.00027728 0.00027728 0.00652620 0.00652620 -0.37302000 -0.37302000 0.00166420 0.00166420 0.00166420 0.00041593 -0.08612000 -0.08612000 0.00000000 -0.36804000 0.01251600 0.01251600 0.00791750 -0.02137300 -0.02884800 0.00610900 -0.00373950 -0.00332430 -0.00332430 0.000 0.000 0.000 -0.358 0.000 0.000 0.000 0.000 0.000 0.358 0.007 0.000 0.000 0.000 0.000 0.000 0.000 -0.169 1.324 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.358 0.000 0.000 0.000 0.000 0.000 0.358 0.007 0.000 0.000 0.000 0.000 0.000 0.000 -0.169 1.324 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.2672638 6.1753410 7.9386410 11.2843060 11.4764285 7.5863392 11.7982410 9.0255828 9.3425894 0.6054943 11.1305172 11.3557909 4.0973411 1.4128357 3.1904410 7.9891901 3.6054825 10.6040763 11.3276530 11.0569546 8.9826965 3.7347638 7.7218299 10.6416595 8.6012530 7.2565380 1.4128357 1.1904252 10.6624622 5.9978027 7.0063654 8.1192135 7.5003033 11.2180572 10.4965101 4.2779104 9.5553125 1.4128357 7.6111104 12.7633065 9.5465335 8.6181105 NA 1.7754299 8.9652354 NA 4.9453361 0.1904252 6.7703930 5.8266858 5.1753410 10.7841507 3.0649173 8.3197313 10.5980702 9.5891920 6.0973390 10.1368673 11.8845160 8.8270730 3.8149400 4.8722723 10.6100575 1.1904252 -0.3946005 0.9274414 2.4128357 12.975157 6.291987 8.446264 13.947943 10.299408 10.994041 12.919927 10.578107 9.142597 10.090309 13.031620 11.115508 8.263697 9.725075 2.605494 7.312845 10.925722 11.1736795 12.5320598 6.5123770 13.7398713 8.9375224 7.7977789 8.9296664 8.8051583 10.3653116 8.2439218 7.7577707 10.9978033 6.8769491 0.9274414 10.0411562 9.5523921 7.3728094 10.6450903 10.6969212 10.7427972 8.0913153 9.1349163 10.1814978 7.0893011 11.4325328 9.7392703 10.1909179 10.1927946 10.8103626 10.4140479 10.0138156 10.4192671 7.7166213 9.1885686 9.5980490 7.4881285 11.2470861 8.3553555 10.6271599 5.3197299 11.1075718 9.9739923 7.3736700 13.9891227 9.8937752 9.9240286 12.6432044 11.1204464 7.2989726 3.6498798 9.9035484 9.7866382 9.6823015 TCGA-OL-A5D6 71 1 1104 NA breast stage iia t2 n0 mx female 2009 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 3 4 NA NA 2 6 2 3 2 1 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 9.01673e-07 2.774378e-07 29.4117647058824 23.5294117647059 2.94117647058824 14.7058823529412 29.4117647058824 8.81714580 9.13776197 11.36474160 8.15990766 8.47872958 9.69131693 10.69934436 9.31539686 11.96800098 13.32724475 9.52161555 9.89609728 2.49520907 14.06546169 8.99288822 10.92567037 7.27896047 8.20571116 6.14431155 12.17165579 NA 10.33212888 4.28371439 9.72485811 11.02624477 8.59420702 0.03576465 9.54556128 9.83830261 1.62072715 8.54753890 7.50746167 0.03576465 5.08018010 9.84314109 10.48286945 8.73449083 10.38506741 10.16635681 10.90151949 4.16506778 9.26219846 15.67259491 8.35392223 10.24826442 10.41786981 9.98342318 5.12324819 6.11260214 8.49726586 12.68256992 -0.96409462 10.77176527 7.00733007 6.55148679 4.89376506 10.00229170 11.36810257 10.26340219 12.41177591 12.47119605 7.33499456 10.03013961 9.53113170 10.60136438 10.84635784 4.08018010 11.55443939 10.29376326 -0.96409462 10.41245426 8.79899856 5.08061929 5.65049748 10.67014351 9.61792821 9.98707098 8.88909566 4.32118492 10.15731977 12.92548030 12.86986217 9.78565566 9.80810087 -0.00221680 -0.00263220 0.00506970 0.00506970 -0.00581400 0.01433000 -0.55256000 -0.00249380 0.03642300 0.03642300 0.03642300 -0.02562000 -0.02562000 -0.35897000 0.01265500 0.01265500 0.00110930 0.00624810 0.07512800 -0.53256000 -0.00470790 -0.52123000 0.01978300 0.02202400 0.00319100 0.00319100 0.00029375 0.03284500 -0.00221680 -0.00221680 -0.01050800 0.00506970 -0.00581400 -0.00581400 -0.00387790 -0.00387790 -0.55256000 -0.54623000 -0.55317000 0.04854600 0.04911400 0.03642300 -0.53561000 -0.53561000 -0.53561000 0.01363200 -0.02562000 -0.02562000 -0.35897000 -0.35897000 0.00458000 0.00458000 0.00110930 0.00624810 -0.00346270 0.07512800 0.01314200 0.01314200 0.00000000 -0.53226000 -0.52123000 -0.52379000 -0.53470000 0.00319100 0.00319100 0.01824300 0.00833510 0.03326700 0.03326700 0.000 0.000 -0.359 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 -0.521 0.000 -0.535 -0.535 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.000 0.000 0.000 0.000 0.000 -0.359 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.532 -0.521 0.000 -0.535 -0.535 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.536 0.000 0.000 0.000 8.0937778 5.4108261 5.8812755 10.8960973 11.8328397 8.0249823 12.0492834 9.1101954 9.3302462 1.3577209 12.5164502 11.4352511 2.9426834 3.8431397 3.5593450 7.1072485 8.2908146 10.0315533 11.5401087 9.9568833 8.4238034 2.8431397 7.8171461 11.1621680 8.0357861 13.7390950 5.0581520 NA 10.9783008 4.1650678 6.4620507 8.8447503 9.6823449 10.3574213 9.4515281 3.2057053 9.1390740 NA 8.3395668 12.6084865 8.1931330 10.2019493 -0.9640946 7.6282436 8.0719600 3.4281022 6.2354590 13.1927383 3.9426740 6.5728488 2.6207506 11.2175597 1.8431397 8.6814447 10.5554225 9.7055571 6.1547270 10.3520677 11.2955295 8.5671678 2.2057053 6.1018748 9.5817160 2.4952091 NA NA 10.0336713 12.3467511 5.4620523 9.5226212 14.0654617 10.3315552 10.9591137 12.1716558 10.1624907 8.6523352 9.8277630 13.1443923 10.9680009 8.4972659 10.4499429 0.6207741 8.1855336 10.6343040 11.46963241 13.01762104 6.28371439 15.09886357 9.01020079 6.98998253 8.33499412 6.67964195 10.27321129 6.84314094 8.16249053 9.52161555 9.00445308 4.46205232 10.38451439 4.79067301 6.53778216 11.33699658 11.14920283 10.98998253 8.25495490 9.14300329 8.99288822 5.08018010 10.07797223 8.73449083 10.35036950 10.14431065 10.09445448 10.38506741 8.94417880 10.56228546 8.09106878 0.62077407 10.61725045 8.73426523 12.68256992 6.45363939 10.77176527 7.22066176 11.47223750 10.00229170 6.74314601 13.89298969 10.53911508 10.75260569 12.20445835 11.14789990 0.03576465 0.03576465 9.69667357 9.83830261 9.07470532 TCGA-OL-A5D7 70 0 NA 1780 breast stage iia t2 n0 mx female 2009 NA yes infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 4 4 1 1 5 5 2 7 NA NA 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 1.24847e-06 4.161568e-07 11.7647058823529 25.4901960784314 5.88235294117647 29.4117647058824 27.4509803921569 9.16941746 7.44635301 11.53799454 7.59993590 9.12935695 8.94022461 8.36086464 9.85271785 12.82020109 12.08085046 9.94862056 10.11388708 2.25652763 10.98104198 -0.06537028 10.38323264 7.72901567 8.51956235 8.86829074 5.70278496 -1.06552124 10.01275079 7.40220542 10.54035271 11.00371410 5.25652763 3.68948927 12.95088601 11.31587260 -0.06537028 9.69282330 5.04312574 -1.06552124 5.10452537 8.59993590 7.82029642 8.82029642 8.40424195 8.33547924 9.85867015 2.10453795 9.53172143 14.51774157 8.07312774 9.66676742 10.28332813 9.70443783 3.74195230 6.27444991 8.36086464 8.51956235 NA 9.95280021 5.27445177 6.42645263 8.70112900 8.60702547 12.30923202 10.49014781 10.61847186 12.30023898 5.48918967 10.13243097 9.51391586 10.51391596 11.47254636 3.93460142 11.02438153 5.22000098 NA 10.43045506 10.19375474 2.43028527 5.16341822 12.41753399 9.39607941 11.84748935 9.82638371 -1.06552124 3.88879195 11.06645695 11.58160866 10.10702754 9.71349856 1.0371000 0.3685400 0.1626500 0.0504470 -0.0478010 -0.2072200 0.0908650 0.0545180 -0.4763800 0.6408500 3.0347000 2.2951000 0.0518140 0.0097276 0.4510500 0.2981900 0.2915100 -0.1917400 -0.3871600 -0.3729000 -0.4216700 -0.2609500 -0.2609500 -0.2173800 0.0567980 3.6569000 -0.4364800 0.0112610 0.0660860 -0.3647000 -0.6429300 0.2062600 -0.4927700 -0.6119100 -0.2072200 -0.5864700 0.0708170 0.0545180 0.5962000 0.1252000 0.1722600 -0.4763800 0.3183500 0.5517700 0.0452820 0.0167050 0.0518140 0.0318590 0.0097276 -0.0851920 0.2236000 -0.4658900 -0.5838200 -0.2354500 2.4713000 -0.3871600 -0.4133300 -0.4133300 -0.3961900 -0.1945000 -0.2609500 -0.2173800 -0.0908770 -0.4381000 -0.4364800 -0.0878440 -0.0265770 -0.3841400 -0.4191500 0.000 0.000 0.000 0.000 -0.192 -0.192 -0.387 -0.373 -0.421 -0.200 -0.200 -0.261 -0.261 0.619 0.000 -0.408 -0.408 0.025 0.133 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 -0.612 -0.612 -0.207 -0.207 0.000 0.000 0.125 0.125 0.164 0.641 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.192 -0.192 -0.387 -0.373 -0.421 -0.200 -0.200 -0.261 -0.261 0.619 0.000 -0.408 -0.408 0.025 0.133 0.000 0.000 0.000 -0.419 0.000 0.000 0.000 0.000 -0.612 -0.612 -0.207 -0.207 0.000 0.000 0.125 0.125 0.164 0.641 0.000 0.000 0.000 0.000 9.3183044 -1.0655212 3.0220659 11.9368876 11.5073003 7.3025393 10.8122676 7.8541191 8.8530756 -1.0655212 11.9547119 12.4087141 4.4264526 NA 1.9345920 9.9211532 3.6350346 10.3418678 11.3513975 11.1057768 9.2452128 2.1045380 9.3301342 11.2343804 7.7451714 4.4264526 NA NA 10.3236935 3.5784557 7.7579673 9.0180794 8.0613048 10.7445248 10.4527614 2.1045380 10.8902499 3.7419523 7.2655166 12.3765067 8.4949328 6.7925808 NA 4.4891897 8.3074650 0.9346297 1.5195419 NA 7.3775437 4.7245902 4.4891897 11.0522431 5.8294183 9.2954471 11.0600135 10.4314538 6.9789941 10.7623397 12.9757458 7.6211002 4.8887968 4.9118785 10.0006892 2.5195671 2.3940202 3.7925847 10.3816832 10.867143 12.856069 8.194343 10.981042 9.594596 11.391981 5.702785 10.003378 9.461099 10.131817 12.702474 14.194601 8.360865 8.019408 6.283327 7.798786 10.299282 11.9204420 11.7668967 4.7674906 12.9276215 7.8917023 7.1293572 11.1727061 8.7011290 10.8027743 8.6017117 6.2921523 9.9486206 12.5740538 0.9346297 9.2315162 6.8653374 10.3443144 10.5451635 11.8936964 9.7619428 8.0792581 10.9700865 5.5195639 7.7956871 10.8655406 8.8202964 10.7591611 11.4744858 11.5822833 12.0501314 9.3991457 11.1268929 7.4853471 NA 9.4796030 6.2474832 8.5195623 8.8429927 9.9528002 2.9345920 12.3940611 8.6070255 7.2383809 14.0746309 11.3033793 9.8041938 12.9622469 12.3204624 6.4264526 0.5195419 8.4949328 7.9817237 9.4123583 TCGA-OL-A5D8 40 0 NA 973 breast stage iib t3 n0 mx female 2009 NA yes infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 3 2 2 2 1 1 6 8 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.548757e-07 2.774378e-07 28 12 4 28 28 9.7332130 9.0548607 12.4394649 7.4266254 8.1856173 8.3408956 11.0514912 9.8457754 10.5849438 12.8400093 7.6686999 10.3228414 3.1185092 13.0913462 2.1856129 8.3167730 8.0638076 7.5303166 10.1147413 13.0539489 5.6210027 15.3912718 0.7262209 9.6768000 11.5988606 4.8136478 -0.2738663 9.3700420 9.6745530 -0.2738663 7.7205391 6.1937915 NA 3.5335384 9.3509812 9.7339139 6.2418859 12.5095933 9.9209426 11.0930544 2.9741071 12.7045387 14.6617192 9.9308730 10.6814688 9.1628973 10.8235595 5.4943708 6.9209423 8.2536627 9.5270856 -1.2736919 10.1001384 3.3700387 5.0837367 4.0115851 10.0848369 12.1384910 10.6807456 11.7409037 13.3147833 8.7247761 10.8951712 10.1766495 10.1840795 11.0815368 4.6088270 13.0042722 8.7290007 -0.2738663 10.7244236 8.8631768 4.3569959 4.3408969 10.1275986 10.0610177 9.6368285 9.6970106 -1.2736919 9.7664754 12.5109228 10.1429833 10.4100576 10.3026701 3.65690000 -0.00622860 -0.00083160 -0.00595220 -0.02096100 -0.00027724 -0.01312700 -0.01312700 0.71660000 0.71660000 1.44590000 0.01181800 0.01223700 -0.00387790 -0.00387790 -0.00387790 0.01516800 -0.00083160 0.01293400 -0.01243800 -0.00013862 -0.74629000 0.00569190 -0.00908730 0.01251600 0.01251600 0.01251600 -0.00498440 0.00763920 -0.00401620 -0.75193000 -0.00595220 -0.02096100 -0.02096100 -0.00027724 -0.00027724 -0.01312700 -0.01312700 -0.01312700 0.00000000 0.00000000 0.72489000 0.00013863 0.00013863 0.00249690 0.00249690 0.01223700 0.01223700 -0.00387790 -0.00387790 -0.76372000 0.00180300 0.01516800 0.00763920 0.00763920 0.01293400 -0.01243800 -0.01243800 -0.00013862 -0.77964000 -0.74629000 0.00569190 0.01181800 0.01251600 0.01251600 0.00402430 0.00597000 0.01335300 0.01335300 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.004 -0.754 -0.746 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.717 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.004 -0.754 -0.746 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.717 0.000 0.000 0.000 0.000 7.8189432 7.4161836 4.6330766 11.7365390 12.7855302 8.6233958 12.6358914 9.9616735 9.7060396 0.7262209 11.8156362 11.5894506 7.1185030 -1.2736919 4.7922775 8.1334536 4.0481141 10.3486952 11.2536627 10.5610518 9.9276971 2.4266136 8.3790309 10.4069848 6.7261855 3.9356389 -0.2738663 NA 10.5479597 6.3111489 5.4676512 8.2260316 7.4266254 12.0715605 10.3228414 3.4810793 9.2653445 NA 5.8451262 12.3623572 10.3021976 8.7527091 NA 6.2653450 8.0615759 4.1524512 3.9741163 -1.2736919 5.3700422 5.1867660 2.8961168 10.4209789 NA 5.2180372 10.0974179 9.4600485 5.0115896 10.0356621 13.6710808 7.4777299 3.7705754 4.5335384 14.3234527 6.0749143 -1.2736919 2.1856129 0.7262209 12.7677628 4.8759324 8.6598764 13.0913462 9.8490138 9.8340567 13.0539489 12.7994905 9.2178986 10.0804352 15.1835025 8.8644576 8.2536627 8.7304063 0.7262209 7.0345250 10.5515421 11.7004211 12.5808594 6.9405051 12.5735348 8.4743784 5.0481141 10.3749927 8.0435982 10.9577190 6.9741128 9.3242382 7.6686999 6.6450488 1.8961168 10.3799265 11.4436480 6.8708948 9.3288847 10.4472849 10.2793350 9.8373214 9.7388102 11.2147791 5.0837367 10.5025612 6.2418859 10.4827421 10.5120469 11.2967531 9.7443860 10.0452933 10.5543223 8.1937915 NA 8.9407599 6.1937915 9.5270856 5.1355759 10.1001384 5.4810729 12.3277650 10.0848369 6.6210042 13.1599668 10.3600891 9.3932973 12.8608527 11.9197111 2.0480967 0.3111543 9.9918009 10.0069565 9.9568067 TCGA-OL-A5DA 61 0 NA 1783 breast stage iia t2 n0 mx female 2009 NA no infiltrating lobular carcinoma NA white not hispanic or latino NA NA 5 5 5 2 4 4 3 4 2 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.352509e-06 5.548757e-07 16.3636363636364 58.1818181818182 1.81818181818182 12.7272727272727 10.9090909090909 9.7724843 8.9145890 11.9743266 7.4081514 8.4870819 8.6776383 10.6450839 9.4256815 11.1439703 9.7051743 11.4171623 10.4639378 4.4601135 13.3625186 3.3171593 8.8367933 8.3615513 8.6300399 8.8289098 13.4008026 1.9021122 14.5316533 4.9801213 9.4952574 11.0433752 4.7545615 0.3171883 9.5192401 8.4081518 1.3171304 8.3209093 6.1245122 NA 2.4326388 9.5515754 10.2094469 9.1864939 12.2362687 9.6725081 10.7854417 12.5395495 12.2715957 14.8745809 6.7309537 10.8974156 10.0164403 10.9881083 4.8196580 3.9021218 8.2459220 10.7215891 NA 10.5257979 7.3760507 5.2713547 3.2557575 9.5061580 12.1019282 10.8475634 12.1328072 12.5646890 8.7251327 10.9340122 10.6893728 10.8646943 10.6266334 3.5395435 12.4752407 13.2284242 -1.2677742 10.4421399 9.0302572 5.2004533 3.6863885 10.0524310 10.0513021 10.1261212 9.7955897 4.3171593 9.0974233 12.7237164 13.1710514 10.5229503 10.4107947 0.7373900 0.7618300 -0.0065050 -0.0199050 -0.0129430 0.0562280 2.3557000 3.6569000 0.6217000 0.6217000 0.6371900 0.0134920 0.0169850 0.0197830 1.4924000 -0.1393600 -0.0012473 -0.0012473 -0.1428400 0.0024969 0.0308730 -0.7209300 0.0195030 0.0195030 0.0234260 0.0234260 0.0234260 0.0444320 0.0150280 0.0150280 -0.0030475 -0.0065050 0.0632230 -0.0129430 -0.0099565 -0.0099565 -0.1361300 0.4098500 -0.1680200 0.0000000 0.0411750 0.6217000 0.0065262 0.0065262 0.0065262 0.0401850 0.0169850 0.0169850 0.0197830 1.0214000 -1.2929000 -0.7347700 -0.0012473 -0.0012473 -0.0012473 -0.1428400 0.0024969 0.0024969 0.0308730 -0.7142600 -0.7209300 0.0195030 0.0192630 0.0234260 0.0234260 0.0444320 0.0049391 0.0522410 0.0522410 0.000 0.000 0.000 -0.663 0.000 0.000 -0.143 0.000 0.000 0.000 -0.714 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.310 2.310 0.000 0.000 0.622 0.622 0.000 0.000 0.633 -0.297 0.000 0.000 0.000 -0.663 0.000 0.000 -0.143 0.000 0.000 0.000 -0.714 -0.721 0.000 0.000 0.000 0.000 0.000 0.000 0.722 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 2.310 2.310 0.000 0.000 0.622 0.622 0.000 0.000 0.633 -0.297 8.3171571 NA 5.6148364 11.5619173 10.9628155 7.1004395 12.0418130 7.6866525 9.4314721 NA 12.3814508 11.1092017 5.1072359 1.9021122 4.2240480 8.2887005 3.3760542 10.3100954 10.5467770 10.7878160 9.6025593 2.0541191 8.3832464 10.6102455 6.0720436 4.3760542 -1.2677742 NA 9.7490029 5.2867851 5.8717451 7.0175968 7.4291623 11.7081858 10.8381031 3.3171593 9.0199070 0.3171883 7.5233573 12.7960952 9.3302471 7.7793182 -0.2677742 2.1916258 8.5698226 NA 4.6390874 -1.2677742 6.0450781 6.7041983 2.8196477 9.9925261 0.7322258 7.5901753 11.0979702 9.5298561 5.4186959 9.6025593 12.7505686 7.5994733 4.5395497 3.8196580 10.4537211 3.1245101 NA 2.1916258 1.3171304 13.998403 5.346904 8.456708 13.362519 10.117442 10.168906 13.400803 12.311275 8.958607 10.184951 13.140524 10.601017 8.245922 12.053700 -1.267774 7.574545 11.110489 11.5772925 11.9863374 7.1202120 13.8352750 8.9777473 5.9895818 9.8582537 7.7901862 10.7622581 6.4937466 5.5776856 11.4171623 8.4291619 4.4046171 10.3288503 8.8116794 6.1653211 10.4477276 9.9723897 10.1077770 7.9848599 9.3850395 9.7258407 4.6863885 12.3969518 9.1864939 10.5583458 11.0453611 10.6555220 9.4369628 10.1479364 10.3679127 7.2439470 NA 9.0101910 6.2713528 10.7215891 4.8614790 10.5257979 6.0083188 11.5174427 9.5061580 6.4601151 14.1382667 10.0875457 9.7286680 12.6388973 11.9889930 -0.2677742 2.5395559 10.0462112 9.0210607 9.9014932 TCGA-OL-A5RU 63 0 NA 1219 breast stage iia t1c n1 mx female 2010 NA yes infiltrating ductal carcinoma 1 black or african american NA NA NA 3 3 4 3 4 4 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 1.040392e-07 36.3636363636364 22.7272727272727 4.54545454545455 31.8181818181818 4.54545454545455 9.72783232 9.02739267 11.66991050 8.52708011 8.76053135 9.52623513 11.53171826 9.84087641 11.24482874 14.18559258 10.92757961 10.70112865 3.03690769 13.72989782 2.11093112 9.77411826 6.42561204 8.12660949 8.60916692 12.88660848 0.08174865 13.12032466 5.83338095 10.00952941 10.74645268 9.25046731 -1.21089678 11.99186923 10.50237436 1.37395439 8.42198317 6.49634730 NA 5.55717111 9.91181575 9.23089444 9.84494800 10.96047739 9.51520604 10.70785105 1.37395439 11.65819604 14.86222981 8.28358337 10.03394616 10.88701989 10.22673983 4.85507776 5.44719897 7.95137914 10.83201512 NA 10.24739447 5.51690710 6.75477262 4.37394744 9.60597151 11.74790298 10.60397075 11.62760087 12.84257435 8.05811460 10.20472959 10.27193685 11.20182227 10.43554651 4.64696905 11.44384754 12.00163616 1.95891690 10.29579120 8.53550207 3.81179981 6.28084128 10.42470589 9.84019680 10.66396915 8.85776613 4.69587692 10.22413713 13.65930436 12.65684568 10.14763907 9.61950307 0.90890000 0.91137000 -0.00027724 -0.00027724 0.00055459 0.00000000 0.00360760 -0.03526800 0.01098200 0.01098200 0.01098200 0.00000000 0.00000000 -0.00304750 -0.00304750 -0.00304750 0.01684500 -0.00180140 -0.04292400 0.00722170 -0.00805570 -0.00968060 -0.00968060 -0.00968060 -0.01766600 -0.01766600 -0.01766600 -0.00636680 -0.00263220 -0.00263220 0.00555290 -0.00027724 0.00055459 0.00166420 0.00000000 0.00000000 0.00360760 -0.03526800 -0.05023500 0.00124810 0.00124810 0.01098200 -0.00775230 -0.00775230 0.00110930 -0.01271300 0.00000000 0.00000000 -0.00932660 -0.00304750 -0.00304750 -0.00304750 -0.42462000 -0.00180140 -0.00180140 -0.04292400 0.00722170 0.00722170 0.00374650 0.00041593 -0.00622860 -0.00968060 -0.00330230 -0.01766600 -0.01766600 -0.01188700 0.00402430 0.00110930 0.00305220 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.909 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.909 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.7388144 NA 6.5898878 10.9772675 11.4660467 7.8446769 12.9035435 8.8279067 9.6259298 4.6218760 11.9846676 11.1166303 3.7431810 6.5438748 2.2484134 7.3242634 3.6958825 10.7755410 11.7011286 11.0970424 9.2308944 7.2319316 7.8948966 10.6628164 9.5703476 6.0927677 0.7890197 NA 10.8962049 6.3203691 6.6281918 7.9387351 6.3512308 10.8325927 9.9892734 3.5963389 9.0154000 -0.2110638 7.6562668 12.5845202 9.6376108 7.6281918 -1.2108968 5.7315010 8.6547212 6.1018706 2.9589169 0.3739544 7.3814452 5.9752496 3.1109144 10.3517073 2.1109311 7.6531740 10.7439111 9.6399560 6.0743898 11.1010199 12.4183444 9.2100006 4.5703476 4.4328459 11.4974251 1.1108977 NA 0.7890197 2.2484134 11.9908667 4.8975115 8.7547719 13.7298978 10.3344350 11.3051803 12.8866085 11.4064552 9.1152825 10.3007405 13.3833707 10.9579733 7.9513791 8.8030084 0.7890197 7.0651123 11.5200946 11.174850 12.390991 7.128838 13.542775 8.936193 7.838836 8.845626 7.400013 10.025708 8.746090 9.117663 10.927580 7.189867 4.146541 9.927900 4.110914 6.931810 9.805796 10.940956 10.839517 7.308624 9.034540 10.990499 8.266746 12.830217 9.844948 10.407373 10.333469 10.685699 9.568707 10.018407 10.339735 8.473737 -1.210897 10.016327 8.036915 10.832015 9.543040 10.247394 5.373951 11.554545 9.605972 7.177005 13.557015 10.379575 10.782280 12.437907 10.580965 6.461414 1.604546 9.970140 10.039878 9.545544 TCGA-OL-A5RV 43 0 NA 1062 breast stage iiic t2 n3 mx female 2011 NA yes infiltrating ductal carcinoma 20 black or african american NA NA NA 2 5 2 2 3 3 4 3 2 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3.121176e-07 6.935946e-08 36.3636363636364 9.09090909090909 0 36.3636363636364 18.1818181818182 10.2996121 9.1869180 11.9213512 9.3293887 8.1734298 8.9347889 11.4590459 10.1214258 10.8450374 13.2488241 11.7265986 10.4861555 1.3237736 13.8198690 2.6457017 9.4147588 7.6576650 8.5413181 9.1018412 12.7438121 4.6695371 12.9964105 7.0425820 9.6282676 10.5140004 6.7103450 -0.2611889 8.5525830 9.5429328 2.8262739 9.5921113 7.4496084 -1.2611889 4.0242044 10.2711576 10.4819531 10.0522516 11.7777207 10.3039038 11.5728776 8.6456923 11.6652830 15.1153680 9.2832252 10.5509750 11.2326572 11.0542343 5.9286261 6.5905511 8.6591546 12.0767023 NA 10.6068526 5.1138422 5.1481939 3.2623580 9.9985450 11.9398535 10.4134353 13.9108775 12.8753123 8.2604021 10.6434363 10.3994216 11.0047097 11.2448613 5.3387132 11.8287487 12.0695786 0.3237736 10.5053306 8.4461607 4.6969508 4.9676205 10.8437280 10.0864230 10.4658712 9.1018412 3.6456901 10.4836355 13.8273415 13.1839459 10.5433361 9.9634064 0.7561300 0.7629300 -0.0103700 -0.0132640 -0.0117540 0.0083088 -0.0102320 -0.0306290 -0.0111710 -0.0111710 -0.0285530 0.0196430 0.0196430 0.0041632 0.0041632 0.0041632 0.1556200 0.1556200 -0.0135400 -0.0066432 0.1754300 -0.0522370 -0.0522370 -0.0041546 -0.0070020 -0.0070020 0.0659420 0.0216030 -0.0129890 -0.0129890 0.0000000 -0.0103700 -0.0099565 -0.0117540 0.0016642 0.0202030 -0.0102320 -0.0306290 -0.0306290 0.1631000 0.1712100 -0.0036011 -0.0089906 -0.0089906 -0.0089906 -0.0089906 0.0196430 0.0196430 0.0041632 0.0041632 0.0041632 0.1111100 0.1556200 0.1556200 0.1556200 -0.0135400 -0.0093946 -0.0093946 0.1754300 -0.3569200 -0.0522370 -0.0522370 -0.0023553 -0.0478990 0.0659420 0.0216030 0.0052749 -0.1933700 -0.1933700 0.000 0.000 0.000 0.000 0.156 0.156 0.000 0.000 0.175 0.409 -0.357 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.753 0.000 0.000 0.000 -0.193 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.166 0.166 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.156 0.156 0.000 0.000 0.175 0.409 -0.357 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.753 0.000 0.000 0.000 -0.193 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.166 0.166 0.000 0.000 0.000 0.000 0.000 0.000 8.5069859 0.7388111 5.6813171 11.4980657 11.4034712 8.2011403 11.9846515 9.2697347 9.0024817 3.5967801 12.4214672 11.0227293 3.7388003 1.9087361 5.2306565 7.7074682 3.1982270 8.7653252 11.3024747 11.0262255 8.7736008 5.8048899 8.0830974 10.5481679 6.3237646 4.3826603 3.2623580 NA 10.9846514 6.1566535 6.6871685 7.7831960 7.7967937 11.4090640 10.2456051 4.8680842 9.0299724 3.6929962 8.2406387 12.5556853 10.0875298 6.9137272 0.3237736 1.9087361 8.3571873 -1.2611889 4.3237664 1.7388111 3.6929962 7.1920718 2.6457017 10.2604021 2.8262739 9.2808663 10.6404228 9.6747034 5.2779587 9.8401208 11.2443651 7.3717967 2.6457017 4.0242044 11.4303271 1.0607392 -0.2611889 2.1982427 1.3237736 12.640802 5.096355 8.558980 13.819869 10.288885 10.697717 12.743812 12.302713 9.147131 10.729260 13.659155 11.653000 8.659155 7.839464 NA 6.953121 11.523028 11.359709 12.422235 7.407687 13.606800 9.138614 5.466722 9.272131 7.916221 10.746018 6.500353 8.965214 11.726599 6.526704 3.645690 10.896780 8.347981 6.948937 11.816786 10.282800 10.592501 8.283766 9.039154 11.672861 5.596783 12.887005 10.052252 10.036864 10.117097 11.386485 10.142879 9.995600 10.621445 9.041441 2.198243 9.976328 7.190013 12.076702 7.173430 10.606853 5.621445 11.129479 9.998545 7.513589 13.708460 9.774288 10.122506 12.996484 11.416521 4.986729 2.060739 10.268720 9.945816 9.847326 TCGA-OL-A5RW 40 0 NA 1106 breast stage iia t1c n1 mx female 2010 NA yes infiltrating ductal carcinoma 1 black or african american NA NA NA 4 4 1 1 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 3.918809e-06 9.710324e-07 4.86111111111111 43.75 4.86111111111111 29.1666666666667 17.3611111111111 8.889149825 8.426466886 10.801734707 5.949021261 9.191382026 8.415897647 9.951218845 9.848857164 12.235175187 10.450486285 11.206792406 9.455655386 0.006477564 12.183459034 2.328434383 11.611059988 6.568749625 7.215960042 9.563012801 2.176418524 NA 8.687745190 9.338543416 10.330591675 10.867981458 7.056354838 2.176418524 10.284956279 11.915087060 3.254427755 9.501362311 7.156254015 NA 3.761391663 8.821890031 9.549538648 8.240126347 9.201263584 7.510332185 5.774692194 -0.993378820 6.398824053 13.483506061 5.613098426 9.178934195 8.405250406 8.742908624 4.398822343 2.176418524 8.973732949 10.670064888 NA 10.021921896 7.407385895 5.176430492 5.115033243 7.526143167 11.992882163 10.496354788 11.174865527 11.591469285 8.375013358 11.763271551 9.577311179 10.432771544 10.115031292 1.591487938 12.016160461 10.090650749 5.028874101 9.926115091 8.413774730 5.415897225 3.530070742 8.220825699 8.486287196 10.736976950 8.120248766 1.813853004 9.999445076 13.419936378 10.739098248 9.021921896 10.035794065 1.206900 0.670670 -0.568030 2.487500 -0.748980 0.266080 1.046000 0.202440 -0.464720 0.017544 2.436700 1.172900 -0.713640 0.209620 0.340960 -0.679940 0.301720 0.199990 -0.611240 0.268910 2.495600 -0.709080 0.011121 -0.148110 1.147000 1.285900 0.020343 -0.123950 0.338200 0.273000 0.036512 -0.629410 0.262630 -0.769370 -0.105260 -0.023977 0.543300 0.202440 0.143700 0.545240 -1.292900 -0.644380 1.185700 1.252400 -0.594110 -0.481970 -0.713640 -0.729410 0.078883 0.340960 -0.675180 -0.649030 0.268600 -0.662720 0.366900 -0.649310 0.179080 0.532740 0.152780 -0.722230 -0.709080 -0.112210 -1.006600 -0.763900 0.044857 -0.750370 0.377590 -0.681040 -0.769030 -0.702 -0.702 -0.675 -0.675 -0.457 -0.663 -0.611 0.262 0.000 -0.689 -0.689 -0.709 -0.112 0.000 0.000 0.120 0.120 0.310 0.310 -0.103 -0.103 0.455 -0.650 0.154 0.154 1.360 1.360 -0.749 -0.749 -0.112 -0.112 0.178 0.000 0.445 0.445 0.000 0.000 1.201 0.730 -0.184 -0.184 -0.702 -0.702 -0.675 -0.675 -0.457 -0.663 -0.611 0.262 0.000 -0.689 -0.689 -0.709 -0.112 0.000 0.000 0.120 0.120 0.310 0.310 -0.103 -0.103 0.455 -0.650 0.154 0.154 1.360 1.360 -0.749 -0.749 -0.112 -0.112 0.178 0.000 0.445 0.445 0.000 0.000 1.201 0.730 -0.184 -0.184 9.299978395 NA 7.377194042 11.020876003 12.370504607 7.565271954 12.212758059 2.905678223 9.499231216 NA 13.898432849 12.763384123 5.156255026 NA 1.591487938 7.919396101 4.432772379 10.468497687 11.426203680 10.394524110 10.161324901 3.093965750 8.498359784 10.538375587 5.482241656 4.621213788 3.706950426 1.813853004 10.160058850 4.591469986 5.693007373 9.020527203 8.370641641 11.209796635 10.020527203 0.591487938 11.183926310 4.006504493 5.650362478 12.025923763 8.549538648 10.101903863 1.006477564 3.465935296 7.761394323 5.050902149 5.346357710 -0.993378820 3.591464002 2.328434383 8.761394323 11.000152856 12.012306741 9.731873089 11.144458520 9.381546196 5.156255026 8.407386320 13.492587582 8.312568522 4.050902149 4.706944902 10.925370030 3.176434481 1.591487938 0.006477564 6.754699138 12.273245 9.980204 6.919396 12.183459 9.912646 11.635408 2.176419 10.389671 8.382828 10.008619 13.730648 13.306502 8.973733 8.153712 5.449449 8.101904 8.970848 9.773863670 12.890486460 3.465935296 14.521250722 8.203723373 9.314845817 9.429622659 3.093965750 8.373375462 6.050899973 6.537887749 11.206792406 12.464015925 4.889152259 10.203723495 9.826685759 8.436687393 9.430673121 9.359653597 10.048165876 8.985217203 11.069901839 2.913396884 4.561093918 11.706328644 8.240126347 11.507597544 10.241324196 10.996965319 10.420663452 10.524668153 9.869144078 5.650362478 0.006477564 9.266073448 6.876871745 10.670064888 4.983787124 10.021921896 5.851996339 10.974093318 7.526143167 8.067202543 13.640864084 11.512070259 10.715590633 11.769304047 10.724183240 2.176418524 -1.427789407 9.554365332 9.183926372 8.547603289 TCGA-OL-A5RX 51 0 NA 878 breast stage ia t1c n0 mx female 2011 NA no infiltrating ductal carcinoma NA black or african american NA NA NA 3 5 2 2 3 4 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 6 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 6 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.589149e-07 2.080784e-07 30.7692307692308 15.3846153846154 0 23.0769230769231 30.7692307692308 10.332216 8.729534 11.615918 8.683776 8.740751 9.020448 10.647734 9.246779 11.708087 12.674210 11.088699 10.268254 5.716810 13.612678 2.535481 9.771154 6.903052 8.416377 10.216468 12.326528 3.857414 13.791648 6.350177 10.034712 10.171588 5.496309 NA 9.454344 8.835343 2.428571 9.711832 7.421613 1.050049 3.251689 9.716811 9.911762 10.088973 10.620669 9.755341 10.855798 9.953334 11.468118 15.221043 8.562012 10.398340 10.446231 10.890832 5.670639 3.586104 8.185507 11.549502 -1.271949 10.475480 4.750494 5.456047 4.994915 9.826816 12.111695 10.950015 13.055749 12.871988 8.243826 10.717875 10.646721 11.129806 10.795897 4.728127 11.372658 12.051603 4.120443 10.462412 8.806277 4.013525 4.483016 10.921343 10.088973 10.397897 8.556263 3.937580 10.039307 13.522339 13.050054 10.137517 9.946084 0.96247000 0.96821000 -0.01422800 -0.01829400 -0.00027724 0.01419000 0.00000000 -0.01009400 -0.01638500 -0.01638500 -0.01638500 -0.01078400 -0.01078400 0.00291330 0.00291330 0.00291330 0.00666530 0.00041593 0.00763920 0.01894300 0.00847430 0.00083195 0.00083195 0.00083195 -0.00940460 -0.00940460 -0.00940460 0.02719200 0.00597000 -0.00486490 -0.01395300 -0.01829400 -0.00027724 -0.00387790 0.01419000 0.01419000 0.00000000 -0.01009400 -0.01009400 0.43378000 0.43142000 -0.01638500 -0.01078400 -0.01078400 -0.01078400 -0.01078400 -0.01078400 -0.01078400 0.00291330 0.00291330 0.00416320 0.00416320 0.00041593 0.00041593 0.00041593 -0.00269090 0.01782400 0.01782400 0.00847430 -0.49568000 0.00083195 0.00083195 0.01239100 -0.00940460 -0.00940460 0.02336000 0.00597000 -0.00733390 0.02174400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.007 -0.478 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.956 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.007 -0.478 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.956 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.431 0.431 0.000 0.000 0.000 0.000 0.000 0.000 8.3409948 NA 5.3863385 11.4294326 11.6660517 7.8777970 11.5433093 9.4064183 9.1646400 4.6823205 11.6985916 10.6602597 4.2199816 0.7281382 4.1543888 8.1772750 3.8155857 9.6735700 11.2675274 10.8857889 9.1575329 5.7393540 7.9736790 10.5876610 7.4560463 6.5736169 1.0500489 NA 11.1383125 5.7615486 7.2595079 7.5386980 8.0812730 11.2117933 10.3907945 5.0856796 8.9925688 0.3131297 8.6996696 13.4646338 9.4233544 8.0612815 -1.2719489 1.8980535 9.0158385 -1.2719489 3.9760520 0.3131297 5.4146260 5.8793970 3.4830160 10.2604821 2.1875461 8.8457692 10.6361434 9.6910222 4.8155908 9.2219817 11.2137040 7.9925685 3.1875619 4.4005516 11.1012632 0.7281382 -1.2719489 4.0135248 2.7281164 12.611201 4.561014 8.758793 13.612678 10.306801 10.878825 12.326528 12.246779 9.269223 10.314497 13.508358 11.950770 8.185507 8.143868 -1.271949 7.018145 10.915478 11.4089252 12.3537209 7.4250933 13.7777152 8.8727844 6.1710687 9.2309581 7.2903682 10.3747659 6.8574088 7.7337509 11.0886989 6.2827159 7.8574094 11.2986935 10.1391075 5.7024248 11.8092767 10.5143958 10.4771576 8.4679067 8.8142623 10.9760537 5.8261595 11.9260861 10.0889733 10.1279381 10.0949948 11.1058790 9.5386978 10.2764664 10.3561160 8.3465115 -0.2719489 9.8604009 7.9760537 11.5495015 7.6939106 10.4754800 5.6823233 11.6185805 9.8268162 7.2279721 14.5037362 10.2304607 10.5282171 13.2164057 11.2946560 5.9375798 2.5920623 9.8791427 9.8905175 9.7168109 TCGA-OL-A5RY 52 0 NA 752 breast stage iia t1c n1 mx female 2011 NA yes infiltrating ductal carcinoma 1 black or african american NA NA NA 3 3 4 3 2 6 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 2.774378e-07 6.935946e-08 10 20 10 30 30 9.49426139 8.75899400 10.78172731 7.92249283 9.15566930 9.63130131 9.53843922 10.48197426 11.36250687 13.24820444 10.43918594 10.34903934 0.02772026 17.02049715 2.61263558 10.34621774 3.55123299 8.61075763 7.28034022 10.68454666 -0.97227974 10.25288241 7.64238461 9.56618403 9.29563212 6.31307712 0.02772026 11.25916919 10.39836234 1.61263558 8.45393976 8.61451477 -0.97227974 6.06109789 9.46126047 10.22673381 8.91184555 9.53745003 9.41029891 9.78005562 10.79420383 7.75559532 14.92738590 6.24645559 9.39399723 9.73417105 9.82046524 4.72811643 5.43706457 8.29446131 11.84984742 -0.97227974 11.06899185 6.63500557 7.29446177 5.23712772 10.03890226 11.51576616 10.62339868 11.66656333 12.37141587 8.06659405 10.79544561 10.17504524 10.56683380 10.03400107 3.61263558 11.52527732 8.90725814 NA 10.86333065 9.07206908 2.34383417 7.51952775 10.65566470 9.81802352 9.80410794 8.63500521 3.11513315 7.51952775 13.01253840 12.94541997 9.03470214 9.67423359 0.0707500 0.0707500 -0.1314300 0.0043021 0.0056412 -0.0440090 0.0182430 0.0182430 -0.1304400 -0.0020784 -0.0020784 0.0112610 0.0112610 0.0493980 0.0493980 0.0493980 -0.0442800 -0.0442800 -0.0010978 0.0019418 -0.0503700 -0.1480800 3.6569000 0.0037465 -0.1292700 -0.1292700 -0.1292700 0.0051359 -0.0092666 -0.0098411 0.0171240 -0.1314300 0.0060266 0.0056412 -0.0440090 -0.0440090 0.0182430 0.0182430 0.0182430 -0.0070576 -0.1703100 -0.1665000 -0.0834650 -0.0834650 -0.0834650 -0.0834650 0.0112610 0.0112610 0.0125960 0.0493980 -0.1049700 -0.1049700 -0.0442800 -0.0442800 -0.0442800 0.0079175 0.0000000 -0.0041484 -0.0503700 0.0139110 -0.1480800 0.0037465 -0.0357210 0.0029133 -0.1292700 0.0051359 0.0129340 0.0088920 0.0088920 0.000 0.000 0.000 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.170 -0.128 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.105 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.129 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.114 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.170 -0.170 -0.128 0.000 0.000 0.000 0.000 0.000 8.4221375 5.8220902 5.7141768 11.3422582 11.5716734 6.9886040 10.6266580 9.1039162 9.3003397 5.2371277 13.6770996 11.5731873 3.4871004 1.3495917 2.0276849 7.5745693 4.0276760 11.4878748 11.2862410 10.0500428 8.8188378 4.0276760 8.3496032 10.7530412 9.1270227 10.9221138 7.7991644 NA 11.3529804 3.7281164 7.3405578 8.1900661 8.3585919 10.2104852 9.0248543 5.8731660 8.7159253 0.6126828 7.8123095 12.9210713 8.3382876 10.0092422 NA 3.1151331 7.9905709 2.6126356 5.1774235 NA 8.3697496 3.2756031 5.5195293 11.4010839 5.6858869 9.0092422 10.7376204 10.0085286 7.7589940 11.0493490 12.3953627 10.1900663 4.0720715 6.0829580 10.0297868 0.6126828 -0.9722797 0.6126828 3.1975981 11.4837881 6.6126371 8.8414562 17.0204971 10.1388106 10.7492015 10.6845467 8.8903123 9.3061244 10.3445222 13.2325517 11.2471460 8.2944613 8.2100693 0.6126828 7.8478541 10.3263104 11.067965 12.282999 4.809034 13.563677 9.076148 8.396181 8.521531 7.612638 9.634709 9.168505 8.451841 10.439186 6.027676 2.835035 10.101816 7.931557 8.048655 11.620132 10.849449 10.909171 7.555152 9.517523 8.109824 8.072069 10.581194 8.911846 10.603687 9.804930 10.784648 10.239563 9.405970 9.655209 7.623865 4.755598 9.625038 8.019849 11.849847 9.998500 11.068992 7.141417 11.003165 10.038902 6.535470 14.400506 10.395090 10.566834 11.969823 11.446055 9.860565 5.093763 9.908024 9.417844 9.014939 TCGA-OL-A5RZ 57 0 NA 679 breast stage ia t1b n0 mx female 2012 NA no infiltrating ductal carcinoma NA black or african american NA NA NA 1 4 5 1 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2.392901e-06 9.710324e-07 29.5918367346939 20.4081632653061 4.08163265306122 24.4897959183673 21.4285714285714 9.11098226 8.96799655 11.01118434 7.13086396 8.34571438 8.96060930 10.60173755 10.87518176 10.00867932 14.28962978 8.62902105 11.24198011 0.03280615 17.72785573 2.03284140 7.96060959 6.10964681 8.72282938 3.20276249 12.72435683 -0.43109233 12.35349094 3.78771454 9.43001403 11.54359554 5.93972260 0.03280615 8.10964681 11.32227396 NA 9.01867339 4.52468431 NA 2.49226340 9.45804728 13.43324391 8.15953585 9.28903997 9.18638343 11.16147022 14.78672712 11.13086345 13.65494042 6.93309457 10.61026026 9.06487719 9.34117053 6.36374755 4.98702975 7.86255430 9.09892059 -0.96719385 10.66537225 3.49226340 3.93972495 4.20275465 9.24471965 12.30939202 10.20338239 9.58165328 12.23081592 5.20275465 10.87203518 10.01154190 10.48713067 10.30254251 3.73326756 11.26104881 12.00023780 0.61776865 9.99065895 8.05242187 4.00000000 2.84018121 10.52167571 8.44645930 9.14787497 9.00581119 0.03280615 6.29021980 11.91509233 9.86888180 9.97387900 9.91318024 0.0288110 0.0288110 0.0202510 0.0028225 0.0275460 -0.0431480 3.6569000 -0.4506800 -0.9564200 -0.9325000 1.1096000 -0.0027228 0.0035168 0.0286710 3.3581000 -0.4394700 -0.0846150 0.0132620 -0.8972300 -0.4337300 -0.0344480 2.2361000 3.6569000 1.4391000 0.0090794 0.0090794 0.0090794 3.6569000 0.9645900 -0.4352500 -0.1248100 -0.9255200 0.0222120 0.0275460 -0.4671300 -0.4671300 2.2632000 -0.4506800 0.4787900 0.5263200 0.3379800 -0.9383300 -0.5404400 -0.5002400 -0.2835400 -0.2835400 0.0035168 0.0035168 0.0286710 0.0478850 -0.9065100 -0.9473400 0.5093900 2.4495000 -0.4671300 -0.9019600 -0.4463500 -0.4463500 -0.0344480 0.5074700 -1.2929000 -0.8641800 0.0324710 0.0090794 0.0090794 0.0209510 -0.9007400 -0.8938600 -0.9010400 0.000 0.000 -0.439 -0.439 0.461 0.000 -0.897 -0.446 0.000 0.486 0.486 -1.293 3.657 0.000 0.000 0.000 0.000 -0.849 -0.849 0.000 0.000 -0.543 -0.894 0.000 -0.125 0.000 0.000 0.000 0.000 0.000 -0.414 0.000 0.000 0.526 0.338 -0.938 -0.938 -0.500 -0.500 -0.121 -0.121 0.000 0.000 -0.439 -0.439 0.461 0.000 -0.897 -0.446 0.000 0.486 0.486 -1.293 3.657 0.000 0.000 0.000 0.000 -0.849 -0.849 0.000 0.000 -0.543 -0.894 0.000 -0.125 0.000 0.000 0.000 0.000 0.000 -0.414 0.000 0.000 0.526 0.338 -0.938 -0.938 -0.500 -0.500 -0.121 -0.121 8.87045935 8.44857310 8.33661233 12.01172058 14.30345523 7.09044380 11.30137341 6.13894959 8.74191523 NA 11.56883573 10.70671461 3.61779215 NA 4.49226340 7.28075871 8.89856481 6.96356891 11.48120584 10.35193900 9.15953585 1.84020136 7.77092351 10.44328278 5.85301007 6.55639263 1.03280615 NA 9.60931580 6.86572090 6.40787106 7.20275661 8.94272444 11.19924874 9.57972587 2.61779215 10.24350272 -0.96719385 7.47162320 12.55822984 9.78270080 8.13086345 -0.96719385 0.61776865 8.48198021 2.03284140 3.73326756 0.03280615 2.03284140 7.75755002 0.61776865 11.04405868 2.61779215 9.43584337 11.44698809 9.28549678 4.28075593 10.19585200 9.95838582 7.44645971 2.93971554 2.84018121 10.19207208 0.03280615 NA 2.20276249 1.61781565 11.744339 7.998616 9.015825 17.727856 8.872035 10.691935 12.724357 8.959127 8.778304 10.224507 12.634834 7.212741 7.862554 9.024353 2.354762 8.600787 12.132672 11.64431733 13.71883942 7.85301007 11.95819667 7.43797257 8.96356862 10.30837396 7.52868617 11.70886119 6.27123703 7.81090833 8.62902105 7.26165022 1.35473424 10.22820361 9.66491779 8.79350154 11.03071651 10.41220971 10.50552219 7.03845594 10.97351205 6.42514875 5.50856493 12.17876353 8.15953585 10.01154190 10.50755136 11.54408991 9.04405854 9.92005208 9.96873302 7.11498016 7.74363816 8.61869530 7.51152022 9.09892059 4.45909714 10.66537225 4.20275465 11.92252546 9.24471965 7.20275661 13.87542727 11.44830910 9.25320977 11.18511621 13.21087372 2.03284140 0.03280615 10.12558847 8.57004998 8.79438272 TCGA-OL-A5S0 66 0 NA 620 breast stage iib t2 n1a mx female 2012 NA yes infiltrating ductal carcinoma 2 black or african american NA NA NA 4 4 5 3 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6.935946e-07 2.080784e-07 30.7692307692308 15.3846153846154 0 23.0769230769231 30.7692307692308 8.01131393 8.30981056 10.11913969 5.85268306 9.21946429 7.49957247 8.67084352 9.67978778 12.70278644 11.84176509 10.46117993 9.73403739 -0.98022693 12.69265913 0.60473557 12.17840156 6.43764389 7.74089114 9.93790975 0.60473557 NA 9.94088895 8.92517877 10.29418753 9.62804667 6.55117299 1.01977307 12.16413146 12.06895975 0.01977307 8.20466699 6.01979086 NA 3.01979086 7.74771232 9.67353257 8.76294339 7.65278691 7.37293904 9.56379039 NA 4.63450034 14.85682840 5.63567895 10.40241586 9.12700898 10.13938149 4.18971388 -0.98022693 7.94163278 8.93716399 1.01977307 10.33776973 5.49552569 5.73403756 5.46273619 7.57821266 11.74664863 10.19221932 11.27334390 11.99097613 8.93716399 10.25460928 9.92221227 9.68334995 9.73317840 1.60473557 11.70497866 8.67442781 6.26771931 10.91271408 9.33267482 2.72135078 3.72023468 9.87466020 9.06281924 9.72023160 8.88397815 4.10725265 5.58964665 13.24552650 12.88194488 9.53746129 9.27835792 0.6412100 0.5411700 -0.3570400 0.0055529 -0.3866000 0.3592400 0.6224200 0.2280800 -0.7515000 -0.3351400 0.9583600 1.2775000 0.2367400 0.0508190 -0.3791500 -0.3762800 0.0220240 -0.3819000 -0.3300600 -0.3578300 0.0241270 -0.3771800 1.0508000 -0.3672500 -0.3921900 3.3236000 -0.3787600 0.0479780 -0.3531600 0.0685220 -0.3679300 -0.3570400 -0.4213900 -0.7660000 -0.6038100 -0.7526200 0.6224200 0.2280800 -0.5610700 0.4456200 0.0688080 -0.7515000 0.0081959 0.0134620 -0.3516800 -0.3516800 0.2367400 0.0443320 -0.3453800 -0.3791500 -0.3820000 -0.4143400 0.0220240 -0.3819000 -0.3819000 -0.3382500 -0.3661200 -0.3661200 -0.7534000 -0.3561300 -0.3771800 -0.3672500 -0.3655600 -0.3921900 -0.3787600 -0.3609000 0.1280000 0.0158580 0.0262200 0.395 0.192 0.000 -0.376 0.000 -0.382 -0.330 -0.366 0.000 0.000 -0.340 -0.367 -0.367 -0.759 -0.366 -0.323 0.000 0.641 0.641 -0.351 0.000 0.128 0.000 0.000 0.000 0.124 0.481 -0.376 -0.376 0.115 -0.244 0.622 0.000 0.000 0.000 -0.751 -0.335 0.000 -0.352 -0.473 0.000 0.395 0.192 0.000 -0.376 0.000 -0.382 -0.330 -0.366 0.000 0.000 -0.340 -0.367 -0.367 -0.759 -0.366 -0.323 0.000 0.641 0.641 -0.351 0.000 0.128 0.000 0.000 0.000 0.124 0.481 -0.376 -0.376 0.115 -0.244 0.622 0.000 0.000 0.000 -0.751 -0.335 0.000 -0.352 -0.473 0.000 9.35182839 1.34170116 6.45441939 12.06008157 10.77718190 7.16801417 10.18658264 6.78419903 10.24579452 4.26772305 13.08604927 12.06833664 2.82714832 NA 1.34170116 8.21208486 4.66364634 10.85820795 10.70716757 9.90396241 9.97034781 0.01977307 9.11254898 10.74089106 6.90853553 5.61970352 1.60473557 1.34170116 10.09927666 4.06418444 6.21946478 7.95937083 8.18218327 11.08953364 9.37293861 3.26771556 9.81095475 4.30519718 6.58964815 12.64458732 7.86528168 8.85426282 NA 2.60475929 8.43130286 5.08587925 4.66364634 -0.98022693 6.10725474 4.18971388 4.01979086 11.29591624 5.72023194 9.79128126 11.32784643 10.27127427 6.06418659 9.47717277 12.42586397 10.02471458 4.34172251 4.18971388 9.64641344 1.60473557 8.15678289 NA 9.00847652 9.5246109 9.9070125 7.8367756 12.6926591 9.9009059 11.3479057 0.6047356 9.2486105 8.8255357 9.7519592 12.8924667 11.9947441 7.9416328 8.7219645 3.6047593 8.0027852 9.3155608 10.5345059 11.7014695 3.1072527 12.3565704 9.0338123 6.7340376 8.1046003 8.0669158 9.3214481 6.6851272 6.4792241 10.4611799 11.5693359 -0.9802269 9.0212001 8.1464964 8.5749946 10.3501486 10.2133173 10.0063450 7.1512368 9.7262878 3.7202347 6.0750748 10.3258535 8.7629434 10.1283163 10.0966075 10.0296205 11.4442206 10.4056543 9.4853582 6.2096171 NA 8.8804909 7.3417198 8.9371640 5.6345003 10.3377697 5.5433536 10.5584658 7.5782127 7.4585838 14.5707791 10.5506858 10.4110354 12.2644530 11.3445350 5.4121108 2.1897297 9.5015912 8.8027900 8.3618666 TCGA-OL-A66H 74 0 NA 812 breast stage ib t1c n1mi mx female 2012 NA yes mucinous carcinoma NA black or african american not hispanic or latino NA NA 3 1 NA NA 1 1 3 8 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4.855162e-07 2.080784e-07 5 15 10 30 40 9.5797327 9.0049550 10.9872818 7.8493038 8.4830023 9.5268867 10.9633758 10.0763476 10.5938155 13.0555103 9.0634738 10.3193689 1.7381625 12.6643717 2.3231395 10.5009656 6.9329257 7.9180773 10.2592780 12.6863530 1.3231395 13.5910392 2.1976138 9.7833000 9.6015803 5.9378411 NA 10.6042340 11.3876491 1.5455236 7.4420718 6.9080935 NA 3.1975981 9.3537979 10.3008878 9.8486516 9.2239976 9.2908374 10.9124699 0.7382058 10.1560209 14.6563794 7.1015146 11.0868965 10.6600093 9.8156516 3.5455236 2.8256228 7.9353849 9.7839280 -0.2618807 10.6446832 5.1811105 6.6865355 4.7605350 10.5162455 11.6488111 10.5824818 11.3144165 12.2395080 8.2380144 10.4867805 10.4123783 10.5539519 9.9771701 3.1975981 11.2111130 11.0780183 1.5455236 10.0973688 8.8597019 3.3068018 6.4386072 10.9609633 9.6689057 10.9283017 8.9657843 2.6450560 8.5836582 11.7455461 11.7079146 9.5742187 9.4584126 0.00166420 -0.00171230 -0.00110870 -0.00110870 -0.00304750 -0.00401620 -0.00304750 -0.00304750 -0.00740850 -0.00740850 -0.00691950 -0.00152430 -0.00152430 -0.00069303 -0.00069303 -0.00069303 0.00041593 0.00041593 -0.00871460 0.00305220 0.00555290 0.00694350 0.00694350 0.00694350 0.00332990 0.00332990 0.00332990 0.00124810 0.00166420 0.00166420 0.00031331 -0.00110870 -0.00650500 -0.00981850 -0.00401620 -0.00401620 -0.00304750 -0.00304750 -0.00304750 0.62460000 0.63774000 -0.00871460 0.00097064 -0.58019000 -0.00083160 0.00583090 -0.00152430 -0.00152430 -0.00526100 -0.00069303 -0.00069303 -0.00069303 0.00041593 0.00041593 0.00041593 -0.00747200 0.00305220 0.00305220 0.00555290 0.00000000 0.00694350 0.00694350 0.00750000 0.00332990 0.00332990 0.00124810 0.00249690 -0.00403240 0.00736090 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.63 0.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.63 0.63 0.00 0.00 0.00 0.00 0.00 0.00 8.8348834 NA 5.1644323 10.6397895 11.5475346 9.1256472 11.8424395 8.2769200 9.8635431 4.0957219 12.4907581 11.5269234 4.2617339 4.8256330 2.8256228 7.2219844 4.8256330 12.0056866 10.8872803 10.0350846 9.2724712 0.3230818 7.7880168 11.1072203 6.6570311 5.4246702 -1.2618807 NA 10.1748799 4.3528786 8.5789463 8.1001120 5.0780163 10.6516076 9.4988883 4.8879151 9.3184269 -1.2618807 6.9329257 12.5324827 9.2927571 8.8466929 -1.2618807 -0.2618807 8.0757904 6.4997199 5.2617301 NA 5.2617301 6.1406682 2.4386122 10.7346418 -1.2618807 6.9378411 10.3784133 9.8486516 5.7934511 9.5599424 13.6770587 9.7695250 2.9081020 4.0600993 10.8780394 0.3230818 NA 2.0600820 2.1976138 11.8962794 5.8361994 8.8764402 12.6643717 10.5075930 10.4901308 12.6863530 12.1163277 8.9316937 9.7416862 12.7432665 12.4856271 7.9353849 7.2850628 0.7382058 7.3080241 9.6503092 10.7542802 13.1042173 6.2617301 13.2345172 8.6806830 5.6923658 8.3080241 8.1539102 9.9351699 7.8123095 10.2802329 9.0634738 7.3565541 2.8256228 11.8094631 2.8256228 7.7353475 8.6023544 10.1342379 10.8645502 8.7296901 9.8355422 8.4506954 5.3380821 11.0491218 9.8486516 11.2481907 9.9949667 11.4524139 9.4017265 10.1304857 10.0600964 7.8414562 NA 10.2049994 6.6689063 9.7839280 6.7605363 10.6446832 4.3231322 11.0209672 10.5162455 6.5063528 13.8710295 11.0746749 10.3528782 12.5864979 9.9937871 0.3230818 -0.2618807 9.9943771 9.4123607 8.9168331 TCGA-OL-A66I 36 0 NA 714 breast stage iia t1c n1mi mx female 2008 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 4 3 5 5 2 7 5 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 7.629541e-07 3.467973e-07 30.3030303030303 21.2121212121212 12.1212121212121 18.1818181818182 18.1818181818182 9.2899684 8.4991096 10.8953047 7.6875891 9.1422337 9.4213384 8.6249179 10.6260613 11.4907656 12.3434273 10.8170387 10.2465207 -0.2608432 11.9405798 1.5465611 9.5705288 7.0199921 8.7307435 9.3232444 5.3391338 NA 9.2899684 8.0521045 9.4291234 9.8832425 8.0246239 3.2627789 12.1402291 11.1204941 1.7392000 10.5144203 6.8838798 1.0611541 5.1986513 9.2995545 9.5736926 8.6034079 9.2578748 9.0315432 9.0118514 1.0611541 6.1315380 14.9464647 7.6962366 9.5425456 9.8113541 9.6721744 4.0246211 NA 8.2390677 10.2504801 NA 10.5717161 7.0199921 8.1821649 5.4806884 10.0690179 12.0005820 10.3293407 10.6111268 12.4345586 6.7560305 11.0467070 11.1858293 10.7017561 10.5870619 3.0611541 11.0807404 10.1597081 5.1486128 10.4607480 9.8293339 2.8452291 6.8838798 9.7781406 9.5705288 10.5905802 9.7532420 3.9871480 4.6218643 12.2122931 12.8638276 9.3758462 9.3731251 1.1591000 0.2540200 -0.0454990 0.0043021 0.2024400 0.0926660 0.3551200 -0.0295840 0.2372100 0.7199900 3.6569000 0.3841900 -0.2540600 0.1848000 -0.0585960 -0.0585960 -0.0024938 -0.0670980 -0.2658800 -0.2643200 -0.3445800 -0.2518900 -0.2276100 -0.2276100 -0.0729420 1.0902000 -0.0479360 0.4754700 0.3582200 -0.0027545 -0.1093300 -0.0519910 -0.2782200 0.4251900 -0.2753500 -0.2753500 0.3551200 -0.0295840 0.1783000 0.1102300 -0.5807800 0.1275600 -0.0509110 0.3906500 0.2105400 0.2386100 -0.2620900 -0.2771500 -0.4072700 -0.0585960 -0.0814720 -0.0814720 -0.0385780 -0.0198630 -0.0354480 -0.2664900 -0.2461800 -0.2643200 -0.3445800 -0.0201380 -0.2518900 -0.2276100 0.5953400 -0.0729420 0.4131200 0.3069700 -0.0217840 -0.0206870 -0.0441440 -0.262 -0.262 0.185 0.185 0.000 0.000 -0.266 -0.264 -0.345 0.000 0.000 -0.228 -0.228 0.159 0.415 0.000 0.413 0.000 0.000 0.307 0.307 0.000 0.000 0.193 0.193 0.000 0.000 -0.076 0.202 -0.275 -0.275 0.355 0.000 0.110 0.110 0.271 0.486 0.206 0.206 -0.479 0.382 -0.262 -0.262 0.185 0.185 0.000 0.000 -0.266 -0.264 -0.345 0.000 0.000 -0.228 -0.228 0.159 0.415 0.000 0.413 0.000 0.000 0.307 0.307 0.000 0.000 0.193 0.193 0.000 0.000 -0.076 0.202 -0.275 -0.275 0.355 0.000 0.110 0.110 0.271 0.486 0.206 0.206 -0.479 0.382 7.953541 8.013017 4.411650 10.701395 11.211405 6.400500 10.744846 8.882885 9.525164 2.061154 12.604472 12.143082 2.198651 NA 1.909159 8.747650 4.761588 12.054513 10.844803 11.043573 9.940120 5.353930 10.047561 10.043002 7.968040 4.761588 1.061154 NA 10.047561 2.739222 6.868504 8.098971 5.899093 10.143895 10.832309 5.043003 10.179052 -1.260843 8.148612 12.063683 8.846439 7.411647 NA 3.909149 7.581572 4.353930 4.929048 NA 8.761589 3.262779 9.045283 10.868183 4.520579 7.873648 11.289728 9.980013 6.553003 10.510298 13.820830 10.282253 7.074611 6.390274 10.506992 1.739200 5.096772 3.783614 7.702117 12.113034 10.163388 8.352090 11.940580 9.755333 10.573693 5.339134 8.921616 8.616521 9.761589 13.977290 12.568350 8.239068 7.575272 2.439650 7.418702 10.788049 11.155491 11.345858 4.131540 12.934049 8.754637 8.661063 9.582357 8.626442 10.638503 9.339134 6.262783 10.817039 12.031543 1.739200 9.907267 6.460322 8.608322 12.714980 12.723551 9.861402 7.650374 8.706448 6.929047 7.456898 10.616763 8.603408 10.652859 10.025202 10.959298 11.535667 10.556605 11.083795 7.439661 NA 10.253462 7.769889 10.250480 7.527124 10.571716 5.919130 11.719897 10.069018 7.487415 14.048449 11.209880 11.112631 12.158260 11.279592 4.847746 1.739200 9.661806 8.786345 8.854265 TCGA-OL-A66J 80 0 NA 1996 breast stage i t1c n0 mx female 2008 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 1 4 3 6 4 4 3 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.31783e-06 3.121176e-07 25 25 4.16666666666667 31.25 14.5833333333333 9.7388335 8.9494380 10.7119526 7.3775671 8.2951054 9.0200154 9.8158746 9.6662741 11.0631946 9.3911869 11.7519000 10.0497627 1.1720394 13.8095490 2.8500993 10.7088484 5.9161804 8.7418741 5.9998377 12.6332932 2.6574342 14.1730747 2.7569806 9.7856900 9.9107863 5.4794472 -1.1497606 8.6798129 9.5365909 3.6574457 8.2930338 7.5400885 -1.1497606 2.3095255 9.7266073 9.8330839 10.1133596 10.9864407 10.0873003 10.3054176 2.7569806 11.3154016 14.7172001 6.5181952 10.4693932 10.3702179 10.3519275 4.7080713 -1.1497606 8.1765198 10.3100342 -1.1497606 10.4601924 6.1988183 5.3578862 4.6829777 9.9242317 12.1279589 9.8394849 11.7626055 12.6247745 8.7524653 10.6900814 10.6833757 10.7793487 9.6493719 5.5239289 11.1227201 11.4648002 0.4350952 10.5613271 8.6066465 2.3432372 3.4350551 10.6582501 9.9415257 10.2631894 9.4104232 3.4350551 6.4350535 12.3916710 12.3676367 9.3519275 9.8703758 0.00206490 -0.01835300 -0.00926660 -0.00926660 -0.00235530 -0.30098000 0.00000000 0.00000000 3.65690000 0.58811000 0.00541390 0.00116340 0.00555290 0.00791750 2.00330000 -0.58716000 0.02567100 -0.00106340 0.00152550 0.01447000 0.00875280 0.00638710 0.00638710 0.00638710 -0.00152430 -0.00152430 -0.00152430 0.01628600 -0.60510000 0.00206490 -0.00097017 -0.00926660 -0.00235530 -0.00235530 -0.30098000 -0.30098000 0.00000000 0.00000000 -0.00340740 0.00138680 0.01377200 -0.60757000 0.00610900 0.00610900 0.00610900 0.00610900 0.00555290 0.00555290 0.00791750 -0.60690000 -0.59360000 -0.59360000 -0.00106340 -0.00106340 -0.00106340 0.00152550 0.01447000 0.01447000 0.00875280 -0.59439000 0.00638710 0.00638710 0.00889200 -0.00152430 -0.00152430 0.01628600 -0.00221680 0.02693500 0.02693500 0.000 0.000 -0.594 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 -0.301 0.000 0.000 0.000 0.000 -0.608 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.301 -0.301 0.000 0.000 0.000 0.000 -0.608 0.000 0.000 0.000 0.000 0.000 8.7449082 NA 6.5505298 11.4785359 10.7922382 8.2171774 10.8869508 8.7790824 9.3618429 2.1720074 12.8281751 11.6133670 3.5505313 6.5365907 3.3095255 7.9612263 1.4350418 10.1215533 10.4670986 10.0187624 9.8564163 2.5505313 8.0716774 10.4345831 6.1810071 10.0997963 -0.1499207 NA 10.6400315 5.8158751 5.8724570 8.6526066 6.2847177 11.5480939 9.7065159 3.9375516 8.9494380 NA 8.2054414 12.6703690 9.4657201 9.2294687 -1.1497606 6.2594815 8.5982833 NA 5.0200132 -0.1499207 4.8500893 5.3578862 1.1720394 9.9421868 -1.1497606 8.4537168 10.7169828 9.6322695 5.8158751 9.5703347 10.9976133 9.0324847 2.3095255 3.3095255 13.1677149 1.4350418 NA NA 2.6574342 14.6247956 5.2251284 8.7002771 13.8095490 10.3853657 10.2207777 12.6332932 12.4263385 8.1854806 9.7327334 13.0109072 11.9018091 8.1765198 7.6606620 0.4350952 7.9481225 11.2199603 11.420658 12.772489 4.916180 13.301352 9.623229 5.479447 9.233795 7.427519 10.649898 5.999838 6.435053 11.751900 7.393122 2.020022 10.717755 5.926906 6.916125 9.762231 10.184364 10.319223 9.561757 9.882825 9.217505 4.780830 11.832107 10.113360 10.495298 8.976795 11.358380 10.142412 10.255764 9.713502 7.557449 NA 8.929362 6.821634 10.310034 4.098015 10.460192 6.948122 11.415430 9.924232 6.107479 13.986759 9.807918 10.020641 12.440326 11.047614 2.020022 4.703588 10.063195 8.926906 9.840903 TCGA-OL-A66K 72 1 1275 NA breast stage iia t2 n0 mx female 2010 NA no infiltrating lobular carcinoma NA white not hispanic or latino NA NA 2 2 5 3 4 4 6 3 2 2 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5.895554e-07 2.774378e-07 32 12 0 36 20 10.2886986 9.2211746 10.9225389 7.8992463 9.1576817 9.2131373 10.3704701 9.8161213 11.1469104 8.9363358 10.9572383 9.9581403 3.4842155 13.6492091 3.0512503 9.9363358 6.7516900 8.3199087 9.2781435 12.1077519 1.5366995 14.0615330 3.1216454 10.1693031 10.0989189 3.8586077 NA 11.4296551 8.0239423 0.3142905 8.9314455 7.2877419 NA 3.4297632 9.7675547 10.2410742 10.4319272 11.0978280 10.0071902 11.0225058 4.8790686 11.9733880 14.7184277 6.8851521 9.9363298 10.8521496 10.8177786 5.6600587 1.0512329 7.9484899 10.3727269 0.3142905 10.3986495 3.4842155 5.2211733 3.9387751 9.1545374 11.7340687 10.6384646 11.9812477 12.6962776 9.0658281 10.9369460 10.7357984 11.3639058 9.7482172 3.9387751 11.3648130 11.3352640 NA 10.2030274 8.5318380 4.2582023 3.5873050 10.7893419 9.5398932 10.6180648 9.2829508 3.0512503 8.7832474 12.6716528 12.7482172 10.0841219 9.6878743 1.12730000 1.10110000 -0.29650000 -0.29650000 -0.28917000 0.01880300 0.00680440 0.02245100 0.02146300 0.02146300 0.02146300 0.00000000 0.00000000 -0.29945000 -0.29945000 -0.29945000 -0.31187000 -0.28727000 -0.31172000 -0.62389000 -0.31517000 0.23674000 0.23674000 0.23674000 -0.03626500 -0.03626500 -0.03626500 0.00041593 -0.30815000 -0.29296000 0.00208050 -0.29650000 -0.28917000 -0.32401000 0.01880300 0.01880300 0.00680440 0.02245100 0.02482900 0.32012000 0.31905000 0.02146300 0.01321300 0.01321300 0.01321300 0.01321300 0.00000000 0.00000000 -0.29792000 -0.29945000 -0.29945000 -0.29945000 -0.29783000 -0.28727000 -0.32321000 -0.94832000 -0.62389000 -0.62389000 -0.31517000 -0.63642000 0.23674000 0.23674000 0.02960600 -0.03626500 -0.03626500 0.00041593 0.01516800 -0.32403000 -0.32403000 0.000 0.000 -0.299 -0.299 -0.287 -0.287 -0.286 -0.624 -0.315 0.195 -0.636 0.237 0.237 0.000 0.000 0.000 0.000 0.832 1.125 0.000 0.000 0.000 -0.324 0.000 0.000 -0.297 -0.297 -0.289 -0.289 0.000 0.000 0.000 0.000 0.320 0.320 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.299 -0.299 -0.287 -0.287 -0.286 -0.624 -0.315 0.195 -0.636 0.237 0.237 0.000 0.000 0.000 0.000 0.832 1.125 0.000 0.000 0.000 -0.324 0.000 0.000 -0.297 -0.297 -0.289 -0.289 0.000 0.000 0.000 0.000 0.320 0.320 0.000 0.000 0.000 0.000 0.000 0.000 8.266540 -1.270556 5.868872 10.903623 11.420629 8.176591 11.489418 7.023345 9.577131 1.899253 11.413632 10.940395 7.325511 2.977243 3.536675 8.274286 3.314290 9.813466 10.586136 11.192846 9.489210 3.773712 8.302969 10.383510 7.033102 3.816784 -1.270556 NA 10.487545 7.310522 6.695106 7.474155 6.060238 10.599640 10.298228 5.510680 9.025091 NA 8.180533 12.136589 11.047299 8.117339 -1.270556 1.536699 9.645947 3.252885 3.899243 NA 4.587305 6.344031 2.051233 9.668901 1.899253 7.686423 10.184649 9.623381 5.562212 8.866313 11.080813 8.161864 3.773712 2.816784 11.370696 5.729322 -1.270556 3.373175 2.536675 11.619453 4.252885 8.827354 13.649209 9.875056 11.004573 12.107752 12.037803 8.836539 10.071396 13.210995 12.270055 7.948490 10.170710 -1.270556 7.440128 11.412535 11.0655492 11.4489243 7.1173387 13.4125300 9.2420620 4.5366746 8.3623169 8.3513735 10.1185012 6.1130253 8.4158220 10.9572383 7.9961079 1.3142905 10.2499402 8.0846729 6.4361285 9.5147740 10.3577671 10.0456031 8.8286693 8.8727047 10.1059897 4.8790686 12.5473045 10.4319272 9.8463153 9.6747653 11.1807903 9.5398932 10.0387979 10.1221756 8.0285294 NA 9.0852892 7.2684802 10.3727269 5.6600587 10.3986495 10.0319604 11.0835544 9.1545374 6.9289944 13.6944745 9.9296071 10.0585573 12.8012866 10.7554992 0.3142905 1.7293135 10.0007845 9.2597280 9.9289940 TCGA-OL-A66L 71 0 NA 1301 breast stage ia t1c n0 mx female 2010 NA yes infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 3 2 NA NA 4 4 3 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.98771196 7.83855537 10.48504296 4.28321803 8.93689319 8.19010862 10.02567099 8.89289218 11.14755500 11.08080028 10.94386603 9.56771751 1.92565769 12.97091357 2.09558691 11.21798750 6.47256088 7.60514612 8.76644377 11.54840406 -1.07430434 13.02048579 6.88566831 10.69932015 9.23854876 7.24307875 -0.07430434 10.90972818 8.37893639 -1.07430434 9.03810526 5.46482507 NA 2.24759338 8.54588576 8.55684284 9.50968872 9.40544614 7.99980725 9.39123220 2.51063285 10.45850874 13.93010578 4.98159696 10.30612687 9.36549680 9.06009225 4.65358746 4.68055503 7.16883957 10.55091807 NA 9.79680100 6.05494830 4.31798415 4.51062652 8.67218028 11.66418037 10.77897541 12.58966861 11.73904621 9.10681809 9.88494341 9.93829035 9.53392071 9.13755424 1.51060753 10.73060353 10.23457365 -1.07430434 10.18482056 7.97551440 4.78364523 3.87986257 10.28156751 9.18893495 10.06585648 7.97005986 3.09558691 9.48695385 12.98281144 13.14104715 9.35088174 9.64334232 0.56899000 0.60521000 0.00416320 -0.00110870 0.00539310 0.00194180 0.00485790 -0.60222000 0.00208050 0.00208050 0.00263570 0.00286800 0.00286800 -0.00241110 -0.00241110 0.00094497 -0.00110870 -0.00110870 0.00694350 0.00305220 0.00069327 -0.00373950 -0.00373950 -0.00373950 -0.00664320 -0.00664320 -0.00664320 -0.00443120 -0.00249380 -0.00249380 -0.00235530 0.00416320 0.00555290 0.00775090 0.00194180 0.00194180 0.00485790 -0.59380000 -0.62345000 0.00944910 0.00083195 0.00208050 -0.00166290 -0.00166290 -0.00166290 -0.00166290 0.00286800 0.01894300 -0.00241110 -0.00241110 0.00235810 -0.00368030 -0.00110870 0.00166420 -0.00573710 0.00221930 0.00291330 -0.00069303 0.00069327 -0.63486000 -0.00166290 -0.00373950 0.00597000 -0.01188700 -0.00664320 -0.00443120 0.00499690 -0.61748000 -0.61748000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.014 -0.603 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.014 -0.603 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.617 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.594 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.09809342 6.57671712 7.10557542 11.63000182 11.39632472 10.20023030 11.47737412 4.18531156 10.23275272 7.33505711 12.89163045 11.77890131 4.78364523 3.92566718 1.24762376 7.26551566 3.73301803 11.49789234 10.74624373 9.77272316 9.69136631 5.68055222 7.67385884 10.31583474 7.33929419 9.62263336 -1.07430434 NA 10.21798750 5.80830782 6.59809122 8.03419040 7.68388871 11.45433235 9.39225216 2.73302888 9.80371671 NA 6.42551134 12.64216380 9.31260619 9.68804779 0.92569566 1.51060753 8.04719918 5.55502160 7.22944661 2.51063285 5.86818053 6.82653323 3.83255588 11.13877006 0.51065816 7.73623753 10.13268017 9.69962919 6.10557542 9.69715524 11.49954965 9.85566383 2.38509966 4.78364523 10.65656046 1.73300718 -0.07430434 1.24762376 3.09558691 12.69430197 4.99175311 8.00248144 12.97091357 10.18246425 10.88820039 11.54840406 10.86009390 8.83924348 9.67385866 13.78631638 11.45753463 7.16883957 9.45996864 -0.07430434 7.10059191 9.18423194 10.3403511 11.8263440 4.7836452 13.1129375 8.8798623 6.3435180 8.3665351 6.4725609 9.2243126 7.3602940 8.3830467 10.9438660 7.6467653 0.5106582 9.5847698 7.8295477 6.0895681 7.7233271 10.0754130 9.6646025 6.2743940 11.1974206 4.0131317 5.7070250 12.8338708 9.5096887 10.6416279 9.9000804 8.2610564 9.4792950 9.5237184 10.1111607 5.9590885 -1.0743043 10.0509565 7.0118020 10.5509181 6.6399108 9.7968010 4.8325559 10.7147919 8.6721803 7.6569847 14.4056671 10.7906258 9.8689133 12.3193244 10.7910125 3.7836452 1.7330072 9.1652643 8.9129297 8.6086603 TCGA-OL-A66N 59 0 NA 792 breast stage iiic t3 n3 mx female 2011 NA yes infiltrating lobular carcinoma 13 white not hispanic or latino NA NA 5 2 5 3 4 4 3 9 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.7195298 8.4944632 10.4678175 5.0720243 9.2540743 8.3550850 9.1562624 9.2908266 11.9631558 8.9886233 11.3008445 9.8397074 4.5496076 13.6044927 0.7682479 10.6129509 6.3829542 8.0628659 7.8741533 11.7515950 -0.2317521 13.1594886 6.7107596 10.6693420 10.4547456 2.7682479 -1.2317521 12.7457387 7.8126394 -0.2317521 8.9617703 5.1776348 NA 5.0720243 8.8030439 9.4210901 9.3727983 10.2142945 9.1508691 10.2991390 9.8228493 8.5884242 14.6252541 5.1749177 10.2844376 9.8845891 9.4626029 5.0350300 7.7483847 7.1776358 10.9614624 NA 10.4850645 5.8016683 5.0536457 4.4406732 8.4192966 11.7766737 11.0329808 10.6912011 11.9183096 10.0185435 10.1685909 10.0179511 9.9886233 9.2680909 1.7682479 10.4712834 12.0337136 1.3532104 10.0155792 8.1497878 3.5490777 5.0161709 10.4538699 8.3437844 10.0408749 8.3054635 4.2918098 9.2194561 12.9140180 13.3953229 9.3447293 9.9217971 0.95825000 0.96015000 -0.25253000 -0.25253000 0.00218000 0.25382000 -0.00142510 -0.00142510 0.48448000 0.48448000 0.49782000 0.01080300 0.00565250 -0.00433210 -0.00433210 -0.00433210 0.02184400 0.00000000 -0.51927000 -0.25386000 0.01233700 0.00301280 0.00301280 0.00301280 -0.00861570 -0.00861570 -0.00861570 0.25663000 -0.24828000 -0.24828000 -0.00142510 -0.25253000 0.00218000 0.00037662 0.25132000 0.24431000 -0.00142510 -0.00142510 -0.00142510 0.48970000 0.48970000 0.51799000 -0.25301000 -0.25301000 -0.25301000 -0.25301000 0.00565250 0.00565250 -0.00433210 -0.00433210 -0.52023000 0.00718230 0.00000000 0.00000000 0.00000000 -0.51779000 -0.25386000 -0.25386000 0.01233700 -0.52658000 0.00301280 0.00301280 -0.24342000 -0.00861570 -0.00861570 0.25663000 -0.24828000 0.01303400 0.01303400 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 -0.254 0.000 0.199 -0.527 0.000 0.000 -0.243 -0.243 0.000 0.000 -0.248 0.710 0.257 0.257 -0.248 0.000 0.000 0.000 -0.253 -0.253 0.000 0.000 0.254 0.254 0.000 0.000 0.490 0.490 0.484 0.484 -0.253 -0.253 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 -0.254 0.000 0.199 -0.527 0.000 0.000 -0.243 -0.243 0.000 0.000 -0.248 0.710 0.257 0.257 -0.248 0.000 0.000 0.000 -0.253 -0.253 0.000 0.000 0.254 0.254 0.000 0.000 0.490 0.490 0.484 0.484 -0.253 -0.253 0.000 0.000 8.5380830 NA 5.9776989 11.4069072 11.7622448 8.8511259 11.3543811 7.0915697 9.5437400 5.3681572 12.0724537 11.7879001 3.7224442 -1.2317521 2.0901759 7.5130785 3.8126420 10.3732615 10.7408659 9.9230631 9.1465399 3.6751385 7.5496045 10.4970159 8.0420407 5.8450609 -0.2317521 NA 10.5900190 6.7850535 6.2600991 7.6781381 9.5561475 10.6758381 9.7906129 2.3532104 9.3218744 -1.2317521 7.1562621 13.5629655 8.8002907 9.2710769 NA 2.2276795 8.6930576 5.1080937 5.3074030 -1.2317521 5.3829542 6.0811287 4.9776966 10.7092926 8.7296948 7.9970637 10.5618484 9.7512386 6.7166123 9.3352503 10.3088574 9.1334739 2.6751385 5.4406699 10.1960816 0.3532104 NA NA 3.1605653 12.164270 5.549604 8.940672 13.604493 9.704883 11.286898 11.751595 8.318992 9.018342 9.421986 13.122012 10.733669 7.177636 9.704147 -1.231752 7.295722 9.666090 10.1610991 11.8930126 6.1691253 15.0320077 8.4157033 6.2276775 8.7850532 6.8871865 8.9137314 7.6478282 7.4617324 11.3008445 7.7597670 2.2276795 8.8858882 11.3667629 5.8924687 9.6945411 9.5231326 10.0788578 6.8715332 10.0285766 4.6989796 6.1080958 11.7195297 9.3727983 10.1459978 9.9988660 10.5113965 9.9135403 9.0901730 9.6706201 5.9874141 0.3532104 9.1909511 7.0674526 10.9614624 8.0373718 10.4850645 6.6011349 10.3020614 8.4192966 6.0901738 14.5966295 10.1014004 9.5916123 11.8570333 11.1457267 5.4264560 3.1605653 8.8988157 8.5380830 8.6432263 TCGA-OL-A66O 39 0 NA 528 breast stage iib t2 n1a mx female 2012 NA yes infiltrating ductal carcinoma 3 black or african american not hispanic or latino NA NA 1 1 2 2 1 1 3 8 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.5906466 7.9432198 11.0069572 5.1079347 8.8768150 8.1980747 10.3526611 9.8378591 11.0143185 13.6681262 12.7418090 10.7282119 2.1230371 12.6243807 1.5380911 10.1093572 7.8464175 7.9995581 9.1674352 12.1612742 1.5807244 14.3308181 3.4449718 10.2594470 10.3933364 9.1962901 2.2385117 10.9413570 10.1007981 1.8600093 7.9022135 5.3062622 NA 2.9975092 8.8611334 8.8130391 9.2463002 8.9163733 7.7883771 9.6034947 1.8600093 11.0633547 13.9311673 7.0962313 11.2304740 9.7291379 9.3851359 5.8234819 6.3259818 7.0138117 10.3149228 NA 10.2570395 4.0299299 3.2385117 3.2385117 8.4614062 12.1042516 10.5987745 11.5625257 12.0010920 9.2428468 10.0950636 10.0945847 10.2908774 9.4038118 1.8600093 10.9142040 11.8395748 -0.4619585 9.7572471 7.7054969 5.2105058 1.5380911 10.5110584 9.2007471 10.0178589 8.3062632 0.1230040 8.8577506 12.7104280 9.8851463 9.6628462 9.9805038 0.4015700 0.4015700 0.0184080 0.0142030 0.0267670 0.0236790 0.0072057 -0.8876000 0.0143030 0.0143030 0.0143030 -0.0043198 -0.0043198 0.0088649 3.6569000 -0.9330600 0.0024699 1.1015000 -0.3898700 0.0070555 -0.4077300 -0.1061500 -0.1061500 -0.1061500 -0.0915140 -0.0915140 -0.0825610 -0.1542800 -0.0569890 0.0201750 -0.0293380 0.0176090 0.0267670 0.0369080 0.0236790 0.0236790 0.0072057 -0.8876000 -0.8990300 -0.0032268 0.0109550 0.0143030 0.0073338 -0.0126740 -0.0126740 -0.0126740 -0.0043198 -0.0237820 0.0088649 -0.9450500 -0.9175600 -0.9175600 0.0024699 0.3951100 0.3951100 -0.3898700 0.0070555 0.0070555 -0.0145300 -0.0313860 -0.1061500 -0.1061500 0.0076121 -0.0915140 -0.0825610 -0.1542800 -0.0076370 -0.0622530 -0.0622530 0.000 0.000 -0.882 -0.882 0.395 0.395 -0.390 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.381 -0.154 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.899 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.882 -0.882 0.395 0.395 -0.390 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.381 -0.154 -0.154 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.899 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.9325414 NA 4.7668972 11.9239410 11.8273771 10.5493863 11.5776831 NA 9.8490152 2.7860108 12.1404295 11.3274064 6.6308364 3.1230371 0.1230040 7.1379912 4.4688179 9.3397870 9.8355681 10.1235106 10.2175588 5.1527878 8.6814619 10.6004621 6.1379912 1.8600093 0.8599695 NA 8.6966883 5.7668972 5.7475324 8.2676992 6.2996293 11.2696946 9.0279264 -1.4619585 10.7773788 NA 5.1079347 13.1874471 9.4275825 7.8001732 NA 1.7080106 8.5687458 NA 4.3960567 0.5380415 2.7860108 4.9643432 1.5380911 11.3424114 1.7080106 5.2245806 10.9128464 9.9506485 3.1819294 8.2845928 11.9819287 6.4207216 2.5380663 3.9303967 11.0594337 3.3454390 NA -0.4619585 2.1230371 14.799610 7.174703 8.578368 12.624381 10.167435 10.743566 12.161274 11.000581 8.544166 9.706124 12.623053 10.612555 7.013812 9.742650 5.814202 7.037925 10.111726 10.5278279 12.2453299 6.1003217 12.7222527 8.8430002 5.9892889 9.1435582 8.7692997 9.7006398 5.0772387 10.1065098 12.7418090 8.8257910 0.8599695 8.7475321 4.2385194 8.6855888 7.4022651 8.9022132 10.1683457 8.8894927 10.8249251 6.2385175 4.4922762 12.8544620 9.2463002 11.2029703 7.7764830 8.2912955 8.8812642 9.4145956 9.9495896 5.4805915 NA 8.2355677 7.8395748 10.3149228 5.9303967 10.2570395 5.3582591 10.6773102 8.4614062 7.3227132 14.5110584 11.1850873 8.8768150 11.8088119 11.2193170 0.8599695 1.1230702 9.4944548 8.2591778 8.4922750 TCGA-OL-A66P 75 0 NA 428 breast stage iia t2 n0 mx female 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 1 3 5 1 2 6 2 9 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.7609291 8.0366676 10.1533606 5.9843478 9.2339990 9.5761241 9.4526930 9.6923332 11.4960994 12.6751384 10.5936934 10.0036847 1.1098954 14.0406150 6.3828955 11.0947708 5.5910031 8.5583381 6.5801983 11.1898068 0.5248661 9.6373547 3.1098787 10.6309938 10.1732728 6.5249146 1.1098954 13.8359006 11.0252591 0.5248661 9.0087309 6.4556527 NA 8.3921938 8.8625369 9.0756618 9.2697490 9.0890646 9.6784672 8.9986209 2.6948356 7.2322741 14.0509252 5.5386002 9.3128176 9.5610888 9.2731079 4.4318035 5.5249162 7.7147394 11.6170115 -0.4751339 10.0445514 6.1973406 7.4257815 5.5249162 8.8977801 11.2926858 10.4659627 10.8269828 12.0398757 8.1651603 9.9647460 9.2897868 9.6529095 9.0795040 2.1098620 11.5514385 7.1023442 -0.4751339 10.3354867 8.2218829 1.8468343 5.3062732 10.1220366 8.8241231 10.1359400 8.2764590 3.1098787 6.3704049 12.7430242 12.8208275 8.4674295 9.4541734 -0.00318590 -0.00304750 -0.00719580 0.49147000 -0.00482950 -0.02785900 -0.01354700 -0.01129400 -0.05199100 -0.05199100 0.26263000 -0.00152430 -0.07294200 0.00471900 -0.00360110 -0.14734000 0.01530800 0.01530800 -0.00885260 -0.00069303 0.00187050 -0.07320900 -0.07320900 0.51194000 0.05651300 0.05651300 0.05651300 0.50516000 0.00850370 -0.00318590 -0.01450300 0.04533200 0.00513590 -0.00277070 -0.02785900 -0.02785900 -0.01354700 -0.01129400 -0.10026000 -0.00954260 -0.26300000 -0.26233000 -0.25636000 -0.50339000 -0.18484000 -0.18484000 -0.10955000 0.06832600 0.00471900 -0.00360110 -0.18345000 -0.18345000 0.01530800 0.00633100 0.05622800 -0.00595220 0.01502800 0.01502800 0.00708260 -0.33595000 -0.07320900 -0.07320900 0.00569190 0.05651300 0.05651300 -0.01312700 -0.00802440 -0.00055444 -0.00055444 0.000 0.000 0.000 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.368 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.333 0.000 -0.262 -0.038 -0.185 -0.185 0.000 0.000 0.000 0.000 0.000 -0.147 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.368 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.333 0.000 -0.262 -0.038 -0.185 -0.185 0.000 0.000 9.2781318 -0.4751339 6.3828955 11.1042310 12.7532829 8.3330748 10.9652653 6.8907130 10.4224808 4.2253521 13.5186496 12.3726498 5.1396250 0.5248661 2.1098620 6.7823024 8.1795514 12.2190553 11.0990356 8.8868589 8.8692110 3.3322640 8.1973406 10.9348364 9.5638340 13.6182501 6.3450947 NA 10.7202874 5.1687704 5.8103171 8.9616268 10.3929660 11.0565354 8.2460142 3.7728464 9.9833217 0.5248661 7.1615401 12.8555519 8.6043998 9.4182167 1.1098954 6.7440830 7.9172324 1.1098954 4.5693088 5.7147401 8.3450943 4.4318035 5.0484760 11.6435318 -0.4751339 8.9427675 10.7917017 9.5597142 7.6593416 10.8097392 13.2137118 10.7337591 6.6334399 6.5135997 9.8558320 2.1098620 NA NA 2.6948356 11.520753 7.389101 9.004695 14.040615 10.119240 11.022268 11.189807 8.596378 8.455711 9.584260 13.053858 10.569992 7.714739 8.482017 2.524916 8.090969 9.371972 10.001661 12.075181 3.524916 13.529046 9.225355 7.748917 7.796378 6.547283 9.247842 8.519269 8.367265 10.593693 7.395280 4.654201 9.492141 3.772846 7.522716 8.930057 10.810317 9.953275 7.873643 11.606066 3.612376 9.581553 11.323168 9.269749 10.571357 9.891237 8.971998 9.724588 9.128541 9.707309 5.864766 6.048478 9.630706 7.612378 11.617012 10.684156 10.044551 5.674661 10.723974 8.897780 7.389101 14.326419 10.995574 10.037656 11.252836 10.994048 6.744083 2.694836 8.751327 8.552821 9.066012 TCGA-OL-A6VO 43 0 NA 858 breast stage ia t1c n0 mx female 2012 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 1 2 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.41043068 8.65447492 11.44455185 8.22493792 9.23703090 7.05136558 9.38999716 10.71481063 11.90720345 12.99248328 10.86288814 10.22776863 3.59558720 12.12891099 1.88510575 8.21844651 9.04862310 7.64240194 8.09099206 5.34451962 NA 5.18054573 10.35934689 10.49687055 11.26781012 7.68068513 0.01063664 8.17384900 10.80368007 1.74760223 9.99171032 6.23301180 -1.57432586 4.12609733 8.17384900 9.90240240 9.41859455 8.14161825 9.57794104 10.69097827 1.23302906 13.75233150 15.08212301 8.43094382 9.43758231 11.18637619 10.80340901 3.33255041 NA 9.56903950 9.84139798 0.42567414 9.67713857 4.57540310 5.53417991 4.35639034 8.25696346 11.94676587 11.55284453 9.62348721 12.30188540 7.12956019 10.92076178 10.65140900 11.01273054 10.85506296 3.85191891 12.02382510 9.51709160 -1.57432586 9.86184730 9.96481505 3.50802292 3.63510428 12.32142084 9.83186125 10.55461724 10.03483500 -0.57432586 6.57031416 12.39477291 10.11957873 9.51576862 10.01577547 1.1861000 0.8796600 -0.1533600 0.4001100 0.1946600 0.0048579 2.8878000 -0.1179600 -0.0579240 0.8794600 1.1870000 1.4240000 -0.1899900 0.1240400 -0.0091286 -0.0091286 0.0000000 -0.2815600 0.0080567 -0.1468200 0.1342100 0.2519100 0.2519100 0.2519100 -0.2213300 -0.2213300 -0.2272400 -0.3232100 0.3307600 0.3772600 -0.2142900 -0.1533600 -0.1827000 -0.6454600 -0.3847000 -0.3976200 0.1210800 2.0558000 -0.1806800 0.2596500 0.3873300 0.1506900 1.3945000 1.3945000 0.0000000 0.0158660 -0.1899900 -0.1899900 -0.2604700 -0.0091286 -0.3207700 -0.3207700 0.0522410 -0.2815600 -0.3212400 0.0080567 -0.1300400 0.0013868 -0.1755100 -0.7590000 0.2519100 0.2519100 -0.1883600 -0.2213300 -0.2213300 -0.3531600 -0.0637030 -0.2080900 -0.2080900 0.136 -0.054 0.124 -0.312 0.000 -0.282 0.000 -0.151 0.000 -0.726 -0.726 0.252 0.252 1.118 -0.187 -0.221 -0.221 0.530 0.530 -0.280 -0.280 0.000 -0.208 0.278 -0.184 0.361 0.515 -0.149 0.000 -0.330 0.000 -0.115 -0.115 0.260 0.260 1.139 1.139 0.897 0.000 0.000 0.000 0.136 -0.054 0.124 -0.312 0.000 -0.282 0.000 -0.151 0.000 -0.726 -0.726 0.252 0.252 1.118 -0.187 -0.221 -0.221 0.530 0.530 -0.280 -0.280 0.000 -0.208 0.278 -0.184 0.361 0.515 -0.149 0.000 -0.330 0.000 -0.115 -0.115 0.260 0.260 1.139 1.139 0.897 0.000 0.000 0.000 8.69244289 NA 6.06228148 10.60432110 11.46131450 7.05519457 10.83822609 7.16863903 8.30826894 -1.57432586 11.19011319 10.76037366 4.30830262 NA 4.23301371 10.71163635 2.94921741 10.42459924 11.12001413 11.30600505 10.42354141 0.01063664 8.94332565 10.29948485 5.96481447 3.71105432 -1.57432586 0.42567414 10.53646579 6.66882969 6.51841397 9.66286612 5.32047385 11.43956683 10.90366738 2.23299837 9.96626866 NA 7.61053176 12.07378908 8.77880322 6.44246418 NA 2.23299837 8.84772105 3.37985659 2.12608080 NA 4.85191891 2.59717358 1.74760223 11.12739591 5.15357838 10.14247573 10.92275958 10.08252803 4.20701823 9.41434085 13.37621215 7.39144038 4.33255041 2.67357904 10.24583516 1.01063664 7.76773093 2.23299837 7.15016971 7.779708 7.995512 8.105136 12.128911 10.064997 11.234017 5.344520 11.853755 9.400537 10.522042 13.043411 12.904679 9.569039 9.323502 5.774384 8.421423 10.850085 10.879956 11.954355 7.763278 14.204550 9.098082 4.783210 9.553006 9.777700 10.391282 5.575403 4.534180 10.862888 11.998475 2.425647 10.412565 9.178873 8.839591 11.461830 11.706572 10.599021 8.183879 9.946766 5.683045 5.368171 10.851108 9.418595 10.039446 10.870671 11.438804 11.336112 11.841266 10.636328 8.453562 NA 9.392911 5.480937 9.841398 5.448025 9.677139 10.287519 11.329124 8.256963 8.511952 14.098164 11.150809 10.351211 14.082249 11.686429 3.010619 7.436884 10.456668 9.482294 9.742503 TCGA-OL-A6VQ 49 0 NA 600 breast stage iia t2 n0 mx female 2012 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 3 1 1 2 3 3 4 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.96296886 9.49640103 11.95858150 9.40906417 7.91546832 9.16180658 10.96004539 9.63665344 10.09675060 10.32066327 11.14130608 10.32294056 2.59955584 13.19590917 2.82195506 10.14774374 6.87258254 8.50645477 10.01319201 12.21304664 7.59956402 13.06121405 6.42399324 9.52239616 10.70721710 7.35445128 0.01464095 9.05352057 8.72540818 2.33654048 8.18452677 7.85380545 0.01464095 4.65845715 9.81388314 10.13224471 9.86791113 12.19326643 9.75438214 11.41334529 8.45754505 11.02162887 14.78490413 8.93260011 9.92299419 11.55230535 11.04940056 5.01460078 5.18452628 9.09940988 11.81590576 NA 10.47914738 5.71504221 5.22405571 4.33652620 10.14902788 11.82758104 10.45235369 13.23180200 12.92842597 8.34999195 10.31609776 10.06988405 11.41281084 11.13483943 4.92149346 11.15095195 12.28255868 NA 10.53128651 9.00895490 3.33652620 6.38964080 10.45858112 10.15543138 10.29188899 9.19699597 2.82195506 9.66565320 14.42657591 14.07791239 10.03835593 9.66565320 0.85918000 0.87488000 0.00263570 0.00263570 -0.00027724 0.03087300 0.00069327 -0.34939000 0.00124810 0.00124810 0.00124810 0.01008200 0.01008200 0.00471900 0.00471900 0.00471900 -0.00816240 -0.00921680 0.00221930 0.00346870 0.01237600 0.00485790 0.00485790 0.00485790 -0.01009400 -0.01009400 -0.01009400 0.01502800 -0.00069303 -0.00069303 -0.00373950 0.00263570 0.01530800 -0.00027724 -0.00180140 -0.00180140 0.00069327 -0.34939000 -0.34939000 0.00000000 0.00000000 0.00124810 0.00917050 0.00917050 0.00917050 0.00917050 0.01008200 0.03228100 0.00471900 0.00471900 0.00471900 0.00471900 -0.00816240 -0.00921680 -0.00921680 0.00221930 0.00346870 0.00346870 0.01237600 -0.55497000 0.00485790 0.00485790 -0.51311000 -0.01009400 -0.01009400 0.01502800 -0.17348000 -0.52369000 -0.53398000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.356 -0.555 0.000 0.000 -0.513 -0.513 0.000 0.000 0.000 0.859 0.000 0.000 -0.173 -0.537 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.349 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.356 -0.555 0.000 0.000 -0.513 -0.513 0.000 0.000 0.000 0.859 0.000 0.000 -0.173 -0.537 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.349 -0.349 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.22892064 2.01460524 5.44086585 11.02373038 10.97822023 7.43700297 11.23195350 10.14402622 8.86081292 5.94533848 12.09974203 10.76746727 3.71503672 1.59955584 4.10206178 7.96296886 3.01460524 9.97315433 11.42717145 11.20133484 8.94829217 5.89724527 7.42399240 10.15670870 7.52239635 5.92149108 0.01464095 NA 11.45754510 6.89724406 7.21427346 7.89111839 8.33201416 10.97915185 10.10338984 4.01460524 8.62562630 0.01464095 8.11263342 12.10900923 8.73570088 7.52239635 NA 4.01460524 8.30462055 NA 4.26253088 0.01464095 5.30000288 5.70026214 3.92149346 10.17950856 1.01456954 9.31838238 10.38855421 9.55569826 5.30000288 10.01319201 11.96296882 8.54207848 2.01460524 4.65845715 11.24762204 1.01456954 NA 2.33654048 2.01460524 12.544381 4.715042 8.449230 13.195909 10.260154 10.649413 12.213047 12.545739 8.974604 10.600503 14.623203 12.693642 9.099410 8.610791 NA 7.658458 11.894950 11.434562 12.266676 6.742522 13.808302 9.792679 6.629311 9.086064 7.776153 10.293237 7.214273 7.490335 11.141306 6.506454 3.336526 10.881880 6.629311 5.766280 11.845117 10.619155 10.796781 8.304621 8.818733 12.325214 7.143884 12.583759 9.867911 10.192021 9.653037 11.028622 10.210589 10.322941 10.516439 9.642135 NA 9.541805 8.228921 11.815906 7.058996 10.479147 6.687027 11.174473 10.149028 8.003286 13.771158 9.989016 10.366645 12.997952 11.180765 4.406918 1.014570 10.411206 10.367748 9.567271 TCGA-OL-A6VR 48 0 NA 1220 breast stage ia t1b n0 mx female 2011 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 3 1 NA NA 1 3 3 4 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.7528703 8.7052934 11.7435565 8.5961115 8.7599747 8.8691299 11.0699066 9.4792158 8.8997774 13.0657661 8.1658718 10.1038064 1.4531751 12.7445161 2.1901091 9.6598966 6.5824371 7.9503401 9.4537795 13.3357966 5.1287182 13.8518379 5.7508343 10.1178102 11.5199902 6.4975469 NA 6.6841076 8.5663170 3.2832254 9.3062898 7.3111343 -1.7169079 2.5311444 9.6302963 9.2417813 9.6889019 11.8960971 8.9189467 10.8476162 10.6763508 11.4211803 14.4630793 7.8225230 10.6883620 11.1848497 10.2454015 4.0111467 8.0280624 8.2846367 10.7952282 NA 10.2117469 4.9556522 4.1658718 2.1901091 9.1216446 11.6566375 10.2996886 12.7194195 12.5119721 8.1719719 10.5296722 10.7044413 10.8710061 10.7331509 5.2139654 11.3061164 13.4538187 0.2832106 10.3503267 9.9234735 3.4981360 3.2374261 10.9631485 10.5353026 10.5798580 9.9884289 2.5311444 7.1474146 11.4288423 13.0553369 9.8488066 9.8756856 0.00000000 0.00000000 0.00194180 -0.00083160 -0.00456950 -0.02907400 -0.74238000 -0.74089000 1.54750000 1.56600000 1.77140000 0.00708260 0.00708260 -0.00263220 -0.00263220 -0.00263220 0.00708260 0.00027728 0.04840400 1.66930000 0.00861350 0.02342600 0.02342600 0.02342600 0.02693500 0.02693500 0.02693500 -0.00097017 0.02020300 0.00000000 0.00166420 0.00194180 0.03889100 -0.00456950 -0.02907400 -0.02907400 -0.74238000 -0.74089000 -0.74089000 0.00027728 0.00027728 -0.77770000 -0.00055444 -0.00055444 -0.00055444 0.04599100 0.00708260 0.00708260 -0.00263220 -0.00263220 -0.00207840 -0.00207840 0.00708260 0.00027728 0.04075100 0.00013863 -0.15605000 -0.15605000 0.00861350 -0.75694000 0.02342600 0.02342600 0.00097064 0.02693500 0.02693500 -0.00097017 -0.01285100 0.01614600 0.02519100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 -0.741 0.000 0.000 0.083 0.861 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 1.635 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.741 -0.741 0.000 0.000 0.083 0.861 0.000 0.000 0.000 0.000 8.7063444 NA 5.5500141 11.2712031 11.7106724 8.1508627 10.8965576 7.5378086 9.1724968 1.4531751 10.9646866 11.1142131 2.9270810 3.6407829 2.8681929 7.8905586 2.7426530 10.4899376 11.5329346 10.1069938 9.1263645 0.6051150 8.2020920 10.3197456 5.6755450 4.1161152 -1.7169079 NA 10.5415001 7.5453236 6.2547716 8.1931217 8.0727623 11.9122379 9.4792158 2.8681929 9.1871103 1.6051624 7.7930037 13.0208984 9.3858605 6.8681916 -0.1317874 5.2020925 8.2605084 -1.7169079 3.5311569 -0.1317874 2.2832403 5.5601891 2.8067983 10.5353026 1.0905825 9.0776444 10.7715708 9.4730530 4.1161152 9.1543637 11.7331509 6.5640001 3.6407829 2.7426530 11.4931388 1.6051624 -0.1317874 3.7094892 1.6051624 13.088612 4.327623 8.990588 12.744516 10.539142 10.155903 13.335797 12.024063 9.205047 10.265866 12.475059 11.354020 8.284637 8.460648 2.090582 7.552356 11.020053 10.877553 12.215997 7.577849 13.641086 8.484127 4.512050 8.753887 7.660439 10.249482 5.165872 6.071132 8.165872 6.540616 1.983678 9.496333 9.939206 5.756447 9.542972 9.453780 10.153208 10.979888 9.507833 11.500883 3.412511 11.516778 9.688902 11.417173 10.340882 10.748540 8.417655 9.732893 10.212487 8.922569 NA 10.130470 5.492683 10.795228 5.875687 10.211747 5.675545 10.956979 9.121645 6.614146 14.411565 10.455969 10.168925 12.352510 10.239605 3.141204 NA 10.025538 9.281819 9.313206 TCGA-OL-A97C 67 0 NA 271 breast stage iib t3 n0 m0 female 2013 NA no other, specify 0 black or african american not hispanic or latino NA NA 2 4 NA NA 5 2 2 2 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.8565443 9.7688187 11.9417183 8.7799422 7.9687037 8.4585678 10.0499772 9.9657843 10.4064082 13.5455420 10.6428817 10.4369462 -0.5666132 12.3746594 2.7553576 11.8260141 6.9252815 8.4390529 8.2757786 11.4630607 2.2407723 12.5169077 6.8512806 9.3802615 9.1407876 3.6813593 -0.5666132 8.6501743 9.4149957 4.1883139 10.0969864 8.3373101 1.4334402 4.9880166 9.6919944 9.6183036 9.6777922 11.1124686 9.6207805 11.7031395 1.0184205 10.3145423 14.6887152 8.8971981 9.4846372 11.0632403 11.1545276 5.9725870 0.4333868 9.3759428 11.4924348 0.4333868 10.8748164 4.7188329 5.0481403 4.8257449 9.6501741 11.8607412 10.0853770 12.7222944 12.8651871 8.6860939 10.9696756 10.4821741 11.0969865 10.5983352 5.0183894 11.2098614 12.1399244 -0.5666132 10.5334336 8.3403188 6.9655119 4.7188329 10.4334283 9.9937612 10.5008627 8.6033534 8.4995175 8.9030702 14.9804434 12.1583685 10.2999346 10.0342705 0.7147100 0.6714300 0.0038854 0.0000000 -0.0026322 0.7171600 -0.0094810 -0.0062286 -0.0044312 -0.0044312 -0.0044312 0.0011093 0.0011093 -0.0080244 -0.0080244 -0.0080244 -0.0065050 -0.0065050 -0.0114730 0.7130200 0.0045800 -0.0140900 -0.0140900 -0.0140900 0.6138900 0.6573700 0.6186100 1.4165000 -0.7551300 0.0026357 0.0070826 0.0000000 -0.0026322 -0.0153740 0.7171600 -0.0138370 -0.0094810 -0.0062286 -0.0038779 0.8842600 0.8762700 -0.0044312 0.0058309 -1.2929000 -0.0042929 -0.0049844 0.0011093 0.0011093 -0.0189020 -0.0080244 -0.0080244 -0.0080244 -0.0065050 -0.0065050 -0.0065050 -0.0114730 0.7130200 -0.0080244 -0.7415900 0.0052749 -0.0140900 -0.0140900 0.1032200 0.6138900 0.6426800 0.7087000 -0.0127070 -0.0052610 0.0137720 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.643 0.643 0.715 0.715 0.690 0.690 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.717 0.000 0.000 0.884 0.884 0.000 0.000 0.000 0.000 0.120 0.120 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.103 0.103 0.643 0.643 0.715 0.715 0.690 0.690 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.717 0.717 0.000 0.000 0.884 0.884 0.000 0.000 0.000 0.000 0.120 0.120 7.6860936 5.9412237 7.7095526 11.2069797 11.0384448 7.7082955 10.4737181 9.0670958 8.6838926 1.7553576 12.7529594 11.3579960 4.5208936 -0.5666132 4.7188329 8.6525969 2.6033593 10.4446556 11.3037931 10.6878665 8.6428817 1.4334402 7.5102443 10.3350495 6.7095526 3.6813593 -0.5666132 1.4334402 10.3508004 4.3403201 8.5601329 8.4613346 9.6343270 10.6880850 9.9628589 2.7553576 9.2245912 -0.5666132 8.9860974 13.1680321 9.3099454 11.6176839 NA 5.3641662 8.2914092 2.2407723 7.4107083 -0.5666132 6.3037935 4.7492124 2.4334402 11.8675353 -0.5666132 6.9252815 10.4757717 9.6158227 7.2914092 10.9870577 12.9429560 9.3876247 4.1338676 5.3403201 10.5729797 3.8928573 -0.5666132 0.4333868 4.9569906 12.634442 7.588246 8.126916 12.374659 10.388352 10.273419 11.463061 11.050896 9.077285 10.530144 13.534830 10.227032 9.375943 8.968704 2.603359 6.884639 11.167291 11.9287838 12.3591682 6.9491287 13.6605915 8.2914092 6.0772836 8.4221131 7.6331006 10.3569490 7.3282459 4.7553576 10.6428817 5.4557974 5.1338676 10.5838103 9.7222944 8.4353152 13.7333518 10.7019704 10.1295266 9.2867379 8.9783927 11.2627547 5.4995175 11.9871128 9.6777922 10.3091777 10.1364667 10.3927058 10.3335405 10.2647356 10.2440000 8.9956708 NA 9.6217698 9.9671669 11.4924348 5.3403201 10.8748164 8.8928600 10.6652496 9.6501741 7.0554798 14.3639347 9.7165167 10.2929631 12.8288286 11.9432034 1.0184205 -0.5666132 9.8364403 9.4832769 9.8732592 TCGA-PE-A5DC 72 1 1430 NA breast stage iiia t2 n2a m0 female 2005 NA yes infiltrating lobular carcinoma 5 white not hispanic or latino NA NA 1 2 2 2 1 1 3 3 2 2 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.983722e-06 7.82313e-07 14.4230769230769 23.0769230769231 0.961538461538462 35.5769230769231 25.9615384615385 9.6142959 9.4353556 10.7910521 7.5212918 8.3685396 9.3151002 9.6362503 9.4173555 10.3876175 13.6323544 11.5576966 10.3506293 0.7798060 13.0380228 3.0277556 9.6432368 6.0466111 8.1656874 6.2392567 12.6963575 4.8883487 13.9378033 5.0836048 9.4965930 11.0486592 7.7628185 1.9497590 11.0178563 10.3940745 0.3647965 7.7340213 5.8672886 -0.2201100 4.4236790 9.3676024 9.4776611 8.7826399 9.7727632 8.8619740 10.6432368 5.9989943 9.3315330 14.4180062 7.2570163 9.8187439 11.2227683 10.4615025 4.7571033 7.2474301 7.7798251 10.9209740 -0.2201100 10.0972375 7.7599647 4.1373806 4.0652276 9.7987205 12.0450003 10.1613679 11.8624729 12.5111439 7.6253151 10.0887326 9.7142529 11.1724106 10.3392020 3.5347091 11.1428645 12.4294179 -1.2202780 10.2801689 8.7656667 3.7834252 2.1017509 10.5697660 10.0807493 10.4793973 9.2238043 1.5871729 7.6095474 11.8935670 11.9581785 9.8599762 9.4715683 0.0000000 -0.0370820 0.7068200 -0.0008316 -0.0059522 0.1224100 0.6728900 -0.6849700 0.0048579 0.0048579 1.1589000 0.0022193 0.0153080 -0.0769450 2.8855000 0.8956800 0.0526680 -0.0076101 0.0332670 0.6823500 0.5856000 -0.5863700 0.0573680 0.0573680 -0.0062286 -0.0062286 0.1584600 0.6957700 -0.6620700 0.0000000 -0.5832400 -0.6721400 -0.6741700 0.0020805 0.1224100 -0.0048280 0.6728900 -0.6849700 -0.6849700 0.6980200 0.0297470 -0.6835100 -0.6643000 -1.2929000 0.0353830 0.0175140 0.0153080 0.0181030 -0.3877200 -0.0325870 -0.6758200 -0.6758200 0.0115390 -0.0076101 0.0238470 -0.6639300 0.0132130 -0.6748400 0.0235660 -0.6874700 -0.6762800 0.0573680 -0.6648500 -0.0062286 -0.6465000 0.0094491 0.0072217 -0.6701200 -0.6701200 0.000 0.000 0.000 -0.599 0.000 0.000 -0.664 -0.675 0.000 -0.662 -0.662 -0.676 0.000 0.000 -0.665 0.000 0.000 0.000 0.000 0.000 0.684 0.000 -0.670 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.000 0.000 -0.685 0.000 0.000 -0.678 0.687 -0.664 0.000 -0.155 -0.155 0.000 0.000 0.000 -0.599 0.000 0.000 -0.664 -0.675 0.000 -0.662 -0.662 -0.676 0.000 0.000 -0.665 0.000 0.000 0.000 0.000 0.000 0.684 0.000 -0.670 0.000 0.000 0.000 0.000 0.000 0.000 0.121 0.000 0.000 -0.685 0.000 0.000 -0.678 0.687 -0.664 0.000 -0.155 -0.155 8.5446963 -1.2202780 6.9396967 11.1976774 11.3736828 6.5067241 10.8108368 8.2276520 8.6054354 3.5871849 12.2396407 12.0646822 5.3033862 3.9091106 4.3344110 7.6221748 3.4236857 10.8639689 10.7238048 10.3296096 8.8159984 5.2876200 8.4182608 10.8781860 6.4380366 6.7105626 4.3647895 -0.2201100 9.9764269 6.9696490 4.7571033 8.6000039 8.5077455 11.1666466 9.5246587 2.7798270 10.1140981 -0.2201100 6.2555574 11.9248017 10.9003868 9.4741827 -0.2201100 5.4802651 7.6409115 2.1017509 5.6127152 5.9193758 4.2060884 5.9813618 2.6867246 10.5916009 0.3647965 8.0158393 10.8929159 9.8452410 6.4380366 8.4018766 12.4130472 6.7628179 4.2060884 3.3647825 11.5436597 3.9892753 NA -0.2201100 2.8672837 14.899613 7.322857 8.761392 13.038023 10.538048 10.445161 12.696357 13.008644 9.697197 9.676914 12.441269 10.973350 7.779825 7.893567 2.239245 7.824219 11.453355 11.264144 12.599505 4.452253 13.947673 8.767089 5.612715 10.111861 8.818744 10.438063 5.898767 6.423681 11.557697 6.394535 NA 9.736201 6.580724 7.746042 9.692714 9.312181 9.533042 6.680691 9.529694 9.231036 4.206088 11.259090 8.782640 10.128553 10.169994 9.680692 9.949750 10.413728 10.843557 7.494071 0.779806 8.746777 6.041543 10.920974 3.423686 10.097237 4.710564 11.217837 9.798720 6.705291 14.114447 10.000203 9.643237 11.873242 10.978884 0.779806 1.949759 9.915534 8.385304 9.327683 TCGA-PE-A5DD 64 0 NA 1953 breast stage iia t2 n0 m0 female 2006 NA yes infiltrating lobular carcinoma 0 asian not hispanic or latino NA NA 2 2 2 2 4 4 3 8 2 2 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 1.179111e-06 4.855162e-07 25 47.9166666666667 6.25 12.5 8.33333333333333 8.926535 9.042579 11.412909 8.272140 8.337883 8.978634 10.841947 9.102505 10.285416 9.273300 10.894498 10.245808 0.576377 12.111446 0.576377 9.869421 7.308782 7.957154 10.534885 12.980143 1.798714 14.502814 7.919148 9.746107 10.445155 5.836861 -1.008682 11.358104 10.037812 -1.008682 8.839993 5.968651 NA 6.002597 9.498173 9.580084 8.846238 10.850128 9.971509 10.817521 NA 11.492212 14.806278 9.157947 11.064842 10.346721 9.963631 4.922107 4.035765 8.473169 10.852069 1.313304 10.394382 5.530530 5.691811 4.576335 9.078833 12.057795 10.700884 11.440002 12.426910 9.362057 9.951372 9.396852 10.615708 11.018930 4.078832 10.798725 10.442065 -1.008682 10.516401 8.686598 5.037075 5.400760 10.652257 9.416586 9.622547 8.355504 2.991372 8.385832 13.255739 12.042409 9.869421 10.568326 0.0291840 0.8048000 0.0829090 0.5366100 0.0000000 0.0189900 0.0127950 -0.0202750 -0.1570700 -0.1570700 -0.1570700 -0.0473950 0.0554260 0.0197830 0.0197830 0.0197830 -0.0127850 -0.0127850 -0.7691100 0.0300290 -0.7545200 -0.7341500 -0.7341500 -0.7117600 0.0817550 0.0817550 0.0817550 0.0777180 -0.1794200 -0.7698800 -0.0802750 0.0829090 0.0000000 -0.7842000 0.0189900 0.0189900 0.0127950 -0.0202750 0.0063871 0.0169850 -0.0098185 -0.1570700 0.0209030 0.0209030 0.0209030 0.0209030 0.0554260 0.0994330 0.0197830 0.0197830 -0.7836100 0.0353830 -0.0127850 -0.0127850 0.0442900 -0.7691100 0.0300290 0.0300290 -0.7495000 -0.7540000 -0.7341500 -0.7117600 -0.7648400 -0.7299400 0.0817550 0.0513870 0.0244080 -0.7500900 -0.7339800 0.000 0.000 0.000 0.000 0.000 0.000 -0.769 0.000 -0.755 0.000 -0.754 -0.734 -0.734 -0.765 -0.765 0.000 0.000 0.000 0.770 0.000 0.000 0.000 -0.734 -0.153 -0.153 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 0.000 0.000 -0.174 -0.174 0.000 0.000 0.000 0.000 0.000 0.000 -0.769 0.000 -0.755 0.000 -0.754 -0.734 -0.734 -0.765 -0.765 0.000 0.000 0.000 0.770 0.000 0.000 0.000 -0.734 -0.153 -0.153 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.157 -0.157 0.000 0.000 -0.174 -0.174 8.454893936 4.772730248 6.348921091 12.007133187 10.417634407 8.178919759 11.710972429 9.668913164 10.171247742 NA 12.584644082 11.563688593 4.545956017 1.313303907 3.450802153 7.375074195 4.120650535 10.862504859 11.784363292 10.362057124 9.049361490 6.375074195 8.143654635 9.889971148 7.430161474 6.220188697 1.798714147 NA 10.528102625 7.191042430 6.248756825 7.792269724 6.705615801 12.606963698 10.207509292 2.798734881 9.357691869 NA 7.776004602 11.727348750 9.901262740 9.459993832 NA 6.013736926 7.715883764 1.798714147 6.425997999 0.576377015 6.013736926 6.614300532 3.161291138 10.194717709 -0.008682243 8.340098000 10.846627528 9.708189133 6.366409648 10.746674621 11.697865715 7.479209539 2.898266407 4.276772076 10.644214655 3.450802153 NA NA 1.313303907 12.573105 5.898259 8.227384 12.111446 9.949922 10.410803 12.980143 10.872484 9.316675 10.157533 12.747718 10.094002 8.473169 9.073519 2.161307 6.576332 10.601010 11.418944458 12.983334339 6.705615801 13.710968685 8.146187810 6.691809111 9.253464606 7.366408773 11.078766257 7.557423876 9.504110076 10.894498350 7.925060056 -0.008682243 10.744586473 5.649580972 7.920805395 10.238110318 10.558375078 10.787003533 7.035763554 9.572570255 10.381538625 5.576331661 12.740834826 8.846238177 10.646453137 10.530043618 11.259619288 11.001198320 9.195940806 11.075513712 7.670849540 3.945570250 9.558622370 7.212811519 10.852068694 6.191041443 10.394381769 6.295149946 11.256949605 9.078832624 6.719290242 13.159436130 9.398637463 9.723537060 11.969186221 11.056449204 1.313303907 2.991372184 8.929479161 10.019966503 9.891481769 TCGA-PE-A5DE 41 0 NA 2645 breast stage iia t2 n0 m0 female 2007 NA yes infiltrating lobular carcinoma 0 white NA NA NA 2 3 2 2 4 4 3 4 2 2 0 0 0 0 7 0 5 7 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 7 0 5 7 0 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 5 7 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 8.98205e-06 3.606692e-06 10.3723404255319 78.1914893617021 2.3936170212766 7.71276595744681 1.32978723404255 9.9125928 9.2720570 11.6604207 8.5416407 8.3048469 9.5450755 10.5493578 10.2931487 10.2741284 12.7208972 11.3378987 10.5684722 -0.1708811 11.9583965 3.2214286 9.2490736 5.4438221 7.9532350 8.7117564 12.9657042 -1.1710435 14.0500964 6.8898094 9.9914671 9.8985633 9.2030663 2.2885358 11.3020581 9.8326315 1.1510145 8.0139887 7.0090224 -1.1710435 5.7239326 10.0800040 9.9258287 10.7858527 11.7193778 9.5433590 10.6616080 2.7359987 10.7945371 14.5513340 7.9565144 10.5794018 10.6340512 10.1145158 4.4140746 1.6364506 8.2385046 12.3349251 NA 10.3784169 5.9889846 8.2106562 4.4438254 10.5544798 11.6870945 10.7513262 11.8862591 12.5870243 8.1954357 10.2474932 10.0171583 11.2792937 10.8248806 4.6870943 11.3316967 9.6243415 1.6364506 10.6324375 8.6348575 3.7151795 7.4511649 10.4378304 9.8680325 9.6627942 9.1317525 3.2885505 9.7231734 13.3216552 12.7766591 9.9145860 9.6283952 0.75108000 0.78350000 0.01112100 0.32093000 -0.32100000 0.34827000 0.34713000 -0.33006000 -0.33629000 -0.33629000 -0.33802000 -0.33078000 -0.34518000 0.00000000 0.00000000 0.00000000 -0.00069303 -0.00069303 -0.00733820 0.00569190 -0.10099000 -0.35110000 -0.35110000 -0.35110000 -0.00456950 -0.00456950 -0.00456950 0.33496000 0.00110930 0.00110930 0.00235810 0.01112100 -0.32100000 -0.32985000 0.34827000 0.34827000 0.35675000 -0.33006000 -0.33006000 0.36561000 0.10570000 -0.33629000 0.34524000 0.34524000 0.34524000 0.34524000 -0.34518000 -0.34113000 0.00000000 0.00000000 0.00000000 0.00000000 -0.00069303 -0.00069303 -0.00069303 0.00416320 0.00569190 0.00402430 -0.09061100 -0.33756000 -0.35110000 -0.35110000 -0.30345000 -0.00456950 -0.00456950 0.33901000 0.01922300 0.33270000 -0.36533000 -0.331 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.350 0.013 -0.351 -0.351 -0.304 -0.304 0.000 0.000 0.000 0.750 0.335 0.335 0.000 -0.365 0.000 0.000 0.000 0.310 -0.321 -0.321 0.348 0.348 0.339 0.009 0.106 0.106 -0.336 -0.336 0.345 0.345 0.000 0.000 -0.331 -0.331 0.000 0.000 0.000 0.000 0.000 0.000 -0.101 0.350 0.013 -0.351 -0.351 -0.304 -0.304 0.000 0.000 0.000 0.750 0.335 0.335 0.000 -0.365 0.000 0.000 0.000 0.310 -0.321 -0.321 0.348 0.348 0.339 0.009 0.106 0.106 -0.336 -0.336 0.345 0.345 0.000 0.000 8.7524409 2.7359987 5.6235304 10.6890365 11.2315927 7.0416340 11.7483493 8.9207604 10.1499987 2.4140814 12.1483622 11.5557915 3.4140814 -0.1708811 0.8291189 7.4548224 5.1145170 12.5360412 11.2882889 10.7296030 9.2171308 8.3329393 8.3448134 10.1493499 8.5906649 5.7239326 3.8735081 -0.1708811 10.8904847 3.7360095 8.2149757 7.8898094 6.3209666 11.3741866 10.0201727 5.9165770 9.3058597 NA 7.2427416 12.1957089 8.1976202 8.1932484 -0.1708811 1.6364506 7.9788609 3.7833100 4.1145170 NA 8.4693585 3.3526738 5.3526738 10.4410604 0.4140273 7.6104734 11.0660247 9.5527746 7.5015387 10.8035281 14.0553375 9.5570340 6.3289603 5.6492935 10.0976556 2.5295461 -0.1708811 3.8735081 0.4140273 12.951228 5.487326 8.173409 11.958397 10.487325 10.511669 12.965704 11.908098 8.912593 10.403707 13.374319 10.319964 8.238505 9.184465 1.636451 7.259566 10.887444 11.411726 12.457445 5.711756 13.689374 8.963540 8.973772 8.758372 7.973772 10.905902 9.489109 9.056730 11.337899 7.593985 2.916572 10.320466 6.840341 7.785286 9.774557 11.031544 10.751698 6.794898 9.308894 10.674212 8.033685 11.590989 10.785853 11.057932 10.293659 9.897892 10.470262 10.237974 10.811038 8.481958 NA 9.922194 7.834738 12.334925 9.128322 10.378417 7.687094 11.192974 10.554480 7.247387 13.710562 10.327963 10.694847 12.468906 10.929776 5.674605 1.151015 9.788391 9.755410 9.101743 TCGA-PL-A8LV 54 0 NA -7 breast stage iiib t4 n0 m0 female 2013 NA no medullary carcinoma NA black or african american not hispanic or latino NA NA 4 4 1 2 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.4475311 8.4446940 11.3869930 8.5592972 9.0817180 8.4332892 10.8920267 10.1130299 13.4543647 12.2655095 11.2338125 9.9371360 3.3946102 11.9037813 1.4560176 10.2158974 6.1656668 8.6800110 5.9690791 7.6524062 -1.1291027 8.0207939 8.3406887 9.7604671 11.0823267 5.9371348 -0.1289449 11.4604638 11.0926339 2.3304724 6.5220981 8.9003340 1.4560176 6.6057565 10.0271299 9.5381583 8.4560094 9.2395532 9.0067561 11.3439914 -1.1291027 8.4004773 14.9223195 9.2048394 9.5930004 9.9051579 9.7605508 4.4256339 3.1189743 8.4820714 9.6840262 NA 10.1016677 4.5149050 6.0707199 6.8252425 8.1748273 11.9628127 10.9575148 11.3999892 12.0030644 7.4967555 10.6687083 10.4038459 10.4375766 11.4972121 4.3113360 11.6156704 11.6973967 5.5292587 10.3763621 9.4351962 3.9619011 4.1929753 10.6458339 11.0381513 10.3798319 9.6784017 0.8710551 6.9208959 13.4715405 11.4065652 10.1483342 11.0334381 0.870930 0.870930 0.064253 0.495140 -0.329930 -0.534370 0.884370 -0.114800 0.603080 0.603080 1.638900 0.600370 0.157530 -0.315620 -0.509990 -0.509990 -0.340760 0.042335 1.258500 -0.104050 0.481340 -0.391380 0.038940 0.024856 -0.397060 0.643260 0.643260 -0.380530 0.442770 -0.132490 -0.790580 0.064253 -0.430410 -0.331870 -0.507980 -0.469380 0.058537 -0.114800 -0.139710 -0.361370 1.009500 1.811700 -0.303780 1.165000 1.165000 1.165000 -0.247370 -0.247370 -0.410460 -0.509990 -0.521460 -0.521460 0.520170 0.000000 0.000000 -0.496710 0.297240 -0.374120 0.111430 -0.381770 -0.391380 0.024856 -0.316550 -0.424710 0.643260 0.485470 -0.425360 0.257180 0.265800 0.586 0.586 -0.326 -0.510 -0.316 -0.316 0.348 -0.104 0.000 -0.394 -0.394 -0.391 0.000 -0.317 -0.317 0.000 0.643 0.443 0.871 0.105 -0.381 -0.425 0.257 0.095 -0.314 0.000 0.431 -0.330 -0.330 -0.534 -0.534 0.770 0.770 -0.361 1.009 1.545 1.545 0.861 0.861 0.186 0.186 0.586 0.586 -0.326 -0.510 -0.316 -0.316 0.348 -0.104 0.000 -0.394 -0.394 -0.391 0.000 -0.317 -0.317 0.000 0.643 0.443 0.871 0.105 -0.381 -0.425 0.257 0.095 -0.314 0.000 0.431 -0.330 -0.330 -0.534 -0.534 0.770 0.770 -0.361 1.009 1.545 1.545 0.861 0.861 0.186 0.186 8.1656673 NA 7.1331412 11.4439838 11.2272236 7.6537171 11.2061580 8.2709442 9.4282329 -1.1291027 13.4436286 11.3099530 5.3304795 NA 5.0409713 7.7414117 3.6783987 11.2577177 13.3390343 10.7783131 10.3427220 6.4484748 9.0003299 10.7980840 7.6292699 3.0409801 3.1929674 NA 10.1736858 2.3304724 5.4560077 7.6687084 5.7039368 11.1090484 10.4155283 2.9585086 9.9736787 NA 7.6622098 12.7034424 10.3103582 8.4217934 -1.1291027 6.9690791 7.9977514 5.9899882 3.0409801 -1.1291027 6.5220981 4.6259367 4.5714887 10.7015620 6.0902162 10.4967556 10.1788168 9.7846842 5.9154420 9.8317728 11.8967054 7.5575472 5.1564492 4.5989666 9.4653713 -0.1289449 -0.1289449 -1.1291027 6.0409713 10.259570 9.416011 8.070719 11.903781 11.031549 11.440902 7.652406 11.781127 8.265510 9.646657 13.672401 11.376858 8.482071 8.792888 2.192983 7.836831 9.794374 11.302806 12.900161 4.485755 13.810991 8.496756 7.267652 9.045973 9.392559 10.113292 7.588723 6.652406 11.233813 12.679106 -1.129103 10.214788 7.334571 9.113673 11.760551 10.819049 9.731358 8.625015 9.943179 7.518505 8.911337 10.941912 8.456009 10.693618 9.846895 12.381193 12.731649 10.081109 11.634674 7.668708 NA 9.480595 6.645307 9.684026 9.310878 10.101668 5.765864 12.039521 8.174827 7.334776 14.126075 10.893068 9.856889 11.701760 10.994522 6.346780 2.678410 9.640058 8.527472 10.404377 TCGA-PL-A8LX 35 0 NA 5 breast stage iv t4 n1a m1 female 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 4 5 1 2 1 1 3 4 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.6697882 9.1842039 11.6358879 8.1290764 9.0195123 8.6776506 11.4369453 9.2813090 10.1930074 13.1523968 11.3982144 10.5028167 -1.1677986 13.4698607 2.2916036 11.1322269 7.0219849 7.5221586 7.6523395 14.0397849 NA 15.1932132 -1.1677986 10.5151550 10.0585726 7.5702527 -1.1677986 8.5116404 9.9189601 -1.1677986 7.5498370 5.4468716 NA 4.3867489 10.0818665 9.1495731 10.6583116 7.8349754 9.5828674 11.2058413 1.1540647 6.5937123 14.3763702 8.5695093 11.9088090 11.6813700 10.3625668 2.6395100 NA 8.5326002 8.9729901 NA 10.0705651 10.4532965 4.0020814 3.9614474 9.4903720 11.3912984 10.5626305 10.5330336 12.3139598 8.9857125 10.2217918 10.2739478 9.8908286 10.5995173 4.5870469 11.1287898 12.9861873 1.6395100 10.6756889 8.8655833 3.8796078 4.5870469 11.4562704 9.9315081 11.1899873 8.7717397 -0.1677986 7.2028477 10.0871890 10.5740487 10.8307508 9.5986894 0.0259450 0.0286150 0.0132070 0.0081894 -0.3637500 0.7269600 0.0134860 0.0165590 0.0325560 0.0296440 0.0296440 -0.3621600 -0.7339000 -0.0364080 1.2616000 -0.7362600 0.0122300 0.0122300 0.0101390 -0.2440000 0.7309400 0.0030457 0.0030457 0.0030457 -0.3649900 -0.3649900 -0.3649900 0.4186400 -0.3627300 -0.3627300 -0.3424000 0.0132070 -0.3637500 -0.3613600 -0.2393300 -0.2393300 0.0134860 0.0165590 0.0165590 0.1017600 0.1064200 0.0325560 0.0000000 0.0000000 0.0059634 0.0059634 -0.7339000 -0.7339000 -0.0364080 -0.2666100 -0.7451200 -0.7451200 0.0122300 0.0122300 0.0122300 0.0101390 -0.7405800 -0.2347200 0.7137600 0.0099997 0.0030457 0.0030457 -0.3666900 -1.2929000 -0.3649900 -0.3933100 -0.3735900 -0.7517600 -0.7562500 -0.734 -0.734 -0.739 -0.739 0.000 0.000 0.000 -0.244 0.703 0.000 0.000 0.000 0.000 -0.368 -0.368 -0.365 -0.365 -0.363 0.000 -0.342 0.006 -0.374 -0.756 -0.345 -0.345 0.000 0.000 -0.364 -0.364 0.483 -0.239 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 -0.162 -0.162 -0.734 -0.734 -0.739 -0.739 0.000 0.000 0.000 -0.244 0.703 0.000 0.000 0.000 0.000 -0.368 -0.368 -0.365 -0.365 -0.363 0.000 -0.342 0.006 -0.374 -0.756 -0.345 -0.345 0.000 0.000 -0.364 -0.364 0.483 -0.239 0.000 0.000 0.101 0.101 0.000 0.000 0.000 0.000 -0.162 -0.162 9.9800013 NA 5.9301933 10.3664633 11.6549304 7.8982767 12.5585914 7.8152680 9.7928864 NA 11.4521511 11.5660104 4.8982519 1.4171099 4.2244802 8.2771753 6.5256477 10.2864597 10.5887167 10.9324942 10.0723555 NA 8.0293772 10.7017543 6.6650502 4.6135199 NA NA 9.3139598 4.6135199 6.6963472 7.5151550 5.5464068 11.8715490 10.2864597 4.6395158 8.6249508 NA 6.4760171 12.2426117 9.3339977 9.7754078 -1.1677986 0.8321204 8.0513291 0.8321204 5.0219860 2.6395100 2.1540971 5.2251631 0.4171639 10.3285148 NA 5.6523402 11.0312192 10.1450433 5.5736260 9.1187182 11.6005515 7.6135199 1.1540647 2.1540971 9.9202862 4.7148060 -1.1677986 6.5600806 0.8321204 15.482489 5.504585 8.549837 13.469861 10.471953 10.958219 14.039785 14.966186 8.605151 10.408645 12.280277 10.677650 8.532600 7.699439 -1.167799 7.457869 10.631037 11.0992396 12.5148259 7.1540890 13.1215280 8.1808888 3.4171234 9.3109299 7.9301927 10.4533835 6.8377843 9.5369287 11.3982144 9.0367316 7.9562815 10.4930476 4.5045886 6.6991921 8.9022813 10.2212540 10.9357760 7.9554285 9.5753118 9.1630773 3.2244725 10.4653691 10.6583116 9.7132743 10.2077429 14.8480110 9.2169442 9.7950563 10.9079738 8.0269173 0.4171639 9.1353248 4.9597933 8.9729901 1.1540647 10.0705651 4.1175621 11.6024113 9.4903720 6.6010071 13.3908896 10.7247032 9.2584252 12.8042427 8.4095891 -0.1677986 NA 9.4422624 9.6233233 9.7239442 TCGA-PL-A8LY 30 0 NA 8 breast stage iib t3 n0 m0 female 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 3 5 1 2 3 3 4 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.073038 8.877038 11.322200 7.049387 8.827491 9.110663 9.648193 9.748909 11.392324 13.566454 10.906545 10.535665 3.452450 13.100180 2.300446 10.743392 8.941095 9.341195 10.426866 11.688944 1.715498 13.272152 7.834427 10.029299 10.513147 3.522847 NA 11.489449 9.467030 2.830965 9.284075 8.058301 NA 1.937872 9.412453 8.966574 9.785159 10.429731 9.220636 10.362345 8.976013 10.145938 14.843749 6.829366 10.114942 10.404319 10.494111 6.606257 2.715476 8.058301 12.191219 NA 11.051248 6.037413 5.300450 3.130519 9.521767 12.210675 10.854611 11.908190 12.231678 9.377264 10.836156 10.754862 10.415347 10.724381 3.937881 11.168070 11.159811 NA 10.370122 8.955482 4.591596 2.300446 11.798744 9.614339 10.307320 8.560976 5.871991 10.056078 13.034123 12.867771 10.271992 10.248166 0.00194180 0.00277450 0.00263570 -0.00382460 -0.00064384 0.00346870 -0.00041585 -0.00041585 -0.00304750 -0.00304750 0.00569190 -0.00205570 -0.00205570 0.00318960 0.00318960 0.00318960 -0.00498440 0.00041593 0.00083195 0.00039377 0.00221930 -0.00697330 -0.00697330 -0.00697330 -0.00277070 -0.00277070 -0.00995650 -0.00290910 0.00194180 0.00194180 0.00444110 0.00263570 0.00694350 -0.00802440 0.00346870 0.00346870 -0.00041585 -0.00041585 -0.00041585 -0.01160100 -0.00636680 -0.00304750 -0.00138580 -0.00138580 -0.00138580 -0.00138580 0.00360760 -0.00016074 0.00638710 0.00318960 0.00069327 0.00069327 -0.00498440 -0.00040791 -0.00040791 0.00083195 0.00180300 0.00180300 0.00221930 0.00402430 -0.01177900 -0.00697330 -0.00069303 -0.00277070 -0.00995650 -0.00290910 -0.00041585 -0.00443120 -0.00443120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8.5292669 NA 6.1858051 11.2123396 12.4354450 8.1918133 10.9110631 8.5890324 9.1181996 -0.8695962 11.7853831 10.9195312 3.4524505 NA 1.1305356 8.5377911 3.8854084 9.8055983 11.0865365 10.2351221 9.6812702 0.7154541 8.3689281 11.1721825 5.9378787 3.7154871 -0.8695962 NA 10.3160183 5.5567881 7.4748189 7.8652328 9.3984803 10.5666675 9.9869489 5.2179868 9.3004484 NA 8.1473316 14.2053338 8.8257516 6.4614402 0.1305356 NA 7.9216862 4.5228404 4.8309651 -0.8695962 5.5228404 5.3805390 3.8309651 11.2751816 3.4524505 9.1459385 10.9665737 10.0016586 4.4524505 9.7276448 11.1824120 8.3326471 1.7154981 2.9378717 11.1156537 NA 4.2179829 NA 4.6851104 13.161739 6.290395 8.652124 13.100180 10.279635 10.661417 11.688944 11.455548 9.397310 10.029125 12.314934 12.725781 8.058301 7.988505 3.589955 7.788735 9.808243 10.984613 12.341499 5.700379 13.920209 8.728576 6.837883 9.477037 8.023734 9.834228 6.470374 6.359342 10.906545 5.589955 5.589955 9.816148 10.905310 7.918197 12.000888 10.138251 10.094864 8.983833 10.306697 7.013166 5.802948 10.486447 9.785159 10.519617 10.365939 10.836588 10.091973 9.882067 10.589443 7.763518 NA 9.553828 6.300448 12.191219 7.158429 11.051248 3.037417 11.076699 9.521767 6.715486 15.618803 10.377264 10.604229 12.489724 10.796747 2.300446 NA 9.462560 9.138952 9.187161 TCGA-PL-A8LZ 29 0 NA 302 breast stage iiib t4b n2 m0 female 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 4 3 NA NA 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.8711030 9.3751118 11.4645925 8.5256296 8.6412353 9.8478920 8.7367537 10.4930847 10.9882493 11.6894120 10.3488973 10.4017695 1.7723924 10.6155488 1.5797594 10.8887569 6.1986768 8.9272310 9.2359374 7.4448385 -1.2276920 10.5586825 8.3308335 9.7840806 10.3531426 5.3270011 1.7723924 12.5087705 10.7038891 -0.2275231 8.4518931 8.6519963 NA 5.9818663 10.0042341 9.5773506 9.0238954 9.2682681 9.5045803 10.8548946 -0.2275231 4.9818663 14.5878213 8.3954532 9.9769841 10.7546935 10.0960307 4.6303938 NA 10.3403690 11.5859937 NA 9.8276954 5.9915808 7.3193072 6.8598764 9.7989364 11.6685561 9.9628550 10.9373199 12.4986311 7.3834373 10.1609685 10.1885560 11.1247323 10.6131909 5.2153563 11.5893966 8.1277638 -0.2275231 10.7829411 8.9879458 3.9053990 5.8704461 11.3632338 9.7589660 10.9529437 9.3403691 3.7724136 7.4054078 13.2608807 11.7845136 9.7759309 9.8763564 0.983020 0.394080 -0.033035 1.394000 -0.015259 -0.042868 0.127750 0.218420 -0.040248 -0.040248 0.484010 0.903050 -0.046154 0.456440 0.385710 0.385710 -0.035488 -0.035488 -0.062655 -0.036713 -0.058797 -0.067630 -0.067630 0.423300 0.297190 0.297190 0.297190 0.163200 0.162610 0.125450 0.061610 -0.033035 -0.334530 -0.033136 -0.100960 -0.100960 0.127750 0.228400 -0.298660 0.212800 0.090534 -0.040248 0.771510 0.771510 -0.047434 -0.061495 -0.046154 -0.092912 0.365540 0.385710 0.420280 0.420280 -0.035488 -0.035488 0.431370 -0.033717 -0.036713 -0.051576 -0.047299 0.417260 -0.067630 -0.067630 -0.176300 -0.109890 0.297190 0.388440 -0.034398 -0.245360 -0.344870 0.000 0.000 0.454 0.454 0.000 0.000 0.000 0.000 0.000 0.183 0.183 0.000 0.000 0.694 0.000 0.297 0.297 0.931 0.931 0.163 0.163 0.000 -0.149 0.211 0.211 0.000 0.318 -0.271 0.000 0.000 0.000 0.228 0.228 0.000 0.000 0.000 0.000 0.772 0.000 0.134 0.134 0.000 0.000 0.454 0.454 0.000 0.000 0.000 0.000 0.000 0.183 0.183 0.000 0.000 0.694 0.000 0.297 0.297 0.931 0.931 0.163 0.163 0.000 -0.149 0.211 0.211 0.000 0.318 -0.271 0.000 0.000 0.000 0.228 0.228 0.000 0.000 0.000 0.000 0.772 0.000 0.134 0.134 8.2359372 NA 6.4866581 11.0566587 12.0102204 5.8013139 11.1466373 10.2033672 9.1281604 -1.2276920 12.0951861 11.7247392 3.5797715 NA 3.7724136 8.9634721 3.6303938 12.2862639 11.7262456 11.4361934 10.2627625 -1.2276920 9.1976288 9.8120175 7.8835487 6.8003188 NA -0.2275231 11.1978911 3.0943374 6.4162689 8.7864333 6.8861550 10.8819890 10.4189716 2.3573831 9.5180872 3.2318471 8.3173773 11.3144775 8.4900895 9.4017695 -0.2275231 2.4728516 8.2542123 0.3573831 3.4162723 -1.2276920 7.2153563 2.9511215 3.6303938 10.3634677 4.0578141 9.7871309 11.1172636 9.2297939 5.9221598 10.5105052 14.4556269 10.2430718 5.0761956 4.5537721 9.4693805 1.3573831 -0.2275231 -1.2276920 6.4728533 11.352358 8.590995 8.064735 10.615549 9.764643 10.896534 7.444838 9.225684 8.973312 10.012608 13.848268 11.207823 10.340369 6.859876 2.579759 8.153956 10.692394 11.277728 11.984605 4.630394 13.433577 8.812703 7.547200 9.199726 8.286140 9.864926 8.688292 6.822261 10.348897 10.972085 4.198675 10.509238 4.726608 10.309257 11.820048 10.580975 10.127213 7.530637 9.110035 9.297934 7.901696 10.433937 9.023895 10.757899 10.225684 10.251688 11.177820 10.684928 10.500333 9.126662 NA 10.344483 7.215356 11.585994 7.974537 9.827695 6.272258 10.800878 9.798936 8.733863 12.792872 10.574525 10.826000 12.659538 11.251688 6.648930 2.264266 9.875045 9.738197 9.204955 TCGA-S3-A6ZF 64 0 NA 572 breast stage iia t2 n0 m0 female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 2 NA NA 1 2 1 5 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.78849437 10.05268949 11.65009285 9.32845974 8.21580574 9.14138553 9.86723008 9.76362901 9.47950402 13.83188123 11.15973210 10.46045723 4.39403390 12.75837152 2.91758451 9.29414375 4.78635066 8.44115560 9.49074681 12.63280956 5.35981631 13.53242344 7.47883998 9.57461831 10.73721734 7.55137836 2.78634544 10.29452116 11.47817564 -0.02107222 8.24734130 7.48678918 12.92894241 3.97899182 10.64433004 11.10290000 9.90430134 10.57704667 9.75652347 11.27667468 0.71598120 10.50614530 14.17341757 9.40938393 9.41431717 10.97381896 11.28695384 3.64196213 1.56393907 9.24812089 10.82003429 -0.60603472 10.83593836 7.21739844 6.51297270 5.40525721 10.76308361 12.38750081 10.06822393 11.72186495 12.86335549 9.15724410 10.50059454 9.85192546 11.31177664 10.46079354 4.62284838 11.62959719 11.15308761 NA 10.46314567 9.25356648 4.69488576 6.67480242 9.95722787 9.98882270 10.05536433 9.59063383 1.39402017 7.13886565 11.98356576 10.75515297 9.61138358 8.73388170 1.044100 1.050100 1.079500 0.361490 -0.014916 0.000000 0.160400 -0.434420 3.656900 0.362310 1.129400 0.443920 -0.026614 -0.417290 0.652950 1.984000 0.436990 0.436990 0.007500 1.605300 -0.100260 0.054660 0.054660 0.054660 -0.376730 -0.376730 1.046000 1.066300 -0.410450 -0.438970 0.025671 -0.432680 -0.413660 -0.014916 0.000000 0.000000 0.160400 -0.434420 -0.434420 0.521880 0.012097 0.026092 0.399440 0.399440 -0.417180 0.944660 -0.026614 -0.027671 -0.417290 0.652950 -0.431700 -0.431700 0.436990 0.436990 0.436990 0.007500 -0.402190 -0.402190 -0.100260 -0.398150 -0.400610 0.054660 -0.410030 -0.376730 -0.376730 0.020903 -0.122130 -0.379660 -0.379660 0.000 0.000 -0.417 -0.417 0.437 0.437 0.000 -0.402 -0.100 0.000 -0.396 -0.388 0.000 -0.410 -0.410 -0.376 -0.376 -0.410 0.617 0.994 0.994 -0.122 -0.380 0.000 0.000 0.361 0.361 0.000 0.000 0.000 0.000 0.160 -0.274 0.450 0.450 0.000 0.336 0.399 -0.008 0.121 0.121 0.000 0.000 -0.417 -0.417 0.437 0.437 0.000 -0.402 -0.100 0.000 -0.396 -0.388 0.000 -0.410 -0.410 -0.376 -0.376 -0.410 0.617 0.994 0.994 -0.122 -0.380 0.000 0.000 0.361 0.361 0.000 0.000 0.000 0.000 0.160 -0.274 0.450 0.450 0.000 0.336 0.399 -0.008 0.121 0.121 7.9581809 NA 7.4052589 10.5051674 11.1963460 6.8870463 11.7392983 9.1420399 8.7309286 -1.6060347 12.2782976 11.7805907 3.6034899 -1.6060347 2.9175845 8.0105807 3.8534668 10.5019026 11.8828760 11.1706703 9.4848058 0.3940751 9.5226704 10.0247538 7.1589035 5.4164007 1.2013829 NA 10.6811668 8.7537813 6.2269208 8.6525976 7.8307434 10.1668822 10.1762108 3.7515815 9.3394755 -0.6060347 7.6817437 11.5260493 9.4226285 7.6180330 NA 4.4814927 8.5776671 2.2013829 3.8534668 -0.6060347 5.9409255 5.4951131 3.3482324 10.5339027 -1.6060347 7.8677371 10.1112797 10.4884393 6.7383274 11.0080512 12.9238892 8.6144099 5.5437773 3.9789918 12.4623901 2.7159592 NA 0.3940751 2.7159592 13.142737 6.388386 8.080532 12.758372 9.942054 10.958657 12.632810 11.451685 10.121527 10.976174 13.495474 10.421592 9.248121 9.194123 1.715981 7.520736 12.372742 10.504189 12.454812 6.841115 12.869384 8.398252 6.168819 9.282775 9.308417 10.784601 7.797043 7.525889 11.159732 6.523314 1.715981 11.073512 4.066460 8.611953 10.101391 9.999511 10.550747 8.275146 8.736106 11.826182 6.258217 11.853757 9.904301 9.889887 10.076148 11.322365 10.213412 10.478840 11.245000 8.553903 NA 9.532227 7.476181 10.820034 7.059367 10.835938 6.769071 11.043874 10.763084 7.318903 13.258266 10.014710 9.600436 12.776791 10.163870 6.637206 3.438426 10.190477 10.079657 10.184787 TCGA-S3-A6ZG 71 0 NA 562 breast stage iib t2 n1 m0 female 2013 NA yes mixed histology (please specify) 1 black or african american not hispanic or latino NA NA 1 2 2 2 4 4 3 3 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.5534152 9.7905723 11.7719105 9.8820934 8.5996678 9.6868578 10.4922619 9.6260980 9.2377604 8.7690775 12.4083476 10.4981842 6.5428988 12.8966210 3.3188952 8.8027128 7.0969744 8.5356428 10.4410780 13.0756619 1.4888235 13.6082316 5.4274218 9.8812731 11.1376790 5.3849857 -0.6810758 9.6648567 10.8120020 2.3188952 7.2846816 5.8345975 1.1262460 5.0603630 10.1141251 11.2604950 11.1100600 11.6787839 10.2577415 11.0891481 -0.6810758 11.8486937 14.0238544 8.5561071 10.3343122 11.6153832 11.3148409 4.4063598 -0.6810758 8.7976667 11.2150403 -0.6810758 10.1529731 6.9663555 6.0603630 5.4888235 9.7976667 12.4626789 10.7558688 12.5315455 12.9715180 8.2628771 10.7122875 10.9221595 11.2340295 11.0446894 5.9913223 11.9013920 11.3564440 -1.6813072 10.1108740 9.1262520 4.2991494 5.4988061 11.4988062 10.4090095 10.3853227 10.1270568 3.3188952 9.5283506 12.6951582 11.3262749 9.9806753 9.3721442 1.155800 1.022800 -0.135230 -0.137590 0.337880 0.340150 -0.190240 -0.194640 0.339340 0.339340 0.339340 -0.122780 -0.122780 -0.126290 3.656900 -0.642740 0.341770 0.341770 0.235350 0.347130 -0.241310 0.273630 0.273630 0.323820 0.511240 0.277630 0.277630 0.437830 -0.144380 -0.144380 0.000000 -0.137590 0.337880 0.337880 0.340150 0.340150 -0.170310 -0.190240 -0.194640 -0.132900 -0.132900 0.339340 -0.087447 -0.087447 -0.087447 -0.111680 -0.122780 -0.122780 -0.126290 -0.640760 -0.632060 -0.632060 0.341770 0.341770 0.341770 -0.738880 0.347130 0.347130 -0.244690 -0.649600 0.273630 0.273630 0.265610 0.497530 0.277630 0.437830 -0.635570 -0.122910 -0.122910 -0.123 -0.123 -0.632 -0.632 0.342 0.342 0.235 0.347 -0.241 1.031 -0.633 0.324 0.324 0.266 0.266 0.498 0.278 1.011 1.156 0.438 0.438 -0.636 -0.123 0.000 0.000 -0.138 -0.138 0.338 0.338 0.340 0.340 -0.190 -0.190 -0.133 -0.133 0.339 0.339 0.000 0.000 0.000 0.000 -0.123 -0.123 -0.632 -0.632 0.342 0.342 0.235 0.347 -0.241 1.031 -0.633 0.324 0.324 0.266 0.266 0.498 0.278 1.011 1.156 0.438 0.438 -0.636 -0.123 0.000 0.000 -0.138 -0.138 0.338 0.338 0.340 0.340 -0.190 -0.190 -0.133 -0.133 0.339 0.339 0.000 0.000 0.000 0.000 8.02452968 -0.68107584 4.48882346 10.61753248 11.32785092 8.02656660 11.45620850 7.98330888 8.73535699 -0.09619044 12.98684022 10.99973792 4.24963496 4.10025444 3.96275260 8.48002918 4.27309063 10.27382042 10.86555049 11.14822342 9.55491131 1.90384811 8.60198541 9.85563004 6.86192932 3.99132683 4.10025444 NA 11.00254972 6.43783861 7.10679951 7.00189117 5.92622719 10.38359609 10.67094051 4.36329025 9.31183549 -0.09619044 6.33570477 12.38018392 9.48631536 6.86579141 -1.68130717 0.64080600 8.72722684 2.22579934 3.56682733 1.31892416 5.39571406 7.00669298 3.77832424 10.34438280 -0.09619044 6.80673778 10.32837581 9.99088043 4.31889525 9.53806571 12.15069916 8.21068060 4.07378596 3.52834627 11.71964315 1.12624604 NA -0.09619044 NA 15.322495 5.794632 8.683032 12.896621 10.776278 10.661805 13.075662 12.762359 8.550478 11.101076 13.085219 11.067090 8.797667 9.403041 1.640806 7.384987 11.370786 10.8621706 12.1715242 6.7535257 12.7343062 8.8326249 6.1643881 9.6764492 9.6481328 10.4256759 7.4507543 8.8316376 12.4083476 6.3632920 3.3188952 11.3927040 6.2076411 7.4337849 10.6601379 10.1764895 11.1484217 7.6317802 8.4103326 12.5711190 6.6272362 11.3760461 11.1100600 10.7553484 9.2803467 10.6604160 9.7383306 10.1334795 10.5950215 8.7346388 NA 8.9746693 5.7445755 11.2150403 6.8849507 10.1529731 6.4838045 10.5976369 9.7976667 7.6544212 13.7017238 10.3315216 9.6396976 12.6100678 11.1078193 -0.6810758 1.7505208 10.3478391 10.4368649 10.1080232 TCGA-S3-A6ZH 29 0 NA 641 breast stage iiic t3 n3a mx female 2013 NA yes infiltrating ductal carcinoma 14 black or african american not hispanic or latino NA NA 1 2 1 2 1 4 4 8 6 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.3028760 9.8625603 11.9530059 9.1676008 9.1887770 9.2034946 10.7027271 10.3057507 9.3985460 16.0112554 12.1557006 11.4948916 -0.6668053 13.6413622 4.5810559 8.6674032 5.5030561 8.0627504 6.2460185 12.4432052 0.9180809 13.6854147 2.6550541 9.2656029 11.5527521 8.6266016 2.0335816 8.8408651 9.9570113 0.3330802 7.4468724 7.6950737 -1.6670343 3.1911046 9.7976756 10.9344364 9.1332208 12.3935724 9.5340283 11.4247305 1.3331375 11.4509352 14.6027496 6.9795807 8.3274830 10.5541127 11.1255134 3.6906853 0.6550770 9.2527380 10.8739843 -0.6668053 9.0064389 3.5810620 5.9551826 5.0055572 8.4403468 12.0774381 10.2058047 12.8410483 12.9441546 6.9404604 10.6920557 10.7735033 11.7189922 10.7902542 5.8877178 11.3629347 13.3929812 -0.6668053 10.2138612 9.3331299 3.0357822 4.1404842 10.0636000 9.6086723 10.3955134 9.6707517 1.1405169 10.0104089 12.4169415 10.8982319 10.1481127 9.2400204 1.020800 1.158200 0.098753 0.137070 -0.265850 0.116430 0.090912 -0.734650 -0.763780 3.656900 0.116580 0.075174 -0.769430 0.097735 3.656900 -0.745400 0.090789 0.084978 -0.727630 0.082523 0.042211 0.345400 0.345400 0.345400 -0.490960 0.644020 0.580470 0.019202 -0.422730 -0.301060 -0.377030 -0.753300 -0.300120 -0.265850 0.140480 0.140480 0.090912 -0.734650 -0.755360 0.104870 0.104870 -0.764810 -0.311980 -0.311980 -0.311980 -0.417940 -0.739380 -0.777210 0.097735 -0.824530 -0.761810 -0.761810 0.090789 0.084978 0.084978 -0.727740 0.082523 0.082523 0.042211 0.755340 -0.836850 0.345400 -0.288530 -0.490960 0.644020 0.021228 0.120690 0.308300 -0.398880 0.000 -0.739 -0.762 -0.762 0.000 0.000 -0.728 0.000 0.000 0.755 0.755 -0.491 0.345 -0.311 -0.311 0.153 0.644 0.898 1.199 0.000 0.000 0.000 -0.436 -0.299 -0.299 -0.609 0.137 -0.266 -0.266 0.116 0.116 0.000 -0.708 0.105 0.105 -0.764 -0.647 -0.312 -0.312 -0.150 -0.150 0.000 -0.739 -0.762 -0.762 0.000 0.000 -0.728 0.000 0.000 0.755 0.755 -0.491 0.345 -0.311 -0.311 0.153 0.644 0.898 1.199 0.000 0.000 0.000 -0.436 -0.299 -0.299 -0.609 0.137 -0.266 -0.266 0.116 0.116 0.000 -0.708 0.105 0.105 -0.764 -0.647 -0.312 -0.312 -0.150 -0.150 8.6561846 NA 5.0473770 9.9841815 11.7429185 6.7259197 11.7116956 7.8028123 9.9710272 3.7925639 12.4722814 11.6391003 2.4205902 2.2400090 2.7254576 7.0880175 3.5810620 10.2638672 10.9783379 11.4062672 9.4694802 0.3330802 8.1864391 9.3890901 6.1660204 3.0880228 0.9180809 -1.6670343 10.8254838 1.9180809 4.8409264 7.2727091 5.8877178 10.5497271 10.4494738 3.1404842 10.5220277 0.9180809 5.5905182 11.8299836 8.0387621 6.6595593 NA 7.7925613 9.4462209 NA 2.1404842 -1.6670343 7.2034948 4.4435337 3.7925639 10.6983586 2.7254576 6.3161240 10.7411941 10.1872189 3.0880228 9.4039217 12.1141821 8.3679288 2.3331375 3.1911046 10.4252262 -1.6670343 NA 3.2873245 -0.6668053 15.465318 7.307544 8.750982 13.641362 9.437073 11.129778 12.443205 10.850061 8.851616 10.860362 13.179306 10.362417 9.252738 6.431162 2.420590 8.301797 12.276835 10.6528020 12.2653446 8.5751130 12.9523749 8.8867592 5.1660204 9.2004085 10.2679264 10.5069943 6.3829784 8.7361418 12.1557006 6.3554973 3.1911046 9.9850784 4.0610503 9.2924001 9.4598342 9.4112807 11.0026792 9.4771507 9.1996360 12.9199696 5.0880186 10.1504333 9.1332208 10.5164551 9.3450559 10.6363398 9.5804640 10.1876087 10.3901062 8.9349007 0.9180809 8.7731270 6.8982313 10.8739843 5.4726827 9.0064389 4.4416561 10.2686633 8.4403468 7.7864003 13.0964978 10.2785736 9.7588703 13.0775958 10.6300460 2.2400090 1.6722896 10.4637004 10.6083813 9.2763773 TCGA-S3-AA0Z 63 0 NA 629 breast stage iib t2 n1a m0 female 2013 NA no infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 3 4 1 2 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.9383417 10.2774949 12.2702093 9.9800466 8.0262783 8.9241676 10.7201409 9.7405058 10.2956970 10.8623246 11.2309588 10.1980980 1.0394894 12.6538914 2.1549720 10.9483812 5.2358840 10.0413655 8.0562968 3.6639821 NA 10.4318058 9.1943065 9.9569350 12.3714316 5.0243817 0.7764409 10.3882164 10.6443503 2.8468343 8.6257026 8.0729113 NA 4.8974679 9.8901960 9.9312720 8.4072669 9.4906995 10.0747456 10.4841581 6.3187127 5.3000175 15.3208871 9.1863708 9.4955003 10.9931997 12.3460247 4.4087254 NA 9.9985243 11.1408075 NA 11.2012500 4.6244519 7.0618561 7.3187118 11.2407954 12.0910371 10.1028834 13.0314825 12.7775102 9.2135818 11.1661928 10.9215632 11.0184370 11.3474480 4.8974679 11.7699584 9.3681633 4.5419856 10.2671042 9.2035572 5.3999708 4.4087254 12.2431422 10.0752038 9.8639168 9.7042319 3.6244519 10.4786266 13.7220806 12.1512760 9.9538734 10.1055775 2.0784000 2.0784000 -0.0073339 1.4550000 -0.0236900 0.0100060 1.3851000 0.6033800 0.0214630 0.0214630 0.0241080 1.5011000 -0.0052878 0.0182430 0.0182430 0.0182430 -0.0065050 -0.0065050 0.0511030 -0.7898400 0.0000000 -0.0150540 -0.0546890 -0.0289010 3.6569000 -0.0538810 -0.0538810 0.0061193 -0.0295290 -0.0030475 -0.0479850 -0.0073339 -0.0091286 -0.0204120 -0.0026322 -0.0026322 1.3851000 0.6180600 0.6193300 0.7637000 -0.7912600 0.0214630 1.5514000 1.4912000 0.7671500 0.7638800 -0.0052878 -0.0181390 0.0182430 0.0182430 -0.7908800 -0.8478100 -0.0065050 -0.0065050 -0.0150540 0.0498240 -0.7898400 -0.8184300 0.0190830 -0.8601800 -0.0342230 -0.0546890 -0.0018014 -0.0686630 -0.0538810 -0.8704600 0.7833100 0.0397610 0.0213230 1.452 1.452 0.000 0.000 0.000 0.000 0.000 -0.757 0.000 -0.788 -0.788 0.000 0.000 0.000 0.000 3.657 3.657 0.000 2.078 -0.798 -0.798 0.783 0.000 0.000 0.000 0.000 1.389 0.000 0.000 0.000 0.000 1.368 0.618 0.764 -0.016 0.000 0.000 1.491 1.491 0.139 0.139 1.452 1.452 0.000 0.000 0.000 0.000 0.000 -0.757 0.000 -0.788 -0.788 0.000 0.000 0.000 0.000 3.657 3.657 0.000 2.078 -0.798 -0.798 0.783 0.000 0.000 0.000 0.000 1.389 0.000 0.000 0.000 0.000 1.368 0.618 0.764 -0.016 0.000 0.000 1.491 1.491 0.139 0.139 8.41742175 1.03948937 6.20941242 11.18350916 11.59231748 7.98863413 12.31425468 7.79968701 8.61338800 1.03948937 12.74842846 12.65720904 10.26026965 NA 4.81207716 8.96132930 4.64435239 11.76627410 11.24467060 11.76072993 10.03006497 -0.54540294 8.91190665 10.63505656 6.85113061 11.47150813 -1.54540294 NA 10.56924414 1.03948937 10.85593863 8.76172674 6.33104232 10.83299133 11.60443166 3.40872545 10.23629529 3.15497199 6.66884528 12.16640781 9.69710449 7.60681085 -0.54540294 1.45454442 8.63692002 6.22931297 1.91395211 -0.54540294 5.59407673 2.54198558 8.02438119 11.02627845 5.49892099 6.43751906 11.48898088 10.10960921 5.57346542 10.03572631 13.07732119 7.70719138 4.33716873 4.18244600 10.28067706 -1.54540294 9.65051309 0.03941918 4.23588786 12.837974 6.872378 8.229313 12.653891 10.249348 11.242224 3.663982 8.555188 9.406539 10.946880 13.466059 11.923913 9.998524 8.415975 NA 7.709555 10.350101 11.949756 11.715739 3.812077 13.893901 8.352371 6.255425 8.886023 9.635057 11.169763 7.507094 5.711913 11.230959 11.510147 4.776451 10.216077 5.739929 8.258657 11.610135 10.221055 9.315613 7.206070 8.569569 9.316388 7.185845 12.416931 8.407267 9.648051 10.496869 11.257244 12.663217 10.886285 11.552393 8.673694 9.092962 9.035208 11.198876 11.140807 7.539334 11.201250 8.318712 11.875723 11.240795 8.416410 12.756165 10.091603 9.567617 12.924803 11.302170 3.702458 2.361403 10.227665 9.214414 10.406903 TCGA-S3-AA10 65 0 NA 586 breast stage iia t2 n0 m0 female 2013 NA no infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 4 1 2 5 5 2 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.5764936 8.8726339 11.6837245 9.5022815 8.4514741 8.7353922 9.1919413 10.5460345 11.5090349 12.3243088 11.1853687 10.4060662 -0.2332776 12.0090064 3.0146588 9.6208146 6.3213148 7.4809711 10.3712786 4.8328141 NA 9.2148417 8.2645772 10.1048936 10.6638146 5.1065745 0.3517414 9.8709901 11.2885712 -1.2331081 9.3498082 7.3441539 NA 6.7382693 9.4132841 10.1887902 8.8124851 9.2148417 9.1428509 8.7382690 2.0886505 7.5578887 15.1929902 9.5663309 9.4373817 10.6645709 10.2449895 4.6736186 NA 9.1374128 9.9509810 -0.2332776 10.6165215 6.1154536 7.8726343 6.1065745 10.2205105 12.1501598 9.5048178 11.4597768 12.8131674 5.8001492 10.8598128 11.0334359 10.5211954 11.6685351 4.8752493 11.5896945 10.1777067 1.7667224 10.4051614 10.4606480 3.1556035 5.6122168 9.5956553 11.3403727 11.1710687 10.3694243 2.2261694 5.9366497 13.0310214 11.9105869 9.5014352 9.5123997 0.9223400 0.2773000 0.0417770 0.2570300 0.7494200 -0.3603100 0.3050900 -0.3323400 0.9879000 0.9879000 1.6594000 1.4517000 0.2669100 -0.0928410 -0.0831670 -0.0831670 0.8229900 0.7668100 1.7511000 -0.3374200 -0.3486700 -0.3392600 0.3337100 0.3753300 0.1639700 0.2526500 0.2526500 0.2790300 0.0297820 0.1010700 0.2070600 -0.3274800 -0.6749700 -0.3518800 -0.3275900 -0.4578700 -0.3246900 -0.3323400 -0.3046000 0.2847300 -0.9710100 -0.4654400 0.0000000 0.0000000 0.0000000 -0.0088181 0.2798300 0.8408500 -0.0632670 -0.0831670 -0.0413970 -0.1066700 0.8229900 0.2151800 -0.3471900 -0.3495900 -0.3301400 -0.3442200 -0.3241100 -0.5587600 -0.3392600 0.3337100 0.2557800 0.1639700 0.2526500 0.2790300 0.2009500 -0.2988300 -0.2988300 1.452 0.234 0.000 0.000 0.222 0.222 -0.350 -0.337 -0.324 -0.337 -0.337 -0.031 0.308 -0.060 0.278 0.164 0.164 0.000 0.000 0.279 0.279 0.201 -0.299 0.207 0.207 -0.327 -0.091 -0.346 0.329 -0.339 -0.339 0.265 0.265 -0.335 -0.335 0.988 0.988 0.000 0.000 0.000 0.000 1.452 0.234 0.000 0.000 0.222 0.222 -0.350 -0.337 -0.324 -0.337 -0.337 -0.031 0.308 -0.060 0.278 0.164 0.164 0.000 0.000 0.279 0.279 0.201 -0.299 0.207 0.207 -0.327 -0.091 -0.346 0.329 -0.339 -0.339 0.265 0.265 -0.335 -0.335 0.988 0.988 0.000 0.000 0.000 0.000 7.3403727 NA 6.2096698 10.2490293 11.3099990 5.4287889 10.8398629 9.7508875 9.4563392 -1.2331081 12.4573783 11.6408173 2.5740773 NA 3.6247092 8.8408670 4.6493683 11.9514459 11.4918786 11.4623888 9.1471866 -1.2331081 8.5365631 10.2235932 8.7468650 1.5741015 2.6736243 -0.2332776 10.1115761 2.2261694 5.9366497 8.7890934 3.9366474 11.1819496 10.7379097 3.4105853 10.7059373 2.9366474 7.8028989 12.3110862 8.1220763 8.3591825 0.3517414 4.3516849 7.4636927 4.3213148 -0.2332776 -0.2332776 7.9011517 1.1754288 6.0976424 12.3512182 7.9491199 5.7554111 11.0627813 9.5964483 6.7946316 10.6558491 14.7341093 9.5257813 6.6915384 5.0705053 9.4971956 2.9366474 4.5740833 0.3517414 6.0886526 12.117388 9.485258 8.612215 12.009006 10.886315 10.711438 4.832814 11.097362 8.985894 11.278478 13.952840 13.480112 9.137413 7.453226 3.159048 8.453226 10.541513 11.025586 11.432505 1.766722 13.506716 8.541513 9.228205 9.254565 9.699678 10.210736 8.970073 7.188791 11.185369 11.257075 -1.233108 9.944768 5.875249 8.800520 12.821415 11.274025 9.674367 8.072787 9.944145 8.361050 9.676619 10.311825 8.812485 10.131954 9.951601 11.278725 12.268563 11.201093 11.182731 9.231271 NA 9.936895 6.666203 9.950981 9.920278 10.616521 5.508191 11.415083 10.220510 8.584589 14.164927 10.820991 10.330398 13.036291 11.679989 7.014653 3.226154 10.416880 9.032341 9.296156 TCGA-S3-AA11 67 0 NA 421 breast stage iia t2 n0 m0 female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 3 1 1 2 1 1 3 8 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.5616013 9.4560556 11.9482128 8.9049130 8.3510342 9.3272859 11.2845042 9.7370758 9.6607411 14.2192333 11.1386260 10.7745119 3.5298709 12.9326398 2.4144062 9.5367931 7.7212175 8.6303338 9.8948500 13.9157775 1.1513393 13.6388504 5.0582515 10.0928206 11.0600549 6.5573549 -0.1705563 7.1148365 11.2109769 0.4143521 9.2174513 6.4367648 -1.1707187 2.5298709 9.9451279 10.1703967 10.3122419 11.4599286 10.4256237 11.4475900 2.2888605 12.3399509 14.7918329 8.9134717 10.7579153 11.4856353 11.0489050 5.5018595 5.8847176 8.3608155 11.5458247 NA 9.5641436 3.7836348 4.0388839 3.4732934 10.0333937 12.3374763 10.6432151 11.6341700 12.8725467 8.2001213 10.5058318 10.3777743 11.0489050 10.8830205 4.7363235 11.1061399 11.9514530 NA 10.5755283 8.3352456 4.6391048 2.9168970 11.0281859 10.3267869 10.4533154 9.2483406 3.2217534 9.2619759 13.1746312 10.8830205 10.6760996 10.0576514 0.66882000 0.66882000 -0.00324830 -0.02013800 0.00000000 0.00055459 -0.00193990 -0.00679570 0.01810300 0.01810300 0.01810300 0.00000000 0.00000000 0.00499690 0.00499690 0.00499690 -0.00346270 -0.00346270 -0.00097017 0.00013863 -0.00207840 0.01502800 0.01502800 0.01502800 -0.00899060 -0.00899060 -0.00899060 0.00124810 -0.00277070 -0.00277070 0.03740200 -0.65919000 -0.00682040 -0.00027724 0.00055459 0.00055459 -0.00193990 -0.00193990 0.00638710 -0.00083160 0.00124810 0.01810300 -0.00207840 -0.00207840 -0.00207840 -0.00207840 -0.79779000 0.01880300 0.00499690 0.00499690 -0.07806400 -0.07806400 -0.00346270 -0.00304750 0.00263570 -0.01031700 -0.00270740 -0.00270740 -0.00207840 -0.00138580 -0.01837300 0.01502800 0.00221930 -0.00899060 -0.00899060 0.00124810 -0.00636680 -0.01202400 -0.01202400 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 8.6140690 -0.1705563 6.2044733 11.5673150 11.2575323 9.0380342 11.9055815 8.1395242 9.4088159 2.9168970 11.4535440 10.7870257 4.5843192 2.9993506 5.4293482 8.3647094 3.0773626 8.9804504 11.6307381 11.1572672 9.1792679 6.8792830 8.7196982 9.7378265 5.1513637 5.3529950 NA -1.1707187 9.8441518 4.6874135 6.4804849 7.6042211 6.3608155 10.9736684 10.5839039 2.9993506 8.9728173 -1.1707187 7.3840230 12.4495392 10.6524030 7.0388872 NA 2.8294437 7.4218906 3.7836348 3.0773626 -1.1707187 2.7363235 7.1343555 1.6367754 10.5607530 1.4144062 6.7363248 10.6729625 9.4560556 2.6367986 9.3520154 12.5192136 6.5641434 2.9993506 3.0773626 11.7257663 1.6367754 NA 1.9993506 -1.1707187 13.443101 5.989305 8.434913 12.932640 10.598032 10.365681 13.915778 12.183959 9.672515 10.531174 12.548716 9.688969 8.360815 8.464245 4.829434 7.191378 11.244383 11.4683223 12.4055639 8.2888656 13.2873239 8.7586923 7.3608155 8.9235117 8.0985606 10.9044584 5.3372294 10.4358392 11.1386260 6.2970391 1.9993506 10.5793034 7.3252893 8.5998995 10.2760004 10.2104361 10.8853942 7.9008964 9.4983189 10.4560556 3.5843252 13.0848830 10.3122419 10.4002384 10.3935834 11.4694529 9.5859902 10.0291062 10.5826506 8.5859904 9.9760027 9.9406870 6.6984421 11.5458247 4.3840222 9.5641436 6.0388883 11.4360705 10.0333937 7.3411870 13.6292721 10.0018615 9.8853942 12.8702374 11.3729492 0.4143521 NA 10.4321328 10.2319131 10.4288819 TCGA-S3-AA12 82 0 NA 574 breast stage iiia t3 n1a mx female 2013 NA no infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 1 1 2 2 1 1 3 4 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.44088308 9.08447491 12.17270339 8.92347398 8.40327454 8.49625341 11.02092141 8.37374477 9.91544471 12.67809178 11.37107843 10.21687945 2.67118013 13.82101718 3.29266397 7.18505183 5.91324607 8.29940769 9.21390666 13.37141199 -0.02929357 15.46852213 NA 10.27506689 11.77244102 10.10515895 1.55571801 8.05021761 9.08967372 -0.02929357 8.33048221 5.60008833 NA 2.97072484 9.82637990 9.52244088 10.09614613 11.49036891 9.12301741 10.79886916 NA 11.18656896 14.62245709 6.28007291 11.47256981 11.47778396 10.48050769 3.77808239 NA 7.75209225 8.47654411 NA 9.82326214 10.75822713 3.77808239 3.61459207 9.39594857 11.86137693 10.09291356 10.22635138 12.77314805 7.86555018 10.69524648 10.48313729 10.69609895 10.98928060 4.43016482 11.17071163 12.62111129 -0.02929357 10.29435045 8.50795119 3.50179579 3.29266397 10.47306725 9.80520377 10.02330069 9.95870713 0.97070643 8.06349000 11.65679541 9.54153710 10.09679183 9.91251395 -2.9091e-03 9.1299e-01 5.8309e-03 3.7503e-03 9.3098e-03 -1.7803e-02 2.4969e-03 -9.6703e-01 3.6569e+00 -9.7764e-01 1.7732e+00 -1.9399e-03 -1.9399e-03 -2.2168e-03 -2.2168e-03 -2.2168e-03 1.0006e-02 4.3331e-05 0.0000e+00 7.7231e-03 4.1593e-04 -1.3127e-02 -1.3127e-02 1.1679e-02 -7.5695e-02 3.6569e+00 -5.9135e-02 -3.0813e-02 -2.9091e-03 -2.9091e-03 5.2749e-03 5.8309e-03 9.3098e-03 1.8943e-02 -1.7803e-02 -1.7803e-02 2.4969e-03 -9.6703e-01 -9.6703e-01 -1.3858e-03 1.2934e-02 -1.0070e+00 -4.7079e-03 -4.7079e-03 -4.7079e-03 -6.0904e-03 -1.9399e-03 -1.9399e-03 3.0522e-03 -2.2168e-03 -9.5855e-01 -9.8688e-01 1.0006e-02 4.3331e-05 4.3331e-05 0.0000e+00 1.0285e-02 1.0285e-02 -2.4251e-02 -1.0347e+00 -1.3127e-02 1.1679e-02 3.7465e-03 -5.1856e-02 -5.9135e-02 -1.6429e-02 -1.1335e-02 -1.6154e-02 -1.6154e-02 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.062 -0.966 0.000 0.000 1.815 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.967 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.062 -0.966 0.000 0.000 1.815 0.000 3.657 3.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.967 0.000 0.000 3.657 3.657 0.000 0.000 0.000 0.000 8.60008945 NA 8.20674675 10.62983662 10.79131057 7.34763908 11.29209710 6.51724104 9.77772529 -0.02929357 11.70988035 10.48100725 3.29266397 3.72562120 2.29266397 7.59644174 3.29266397 8.99725599 11.31724640 10.10001561 9.45354063 4.43016482 7.60008908 10.44342349 5.18018765 2.29266397 NA NA 9.40536083 8.00690613 6.85337568 8.58360107 6.38012335 11.61994391 9.80045538 2.29266397 9.64845232 NA 4.92493124 12.86014155 10.36519538 6.86555018 NA 7.24219567 7.99032354 NA 3.77808239 1.55571801 1.97074324 6.87196190 0.97070643 9.88511781 NA 4.18018765 10.23576164 9.57991137 2.77808239 10.00071004 12.08398648 6.75863497 2.55569347 2.67118013 10.93687758 2.29266397 -1.02914635 -1.02914635 NA 13.727212 11.177137 9.046212 13.821017 9.824042 10.811117 13.371412 12.729997 9.443423 9.957847 11.936517 10.879876 7.752092 8.272229 1.778082 7.026015 10.549577 10.783712 11.906082 6.691831 13.876157 9.187479 3.725621 10.259599 8.486432 10.469976 5.380123 5.525320 11.371078 7.417816 0.555718 11.043870 5.970732 6.901707 10.285316 9.842638 10.163642 10.745083 8.820920 10.648012 4.725621 11.308954 10.096146 10.419881 10.095500 9.417816 8.523402 9.812297 10.651971 7.993100 NA 8.246904 4.643158 8.476544 5.058195 9.823262 5.100015 10.158289 9.395949 7.042195 13.886985 9.932182 9.668569 12.088051 9.948728 -1.029146 1.324062 10.072708 9.681539 9.645808 TCGA-S3-AA14 47 0 NA 529 breast stage i t1 n0 (i+) cm0 (i+) female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 1 1 2 2 3 3 4 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.4802924 10.2953504 12.0904538 9.6999994 8.4532933 8.5145969 10.8475973 9.3005166 10.1569409 13.8103359 11.1551595 10.2758102 3.1725195 16.1414816 3.8729666 9.8642659 5.1725235 8.6340018 10.5861504 12.7922839 -0.8275125 12.6955942 3.9798790 10.2003593 10.4983900 6.8163783 NA 8.4109270 9.6931411 4.1267169 8.8572710 7.4109270 1.7574927 4.7872339 9.9382229 9.9636852 9.8884844 11.3418211 10.3580173 11.3276568 2.1725195 11.4694386 15.0286804 9.1275474 9.9798693 11.5709989 11.0297258 4.7574874 6.3721947 9.1062130 11.7111963 -0.8275125 10.9444244 5.4393073 5.2810454 4.8163795 9.6401280 11.6616177 10.0958499 13.0224161 12.2934082 7.2599852 10.6965743 10.5756303 10.5134851 11.4151011 5.1725235 11.3703534 12.6192180 1.4944668 10.3171806 9.0398011 4.8522836 5.0054135 10.4711578 9.8598981 10.1150369 9.6492686 2.4944412 8.8431786 13.5797901 12.3850188 10.1383066 9.6763482 0.00756200 0.01034700 0.00000000 0.02587400 0.04917700 0.02579500 0.00283640 -0.68675000 -0.01182500 -0.01182500 -0.00436960 -0.00648640 0.00047771 0.00158730 0.00158730 0.00158730 -0.00132410 0.01550900 -0.71289000 -0.00049269 -0.02282000 -0.07101100 3.48440000 -0.07541900 -0.10756000 -0.10756000 -0.10756000 -0.03184400 -0.07368600 0.00756200 -0.66878000 0.00000000 -0.03783700 -0.65776000 0.03530400 0.03530400 0.00283640 -0.67026000 -0.69690000 -0.02843100 -0.72337000 -0.67422000 0.03431700 0.00072697 -0.68529000 -0.02432600 0.00047771 0.00047771 0.00158730 0.00158730 0.00158730 0.00158730 -0.00132410 -0.00016817 -0.00016817 -0.65711000 -0.00049269 -0.00049269 -0.02282000 -0.72310000 -0.07101100 -0.74085000 0.01537000 -0.10756000 -0.10756000 -0.03184400 0.01229900 -0.07994900 -0.07994900 0.000 0.000 0.000 0.000 0.000 0.000 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.609 0.000 0.000 -0.627 -0.627 0.000 0.000 -0.651 -0.651 0.000 0.000 -0.701 0.000 0.000 0.000 -0.137 -0.137 0.000 0.000 0.000 0.000 0.000 0.000 -0.657 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.108 -0.108 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.609 0.000 0.000 -0.627 -0.627 0.000 0.000 -0.651 -0.651 0.000 0.000 -0.701 0.000 0.000 0.000 -0.137 -0.137 7.8625202 1.4944668 5.6960856 11.2392843 11.4219322 7.9123032 11.9044778 9.1168684 8.4159344 0.7574500 11.4313828 11.3030093 5.3819755 5.4944508 4.6319540 7.8484796 6.0794122 9.4369651 11.4561895 10.1505178 9.4682913 3.3424410 7.8091469 10.6472424 6.5034394 5.8449480 NA NA 10.6728664 5.9798767 7.3424472 8.3043792 6.6563376 11.2309234 10.1346955 4.4944476 9.0824155 0.1724875 7.3273407 12.7819320 9.2560018 7.7155543 -0.8275125 3.5648415 8.3018053 2.1725195 5.1498040 10.9846997 3.6960829 6.0004688 3.2599805 10.5426649 0.1724875 7.9863034 10.9211346 9.6040200 3.2599805 9.6421642 11.5562267 8.3648153 2.3424410 3.6960829 10.4961401 3.0794122 NA NA 1.1725515 13.359758 5.172524 9.363582 16.141482 9.821779 10.831180 12.792284 12.593798 9.140498 10.746643 13.111918 10.209383 9.106213 9.810958 1.494467 7.443985 10.597214 11.4480649 12.5850922 6.7423782 14.1187429 8.8289473 5.8307345 9.0054123 7.7121466 10.6142268 6.9004430 7.7612367 11.1551595 6.0054135 5.4763039 10.8537608 5.5300739 7.0376370 11.6790779 10.1682895 10.7798527 8.9021432 8.9701838 11.6948587 6.3323929 12.0781482 9.8884844 9.8642659 10.4316772 10.5129289 10.3555374 9.9830941 10.9489554 9.4602347 -0.8275125 9.9618849 7.0236468 11.7111963 6.7798533 10.9444244 7.5212502 10.5366461 9.6401280 7.7461696 13.7485933 10.1440659 10.2513404 12.9822905 10.9946948 0.1724875 -0.8275125 10.4819988 10.5011973 9.8307339 TCGA-S3-AA15 51 0 NA 525 breast stage iib t2 n1a cm0 (i+) female 2013 NA yes infiltrating ductal carcinoma 2 black or african american not hispanic or latino NA NA 3 3 5 1 5 5 4 7 5 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.3578513 8.8221323 11.7651033 8.7927883 8.9969977 9.2279420 9.0089560 9.8240676 10.9503636 11.3931493 10.8818778 10.2682996 2.0883791 10.8201944 1.6029794 11.2209821 7.4708606 9.9814754 10.2117730 8.1939250 -0.7190437 9.8432781 6.8279295 9.8594933 9.1405703 5.8201943 0.8659980 10.6374876 10.7516945 2.4509605 8.2410374 7.2583154 NA 9.3185826 9.7322468 9.4534633 8.9727791 9.9840741 9.3336037 10.6057788 1.8659980 7.5571604 15.4121692 8.6648263 10.2154637 10.5670157 10.4212264 5.4307837 NA 9.5675934 11.4621879 -0.7190437 10.4892701 6.9883950 7.2810361 5.5478230 9.4904891 11.7049394 9.9961397 12.0407158 12.7751412 7.7768909 10.2468199 10.0531688 10.7020485 10.8231002 4.6029616 11.1300498 9.3908663 -0.7190437 10.6625786 8.9410315 4.1936850 7.5050374 10.0899998 9.7476220 10.2604609 9.0835519 3.6029675 7.6560751 13.0476681 13.2546433 9.9140309 10.4917070 0.0122520 0.0955650 0.0226400 0.0973090 -0.0652460 -0.0328060 0.0088074 0.0088074 0.0124310 0.0124310 0.0124310 0.0000000 0.0000000 0.0096430 0.0096430 0.0096430 -0.0024394 -0.0078714 -0.0635160 -0.0627110 0.1330800 -0.0174750 -0.0174750 -0.0174750 0.0085290 0.0085290 0.0085290 -0.0477480 0.0122520 0.0122520 -0.0518560 0.0226400 -0.0631140 -0.0636510 -0.0328060 -0.0328060 0.0088074 0.0088074 0.0088074 0.0329000 0.0159300 0.0124310 -0.0193980 -0.0193980 -0.0193980 -0.0761820 0.0000000 0.0000000 0.0096430 0.0096430 0.0202580 -0.0013777 -0.0024394 -0.0078714 -0.0078714 -0.0635160 -0.0652610 -0.0652610 -0.0318510 -0.0479830 -0.0174750 -0.0174750 -0.0631130 -0.0358790 0.0085290 -0.0477480 0.0171790 -0.0169250 -0.0169250 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7.6604138 NA 6.5571604 10.6988882 11.5990135 6.8969959 10.5978828 10.2518319 9.5053388 5.7239790 13.7603739 11.6734953 4.0883876 0.2810750 3.9814782 7.9710336 3.1879261 11.7394423 11.2760961 10.9280443 8.9481473 3.5289588 8.0721985 10.5425429 9.9552279 8.6776404 1.2810157 0.8659980 10.6909569 4.4103208 6.7486410 8.7177474 7.5939184 11.1461696 10.3206401 4.8957437 10.3457785 3.6733529 8.3144586 12.6937378 9.8489917 9.4038638 2.6029557 3.2810305 8.0558225 2.0883791 4.6733529 -0.7190437 7.3199548 5.2828364 7.5478223 11.3123923 3.6733529 8.9657843 10.7420034 10.0640339 7.3417314 11.3393657 12.5298527 10.0450779 5.6029646 5.3254296 9.8337048 NA -0.7190437 1.6029794 5.3254296 11.945927 7.984939 8.742515 10.820194 10.217674 10.823100 8.193925 11.166732 9.571054 10.144448 14.136634 11.686443 9.567593 8.438383 3.528959 7.629764 10.046736 11.274682 11.777889 4.235229 13.391843 8.110758 8.098019 9.255450 7.808512 9.629465 9.492924 8.955228 10.881878 11.257958 4.281038 10.022503 6.126525 9.029832 11.913804 10.961395 9.968411 8.077335 8.948147 9.530149 10.242485 12.303740 8.972779 10.172060 10.384979 9.831782 10.751695 10.139017 10.417386 8.709396 NA 10.100145 9.008292 11.462188 12.594911 10.489270 7.139017 10.999423 9.490489 7.430935 13.849348 10.112343 10.353168 12.608448 11.763087 9.148314 5.144972 9.115507 9.321325 9.574507 TCGA-S3-AA17 64 0 NA 424 breast stage iib t2 n1mi cm0 (i+) female 2013 NA yes infiltrating ductal carcinoma 0 black or african american not hispanic or latino NA NA 4 2 1 2 1 4 3 6 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.1284784 8.7460487 11.0708883 9.6558509 8.8621981 9.6910963 10.1228778 9.3005754 10.9836618 6.5956633 10.5654278 10.2199798 1.7947693 12.8211144 3.3797318 8.8648847 6.3946770 8.8621981 10.7791824 11.8764138 4.6021183 12.8443572 6.3416585 9.3847052 10.3862862 7.5124402 0.3797318 10.2397581 8.8418879 0.7947693 9.0673938 7.0939721 NA 6.2293918 10.0102969 9.9104579 8.6292349 10.8185183 9.8581590 11.3785518 1.7947693 11.4832328 15.1297006 8.2409788 10.6569944 10.3000792 10.8591699 4.3493511 4.2210264 9.0638906 10.8725810 -1.2052307 10.2402961 6.7547659 7.8473318 6.1610855 9.7727593 11.6051347 10.1908335 10.1929732 13.0676852 8.4313885 11.2233858 10.6573819 10.5662534 10.7659482 5.2377090 11.4313885 12.3952576 NA 10.1870813 8.7562137 4.4731180 7.9521110 10.1719744 10.2241707 11.2038896 9.5404382 1.7947693 7.6682078 12.8258620 12.1668127 10.0307782 9.3693574 0.4895800 1.0314000 0.0262330 0.0723960 -0.0673240 0.0114000 0.0111210 0.0160060 0.0855100 0.0855100 0.0855100 0.4737500 -0.0044312 0.7648500 0.2902400 0.3185100 0.0230050 0.0331270 -0.0149160 -0.1919900 -0.5013100 -0.5096400 0.0157270 0.0157270 -0.0182160 -0.0182160 -0.0182160 1.1416000 -0.5233000 -0.0055375 0.0311550 -0.5075300 -0.4871200 0.5102000 0.0114000 -0.5146000 -0.5184600 -0.5024500 0.0345360 0.5816600 -0.0114730 -0.5116600 -0.4759600 0.0000000 0.0000000 0.0000000 -0.0044312 -0.5197900 0.2559000 0.2902400 -0.5066000 -0.5066000 0.0230050 0.0331270 -0.5169200 -0.5075300 -0.1919900 -0.1919900 -0.5013100 -0.5033900 -0.5096400 0.0157270 0.5070700 -0.0182160 -0.0182160 0.5105400 -0.5206100 0.0228650 0.0375000 0.474 0.000 0.290 -0.216 0.000 0.000 0.000 -0.192 -0.501 0.000 0.000 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.485 0.465 1.043 -0.521 0.000 0.000 0.000 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 0.410 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 0.474 0.000 0.290 -0.216 0.000 0.000 0.000 -0.192 -0.501 0.000 0.000 -0.503 0.000 0.000 0.000 0.000 0.000 0.000 0.485 0.465 1.043 -0.521 0.000 0.000 0.000 0.000 0.000 -0.487 -0.487 0.000 0.000 0.000 0.000 0.410 0.000 -0.512 0.000 0.000 0.000 0.000 0.000 7.0939721 0.7947693 3.7489549 10.6823653 11.9796393 6.6567195 11.4875973 9.9153128 8.8708579 -1.2052307 12.0878044 10.7457899 5.5090085 3.0426969 4.1870789 7.7862860 4.3493511 11.4768806 11.8891715 11.1635431 9.3222409 1.3797318 7.7372784 10.3377957 8.6181311 0.3797318 0.7947693 NA 11.1045245 5.2541972 5.5226835 8.9671914 5.5496507 11.5705943 10.3956060 5.0615516 9.4891218 -1.2052307 6.6339673 12.7286389 10.0078681 7.3065165 NA 8.4969364 8.7989843 0.7947693 4.9646897 0.3797318 7.8581588 4.3797249 4.9445118 10.6433869 NA 6.9495816 10.6933652 9.3045389 7.4529751 11.2933638 14.2167958 9.2439125 6.3646197 5.0235836 12.3800786 0.3797318 NA -0.2052307 -0.2052307 12.407908 6.033170 8.286617 12.821114 10.435009 10.898707 11.876414 11.146807 9.396423 10.695253 13.089528 11.417502 9.063891 9.152316 2.701660 7.047429 12.506753 10.882227 12.858917 8.288619 13.660397 8.197776 7.957155 8.845973 9.036747 10.017686 9.459211 7.402095 10.565428 6.944511 5.286619 11.457877 5.318324 8.315442 9.887521 11.261605 10.365094 8.206275 8.978399 11.959671 9.007868 12.302312 8.629235 10.345030 10.768820 11.853263 10.140169 9.825431 10.894769 8.435009 4.438619 9.615190 7.415900 10.872581 10.161633 10.240296 4.522684 11.219788 9.772759 8.241847 13.908788 9.804592 9.602119 12.636820 10.538336 7.449400 4.467188 10.209977 9.515863 9.936871 TCGA-UL-AAZ6 73 0 NA 518 breast stage iia t2 n0 mx female 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 4 2 1 2 1 2 2 9 1 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.1489727 8.4031876 10.7877066 6.9971953 9.6794877 9.3064443 9.7726409 10.3463659 9.7264760 15.1637193 10.8389168 10.6664347 0.9971840 17.2314214 2.1347138 8.5866593 6.2751803 8.2432230 5.3334774 12.5564767 1.4826418 13.2799362 1.9971840 10.3145762 10.2149107 5.7413564 NA 9.1499871 10.9534262 0.2602666 9.8644740 6.8749396 2.8451889 2.5821465 9.0782792 9.9704621 8.8822814 9.6511150 8.8798384 10.1130192 7.2375092 11.8783092 13.4550891 7.3232656 10.1540368 9.7798659 10.1464343 6.0846575 8.0306180 7.5791492 8.9629796 NA 10.0734764 9.4938492 3.4826160 3.7627315 9.1150980 11.6314618 9.9196310 10.5799018 11.8957966 8.6864946 10.5787724 9.9261576 10.1919521 10.4259741 3.7196654 11.0503066 12.1349549 1.8451889 9.9531357 8.2621071 3.2602365 3.0675871 11.3256458 9.0931196 10.9276369 8.7877067 3.4301514 5.9231944 10.8074455 9.8288191 9.8363990 9.2095701 0.8689600 1.1410000 -0.5895800 -0.0059229 0.6168300 0.4480400 0.5612000 0.0000000 -0.6347900 -0.6347900 0.5774100 0.4724200 -0.0389570 -0.6071700 1.6011000 0.5865400 0.5331300 0.5768700 -0.6330900 0.5315500 0.4238800 -0.0136480 3.6569000 3.6569000 -0.0452000 2.9996000 1.0078000 2.6820000 -0.0486190 -0.6074600 -0.1625300 0.0252800 -0.0214810 -0.6331900 0.0285110 0.0285110 0.5352400 0.0000000 -0.0141990 0.5262900 -0.0161800 -1.2929000 -0.0280710 -0.0280710 -0.0280710 -0.0727800 -0.0616610 -0.0616610 -1.2506000 1.0830000 -0.6189000 -0.6377200 0.5331300 0.5452700 0.5272400 -0.5966000 -0.6196800 -0.6211000 -0.6278700 0.5069300 -0.6461000 -0.5904600 0.0323110 -0.0452000 -1.1815000 0.4636900 0.5022400 -0.6342200 -0.6421500 0.472 0.000 -0.544 0.000 0.533 0.533 -0.597 -0.557 0.000 0.507 0.507 -0.578 -0.578 0.000 0.000 0.000 0.000 0.000 0.869 0.464 0.464 0.502 -0.634 0.555 0.000 0.000 0.000 -0.610 -0.610 0.000 0.000 0.000 0.000 0.526 0.000 -0.690 0.583 0.000 0.000 0.000 0.000 0.472 0.000 -0.544 0.000 0.533 0.533 -0.597 -0.557 0.000 0.507 0.507 -0.578 -0.578 0.000 0.000 0.000 0.000 0.000 0.869 0.464 0.464 0.502 -0.634 0.555 0.000 0.000 0.000 -0.610 -0.610 0.000 0.000 0.000 0.000 0.526 0.000 -0.690 0.583 0.000 0.000 0.000 0.000 9.0128890 8.1830617 5.5332487 11.3116652 12.0280003 8.2927712 11.5324706 4.7389840 10.5137975 1.2602064 11.9060382 11.2362376 8.7100660 4.1346974 3.0675871 6.9040854 4.8847200 11.1487192 11.7354564 10.3600158 9.5355783 3.3757067 7.5113178 10.8109764 5.4434508 4.7196599 4.1015324 -1.3248164 8.8019715 4.5821585 5.2144240 8.4745488 5.3046242 11.4534326 9.5246722 -0.3248164 8.4368185 -0.3248164 6.0061836 11.6300087 10.1706225 7.4467566 -1.3248164 5.5081561 8.5985945 5.4826224 2.9972021 2.3757067 1.9971840 7.5062576 2.2602365 12.1930596 -0.3248164 9.6258230 11.2463087 9.9094859 7.2375092 8.8822814 13.5561420 7.3997812 3.6752627 3.1346974 11.2219205 5.5456317 1.9971840 0.2602666 0.6752740 13.230298 8.456627 8.805838 17.231421 9.290897 10.916059 12.556477 12.196745 9.435155 10.145926 12.093515 10.676675 7.579149 9.354747 3.675263 10.356066 11.272389 10.489048 12.203111 6.118210 13.574860 8.322725 7.443452 9.724435 7.752083 10.496272 7.058971 9.579149 10.838917 7.237509 NA 9.070801 8.585160 9.052000 8.676675 8.479398 9.969888 7.130594 9.115098 8.231773 3.675263 12.728485 8.882281 9.867560 10.526626 11.157823 8.723754 9.582909 10.255054 6.741356 4.134697 9.158367 6.195611 8.962980 4.997193 10.073476 3.845189 11.321826 9.115098 6.463170 13.174490 11.154795 10.509343 10.495047 11.250570 NA 3.919016 8.949063 8.471307 9.253640 TCGA-UU-A93S 63 1 116 NA breast stage iv t4d n3b m1 female 2013 NA no infiltrating ductal carcinoma NA black or african american not hispanic or latino NA NA 1 2 1 2 2 6 2 8 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.4669330 8.3178770 10.3389862 6.4401333 9.0170581 9.0665723 9.3063816 9.4371243 11.3191035 12.8579855 9.2162371 9.9287765 1.5332643 18.5381733 3.1182102 11.7665624 5.5993327 7.6573635 1.8551525 11.5183728 -0.4667357 10.4513602 1.5332643 10.3059776 10.4954155 6.0410370 2.9926778 10.6411003 11.3280643 NA 8.3534212 8.5275959 NA 2.7031672 9.4565698 9.3146020 8.9510950 10.1442672 9.0762742 9.9071950 1.5332643 8.6153913 13.6741520 6.1132379 8.6339049 9.1049949 9.8819706 5.8907944 1.5332643 8.2406015 11.2843680 NA 10.3755927 -0.4667357 3.9926778 2.9926778 10.2388747 11.7448265 9.3047319 9.4461317 11.8367378 9.1896672 10.1479523 9.4535952 10.1182049 9.5735321 2.1181936 11.8711430 6.3912230 NA 10.6625254 6.7811695 1.5368487 2.7031672 11.0039013 9.9201827 9.8255640 9.0150417 2.7031672 9.4595384 12.1502506 11.3993622 9.6867945 8.5019092 1.4312000 1.3499000 -0.0128510 0.4472700 -0.0328600 0.8942700 0.0245480 -0.4495400 1.3193000 -0.8992400 0.8538300 1.7339000 0.0000000 -0.0335410 0.4099400 0.4099400 -0.4387500 -0.4482500 0.8603500 -0.4442600 0.0139110 0.6651200 3.6569000 -0.3743700 0.3399900 -0.4542600 -0.4504000 0.0465590 -0.4090400 -0.0070576 0.0286220 -0.0066672 0.5318600 -0.0283550 0.4439100 -0.0049844 0.0245480 -0.9553400 -0.5028500 1.3042000 -0.0127130 -0.9643000 -0.0947240 -0.0626290 -0.0626290 0.0331270 0.0000000 -0.4783900 -0.4515800 0.4747800 0.4099400 0.3805600 -0.4411300 0.0076392 -0.4241800 0.8270600 -0.4314800 -0.4803900 -0.4576800 0.0291840 -0.4148700 -0.3906300 -0.4573600 0.4735800 -0.4274600 0.0044411 -0.0797420 0.0969610 0.0609360 0.387 0.000 0.410 0.410 -0.424 -0.424 0.827 -0.480 0.000 0.000 0.000 -0.367 -0.367 -0.457 -0.457 -0.131 -0.410 0.000 0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.395 0.000 0.000 0.638 0.000 -0.450 -0.450 0.881 0.881 -0.899 0.380 0.000 0.000 0.000 0.000 0.387 0.000 0.410 0.410 -0.424 -0.424 0.827 -0.480 0.000 0.000 0.000 -0.367 -0.367 -0.457 -0.457 -0.131 -0.410 0.000 0.589 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.395 0.000 0.000 0.638 0.000 -0.450 -0.450 0.881 0.881 -0.899 0.380 0.000 0.000 0.000 0.000 9.4669330 7.1698669 7.7764166 10.8272887 12.1238294 8.4062250 11.7808733 7.3807381 8.5540834 NA 13.2787066 11.1572519 2.3405908 NA 2.5332394 7.1030979 1.5332643 11.1087816 11.3377768 10.8780931 9.8335949 4.6625245 9.7329148 11.0325900 5.7426961 6.2197435 2.3405908 NA 10.1424211 0.5332643 2.7031672 8.0330882 7.0330882 10.1716421 10.4772223 NA 9.8347385 NA 7.8995648 12.5265346 9.1734873 8.9039297 -0.4667357 7.2406015 9.2371459 3.4401283 2.7031672 NA 3.4401283 0.5332643 0.5332643 11.1976897 2.5332394 9.5611483 12.2513471 9.8495240 3.4401283 10.2423262 12.4748403 8.4128256 3.1182102 2.3405908 9.0089759 NA NA 1.5332643 5.6625245 11.0752537 8.2645613 8.8686328 18.5381733 10.4691441 12.5547429 11.5183728 9.1644195 9.2492045 8.8047054 12.9904950 9.8663977 8.2406015 10.1021485 -0.4667357 7.3146023 10.4005212 10.0868717 12.4524782 6.4757561 14.8375577 8.6521835 3.9255627 8.4610202 8.8023690 8.9945172 4.4401350 4.1182019 9.2162371 9.7704523 2.1181936 8.8438551 11.3649455 7.8633971 12.2537004 8.9039297 10.6404594 8.0008479 9.4874387 6.5885243 3.9255627 10.4690631 8.9510950 9.8035377 10.4874387 9.8347385 9.7341411 10.3405973 10.2872947 7.7279994 0.5332643 10.8918167 8.0130228 11.2843680 5.8370223 10.3755927 3.9255627 9.5830909 10.2388747 7.3976139 13.9316521 10.5176608 10.7218312 11.8017844 11.3830384 2.1181936 NA 9.5360574 9.0992965 8.9906234 TCGA-V7-A7HQ 75 0 NA 2033 breast stage iiia t1c n2a m0 female 2009 NA yes infiltrating ductal carcinoma 5 black or african american not hispanic or latino NA NA 1 1 NA NA 4 1 3 4 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.39337887 7.64934960 10.16944415 4.65817149 9.43761268 7.36671038 9.28930631 8.30062162 10.64380732 13.10606321 10.98580843 9.37610086 3.20751808 13.09086828 1.88557436 11.78871279 7.91164665 7.47054663 8.85521048 11.69508432 -0.07643243 14.10045972 6.54854914 11.30092798 9.86572368 4.05550804 0.30065091 10.18173555 9.80742512 0.30065091 8.73316348 4.91532968 NA 2.47053687 7.79647641 8.62029388 9.09990321 9.02172067 8.01829812 9.15548994 12.78846164 12.03638914 13.34629596 3.38893343 9.62367632 10.34159621 8.93905758 4.79247537 7.15237105 6.04208834 9.49783827 -0.69946623 10.29143469 4.97304639 2.88557436 4.69294044 7.55800966 11.45733676 10.64713531 11.97547593 11.23504962 9.34638120 10.08689122 10.09503749 9.52703377 9.12080059 1.30059234 10.64990282 11.55032767 1.88557436 10.12717011 8.00106134 4.58602610 1.30059234 10.90887647 8.21948462 10.35047017 8.79647673 2.30062162 9.18173568 12.90157983 12.10212791 9.64047163 9.81138577 0.0000000 0.0000000 -0.1074900 -0.1777400 0.0096710 0.0091705 -0.0065050 -0.0761450 -0.6969400 1.4181000 1.4181000 0.0441480 0.0176840 0.0154470 0.0154470 0.0154470 0.0294660 0.0294660 -0.5813700 -0.0565770 0.0034687 0.0465590 0.0465590 0.0454240 -0.2446000 -0.2453300 -0.0957800 0.0360880 0.0237060 0.0000000 -0.0060904 -0.1074900 0.0096710 0.0139110 0.0011064 -0.0118870 -0.0065050 -0.0761450 -0.0362650 0.0625080 0.0237060 -0.7116700 -0.0254560 -0.0254560 -0.0254560 -0.0184900 0.0176840 0.0176840 0.0154470 0.0154470 0.0154470 0.0154470 0.0294660 0.0294660 0.0294660 -0.5813700 -0.0565770 -0.0565770 -0.0023198 -0.7186700 0.0465590 0.0465590 0.0327040 -0.2446000 -0.0957800 0.0354850 -0.0011087 -0.3404400 -0.7171100 0.000 0.000 0.000 0.000 0.000 0.000 -0.574 0.000 0.000 1.224 0.547 0.000 0.000 0.000 0.000 -0.245 -0.245 0.000 0.000 0.000 0.000 0.000 -0.673 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 0.699 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.574 0.000 0.000 1.224 0.547 0.000 0.000 0.000 0.000 -0.245 -0.245 0.000 0.000 0.000 0.000 0.000 -0.673 0.000 0.000 -0.107 -0.107 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.712 0.699 0.000 0.000 0.000 0.000 9.5437955 NA 7.5246232 11.7974754 11.8460688 9.5145764 11.0225753 3.3353689 10.0361776 2.4705369 12.1533462 11.7121326 3.3880793 2.7600506 1.3005923 6.8704769 4.3880862 10.3794396 11.3619928 8.2635176 10.1901255 1.3005923 7.5952426 10.6810827 5.8704782 6.7435648 2.8855744 NA 8.6864841 6.0010613 5.9588334 8.2135111 9.7924747 11.7157692 8.9372461 0.8855744 9.9263304 NA 5.4705466 11.7171553 8.5837101 8.5697482 -0.6994662 2.8855744 7.5580097 3.1079724 5.9153321 2.4705369 3.1079724 7.5390262 0.8855744 11.0575949 3.0010636 6.5485491 10.9462800 9.6089606 4.2548208 8.8930785 10.5685787 7.3774370 1.3005923 4.3006216 12.0414564 3.4705499 NA -0.6994662 2.6225556 14.072505 6.207512 8.500294 13.090868 9.402597 11.060094 11.695084 10.308350 8.715497 9.587179 12.071492 9.827121 6.042088 9.971278 3.001064 7.195439 8.818291 9.7394134 12.3913957 4.5100758 12.7367931 8.1771384 3.1079724 8.8685778 7.4655289 9.1883144 6.4904466 8.9098004 10.9858084 7.8742689 2.3006216 8.6734868 8.0950372 6.1630740 8.7331635 9.9756965 9.3188218 8.8397804 11.7329025 5.4904450 4.0010636 11.7758104 9.0999032 10.5179735 10.8094068 10.2764696 9.5709169 9.4324786 10.1640335 6.1335122 NA 9.9664371 6.2548170 9.4978383 5.3880827 10.2914347 6.0819808 10.0122886 7.5580097 7.5342414 14.2827685 10.9601716 9.3960186 11.8412340 10.4260351 0.3006509 2.7600506 10.2007336 8.2548179 8.4324784 TCGA-W8-A86G 66 0 NA 347 breast stage iia t2a n0 (i-) mx female 2013 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 5 5 5 3 3 3 6 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.79286056 8.72409121 11.27850789 7.22859073 8.68136598 9.17036250 10.77265001 9.54319523 11.27409093 11.49276576 11.13334890 9.82567657 4.38424326 13.27609404 2.38424326 10.51492882 7.69959674 9.42465550 10.07201466 12.53733267 3.78278596 13.50347721 7.36775283 9.79290691 10.75849041 5.44837239 NA 7.38526536 7.73216471 3.38424326 9.60340974 7.21021156 -0.07521599 4.01227367 9.59811877 9.54502952 9.19510493 11.48275195 10.07646049 11.01094589 4.44837239 12.03708627 14.64982972 8.08581553 10.18866574 9.87682280 10.53075209 5.13426202 4.38424326 8.03594551 11.91668578 NA 10.37344224 3.96920576 5.89059504 3.56866451 9.67384100 12.09473470 10.62568282 12.87500103 12.77528957 8.62351428 10.59236481 10.47218626 10.85702443 10.71637956 3.83170500 11.87116773 11.79786924 2.38424326 10.31980826 8.69464762 5.17747535 2.38424326 9.96509942 10.31390326 10.19452086 9.08215649 4.44837239 9.64590895 12.78288783 13.14903752 10.07074177 9.89563466 0.90030000 0.45462000 0.00027728 -0.00802440 -0.01119800 0.26012000 -0.01050800 -0.01050800 0.27206000 0.27206000 0.26498000 0.00652620 -0.00346270 -0.00774820 -0.00774820 -0.00774820 0.01950300 0.01950300 -0.01615400 -0.00691950 0.47838000 0.01014600 0.00513590 0.00513590 0.28010000 0.28010000 0.28010000 0.28074000 0.00968320 -0.00470790 -0.00526100 -0.00802440 -0.01119800 -0.01119800 0.26012000 0.26012000 -0.01050800 -0.01050800 -0.01050800 0.24840000 0.24840000 0.27206000 -0.00249380 -0.00249380 -0.00249380 0.00305220 -0.00346270 0.00763920 -0.00774820 -0.00774820 -0.00774820 -0.00650500 0.01950300 -0.47681000 -0.49152000 -0.01615400 0.00346170 0.00402430 -0.48165000 -0.48197000 -0.48092000 0.00513590 0.00166420 0.28010000 0.28010000 0.27584000 0.24093000 -0.01147300 -0.02466100 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.482 -0.482 -0.481 0.000 0.000 0.000 0.280 0.280 0.000 0.891 0.281 0.281 0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.260 0.260 0.000 0.000 0.248 0.248 0.272 0.272 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.482 -0.482 -0.481 0.000 0.000 0.000 0.280 0.280 0.000 0.891 0.281 0.281 0.241 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.260 0.260 0.000 0.000 0.248 0.248 0.272 0.272 0.000 0.000 0.000 0.000 8.69299413 5.90209047 6.95271562 11.68324111 11.04893099 9.17714393 11.78201316 8.04478807 9.27243104 -1.07521599 12.29740272 11.21651283 4.31713038 3.24674250 5.56866451 7.95823253 3.44837239 9.81583381 11.17806624 10.70370817 9.34055137 4.24673490 8.38628932 10.51960077 6.04375132 6.53213926 0.92478401 NA 10.82416663 5.93603718 6.80745282 7.06436123 9.37395831 12.25705607 10.41114190 4.28235825 9.04375077 -1.07521599 8.44641009 13.01773196 11.13273915 8.26465981 NA 5.93603718 8.42863528 -0.07521599 4.65272740 0.92478401 1.50979717 6.08639528 2.62524711 9.94925681 4.44837239 9.78667199 10.70411866 9.47651799 4.92480775 10.32888683 10.74857495 6.35107527 2.50977184 2.73216064 11.05955686 0.50974651 -0.07521599 0.50974651 1.73218235 12.473577 4.807453 8.450330 13.276094 10.314441 10.192182 12.537333 12.595355 9.042076 9.535834 12.492409 10.195689 8.035946 8.642486 1.509797 7.855547 10.499403 10.8555470 12.1388252 5.5097718 13.7400874 9.0002888 5.4946652 8.3594377 7.0897164 10.0482004 6.1047183 6.0540931 11.1333489 8.2624317 5.2285917 10.5967930 9.8533281 6.1322149 10.9496031 10.5677639 10.2461741 8.3214145 9.6278481 9.5596207 4.0122737 12.2788372 9.1951049 10.3288868 10.4439545 11.3508123 10.2222992 9.5722682 10.3563073 7.8819117 NA 9.6611186 5.9197286 11.9166858 5.6796968 10.3734422 6.1342641 11.5839426 9.6738410 6.6459091 14.5013531 9.7990227 10.5367566 12.3954686 11.0362714 0.5097465 NA 9.8913151 9.2263060 10.5256518 TCGA-WT-AB41 NA 0 NA 1611 breast stage iib t2 n1mi mx female 2010 NA no infiltrating ductal carcinoma 1 black or african american not hispanic or latino NA NA 4 3 2 2 1 4 4 8 2 1 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 8.7422535 7.3298708 9.1868759 4.2424043 9.5763084 8.8595690 7.7969968 9.6058125 11.8438690 13.7722450 11.8653747 10.0303103 1.6574571 12.6775571 3.4647989 9.5792861 4.3013023 7.4388052 7.0668362 11.5142598 NA 14.2162247 0.6574571 10.5298508 9.2739942 6.0837091 -0.3426344 10.6080012 8.3819590 0.6574571 8.1691980 5.2721539 NA 4.1168804 7.9101108 9.0171948 8.2273007 9.2101144 8.4453476 9.3870661 3.1168804 11.2168224 13.5586893 -0.3426344 8.4123327 8.2758307 8.7554775 5.1168762 8.0368236 7.1492980 8.4022792 -0.3426344 10.0593914 5.7659696 5.8862648 4.4123344 8.5431417 11.7083142 9.6756454 10.5499881 11.8116305 9.4404436 10.3870660 10.5347294 9.3049037 9.1003888 1.2423891 11.6560357 11.7445766 NA 10.1790457 8.0017409 2.2424196 4.4123344 10.9771174 9.0962371 10.5658379 8.4871680 7.5091946 7.2721548 11.8103638 11.4855817 10.0006309 9.2831541 0.9387400 0.9387400 0.0104240 0.5114100 -0.0297210 0.5011600 0.0083351 0.0083351 3.6569000 3.3558000 -0.0029091 0.0141900 0.0141580 0.0059700 1.0434000 0.9872100 0.0182430 0.0040524 -0.0022168 -0.5142400 -0.5243000 -0.4994400 0.0227250 0.0206230 0.5012100 0.0058309 -0.4554400 0.0139980 -0.5033000 -0.4907800 -0.0017381 0.0062481 -0.4717300 -0.4510500 -0.5178400 -0.5178400 0.0083351 0.0083351 0.0083351 -0.0009059 0.0000000 -0.5298100 0.0090312 0.0090312 0.0090312 0.0090312 0.0141580 0.0141580 0.0059700 0.0059700 -0.5208200 -0.5208200 0.0182430 0.0090312 0.0090312 -0.0022168 -0.5210000 -0.5210000 0.9373200 0.0183830 -0.5184600 0.0227250 0.0033299 -0.5297100 -0.4554400 0.0428740 -0.0280810 0.0259520 0.0293250 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 -0.503 0.000 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 -0.503 0.925 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 -0.518 0.000 0.000 0.000 0.000 2.702 3.218 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.514 -0.503 0.000 0.000 -0.518 0.000 0.000 0.000 0.000 0.000 -0.503 0.925 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.518 -0.518 0.000 0.000 0.000 0.000 2.702 3.218 0.000 0.000 0.000 0.000 8.0583246 NA 4.9793715 11.6300661 12.0000755 8.6600633 10.8662892 3.6456786 11.3502177 3.8273719 12.6101865 12.1823371 2.6574342 -0.3426344 0.6574571 6.8571176 4.7449092 11.7995523 11.3522384 9.6867325 10.3656670 2.2424196 6.7554778 11.3704021 9.1352034 7.2424082 NA NA 8.8071923 3.2424043 5.4388052 7.7395943 7.7969968 12.1116366 10.6588534 2.8273719 9.2794971 NA 6.9520656 12.7758997 9.3870661 8.6602602 NA 2.4647989 8.7502025 4.1810071 4.7018373 -0.3426344 7.5763082 4.4647989 5.3298699 10.7666230 -0.3426344 6.0149979 11.0000756 10.0454625 6.9335691 10.3862161 12.5601972 8.8348648 4.7867270 6.0837091 13.0103163 1.6574571 NA 0.6574571 -0.3426344 14.8108334 5.9972947 7.8373542 12.6775571 10.5254961 11.2447540 11.5142598 9.8046502 9.7594209 9.9725949 12.7685809 10.7521828 7.1492980 9.6361557 -0.3426344 7.6461302 9.1652399 9.843559 11.209154 4.464799 12.894654 7.895850 7.576308 8.092074 7.392155 8.905942 8.623230 8.062587 11.865375 7.108656 1.979367 7.862016 9.540088 8.560152 7.956653 10.403120 9.279497 8.343946 10.586704 4.412334 7.771188 11.211780 8.227301 10.491126 10.524724 10.176098 8.677036 9.641864 10.248968 4.866898 1.657457 9.796139 6.133179 8.402279 8.898236 10.059391 4.242404 10.718816 8.543142 7.552263 14.111809 10.102460 9.171173 12.306926 10.108656 8.614547 3.744904 10.027043 8.223499 9.844797 TCGA-WT-AB44 NA 0 NA 883 breast stage ia t1c n0 (i-) mx female 2012 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 2 5 NA NA 2 2 6 9 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.6361979 7.8332665 9.5431869 4.1634182 8.9061071 8.9940021 9.4738210 10.1406947 10.3834632 9.2314602 10.5249599 10.5233640 2.0259147 13.1990887 3.7914494 11.0882273 7.5113384 8.7456424 9.6826936 12.5839493 NA 12.7337880 7.7861324 10.8832703 10.8435345 6.9231516 -0.2960134 12.0337795 9.2508777 0.7039866 9.4044229 6.0259103 NA 2.0259147 8.1427749 9.4588706 9.4250824 10.0538173 9.6435624 10.7741041 9.7429022 8.9847540 14.1356114 5.6130365 9.4096156 9.0031912 9.6726500 4.7483754 1.7039866 7.4113423 11.2528051 0.7039866 10.9719402 5.7263517 4.2275486 3.8739116 9.1918232 11.3768505 11.0162989 12.5231644 13.0891715 7.9986040 10.4259368 9.9530966 9.8255166 9.3278647 -0.2960134 10.9530966 11.9039622 -0.2960134 10.3693191 8.1797166 3.0259147 2.8739116 10.8925720 9.6983366 10.2547300 8.6376740 1.7039866 7.5368735 13.0509124 14.4259902 8.9328018 10.2898846 1.855500 1.855500 -0.085633 -0.085633 -0.384590 0.059080 0.014609 0.014609 -0.180550 -0.180550 -0.205060 0.033549 0.033549 0.024689 0.039902 0.039902 0.030029 0.012237 -0.079077 0.384030 -0.744290 -0.182950 -0.199540 -0.202730 -0.226990 -0.226990 -0.226990 -0.198620 -0.721720 -0.775180 -0.021265 -0.085633 -0.384590 -0.403960 0.000000 0.000000 0.014609 0.014609 0.014609 0.396290 0.380270 -0.180550 0.015308 0.015308 0.015308 0.062794 0.033549 0.079735 0.024689 0.039902 0.014888 0.014888 0.030029 0.012237 0.012237 -0.079077 0.384030 0.384030 -0.744290 -0.740980 -0.182950 -0.202730 -0.163450 -0.226990 -0.226990 -0.225250 0.049256 0.346210 -0.714970 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.384 -0.744 -0.205 -0.741 -0.183 -0.183 -0.146 -0.146 -0.227 -0.227 -0.769 1.087 -0.225 -0.225 0.000 -0.715 0.000 0.000 0.000 0.000 -0.412 -0.412 0.000 0.000 0.000 0.000 0.396 0.396 -0.181 -0.181 0.000 0.000 0.397 -0.378 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.384 -0.744 -0.205 -0.741 -0.183 -0.183 -0.146 -0.146 -0.227 -0.227 -0.769 1.087 -0.225 -0.225 0.000 -0.715 0.000 0.000 0.000 0.000 -0.412 -0.412 0.000 0.000 0.000 0.000 0.396 0.396 -0.181 -0.181 0.000 0.000 0.397 -0.378 8.6018287 2.0259147 6.6347210 11.4597053 10.6420925 8.9044161 11.2063178 4.0244704 9.3710947 NA 13.5342013 11.7580075 3.2889491 2.5113415 NA 7.4655346 2.7039866 11.0219610 11.6258241 11.4488170 9.9649027 8.3764085 7.5368735 10.7166077 5.8332671 6.3186928 2.8739116 0.7039866 10.6479631 6.9231516 7.0349002 7.3113133 7.7646792 11.0779359 10.5596303 0.7039866 7.9707697 NA 7.7861324 12.0040497 11.0416051 8.1260478 NA 1.7039866 7.8588010 3.4044263 6.7700718 NA 3.6108772 4.9134352 -0.2960134 10.1323433 NA 6.9423878 10.9940021 10.0855261 3.7039866 9.1469268 10.7193982 7.3764085 4.6108713 3.8739116 10.1888060 -0.2960134 NA 0.7039866 0.7039866 11.6586775 4.1634182 8.1386112 13.1990887 10.6486952 11.6972754 12.5839493 10.0337795 8.7781248 9.7053913 13.6425520 10.6876894 7.4113423 9.8888584 -0.2960134 7.4787704 10.0259112 11.097910 12.748890 3.951914 12.765521 8.442076 4.458868 8.731889 5.195836 9.289584 6.195836 4.748375 10.524960 8.652350 3.873912 11.579733 6.362195 4.051651 10.495146 11.427217 10.907331 7.883892 10.878285 4.458868 4.404420 12.906341 9.425082 11.411774 10.324203 10.932201 8.689825 8.908554 10.297374 5.163414 NA 10.129314 6.227545 11.252805 5.658180 10.971940 7.853731 10.860066 9.191823 7.404423 14.478616 9.363979 10.658907 12.733270 10.751789 1.703987 NA 9.250878 8.851188 10.135481 TCGA-XX-A899 46 0 NA 467 breast stage iiia t1c n2a mx female 2013 NA yes infiltrating lobular carcinoma 5 white not hispanic or latino NA NA 1 3 1 2 6 4 4 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 10.4389883 9.7057005 11.4621238 9.1914188 8.3608041 9.2429490 10.4548579 9.9131485 11.0858854 9.4544531 11.7424686 10.1565111 2.1146002 13.0640319 3.8646220 10.6930616 6.1629653 8.7077394 10.3138292 12.0015467 4.2097575 12.8396595 5.3830925 9.9511527 10.1708713 4.1146002 NA 11.2085440 10.2240777 4.7426368 8.8983456 7.4880618 -0.3448314 4.6093649 9.7863855 10.2326003 10.0149211 11.7262986 10.0421117 11.2813368 12.8848916 10.2240777 15.4145266 8.9994008 9.8219560 11.4831096 11.0359031 4.8250987 2.7426315 8.9827241 11.3438589 NA 10.9532341 6.2772242 7.3659777 5.5620623 10.5796129 11.7289784 10.3460425 12.9905619 12.9162380 8.0127234 10.7452839 10.6759778 10.7724899 11.2159820 5.2401349 11.4318101 12.1443923 -0.3448314 10.6484637 9.1258303 4.4137972 7.6940904 10.6705866 10.2527585 10.7309849 9.6523510 2.9770967 8.6079128 13.7309849 13.0695264 10.0835317 9.4183839 0.27537000 0.27537000 0.00110930 0.00110930 -0.00027724 0.35545000 0.00388540 0.00388540 2.21400000 2.79460000 0.29374000 0.00000000 0.00000000 -0.00180140 3.65690000 3.65690000 -0.00332430 0.50108000 -0.01161100 -0.19575000 0.01335300 0.00833510 0.00833510 0.00833510 -0.00027724 -0.00027724 -0.00027724 0.00249690 -0.07093700 -0.07093700 -0.08293400 0.00110930 -0.00027724 -0.00027724 0.05039200 0.13598000 0.00388540 0.00388540 0.00388540 -0.00166290 -0.00166290 -0.36102000 -0.06933200 -0.06933200 -0.06933200 -0.06933200 0.00000000 0.00000000 -0.00180140 -0.01656700 -0.36034000 -0.36034000 -0.00332430 0.00430210 0.00430210 -0.01161100 -0.19575000 -0.19575000 0.01335300 -0.34950000 0.00833510 0.00833510 -0.00857660 -0.00027724 -0.00027724 0.00249690 0.00485790 0.01530800 0.00845690 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.196 0.000 0.000 -0.350 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.275 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 0.152 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.196 0.000 0.000 -0.350 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.275 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.209 0.152 0.000 0.000 0.000 0.000 7.9428839 5.6885944 6.9860889 10.9538069 11.2295285 7.1698459 11.1969941 9.8691020 8.9498267 6.9125589 12.9310777 11.3362781 5.3133837 3.4100561 6.2174130 8.2772232 3.6551686 11.0986331 10.7821985 10.3784058 8.8767585 3.9030961 7.9266346 10.5907049 8.3728481 8.2513612 0.6551686 NA 11.3269337 6.8694902 7.0171157 8.1369711 10.1171624 11.0077999 10.4540483 5.8935758 9.2466938 -0.3448314 8.6367388 12.7992721 9.8443783 8.1748079 NA 4.4365283 8.3469152 NA 5.0814376 NA 7.2587978 5.1162400 5.6995655 10.6213165 -0.3448314 8.8682756 10.3847923 9.7279740 6.0730233 10.6452755 12.4699542 8.9849678 2.8250936 5.0814376 10.3788325 -0.3448314 NA 1.6551686 2.9030961 15.584861 5.327598 8.559054 13.064032 10.356478 10.503794 12.001547 11.569183 11.816710 10.619512 13.458294 11.952804 8.982724 8.245759 2.562059 7.143012 11.365117 11.314944 11.602808 6.396639 13.560743 8.863406 7.905470 8.972584 8.158997 10.095324 9.076184 8.554529 11.742469 7.571051 3.240131 10.503403 6.355612 7.685591 11.741639 10.713163 10.206399 8.840047 8.996134 11.591993 7.854844 11.366944 10.014921 10.171364 10.022586 11.416307 10.963226 10.360372 10.449587 8.367699 NA 9.683174 7.770891 11.343859 8.754519 10.953234 7.073024 11.074605 10.579613 7.110622 13.964293 9.952661 9.993351 13.020674 11.155266 6.972585 2.655169 10.280880 9.499877 9.904878 TCGA-XX-A89A 68 0 NA 488 breast stage iib t3 n0 mx female 2013 NA yes infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 4 3 NA NA 6 4 4 3 3 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.839820 9.534528 11.042423 8.993458 8.026503 9.329490 9.728550 9.981374 10.594377 9.238779 11.218617 10.311369 5.360923 11.594597 2.917985 10.526234 6.441540 9.092904 9.445456 11.988771 3.165912 12.679010 6.812796 9.628518 10.076588 4.472566 -1.081919 12.619827 10.916569 3.441537 8.984068 7.628785 -1.081919 5.221761 9.880875 9.826371 9.134725 10.336885 9.653535 11.150100 8.527158 9.010736 14.974214 8.262718 9.879428 10.648024 10.310833 5.127431 -1.081919 8.694412 12.431213 NA 10.986421 7.067726 6.962373 5.576190 10.045973 11.685336 10.380481 12.326574 12.593715 8.115196 10.474485 10.296566 10.959980 10.762684 4.561833 11.290028 10.338465 -1.081919 10.838332 8.786801 5.104240 7.016010 10.504818 9.454226 10.000793 9.344244 4.087904 8.399778 13.393649 12.969613 9.765819 9.629646 0.01223700 0.00430210 -0.25600000 -0.26528000 -0.00277070 0.00847430 -0.00041585 0.00000000 -0.53012000 0.01181800 0.00013863 0.01460900 0.01460900 0.01628600 3.65690000 -0.52960000 0.00926990 0.01056400 -0.53195000 -0.25176000 0.02721600 -0.51228000 -0.51228000 -0.51342000 1.56970000 0.06236500 0.06236500 0.03199900 -0.51146000 -0.25950000 -0.25415000 -0.25600000 -0.00277070 -0.00277070 0.00847430 0.00360760 -0.00041585 0.00000000 0.00000000 0.00597000 0.00666530 -0.53012000 0.01796300 0.01796300 0.01796300 0.01796300 0.01460900 0.01460900 0.01628600 0.06451100 -0.53022000 -0.53022000 0.00926990 0.00499690 0.02820000 -0.53195000 -0.25176000 -0.25176000 0.02721600 -0.51784000 -0.51228000 -0.51228000 -0.52645000 -0.49089000 0.06236500 0.03199900 0.01287400 -0.50391000 -0.50795000 0.000 0.000 -0.508 -0.508 0.000 0.000 -0.532 -0.252 0.000 0.000 -0.518 -0.512 -0.512 -0.526 -0.526 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 -0.249 -0.249 -0.265 -0.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.530 0.000 0.000 0.000 -0.144 -0.144 0.000 0.000 -0.508 -0.508 0.000 0.000 -0.532 -0.252 0.000 0.000 -0.518 -0.512 -0.512 -0.526 -0.526 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.508 -0.249 -0.249 -0.265 -0.265 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.530 0.000 0.000 0.000 -0.144 -0.144 7.9264075 NA 6.6861629 11.0910312 10.5943766 7.8027903 10.9783369 10.0493856 8.9705468 1.9179663 12.8517616 11.6660059 3.4415366 5.7123949 5.3442426 7.9151581 5.1659079 11.6571264 11.4624602 10.2628294 8.8021493 6.5761895 8.3124415 10.3316067 7.7123949 10.1527962 3.1659119 1.5029416 11.2804705 6.7759592 8.7712884 7.9375692 10.1647193 11.2452423 9.8472372 5.6459005 8.9500245 NA 8.3167223 12.0830427 9.2722281 8.1151956 0.5029416 6.1847643 8.0651835 1.7253485 6.5326879 0.9180045 6.1659059 5.9858966 4.1659039 10.8772562 -1.0819191 9.3273696 10.6049169 9.8241177 5.7253349 10.6274934 12.1837403 10.0664553 2.6184266 4.2033813 10.8945428 2.0879041 -1.0819191 -1.0819191 3.3102965 13.600170 5.239906 8.694412 11.594597 10.120715 10.278826 11.988771 11.759543 11.126771 10.401794 13.369963 10.305996 8.694412 9.347386 3.239902 6.818845 10.647175 11.496116 12.377666 6.686163 13.644567 8.630506 7.682851 8.489731 7.635655 10.883186 8.401795 7.248895 11.218617 8.087904 2.618427 10.426764 6.472567 7.723142 11.152197 11.111812 10.653958 7.417825 8.830868 10.970547 6.502942 12.108009 9.134725 10.436632 9.289755 10.126823 10.401291 11.387875 10.526234 8.365062 NA 9.861651 8.277904 12.431213 7.547336 10.986421 8.031721 11.251676 10.045973 6.788713 13.909811 9.690293 10.076588 12.834418 10.938959 4.005445 -1.081919 11.420313 9.750078 9.806722 TCGA-Z7-A8R5 61 0 NA 3287 breast stage iiia t3 n1a mx female 2005 NA no infiltrating lobular carcinoma 3 white not hispanic or latino NA NA 1 3 2 2 3 3 4 3 2 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.1828673 8.2705915 10.4202209 4.8415354 9.3009654 8.6849313 8.8434111 9.4660246 12.1392143 12.0534220 10.1865693 10.0346484 0.8415706 13.0168753 2.7160032 12.7769443 7.5694539 8.9254562 8.7323045 11.5448605 0.8415706 12.3375552 7.0379313 10.7350173 9.9819374 5.2338497 0.2565276 9.7036545 9.4214781 -0.7434724 7.8377717 6.1634625 NA 3.6488911 8.9483147 9.0926216 9.4877924 10.6521053 9.1376851 9.8443488 9.5233577 9.9912808 14.3456906 4.6855197 10.1098808 9.2381384 9.7869776 3.4264929 6.6488882 7.2844771 12.6504979 0.2565276 11.0284733 5.3226601 6.1145523 5.4853914 9.2409897 11.9364911 10.7996030 12.2679732 12.0068595 8.9535388 10.6212531 10.5251132 10.0255825 9.6185149 2.0639171 11.1365373 10.7791528 -0.7434724 10.3546032 8.2309859 3.5256054 3.1634665 11.3413796 9.1858296 9.8931958 8.5233577 4.5044996 10.0189532 13.1832378 13.3286200 9.3819848 9.9004274 0.48551000 0.49639000 -0.15848000 -0.15848000 0.13773000 0.14667000 0.15278000 0.13717000 0.08493200 0.08493200 0.08493200 -0.00415460 -0.00415460 -0.15631000 -0.15631000 -0.15631000 0.14995000 0.13939000 -0.16294000 -0.00083160 -0.15042000 0.00889200 0.00889200 0.00889200 0.00861350 0.00861350 0.00861350 0.01126100 -0.15324000 -0.15324000 0.00569190 -0.15848000 0.18404000 0.13773000 0.14667000 0.14667000 0.15278000 -0.17322000 0.14741000 -0.00802440 -0.00802440 0.08493200 0.00000000 0.00000000 0.00000000 0.00000000 -0.00415460 -0.00415460 -0.15631000 -0.15631000 -0.15631000 -0.15631000 0.14995000 0.13939000 0.13939000 -0.16294000 -0.00083160 -0.00083160 -0.15042000 -0.18282000 0.00889200 0.00889200 0.00499690 0.00861350 0.00861350 0.01126100 0.00083195 -0.14798000 -0.14798000 0.000 0.000 -0.156 -0.156 0.139 0.139 -0.163 0.000 -0.150 0.308 -0.183 0.000 0.000 0.000 0.000 0.000 0.000 -0.153 0.332 0.000 0.000 0.000 -0.148 0.000 0.000 -0.158 -0.158 0.138 0.138 0.147 0.147 0.124 0.124 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 -0.156 -0.156 0.139 0.139 -0.163 0.000 -0.150 0.308 -0.183 0.000 0.000 0.000 0.000 0.000 0.000 -0.153 0.332 0.000 0.000 0.000 -0.148 0.000 0.000 -0.158 -0.158 0.138 0.138 0.147 0.147 0.124 0.124 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 9.1932092 4.5784980 5.9004273 11.3977204 11.7623827 8.2023369 10.9294385 6.5323232 9.7737977 2.8415304 13.4713457 11.6748877 2.2565578 2.2565578 -0.7434724 8.1604528 3.4264929 10.5632026 10.8325831 9.6922415 9.6617127 3.1634665 8.2537506 11.1513890 7.5739842 8.1361545 2.0639171 1.5785040 10.4044121 4.8712818 7.5373419 7.4364800 9.0655354 10.8244608 9.6185149 -0.7434724 9.2252381 NA 7.4463960 13.5925198 9.2295509 9.2705918 2.2565578 1.5785040 8.4113894 -0.7434724 5.6141238 0.2565276 5.8111602 5.2789400 4.9570091 10.9789519 2.7160032 9.8786230 11.1395962 9.9887386 6.1873085 9.8508958 10.6445885 8.9094161 3.4264929 5.1145503 10.8918359 -0.7434724 -0.7434724 NA 2.5785040 10.9091518 5.4853914 8.7057198 13.0168753 10.2817108 10.8518287 11.5448605 10.4082220 9.0526107 9.7693117 12.8947808 10.8415337 7.2844771 9.3226603 0.8415706 7.5830008 9.5534874 10.6190630 11.8770202 5.1634625 13.7485464 8.6870236 7.2899940 8.7444114 6.4660251 9.0983872 7.2677989 7.3703134 10.1865693 7.6617126 0.8415706 10.3091392 8.7118985 6.4258956 10.5092366 10.2830946 10.2020151 8.0799386 10.3967619 4.3440331 5.9289956 11.4436139 9.4877924 10.7221376 9.9103120 10.4550162 10.0436576 9.5739838 10.0558529 6.0767493 NA 10.0608555 6.7241768 12.6504979 7.6659619 11.0284733 5.5419732 11.3463527 9.2409897 7.3064199 15.1873778 10.4069532 10.2899942 12.6874157 10.6483518 6.7879522 0.2565276 9.1129967 8.8731202 9.1453144 TCGA-Z7-A8R6 46 0 NA 3256 breast stage i t1c n0 m0 female 2005 NA no infiltrating lobular carcinoma 0 white not hispanic or latino NA NA 1 1 1 2 1 1 6 5 1 2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 9.38695856 9.27715649 11.67888306 8.07883609 8.30202425 9.32568840 10.47389201 9.33815228 9.56519121 9.00356457 11.65183509 10.41370334 4.83461515 12.31607233 0.79900439 8.91169368 6.12092212 8.08254506 8.69986044 12.97678678 1.93651545 14.19482218 6.52145911 9.76015373 11.37623351 5.44285063 1.06205262 9.57896229 11.08993392 0.06198352 6.35358266 5.49943454 NA 3.43126191 9.03548618 10.32764302 9.20243168 11.51889570 9.15478521 10.35856187 3.93649661 11.17728841 15.07979330 9.18911959 10.29204837 10.19345624 10.09774352 3.47706852 NA 8.59730322 11.35989953 -1.52284079 8.52963357 6.44284897 4.78084550 5.48829327 9.57378066 12.08543578 10.90464019 11.85468270 12.53514175 7.95279890 10.74385195 10.02160007 10.65417352 10.85183327 3.64699208 12.20456051 12.50298360 1.47705557 10.37415453 9.32333944 3.56749677 3.33504013 10.56585370 9.71248143 9.79899354 9.51255184 3.43126191 9.42397182 13.25339566 11.97029546 10.10459928 9.90333026 0.6693400 0.6614300 -0.0109220 -0.0176660 -0.0567120 0.5260800 -0.0139530 -0.0139530 -0.8157300 -0.8157300 1.3711000 0.6786400 0.0000000 0.6649300 3.6569000 -0.8151500 -0.0044312 -0.0044312 -0.0691980 0.8202000 -0.0559030 0.0272160 0.0307320 0.0360880 -0.0603450 -0.0603450 -0.0603450 0.6690000 -0.0663860 -0.0663860 0.0018030 -0.0109220 -0.0567120 -0.0642400 0.5260800 0.5225800 -0.0139530 -0.0139530 -0.0139530 0.0183830 0.0131180 -0.8157300 -0.0472600 -0.0768120 0.6313400 0.6313400 -1.2875000 -0.0013858 0.6649300 1.3573000 -0.7984400 -0.8198300 -0.0044312 -0.0044312 -0.0044312 -0.0678600 0.8129800 0.8129800 -0.0716680 -0.8200400 -0.7680900 0.0307320 -0.0221950 -0.0603450 -0.0603450 0.6690000 -0.0532060 -0.0685290 -0.0685290 0.000 0.000 -0.134 -0.798 0.000 0.000 0.000 0.813 0.000 1.393 -0.799 -0.768 0.000 0.000 0.000 0.000 0.000 0.669 0.669 0.669 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.526 0.526 0.000 0.000 0.000 0.000 -0.816 0.419 0.000 0.631 0.106 0.106 0.000 0.000 -0.134 -0.798 0.000 0.000 0.000 0.813 0.000 1.393 -0.799 -0.768 0.000 0.000 0.000 0.000 0.000 0.669 0.669 0.669 0.669 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.526 0.526 0.000 0.000 0.000 0.000 -0.816 0.419 0.000 0.631 0.106 0.106 8.50911109 0.06198352 5.82579326 11.24131502 11.68438488 7.61587457 11.62506528 7.19501583 9.15970890 1.64699208 11.81371146 11.30786979 4.23195458 2.06201807 1.79900439 7.69865258 3.47706852 10.20626129 10.38958058 10.84529904 9.50773261 0.47705557 8.13349006 9.99029957 5.88645748 3.86938780 3.38395307 NA 10.68346935 6.18442511 5.00062653 7.68163690 6.60634895 10.84213565 10.07139009 1.28439568 9.83021222 -1.52284079 5.85210374 12.41130916 8.47424499 7.27796523 NA -0.52284079 7.95482386 1.93651545 1.93651545 -1.52284079 3.72498853 4.74722088 2.17750326 11.18312973 1.28439568 6.25842470 10.33543502 9.69562868 5.86938286 9.81357199 12.15962118 7.44284980 3.52146539 3.72498853 10.62966717 3.00063104 NA 2.28442529 0.47705557 15.945641 5.686520 8.228609 12.316072 9.927761 10.502551 12.976787 11.984612 8.347430 9.988324 12.786115 11.428532 8.597303 9.338928 5.499435 7.277965 10.394438 11.62204225 12.89445649 7.44573250 13.37448126 8.61533721 4.43126191 9.18787189 9.22021676 11.44060458 5.84338846 7.98485989 11.65183509 7.30361364 0.06198352 10.58100884 6.52691389 8.37103431 9.29564773 10.01136830 10.61821461 9.96691333 10.20838447 9.52145950 4.40780140 12.68355253 9.20243168 11.14926978 11.47194920 10.34318527 9.46148395 10.84037889 10.61181262 7.93239253 NA 8.48329341 7.63900347 11.35989953 3.86938780 8.52963357 6.12811809 10.87072404 9.57378066 7.45434536 13.75845218 10.76621980 9.39294482 12.49856600 11.51821118 2.28442529 NA 9.97391917 10.10551099 9.56452831 TCGA-BH-A0B2 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 2 5 6 2 NA NA 5 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.6592300 0.7013900 -0.0347680 0.0000000 -0.0989450 -0.0038779 0.0072443 0.0039346 1.6657000 1.6657000 1.7989000 0.0241270 0.0241270 0.0106510 0.0106510 0.0106510 -0.1586000 -0.1586000 0.0308730 0.0290440 -0.1085400 0.4854400 0.0244080 0.0244080 0.0754150 0.0754150 0.0754150 0.0150280 -0.4312700 -0.3779700 -0.2955600 -0.0227480 -0.0989450 -0.0575200 -0.0038779 -0.0038779 0.0394780 0.0072443 -0.4857500 -0.4588600 -0.4793400 -0.4815500 -0.0388500 -0.0388500 -0.0388500 -0.0388500 0.0241270 0.0241270 0.0276380 0.0106510 0.0106510 0.0106510 -0.1586000 -0.1586000 -0.1586000 0.0019418 0.0290440 0.0290440 -0.1085400 -0.4787300 -0.4455500 0.0244080 0.0256710 0.0754150 0.0754150 2.0050000 -0.0306770 -0.0353120 -0.0469720 0.000 0.000 0.000 0.000 -0.159 -0.159 0.000 0.000 -0.109 0.000 -0.477 -0.433 0.000 0.000 0.000 0.000 0.000 -0.378 0.281 1.990 0.000 0.000 0.000 -0.132 -0.296 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 0.000 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