This pipeline computes the correlation between significant copy number variation (cnv focal) genes and selected clinical features.
Testing the association between copy number variation 66 focal events and 13 clinical features across 449 patients, 272 significant findings detected with Q value < 0.25.
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amp_2q33.1 cnv correlated to 'PATHOLOGY_N_STAGE', 'RESIDUAL_TUMOR', and 'NUMBER_OF_LYMPH_NODES'.
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amp_5p13.2 cnv correlated to 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', and 'NUMBER_OF_LYMPH_NODES'.
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amp_6p21.1 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', and 'NUMBER_OF_LYMPH_NODES'.
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amp_8q24.21 cnv correlated to 'YEARS_TO_BIRTH', 'PATHOLOGIC_STAGE', 'PATHOLOGY_M_STAGE', and 'HISTOLOGICAL_TYPE'.
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amp_11p15.5 cnv correlated to 'YEARS_TO_BIRTH', 'PATHOLOGY_N_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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amp_13q12.13 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', 'RESIDUAL_TUMOR', and 'NUMBER_OF_LYMPH_NODES'.
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amp_13q22.1 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', 'RESIDUAL_TUMOR', and 'NUMBER_OF_LYMPH_NODES'.
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amp_16p11.2 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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amp_16q12.1 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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amp_17q12 cnv correlated to 'PATHOLOGY_T_STAGE', 'PATHOLOGY_M_STAGE', and 'ETHNICITY'.
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amp_17q24.1 cnv correlated to 'Time to Death', 'HISTOLOGICAL_TYPE', and 'ETHNICITY'.
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amp_20p12.1 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_M_STAGE', 'RADIATION_THERAPY', and 'HISTOLOGICAL_TYPE'.
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amp_20p11.23 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', 'RESIDUAL_TUMOR', and 'NUMBER_OF_LYMPH_NODES'.
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amp_20p11.21 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'RESIDUAL_TUMOR'.
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amp_20q11.21 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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amp_20q12 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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amp_20q13.12 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_1p36.11 cnv correlated to 'Time to Death', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_1p33 cnv correlated to 'Time to Death', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_1p13.1 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_2q22.1 cnv correlated to 'NUMBER_OF_LYMPH_NODES' and 'RACE'.
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del_3p26.1 cnv correlated to 'Time to Death', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_3p14.2 cnv correlated to 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', and 'NUMBER_OF_LYMPH_NODES'.
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del_4p16.2 cnv correlated to 'Time to Death', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', 'RESIDUAL_TUMOR', 'NUMBER_OF_LYMPH_NODES', and 'ETHNICITY'.
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del_4q22.1 cnv correlated to 'Time to Death', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_4q35.1 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_5q12.1 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', 'NUMBER_OF_LYMPH_NODES', and 'ETHNICITY'.
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del_5q21.1 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'NUMBER_OF_LYMPH_NODES', and 'ETHNICITY'.
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del_5q22.2 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', and 'NUMBER_OF_LYMPH_NODES'.
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del_6p25.3 cnv correlated to 'YEARS_TO_BIRTH', 'GENDER', and 'RACE'.
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del_6q26 cnv correlated to 'Time to Death', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'NUMBER_OF_LYMPH_NODES', and 'RACE'.
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del_7q31.1 cnv correlated to 'ETHNICITY'.
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del_8p23.2 cnv correlated to 'YEARS_TO_BIRTH', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'GENDER', 'HISTOLOGICAL_TYPE', 'RESIDUAL_TUMOR', and 'NUMBER_OF_LYMPH_NODES'.
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del_8p22 cnv correlated to 'Time to Death', 'YEARS_TO_BIRTH', 'PATHOLOGIC_STAGE', 'PATHOLOGY_T_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'GENDER', 'HISTOLOGICAL_TYPE', 'RESIDUAL_TUMOR', and 'NUMBER_OF_LYMPH_NODES'.
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del_8q11.1 cnv correlated to 'RACE'.
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del_9p21.3 cnv correlated to 'YEARS_TO_BIRTH' and 'HISTOLOGICAL_TYPE'.
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del_10p15.3 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', and 'NUMBER_OF_LYMPH_NODES'.
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del_10q21.1 cnv correlated to 'YEARS_TO_BIRTH', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', 'NUMBER_OF_LYMPH_NODES', and 'ETHNICITY'.
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del_10q23.31 cnv correlated to 'YEARS_TO_BIRTH', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_10q25.2 cnv correlated to 'YEARS_TO_BIRTH', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', 'RESIDUAL_TUMOR', and 'NUMBER_OF_LYMPH_NODES'.
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del_12p13.2 cnv correlated to 'Time to Death', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_13q14.13 cnv correlated to 'PATHOLOGY_N_STAGE' and 'RACE'.
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del_14q31.1 cnv correlated to 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_15q11.2 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_15q15.2 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_15q21.1 cnv correlated to 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_15q22.33 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_16p13.3 cnv correlated to 'Time to Death', 'PATHOLOGIC_STAGE', and 'PATHOLOGY_T_STAGE'.
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del_16q23.1 cnv correlated to 'Time to Death'.
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del_17p12 cnv correlated to 'YEARS_TO_BIRTH', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_17q24.3 cnv correlated to 'Time to Death', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', and 'NUMBER_OF_LYMPH_NODES'.
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del_18p11.31 cnv correlated to 'YEARS_TO_BIRTH', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_18q12.2 cnv correlated to 'YEARS_TO_BIRTH', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_18q21.2 cnv correlated to 'YEARS_TO_BIRTH', 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'GENDER', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_18q22.1 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'GENDER', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_19p13.3 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'RESIDUAL_TUMOR', and 'NUMBER_OF_LYMPH_NODES'.
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del_20p12.1 cnv correlated to 'HISTOLOGICAL_TYPE'.
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del_21q11.2 cnv correlated to 'PATHOLOGY_N_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
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del_22q13.32 cnv correlated to 'PATHOLOGIC_STAGE', 'PATHOLOGY_N_STAGE', 'PATHOLOGY_M_STAGE', 'HISTOLOGICAL_TYPE', and 'NUMBER_OF_LYMPH_NODES'.
Clinical Features |
Time to Death |
YEARS TO BIRTH |
PATHOLOGIC STAGE |
PATHOLOGY T STAGE |
PATHOLOGY N STAGE |
PATHOLOGY M STAGE |
GENDER |
RADIATION THERAPY |
HISTOLOGICAL TYPE |
RESIDUAL TUMOR |
NUMBER OF LYMPH NODES |
RACE | ETHNICITY | ||
nCNV (%) | nWild-Type | logrank test | Wilcoxon-test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Wilcoxon-test | Fisher's exact test | Fisher's exact test | |
del 8p22 | 201 (45%) | 248 |
0.0489 (0.177) |
0.0262 (0.118) |
1e-05 (0.00039) |
0.0485 (0.177) |
1e-05 (0.00039) |
4.51e-06 (0.000258) |
0.0573 (0.196) |
0.52 (0.788) |
0.00142 (0.0151) |
0.0307 (0.131) |
3.44e-07 (2.55e-05) |
0.399 (0.683) |
0.35 (0.635) |
del 4p16 2 | 138 (31%) | 311 |
0.0307 (0.131) |
0.868 (0.993) |
0.00063 (0.00886) |
0.473 (0.752) |
0.0008 (0.0105) |
4.25e-05 (0.00135) |
0.413 (0.693) |
0.468 (0.751) |
0.0173 (0.0883) |
0.0791 (0.25) |
0.00035 (0.00661) |
0.344 (0.632) |
0.077 (0.246) |
del 8p23 2 | 188 (42%) | 261 |
0.205 (0.477) |
0.0708 (0.235) |
1e-05 (0.00039) |
0.0975 (0.289) |
1e-05 (0.00039) |
2.5e-05 (0.000856) |
0.0128 (0.0714) |
0.739 (0.906) |
0.00328 (0.0271) |
0.023 (0.109) |
4.13e-06 (0.000253) |
0.393 (0.681) |
0.319 (0.604) |
del 10q21 1 | 97 (22%) | 352 |
0.759 (0.912) |
0.0433 (0.167) |
0.00644 (0.0453) |
0.962 (1.00) |
0.0211 (0.102) |
0.00478 (0.0359) |
1 (1.00) |
0.222 (0.5) |
0.031 (0.131) |
0.138 (0.367) |
0.01 (0.0604) |
0.586 (0.843) |
0.0413 (0.161) |
del 10q25 2 | 108 (24%) | 341 |
0.252 (0.534) |
0.0582 (0.197) |
0.0662 (0.221) |
0.403 (0.685) |
0.0125 (0.0711) |
0.018 (0.0904) |
1 (1.00) |
0.696 (0.898) |
0.077 (0.246) |
0.0563 (0.194) |
0.00666 (0.0461) |
1 (1.00) |
0.266 (0.552) |
del 18q21 2 | 286 (64%) | 163 |
0.738 (0.906) |
0.0488 (0.177) |
8e-05 (0.00214) |
0.736 (0.906) |
0.00011 (0.0027) |
8.66e-05 (0.00218) |
0.0393 (0.156) |
1 (1.00) |
1.07e-10 (2.29e-08) |
0.159 (0.405) |
8.37e-05 (0.00218) |
0.805 (0.952) |
1 (1.00) |
amp 13q12 13 | 275 (61%) | 174 |
0.757 (0.911) |
0.597 (0.853) |
0.00061 (0.00872) |
0.98 (1.00) |
0.00137 (0.0149) |
0.00114 (0.0128) |
0.846 (0.98) |
1 (1.00) |
1.77e-07 (1.9e-05) |
0.0275 (0.122) |
0.0023 (0.0219) |
0.147 (0.385) |
1 (1.00) |
amp 13q22 1 | 277 (62%) | 172 |
0.708 (0.904) |
0.773 (0.924) |
0.00019 (0.00418) |
0.906 (1.00) |
0.00023 (0.00481) |
0.00306 (0.0267) |
0.331 (0.616) |
1 (1.00) |
1.68e-07 (1.9e-05) |
0.0571 (0.196) |
0.0021 (0.0207) |
0.122 (0.346) |
1 (1.00) |
amp 20p11 23 | 219 (49%) | 230 |
0.297 (0.592) |
0.725 (0.904) |
0.00081 (0.0105) |
0.866 (0.993) |
0.052 (0.184) |
0.000326 (0.00636) |
0.298 (0.593) |
0.324 (0.609) |
0.0132 (0.0728) |
0.0159 (0.0836) |
0.0775 (0.246) |
0.396 (0.682) |
1 (1.00) |
del 1p36 11 | 167 (37%) | 282 |
0.0473 (0.175) |
0.0802 (0.251) |
0.00042 (0.00735) |
0.737 (0.906) |
0.0172 (0.0883) |
1.79e-05 (0.00064) |
0.118 (0.337) |
0.493 (0.769) |
0.000585 (0.00872) |
0.124 (0.348) |
0.00356 (0.0286) |
0.113 (0.327) |
0.631 (0.877) |
del 1p33 | 123 (27%) | 326 |
0.00283 (0.0258) |
0.946 (1.00) |
0.0232 (0.109) |
0.316 (0.603) |
0.0294 (0.128) |
0.00541 (0.0404) |
0.397 (0.683) |
1 (1.00) |
0.0138 (0.0748) |
0.236 (0.516) |
0.00833 (0.0541) |
0.309 (0.597) |
0.316 (0.603) |
del 3p26 1 | 71 (16%) | 378 |
0.0786 (0.249) |
0.413 (0.693) |
0.034 (0.14) |
0.133 (0.361) |
0.00878 (0.0564) |
0.000589 (0.00872) |
0.699 (0.898) |
0.367 (0.653) |
0.025 (0.114) |
0.159 (0.405) |
0.0116 (0.0675) |
0.957 (1.00) |
0.123 (0.346) |
del 4q22 1 | 150 (33%) | 299 |
0.0395 (0.156) |
0.352 (0.635) |
0.00979 (0.06) |
0.167 (0.415) |
0.0008 (0.0105) |
0.0204 (0.0992) |
0.318 (0.603) |
0.725 (0.904) |
0.00374 (0.0295) |
0.806 (0.952) |
0.000307 (0.00612) |
0.226 (0.506) |
0.123 (0.346) |
del 5q12 1 | 105 (23%) | 344 |
0.123 (0.346) |
0.0972 (0.289) |
0.00355 (0.0286) |
0.875 (0.996) |
0.0147 (0.0791) |
0.0216 (0.104) |
0.22 (0.498) |
1 (1.00) |
0.0356 (0.144) |
0.434 (0.717) |
0.006 (0.0433) |
0.364 (0.65) |
0.051 (0.182) |
del 10q23 31 | 108 (24%) | 341 |
0.588 (0.843) |
0.00317 (0.0267) |
0.0122 (0.0696) |
0.895 (1.00) |
0.04 (0.157) |
0.0167 (0.0865) |
0.581 (0.843) |
0.702 (0.899) |
0.0765 (0.246) |
0.285 (0.578) |
0.00894 (0.0564) |
0.778 (0.928) |
0.284 (0.578) |
del 17p12 | 252 (56%) | 197 |
0.481 (0.76) |
0.0249 (0.114) |
1e-05 (0.00039) |
0.837 (0.975) |
1e-05 (0.00039) |
0.000496 (0.00805) |
0.155 (0.398) |
1 (1.00) |
3.56e-07 (2.55e-05) |
0.258 (0.543) |
1.94e-06 (0.000128) |
0.703 (0.899) |
0.635 (0.878) |
del 18p11 31 | 247 (55%) | 202 |
0.363 (0.65) |
0.0517 (0.183) |
0.00019 (0.00418) |
0.946 (1.00) |
0.0105 (0.0617) |
1.47e-05 (0.00055) |
0.448 (0.733) |
1 (1.00) |
2.97e-11 (1.27e-08) |
0.129 (0.353) |
0.0304 (0.131) |
0.683 (0.895) |
0.632 (0.877) |
del 18q12 2 | 272 (61%) | 177 |
0.675 (0.892) |
0.0258 (0.116) |
0.00122 (0.0134) |
0.663 (0.89) |
0.0011 (0.0128) |
0.00114 (0.0128) |
0.123 (0.346) |
1 (1.00) |
9.05e-11 (2.29e-08) |
0.222 (0.5) |
0.00262 (0.0244) |
0.916 (1.00) |
1 (1.00) |
del 18q22 1 | 285 (63%) | 164 |
0.847 (0.98) |
0.0989 (0.293) |
4e-05 (0.00132) |
0.762 (0.914) |
0.00019 (0.00418) |
5.17e-05 (0.00153) |
0.031 (0.131) |
1 (1.00) |
1.29e-11 (1.1e-08) |
0.323 (0.609) |
0.000261 (0.00533) |
0.837 (0.975) |
1 (1.00) |
amp 20q11 21 | 321 (71%) | 128 |
0.842 (0.978) |
0.52 (0.788) |
0.0147 (0.0791) |
0.19 (0.456) |
0.00784 (0.0521) |
0.00596 (0.0433) |
0.209 (0.484) |
1 (1.00) |
2.02e-07 (1.92e-05) |
0.164 (0.412) |
0.0189 (0.0938) |
0.827 (0.97) |
1 (1.00) |
amp 20q12 | 322 (72%) | 127 |
0.716 (0.904) |
0.52 (0.788) |
0.00602 (0.0433) |
0.286 (0.578) |
0.0104 (0.0617) |
0.00217 (0.0212) |
0.173 (0.425) |
1 (1.00) |
2.8e-08 (4.8e-06) |
0.165 (0.412) |
0.0198 (0.0976) |
0.743 (0.906) |
1 (1.00) |
amp 20q13 12 | 324 (72%) | 125 |
0.975 (1.00) |
0.625 (0.875) |
0.00309 (0.0267) |
0.399 (0.683) |
0.00562 (0.0416) |
0.0011 (0.0128) |
0.171 (0.422) |
1 (1.00) |
7.27e-08 (1.04e-05) |
0.164 (0.412) |
0.00643 (0.0453) |
0.648 (0.883) |
1 (1.00) |
del 1p13 1 | 118 (26%) | 331 |
0.0952 (0.286) |
0.498 (0.773) |
0.00654 (0.0456) |
0.488 (0.767) |
0.00958 (0.0591) |
0.00306 (0.0267) |
0.238 (0.517) |
1 (1.00) |
0.045 (0.169) |
0.223 (0.501) |
0.00107 (0.0128) |
0.24 (0.52) |
0.303 (0.597) |
del 4q35 1 | 157 (35%) | 292 |
0.44 (0.725) |
0.107 (0.313) |
0.0482 (0.177) |
0.351 (0.635) |
0.00321 (0.0267) |
0.00998 (0.0604) |
0.375 (0.66) |
0.294 (0.587) |
0.0623 (0.21) |
0.466 (0.748) |
0.000771 (0.0105) |
0.1 (0.296) |
0.126 (0.35) |
del 5q21 1 | 126 (28%) | 323 |
0.134 (0.363) |
0.157 (0.404) |
5e-05 (0.00153) |
1 (1.00) |
0.00158 (0.0163) |
0.00895 (0.0564) |
0.248 (0.529) |
1 (1.00) |
0.543 (0.818) |
0.323 (0.609) |
0.000501 (0.00805) |
0.453 (0.735) |
0.077 (0.246) |
del 6q26 | 61 (14%) | 388 |
0.0238 (0.111) |
0.907 (1.00) |
0.142 (0.375) |
0.519 (0.788) |
0.00272 (0.0251) |
0.0264 (0.118) |
0.679 (0.892) |
0.328 (0.613) |
1 (1.00) |
0.166 (0.413) |
0.00099 (0.0125) |
0.0433 (0.167) |
1 (1.00) |
del 12p13 2 | 60 (13%) | 389 |
0.047 (0.175) |
0.16 (0.406) |
0.147 (0.385) |
0.85 (0.982) |
0.0712 (0.235) |
0.0601 (0.203) |
0.68 (0.892) |
1 (1.00) |
0.00825 (0.054) |
0.587 (0.843) |
0.075 (0.246) |
0.736 (0.906) |
1 (1.00) |
del 15q11 2 | 176 (39%) | 273 |
0.718 (0.904) |
0.668 (0.892) |
0.0295 (0.128) |
0.977 (1.00) |
0.015 (0.0801) |
0.00316 (0.0267) |
0.561 (0.832) |
0.744 (0.906) |
0.0245 (0.114) |
0.559 (0.832) |
0.00748 (0.0501) |
0.405 (0.686) |
0.649 (0.883) |
del 15q15 2 | 171 (38%) | 278 |
0.554 (0.826) |
0.259 (0.543) |
0.0252 (0.114) |
0.951 (1.00) |
0.013 (0.0721) |
0.00037 (0.00661) |
0.56 (0.832) |
0.741 (0.906) |
0.0167 (0.0865) |
0.335 (0.622) |
0.0137 (0.0748) |
0.28 (0.573) |
0.643 (0.883) |
del 15q22 33 | 160 (36%) | 289 |
0.68 (0.892) |
0.457 (0.739) |
0.0203 (0.0992) |
0.589 (0.843) |
0.0156 (0.0826) |
0.000507 (0.00805) |
0.49 (0.767) |
0.727 (0.904) |
0.0226 (0.108) |
0.511 (0.786) |
0.00948 (0.0589) |
0.236 (0.516) |
0.628 (0.877) |
del 17q24 3 | 69 (15%) | 380 |
0.0711 (0.235) |
0.307 (0.597) |
0.00308 (0.0267) |
0.316 (0.603) |
0.0019 (0.019) |
0.00317 (0.0267) |
0.36 (0.648) |
1 (1.00) |
1 (1.00) |
0.292 (0.587) |
7.89e-05 (0.00214) |
0.276 (0.57) |
1 (1.00) |
del 19p13 3 | 63 (14%) | 386 |
0.526 (0.796) |
0.0816 (0.253) |
0.00228 (0.0219) |
0.775 (0.925) |
6e-05 (0.00172) |
0.0285 (0.126) |
0.341 (0.63) |
1 (1.00) |
0.171 (0.422) |
0.0351 (0.143) |
5.08e-06 (0.000273) |
0.889 (1.00) |
1 (1.00) |
del 22q13 32 | 158 (35%) | 291 |
0.21 (0.485) |
0.394 (0.681) |
0.00101 (0.0126) |
0.716 (0.904) |
0.0005 (0.00805) |
0.00399 (0.0308) |
0.621 (0.873) |
1 (1.00) |
0.00152 (0.0159) |
0.508 (0.783) |
0.000214 (0.0046) |
0.339 (0.629) |
0.61 (0.863) |
amp 8q24 21 | 258 (57%) | 191 |
0.346 (0.633) |
0.0558 (0.193) |
0.0293 (0.128) |
0.33 (0.615) |
0.236 (0.516) |
0.0128 (0.0714) |
0.251 (0.534) |
1 (1.00) |
0.0376 (0.15) |
0.362 (0.649) |
0.178 (0.431) |
0.585 (0.843) |
1 (1.00) |
amp 11p15 5 | 91 (20%) | 358 |
0.746 (0.906) |
0.0101 (0.0604) |
0.442 (0.726) |
0.245 (0.529) |
0.0501 (0.179) |
0.128 (0.353) |
0.725 (0.904) |
0.692 (0.898) |
0.00317 (0.0267) |
0.532 (0.803) |
0.0449 (0.169) |
0.318 (0.603) |
1 (1.00) |
amp 16p11 2 | 125 (28%) | 324 |
0.589 (0.843) |
0.325 (0.609) |
0.00059 (0.00872) |
0.451 (0.734) |
0.00037 (0.00661) |
0.286 (0.578) |
0.752 (0.908) |
1 (1.00) |
0.0019 (0.019) |
0.876 (0.996) |
0.000156 (0.00373) |
0.498 (0.773) |
0.31 (0.597) |
amp 16q12 1 | 111 (25%) | 338 |
0.134 (0.361) |
0.141 (0.373) |
0.00037 (0.00661) |
0.867 (0.993) |
0.00104 (0.0127) |
0.872 (0.995) |
0.662 (0.89) |
1 (1.00) |
0.00236 (0.0222) |
0.748 (0.906) |
0.000439 (0.00754) |
0.294 (0.587) |
0.259 (0.543) |
amp 20p12 1 | 195 (43%) | 254 |
0.257 (0.543) |
0.465 (0.748) |
0.016 (0.0839) |
0.672 (0.892) |
0.233 (0.516) |
0.000819 (0.0105) |
0.217 (0.495) |
0.0447 (0.169) |
0.0376 (0.15) |
0.0817 (0.253) |
0.198 (0.466) |
0.577 (0.843) |
0.646 (0.883) |
amp 20p11 21 | 251 (56%) | 198 |
0.517 (0.788) |
0.723 (0.904) |
0.00174 (0.0178) |
0.546 (0.821) |
0.232 (0.516) |
0.000572 (0.00872) |
0.184 (0.444) |
0.309 (0.597) |
0.00143 (0.0151) |
0.0408 (0.16) |
0.344 (0.632) |
0.824 (0.967) |
0.632 (0.877) |
del 5q22 2 | 129 (29%) | 320 |
0.115 (0.328) |
0.247 (0.529) |
0.0045 (0.0343) |
0.996 (1.00) |
0.0416 (0.161) |
0.00342 (0.0279) |
0.0952 (0.286) |
0.712 (0.904) |
0.174 (0.427) |
0.112 (0.324) |
0.0182 (0.091) |
0.416 (0.695) |
0.0797 (0.251) |
del 10p15 3 | 78 (17%) | 371 |
0.976 (1.00) |
0.341 (0.63) |
0.00115 (0.0128) |
0.904 (1.00) |
0.011 (0.064) |
0.00106 (0.0128) |
0.901 (1.00) |
0.686 (0.897) |
0.37 (0.654) |
0.676 (0.892) |
0.00361 (0.0286) |
0.516 (0.788) |
0.565 (0.834) |
del 14q31 1 | 149 (33%) | 300 |
0.709 (0.904) |
0.209 (0.484) |
0.306 (0.597) |
0.309 (0.597) |
0.031 (0.131) |
0.00929 (0.0582) |
0.367 (0.653) |
0.724 (0.904) |
3.01e-07 (2.55e-05) |
0.365 (0.651) |
0.0126 (0.0711) |
0.939 (1.00) |
1 (1.00) |
del 15q21 1 | 168 (37%) | 281 |
0.389 (0.676) |
0.639 (0.881) |
0.105 (0.309) |
0.994 (1.00) |
0.0551 (0.192) |
0.000651 (0.00901) |
0.38 (0.666) |
0.735 (0.906) |
0.0233 (0.109) |
0.159 (0.405) |
0.0482 (0.177) |
0.195 (0.46) |
0.625 (0.875) |
amp 2q33 1 | 92 (20%) | 357 |
0.083 (0.255) |
0.572 (0.842) |
0.308 (0.597) |
0.702 (0.899) |
0.012 (0.0694) |
0.385 (0.671) |
0.414 (0.694) |
0.69 (0.898) |
0.615 (0.866) |
0.0472 (0.175) |
0.0105 (0.0617) |
0.247 (0.529) |
0.235 (0.516) |
amp 5p13 2 | 86 (19%) | 363 |
0.611 (0.864) |
0.0815 (0.253) |
0.0944 (0.285) |
0.51 (0.785) |
0.0326 (0.136) |
0.0771 (0.246) |
0.472 (0.752) |
1 (1.00) |
1 (1.00) |
0.167 (0.415) |
0.0177 (0.0892) |
0.284 (0.578) |
0.581 (0.843) |
amp 6p21 1 | 96 (21%) | 353 |
0.934 (1.00) |
0.689 (0.898) |
0.0351 (0.143) |
0.623 (0.875) |
0.00701 (0.0474) |
0.317 (0.603) |
0.302 (0.597) |
1 (1.00) |
0.184 (0.444) |
0.713 (0.904) |
0.00674 (0.0462) |
0.161 (0.406) |
0.577 (0.843) |
amp 17q12 | 114 (25%) | 335 |
0.136 (0.364) |
0.35 (0.635) |
0.19 (0.456) |
0.0646 (0.217) |
0.148 (0.386) |
0.00387 (0.0302) |
0.194 (0.46) |
0.698 (0.898) |
0.159 (0.405) |
0.216 (0.495) |
0.139 (0.37) |
0.306 (0.597) |
0.0575 (0.196) |
amp 17q24 1 | 106 (24%) | 343 |
0.0345 (0.141) |
0.552 (0.824) |
0.689 (0.898) |
0.195 (0.46) |
0.371 (0.655) |
0.141 (0.373) |
0.739 (0.906) |
0.695 (0.898) |
0.0767 (0.246) |
0.347 (0.633) |
0.754 (0.908) |
0.803 (0.952) |
0.049 (0.177) |
del 3p14 2 | 87 (19%) | 362 |
0.35 (0.635) |
0.442 (0.726) |
0.382 (0.668) |
0.15 (0.391) |
0.0726 (0.239) |
0.0533 (0.188) |
0.72 (0.904) |
0.215 (0.494) |
0.307 (0.597) |
0.813 (0.956) |
0.0248 (0.114) |
0.662 (0.89) |
0.581 (0.843) |
del 6p25 3 | 55 (12%) | 394 |
0.232 (0.516) |
0.0502 (0.179) |
0.745 (0.906) |
0.494 (0.77) |
0.832 (0.974) |
0.676 (0.892) |
0.0443 (0.169) |
0.3 (0.594) |
0.401 (0.683) |
0.352 (0.635) |
0.871 (0.995) |
0.0452 (0.17) |
1 (1.00) |
del 16p13 3 | 56 (12%) | 393 |
0.00451 (0.0343) |
0.725 (0.904) |
0.0332 (0.138) |
0.0293 (0.128) |
0.205 (0.477) |
0.204 (0.477) |
0.671 (0.892) |
0.608 (0.862) |
0.839 (0.975) |
0.421 (0.701) |
0.0942 (0.285) |
0.347 (0.633) |
0.453 (0.735) |
del 21q11 2 | 140 (31%) | 309 |
0.45 (0.734) |
0.861 (0.991) |
0.259 (0.543) |
0.4 (0.683) |
0.0436 (0.167) |
0.137 (0.367) |
0.838 (0.975) |
0.475 (0.753) |
0.00061 (0.00872) |
0.551 (0.824) |
0.0555 (0.193) |
0.564 (0.834) |
0.091 (0.277) |
del 2q22 1 | 24 (5%) | 425 |
0.783 (0.931) |
0.754 (0.908) |
0.202 (0.475) |
0.283 (0.578) |
0.0831 (0.255) |
1 (1.00) |
0.676 (0.892) |
1 (1.00) |
1 (1.00) |
0.736 (0.906) |
0.00893 (0.0564) |
0.00605 (0.0433) |
1 (1.00) |
del 9p21 3 | 61 (14%) | 388 |
0.879 (0.996) |
0.0761 (0.246) |
0.679 (0.892) |
0.652 (0.883) |
0.394 (0.681) |
0.699 (0.898) |
0.129 (0.353) |
0.37 (0.654) |
0.00824 (0.054) |
0.246 (0.529) |
0.125 (0.348) |
0.401 (0.683) |
0.443 (0.726) |
del 13q14 13 | 19 (4%) | 430 |
0.905 (1.00) |
0.194 (0.46) |
0.294 (0.587) |
0.712 (0.904) |
0.0366 (0.148) |
1 (1.00) |
0.815 (0.958) |
1 (1.00) |
1 (1.00) |
0.878 (0.996) |
0.136 (0.365) |
0.0314 (0.131) |
1 (1.00) |
del 7q31 1 | 13 (3%) | 436 |
0.483 (0.762) |
0.905 (1.00) |
0.727 (0.904) |
0.574 (0.843) |
1 (1.00) |
1 (1.00) |
0.78 (0.928) |
0.235 (0.516) |
1 (1.00) |
1 (1.00) |
0.694 (0.898) |
0.804 (0.952) |
0.00699 (0.0474) |
del 8q11 1 | 30 (7%) | 419 |
0.976 (1.00) |
0.413 (0.693) |
0.114 (0.328) |
0.632 (0.877) |
0.13 (0.356) |
0.406 (0.686) |
1 (1.00) |
1 (1.00) |
1 (1.00) |
0.584 (0.843) |
0.0965 (0.288) |
0.0545 (0.191) |
1 (1.00) |
del 16q23 1 | 60 (13%) | 389 |
0.0176 (0.0892) |
0.654 (0.885) |
0.902 (1.00) |
0.644 (0.883) |
0.572 (0.842) |
0.316 (0.603) |
0.491 (0.767) |
1 (1.00) |
0.548 (0.821) |
0.85 (0.982) |
0.435 (0.718) |
0.0849 (0.26) |
0.0856 (0.261) |
del 20p12 1 | 86 (19%) | 363 |
0.131 (0.357) |
0.656 (0.886) |
0.664 (0.891) |
0.549 (0.822) |
0.434 (0.717) |
0.866 (0.993) |
0.811 (0.956) |
0.219 (0.496) |
0.0217 (0.104) |
0.471 (0.752) |
0.252 (0.534) |
0.422 (0.703) |
1 (1.00) |
amp 8p11 23 | 157 (35%) | 292 |
0.388 (0.675) |
0.377 (0.662) |
0.478 (0.756) |
0.671 (0.892) |
0.695 (0.898) |
0.773 (0.924) |
0.767 (0.919) |
0.725 (0.904) |
0.115 (0.328) |
0.645 (0.883) |
0.693 (0.898) |
0.6 (0.855) |
1 (1.00) |
amp 8p11 21 | 187 (42%) | 262 |
0.52 (0.788) |
0.309 (0.597) |
0.648 (0.883) |
0.508 (0.783) |
0.667 (0.892) |
0.491 (0.767) |
0.151 (0.391) |
0.505 (0.782) |
0.211 (0.486) |
0.193 (0.46) |
0.742 (0.906) |
0.234 (0.516) |
0.638 (0.88) |
amp 12p13 33 | 112 (25%) | 337 |
0.246 (0.529) |
0.268 (0.556) |
0.218 (0.495) |
0.153 (0.396) |
0.266 (0.552) |
0.752 (0.908) |
0.743 (0.906) |
1 (1.00) |
0.875 (0.996) |
0.244 (0.528) |
0.376 (0.661) |
0.519 (0.788) |
0.575 (0.843) |
amp 17p11 2 | 44 (10%) | 405 |
0.588 (0.843) |
0.613 (0.866) |
0.587 (0.843) |
0.472 (0.752) |
0.635 (0.878) |
0.65 (0.883) |
0.634 (0.878) |
1 (1.00) |
1 (1.00) |
0.859 (0.991) |
0.68 (0.892) |
0.177 (0.431) |
1 (1.00) |
amp 19q13 11 | 95 (21%) | 354 |
0.292 (0.587) |
0.953 (1.00) |
0.717 (0.904) |
0.471 (0.752) |
0.112 (0.324) |
0.233 (0.516) |
0.107 (0.313) |
0.417 (0.697) |
0.741 (0.906) |
0.868 (0.993) |
0.734 (0.906) |
0.972 (1.00) |
1 (1.00) |
del 2p21 | 17 (4%) | 432 |
0.96 (1.00) |
0.456 (0.738) |
0.177 (0.431) |
0.647 (0.883) |
0.406 (0.686) |
0.328 (0.613) |
0.805 (0.952) |
1 (1.00) |
0.488 (0.767) |
0.663 (0.89) |
0.464 (0.748) |
0.607 (0.862) |
0.126 (0.35) |
del 3q26 31 | 46 (10%) | 403 |
0.908 (1.00) |
0.43 (0.713) |
0.277 (0.57) |
0.276 (0.57) |
0.194 (0.46) |
0.263 (0.548) |
0.535 (0.807) |
0.606 (0.862) |
0.175 (0.429) |
0.836 (0.975) |
0.278 (0.57) |
0.587 (0.843) |
1 (1.00) |
P value = 0.012 (Fisher's exact test), Q value = 0.069
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
AMP PEAK 1(2Q33.1) MUTATED | 43 | 23 | 26 |
AMP PEAK 1(2Q33.1) WILD-TYPE | 219 | 82 | 56 |
P value = 0.0472 (Fisher's exact test), Q value = 0.18
nPatients | R0 | R1 | R2 | RX |
---|---|---|---|---|
ALL | 323 | 4 | 25 | 25 |
AMP PEAK 1(2Q33.1) MUTATED | 59 | 3 | 6 | 6 |
AMP PEAK 1(2Q33.1) WILD-TYPE | 264 | 1 | 19 | 19 |
P value = 0.0105 (Wilcoxon-test), Q value = 0.062
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
AMP PEAK 1(2Q33.1) MUTATED | 89 | 2.8 (4.4) |
AMP PEAK 1(2Q33.1) WILD-TYPE | 335 | 1.9 (4.4) |
P value = 0.0326 (Fisher's exact test), Q value = 0.14
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
AMP PEAK 2(5P13.2) MUTATED | 42 | 20 | 24 |
AMP PEAK 2(5P13.2) WILD-TYPE | 220 | 85 | 58 |
P value = 0.0771 (Fisher's exact test), Q value = 0.25
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
AMP PEAK 2(5P13.2) MUTATED | 55 | 17 |
AMP PEAK 2(5P13.2) WILD-TYPE | 273 | 47 |
P value = 0.0177 (Wilcoxon-test), Q value = 0.089
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
AMP PEAK 2(5P13.2) MUTATED | 83 | 3.0 (4.6) |
AMP PEAK 2(5P13.2) WILD-TYPE | 341 | 1.9 (4.4) |
P value = 0.0351 (Fisher's exact test), Q value = 0.14
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
AMP PEAK 3(6P21.1) MUTATED | 13 | 0 | 2 | 24 | 1 | 0 | 2 | 4 | 15 | 15 | 10 | 6 | 1 |
AMP PEAK 3(6P21.1) WILD-TYPE | 61 | 1 | 27 | 108 | 9 | 1 | 18 | 4 | 44 | 26 | 35 | 11 | 1 |
P value = 0.00701 (Fisher's exact test), Q value = 0.047
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
AMP PEAK 3(6P21.1) MUTATED | 46 | 22 | 28 |
AMP PEAK 3(6P21.1) WILD-TYPE | 216 | 83 | 54 |
P value = 0.00674 (Wilcoxon-test), Q value = 0.046
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
AMP PEAK 3(6P21.1) MUTATED | 93 | 3.3 (5.6) |
AMP PEAK 3(6P21.1) WILD-TYPE | 331 | 1.7 (4.0) |
P value = 0.0558 (Wilcoxon-test), Q value = 0.19
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
AMP PEAK 6(8Q24.21) MUTATED | 257 | 66.0 (12.9) |
AMP PEAK 6(8Q24.21) WILD-TYPE | 190 | 68.1 (13.3) |
P value = 0.0293 (Fisher's exact test), Q value = 0.13
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
AMP PEAK 6(8Q24.21) MUTATED | 41 | 0 | 19 | 68 | 3 | 1 | 9 | 7 | 34 | 24 | 33 | 13 | 0 |
AMP PEAK 6(8Q24.21) WILD-TYPE | 33 | 1 | 10 | 64 | 7 | 0 | 11 | 1 | 25 | 17 | 12 | 4 | 2 |
P value = 0.0128 (Fisher's exact test), Q value = 0.071
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
AMP PEAK 6(8Q24.21) MUTATED | 180 | 46 |
AMP PEAK 6(8Q24.21) WILD-TYPE | 148 | 18 |
P value = 0.0376 (Fisher's exact test), Q value = 0.15
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 6(8Q24.21) MUTATED | 228 | 28 |
AMP PEAK 6(8Q24.21) WILD-TYPE | 154 | 34 |
P value = 0.0101 (Wilcoxon-test), Q value = 0.06
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
AMP PEAK 7(11P15.5) MUTATED | 91 | 63.9 (12.7) |
AMP PEAK 7(11P15.5) WILD-TYPE | 356 | 67.7 (13.0) |
P value = 0.0501 (Fisher's exact test), Q value = 0.18
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
AMP PEAK 7(11P15.5) MUTATED | 43 | 27 | 21 |
AMP PEAK 7(11P15.5) WILD-TYPE | 219 | 78 | 61 |
P value = 0.00317 (Fisher's exact test), Q value = 0.027
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 7(11P15.5) MUTATED | 85 | 4 |
AMP PEAK 7(11P15.5) WILD-TYPE | 297 | 58 |
P value = 0.0449 (Wilcoxon-test), Q value = 0.17
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
AMP PEAK 7(11P15.5) MUTATED | 86 | 2.8 (6.2) |
AMP PEAK 7(11P15.5) WILD-TYPE | 338 | 1.9 (3.9) |
P value = 0.00061 (Fisher's exact test), Q value = 0.0087
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
AMP PEAK 9(13Q12.13) MUTATED | 43 | 0 | 15 | 69 | 4 | 1 | 11 | 8 | 40 | 26 | 37 | 14 | 0 |
AMP PEAK 9(13Q12.13) WILD-TYPE | 31 | 1 | 14 | 63 | 6 | 0 | 9 | 0 | 19 | 15 | 8 | 3 | 2 |
P value = 0.00137 (Fisher's exact test), Q value = 0.015
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
AMP PEAK 9(13Q12.13) MUTATED | 142 | 76 | 57 |
AMP PEAK 9(13Q12.13) WILD-TYPE | 120 | 29 | 25 |
P value = 0.00114 (Fisher's exact test), Q value = 0.013
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
AMP PEAK 9(13Q12.13) MUTATED | 191 | 51 |
AMP PEAK 9(13Q12.13) WILD-TYPE | 137 | 13 |
P value = 1.77e-07 (Fisher's exact test), Q value = 1.9e-05
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 9(13Q12.13) MUTATED | 254 | 19 |
AMP PEAK 9(13Q12.13) WILD-TYPE | 128 | 43 |
P value = 0.0275 (Fisher's exact test), Q value = 0.12
nPatients | R0 | R1 | R2 | RX |
---|---|---|---|---|
ALL | 323 | 4 | 25 | 25 |
AMP PEAK 9(13Q12.13) MUTATED | 195 | 2 | 20 | 10 |
AMP PEAK 9(13Q12.13) WILD-TYPE | 128 | 2 | 5 | 15 |
P value = 0.0023 (Wilcoxon-test), Q value = 0.022
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
AMP PEAK 9(13Q12.13) MUTATED | 265 | 2.4 (4.8) |
AMP PEAK 9(13Q12.13) WILD-TYPE | 159 | 1.5 (3.7) |
P value = 0.00019 (Fisher's exact test), Q value = 0.0042
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
AMP PEAK 10(13Q22.1) MUTATED | 45 | 0 | 16 | 66 | 3 | 1 | 12 | 8 | 41 | 28 | 36 | 14 | 0 |
AMP PEAK 10(13Q22.1) WILD-TYPE | 29 | 1 | 13 | 66 | 7 | 0 | 8 | 0 | 18 | 13 | 9 | 3 | 2 |
P value = 0.00023 (Fisher's exact test), Q value = 0.0048
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
AMP PEAK 10(13Q22.1) MUTATED | 141 | 78 | 58 |
AMP PEAK 10(13Q22.1) WILD-TYPE | 121 | 27 | 24 |
P value = 0.00306 (Fisher's exact test), Q value = 0.027
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
AMP PEAK 10(13Q22.1) MUTATED | 192 | 50 |
AMP PEAK 10(13Q22.1) WILD-TYPE | 136 | 14 |
P value = 1.68e-07 (Fisher's exact test), Q value = 1.9e-05
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 10(13Q22.1) MUTATED | 255 | 19 |
AMP PEAK 10(13Q22.1) WILD-TYPE | 127 | 43 |
P value = 0.0571 (Fisher's exact test), Q value = 0.2
nPatients | R0 | R1 | R2 | RX |
---|---|---|---|---|
ALL | 323 | 4 | 25 | 25 |
AMP PEAK 10(13Q22.1) MUTATED | 196 | 2 | 19 | 10 |
AMP PEAK 10(13Q22.1) WILD-TYPE | 127 | 2 | 6 | 15 |
P value = 0.0021 (Wilcoxon-test), Q value = 0.021
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
AMP PEAK 10(13Q22.1) MUTATED | 269 | 2.4 (4.8) |
AMP PEAK 10(13Q22.1) WILD-TYPE | 155 | 1.5 (3.7) |
P value = 0.00059 (Fisher's exact test), Q value = 0.0087
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
AMP PEAK 11(16P11.2) MUTATED | 14 | 1 | 3 | 30 | 1 | 0 | 6 | 7 | 19 | 17 | 15 | 5 | 1 |
AMP PEAK 11(16P11.2) WILD-TYPE | 60 | 0 | 26 | 102 | 9 | 1 | 14 | 1 | 40 | 24 | 30 | 12 | 1 |
P value = 0.00037 (Fisher's exact test), Q value = 0.0066
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
AMP PEAK 11(16P11.2) MUTATED | 55 | 37 | 33 |
AMP PEAK 11(16P11.2) WILD-TYPE | 207 | 68 | 49 |
P value = 0.0019 (Fisher's exact test), Q value = 0.019
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 11(16P11.2) MUTATED | 115 | 7 |
AMP PEAK 11(16P11.2) WILD-TYPE | 267 | 55 |
P value = 0.000156 (Wilcoxon-test), Q value = 0.0037
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
AMP PEAK 11(16P11.2) MUTATED | 119 | 3.2 (6.2) |
AMP PEAK 11(16P11.2) WILD-TYPE | 305 | 1.6 (3.4) |
P value = 0.00037 (Fisher's exact test), Q value = 0.0066
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
AMP PEAK 12(16Q12.1) MUTATED | 14 | 1 | 3 | 23 | 1 | 0 | 6 | 7 | 19 | 15 | 11 | 4 | 1 |
AMP PEAK 12(16Q12.1) WILD-TYPE | 60 | 0 | 26 | 109 | 9 | 1 | 14 | 1 | 40 | 26 | 34 | 13 | 1 |
P value = 0.00104 (Fisher's exact test), Q value = 0.013
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
AMP PEAK 12(16Q12.1) MUTATED | 48 | 35 | 28 |
AMP PEAK 12(16Q12.1) WILD-TYPE | 214 | 70 | 54 |
P value = 0.00236 (Fisher's exact test), Q value = 0.022
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 12(16Q12.1) MUTATED | 103 | 6 |
AMP PEAK 12(16Q12.1) WILD-TYPE | 279 | 56 |
P value = 0.000439 (Wilcoxon-test), Q value = 0.0075
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
AMP PEAK 12(16Q12.1) MUTATED | 106 | 3.2 (6.2) |
AMP PEAK 12(16Q12.1) WILD-TYPE | 318 | 1.7 (3.6) |
P value = 0.0646 (Fisher's exact test), Q value = 0.22
nPatients | T1 | T2 | T3 | T4 |
---|---|---|---|---|
ALL | 11 | 77 | 305 | 55 |
AMP PEAK 14(17Q12) MUTATED | 5 | 13 | 85 | 11 |
AMP PEAK 14(17Q12) WILD-TYPE | 6 | 64 | 220 | 44 |
P value = 0.00387 (Fisher's exact test), Q value = 0.03
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
AMP PEAK 14(17Q12) MUTATED | 70 | 25 |
AMP PEAK 14(17Q12) WILD-TYPE | 258 | 39 |
P value = 0.0575 (Fisher's exact test), Q value = 0.2
nPatients | HISPANIC OR LATINO | NOT HISPANIC OR LATINO |
---|---|---|
ALL | 4 | 269 |
AMP PEAK 14(17Q12) MUTATED | 3 | 69 |
AMP PEAK 14(17Q12) WILD-TYPE | 1 | 200 |
P value = 0.0345 (logrank test), Q value = 0.14
nPatients | nDeath | Duration Range (Median), Month | |
---|---|---|---|
ALL | 436 | 101 | 0.0 - 148.0 (22.0) |
AMP PEAK 15(17Q24.1) MUTATED | 103 | 15 | 0.9 - 148.0 (24.3) |
AMP PEAK 15(17Q24.1) WILD-TYPE | 333 | 86 | 0.0 - 140.4 (21.8) |
P value = 0.0767 (Fisher's exact test), Q value = 0.25
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 15(17Q24.1) MUTATED | 96 | 9 |
AMP PEAK 15(17Q24.1) WILD-TYPE | 286 | 53 |
P value = 0.049 (Fisher's exact test), Q value = 0.18
nPatients | HISPANIC OR LATINO | NOT HISPANIC OR LATINO |
---|---|---|
ALL | 4 | 269 |
AMP PEAK 15(17Q24.1) MUTATED | 3 | 65 |
AMP PEAK 15(17Q24.1) WILD-TYPE | 1 | 204 |
P value = 0.016 (Fisher's exact test), Q value = 0.084
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
AMP PEAK 17(20P12.1) MUTATED | 36 | 1 | 10 | 48 | 3 | 0 | 7 | 6 | 21 | 17 | 30 | 9 | 1 |
AMP PEAK 17(20P12.1) WILD-TYPE | 38 | 0 | 19 | 84 | 7 | 1 | 13 | 2 | 38 | 24 | 15 | 8 | 1 |
P value = 0.000819 (Fisher's exact test), Q value = 0.01
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
AMP PEAK 17(20P12.1) MUTATED | 128 | 40 |
AMP PEAK 17(20P12.1) WILD-TYPE | 200 | 24 |
P value = 0.0447 (Fisher's exact test), Q value = 0.17
nPatients | NO | YES |
---|---|---|
ALL | 370 | 9 |
AMP PEAK 17(20P12.1) MUTATED | 158 | 7 |
AMP PEAK 17(20P12.1) WILD-TYPE | 212 | 2 |
P value = 0.0376 (Fisher's exact test), Q value = 0.15
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 17(20P12.1) MUTATED | 174 | 19 |
AMP PEAK 17(20P12.1) WILD-TYPE | 208 | 43 |
P value = 0.00081 (Fisher's exact test), Q value = 0.01
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
AMP PEAK 18(20P11.23) MUTATED | 35 | 1 | 11 | 57 | 3 | 0 | 9 | 8 | 25 | 19 | 34 | 10 | 1 |
AMP PEAK 18(20P11.23) WILD-TYPE | 39 | 0 | 18 | 75 | 7 | 1 | 11 | 0 | 34 | 22 | 11 | 7 | 1 |
P value = 0.052 (Fisher's exact test), Q value = 0.18
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
AMP PEAK 18(20P11.23) MUTATED | 116 | 61 | 42 |
AMP PEAK 18(20P11.23) WILD-TYPE | 146 | 44 | 40 |
P value = 0.000326 (Fisher's exact test), Q value = 0.0064
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
AMP PEAK 18(20P11.23) MUTATED | 148 | 45 |
AMP PEAK 18(20P11.23) WILD-TYPE | 180 | 19 |
P value = 0.0132 (Fisher's exact test), Q value = 0.073
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 18(20P11.23) MUTATED | 197 | 21 |
AMP PEAK 18(20P11.23) WILD-TYPE | 185 | 41 |
P value = 0.0159 (Fisher's exact test), Q value = 0.084
nPatients | R0 | R1 | R2 | RX |
---|---|---|---|---|
ALL | 323 | 4 | 25 | 25 |
AMP PEAK 18(20P11.23) MUTATED | 149 | 3 | 19 | 11 |
AMP PEAK 18(20P11.23) WILD-TYPE | 174 | 1 | 6 | 14 |
P value = 0.0775 (Wilcoxon-test), Q value = 0.25
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
AMP PEAK 18(20P11.23) MUTATED | 208 | 2.3 (4.9) |
AMP PEAK 18(20P11.23) WILD-TYPE | 216 | 1.8 (3.9) |
P value = 0.00174 (Fisher's exact test), Q value = 0.018
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
AMP PEAK 19(20P11.21) MUTATED | 43 | 1 | 15 | 66 | 3 | 0 | 8 | 8 | 29 | 22 | 36 | 11 | 1 |
AMP PEAK 19(20P11.21) WILD-TYPE | 31 | 0 | 14 | 66 | 7 | 1 | 12 | 0 | 30 | 19 | 9 | 6 | 1 |
P value = 0.000572 (Fisher's exact test), Q value = 0.0087
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
AMP PEAK 19(20P11.21) MUTATED | 170 | 48 |
AMP PEAK 19(20P11.21) WILD-TYPE | 158 | 16 |
P value = 0.00143 (Fisher's exact test), Q value = 0.015
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 19(20P11.21) MUTATED | 226 | 23 |
AMP PEAK 19(20P11.21) WILD-TYPE | 156 | 39 |
P value = 0.0408 (Fisher's exact test), Q value = 0.16
nPatients | R0 | R1 | R2 | RX |
---|---|---|---|---|
ALL | 323 | 4 | 25 | 25 |
AMP PEAK 19(20P11.21) MUTATED | 174 | 3 | 20 | 12 |
AMP PEAK 19(20P11.21) WILD-TYPE | 149 | 1 | 5 | 13 |
P value = 0.0147 (Fisher's exact test), Q value = 0.079
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
AMP PEAK 20(20Q11.21) MUTATED | 53 | 1 | 17 | 85 | 4 | 1 | 14 | 8 | 43 | 32 | 39 | 15 | 1 |
AMP PEAK 20(20Q11.21) WILD-TYPE | 21 | 0 | 12 | 47 | 6 | 0 | 6 | 0 | 16 | 9 | 6 | 2 | 1 |
P value = 0.00784 (Fisher's exact test), Q value = 0.052
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
AMP PEAK 20(20Q11.21) MUTATED | 173 | 85 | 63 |
AMP PEAK 20(20Q11.21) WILD-TYPE | 89 | 20 | 19 |
P value = 0.00596 (Fisher's exact test), Q value = 0.043
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
AMP PEAK 20(20Q11.21) MUTATED | 227 | 55 |
AMP PEAK 20(20Q11.21) WILD-TYPE | 101 | 9 |
P value = 2.02e-07 (Fisher's exact test), Q value = 1.9e-05
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 20(20Q11.21) MUTATED | 291 | 26 |
AMP PEAK 20(20Q11.21) WILD-TYPE | 91 | 36 |
P value = 0.0189 (Wilcoxon-test), Q value = 0.094
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
AMP PEAK 20(20Q11.21) MUTATED | 307 | 2.3 (4.7) |
AMP PEAK 20(20Q11.21) WILD-TYPE | 117 | 1.6 (3.5) |
P value = 0.00602 (Fisher's exact test), Q value = 0.043
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
AMP PEAK 21(20Q12) MUTATED | 53 | 1 | 17 | 86 | 4 | 1 | 13 | 8 | 43 | 32 | 39 | 16 | 1 |
AMP PEAK 21(20Q12) WILD-TYPE | 21 | 0 | 12 | 46 | 6 | 0 | 7 | 0 | 16 | 9 | 6 | 1 | 1 |
P value = 0.0104 (Fisher's exact test), Q value = 0.062
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
AMP PEAK 21(20Q12) MUTATED | 174 | 85 | 63 |
AMP PEAK 21(20Q12) WILD-TYPE | 88 | 20 | 19 |
P value = 0.00217 (Fisher's exact test), Q value = 0.021
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
AMP PEAK 21(20Q12) MUTATED | 227 | 56 |
AMP PEAK 21(20Q12) WILD-TYPE | 101 | 8 |
P value = 2.8e-08 (Fisher's exact test), Q value = 4.8e-06
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 21(20Q12) MUTATED | 293 | 25 |
AMP PEAK 21(20Q12) WILD-TYPE | 89 | 37 |
P value = 0.0198 (Wilcoxon-test), Q value = 0.098
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
AMP PEAK 21(20Q12) MUTATED | 307 | 2.3 (4.7) |
AMP PEAK 21(20Q12) WILD-TYPE | 117 | 1.6 (3.6) |
P value = 0.00309 (Fisher's exact test), Q value = 0.027
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
AMP PEAK 22(20Q13.12) MUTATED | 52 | 1 | 18 | 86 | 4 | 1 | 13 | 8 | 43 | 33 | 40 | 16 | 1 |
AMP PEAK 22(20Q13.12) WILD-TYPE | 22 | 0 | 11 | 46 | 6 | 0 | 7 | 0 | 16 | 8 | 5 | 1 | 1 |
P value = 0.00562 (Fisher's exact test), Q value = 0.042
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
AMP PEAK 22(20Q13.12) MUTATED | 174 | 85 | 65 |
AMP PEAK 22(20Q13.12) WILD-TYPE | 88 | 20 | 17 |
P value = 0.0011 (Fisher's exact test), Q value = 0.013
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
AMP PEAK 22(20Q13.12) MUTATED | 228 | 57 |
AMP PEAK 22(20Q13.12) WILD-TYPE | 100 | 7 |
P value = 7.27e-08 (Fisher's exact test), Q value = 1e-05
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
AMP PEAK 22(20Q13.12) MUTATED | 294 | 26 |
AMP PEAK 22(20Q13.12) WILD-TYPE | 88 | 36 |
P value = 0.00643 (Wilcoxon-test), Q value = 0.045
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
AMP PEAK 22(20Q13.12) MUTATED | 309 | 2.3 (4.8) |
AMP PEAK 22(20Q13.12) WILD-TYPE | 115 | 1.4 (3.4) |
P value = 0.0473 (logrank test), Q value = 0.18
nPatients | nDeath | Duration Range (Median), Month | |
---|---|---|---|
ALL | 436 | 101 | 0.0 - 148.0 (22.0) |
DEL PEAK 1(1P36.11) MUTATED | 162 | 44 | 0.5 - 139.2 (22.0) |
DEL PEAK 1(1P36.11) WILD-TYPE | 274 | 57 | 0.0 - 148.0 (22.1) |
P value = 0.00042 (Fisher's exact test), Q value = 0.0074
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 1(1P36.11) MUTATED | 21 | 0 | 6 | 46 | 2 | 1 | 7 | 4 | 18 | 18 | 30 | 10 | 0 |
DEL PEAK 1(1P36.11) WILD-TYPE | 53 | 1 | 23 | 86 | 8 | 0 | 13 | 4 | 41 | 23 | 15 | 7 | 2 |
P value = 0.0172 (Fisher's exact test), Q value = 0.088
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 1(1P36.11) MUTATED | 84 | 43 | 40 |
DEL PEAK 1(1P36.11) WILD-TYPE | 178 | 62 | 42 |
P value = 1.79e-05 (Fisher's exact test), Q value = 0.00064
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 1(1P36.11) MUTATED | 109 | 40 |
DEL PEAK 1(1P36.11) WILD-TYPE | 219 | 24 |
P value = 0.000585 (Fisher's exact test), Q value = 0.0087
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 1(1P36.11) MUTATED | 155 | 11 |
DEL PEAK 1(1P36.11) WILD-TYPE | 227 | 51 |
P value = 0.00356 (Wilcoxon-test), Q value = 0.029
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 1(1P36.11) MUTATED | 156 | 2.9 (5.7) |
DEL PEAK 1(1P36.11) WILD-TYPE | 268 | 1.6 (3.4) |
P value = 0.00283 (logrank test), Q value = 0.026
nPatients | nDeath | Duration Range (Median), Month | |
---|---|---|---|
ALL | 436 | 101 | 0.0 - 148.0 (22.0) |
DEL PEAK 2(1P33) MUTATED | 119 | 37 | 0.0 - 92.8 (21.0) |
DEL PEAK 2(1P33) WILD-TYPE | 317 | 64 | 0.0 - 148.0 (23.0) |
P value = 0.0232 (Fisher's exact test), Q value = 0.11
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 2(1P33) MUTATED | 12 | 0 | 6 | 35 | 1 | 0 | 5 | 3 | 15 | 15 | 23 | 4 | 0 |
DEL PEAK 2(1P33) WILD-TYPE | 62 | 1 | 23 | 97 | 9 | 1 | 15 | 5 | 44 | 26 | 22 | 13 | 2 |
P value = 0.0294 (Fisher's exact test), Q value = 0.13
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 2(1P33) MUTATED | 60 | 33 | 30 |
DEL PEAK 2(1P33) WILD-TYPE | 202 | 72 | 52 |
P value = 0.00541 (Fisher's exact test), Q value = 0.04
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 2(1P33) MUTATED | 80 | 27 |
DEL PEAK 2(1P33) WILD-TYPE | 248 | 37 |
P value = 0.0138 (Fisher's exact test), Q value = 0.075
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 2(1P33) MUTATED | 113 | 9 |
DEL PEAK 2(1P33) WILD-TYPE | 269 | 53 |
P value = 0.00833 (Wilcoxon-test), Q value = 0.054
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 2(1P33) MUTATED | 115 | 3.1 (6.4) |
DEL PEAK 2(1P33) WILD-TYPE | 309 | 1.7 (3.4) |
P value = 0.00654 (Fisher's exact test), Q value = 0.046
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 3(1P13.1) MUTATED | 12 | 0 | 5 | 32 | 1 | 0 | 5 | 3 | 15 | 14 | 24 | 3 | 0 |
DEL PEAK 3(1P13.1) WILD-TYPE | 62 | 1 | 24 | 100 | 9 | 1 | 15 | 5 | 44 | 27 | 21 | 14 | 2 |
P value = 0.00958 (Fisher's exact test), Q value = 0.059
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 3(1P13.1) MUTATED | 56 | 31 | 31 |
DEL PEAK 3(1P13.1) WILD-TYPE | 206 | 74 | 51 |
P value = 0.00306 (Fisher's exact test), Q value = 0.027
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 3(1P13.1) MUTATED | 77 | 27 |
DEL PEAK 3(1P13.1) WILD-TYPE | 251 | 37 |
P value = 0.045 (Fisher's exact test), Q value = 0.17
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 3(1P13.1) MUTATED | 108 | 10 |
DEL PEAK 3(1P13.1) WILD-TYPE | 274 | 52 |
P value = 0.00107 (Wilcoxon-test), Q value = 0.013
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 3(1P13.1) MUTATED | 108 | 3.0 (4.7) |
DEL PEAK 3(1P13.1) WILD-TYPE | 316 | 1.8 (4.3) |
P value = 0.00893 (Wilcoxon-test), Q value = 0.056
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 5(2Q22.1) MUTATED | 22 | 2.9 (3.2) |
DEL PEAK 5(2Q22.1) WILD-TYPE | 402 | 2.0 (4.5) |
P value = 0.00605 (Fisher's exact test), Q value = 0.043
nPatients | AMERICAN INDIAN OR ALASKA NATIVE | ASIAN | BLACK OR AFRICAN AMERICAN | WHITE |
---|---|---|---|---|
ALL | 1 | 11 | 59 | 212 |
DEL PEAK 5(2Q22.1) MUTATED | 1 | 2 | 1 | 9 |
DEL PEAK 5(2Q22.1) WILD-TYPE | 0 | 9 | 58 | 203 |
P value = 0.0786 (logrank test), Q value = 0.25
nPatients | nDeath | Duration Range (Median), Month | |
---|---|---|---|
ALL | 436 | 101 | 0.0 - 148.0 (22.0) |
DEL PEAK 6(3P26.1) MUTATED | 70 | 17 | 0.2 - 85.0 (15.1) |
DEL PEAK 6(3P26.1) WILD-TYPE | 366 | 84 | 0.0 - 148.0 (23.7) |
P value = 0.034 (Fisher's exact test), Q value = 0.14
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 6(3P26.1) MUTATED | 6 | 0 | 2 | 19 | 0 | 0 | 3 | 2 | 11 | 7 | 16 | 4 | 0 |
DEL PEAK 6(3P26.1) WILD-TYPE | 68 | 1 | 27 | 113 | 10 | 1 | 17 | 6 | 48 | 34 | 29 | 13 | 2 |
P value = 0.00878 (Fisher's exact test), Q value = 0.056
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 6(3P26.1) MUTATED | 30 | 22 | 19 |
DEL PEAK 6(3P26.1) WILD-TYPE | 232 | 83 | 63 |
P value = 0.000589 (Fisher's exact test), Q value = 0.0087
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 6(3P26.1) MUTATED | 42 | 20 |
DEL PEAK 6(3P26.1) WILD-TYPE | 286 | 44 |
P value = 0.025 (Fisher's exact test), Q value = 0.11
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 6(3P26.1) MUTATED | 67 | 4 |
DEL PEAK 6(3P26.1) WILD-TYPE | 315 | 58 |
P value = 0.0116 (Wilcoxon-test), Q value = 0.068
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 6(3P26.1) MUTATED | 67 | 3.1 (5.7) |
DEL PEAK 6(3P26.1) WILD-TYPE | 357 | 1.9 (4.2) |
P value = 0.0726 (Fisher's exact test), Q value = 0.24
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 7(3P14.2) MUTATED | 42 | 23 | 22 |
DEL PEAK 7(3P14.2) WILD-TYPE | 220 | 82 | 60 |
P value = 0.0533 (Fisher's exact test), Q value = 0.19
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 7(3P14.2) MUTATED | 56 | 18 |
DEL PEAK 7(3P14.2) WILD-TYPE | 272 | 46 |
P value = 0.0248 (Wilcoxon-test), Q value = 0.11
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 7(3P14.2) MUTATED | 83 | 3.3 (6.0) |
DEL PEAK 7(3P14.2) WILD-TYPE | 341 | 1.8 (3.9) |
P value = 0.0307 (logrank test), Q value = 0.13
nPatients | nDeath | Duration Range (Median), Month | |
---|---|---|---|
ALL | 436 | 101 | 0.0 - 148.0 (22.0) |
DEL PEAK 9(4P16.2) MUTATED | 133 | 37 | 0.2 - 91.8 (22.0) |
DEL PEAK 9(4P16.2) WILD-TYPE | 303 | 64 | 0.0 - 148.0 (22.1) |
P value = 0.00063 (Fisher's exact test), Q value = 0.0089
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 9(4P16.2) MUTATED | 16 | 0 | 7 | 33 | 3 | 0 | 4 | 5 | 16 | 17 | 27 | 7 | 0 |
DEL PEAK 9(4P16.2) WILD-TYPE | 58 | 1 | 22 | 99 | 7 | 1 | 16 | 3 | 43 | 24 | 18 | 10 | 2 |
P value = 8e-04 (Fisher's exact test), Q value = 0.01
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 9(4P16.2) MUTATED | 63 | 39 | 36 |
DEL PEAK 9(4P16.2) WILD-TYPE | 199 | 66 | 46 |
P value = 4.25e-05 (Fisher's exact test), Q value = 0.0014
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 9(4P16.2) MUTATED | 85 | 34 |
DEL PEAK 9(4P16.2) WILD-TYPE | 243 | 30 |
P value = 0.0173 (Fisher's exact test), Q value = 0.088
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 9(4P16.2) MUTATED | 126 | 11 |
DEL PEAK 9(4P16.2) WILD-TYPE | 256 | 51 |
P value = 0.0791 (Fisher's exact test), Q value = 0.25
nPatients | R0 | R1 | R2 | RX |
---|---|---|---|---|
ALL | 323 | 4 | 25 | 25 |
DEL PEAK 9(4P16.2) MUTATED | 98 | 1 | 13 | 5 |
DEL PEAK 9(4P16.2) WILD-TYPE | 225 | 3 | 12 | 20 |
P value = 0.00035 (Wilcoxon-test), Q value = 0.0066
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 9(4P16.2) MUTATED | 132 | 2.9 (4.6) |
DEL PEAK 9(4P16.2) WILD-TYPE | 292 | 1.7 (4.3) |
P value = 0.077 (Fisher's exact test), Q value = 0.25
nPatients | HISPANIC OR LATINO | NOT HISPANIC OR LATINO |
---|---|---|
ALL | 4 | 269 |
DEL PEAK 9(4P16.2) MUTATED | 3 | 77 |
DEL PEAK 9(4P16.2) WILD-TYPE | 1 | 192 |
P value = 0.0395 (logrank test), Q value = 0.16
nPatients | nDeath | Duration Range (Median), Month | |
---|---|---|---|
ALL | 436 | 101 | 0.0 - 148.0 (22.0) |
DEL PEAK 10(4Q22.1) MUTATED | 147 | 41 | 0.0 - 148.0 (21.9) |
DEL PEAK 10(4Q22.1) WILD-TYPE | 289 | 60 | 0.0 - 140.4 (22.1) |
P value = 0.00979 (Fisher's exact test), Q value = 0.06
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 10(4Q22.1) MUTATED | 14 | 0 | 8 | 40 | 3 | 0 | 4 | 5 | 23 | 20 | 22 | 6 | 1 |
DEL PEAK 10(4Q22.1) WILD-TYPE | 60 | 1 | 21 | 92 | 7 | 1 | 16 | 3 | 36 | 21 | 23 | 11 | 1 |
P value = 8e-04 (Fisher's exact test), Q value = 0.01
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 10(4Q22.1) MUTATED | 69 | 44 | 37 |
DEL PEAK 10(4Q22.1) WILD-TYPE | 193 | 61 | 45 |
P value = 0.0204 (Fisher's exact test), Q value = 0.099
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 10(4Q22.1) MUTATED | 99 | 29 |
DEL PEAK 10(4Q22.1) WILD-TYPE | 229 | 35 |
P value = 0.00374 (Fisher's exact test), Q value = 0.029
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 10(4Q22.1) MUTATED | 138 | 11 |
DEL PEAK 10(4Q22.1) WILD-TYPE | 244 | 51 |
P value = 0.000307 (Wilcoxon-test), Q value = 0.0061
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 10(4Q22.1) MUTATED | 142 | 2.8 (4.5) |
DEL PEAK 10(4Q22.1) WILD-TYPE | 282 | 1.7 (4.4) |
P value = 0.0482 (Fisher's exact test), Q value = 0.18
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 11(4Q35.1) MUTATED | 17 | 0 | 8 | 44 | 2 | 0 | 6 | 5 | 21 | 19 | 24 | 7 | 1 |
DEL PEAK 11(4Q35.1) WILD-TYPE | 57 | 1 | 21 | 88 | 8 | 1 | 14 | 3 | 38 | 22 | 21 | 10 | 1 |
P value = 0.00321 (Fisher's exact test), Q value = 0.027
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 11(4Q35.1) MUTATED | 75 | 44 | 38 |
DEL PEAK 11(4Q35.1) WILD-TYPE | 187 | 61 | 44 |
P value = 0.00998 (Fisher's exact test), Q value = 0.06
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 11(4Q35.1) MUTATED | 107 | 32 |
DEL PEAK 11(4Q35.1) WILD-TYPE | 221 | 32 |
P value = 0.0623 (Fisher's exact test), Q value = 0.21
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 11(4Q35.1) MUTATED | 140 | 15 |
DEL PEAK 11(4Q35.1) WILD-TYPE | 242 | 47 |
P value = 0.000771 (Wilcoxon-test), Q value = 0.01
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 11(4Q35.1) MUTATED | 149 | 2.6 (4.3) |
DEL PEAK 11(4Q35.1) WILD-TYPE | 275 | 1.8 (4.5) |
P value = 0.00355 (Fisher's exact test), Q value = 0.029
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 12(5Q12.1) MUTATED | 17 | 0 | 5 | 19 | 1 | 0 | 3 | 5 | 14 | 16 | 13 | 8 | 1 |
DEL PEAK 12(5Q12.1) WILD-TYPE | 57 | 1 | 24 | 113 | 9 | 1 | 17 | 3 | 45 | 25 | 32 | 9 | 1 |
P value = 0.0147 (Fisher's exact test), Q value = 0.079
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 12(5Q12.1) MUTATED | 49 | 29 | 27 |
DEL PEAK 12(5Q12.1) WILD-TYPE | 213 | 76 | 55 |
P value = 0.0216 (Fisher's exact test), Q value = 0.1
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 12(5Q12.1) MUTATED | 67 | 22 |
DEL PEAK 12(5Q12.1) WILD-TYPE | 261 | 42 |
P value = 0.0356 (Fisher's exact test), Q value = 0.14
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 12(5Q12.1) MUTATED | 97 | 8 |
DEL PEAK 12(5Q12.1) WILD-TYPE | 285 | 54 |
P value = 0.006 (Wilcoxon-test), Q value = 0.043
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 12(5Q12.1) MUTATED | 101 | 2.9 (5.0) |
DEL PEAK 12(5Q12.1) WILD-TYPE | 323 | 1.8 (4.2) |
P value = 0.051 (Fisher's exact test), Q value = 0.18
nPatients | HISPANIC OR LATINO | NOT HISPANIC OR LATINO |
---|---|---|
ALL | 4 | 269 |
DEL PEAK 12(5Q12.1) MUTATED | 3 | 66 |
DEL PEAK 12(5Q12.1) WILD-TYPE | 1 | 203 |
P value = 5e-05 (Fisher's exact test), Q value = 0.0015
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 13(5Q21.1) MUTATED | 18 | 0 | 6 | 26 | 0 | 0 | 3 | 7 | 18 | 18 | 17 | 8 | 2 |
DEL PEAK 13(5Q21.1) WILD-TYPE | 56 | 1 | 23 | 106 | 10 | 1 | 17 | 1 | 41 | 23 | 28 | 9 | 0 |
P value = 0.00158 (Fisher's exact test), Q value = 0.016
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 13(5Q21.1) MUTATED | 57 | 37 | 32 |
DEL PEAK 13(5Q21.1) WILD-TYPE | 205 | 68 | 50 |
P value = 0.00895 (Fisher's exact test), Q value = 0.056
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 13(5Q21.1) MUTATED | 82 | 27 |
DEL PEAK 13(5Q21.1) WILD-TYPE | 246 | 37 |
P value = 0.000501 (Wilcoxon-test), Q value = 0.008
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 13(5Q21.1) MUTATED | 121 | 2.9 (4.9) |
DEL PEAK 13(5Q21.1) WILD-TYPE | 303 | 1.7 (4.2) |
P value = 0.077 (Fisher's exact test), Q value = 0.25
nPatients | HISPANIC OR LATINO | NOT HISPANIC OR LATINO |
---|---|---|
ALL | 4 | 269 |
DEL PEAK 13(5Q21.1) MUTATED | 3 | 77 |
DEL PEAK 13(5Q21.1) WILD-TYPE | 1 | 192 |
P value = 0.0045 (Fisher's exact test), Q value = 0.034
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 14(5Q22.2) MUTATED | 19 | 0 | 7 | 29 | 0 | 0 | 4 | 6 | 16 | 16 | 19 | 8 | 1 |
DEL PEAK 14(5Q22.2) WILD-TYPE | 55 | 1 | 22 | 103 | 10 | 1 | 16 | 2 | 43 | 25 | 26 | 9 | 1 |
P value = 0.0416 (Fisher's exact test), Q value = 0.16
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 14(5Q22.2) MUTATED | 64 | 34 | 31 |
DEL PEAK 14(5Q22.2) WILD-TYPE | 198 | 71 | 51 |
P value = 0.00342 (Fisher's exact test), Q value = 0.028
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 14(5Q22.2) MUTATED | 81 | 28 |
DEL PEAK 14(5Q22.2) WILD-TYPE | 247 | 36 |
P value = 0.0182 (Wilcoxon-test), Q value = 0.091
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 14(5Q22.2) MUTATED | 122 | 2.7 (4.8) |
DEL PEAK 14(5Q22.2) WILD-TYPE | 302 | 1.8 (4.3) |
P value = 0.0502 (Wilcoxon-test), Q value = 0.18
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
DEL PEAK 15(6P25.3) MUTATED | 55 | 69.8 (12.7) |
DEL PEAK 15(6P25.3) WILD-TYPE | 392 | 66.5 (13.1) |
P value = 0.0443 (Fisher's exact test), Q value = 0.17
nPatients | FEMALE | MALE |
---|---|---|
ALL | 213 | 236 |
DEL PEAK 15(6P25.3) MUTATED | 19 | 36 |
DEL PEAK 15(6P25.3) WILD-TYPE | 194 | 200 |
P value = 0.0452 (Fisher's exact test), Q value = 0.17
nPatients | AMERICAN INDIAN OR ALASKA NATIVE | ASIAN | BLACK OR AFRICAN AMERICAN | WHITE |
---|---|---|---|---|
ALL | 1 | 11 | 59 | 212 |
DEL PEAK 15(6P25.3) MUTATED | 0 | 3 | 2 | 26 |
DEL PEAK 15(6P25.3) WILD-TYPE | 1 | 8 | 57 | 186 |
P value = 0.0238 (logrank test), Q value = 0.11
nPatients | nDeath | Duration Range (Median), Month | |
---|---|---|---|
ALL | 436 | 101 | 0.0 - 148.0 (22.0) |
DEL PEAK 16(6Q26) MUTATED | 59 | 19 | 0.2 - 131.5 (17.8) |
DEL PEAK 16(6Q26) WILD-TYPE | 377 | 82 | 0.0 - 148.0 (23.0) |
P value = 0.00272 (Fisher's exact test), Q value = 0.025
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 16(6Q26) MUTATED | 26 | 14 | 21 |
DEL PEAK 16(6Q26) WILD-TYPE | 236 | 91 | 61 |
P value = 0.0264 (Fisher's exact test), Q value = 0.12
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 16(6Q26) MUTATED | 37 | 14 |
DEL PEAK 16(6Q26) WILD-TYPE | 291 | 50 |
P value = 0.00099 (Wilcoxon-test), Q value = 0.012
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 16(6Q26) MUTATED | 57 | 3.5 (4.6) |
DEL PEAK 16(6Q26) WILD-TYPE | 367 | 1.9 (4.4) |
P value = 0.0433 (Fisher's exact test), Q value = 0.17
nPatients | AMERICAN INDIAN OR ALASKA NATIVE | ASIAN | BLACK OR AFRICAN AMERICAN | WHITE |
---|---|---|---|---|
ALL | 1 | 11 | 59 | 212 |
DEL PEAK 16(6Q26) MUTATED | 1 | 3 | 5 | 26 |
DEL PEAK 16(6Q26) WILD-TYPE | 0 | 8 | 54 | 186 |
P value = 0.00699 (Fisher's exact test), Q value = 0.047
nPatients | HISPANIC OR LATINO | NOT HISPANIC OR LATINO |
---|---|---|
ALL | 4 | 269 |
DEL PEAK 17(7Q31.1) MUTATED | 2 | 8 |
DEL PEAK 17(7Q31.1) WILD-TYPE | 2 | 261 |
P value = 0.0708 (Wilcoxon-test), Q value = 0.23
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
DEL PEAK 18(8P23.2) MUTATED | 188 | 65.9 (12.1) |
DEL PEAK 18(8P23.2) WILD-TYPE | 259 | 67.7 (13.7) |
P value = 1e-05 (Fisher's exact test), Q value = 0.00039
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 18(8P23.2) MUTATED | 24 | 0 | 9 | 39 | 2 | 0 | 8 | 4 | 28 | 26 | 31 | 11 | 1 |
DEL PEAK 18(8P23.2) WILD-TYPE | 50 | 1 | 20 | 93 | 8 | 1 | 12 | 4 | 31 | 15 | 14 | 6 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00039
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 18(8P23.2) MUTATED | 85 | 52 | 51 |
DEL PEAK 18(8P23.2) WILD-TYPE | 177 | 53 | 31 |
P value = 2.5e-05 (Fisher's exact test), Q value = 0.00086
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 18(8P23.2) MUTATED | 124 | 43 |
DEL PEAK 18(8P23.2) WILD-TYPE | 204 | 21 |
P value = 0.0128 (Fisher's exact test), Q value = 0.071
nPatients | FEMALE | MALE |
---|---|---|
ALL | 213 | 236 |
DEL PEAK 18(8P23.2) MUTATED | 76 | 112 |
DEL PEAK 18(8P23.2) WILD-TYPE | 137 | 124 |
P value = 0.00328 (Fisher's exact test), Q value = 0.027
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 18(8P23.2) MUTATED | 170 | 15 |
DEL PEAK 18(8P23.2) WILD-TYPE | 212 | 47 |
P value = 0.023 (Fisher's exact test), Q value = 0.11
nPatients | R0 | R1 | R2 | RX |
---|---|---|---|---|
ALL | 323 | 4 | 25 | 25 |
DEL PEAK 18(8P23.2) MUTATED | 127 | 2 | 16 | 6 |
DEL PEAK 18(8P23.2) WILD-TYPE | 196 | 2 | 9 | 19 |
P value = 4.13e-06 (Wilcoxon-test), Q value = 0.00025
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 18(8P23.2) MUTATED | 182 | 3.0 (5.5) |
DEL PEAK 18(8P23.2) WILD-TYPE | 242 | 1.4 (3.3) |
P value = 0.0489 (logrank test), Q value = 0.18
nPatients | nDeath | Duration Range (Median), Month | |
---|---|---|---|
ALL | 436 | 101 | 0.0 - 148.0 (22.0) |
DEL PEAK 19(8P22) MUTATED | 199 | 55 | 0.0 - 148.0 (24.0) |
DEL PEAK 19(8P22) WILD-TYPE | 237 | 46 | 0.0 - 139.2 (21.1) |
P value = 0.0262 (Wilcoxon-test), Q value = 0.12
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
DEL PEAK 19(8P22) MUTATED | 201 | 65.7 (12.2) |
DEL PEAK 19(8P22) WILD-TYPE | 246 | 67.9 (13.7) |
P value = 1e-05 (Fisher's exact test), Q value = 0.00039
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 19(8P22) MUTATED | 25 | 0 | 10 | 41 | 2 | 0 | 9 | 5 | 31 | 27 | 31 | 14 | 1 |
DEL PEAK 19(8P22) WILD-TYPE | 49 | 1 | 19 | 91 | 8 | 1 | 11 | 3 | 28 | 14 | 14 | 3 | 1 |
P value = 0.0485 (Fisher's exact test), Q value = 0.18
nPatients | T1 | T2 | T3 | T4 |
---|---|---|---|---|
ALL | 11 | 77 | 305 | 55 |
DEL PEAK 19(8P22) MUTATED | 1 | 30 | 144 | 26 |
DEL PEAK 19(8P22) WILD-TYPE | 10 | 47 | 161 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00039
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 19(8P22) MUTATED | 90 | 56 | 55 |
DEL PEAK 19(8P22) WILD-TYPE | 172 | 49 | 27 |
P value = 4.51e-06 (Fisher's exact test), Q value = 0.00026
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 19(8P22) MUTATED | 133 | 46 |
DEL PEAK 19(8P22) WILD-TYPE | 195 | 18 |
P value = 0.0573 (Fisher's exact test), Q value = 0.2
nPatients | FEMALE | MALE |
---|---|---|
ALL | 213 | 236 |
DEL PEAK 19(8P22) MUTATED | 85 | 116 |
DEL PEAK 19(8P22) WILD-TYPE | 128 | 120 |
P value = 0.00142 (Fisher's exact test), Q value = 0.015
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 19(8P22) MUTATED | 182 | 16 |
DEL PEAK 19(8P22) WILD-TYPE | 200 | 46 |
P value = 0.0307 (Fisher's exact test), Q value = 0.13
nPatients | R0 | R1 | R2 | RX |
---|---|---|---|---|
ALL | 323 | 4 | 25 | 25 |
DEL PEAK 19(8P22) MUTATED | 139 | 2 | 16 | 6 |
DEL PEAK 19(8P22) WILD-TYPE | 184 | 2 | 9 | 19 |
P value = 3.44e-07 (Wilcoxon-test), Q value = 2.5e-05
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 19(8P22) MUTATED | 195 | 2.9 (5.4) |
DEL PEAK 19(8P22) WILD-TYPE | 229 | 1.3 (3.3) |
P value = 0.0545 (Fisher's exact test), Q value = 0.19
nPatients | AMERICAN INDIAN OR ALASKA NATIVE | ASIAN | BLACK OR AFRICAN AMERICAN | WHITE |
---|---|---|---|---|
ALL | 1 | 11 | 59 | 212 |
DEL PEAK 20(8Q11.1) MUTATED | 1 | 0 | 6 | 13 |
DEL PEAK 20(8Q11.1) WILD-TYPE | 0 | 11 | 53 | 199 |
P value = 0.0761 (Wilcoxon-test), Q value = 0.25
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
DEL PEAK 21(9P21.3) MUTATED | 61 | 64.3 (12.8) |
DEL PEAK 21(9P21.3) WILD-TYPE | 386 | 67.3 (13.1) |
P value = 0.00824 (Fisher's exact test), Q value = 0.054
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 21(9P21.3) MUTATED | 58 | 2 |
DEL PEAK 21(9P21.3) WILD-TYPE | 324 | 60 |
P value = 0.00115 (Fisher's exact test), Q value = 0.013
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 22(10P15.3) MUTATED | 10 | 0 | 7 | 12 | 1 | 1 | 1 | 3 | 12 | 8 | 16 | 4 | 1 |
DEL PEAK 22(10P15.3) WILD-TYPE | 64 | 1 | 22 | 120 | 9 | 0 | 19 | 5 | 47 | 33 | 29 | 13 | 1 |
P value = 0.011 (Fisher's exact test), Q value = 0.064
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 22(10P15.3) MUTATED | 34 | 23 | 21 |
DEL PEAK 22(10P15.3) WILD-TYPE | 228 | 82 | 61 |
P value = 0.00106 (Fisher's exact test), Q value = 0.013
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 22(10P15.3) MUTATED | 48 | 21 |
DEL PEAK 22(10P15.3) WILD-TYPE | 280 | 43 |
P value = 0.00361 (Wilcoxon-test), Q value = 0.029
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 22(10P15.3) MUTATED | 75 | 3.1 (6.4) |
DEL PEAK 22(10P15.3) WILD-TYPE | 349 | 1.9 (3.9) |
P value = 0.0433 (Wilcoxon-test), Q value = 0.17
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
DEL PEAK 23(10Q21.1) MUTATED | 97 | 64.4 (13.3) |
DEL PEAK 23(10Q21.1) WILD-TYPE | 350 | 67.6 (12.9) |
P value = 0.00644 (Fisher's exact test), Q value = 0.045
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 23(10Q21.1) MUTATED | 12 | 0 | 7 | 19 | 1 | 1 | 1 | 2 | 14 | 14 | 17 | 5 | 1 |
DEL PEAK 23(10Q21.1) WILD-TYPE | 62 | 1 | 22 | 113 | 9 | 0 | 19 | 6 | 45 | 27 | 28 | 12 | 1 |
P value = 0.0211 (Fisher's exact test), Q value = 0.1
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 23(10Q21.1) MUTATED | 46 | 25 | 26 |
DEL PEAK 23(10Q21.1) WILD-TYPE | 216 | 80 | 56 |
P value = 0.00478 (Fisher's exact test), Q value = 0.036
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 23(10Q21.1) MUTATED | 63 | 23 |
DEL PEAK 23(10Q21.1) WILD-TYPE | 265 | 41 |
P value = 0.031 (Fisher's exact test), Q value = 0.13
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 23(10Q21.1) MUTATED | 90 | 7 |
DEL PEAK 23(10Q21.1) WILD-TYPE | 292 | 55 |
P value = 0.01 (Wilcoxon-test), Q value = 0.06
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 23(10Q21.1) MUTATED | 93 | 2.9 (6.1) |
DEL PEAK 23(10Q21.1) WILD-TYPE | 331 | 1.9 (3.8) |
P value = 0.0413 (Fisher's exact test), Q value = 0.16
nPatients | HISPANIC OR LATINO | NOT HISPANIC OR LATINO |
---|---|---|
ALL | 4 | 269 |
DEL PEAK 23(10Q21.1) MUTATED | 3 | 61 |
DEL PEAK 23(10Q21.1) WILD-TYPE | 1 | 208 |
P value = 0.00317 (Wilcoxon-test), Q value = 0.027
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
DEL PEAK 24(10Q23.31) MUTATED | 108 | 63.7 (13.1) |
DEL PEAK 24(10Q23.31) WILD-TYPE | 339 | 67.9 (12.9) |
P value = 0.0122 (Fisher's exact test), Q value = 0.07
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 24(10Q23.31) MUTATED | 14 | 1 | 7 | 24 | 1 | 1 | 3 | 4 | 14 | 12 | 17 | 5 | 2 |
DEL PEAK 24(10Q23.31) WILD-TYPE | 60 | 0 | 22 | 108 | 9 | 0 | 17 | 4 | 45 | 29 | 28 | 12 | 0 |
P value = 0.04 (Fisher's exact test), Q value = 0.16
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 24(10Q23.31) MUTATED | 52 | 30 | 26 |
DEL PEAK 24(10Q23.31) WILD-TYPE | 210 | 75 | 56 |
P value = 0.0167 (Fisher's exact test), Q value = 0.086
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 24(10Q23.31) MUTATED | 73 | 24 |
DEL PEAK 24(10Q23.31) WILD-TYPE | 255 | 40 |
P value = 0.0765 (Fisher's exact test), Q value = 0.25
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 24(10Q23.31) MUTATED | 97 | 9 |
DEL PEAK 24(10Q23.31) WILD-TYPE | 285 | 53 |
P value = 0.00894 (Wilcoxon-test), Q value = 0.056
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 24(10Q23.31) MUTATED | 104 | 2.4 (3.8) |
DEL PEAK 24(10Q23.31) WILD-TYPE | 320 | 2.0 (4.6) |
P value = 0.0582 (Wilcoxon-test), Q value = 0.2
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
DEL PEAK 25(10Q25.2) MUTATED | 108 | 64.9 (13.0) |
DEL PEAK 25(10Q25.2) WILD-TYPE | 339 | 67.6 (13.0) |
P value = 0.0662 (Fisher's exact test), Q value = 0.22
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 25(10Q25.2) MUTATED | 11 | 0 | 8 | 26 | 1 | 1 | 5 | 3 | 14 | 13 | 18 | 5 | 1 |
DEL PEAK 25(10Q25.2) WILD-TYPE | 63 | 1 | 21 | 106 | 9 | 0 | 15 | 5 | 45 | 28 | 27 | 12 | 1 |
P value = 0.0125 (Fisher's exact test), Q value = 0.071
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 25(10Q25.2) MUTATED | 50 | 31 | 27 |
DEL PEAK 25(10Q25.2) WILD-TYPE | 212 | 74 | 55 |
P value = 0.018 (Fisher's exact test), Q value = 0.09
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 25(10Q25.2) MUTATED | 75 | 24 |
DEL PEAK 25(10Q25.2) WILD-TYPE | 253 | 40 |
P value = 0.077 (Fisher's exact test), Q value = 0.25
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 25(10Q25.2) MUTATED | 98 | 9 |
DEL PEAK 25(10Q25.2) WILD-TYPE | 284 | 53 |
P value = 0.0563 (Fisher's exact test), Q value = 0.19
nPatients | R0 | R1 | R2 | RX |
---|---|---|---|---|
ALL | 323 | 4 | 25 | 25 |
DEL PEAK 25(10Q25.2) MUTATED | 74 | 2 | 11 | 5 |
DEL PEAK 25(10Q25.2) WILD-TYPE | 249 | 2 | 14 | 20 |
P value = 0.00666 (Wilcoxon-test), Q value = 0.046
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 25(10Q25.2) MUTATED | 104 | 2.5 (3.9) |
DEL PEAK 25(10Q25.2) WILD-TYPE | 320 | 1.9 (4.6) |
P value = 0.047 (logrank test), Q value = 0.18
nPatients | nDeath | Duration Range (Median), Month | |
---|---|---|---|
ALL | 436 | 101 | 0.0 - 148.0 (22.0) |
DEL PEAK 26(12P13.2) MUTATED | 60 | 19 | 2.0 - 78.1 (19.6) |
DEL PEAK 26(12P13.2) WILD-TYPE | 376 | 82 | 0.0 - 148.0 (22.1) |
P value = 0.0712 (Fisher's exact test), Q value = 0.23
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 26(12P13.2) MUTATED | 27 | 19 | 14 |
DEL PEAK 26(12P13.2) WILD-TYPE | 235 | 86 | 68 |
P value = 0.0601 (Fisher's exact test), Q value = 0.2
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 26(12P13.2) MUTATED | 36 | 13 |
DEL PEAK 26(12P13.2) WILD-TYPE | 292 | 51 |
P value = 0.00825 (Fisher's exact test), Q value = 0.054
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 26(12P13.2) MUTATED | 57 | 2 |
DEL PEAK 26(12P13.2) WILD-TYPE | 325 | 60 |
P value = 0.075 (Wilcoxon-test), Q value = 0.25
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 26(12P13.2) MUTATED | 57 | 2.2 (3.4) |
DEL PEAK 26(12P13.2) WILD-TYPE | 367 | 2.1 (4.6) |
P value = 0.0366 (Fisher's exact test), Q value = 0.15
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 27(13Q14.13) MUTATED | 11 | 1 | 7 |
DEL PEAK 27(13Q14.13) WILD-TYPE | 251 | 104 | 75 |
P value = 0.0314 (Fisher's exact test), Q value = 0.13
nPatients | AMERICAN INDIAN OR ALASKA NATIVE | ASIAN | BLACK OR AFRICAN AMERICAN | WHITE |
---|---|---|---|---|
ALL | 1 | 11 | 59 | 212 |
DEL PEAK 27(13Q14.13) MUTATED | 1 | 1 | 3 | 8 |
DEL PEAK 27(13Q14.13) WILD-TYPE | 0 | 10 | 56 | 204 |
P value = 0.031 (Fisher's exact test), Q value = 0.13
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 28(14Q31.1) MUTATED | 74 | 42 | 33 |
DEL PEAK 28(14Q31.1) WILD-TYPE | 188 | 63 | 49 |
P value = 0.00929 (Fisher's exact test), Q value = 0.058
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 28(14Q31.1) MUTATED | 102 | 31 |
DEL PEAK 28(14Q31.1) WILD-TYPE | 226 | 33 |
P value = 3.01e-07 (Fisher's exact test), Q value = 2.5e-05
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 28(14Q31.1) MUTATED | 141 | 4 |
DEL PEAK 28(14Q31.1) WILD-TYPE | 241 | 58 |
P value = 0.0126 (Wilcoxon-test), Q value = 0.071
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 28(14Q31.1) MUTATED | 141 | 2.6 (4.8) |
DEL PEAK 28(14Q31.1) WILD-TYPE | 283 | 1.8 (4.2) |
P value = 0.0295 (Fisher's exact test), Q value = 0.13
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 29(15Q11.2) MUTATED | 28 | 0 | 8 | 42 | 2 | 0 | 6 | 5 | 23 | 20 | 23 | 11 | 2 |
DEL PEAK 29(15Q11.2) WILD-TYPE | 46 | 1 | 21 | 90 | 8 | 1 | 14 | 3 | 36 | 21 | 22 | 6 | 0 |
P value = 0.015 (Fisher's exact test), Q value = 0.08
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 29(15Q11.2) MUTATED | 88 | 49 | 39 |
DEL PEAK 29(15Q11.2) WILD-TYPE | 174 | 56 | 43 |
P value = 0.00316 (Fisher's exact test), Q value = 0.027
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 29(15Q11.2) MUTATED | 118 | 36 |
DEL PEAK 29(15Q11.2) WILD-TYPE | 210 | 28 |
P value = 0.0245 (Fisher's exact test), Q value = 0.11
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 29(15Q11.2) MUTATED | 157 | 16 |
DEL PEAK 29(15Q11.2) WILD-TYPE | 225 | 46 |
P value = 0.00748 (Wilcoxon-test), Q value = 0.05
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 29(15Q11.2) MUTATED | 167 | 2.4 (3.8) |
DEL PEAK 29(15Q11.2) WILD-TYPE | 257 | 1.9 (4.8) |
P value = 0.0252 (Fisher's exact test), Q value = 0.11
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 30(15Q15.2) MUTATED | 29 | 0 | 8 | 39 | 2 | 0 | 6 | 4 | 22 | 19 | 25 | 10 | 2 |
DEL PEAK 30(15Q15.2) WILD-TYPE | 45 | 1 | 21 | 93 | 8 | 1 | 14 | 4 | 37 | 22 | 20 | 7 | 0 |
P value = 0.013 (Fisher's exact test), Q value = 0.072
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 30(15Q15.2) MUTATED | 85 | 50 | 36 |
DEL PEAK 30(15Q15.2) WILD-TYPE | 177 | 55 | 46 |
P value = 0.00037 (Fisher's exact test), Q value = 0.0066
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 30(15Q15.2) MUTATED | 110 | 37 |
DEL PEAK 30(15Q15.2) WILD-TYPE | 218 | 27 |
P value = 0.0167 (Fisher's exact test), Q value = 0.086
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 30(15Q15.2) MUTATED | 153 | 15 |
DEL PEAK 30(15Q15.2) WILD-TYPE | 229 | 47 |
P value = 0.0137 (Wilcoxon-test), Q value = 0.075
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 30(15Q15.2) MUTATED | 163 | 2.3 (3.8) |
DEL PEAK 30(15Q15.2) WILD-TYPE | 261 | 2.0 (4.8) |
P value = 0.0551 (Fisher's exact test), Q value = 0.19
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 31(15Q21.1) MUTATED | 86 | 47 | 35 |
DEL PEAK 31(15Q21.1) WILD-TYPE | 176 | 58 | 47 |
P value = 0.000651 (Fisher's exact test), Q value = 0.009
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 31(15Q21.1) MUTATED | 109 | 36 |
DEL PEAK 31(15Q21.1) WILD-TYPE | 219 | 28 |
P value = 0.0233 (Fisher's exact test), Q value = 0.11
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 31(15Q21.1) MUTATED | 151 | 15 |
DEL PEAK 31(15Q21.1) WILD-TYPE | 231 | 47 |
P value = 0.0482 (Wilcoxon-test), Q value = 0.18
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 31(15Q21.1) MUTATED | 160 | 2.3 (3.8) |
DEL PEAK 31(15Q21.1) WILD-TYPE | 264 | 2.0 (4.8) |
P value = 0.0203 (Fisher's exact test), Q value = 0.099
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 32(15Q22.33) MUTATED | 23 | 0 | 7 | 39 | 2 | 0 | 5 | 4 | 19 | 20 | 23 | 11 | 1 |
DEL PEAK 32(15Q22.33) WILD-TYPE | 51 | 1 | 22 | 93 | 8 | 1 | 15 | 4 | 40 | 21 | 22 | 6 | 1 |
P value = 0.0156 (Fisher's exact test), Q value = 0.083
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 32(15Q22.33) MUTATED | 79 | 44 | 37 |
DEL PEAK 32(15Q22.33) WILD-TYPE | 183 | 61 | 45 |
P value = 0.000507 (Fisher's exact test), Q value = 0.008
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 32(15Q22.33) MUTATED | 102 | 35 |
DEL PEAK 32(15Q22.33) WILD-TYPE | 226 | 29 |
P value = 0.0226 (Fisher's exact test), Q value = 0.11
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 32(15Q22.33) MUTATED | 143 | 14 |
DEL PEAK 32(15Q22.33) WILD-TYPE | 239 | 48 |
P value = 0.00948 (Wilcoxon-test), Q value = 0.059
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 32(15Q22.33) MUTATED | 152 | 2.3 (3.8) |
DEL PEAK 32(15Q22.33) WILD-TYPE | 272 | 1.9 (4.8) |
P value = 0.00451 (logrank test), Q value = 0.034
nPatients | nDeath | Duration Range (Median), Month | |
---|---|---|---|
ALL | 436 | 101 | 0.0 - 148.0 (22.0) |
DEL PEAK 33(16P13.3) MUTATED | 54 | 19 | 0.2 - 61.8 (19.2) |
DEL PEAK 33(16P13.3) WILD-TYPE | 382 | 82 | 0.0 - 148.0 (22.2) |
P value = 0.0332 (Fisher's exact test), Q value = 0.14
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 33(16P13.3) MUTATED | 3 | 0 | 3 | 17 | 3 | 0 | 0 | 0 | 9 | 9 | 6 | 5 | 0 |
DEL PEAK 33(16P13.3) WILD-TYPE | 71 | 1 | 26 | 115 | 7 | 1 | 20 | 8 | 50 | 32 | 39 | 12 | 2 |
P value = 0.0293 (Fisher's exact test), Q value = 0.13
nPatients | T1 | T2 | T3 | T4 |
---|---|---|---|---|
ALL | 11 | 77 | 305 | 55 |
DEL PEAK 33(16P13.3) MUTATED | 0 | 3 | 45 | 8 |
DEL PEAK 33(16P13.3) WILD-TYPE | 11 | 74 | 260 | 47 |
P value = 0.0176 (logrank test), Q value = 0.089
nPatients | nDeath | Duration Range (Median), Month | |
---|---|---|---|
ALL | 436 | 101 | 0.0 - 148.0 (22.0) |
DEL PEAK 34(16Q23.1) MUTATED | 59 | 17 | 0.9 - 53.0 (18.1) |
DEL PEAK 34(16Q23.1) WILD-TYPE | 377 | 84 | 0.0 - 148.0 (23.5) |
P value = 0.0249 (Wilcoxon-test), Q value = 0.11
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
DEL PEAK 35(17P12) MUTATED | 252 | 65.8 (12.6) |
DEL PEAK 35(17P12) WILD-TYPE | 195 | 68.3 (13.6) |
P value = 1e-05 (Fisher's exact test), Q value = 0.00039
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 35(17P12) MUTATED | 36 | 0 | 14 | 56 | 2 | 1 | 12 | 8 | 35 | 31 | 34 | 13 | 2 |
DEL PEAK 35(17P12) WILD-TYPE | 38 | 1 | 15 | 76 | 8 | 0 | 8 | 0 | 24 | 10 | 11 | 4 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00039
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 35(17P12) MUTATED | 122 | 71 | 59 |
DEL PEAK 35(17P12) WILD-TYPE | 140 | 34 | 23 |
P value = 0.000496 (Fisher's exact test), Q value = 0.008
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 35(17P12) MUTATED | 173 | 49 |
DEL PEAK 35(17P12) WILD-TYPE | 155 | 15 |
P value = 3.56e-07 (Fisher's exact test), Q value = 2.5e-05
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 35(17P12) MUTATED | 232 | 16 |
DEL PEAK 35(17P12) WILD-TYPE | 150 | 46 |
P value = 1.94e-06 (Wilcoxon-test), Q value = 0.00013
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 35(17P12) MUTATED | 238 | 2.8 (5.4) |
DEL PEAK 35(17P12) WILD-TYPE | 186 | 1.2 (2.6) |
P value = 0.0711 (logrank test), Q value = 0.23
nPatients | nDeath | Duration Range (Median), Month | |
---|---|---|---|
ALL | 436 | 101 | 0.0 - 148.0 (22.0) |
DEL PEAK 36(17Q24.3) MUTATED | 68 | 21 | 0.2 - 140.4 (23.3) |
DEL PEAK 36(17Q24.3) WILD-TYPE | 368 | 80 | 0.0 - 148.0 (22.0) |
P value = 0.00308 (Fisher's exact test), Q value = 0.027
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 36(17Q24.3) MUTATED | 10 | 0 | 4 | 10 | 0 | 0 | 3 | 2 | 7 | 12 | 10 | 7 | 1 |
DEL PEAK 36(17Q24.3) WILD-TYPE | 64 | 1 | 25 | 122 | 10 | 1 | 17 | 6 | 52 | 29 | 35 | 10 | 1 |
P value = 0.0019 (Fisher's exact test), Q value = 0.019
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 36(17Q24.3) MUTATED | 27 | 23 | 19 |
DEL PEAK 36(17Q24.3) WILD-TYPE | 235 | 82 | 63 |
P value = 0.00317 (Fisher's exact test), Q value = 0.027
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 36(17Q24.3) MUTATED | 40 | 18 |
DEL PEAK 36(17Q24.3) WILD-TYPE | 288 | 46 |
P value = 7.89e-05 (Wilcoxon-test), Q value = 0.0021
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 36(17Q24.3) MUTATED | 65 | 3.0 (3.9) |
DEL PEAK 36(17Q24.3) WILD-TYPE | 359 | 1.9 (4.5) |
P value = 0.0517 (Wilcoxon-test), Q value = 0.18
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
DEL PEAK 37(18P11.31) MUTATED | 247 | 66.1 (12.1) |
DEL PEAK 37(18P11.31) WILD-TYPE | 200 | 67.9 (14.1) |
P value = 0.00019 (Fisher's exact test), Q value = 0.0042
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 37(18P11.31) MUTATED | 37 | 0 | 11 | 66 | 3 | 1 | 7 | 6 | 36 | 22 | 34 | 16 | 1 |
DEL PEAK 37(18P11.31) WILD-TYPE | 37 | 1 | 18 | 66 | 7 | 0 | 13 | 2 | 23 | 19 | 11 | 1 | 1 |
P value = 0.0105 (Fisher's exact test), Q value = 0.062
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 37(18P11.31) MUTATED | 130 | 70 | 47 |
DEL PEAK 37(18P11.31) WILD-TYPE | 132 | 35 | 35 |
P value = 1.47e-05 (Fisher's exact test), Q value = 0.00055
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 37(18P11.31) MUTATED | 165 | 51 |
DEL PEAK 37(18P11.31) WILD-TYPE | 163 | 13 |
P value = 2.97e-11 (Fisher's exact test), Q value = 1.3e-08
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 37(18P11.31) MUTATED | 233 | 10 |
DEL PEAK 37(18P11.31) WILD-TYPE | 149 | 52 |
P value = 0.0304 (Wilcoxon-test), Q value = 0.13
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 37(18P11.31) MUTATED | 234 | 2.2 (4.0) |
DEL PEAK 37(18P11.31) WILD-TYPE | 190 | 2.0 (4.9) |
P value = 0.0258 (Wilcoxon-test), Q value = 0.12
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
DEL PEAK 38(18Q12.2) MUTATED | 272 | 66.0 (12.4) |
DEL PEAK 38(18Q12.2) WILD-TYPE | 175 | 68.3 (14.0) |
P value = 0.00122 (Fisher's exact test), Q value = 0.013
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 38(18Q12.2) MUTATED | 38 | 0 | 16 | 70 | 3 | 1 | 11 | 8 | 37 | 28 | 36 | 14 | 1 |
DEL PEAK 38(18Q12.2) WILD-TYPE | 36 | 1 | 13 | 62 | 7 | 0 | 9 | 0 | 22 | 13 | 9 | 3 | 1 |
P value = 0.0011 (Fisher's exact test), Q value = 0.013
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 38(18Q12.2) MUTATED | 140 | 74 | 58 |
DEL PEAK 38(18Q12.2) WILD-TYPE | 122 | 31 | 24 |
P value = 0.00114 (Fisher's exact test), Q value = 0.013
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 38(18Q12.2) MUTATED | 191 | 51 |
DEL PEAK 38(18Q12.2) WILD-TYPE | 137 | 13 |
P value = 9.05e-11 (Fisher's exact test), Q value = 2.3e-08
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 38(18Q12.2) MUTATED | 255 | 14 |
DEL PEAK 38(18Q12.2) WILD-TYPE | 127 | 48 |
P value = 0.00262 (Wilcoxon-test), Q value = 0.024
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 38(18Q12.2) MUTATED | 258 | 2.3 (4.6) |
DEL PEAK 38(18Q12.2) WILD-TYPE | 166 | 1.7 (4.2) |
P value = 0.0488 (Wilcoxon-test), Q value = 0.18
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 447 | 66.9 (13.1) |
DEL PEAK 39(18Q21.2) MUTATED | 286 | 66.2 (12.3) |
DEL PEAK 39(18Q21.2) WILD-TYPE | 161 | 68.3 (14.2) |
P value = 8e-05 (Fisher's exact test), Q value = 0.0021
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 39(18Q21.2) MUTATED | 40 | 0 | 17 | 72 | 3 | 1 | 11 | 8 | 40 | 31 | 38 | 15 | 2 |
DEL PEAK 39(18Q21.2) WILD-TYPE | 34 | 1 | 12 | 60 | 7 | 0 | 9 | 0 | 19 | 10 | 7 | 2 | 0 |
P value = 0.00011 (Fisher's exact test), Q value = 0.0027
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 39(18Q21.2) MUTATED | 145 | 78 | 63 |
DEL PEAK 39(18Q21.2) WILD-TYPE | 117 | 27 | 19 |
P value = 8.66e-05 (Fisher's exact test), Q value = 0.0022
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 39(18Q21.2) MUTATED | 199 | 55 |
DEL PEAK 39(18Q21.2) WILD-TYPE | 129 | 9 |
P value = 0.0393 (Fisher's exact test), Q value = 0.16
nPatients | FEMALE | MALE |
---|---|---|
ALL | 213 | 236 |
DEL PEAK 39(18Q21.2) MUTATED | 125 | 161 |
DEL PEAK 39(18Q21.2) WILD-TYPE | 88 | 75 |
P value = 1.07e-10 (Fisher's exact test), Q value = 2.3e-08
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 39(18Q21.2) MUTATED | 267 | 16 |
DEL PEAK 39(18Q21.2) WILD-TYPE | 115 | 46 |
P value = 8.37e-05 (Wilcoxon-test), Q value = 0.0022
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 39(18Q21.2) MUTATED | 272 | 2.4 (4.6) |
DEL PEAK 39(18Q21.2) WILD-TYPE | 152 | 1.6 (4.1) |
P value = 4e-05 (Fisher's exact test), Q value = 0.0013
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 40(18Q22.1) MUTATED | 40 | 0 | 18 | 72 | 3 | 1 | 10 | 8 | 39 | 31 | 38 | 15 | 2 |
DEL PEAK 40(18Q22.1) WILD-TYPE | 34 | 1 | 11 | 60 | 7 | 0 | 10 | 0 | 20 | 10 | 7 | 2 | 0 |
P value = 0.00019 (Fisher's exact test), Q value = 0.0042
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 40(18Q22.1) MUTATED | 146 | 76 | 63 |
DEL PEAK 40(18Q22.1) WILD-TYPE | 116 | 29 | 19 |
P value = 5.17e-05 (Fisher's exact test), Q value = 0.0015
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 40(18Q22.1) MUTATED | 198 | 55 |
DEL PEAK 40(18Q22.1) WILD-TYPE | 130 | 9 |
P value = 0.031 (Fisher's exact test), Q value = 0.13
nPatients | FEMALE | MALE |
---|---|---|
ALL | 213 | 236 |
DEL PEAK 40(18Q22.1) MUTATED | 124 | 161 |
DEL PEAK 40(18Q22.1) WILD-TYPE | 89 | 75 |
P value = 1.29e-11 (Fisher's exact test), Q value = 1.1e-08
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 40(18Q22.1) MUTATED | 267 | 15 |
DEL PEAK 40(18Q22.1) WILD-TYPE | 115 | 47 |
P value = 0.000261 (Wilcoxon-test), Q value = 0.0053
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 40(18Q22.1) MUTATED | 271 | 2.4 (4.6) |
DEL PEAK 40(18Q22.1) WILD-TYPE | 153 | 1.6 (4.1) |
P value = 0.00228 (Fisher's exact test), Q value = 0.022
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 41(19P13.3) MUTATED | 8 | 0 | 1 | 11 | 1 | 0 | 5 | 2 | 5 | 13 | 10 | 4 | 1 |
DEL PEAK 41(19P13.3) WILD-TYPE | 66 | 1 | 28 | 121 | 9 | 1 | 15 | 6 | 54 | 28 | 35 | 13 | 1 |
P value = 6e-05 (Fisher's exact test), Q value = 0.0017
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 41(19P13.3) MUTATED | 23 | 16 | 24 |
DEL PEAK 41(19P13.3) WILD-TYPE | 239 | 89 | 58 |
P value = 0.0285 (Fisher's exact test), Q value = 0.13
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 41(19P13.3) MUTATED | 40 | 15 |
DEL PEAK 41(19P13.3) WILD-TYPE | 288 | 49 |
P value = 0.0351 (Fisher's exact test), Q value = 0.14
nPatients | R0 | R1 | R2 | RX |
---|---|---|---|---|
ALL | 323 | 4 | 25 | 25 |
DEL PEAK 41(19P13.3) MUTATED | 41 | 2 | 7 | 3 |
DEL PEAK 41(19P13.3) WILD-TYPE | 282 | 2 | 18 | 22 |
P value = 5.08e-06 (Wilcoxon-test), Q value = 0.00027
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 41(19P13.3) MUTATED | 60 | 4.2 (5.9) |
DEL PEAK 41(19P13.3) WILD-TYPE | 364 | 1.7 (4.1) |
P value = 0.0217 (Fisher's exact test), Q value = 0.1
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 42(20P12.1) MUTATED | 79 | 5 |
DEL PEAK 42(20P12.1) WILD-TYPE | 303 | 57 |
P value = 0.0436 (Fisher's exact test), Q value = 0.17
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 43(21Q11.2) MUTATED | 73 | 32 | 35 |
DEL PEAK 43(21Q11.2) WILD-TYPE | 189 | 73 | 47 |
P value = 0.00061 (Fisher's exact test), Q value = 0.0087
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 43(21Q11.2) MUTATED | 129 | 8 |
DEL PEAK 43(21Q11.2) WILD-TYPE | 253 | 54 |
P value = 0.0555 (Wilcoxon-test), Q value = 0.19
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 43(21Q11.2) MUTATED | 133 | 2.9 (6.2) |
DEL PEAK 43(21Q11.2) WILD-TYPE | 291 | 1.7 (3.3) |
P value = 0.00101 (Fisher's exact test), Q value = 0.013
nPatients | STAGE I | STAGE IA | STAGE II | STAGE IIA | STAGE IIB | STAGE IIC | STAGE III | STAGE IIIA | STAGE IIIB | STAGE IIIC | STAGE IV | STAGE IVA | STAGE IVB |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ALL | 74 | 1 | 29 | 132 | 10 | 1 | 20 | 8 | 59 | 41 | 45 | 17 | 2 |
DEL PEAK 44(22Q13.32) MUTATED | 19 | 0 | 8 | 40 | 1 | 0 | 6 | 6 | 18 | 22 | 25 | 8 | 0 |
DEL PEAK 44(22Q13.32) WILD-TYPE | 55 | 1 | 21 | 92 | 9 | 1 | 14 | 2 | 41 | 19 | 20 | 9 | 2 |
P value = 5e-04 (Fisher's exact test), Q value = 0.008
nPatients | N0 | N1 | N2 |
---|---|---|---|
ALL | 262 | 105 | 82 |
DEL PEAK 44(22Q13.32) MUTATED | 73 | 45 | 40 |
DEL PEAK 44(22Q13.32) WILD-TYPE | 189 | 60 | 42 |
P value = 0.00399 (Fisher's exact test), Q value = 0.031
nPatients | 0 | 1 |
---|---|---|
ALL | 328 | 64 |
DEL PEAK 44(22Q13.32) MUTATED | 105 | 33 |
DEL PEAK 44(22Q13.32) WILD-TYPE | 223 | 31 |
P value = 0.00152 (Fisher's exact test), Q value = 0.016
nPatients | COLON ADENOCARCINOMA | COLON MUCINOUS ADENOCARCINOMA |
---|---|---|
ALL | 382 | 62 |
DEL PEAK 44(22Q13.32) MUTATED | 146 | 11 |
DEL PEAK 44(22Q13.32) WILD-TYPE | 236 | 51 |
P value = 0.000214 (Wilcoxon-test), Q value = 0.0046
nPatients | Mean (Std.Dev) | |
---|---|---|
ALL | 424 | 2.1 (4.4) |
DEL PEAK 44(22Q13.32) MUTATED | 149 | 2.8 (4.9) |
DEL PEAK 44(22Q13.32) WILD-TYPE | 275 | 1.7 (4.2) |
-
Copy number data file = all_lesions.txt from GISTIC pipeline
-
Processed Copy number data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/COAD-TP/22508739/transformed.cor.cli.txt
-
Clinical data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/Append_Data/COAD-TP/22506513/COAD-TP.merged_data.txt
-
Number of patients = 449
-
Number of significantly focal cnvs = 66
-
Number of selected clinical features = 13
-
Exclude genes that fewer than K tumors have mutations, K = 3
For survival clinical features, the Kaplan-Meier survival curves of tumors with and without gene mutations were plotted and the statistical significance P values were estimated by logrank test (Bland and Altman 2004) using the 'survdiff' function in R
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.