GS SIZE SOURCE ES NES NOM p-val FDR q-val FWER p-val Tag % Gene % Signal FDR (median) glob.p.val KEGG_OXIDATIVE_PHOSPHORYLATION 111 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OXIDATIVE_PHOSPHORYLATION 0.54157 1.5311 0.0874 0.87821 0.964 0.739 0.353 0.481 0.58587 0.283 KEGG_PYRIMIDINE_METABOLISM 98 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PYRIMIDINE_METABOLISM 0.34491 1.5812 0.01709 1 0.928 0.49 0.316 0.337 0.60168 0.323 KEGG_ARGININE_AND_PROLINE_METABOLISM 53 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ARGININE_AND_PROLINE_METABOLISM 0.6292 1.8181 0 1 0.451 0.491 0.185 0.401 0 0.31 KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM 44 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM 0.44937 1.7342 0.02083 1 0.677 0.432 0.266 0.318 0.64803 0.38 KEGG_PYRUVATE_METABOLISM 38 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PYRUVATE_METABOLISM 0.5191 1.7176 0.01762 1 0.715 0.5 0.259 0.371 0.52234 0.323 PID_INTEGRIN3_PATHWAY 42 http://www.broadinstitute.org/gsea/msigdb/cards/PID_INTEGRIN3_PATHWAY 0.65128 1.5573 0.03077 0.95635 0.955 0.548 0.146 0.469 0.59303 0.303 PID_AVB3_INTEGRIN_PATHWAY 74 http://www.broadinstitute.org/gsea/msigdb/cards/PID_AVB3_INTEGRIN_PATHWAY 0.577 1.5291 0.05508 0.84324 0.964 0.446 0.149 0.381 0.56806 0.274 PID_SYNDECAN_1_PATHWAY 46 http://www.broadinstitute.org/gsea/msigdb/cards/PID_SYNDECAN_1_PATHWAY 0.71382 1.6584 0.01268 1 0.823 0.63 0.149 0.538 0.59383 0.338 PID_INTEGRIN_A4B1_PATHWAY 32 http://www.broadinstitute.org/gsea/msigdb/cards/PID_INTEGRIN_A4B1_PATHWAY 0.50546 1.5955 0.04322 1 0.908 0.312 0.172 0.259 0.63673 0.339 REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION 72 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION 0.41332 1.568 0.07555 1 0.943 0.639 0.364 0.408 0.62103 0.326 REACTOME_DEGRADATION_OF_THE_EXTRACELLULAR_MATRIX 27 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_DEGRADATION_OF_THE_EXTRACELLULAR_MATRIX 0.69713 1.5915 0.02046 1 0.911 0.667 0.148 0.569 0.59383 0.321 REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION 85 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION 0.64249 1.6251 0.0131 1 0.876 0.624 0.149 0.533 0.60671 0.329 REACTOME_COLLAGEN_FORMATION 58 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_COLLAGEN_FORMATION 0.62697 1.5164 0.02778 0.86427 0.965 0.672 0.174 0.557 0.59644 0.286 REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM 47 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM 0.58813 1.6484 0.01188 1 0.839 0.447 0.146 0.383 0.55058 0.315 REACTOME_HS_GAG_BIOSYNTHESIS 27 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_HS_GAG_BIOSYNTHESIS 0.59822 1.544 0.009009 0.85815 0.959 0.444 0.146 0.38 0.54694 0.274 REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM 48 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM 0.57288 1.6022 0.01277 1 0.9 0.375 0.146 0.321 0.67652 0.362 REACTOME_GLYCOSAMINOGLYCAN_METABOLISM 105 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_GLYCOSAMINOGLYCAN_METABOLISM 0.49623 1.5614 0.03049 1 0.952 0.324 0.146 0.278 0.61109 0.322 REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS 25 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_A_TETRASACCHARIDE_LINKER_SEQUENCE_IS_REQUIRED_FOR_GAG_SYNTHESIS 0.66312 1.5468 0.02658 0.89507 0.959 0.48 0.0966 0.434 0.56322 0.285 REACTOME_METABOLISM_OF_NUCLEOTIDES 71 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_METABOLISM_OF_NUCLEOTIDES 0.43032 1.7041 0.004695 1 0.742 0.535 0.31 0.371 0.46302 0.28 REACTOME_METABOLISM_OF_CARBOHYDRATES 226 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_METABOLISM_OF_CARBOHYDRATES 0.38862 1.5512 0.02553 0.92804 0.957 0.354 0.221 0.279 0.58964 0.296