Hybridization REF p difference q subclass Composite Element REF p difference q subclass SERPINE1|PAI-1 0.00276829614406329 0.908597550521008 0.025332169817839 2 MS4A1|CD20 0.0014030659363114 0.837227996701681 0.0179022094902426 2 CCNB1|CYCLIN_B1 0.00177157281413859 0.75911904339916 0.0179022094902426 2 FN1|FIBRONECTIN 0.0035772815356658 0.756643527462185 0.0298625241238189 2 TFRC|TFRC 0.000896145929000374 0.658956547428571 0.0153711593533279 2 MSH6|MSH6 1.08400067524305e-05 0.656677991672269 0.00104064064823333 2 PARP1|PARP1 0.00453813511480793 0.57690165262605 0.0348528776817249 2 GAPDH|GAPDH 0.000691182340517132 0.567647827747899 0.0153711593533279 2 CHEK1|CHK1 0.00277070607382614 0.518133738605042 0.025332169817839 2 SQSTM1|P62-LCK-LIGAND 0.000121911362972898 0.508609569714286 0.00468139633815928 2 ASNS|ASNS 0.000960697459582992 0.490395035163866 0.0153711593533279 2 BCL2L11|BIM 0.0459101016144088 0.46216125612605 0.133022859916975 2 EIF4G1|EIF4G 0.00112593764495746 0.425063971747899 0.0166292329101409 2 SYK|SYK 0.0243969104030642 0.388320255159664 0.090777551480441 2 EEF2K|EEF2K 0.0384765386820743 0.341035586084034 0.121106482409152 2 XRCC5|KU80 0.00756761676711626 0.287904015163866 0.046040441659666 2 PCNA|PCNA 8.87225544764754e-05 0.281740950441176 0.00425868261487082 2 BRAF|B-RAF 0.0106870631592448 0.273365349302521 0.0569976701826389 2 YBX1|YB-1 0.00848197021949408 0.270210358659664 0.0465296652040818 2 EEF2|EEF2 0.00530431646010214 0.258900835710084 0.0377195837162819 2 CHEK2|CHK2 0.0383874001628538 0.226667435180672 0.121106482409152 2 PIK3R1|PI3K-P85 0.025683992616682 0.218869293016807 0.0929273803224263 2 TSC1|TSC1 0.0221082333905062 0.212562171058824 0.086628179815861 2 MSH2|MSH2 0.0232303393479538 0.176537131537815 0.0892045030961426 2 PRKAA1|AMPK_PT172 0.0458081695277251 0.176318966109244 0.133022859916975 2 BIRC2 |CIAP 0.0261358257156824 0.175308348336134 0.0929273803224263 2 BAP1|BAP1-C-4 0.0163505851930263 0.174544989277311 0.0721018047991951 2 CLDN7|CLAUDIN-7 0.0148114758548672 0.172599404903361 0.0693610576618171 2 NRG1|HEREGULIN 0.0293411766422683 0.142637847079832 0.100330506526079 2 C12ORF5|TIGAR 0.0300547970265894 0.131722084991597 0.100330506526079 2 EIF4E|EIF4E 0.0154315028733932 0.127023511655462 0.0705440131355118 2 PGR|PR 0.00158530358246568 0.107324848508403 0.0179022094902426 2 IRS1|IRS1 0.0464194354918609 0.10566570884874 0.133022859916975 2 ADAR|ADAR1 0.0180773792439117 0.0960915169495798 0.0738480173368308 2 ARHI|ARHI 0.00767340694327767 -0.0754743412731092 0.046040441659666 2 COPS5|JAB1 0.0141701489512343 -0.0884912982268908 0.0693610576618171 2 AKT1S1|PRAS40_PT246 0.0398325715398151 -0.0922775504831933 0.123352479607169 2 CTNNB1|ALPHA-CATENIN 0.0303081738464198 -0.116323789991597 0.100330506526079 2 YBX1|YB-1_PS102 0.0170860963793256 -0.122715396815126 0.0721018047991951 2 ARAF|A-RAF_PS299 0.0172743907331405 -0.127816422394958 0.0721018047991951 2 AKT1 AKT2 AKT3|AKT 0.0444363812889781 -0.134669635995798 0.133022859916975 2 MAPK1|ERK2 0.00695930683550231 -0.14982791489916 0.046040441659666 2 ESR1|ER-ALPHA 0.00146871172935336 -0.186378708264706 0.0179022094902426 2 ANXA1|ANNEXIN_1 0.0289336371891112 -0.187131929819328 0.100330506526079 2 BAD|BAD_PS112 0.0421922629690997 -0.18740811142437 0.12858594428678 2 GATA3|GATA3 0.00452615869543611 -0.204357048222689 0.0348528776817249 2 MYH9|MYOSIN-IIA_PS1943 0.0245855868592861 -0.205861071256303 0.090777551480441 2 TSC2|TUBERIN_PT1462 0.0313397537724959 -0.214420368777311 0.101986995327444 2 EGFR|EGFR_PY1068 0.00629236432747053 -0.217690257777311 0.0431476411026551 2 INPP4B|INPP4B 3.55690477011785e-06 -0.221825027827731 0.000682925715862627 2 FRAP1|MTOR_PS2448 0.00530050756695657 -0.262925214831933 0.0377195837162819 2 PKC|PKC-PAN_BETAII_PS660 0.00840116884978025 -0.32191929434874 0.0465296652040818 2 YAP1|YAP_PS127 0.0194503546840484 -0.364309182785714 0.0778014187361936 2 AKT1 AKT2 AKT3|AKT_PT308 0.000309028128117302 -0.378878078130252 0.00847620008550314 2 RPS6|S6_PS240_S244 0.0167998947306097 -0.386189431067227 0.0721018047991951 2 MAPK1 MAPK3|MAPK_PT202_Y204 0.0145401899909495 -0.466134223504202 0.0693610576618171 2 CDH1|E-CADHERIN 0.00842295145017913 -0.490889381802521 0.0465296652040818 2 GSK3A GSK3B|GSK3_PS9 0.00170578644115671 -0.5475580185 0.0179022094902426 2 EIF4EBP1|4E-BP1_PT37_T46 0.000919836118463377 -0.581713501268908 0.0153711593533279 2 SRC|SRC_PY527 0.0123424598682337 -0.58772258162605 0.0634512078781157 2 PDCD4|PDCD4 0.0125580515592104 -0.616692138369748 0.0634512078781157 2 MAPK14|P38_PT180_Y182 0.00291750311145545 -0.617610241453781 0.0254618453363385 2 GSK3A GSK3B|GSK3-ALPHA-BETA_PS21_S9 0.000260758835318706 -0.640720694487395 0.00834428273019859 2 RPS6|S6_PS235_S236 0.00158096399715852 -0.691377910827731 0.0179022094902426 2 AKT1 AKT2 AKT3|AKT_PS473 4.61085780727998e-05 -0.700416056491597 0.00295094899665919 2 CDKN1A|P21 0.00739520665139651 -0.701193354672269 0.046040441659666 2 SRC|SRC_PY416 0.000750886043856314 -0.76012228455042 0.0153711593533279 2 PDCD4|PDCD4 2.26317242509045e-06 1.03804110955263 0.000144843035205789 3 SRC|SRC_PY416 0.000523139752702452 0.863191141535088 0.0055973118793632 3 RPS6|S6_PS235_S236 9.57821242691757e-05 0.833659167767544 0.00229877098246022 3 MAPK14|P38_PT180_Y182 0.000301822142012808 0.689360041872807 0.00437667661957125 3 AKT1 AKT2 AKT3|AKT_PS473 0.000474808469994743 0.671850854035088 0.0055973118793632 3 GSK3A GSK3B|GSK3-ALPHA-BETA_PS21_S9 8.42049985462575e-05 0.66726526127193 0.00229877098246022 3 SRC|SRC_PY527 0.00336804246918582 0.600884649692982 0.0208601340026993 3 GSK3A GSK3B|GSK3_PS9 0.000205116384629531 0.594981838320175 0.003938234584887 3 EIF4EBP1|4E-BP1_PT37_T46 0.00031913267017707 0.548786833298246 0.00437667661957125 3 PKC|PKC-PAN_BETAII_PS660 1.26825062696196e-06 0.52797487454386 0.000121752060188348 3 RB1|RB_PS807_S811 0.0141645018644976 0.518075541324561 0.0575863755517376 3 RPS6|S6_PS240_S244 0.00117510932643671 0.507253423214912 0.00973130451232016 3 FRAP1|MTOR_PS2448 5.51019221370732e-09 0.455211039013158 1.05795690503181e-06 3 TSC2|TUBERIN_PT1462 0.000178226402519374 0.392602524890351 0.00380216325374665 3 PRKCA |PKC-ALPHA_PS657 0.0143965938879344 0.371942640328947 0.0575863755517376 3 EGFR|EGFR_PY1068 0.00591150455138068 0.284786621438597 0.0315280242740303 3 PRKCD|PKC-DELTA_PS664 0.00212315178428069 0.282636284688596 0.0145587550922104 3 BAD|BAD_PS112 0.00228352507739913 0.236443791070175 0.0151185108572632 3 CHEK1|CHK1_PS345 0.0104920535157753 0.21518566722807 0.0491335189031429 3 ARAF|A-RAF_PS299 0.00158906149560043 0.197948992324561 0.0117346079675109 3 FRAP1|MTOR 0.0253137636858798 0.162683411372807 0.0907377993168057 3 INPP4B|INPP4B 0.00349536669405278 0.15645412872807 0.0209722001643167 3 FOXO3|FOXO3A_PS318_S321 0.0082840032635789 0.136683493122807 0.0407827852976192 3 AKT1S1|PRAS40_PT246 0.0118758013156943 0.117470365140351 0.0518216784684842 3 YBX1|YB-1_PS102 0.0293405551341715 0.111393784214912 0.102425210650199 3 JUN|C-JUN_PS73 0.0127909612390767 0.0942347794385965 0.0545747679533939 3 SHC1|SHC_PY317 0.0408260659129994 0.0879070328684211 0.131315372087477 3 FOXO3|FOXO3A 0.0470671498098769 -0.0651724728552631 0.141201449429631 3 MET|C-MET_PY1235 0.0358054964150891 -0.0737719856052632 0.122761701994591 3 PGR|PR 0.0184158097522886 -0.0750871725877193 0.0679968360084502 3 MRE11A|MRE11 0.0410360537773366 -0.0777405337105263 0.131315372087477 3 EIF4E|EIF4E 0.016039575196504 -0.115360600921053 0.0628489477087504 3 SMAD3|SMAD3 0.0385011336742408 -0.122056145578947 0.127452028714728 3 NRAS|N-RAS 0.00671344531160631 -0.124185991127193 0.0348373378332003 3 EIF4EBP1|4E-BP1_PT70 0.0115273626889197 -0.127192085473684 0.0514710147970368 3 C12ORF5|TIGAR 0.0169069740617101 -0.131335832140351 0.0649227803969668 3 ERBB2|HER2_PY1248 0.00118117725749394 -0.134646550109649 0.00973130451232016 3 IRS1|IRS1 0.00121641306404002 -0.14262274979386 0.00973130451232016 3 NOTCH1|NOTCH1 0.0104220809980002 -0.144751930609649 0.0491335189031429 3 RAB11A RAB11B|RAB11 0.000719611586587053 -0.147656354942982 0.0065793059345102 3 ERRFI1|MIG-6 0.000264312182830991 -0.150647651153509 0.00422899492529586 3 NRG1|HEREGULIN 0.00470051013161573 -0.158460175026316 0.0257856555791491 3 YAP1|YAP 0.0137326251368734 -0.166248447368421 0.0573187831799933 3 COL6A1|COLLAGEN_VI 0.0255200060578516 -0.167745849280702 0.0907377993168057 3 STK11|LKB1 1.60089545433401e-05 -0.169260690732456 0.00061474385446426 3 WWTR1|TAZ 0.000245362350341578 -0.170207478802632 0.00422899492529586 3 BID|BID 0.000544843694039403 -0.181779920824561 0.0055973118793632 3 PCNA|PCNA 0.00127365761831834 -0.214082925390351 0.00978169050868485 3 EEF2|EEF2 0.00432792073860838 -0.219812740337719 0.0244400229944944 3 BAX|BAX 0.0108434719415239 -0.222556291890351 0.0495701574469664 3 CCND1|CYCLIN_D1 0.0436212128616674 -0.235943389258772 0.137299555236724 3 STMN1|STATHMIN 5.44308000162477e-05 -0.246782992548246 0.00174178560051993 3 EIF4EBP1|4E-BP1 0.00310484620123885 -0.257370564092105 0.0198710156879286 3 BCL2L1|BCL-XL 0.000583053320767 -0.271758204166667 0.0055973118793632 3 IGFBP2|IGFBP2 0.0375739201997373 -0.279071933578947 0.126564783830694 3 SQSTM1|P62-LCK-LIGAND 0.00724461076281544 -0.373922074596491 0.0366043491173833 3 CAV1|CAVEOLIN-1 0.0454443767594313 -0.396120139157895 0.138497148219219 3 YBX1|YB-1 5.45627574916631e-06 -0.41157208622807 0.000261901235959983 3 GAPDH|GAPDH 0.0040720504788914 -0.43847230145614 0.0236919300590045 3 MS4A1|CD20 0.0446132440721895 -0.48560927252193 0.138157142933232 3 TFRC|TFRC 0.00182394856829238 -0.658657952951754 0.0129703009300791 3 MYH11|MYH11 0.0177130269221377 -0.756549268644737 0.0666843366480478 3 SERPINE1|PAI-1 0.000572336478592539 -0.970958419745614 0.0055973118793632 3 FN1|FIBRONECTIN 0.000438615611773367 -1.06558992888596 0.0055973118793632 3