GS SIZE SOURCE ES NES NOM p-val FDR q-val FWER p-val Tag % Gene % Signal FDR (median) glob.p.val KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM 44 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM 0.52644 1.7695 0.02605 1 0.641 0.523 0.297 0.368 0.83511 0.466 KEGG_P53_SIGNALING_PATHWAY 67 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_P53_SIGNALING_PATHWAY 0.53003 1.6694 0.01566 0.78302 0.83 0.254 0.132 0.221 0.40606 0.252 KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY 45 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY 0.5846 1.6713 0.01818 0.9122 0.828 0.333 0.162 0.28 0.47576 0.283 PID_AURORA_B_PATHWAY 39 http://www.broadinstitute.org/gsea/msigdb/cards/PID_AURORA_B_PATHWAY 0.74256 1.7061 0.004049 1 0.764 0.385 0.083 0.353 0.61408 0.363 PID_E2F_PATHWAY 69 http://www.broadinstitute.org/gsea/msigdb/cards/PID_E2F_PATHWAY 0.54413 1.6707 0.02484 0.83924 0.83 0.246 0.14 0.213 0.43672 0.263 PID_INTEGRIN2_PATHWAY 29 http://www.broadinstitute.org/gsea/msigdb/cards/PID_INTEGRIN2_PATHWAY 0.68705 1.6393 0.01411 0.74027 0.873 0.621 0.157 0.524 0.41414 0.245 REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION 72 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ANTIGEN_PROCESSING_CROSS_PRESENTATION 0.47134 1.652 0.04921 0.76644 0.851 0.597 0.361 0.383 0.42351 0.248 REACTOME_ORC1_REMOVAL_FROM_CHROMATIN 59 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ORC1_REMOVAL_FROM_CHROMATIN 0.50919 1.6934 0.06175 0.94952 0.786 0.576 0.361 0.37 0.4616 0.288 REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS 61 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS 0.42067 1.6635 0.05482 0.75568 0.836 0.508 0.361 0.326 0.39383 0.24 REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION 89 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MHC_CLASS_II_ANTIGEN_PRESENTATION 0.44985 1.6304 0.03441 0.69964 0.879 0.393 0.248 0.297 0.38744 0.226 REACTOME_REGULATION_OF_APOPTOSIS 56 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_REGULATION_OF_APOPTOSIS 0.45128 1.6861 0.05085 0.89889 0.807 0.536 0.361 0.344 0.44226 0.273 REACTOME_CELL_CYCLE_CHECKPOINTS 105 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CELL_CYCLE_CHECKPOINTS 0.52146 1.6487 0.04444 0.73712 0.855 0.543 0.338 0.362 0.40933 0.24 REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE 53 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE 0.48444 1.6297 0.06374 0.66817 0.88 0.755 0.443 0.422 0.37059 0.217 REACTOME_METABOLISM_OF_NUCLEOTIDES 72 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_METABOLISM_OF_NUCLEOTIDES 0.4808 1.7142 0.01403 1 0.751 0.417 0.255 0.312 0.6851 0.392 REACTOME_SYNTHESIS_OF_DNA 84 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SYNTHESIS_OF_DNA 0.52592 1.7229 0.04118 1 0.74 0.619 0.361 0.398 0.753 0.428 REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX 57 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX 0.52598 1.6393 0.07186 0.69939 0.873 0.614 0.361 0.394 0.39113 0.232 REACTOME_HIV_INFECTION 193 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_HIV_INFECTION 0.32129 1.6948 0.06262 1 0.783 0.394 0.361 0.254 0.59126 0.344 REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS 120 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS 0.40833 1.8161 0.04589 1 0.526 0.467 0.349 0.306 0.98129 0.497 REACTOME_INNATE_IMMUNE_SYSTEM 216 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_INNATE_IMMUNE_SYSTEM 0.49313 1.7463 0.01782 1 0.687 0.264 0.148 0.228 0.72854 0.425 REACTOME_S_PHASE 100 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_S_PHASE 0.50733 1.6946 0.04752 1 0.783 0.61 0.361 0.392 0.51736 0.307