Clinical Features	CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
amp_2p23.2	45 (16%)	243	9.9999e-06	5.38e-05	2e-05	9.82e-05	0.76231	0.805	0.04867	0.077	0.45914	0.527	0.95228	0.977	0.03175	0.0538	0.17945	0.239	0.65415	0.715	0.54078	0.606
amp_2q32.1	53 (18%)	235	9.9999e-06	5.38e-05	2e-05	9.82e-05	0.83716	0.871	0.11608	0.163	0.14338	0.196	0.93705	0.965	0.03417	0.0569	0.3514	0.43	1	1	0.30724	0.382
amp_3q26.31	101 (35%)	187	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.23772	0.303	0.00151	0.00448	9.9999e-06	5.38e-05	0.01208	0.0242	0.00255	0.00693	0.00344	0.00838	0.55696	0.621	0.00484	0.0111
amp_5q35.3	37 (13%)	251	8.9999e-05	0.00036	0.00028	0.00102	0.53498	0.602	0.61782	0.681	0.00142	0.00428	9.9999e-06	5.38e-05	0.43598	0.507	0.04118	0.0666	0.42249	0.495	0.12592	0.173
amp_7p11.2	175 (61%)	113	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.01128	0.0229	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	7.9999e-05	0.000329	0.00041	0.00145	9.9999e-06	5.38e-05	3e-05	0.000135
amp_7q31.2	177 (61%)	111	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.02035	0.0368	3e-05	0.000135	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.00067999	0.00227	0.00058999	0.00201	9.9999e-06	5.38e-05	3e-05	0.000135
amp_17q23.2	199 (69%)	89	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.00346	0.00838	8.9999e-05	0.00036	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.0088199	0.0182	0.0077299	0.0162	2e-04	0.000757	0.00036	0.00129
del_1p36.31	54 (19%)	234	2e-05	9.82e-05	9.9999e-06	5.38e-05	0.41637	0.49	0.089419	0.133	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.00489	0.0111	0.87414	0.907	0.053069	0.083	0.0027	0.00703
del_2p12	8 (3%)	280	0.26506	0.336	0.00188	0.00537	0.17037	0.23	0.6708	0.728	0.03737	0.0615	0.11023	0.157	0.0094399	0.0193	0.26987	0.34	0.69665	0.748	1	1
del_2q22.1	10 (3%)	278	0.03587	0.0594	0.00152	0.00448	0.0062199	0.0138	0.71689	0.766	3e-05	0.000135	0.0072899	0.0154	0.01347	0.0262	1	1	0.36754	0.444	0.41095	0.488
del_2q37.3	12 (4%)	276	0.0081599	0.0169	0.00156	0.00455	0.00054999	0.0019	0.21379	0.277	0.02461	0.0433	0.00241	0.00667	0.01744	0.0321	0.29057	0.363	0.057569	0.0881	0.44419	0.512
del_3p22.1	25 (9%)	263	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.38458	0.46	0.02959	0.0508	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.01435	0.0277	0.04549	0.0724	0.050269	0.0791	0.00266	0.00703
del_4q34.3	32 (11%)	256	0.00116	0.00357	9.9999e-06	5.38e-05	0.27513	0.345	0.0128	0.0251	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.055189	0.0857	0.46813	0.533	0.02687	0.0467	0.00347	0.00838
del_5p15.33	13 (5%)	275	0.092479	0.136	0.0066699	0.0144	0.68	0.735	0.078279	0.118	0.01518	0.0285	0.00088999	0.0029	0.36692	0.444	0.22696	0.292	0.34041	0.418	0.57677	0.641
del_5q35.2	11 (4%)	277	0.04033	0.066	9.9999e-06	5.38e-05	0.03365	0.0564	0.00021	0.000784	0.00027	0.000995	9.9999e-06	5.38e-05	0.079699	0.119	0.00076999	0.00254	0.0032	0.008	0.0183	0.0335
del_6p12.3	26 (9%)	262	0.01472	0.028	9.9999e-06	5.38e-05	1	1	0.23704	0.303	2e-05	9.82e-05	0.00099999	0.00318	0.46142	0.527	0.59375	0.657	0.39314	0.468	0.18867	0.249
del_6q25.3	32 (11%)	256	0.01187	0.0239	9.9999e-06	5.38e-05	0.69736	0.748	0.01883	0.0342	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.02785	0.0481	1	1	0.069579	0.105	0.055449	0.0857
del_9p21.3	40 (14%)	248	0.00269	0.00703	9.9999e-06	5.38e-05	0.3679	0.444	0.00112	0.00348	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.01246	0.0246	0.0124	0.0246	0.00111	0.00348	5.9999e-05	0.000255
del_10q21.1	19 (7%)	269	0.11966	0.166	0.00016	0.000614	0.76181	0.805	0.0422	0.0679	9.9999e-06	5.38e-05	0.00089999	0.0029	0.02308	0.0414	0.79435	0.833	0.04464	0.0714	0.0073299	0.0154
del_11q22.3	31 (11%)	257	0.1853	0.246	0.00472	0.0109	0.63924	0.702	0.10181	0.148	5e-05	0.000215	0.00243	0.00667	0.11183	0.158	0.42929	0.501	0.0067199	0.0144	0.00271	0.00703
del_11q23.3	29 (10%)	259	0.21073	0.274	0.00047	0.00164	0.33771	0.417	0.04103	0.0666	9.9999e-05	0.000394	0.00159	0.00459	0.03187	0.0538	0.37088	0.446	0.01479	0.028	0.0057299	0.0128
del_14q11.2	51 (18%)	237	0.00016	0.000614	0.00119	0.00362	0.063549	0.0967	0.00447	0.0104	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.11839	0.166	0.95949	0.981	0.055709	0.0857	0.01481	0.028
del_14q24.2	50 (17%)	238	2e-05	9.82e-05	4e-05	0.000178	0.02373	0.0423	0.00271	0.00703	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.02433	0.0431	1	1	0.01527	0.0285	0.00357	0.00854
del_15q13.3	35 (12%)	253	0.00282	0.00724	3e-05	0.000135	0.11957	0.166	0.03121	0.0533	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	0.10286	0.148	0.10821	0.155	0.092609	0.136	0.01745	0.0321
del_16q24.2	12 (4%)	276	0.17105	0.23	0.00306	0.00772	0.22366	0.289	0.095349	0.139	0.0057299	0.0128	0.0021	0.00594	0.51311	0.579	0.3135	0.388	0.02594	0.0454	0.17201	0.23
del_19p13.3	23 (8%)	265	9.9999e-06	5.38e-05	0.003	0.00764	0.89114	0.921	0.81014	0.846	0.00396	0.0094	0.00442	0.0104	0.12296	0.17	0.19521	0.257	0.15575	0.212	0.10629	0.153
del_19q13.42	19 (7%)	269	9.9999e-06	5.38e-05	0.00067999	0.00227	0.79235	0.833	0.41487	0.49	7.9999e-05	0.000329	0.00344	0.00838	0.0065799	0.0143	0.47247	0.536	0.66372	0.723	0.21015	0.274
del_22q12.2	63 (22%)	225	0.00231	0.00647	9.9999e-06	5.38e-05	0.44087	0.51	0.0063699	0.014	9.9999e-06	5.38e-05	9.9999e-06	5.38e-05	5e-05	0.000215	0.7492	0.798	0.095589	0.139	0.0064599	0.0141