Clinical Features	CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nMutated (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
SETD2	16 (6%)	266	0.17654	0.661	9.9999e-06	0.0026	0.082649	0.482	0.059739	0.458	0.01612	0.234	0.00387	0.118	0.04824	0.418	0.0041	0.118	0.76982	1	0.8604	1
NF2	10 (4%)	272	0.23582	0.786	0.00498	0.129	0.67975	1	0.76486	1	0.17784	0.661	0.11231	0.551	0.78951	1	0.85136	1	0.87248	1	0.74509	1
ZNF814	9 (3%)	273	0.90152	1	0.62129	0.998	1	1	0.64131	0.998	0.73216	1	1	1	0.11646	0.551	0.29303	0.824	1	1	0.77367	1
MET	21 (7%)	261	0.62893	0.998	0.00039	0.0253	0.083429	0.482	0.061039	0.458	0.0097399	0.185	0.00091999	0.0478	0.03019	0.357	0.44638	0.913	0.85013	1	0.01617	0.234
NEFH	6 (2%)	276	0.0093199	0.185	0.13577	0.591	0.56367	0.987	0.46051	0.916	0.32457	0.824	0.63831	0.998	0.63519	0.998	0.7701	1	0.22224	0.755	0.38319	0.853
KRAS	5 (2%)	277	0.30581	0.824	0.0099599	0.185	NA	NA	NA	NA	0.48608	0.927	0.0178	0.244	0.8293	1	0.52368	0.959	0.37342	0.853	0.56558	0.987
CUL3	10 (4%)	272	0.04636	0.418	0.066209	0.458	0.47204	0.916	0.50718	0.938	0.21739	0.754	0.16416	0.657	0.11347	0.551	0.18712	0.666	0.17696	0.661	0.49947	0.934
PCF11	11 (4%)	271	0.32997	0.824	0.31597	0.824	0.34195	0.831	0.03664	0.381	0.11561	0.551	0.32254	0.824	0.88116	1	0.39039	0.853	0.77372	1	0.37645	0.853
BCLAF1	6 (2%)	276	0.88866	1	0.40253	0.862	0.63852	0.998	0.81305	1	0.84926	1	0.86837	1	0.50879	0.938	1	1	1	1	1	1
PAM	3 (1%)	279	0.78146	1	0.1092	0.551	0.062539	0.458	0.68967	1	0.70488	1	1	1	0.26579	0.824	0.0209	0.272	NA	NA	NA	NA
SMARCB1	6 (2%)	276	0.26627	0.824	0.014	0.227	1	1	0.54599	0.972	0.10622	0.551	0.14322	0.601	0.2993	0.824	0.3306	0.824	0.03597	0.381	0.12176	0.556
KDM6A	10 (4%)	272	0.44406	0.913	0.067869	0.458	1	1	0.79757	1	0.4645	0.916	0.28789	0.824	0.085849	0.485	0.551	0.975	0.30984	0.824	0.58927	0.998
AR	13 (5%)	269	0.38066	0.853	0.33569	0.824	1	1	0.85911	1	0.75521	1	0.24145	0.795	0.61176	0.998	0.72508	1	0.60765	0.998	0.60061	0.998
TP53	7 (2%)	275	0.27194	0.824	0.071519	0.458	0.26671	0.824	1	1	0.13942	0.594	0.01372	0.227	0.44956	0.913	0.72194	1	0.4685	0.916	0.12185	0.556
KRTAP4-5	5 (2%)	277	0.7244	1	0.70466	1	0.83405	1	0.26997	0.824	0.96155	1	1	1	0.13631	0.591	0.73963	1	0.69478	1	0.38611	0.853
BRAF	4 (1%)	278	0.44306	0.913	0.65963	1	1	1	0.60895	0.998	0.93804	1	1	1	0.4284	0.898	0.46989	0.916	0.31625	0.824	0.12887	0.578
KIAA0922	5 (2%)	277	0.76664	1	0.95904	1	NA	NA	NA	NA	0.28062	0.824	0.59249	0.998	0.71758	1	0.61471	0.998	0.10965	0.551	0.28803	0.824
KRT2	5 (2%)	277	0.069519	0.458	1	1	1	1	1	1	0.62246	0.998	1	1	0.77533	1	0.73882	1	0.31666	0.824	0.53525	0.972
ALMS1	8 (3%)	274	0.41366	0.874	0.94748	1	0.89551	1	0.30804	0.824	0.94609	1	0.79161	1	0.89335	1	1	1	1	1	0.68053	1
GXYLT1	4 (1%)	278	0.2737	0.824	0.67104	1	0.48169	0.927	0.46786	0.916	1	1	1	1	0.16791	0.66	0.68931	1	0.54154	0.972	0.02932	0.357
ATP1B1	7 (2%)	275	0.15979	0.649	0.60558	0.998	0.85216	1	0.60839	0.998	0.054079	0.454	0.18189	0.662	0.20234	0.711	0.7221	1	0.04691	0.418	0.85149	1
PBRM1	11 (4%)	271	0.83845	1	0.00227	0.0843	0.22349	0.755	0.17002	0.66	0.079659	0.482	0.073239	0.458	0.04104	0.395	0.00186	0.0806	0.36496	0.853	0.3796	0.853
PTEN	7 (2%)	275	0.88854	1	0.18335	0.662	1	1	0.74425	1	0.33591	0.824	0.40467	0.862	0.2648	0.824	0.49488	0.932	0.86862	1	0.10421	0.551
SAV1	6 (2%)	276	0.03866	0.387	0.0058399	0.138	0.37637	0.853	0.38398	0.853	0.00029	0.0251	0.00019	0.0247	0.29567	0.824	0.15702	0.648	0.32867	0.824	0.3876	0.853
CALCR	3 (1%)	279	1	1	0.74458	1	0.63089	0.998	0.88436	1	0.28314	0.824	0.071149	0.458	0.71221	1	0.48831	0.927	0.77685	1	1	1
IGSF3	4 (1%)	278	0.54233	0.972	0.60437	0.998	0.092189	0.51	0.073999	0.458	0.37319	0.853	0.39462	0.855	0.96915	1	0.068339	0.458	0.03232	0.365	1	1