name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-2K-A9WE-01A-11D-A382-10	64	62	2	47	3.125000e-02	0	coding only	34834024	13	42	3.731983e-07	1.205718e-06
TCGA-2Z-A9J1-01A-11D-A382-10	110	109	1	85	9.090909e-03	0	coding only	34834024	22	79	6.315664e-07	2.267898e-06
TCGA-2Z-A9J2-01A-11D-A382-10	91	89	2	70	2.197802e-02	0	coding only	34834024	17	63	4.880286e-07	1.808577e-06
TCGA-2Z-A9J3-01A-12D-A382-10	148	144	4	116	2.702703e-02	0	coding only	34834024	25	109	7.176891e-07	3.129125e-06
TCGA-2Z-A9J5-01A-21D-A382-10	103	102	1	82	9.708738e-03	0	coding only	34834024	18	74	5.167362e-07	2.124360e-06
TCGA-2Z-A9J6-01A-11D-A382-10	55	54	1	44	1.818182e-02	0	coding only	34834024	10	41	2.870756e-07	1.177010e-06
TCGA-2Z-A9J7-01A-11D-A382-10	47	46	1	33	2.127660e-02	0	coding only	34834024	12	32	3.444908e-07	9.186421e-07
TCGA-2Z-A9J8-01A-11D-A42J-10	32	30	2	26	6.250000e-02	0	coding only	34834024	4	24	1.148303e-07	6.889816e-07
TCGA-2Z-A9JD-01A-11D-A42J-10	116	108	8	81	6.896552e-02	1	exome+100bp flanks	34834024	25	74	7.176891e-07	2.124360e-06
TCGA-2Z-A9JE-01A-11D-A42J-10	92	91	1	74	1.086957e-02	0	coding only	34834024	15	70	4.306135e-07	2.009530e-06
TCGA-2Z-A9JG-01A-11D-A42J-10	83	83	0	66	0	0	coding only	34834024	16	60	4.593210e-07	1.722454e-06
TCGA-2Z-A9JI-01A-11D-A42J-10	13	12	1	10	7.692308e-02	0	coding only	34834024	2	9	5.741513e-08	2.583681e-07
TCGA-2Z-A9JJ-01A-11D-A42J-10	24	24	0	21	0	0	coding only	34834024	3	21	8.612269e-08	6.028589e-07
TCGA-2Z-A9JK-01A-11D-A42J-10	87	87	0	74	0	0	coding only	34834024	13	70	3.731983e-07	2.009530e-06
TCGA-2Z-A9JL-01A-11D-A42J-10	97	94	3	76	3.092784e-02	0	coding only	34834024	17	69	4.880286e-07	1.980822e-06
TCGA-2Z-A9JM-01A-12D-A42J-10	69	66	3	50	4.347826e-02	0	coding only	34834024	14	45	4.019059e-07	1.291840e-06
TCGA-2Z-A9JN-01A-21D-A42J-10	30	29	1	20	3.333333e-02	0	coding only	34834024	9	17	2.583681e-07	4.880286e-07
TCGA-2Z-A9JO-01A-11D-A42J-10	41	40	1	28	2.439024e-02	0	coding only	34834024	11	25	3.157832e-07	7.176891e-07
TCGA-2Z-A9JP-01A-11D-A42J-10	63	59	4	49	6.349206e-02	0	coding only	34834024	10	47	2.870756e-07	1.349256e-06
TCGA-2Z-A9JQ-01A-11D-A42J-10	89	87	2	61	2.247191e-02	0	coding only	34834024	25	59	7.176891e-07	1.693746e-06
TCGA-2Z-A9JR-01A-12D-A42J-10	55	55	0	44	0	0	coding only	34834024	11	41	3.157832e-07	1.177010e-06
TCGA-2Z-A9JS-01A-21D-A42J-10	121	121	0	95	0	0	coding only	34834024	24	94	6.889816e-07	2.698511e-06
TCGA-2Z-A9JT-01A-11D-A42J-10	83	82	1	66	1.204819e-02	0	coding only	34834024	14	62	4.019059e-07	1.779869e-06
TCGA-4A-A93W-01A-11D-A36X-10	104	101	3	78	2.884615e-02	0	coding only	34834024	23	75	6.602740e-07	2.153067e-06
TCGA-4A-A93X-01A-11D-A36X-10	102	100	2	84	1.960784e-02	0	coding only	34834024	16	74	4.593210e-07	2.124360e-06
TCGA-4A-A93Y-01A-11D-A36X-10	26	25	1	20	3.846154e-02	0	coding only	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-5P-A9JU-01A-11D-A42J-10	87	84	3	69	3.448276e-02	0	coding only	34834024	14	66	4.019059e-07	1.894699e-06
TCGA-5P-A9JV-01A-12D-A42J-10	59	58	1	44	1.694915e-02	0	coding only	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-5P-A9JW-01A-11D-A42J-10	86	85	1	70	1.162791e-02	0	coding only	34834024	11	64	3.157832e-07	1.837284e-06
TCGA-5P-A9JY-01A-11D-A42J-10	127	125	2	104	1.574803e-02	0	coding only	34834024	20	97	5.741513e-07	2.784634e-06
TCGA-5P-A9JZ-01A-11D-A42J-10	53	53	0	43	0	0	coding only	34834024	10	40	2.870756e-07	1.148303e-06
TCGA-5P-A9K0-01A-11D-A42J-10	95	93	2	73	2.105263e-02	0	coding only	34834024	19	68	5.454437e-07	1.952114e-06
TCGA-5P-A9K2-01A-11D-A42J-10	81	81	0	64	0	0	coding only	34834024	16	62	4.593210e-07	1.779869e-06
TCGA-5P-A9K3-01A-11D-A42J-10	73	72	1	58	1.369863e-02	0	coding only	34834024	14	57	4.019059e-07	1.636331e-06
TCGA-5P-A9K6-01A-11D-A42J-10	56	53	3	40	5.357143e-02	0	coding only	34834024	10	31	2.870756e-07	8.899345e-07
TCGA-5P-A9K8-01A-11D-A42J-10	21	21	0	16	0	0	coding only	34834024	5	12	1.435378e-07	3.444908e-07
TCGA-5P-A9KA-01A-11D-A42J-10	102	100	2	82	1.960784e-02	0	coding only	34834024	17	76	4.880286e-07	2.181775e-06
TCGA-5P-A9KC-01A-11D-A42J-10	90	88	2	74	2.222222e-02	0	coding only	34834024	14	68	4.019059e-07	1.952114e-06
TCGA-5P-A9KE-01A-11D-A42J-10	88	86	2	64	2.272727e-02	0	coding only	34834024	22	61	6.315664e-07	1.751161e-06
TCGA-5P-A9KH-01A-11D-A42J-10	25	24	1	17	4.000000e-02	0	coding only	34834024	7	16	2.009530e-07	4.593210e-07
TCGA-A4-7286-01A-11D-2136-08	40	39	1	30	2.500000e-02	0	coding only	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-A4-7287-01A-11D-2136-08	40	40	0	30	0	0	coding only	34834024	10	29	2.870756e-07	8.325194e-07
TCGA-A4-7288-01A-11D-2136-08	75	74	1	58	1.333333e-02	0	coding only	34834024	14	53	4.019059e-07	1.521501e-06
TCGA-A4-7583-01A-11D-2136-08	76	76	0	56	0	0	coding only	34834024	18	53	5.167362e-07	1.521501e-06
TCGA-A4-7584-01A-11D-2136-08	77	73	4	57	5.194805e-02	0	coding only	34834024	14	52	4.019059e-07	1.492793e-06
TCGA-A4-7585-01A-11D-2136-08	68	67	1	57	1.470588e-02	0	coding only	34834024	9	54	2.583681e-07	1.550208e-06
TCGA-A4-7732-01A-11D-2136-08	47	47	0	43	0	0	coding only	34834024	4	39	1.148303e-07	1.119595e-06
TCGA-A4-7734-01A-11D-2136-08	51	51	0	39	0	0	coding only	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-A4-7828-01A-11D-2136-08	31	30	1	27	3.225806e-02	0	coding only	34834024	3	25	8.612269e-08	7.176891e-07
TCGA-A4-7915-01A-11D-2201-08	29	29	0	26	0	0	coding only	34834024	3	23	8.612269e-08	6.602740e-07
TCGA-A4-7996-01A-11D-2201-08	87	86	1	69	1.149425e-02	0	coding only	34834024	16	67	4.593210e-07	1.923407e-06
TCGA-A4-7997-01A-11D-2201-08	72	71	1	56	1.388889e-02	0	coding only	34834024	15	52	4.306135e-07	1.492793e-06
TCGA-A4-8098-01A-11D-2396-08	95	94	1	69	1.052632e-02	0	coding only	34834024	23	64	6.602740e-07	1.837284e-06
TCGA-A4-8310-01A-11D-2396-08	77	76	1	55	1.298701e-02	0	coding only	34834024	21	51	6.028589e-07	1.464086e-06
TCGA-A4-8311-01A-11D-2396-08	62	61	1	41	1.612903e-02	0	coding only	34834024	20	40	5.741513e-07	1.148303e-06
TCGA-A4-8312-01A-11D-2396-08	22	22	0	14	0	0	coding only	34834024	6	12	1.722454e-07	3.444908e-07
TCGA-A4-8515-01A-11D-2396-08	57	56	1	46	1.754386e-02	0	coding only	34834024	10	46	2.870756e-07	1.320548e-06
TCGA-A4-8517-01A-11D-2396-08	79	76	3	52	3.797468e-02	0	coding only	34834024	24	49	6.889816e-07	1.406671e-06
TCGA-A4-8518-01A-11D-2396-08	22	21	1	15	4.545455e-02	0	coding only	34834024	5	13	1.435378e-07	3.731983e-07
TCGA-A4-8630-01A-11D-2396-08	53	52	1	40	1.886792e-02	0	coding only	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-A4-A48D-01A-11D-A25F-10	97	95	2	73	2.061856e-02	0	coding only	34834024	20	68	5.741513e-07	1.952114e-06
TCGA-A4-A4ZT-01A-11D-A26P-10	60	59	1	51	1.666667e-02	0	coding only	34834024	8	44	2.296605e-07	1.263133e-06
TCGA-A4-A57E-01A-11D-A26P-10	89	88	1	68	1.123596e-02	0	coding only	34834024	17	60	4.880286e-07	1.722454e-06
TCGA-A4-A5DU-01A-11D-A28G-10	32	31	1	26	3.125000e-02	0	coding only	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-A4-A5XZ-01A-11D-A31X-10	40	38	2	29	5.000000e-02	0	coding only	34834024	9	25	2.583681e-07	7.176891e-07
TCGA-A4-A5Y0-01A-11D-A31X-10	57	55	2	50	3.508772e-02	0	coding only	34834024	5	48	1.435378e-07	1.377963e-06
TCGA-A4-A5Y1-01A-11D-A28G-10	78	77	1	59	1.282051e-02	0	coding only	34834024	16	51	4.593210e-07	1.464086e-06
TCGA-A4-A6HP-01A-11D-A31X-10	91	90	1	69	1.098901e-02	0	coding only	34834024	21	63	6.028589e-07	1.808577e-06
TCGA-A4-A772-01A-11D-A33Q-10	47	46	1	33	2.127660e-02	0	coding only	34834024	12	32	3.444908e-07	9.186421e-07
TCGA-A4-A7UZ-01A-12D-A34Z-10	59	59	0	49	0	0	coding only	34834024	9	46	2.583681e-07	1.320548e-06
TCGA-AL-3466-01A-01D-1252-08	30	30	0	23	0	0	coding only	34834024	4	22	1.148303e-07	6.315664e-07
TCGA-AL-3467-01A-01D-1252-08	14	14	0	13	0	0	coding only	34834024	0	12	0	3.444908e-07
TCGA-AL-3468-01A-01D-1252-08	87	84	3	67	3.448276e-02	0	coding only	34834024	16	61	4.593210e-07	1.751161e-06
TCGA-AL-3472-01A-01D-1252-08	54	53	1	44	1.851852e-02	0	coding only	34834024	9	44	2.583681e-07	1.263133e-06
TCGA-AL-3473-01A-01D-1252-08	43	42	1	35	2.325581e-02	0	coding only	34834024	7	32	2.009530e-07	9.186421e-07
TCGA-AL-7173-01A-11D-2136-08	65	63	2	53	3.076923e-02	0	coding only	34834024	7	53	2.009530e-07	1.521501e-06
TCGA-AL-A5DJ-01A-11D-A26P-10	38	38	0	26	0	0	coding only	34834024	11	22	3.157832e-07	6.315664e-07
TCGA-AT-A5NU-01A-11D-A28G-10	77	76	1	61	1.298701e-02	0	coding only	34834024	11	54	3.157832e-07	1.550208e-06
TCGA-B1-5398-01A-02D-1589-08	99	96	3	72	3.030303e-02	0	coding only	34834024	23	71	6.602740e-07	2.038237e-06
TCGA-B1-7332-01A-11D-2136-08	45	45	0	34	0	0	coding only	34834024	10	30	2.870756e-07	8.612269e-07
TCGA-B1-A47M-01A-11D-A25F-10	104	102	2	81	1.923077e-02	0	coding only	34834024	21	75	6.028589e-07	2.153067e-06
TCGA-B1-A47N-01A-11D-A25F-10	39	38	1	25	2.564103e-02	0	coding only	34834024	12	24	3.444908e-07	6.889816e-07
TCGA-B1-A47O-01A-11D-A25F-10	29	28	1	20	3.448276e-02	0	coding only	34834024	8	17	2.296605e-07	4.880286e-07
TCGA-B1-A654-01A-11D-A31X-10	48	45	3	39	6.250000e-02	0	coding only	34834024	6	39	1.722454e-07	1.119595e-06
TCGA-B1-A655-01A-11D-A31Z-10	95	91	4	65	4.210526e-02	0	coding only	34834024	24	60	6.889816e-07	1.722454e-06
TCGA-B1-A656-01A-11D-A31X-10	100	99	1	80	1.000000e-02	0	coding only	34834024	19	77	5.454437e-07	2.210482e-06
TCGA-B1-A657-01A-11D-A31X-10	85	83	2	66	2.352941e-02	0	coding only	34834024	15	59	4.306135e-07	1.693746e-06
TCGA-B3-3925-01A-01D-1458-08	56	54	2	42	3.571429e-02	0	coding only	34834024	12	41	3.444908e-07	1.177010e-06
TCGA-B3-3926-01A-01D-1252-08	8	8	0	8	0	0	coding only	34834024	0	8	0	2.296605e-07
TCGA-B3-4103-01A-01D-1458-08	48	47	1	36	2.083333e-02	0	coding only	34834024	10	35	2.870756e-07	1.004765e-06
TCGA-B3-4104-01A-01D-1458-08	77	77	0	59	0	0	coding only	34834024	16	55	4.593210e-07	1.578916e-06
TCGA-B3-8121-01A-21D-2396-08	28	28	0	24	0	0	coding only	34834024	4	24	1.148303e-07	6.889816e-07
TCGA-B3-A6W5-01A-12D-A33Q-10	37	36	1	28	2.702703e-02	0	coding only	34834024	8	24	2.296605e-07	6.889816e-07
TCGA-B9-4113-01A-01D-1252-08	67	65	2	51	2.985075e-02	0	coding only	34834024	14	50	4.019059e-07	1.435378e-06
TCGA-B9-4114-01A-01D-1252-08	79	76	3	58	3.797468e-02	0	coding only	34834024	18	53	5.167362e-07	1.521501e-06
TCGA-B9-4115-01A-01D-1252-08	47	47	0	35	0	0	coding only	34834024	12	31	3.444908e-07	8.899345e-07
TCGA-B9-4116-01A-01D-1252-08	76	74	2	58	2.631579e-02	0	coding only	34834024	15	55	4.306135e-07	1.578916e-06
TCGA-B9-4117-01A-01D-1252-08	63	62	1	50	1.587302e-02	0	coding only	34834024	10	50	2.870756e-07	1.435378e-06
TCGA-B9-4617-01A-01D-1252-08	50	49	1	39	2.000000e-02	0	coding only	34834024	8	37	2.296605e-07	1.062180e-06
TCGA-B9-5155-01A-01D-1589-08	104	103	1	82	9.615385e-03	0	coding only	34834024	19	74	5.454437e-07	2.124360e-06
TCGA-B9-5156-01A-01D-1589-08	76	74	2	57	2.631579e-02	0	coding only	34834024	16	55	4.593210e-07	1.578916e-06
TCGA-B9-7268-01A-11D-2136-08	56	55	1	37	1.785714e-02	0	coding only	34834024	16	37	4.593210e-07	1.062180e-06
TCGA-B9-A44B-01A-11D-A25F-10	130	129	1	106	7.692308e-03	0	coding only	34834024	22	98	6.315664e-07	2.813341e-06
TCGA-B9-A5W7-01A-11D-A31X-10	9	9	0	8	0	0	coding only	34834024	1	8	2.870756e-08	2.296605e-07
TCGA-B9-A5W8-01A-11D-A28G-10	48	46	2	29	4.166667e-02	0	coding only	34834024	17	28	4.880286e-07	8.038118e-07
TCGA-B9-A5W9-01A-11D-A28G-10	52	50	2	36	3.846154e-02	0	coding only	34834024	9	30	2.583681e-07	8.612269e-07
TCGA-B9-A69E-01A-11D-A31X-10	78	77	1	66	1.282051e-02	0	coding only	34834024	11	58	3.157832e-07	1.665039e-06
TCGA-B9-A8YH-01A-11D-A36X-10	105	105	0	80	0	0	coding only	34834024	22	77	6.315664e-07	2.210482e-06
TCGA-B9-A8YI-01A-21D-A36X-10	119	118	1	95	8.403361e-03	0	coding only	34834024	21	88	6.028589e-07	2.526266e-06
TCGA-BQ-5875-01A-11D-1589-08	68	67	1	54	1.470588e-02	0	coding only	34834024	13	53	3.731983e-07	1.521501e-06
TCGA-BQ-5876-01A-11D-1589-08	61	60	1	46	1.639344e-02	0	coding only	34834024	14	45	4.019059e-07	1.291840e-06
TCGA-BQ-5877-01A-11D-1589-08	79	79	0	66	0	0	coding only	34834024	13	60	3.731983e-07	1.722454e-06
TCGA-BQ-5878-01A-11D-1589-08	93	91	2	69	2.150538e-02	0	coding only	34834024	22	64	6.315664e-07	1.837284e-06
TCGA-BQ-5879-01A-11D-1589-08	23	23	0	15	0	0	coding only	34834024	8	14	2.296605e-07	4.019059e-07
TCGA-BQ-5880-01A-11D-1589-08	41	40	1	32	2.439024e-02	0	coding only	34834024	8	31	2.296605e-07	8.899345e-07
TCGA-BQ-5881-01A-11D-1589-08	33	32	1	27	3.030303e-02	0	coding only	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-BQ-5882-01A-11D-1589-08	60	60	0	45	0	0	coding only	34834024	14	41	4.019059e-07	1.177010e-06
TCGA-BQ-5883-01A-11D-1589-08	23	23	0	19	0	0	coding only	34834024	3	17	8.612269e-08	4.880286e-07
TCGA-BQ-5884-01A-11D-1589-08	41	39	2	31	4.878049e-02	0	coding only	34834024	8	31	2.296605e-07	8.899345e-07
TCGA-BQ-5885-01A-11D-1589-08	85	83	2	69	2.352941e-02	0	coding only	34834024	14	66	4.019059e-07	1.894699e-06
TCGA-BQ-5886-01A-11D-1589-08	57	56	1	49	1.754386e-02	0	coding only	34834024	6	46	1.722454e-07	1.320548e-06
TCGA-BQ-5887-01A-11D-1961-08	16	16	0	12	0	0	coding only	34834024	4	11	1.148303e-07	3.157832e-07
TCGA-BQ-5888-01A-11D-1589-08	23	22	1	17	4.347826e-02	0	coding only	34834024	5	14	1.435378e-07	4.019059e-07
TCGA-BQ-5889-01A-11D-1589-08	50	49	1	37	2.000000e-02	0	coding only	34834024	11	37	3.157832e-07	1.062180e-06
TCGA-BQ-5890-01A-11D-1589-08	76	73	3	58	3.947368e-02	0	coding only	34834024	14	54	4.019059e-07	1.550208e-06
TCGA-BQ-5891-01A-11D-1589-08	28	25	3	13	1.071429e-01	0	coding only	34834024	11	12	3.157832e-07	3.444908e-07
TCGA-BQ-5892-01A-11D-1589-08	62	61	1	55	1.612903e-02	0	coding only	34834024	5	50	1.435378e-07	1.435378e-06
TCGA-BQ-5893-01A-11D-1589-08	47	47	0	34	0	0	coding only	34834024	12	31	3.444908e-07	8.899345e-07
TCGA-BQ-5894-01A-11D-1589-08	20	20	0	17	0	0	coding only	34834024	3	15	8.612269e-08	4.306135e-07
TCGA-BQ-7044-01A-11D-1961-08	63	62	1	51	1.587302e-02	0	coding only	34834024	11	50	3.157832e-07	1.435378e-06
TCGA-BQ-7045-01A-31D-1961-08	69	68	1	52	1.449275e-02	0	coding only	34834024	16	52	4.593210e-07	1.492793e-06
TCGA-BQ-7046-01A-11D-1961-08	27	27	0	23	0	0	coding only	34834024	4	20	1.148303e-07	5.741513e-07
TCGA-BQ-7048-01A-11D-1961-08	52	52	0	39	0	0	coding only	34834024	12	37	3.444908e-07	1.062180e-06
TCGA-BQ-7049-01A-11D-1961-08	25	24	1	18	4.000000e-02	0	coding only	34834024	6	16	1.722454e-07	4.593210e-07
TCGA-BQ-7050-01A-11D-1961-08	23	23	0	18	0	0	coding only	34834024	5	18	1.435378e-07	5.167362e-07
TCGA-BQ-7051-01A-12D-1961-08	78	77	1	52	1.282051e-02	0	coding only	34834024	23	51	6.602740e-07	1.464086e-06
TCGA-BQ-7053-01A-11D-1961-08	43	40	3	30	6.976744e-02	0	coding only	34834024	10	29	2.870756e-07	8.325194e-07
TCGA-BQ-7055-01A-11D-1961-08	6	6	0	5	0	0	coding only	34834024	1	5	2.870756e-08	1.435378e-07
TCGA-BQ-7056-01A-11D-1961-08	33	30	3	25	9.090909e-02	0	coding only	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-BQ-7058-01A-11D-1961-08	54	53	1	45	1.851852e-02	0	coding only	34834024	7	45	2.009530e-07	1.291840e-06
TCGA-BQ-7059-01A-11D-1961-08	63	62	1	48	1.587302e-02	0	coding only	34834024	14	47	4.019059e-07	1.349256e-06
TCGA-BQ-7060-01A-11D-1961-08	28	28	0	21	0	0	coding only	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-BQ-7061-01A-11D-1961-08	67	67	0	55	0	0	coding only	34834024	12	53	3.444908e-07	1.521501e-06
TCGA-BQ-7062-01A-11D-1961-08	38	38	0	31	0	0	coding only	34834024	7	28	2.009530e-07	8.038118e-07
TCGA-DW-5560-01A-01D-1589-08	27	27	0	22	0	0	coding only	34834024	5	20	1.435378e-07	5.741513e-07
TCGA-DW-5561-01A-01D-1589-08	41	41	0	31	0	0	coding only	34834024	10	29	2.870756e-07	8.325194e-07
TCGA-DW-7834-01A-11D-2136-08	52	50	2	38	3.846154e-02	0	coding only	34834024	12	34	3.444908e-07	9.760572e-07
TCGA-DW-7836-01A-11D-2136-08	42	41	1	32	2.380952e-02	0	coding only	34834024	9	31	2.583681e-07	8.899345e-07
TCGA-DW-7837-01A-11D-2136-08	39	39	0	32	0	0	coding only	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-DW-7838-01A-11D-2136-08	78	78	0	57	0	0	coding only	34834024	21	55	6.028589e-07	1.578916e-06
TCGA-DW-7839-01A-11D-2136-08	44	44	0	39	0	0	coding only	34834024	5	37	1.435378e-07	1.062180e-06
TCGA-DW-7840-01A-11D-2136-08	85	84	1	70	1.176471e-02	0	coding only	34834024	14	62	4.019059e-07	1.779869e-06
TCGA-DW-7841-01A-11D-2136-08	55	55	0	43	0	0	coding only	34834024	12	42	3.444908e-07	1.205718e-06
TCGA-DW-7842-01A-11D-2136-08	27	27	0	24	0	0	coding only	34834024	3	22	8.612269e-08	6.315664e-07
TCGA-DW-7963-01B-11D-A28G-10	30	29	1	19	3.333333e-02	0	coding only	34834024	10	17	2.870756e-07	4.880286e-07
TCGA-DZ-6131-01A-11D-1961-08	30	30	0	21	0	0	coding only	34834024	8	20	2.296605e-07	5.741513e-07
TCGA-DZ-6132-01A-11D-1961-08	93	92	1	82	1.075269e-02	0	coding only	34834024	9	79	2.583681e-07	2.267898e-06
TCGA-DZ-6133-01A-11D-1961-08	86	86	0	60	0	0	coding only	34834024	25	56	7.176891e-07	1.607624e-06
TCGA-DZ-6134-01A-11D-1961-08	32	32	0	23	0	0	coding only	34834024	9	23	2.583681e-07	6.602740e-07
TCGA-DZ-6135-01A-11D-1961-08	35	35	0	24	0	0	coding only	34834024	11	24	3.157832e-07	6.889816e-07
TCGA-EV-5901-01A-11D-1589-08	41	40	1	34	2.439024e-02	0	coding only	34834024	6	30	1.722454e-07	8.612269e-07
TCGA-EV-5902-01A-11D-1589-08	80	79	1	66	1.250000e-02	0	coding only	34834024	11	60	3.157832e-07	1.722454e-06
TCGA-EV-5903-01A-11D-1589-08	97	95	2	78	2.061856e-02	0	coding only	34834024	14	68	4.019059e-07	1.952114e-06
TCGA-F9-A4JJ-01A-11D-A25F-10	37	37	0	27	0	0	coding only	34834024	9	25	2.583681e-07	7.176891e-07
TCGA-F9-A7Q0-01A-11D-A35Z-10	18	16	2	11	1.111111e-01	0	coding only	34834024	5	9	1.435378e-07	2.583681e-07
TCGA-F9-A7VF-01A-11D-A33Q-10	77	76	1	57	1.298701e-02	0	coding only	34834024	19	51	5.454437e-07	1.464086e-06
TCGA-F9-A8NY-01A-11D-A35Z-10	47	46	1	33	2.127660e-02	0	coding only	34834024	12	31	3.444908e-07	8.899345e-07
TCGA-F9-A97G-01A-11D-A382-10	72	72	0	59	0	0	coding only	34834024	12	52	3.444908e-07	1.492793e-06
TCGA-G7-6789-01A-11D-1961-08	19	19	0	13	0	0	coding only	34834024	6	11	1.722454e-07	3.157832e-07
TCGA-G7-6790-01A-11D-1961-08	57	54	3	41	5.263158e-02	0	coding only	34834024	11	39	3.157832e-07	1.119595e-06
TCGA-G7-6792-01A-21D-1961-08	23	23	0	14	0	0	coding only	34834024	9	13	2.583681e-07	3.731983e-07
TCGA-G7-6793-01A-11D-1961-08	36	35	1	27	2.777778e-02	0	coding only	34834024	8	26	2.296605e-07	7.463967e-07
TCGA-G7-6795-01A-11D-1961-08	74	73	1	52	1.351351e-02	0	coding only	34834024	20	50	5.741513e-07	1.435378e-06
TCGA-G7-6796-01A-11D-1961-08	55	54	1	42	1.818182e-02	0	coding only	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-G7-6797-01A-11D-1961-08	76	76	0	52	0	0	coding only	34834024	23	49	6.602740e-07	1.406671e-06
TCGA-G7-7501-01A-11D-2201-08	39	39	0	30	0	0	coding only	34834024	7	27	2.009530e-07	7.751042e-07
TCGA-G7-7502-01A-11D-2201-08	65	64	1	49	1.538462e-02	0	coding only	34834024	14	45	4.019059e-07	1.291840e-06
TCGA-G7-A4TM-01A-11D-A31X-10	38	37	1	25	2.631579e-02	0	coding only	34834024	12	22	3.444908e-07	6.315664e-07
TCGA-G7-A8LB-01A-11D-A35Z-10	108	108	0	91	0	0	coding only	34834024	17	84	4.880286e-07	2.411435e-06
TCGA-G7-A8LC-01A-11D-A35Z-10	13	13	0	10	0	0	coding only	34834024	2	9	5.741513e-08	2.583681e-07
TCGA-G7-A8LD-01A-11D-A35Z-10	51	50	1	41	1.960784e-02	0	coding only	34834024	8	37	2.296605e-07	1.062180e-06
TCGA-G7-A8LE-01A-11D-A35Z-10	78	76	2	61	2.564103e-02	0	coding only	34834024	14	54	4.019059e-07	1.550208e-06
TCGA-GL-6846-01A-11D-1961-08	64	63	1	47	1.562500e-02	0	coding only	34834024	14	45	4.019059e-07	1.291840e-06
TCGA-GL-7773-01A-11D-2136-08	114	112	2	88	1.754386e-02	0	coding only	34834024	21	84	6.028589e-07	2.411435e-06
TCGA-GL-7966-01A-11D-2201-08	35	35	0	24	0	0	coding only	34834024	11	21	3.157832e-07	6.028589e-07
TCGA-GL-8500-01A-11D-2396-08	80	75	5	64	6.250000e-02	0	coding only	34834024	11	58	3.157832e-07	1.665039e-06
TCGA-GL-A4EM-01A-11D-A25F-10	66	66	0	53	0	0	coding only	34834024	11	47	3.157832e-07	1.349256e-06
TCGA-GL-A59R-01A-11D-A26P-10	81	80	1	65	1.234568e-02	0	coding only	34834024	14	60	4.019059e-07	1.722454e-06
TCGA-GL-A59T-01A-21D-A28G-10	77	75	2	55	2.597403e-02	0	coding only	34834024	18	50	5.167362e-07	1.435378e-06
TCGA-GL-A9DC-01A-11D-A36X-10	118	114	4	90	3.389831e-02	0	coding only	34834024	23	84	6.602740e-07	2.411435e-06
TCGA-GL-A9DD-01A-11D-A36X-10	111	110	1	86	9.009009e-03	0	coding only	34834024	19	78	5.454437e-07	2.239190e-06
TCGA-GL-A9DE-01A-11D-A36X-10	116	115	1	85	8.620690e-03	0	coding only	34834024	26	82	7.463967e-07	2.354020e-06
TCGA-HE-7128-01A-11D-1961-08	40	39	1	35	2.500000e-02	0	coding only	34834024	3	31	8.612269e-08	8.899345e-07
TCGA-HE-7129-01A-11D-1961-08	49	48	1	32	2.040816e-02	0	coding only	34834024	16	28	4.593210e-07	8.038118e-07
TCGA-HE-7130-01A-11D-1961-08	141	140	1	116	7.092199e-03	0	coding only	34834024	23	113	6.602740e-07	3.243955e-06
TCGA-HE-A5NF-01A-11D-A26P-10	69	69	0	58	0	0	coding only	34834024	11	56	3.157832e-07	1.607624e-06
TCGA-HE-A5NH-01A-11D-A26P-10	82	80	2	67	2.439024e-02	0	coding only	34834024	13	57	3.731983e-07	1.636331e-06
TCGA-HE-A5NI-01A-11D-A26P-10	105	105	0	79	0	0	coding only	34834024	25	74	7.176891e-07	2.124360e-06
TCGA-HE-A5NJ-01A-11D-A26P-10	74	73	1	56	1.351351e-02	0	coding only	34834024	16	52	4.593210e-07	1.492793e-06
TCGA-HE-A5NK-01A-11D-A26P-10	85	83	2	61	2.352941e-02	0	coding only	34834024	21	55	6.028589e-07	1.578916e-06
TCGA-HE-A5NL-01A-11D-A26P-10	73	72	1	54	1.369863e-02	0	coding only	34834024	16	49	4.593210e-07	1.406671e-06
TCGA-IA-A40U-01A-11D-A25F-10	49	45	4	38	8.163265e-02	0	coding only	34834024	6	36	1.722454e-07	1.033472e-06
TCGA-IA-A40X-01A-11D-A25F-10	30	27	3	23	1.000000e-01	0	coding only	34834024	4	21	1.148303e-07	6.028589e-07
TCGA-IA-A40Y-01A-11D-A25F-10	78	78	0	62	0	0	coding only	34834024	15	57	4.306135e-07	1.636331e-06
TCGA-IA-A83S-01A-11D-A34Z-10	134	131	3	105	2.238806e-02	0	coding only	34834024	22	101	6.315664e-07	2.899464e-06
TCGA-IA-A83T-01A-11D-A34Z-10	65	63	2	48	3.076923e-02	0	coding only	34834024	13	45	3.731983e-07	1.291840e-06
TCGA-IA-A83V-01A-11D-A34Z-10	52	47	5	33	9.615385e-02	0	coding only	34834024	14	31	4.019059e-07	8.899345e-07
TCGA-IA-A83W-01A-11D-A34Z-10	53	53	0	41	0	0	coding only	34834024	12	39	3.444908e-07	1.119595e-06
TCGA-IZ-8195-01A-31D-2396-08	73	72	1	56	1.369863e-02	0	coding only	34834024	14	51	4.019059e-07	1.464086e-06
TCGA-IZ-8196-01A-11D-2396-08	94	94	0	71	0	0	coding only	34834024	21	67	6.028589e-07	1.923407e-06
TCGA-IZ-A6M8-01A-11D-A31X-10	59	58	1	43	1.694915e-02	0	coding only	34834024	15	36	4.306135e-07	1.033472e-06
TCGA-IZ-A6M9-01A-11D-A31X-10	59	57	2	46	3.389831e-02	0	coding only	34834024	10	41	2.870756e-07	1.177010e-06
TCGA-J7-6720-01A-11D-2136-08	45	45	0	36	0	0	coding only	34834024	9	33	2.583681e-07	9.473496e-07
TCGA-J7-8537-01A-11D-2396-08	44	43	1	35	2.272727e-02	0	coding only	34834024	7	33	2.009530e-07	9.473496e-07
TCGA-J7-A8I2-01A-12D-A35Z-10	61	60	1	49	1.639344e-02	0	coding only	34834024	10	46	2.870756e-07	1.320548e-06
TCGA-KV-A6GD-01A-11D-A31X-10	66	66	0	49	0	0	coding only	34834024	16	44	4.593210e-07	1.263133e-06
TCGA-KV-A6GE-01A-11D-A31X-10	22	21	1	17	4.545455e-02	0	coding only	34834024	4	15	1.148303e-07	4.306135e-07
TCGA-KV-A74V-01A-11D-A33Q-10	20	19	1	18	5.000000e-02	0	coding only	34834024	1	17	2.870756e-08	4.880286e-07
TCGA-MH-A55W-01A-11D-A26P-10	79	78	1	63	1.265823e-02	0	coding only	34834024	14	58	4.019059e-07	1.665039e-06
TCGA-MH-A55Z-01A-11D-A26P-10	94	90	4	66	4.255319e-02	0	coding only	34834024	22	60	6.315664e-07	1.722454e-06
TCGA-MH-A560-01A-11D-A26P-10	52	51	1	40	1.923077e-02	0	coding only	34834024	11	39	3.157832e-07	1.119595e-06
TCGA-MH-A561-01A-11D-A26P-10	102	98	4	83	3.921569e-02	0	coding only	34834024	14	78	4.019059e-07	2.239190e-06
TCGA-MH-A562-01A-11D-A26P-10	65	65	0	47	0	0	coding only	34834024	17	43	4.880286e-07	1.234425e-06
TCGA-MH-A854-01A-11D-A34Z-10	115	113	2	92	1.739130e-02	0	coding only	34834024	18	86	5.167362e-07	2.468851e-06
TCGA-MH-A855-01A-11D-A34Z-10	33	30	3	22	9.090909e-02	0	coding only	34834024	7	20	2.009530e-07	5.741513e-07
TCGA-MH-A856-01A-11D-A34Z-10	68	68	0	50	0	0	coding only	34834024	16	49	4.593210e-07	1.406671e-06
TCGA-MH-A857-01A-11D-A34Z-10	28	25	3	20	1.071429e-01	0	coding only	34834024	4	16	1.148303e-07	4.593210e-07
TCGA-O9-A75Z-01A-11D-A33Q-10	22	22	0	14	0	0	coding only	34834024	8	14	2.296605e-07	4.019059e-07
TCGA-P4-A5E6-01A-11D-A28G-10	101	99	2	75	1.980198e-02	0	coding only	34834024	21	66	6.028589e-07	1.894699e-06
TCGA-P4-A5E7-01A-31D-A28G-10	91	90	1	69	1.098901e-02	0	coding only	34834024	19	59	5.454437e-07	1.693746e-06
TCGA-P4-A5E8-01A-11D-A28G-10	50	49	1	40	2.000000e-02	0	coding only	34834024	8	39	2.296605e-07	1.119595e-06
TCGA-P4-A5EA-01A-11D-A28G-10	59	59	0	52	0	0	coding only	34834024	6	49	1.722454e-07	1.406671e-06
TCGA-P4-A5EB-01A-11D-A28G-10	141	136	5	106	3.546099e-02	1	exome+100bp flanks	34834024	30	96	8.612269e-07	2.755926e-06
TCGA-P4-A5ED-01A-11D-A28G-10	21	21	0	16	0	0	coding only	34834024	5	16	1.435378e-07	4.593210e-07
TCGA-P4-AAVL-01A-11D-A42J-10	87	83	4	67	4.597701e-02	0	coding only	34834024	15	64	4.306135e-07	1.837284e-06
TCGA-P4-AAVM-01A-11D-A42J-10	56	55	1	35	1.785714e-02	0	coding only	34834024	19	35	5.454437e-07	1.004765e-06
TCGA-PJ-A5Z8-01A-11D-A28G-10	69	67	2	53	2.898551e-02	0	coding only	34834024	13	49	3.731983e-07	1.406671e-06
TCGA-PJ-A5Z9-01A-11D-A28G-10	59	54	5	39	8.474576e-02	0	coding only	34834024	14	36	4.019059e-07	1.033472e-06
TCGA-PJ-A8JU-01A-11D-A35Z-10	109	105	4	82	3.669725e-02	0	coding only	34834024	21	76	6.028589e-07	2.181775e-06
TCGA-Q2-A5QZ-01A-11D-A28G-10	115	111	4	82	3.478261e-02	0	coding only	34834024	25	72	7.176891e-07	2.066945e-06
TCGA-SX-A71R-01A-12D-A33Q-10	41	38	3	31	7.317073e-02	0	coding only	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-SX-A71S-01A-11D-A33Q-10	131	129	2	99	1.526718e-02	0	coding only	34834024	28	93	8.038118e-07	2.669804e-06
TCGA-SX-A71U-01A-12D-A33Q-10	105	101	4	78	3.809524e-02	0	coding only	34834024	20	68	5.741513e-07	1.952114e-06
TCGA-SX-A71V-01A-11D-A33Q-10	108	103	5	84	4.629630e-02	1	exome+100bp flanks	34834024	18	76	5.167362e-07	2.181775e-06
TCGA-SX-A71W-01A-12D-A34Z-10	34	34	0	27	0	0	coding only	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-SX-A7SL-01A-11D-A34Z-10	88	87	1	72	1.136364e-02	0	coding only	34834024	14	64	4.019059e-07	1.837284e-06
TCGA-SX-A7SM-01A-11D-A34Z-10	84	83	1	63	1.190476e-02	0	coding only	34834024	14	60	4.019059e-07	1.722454e-06
TCGA-SX-A7SN-01A-11D-A34Z-10	103	100	3	81	2.912621e-02	0	coding only	34834024	18	73	5.167362e-07	2.095652e-06
TCGA-SX-A7SO-01A-11D-A34Z-10	50	47	3	39	6.000000e-02	0	coding only	34834024	7	32	2.009530e-07	9.186421e-07
TCGA-SX-A7SP-01A-11D-A34Z-10	83	80	3	64	3.614458e-02	0	coding only	34834024	15	57	4.306135e-07	1.636331e-06
TCGA-SX-A7SQ-01A-12D-A35Z-10	91	91	0	62	0	0	coding only	34834024	26	55	7.463967e-07	1.578916e-06
TCGA-SX-A7SR-01A-12D-A35Z-10	92	90	2	73	2.173913e-02	0	coding only	34834024	17	64	4.880286e-07	1.837284e-06
TCGA-SX-A7SS-01A-11D-A35Z-10	121	117	4	96	3.305785e-02	0	coding only	34834024	19	88	5.454437e-07	2.526266e-06
TCGA-SX-A7SU-01A-11D-A35Z-10	44	42	2	34	4.545455e-02	0	coding only	34834024	8	31	2.296605e-07	8.899345e-07
TCGA-UN-AAZ9-01A-11D-A382-10	25	24	1	21	4.000000e-02	0	coding only	34834024	2	21	5.741513e-08	6.028589e-07
TCGA-UZ-A9PJ-01A-11D-A382-10	60	58	2	40	3.333333e-02	0	coding only	34834024	15	36	4.306135e-07	1.033472e-06
TCGA-UZ-A9PK-01A-11D-A382-10	66	65	1	53	1.515152e-02	0	coding only	34834024	11	50	3.157832e-07	1.435378e-06
TCGA-UZ-A9PL-01A-11D-A382-10	75	71	4	57	5.333333e-02	0	coding only	34834024	14	54	4.019059e-07	1.550208e-06
TCGA-UZ-A9PM-01A-21D-A382-10	58	55	3	42	5.172414e-02	0	coding only	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-UZ-A9PN-01A-11D-A382-10	65	62	3	48	4.615385e-02	0	coding only	34834024	11	44	3.157832e-07	1.263133e-06
TCGA-UZ-A9PO-01A-11D-A382-10	110	108	2	88	1.818182e-02	0	coding only	34834024	19	83	5.454437e-07	2.382728e-06
TCGA-UZ-A9PP-01A-11D-A42J-10	77	75	2	65	2.597403e-02	0	coding only	34834024	9	57	2.583681e-07	1.636331e-06
TCGA-UZ-A9PR-01A-11D-A42J-10	106	105	1	83	9.433962e-03	0	coding only	34834024	21	77	6.028589e-07	2.210482e-06
TCGA-UZ-A9PS-01A-11D-A42J-10	160	159	1	123	6.250000e-03	0	coding only	34834024	35	114	1.004765e-06	3.272662e-06
TCGA-UZ-A9PU-01A-11D-A42J-10	66	66	0	58	0	0	coding only	34834024	8	55	2.296605e-07	1.578916e-06
TCGA-UZ-A9PV-01A-11D-A42J-10	69	67	2	54	2.898551e-02	0	coding only	34834024	11	51	3.157832e-07	1.464086e-06
TCGA-UZ-A9PX-01A-11D-A42J-10	108	105	3	83	2.777778e-02	0	coding only	34834024	21	79	6.028589e-07	2.267898e-06
TCGA-UZ-A9PZ-01A-11D-A42J-10	47	47	0	36	0	0	coding only	34834024	9	33	2.583681e-07	9.473496e-07
TCGA-UZ-A9Q0-01A-12D-A42J-10	70	69	1	55	1.428571e-02	0	coding only	34834024	13	49	3.731983e-07	1.406671e-06
TCGA-UZ-A9Q1-01A-11D-A42J-10	84	81	3	53	3.571429e-02	0	coding only	34834024	26	48	7.463967e-07	1.377963e-06
TCGA-V9-A7HT-01A-11D-A33Q-10	73	72	1	58	1.369863e-02	0	coding only	34834024	14	49	4.019059e-07	1.406671e-06
TCGA-WN-A9G9-01A-12D-A36X-10	65	61	4	47	6.153846e-02	0	coding only	34834024	14	44	4.019059e-07	1.263133e-06
TCGA-WN-AB4C-01A-11D-A42J-10	96	95	1	75	1.041667e-02	0	coding only	34834024	20	69	5.741513e-07	1.980822e-06
TCGA-Y8-A894-01A-11D-A35Z-10	96	93	3	73	3.125000e-02	0	coding only	34834024	17	66	4.880286e-07	1.894699e-06
TCGA-Y8-A895-01A-11D-A35Z-10	103	97	6	80	5.825243e-02	1	exome+100bp flanks	34834024	15	76	4.306135e-07	2.181775e-06
TCGA-Y8-A896-01A-11D-A35Z-10	110	105	5	82	4.545455e-02	1	exome+100bp flanks	34834024	22	76	6.315664e-07	2.181775e-06
TCGA-Y8-A897-01A-11D-A35Z-10	61	60	1	47	1.639344e-02	0	coding only	34834024	11	43	3.157832e-07	1.234425e-06
TCGA-Y8-A898-01A-11D-A34Z-10	83	82	1	66	1.204819e-02	0	coding only	34834024	13	62	3.731983e-07	1.779869e-06
TCGA-Y8-A8RY-01A-11D-A36X-10	74	73	1	55	1.351351e-02	0	coding only	34834024	17	49	4.880286e-07	1.406671e-06
TCGA-Y8-A8RZ-01A-11D-A36X-10	59	59	0	47	0	0	coding only	34834024	12	44	3.444908e-07	1.263133e-06
TCGA-Y8-A8S0-01A-11D-A36X-10	44	42	2	31	4.545455e-02	0	coding only	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-Y8-A8S1-01A-11D-A36X-10	59	58	1	47	1.694915e-02	0	coding only	34834024	10	41	2.870756e-07	1.177010e-06