GS SIZE SOURCE ES NES NOM p-val FDR q-val FWER p-val Tag % Gene % Signal FDR (median) glob.p.val KEGG_GLYCOLYSIS_GLUCONEOGENESIS 58 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCOLYSIS_GLUCONEOGENESIS 0.57416 1.7864 0.002128 0.086247 0.554 0.552 0.185 0.451 0.024862 0.011 KEGG_CITRATE_CYCLE_TCA_CYCLE 29 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CITRATE_CYCLE_TCA_CYCLE 0.81321 1.997 0.001961 0.032733 0.168 0.897 0.167 0.748 0 0.004 KEGG_PENTOSE_PHOSPHATE_PATHWAY 26 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PENTOSE_PHOSPHATE_PATHWAY 0.52531 1.5952 0.03512 0.16275 0.881 0.692 0.21 0.548 0.087098 0.009 KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS 25 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS 0.80991 1.7457 0 0.10522 0.646 0.68 0.118 0.601 0.039208 0.013 KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM 33 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM 0.53663 1.6096 0.02569 0.16088 0.866 0.273 0.0961 0.247 0.082963 0.011 KEGG_FATTY_ACID_METABOLISM 39 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_FATTY_ACID_METABOLISM 0.7289 1.9709 0.002212 0.033932 0.205 0.744 0.13 0.648 0 0.003 KEGG_STEROID_HORMONE_BIOSYNTHESIS 49 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_STEROID_HORMONE_BIOSYNTHESIS 0.68588 1.6943 0 0.12419 0.736 0.408 0.0647 0.383 0.053565 0.01 KEGG_OXIDATIVE_PHOSPHORYLATION 112 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OXIDATIVE_PHOSPHORYLATION 0.56601 1.6454 0.08032 0.14754 0.812 0.75 0.224 0.586 0.070633 0.013 KEGG_PYRIMIDINE_METABOLISM 97 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PYRIMIDINE_METABOLISM 0.35813 1.5352 0.07054 0.21573 0.932 0.423 0.268 0.311 0.13621 0.014 KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM 31 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM 0.67719 1.7548 0.003953 0.10137 0.63 0.516 0.1 0.465 0.037809 0.012 KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM 31 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM 0.8165 1.8713 0 0.0574 0.377 0.645 0.0972 0.583 0 0.007 KEGG_CYSTEINE_AND_METHIONINE_METABOLISM 34 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYSTEINE_AND_METHIONINE_METABOLISM 0.55697 1.6818 0.01062 0.12937 0.758 0.529 0.199 0.425 0.057747 0.012 KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION 44 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION 0.83442 2.0533 0 0.026536 0.107 0.886 0.137 0.767 0 0.003 KEGG_LYSINE_DEGRADATION 44 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LYSINE_DEGRADATION 0.65943 2.2427 0 0.0066777 0.013 0.455 0.13 0.396 0 0.002 KEGG_ARGININE_AND_PROLINE_METABOLISM 53 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ARGININE_AND_PROLINE_METABOLISM 0.63204 1.879 0 0.05708 0.363 0.434 0.127 0.38 0 0.008 KEGG_HISTIDINE_METABOLISM 29 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HISTIDINE_METABOLISM 0.68322 1.6466 0.01613 0.14936 0.81 0.448 0.0683 0.418 0.07166 0.013 KEGG_TYROSINE_METABOLISM 41 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TYROSINE_METABOLISM 0.58727 1.6364 0.006652 0.15058 0.828 0.317 0.0925 0.288 0.074022 0.013 KEGG_TRYPTOPHAN_METABOLISM 38 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TRYPTOPHAN_METABOLISM 0.72657 1.9701 0 0.031508 0.205 0.711 0.13 0.619 0 0.002 KEGG_SELENOAMINO_ACID_METABOLISM 26 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_SELENOAMINO_ACID_METABOLISM 0.48359 1.616 0.04049 0.15995 0.859 0.462 0.201 0.369 0.083519 0.013 KEGG_GLUTATHIONE_METABOLISM 46 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_GLUTATHIONE_METABOLISM 0.55538 1.6484 0.02058 0.15102 0.809 0.37 0.125 0.324 0.073289 0.013 KEGG_STARCH_AND_SUCROSE_METABOLISM 46 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_STARCH_AND_SUCROSE_METABOLISM 0.56159 1.5028 0.02505 0.24172 0.951 0.283 0.0415 0.272 0.15963 0.016 KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM 44 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM 0.51627 1.7014 0.02301 0.12111 0.724 0.636 0.22 0.498 0.049776 0.009 KEGG_PYRUVATE_METABOLISM 39 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PYRUVATE_METABOLISM 0.76866 2.0627 0 0.028842 0.103 0.692 0.162 0.581 0 0.002 KEGG_PROPANOATE_METABOLISM 32 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROPANOATE_METABOLISM 0.81122 1.964 0 0.030635 0.212 0.812 0.13 0.708 0 0.002 KEGG_BUTANOATE_METABOLISM 31 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BUTANOATE_METABOLISM 0.76953 1.9225 0.004057 0.043485 0.286 0.806 0.145 0.691 0 0.004 KEGG_RETINOL_METABOLISM 54 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RETINOL_METABOLISM 0.64789 1.6415 0.002066 0.14867 0.819 0.481 0.101 0.434 0.072016 0.013 KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM 37 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM 0.71207 1.8353 0.002045 0.070721 0.449 0.703 0.176 0.58 0 0.009 KEGG_AMINOACYL_TRNA_BIOSYNTHESIS 41 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AMINOACYL_TRNA_BIOSYNTHESIS 0.68569 2.1717 0 0.014422 0.037 0.854 0.286 0.611 0 0.003 KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 62 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 0.62389 1.6232 0.01006 0.1581 0.85 0.435 0.0921 0.397 0.081634 0.013 KEGG_DRUG_METABOLISM_CYTOCHROME_P450 63 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DRUG_METABOLISM_CYTOCHROME_P450 0.62325 1.6112 0.01008 0.16193 0.862 0.444 0.1 0.401 0.083955 0.013 KEGG_DRUG_METABOLISM_OTHER_ENZYMES 45 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DRUG_METABOLISM_OTHER_ENZYMES 0.69754 1.7819 0.001992 0.085762 0.564 0.444 0.0921 0.405 0.025279 0.009 KEGG_PROTEASOME 43 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROTEASOME 0.52865 1.5971 0.06445 0.1638 0.88 0.814 0.325 0.551 0.086727 0.009 KEGG_PPAR_SIGNALING_PATHWAY 64 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PPAR_SIGNALING_PATHWAY 0.676 1.7658 0 0.095289 0.607 0.562 0.131 0.491 0.032334 0.01 KEGG_LYSOSOME 120 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LYSOSOME 0.42596 1.5879 0.0924 0.16774 0.887 0.567 0.25 0.428 0.092332 0.009 KEGG_PEROXISOME 76 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PEROXISOME 0.72514 2.2925 0 0.0082519 0.008 0.539 0.131 0.471 0 0.002 KEGG_PARKINSONS_DISEASE 111 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PARKINSONS_DISEASE 0.46928 1.5077 0.1258 0.23846 0.949 0.685 0.242 0.522 0.15719 0.015 BIOCARTA_PROTEASOME_PATHWAY 28 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PROTEASOME_PATHWAY 0.65801 1.7456 0.004065 0.10183 0.646 0.893 0.325 0.604 0.037943 0.01 REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE 40 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE 0.66772 1.9727 0.01029 0.035931 0.203 0.75 0.167 0.626 0 0.004 REACTOME_SIGNALING_BY_WNT 62 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SIGNALING_BY_WNT 0.40727 1.6193 0.06274 0.15967 0.854 0.677 0.325 0.459 0.083743 0.011 REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT 115 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT 0.63311 1.8499 0.02474 0.065351 0.419 0.774 0.224 0.605 0 0.008 REACTOME_ER_PHAGOSOME_PATHWAY 57 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ER_PHAGOSOME_PATHWAY 0.53891 1.6809 0.03101 0.12699 0.759 0.807 0.329 0.544 0.057318 0.011 REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS 50 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS 0.60695 2.0292 0 0.025859 0.129 0.48 0.184 0.393 0 0.002 REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING 59 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING 0.52277 2.1366 0.002083 0.017623 0.052 0.593 0.261 0.44 0 0.002 REACTOME_GLYCOSPHINGOLIPID_METABOLISM 35 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_GLYCOSPHINGOLIPID_METABOLISM 0.5365 1.5544 0.02811 0.19773 0.916 0.514 0.193 0.416 0.11799 0.012 REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT 49 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT 0.65631 1.8168 0.0142 0.079178 0.493 0.735 0.259 0.546 0 0.01 REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6 45 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6 0.56829 1.7399 0.0315 0.10324 0.655 0.8 0.325 0.542 0.039773 0.011 REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES 186 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES 0.58249 1.9749 0 0.038065 0.198 0.366 0.107 0.33 0 0.005 REACTOME_BIOLOGICAL_OXIDATIONS 123 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_BIOLOGICAL_OXIDATIONS 0.57939 1.654 0.002024 0.14791 0.802 0.431 0.127 0.379 0.071346 0.013 REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC 47 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC 0.60619 1.8853 0.004008 0.056936 0.35 0.851 0.325 0.576 0 0.009 REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE 29 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE 0.66179 1.5682 0.01653 0.18484 0.906 0.517 0.105 0.464 0.10682 0.01 REACTOME_GLUCONEOGENESIS 29 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_GLUCONEOGENESIS 0.51001 1.5081 0.06387 0.24148 0.949 0.621 0.209 0.492 0.1595 0.016 REACTOME_TRNA_AMINOACYLATION 42 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRNA_AMINOACYLATION 0.69118 2.1065 0 0.020651 0.071 0.833 0.286 0.597 0 0.001 REACTOME_METABOLISM_OF_NUCLEOTIDES 71 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_METABOLISM_OF_NUCLEOTIDES 0.51794 1.7916 0.004158 0.085716 0.55 0.437 0.205 0.348 0.02537 0.011 REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT 228 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SLC_MEDIATED_TRANSMEMBRANE_TRANSPORT 0.4959 1.6275 0.002193 0.15677 0.846 0.276 0.0828 0.257 0.07987 0.013 REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS 84 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRANSPORT_OF_GLUCOSE_AND_OTHER_SUGARS_BILE_SALTS_AND_ORGANIC_ACIDS_METAL_IONS_AND_AMINE_COMPOUNDS 0.63095 1.739 0.002096 0.10085 0.656 0.357 0.0703 0.334 0.038784 0.01 REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS 52 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS 0.51944 2.049 0.002062 0.023984 0.109 0.596 0.261 0.442 0 0.003 REACTOME_AMINO_ACID_AND_OLIGOPEPTIDE_SLC_TRANSPORTERS 45 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_AMINO_ACID_AND_OLIGOPEPTIDE_SLC_TRANSPORTERS 0.59387 1.5438 0.008658 0.20749 0.922 0.467 0.0795 0.431 0.12597 0.013 REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX 47 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX 0.50147 1.5994 0.0856 0.16392 0.879 0.787 0.325 0.533 0.086812 0.01 REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1 46 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1 0.56197 1.7126 0.01167 0.11392 0.708 0.783 0.325 0.53 0.046576 0.009 REACTOME_GLUCOSE_TRANSPORT 38 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_GLUCOSE_TRANSPORT 0.41851 1.4923 0.04481 0.24905 0.958 0.0526 0.00195 0.0526 0.16425 0.016 REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS 443 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS 0.38416 1.6858 0.004237 0.12829 0.746 0.23 0.105 0.211 0.055944 0.011 REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM 165 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM 0.40393 1.7271 0.006579 0.10762 0.684 0.224 0.102 0.203 0.04184 0.009 REACTOME_RESPIRATORY_ELECTRON_TRANSPORT 64 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_RESPIRATORY_ELECTRON_TRANSPORT 0.72429 1.6054 0.03118 0.15993 0.87 0.922 0.258 0.687 0.084945 0.01 REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS 80 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS 0.38652 1.6078 0.06426 0.16012 0.868 0.638 0.325 0.433 0.083111 0.01 REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0 49 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0 0.59524 1.7988 0.01217 0.08387 0.534 0.796 0.325 0.539 0.023821 0.009 REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_ 79 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_ 0.66084 1.5698 0.06571 0.18604 0.905 0.924 0.271 0.677 0.10735 0.01 REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C 56 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C 0.43859 1.514 0.1252 0.23675 0.943 0.768 0.337 0.511 0.15112 0.017 REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1 48 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1 0.47563 1.5247 0.1107 0.22622 0.937 0.771 0.325 0.522 0.14225 0.015 REACTOME_PHASE_II_CONJUGATION 61 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_PHASE_II_CONJUGATION 0.62123 1.7216 0.009728 0.1092 0.691 0.393 0.0939 0.358 0.043617 0.009 REACTOME_GLUCOSE_METABOLISM 62 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_GLUCOSE_METABOLISM 0.4376 1.6729 0.02495 0.13116 0.771 0.516 0.214 0.407 0.060383 0.011 REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G 48 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G 0.61039 1.8156 0.003922 0.076769 0.496 0.812 0.325 0.55 0 0.009