Clinical Features	Time to Death		YEARS_TO_BIRTH		GENDER		RADIATION_THERAPY		KARNOFSKY_PERFORMANCE_SCORE		HISTOLOGICAL_TYPE		RACE		ETHNICITY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
1p gain	13 (3%)	499	0.015979	0.106	0.012556	0.0946	0.26253	0.578	0.034396	0.175	0.79933	0.973	0.0090699	0.0744	0.5558	0.849	1	1
1q gain	23 (4%)	489	0.45659	0.8	5.1015e-05	0.00122	0.52192	0.831	0.65506	0.891	0.11204	0.364	0.083149	0.306	0.27568	0.59	0.38491	0.722
2p gain	14 (3%)	498	0.14872	0.418	0.078307	0.3	0.78728	0.972	0.38688	0.722	0.48534	0.813	0.54775	0.849	1	1	0.59857	0.872
2q gain	13 (3%)	499	0.32142	0.645	0.17237	0.457	0.57703	0.856	0.14185	0.414	0.48534	0.813	0.55948	0.849	1	1	0.56897	0.853
3p gain	11 (2%)	501	0.038982	0.194	0.084858	0.311	0.55061	0.849	1	1	0.8055	0.973	0.02876	0.161	1	1	1	1
3q gain	8 (2%)	504	0.0022017	0.0259	0.033235	0.172	0.47618	0.81	0.4137	0.755	0.30175	0.621	0.091419	0.325	1	1	1	1
4p gain	12 (2%)	500	0.90271	1	0.1222	0.376	1	1	0.38637	0.722	0.69512	0.917	0.081299	0.304	0.16815	0.45	1	1
4q gain	7 (1%)	505	0.11041	0.364	0.010937	0.084	0.46955	0.804	0.25853	0.576	NA	NA	0.15748	0.432	1	1	1	1
5p gain	11 (2%)	501	0.030534	0.166	0.032083	0.17	1	1	0.54293	0.848	0.79137	0.973	0.24337	0.555	0.078999	0.301	1	1
5q gain	9 (2%)	503	0.04198	0.203	0.062693	0.256	0.52051	0.831	1	1	0.97022	1	0.58442	0.857	0.054829	0.237	1	1
6p gain	7 (1%)	505	0.53904	0.848	0.12344	0.377	0.25058	0.566	0.086746	0.314	0.82354	0.983	0.23492	0.549	1	1	1	1
7p gain	120 (23%)	392	9.0527e-08	4.89e-06	1.6286e-10	1.76e-08	0.17398	0.457	0.00077283	0.0111	0.00096213	0.0133	0.23855	0.553	0.0159	0.106	0.83377	0.986
7q gain	150 (29%)	362	2.806e-07	1.21e-05	1.9611e-10	1.82e-08	0.43523	0.775	0.0011597	0.0153	0.0057565	0.0541	0.051359	0.228	0.0093899	0.0761	0.55659	0.849
8p gain	45 (9%)	467	0.62023	0.879	0.8673	1	0.63798	0.885	0.072962	0.288	0.12736	0.386	0.299	0.621	0.55227	0.849	0.75346	0.955
8q gain	55 (11%)	457	0.71929	0.932	0.23032	0.549	0.77425	0.969	0.015895	0.106	0.33527	0.661	0.17573	0.457	0.63017	0.885	0.36871	0.707
9p gain	17 (3%)	495	0.5798	0.857	0.10396	0.35	0.044157	0.207	0.035327	0.177	0.57379	0.853	0.23567	0.549	0.65288	0.891	1	1
9q gain	24 (5%)	488	0.37288	0.713	0.077454	0.299	0.002681	0.03	0.0017725	0.0225	0.55676	0.849	0.058609	0.247	0.21212	0.521	0.6609	0.892
10p gain	57 (11%)	455	0.53647	0.848	0.021506	0.131	0.25834	0.576	0.015879	0.106	0.21725	0.53	0.00026	0.00443	1	1	0.1359	0.403
10q gain	11 (2%)	501	0.85629	1	0.23961	0.553	1	1	0.54293	0.848	0.33579	0.661	0.0086999	0.0723	0.093319	0.328	0.13958	0.409
11p gain	30 (6%)	482	0.17863	0.459	0.029451	0.162	0.34761	0.672	0.18121	0.464	0.639	0.885	0.0080999	0.07	1	1	0.43141	0.77
11q gain	58 (11%)	454	0.12869	0.388	0.12242	0.376	0.26332	0.578	0.8858	1	0.80702	0.973	0.2346	0.549	0.9012	1	0.76738	0.966
12p gain	32 (6%)	480	0.30078	0.621	0.46175	0.8	0.2727	0.589	0.033645	0.173	0.83175	0.985	0.47052	0.804	0.34501	0.669	0.71075	0.924
12q gain	15 (3%)	497	0.0055142	0.0525	0.32445	0.648	0.19303	0.481	0.58117	0.857	0.11984	0.375	0.7996	0.973	0.15358	0.427	0.6133	0.875
13q gain	6 (1%)	506	0.41035	0.753	0.94012	1	1	1	0.033246	0.172	0.067841	0.271	1	1	1	1	1	1
14q gain	4 (1%)	508	0.33321	0.66	0.2518	0.567	1	1	0.64023	0.885	0.9781	1	0.83919	0.991	1	1	0.24276	0.555
15q gain	11 (2%)	501	0.016625	0.109	0.025878	0.15	1	1	0.54293	0.848	0.013525	0.1	0.40633	0.748	0.49576	0.815	1	1
16p gain	16 (3%)	496	0.61556	0.877	0.03189	0.17	0.44473	0.787	0.42606	0.767	0.70831	0.924	0.14564	0.418	0.60889	0.875	0.6133	0.875
16q gain	19 (4%)	493	0.41738	0.755	0.60617	0.875	0.48959	0.813	0.461	0.8	0.63815	0.885	0.01527	0.106	0.67711	0.901	0.62325	0.88
17p gain	20 (4%)	492	0.014261	0.102	0.017613	0.112	0.10635	0.355	0.48961	0.813	0.67823	0.901	0.058969	0.247	0.22313	0.54	1	1
17q gain	23 (4%)	489	0.0083594	0.0713	0.11765	0.374	0.085814	0.312	0.66273	0.892	0.96104	1	0.27044	0.586	0.26008	0.577	0.63596	0.885
18p gain	18 (4%)	494	0.017444	0.112	0.90554	1	0.63879	0.885	0.80644	0.973	0.38286	0.722	0.56366	0.849	0.3056	0.626	0.61853	0.879
18q gain	13 (3%)	499	0.00057211	0.00883	0.78111	0.972	1	1	0.14514	0.418	0.50655	0.819	0.46016	0.8	0.19226	0.481	1	1
19p gain	99 (19%)	413	0.62883	0.885	0.0096413	0.0764	0.26245	0.578	0.043011	0.206	0.46405	0.802	9.9999e-06	0.000282	0.49973	0.816	0.1083	0.36
19q gain	25 (5%)	487	1.9234e-07	8.9e-06	7.0233e-06	0.000228	0.41618	0.755	0.068957	0.274	0.067478	0.271	0.15488	0.429	0.098269	0.337	0.67027	0.896
20p gain	45 (9%)	467	2.9357e-12	3.8e-10	7.2472e-09	5.22e-07	0.75664	0.957	0.02823	0.159	0.009669	0.0764	0.18625	0.473	0.47007	0.804	0.34324	0.668
20q gain	44 (9%)	468	2.0365e-09	1.65e-07	2.0393e-08	1.2e-06	0.34135	0.668	0.02823	0.159	0.014466	0.102	0.23351	0.549	0.63975	0.885	0.50691	0.819
21q gain	23 (4%)	489	0.27552	0.59	0.0053697	0.0519	0.28487	0.603	0.1771	0.457	0.099477	0.339	0.82871	0.985	0.3908	0.724	0.38883	0.722
22q gain	23 (4%)	489	0.64542	0.888	0.045678	0.213	0.83113	0.985	0.12089	0.375	0.19022	0.478	0.00383	0.04	0.73148	0.94	0.159	0.433
xp gain	22 (4%)	490	0.54023	0.848	0.89662	1	0.19041	0.478	0.177	0.457	0.50181	0.817	0.0197	0.123	0.27823	0.593	1	1
xq gain	41 (8%)	471	0.15882	0.433	0.053882	0.236	0.013622	0.1	0.22891	0.549	0.51945	0.831	0.00437	0.0442	0.61077	0.875	0.025399	0.15
1p loss	184 (36%)	328	0.00011182	0.0022	0.0009144	0.0129	0.85345	1	1.8315e-07	8.9e-06	0.29323	0.615	9.9999e-06	0.000282	0.31519	0.636	0.70411	0.924
1q loss	26 (5%)	486	0.42036	0.759	0.11289	0.364	1	1	0.83016	0.985	0.60905	0.875	0.00319	0.0345	0.22905	0.549	1	1
2p loss	21 (4%)	491	0.3075	0.627	0.52802	0.837	0.65609	0.891	0.013821	0.101	0.067739	0.271	0.23174	0.549	1	1	0.38548	0.722
2q loss	18 (4%)	494	0.90853	1	0.48048	0.813	0.81006	0.973	0.12091	0.375	0.22316	0.54	0.04876	0.221	1	1	0.62325	0.88
3p loss	30 (6%)	482	0.049579	0.223	0.88294	1	0.45045	0.795	0.2429	0.555	0.0019229	0.024	0.91502	1	0.31214	0.633	0.43141	0.77
3q loss	28 (5%)	484	0.025781	0.15	0.44344	0.787	0.69653	0.917	0.29985	0.621	0.095542	0.332	0.97005	1	0.27554	0.59	0.70011	0.92
4p loss	72 (14%)	440	0.74016	0.945	0.018784	0.118	0.041334	0.201	1	1	0.95568	1	0.00049	0.00774	0.56205	0.849	0.79848	0.973
4q loss	94 (18%)	418	0.47148	0.804	0.38	0.722	0.20662	0.509	0.80873	0.973	0.74473	0.948	0.01579	0.106	0.82319	0.983	0.81579	0.977
5p loss	35 (7%)	477	0.87074	1	0.25446	0.571	0.86221	1	0.0074737	0.0658	0.35694	0.686	0.0098299	0.0767	0.57027	0.853	0.15328	0.427
5q loss	32 (6%)	480	0.28004	0.595	0.29026	0.611	0.58329	0.857	0.0050416	0.0496	0.66959	0.896	0.03998	0.196	0.66207	0.892	0.71151	0.924
6p loss	30 (6%)	482	0.00010844	0.0022	0.054792	0.237	0.57344	0.853	0.058296	0.247	0.07452	0.289	0.23337	0.549	0.061559	0.252	1	1
6q loss	62 (12%)	450	7.3501e-05	0.0017	0.029133	0.161	0.41378	0.755	0.025341	0.15	0.0012082	0.0157	0.00115	0.0153	0.050359	0.225	0.56342	0.849
7p loss	3 (1%)	509	0.73028	0.94	0.64345	0.887	0.588	0.858	0.52586	0.835	NA	NA	0.787	0.972	1	1	1	1
7q loss	4 (1%)	508	0.88351	1	0.88912	1	0.63252	0.885	0.28879	0.61	0.48992	0.813	0.4562	0.8	1	1	1	1
8p loss	17 (3%)	495	0.047398	0.218	0.17401	0.457	0.81006	0.973	0.091208	0.325	0.32688	0.65	0.38575	0.722	0.11255	0.364	0.31699	0.638
8q loss	11 (2%)	501	0.043943	0.207	0.11137	0.364	0.55061	0.849	0.16299	0.442	0.50655	0.819	0.79762	0.973	0.093639	0.328	0.16367	0.442
9p loss	117 (23%)	395	1.1065e-06	4.48e-05	0.002039	0.0245	1	1	0.00060902	0.00918	0.0019915	0.0243	0.058939	0.247	0.60496	0.875	0.66851	0.896
9q loss	50 (10%)	462	0.0034988	0.0372	0.0059481	0.0551	1	1	0.011018	0.084	0.00036432	0.0059	0.87742	1	0.13637	0.403	1	1
10p loss	83 (16%)	429	0	0	5.9598e-20	1.29e-17	0.81044	0.973	9.1773e-05	0.00205	0.00020298	0.00387	0.00011	0.0022	0.0086699	0.0723	0.80379	0.973
10q loss	97 (19%)	415	0	0	2.8956e-17	4.69e-15	0.73388	0.942	2.9599e-06	0.000107	0.0002119	0.0039	3e-05	0.000778	0.02781	0.159	0.48478	0.813
11p loss	63 (12%)	449	0.030745	0.166	0.26493	0.58	0.34347	0.668	0.006287	0.0574	0.16816	0.45	0.00062999	0.00928	0.5618	0.849	0.78425	0.972
11q loss	21 (4%)	491	9.8608e-05	0.00213	0.14896	0.418	1	1	0.080956	0.304	0.082093	0.304	0.0141	0.102	1	1	1	1
12p loss	28 (5%)	484	0.85487	1	0.11078	0.364	0.56346	0.849	0.4172	0.755	0.48635	0.813	0.13622	0.403	1	1	1	1
12q loss	52 (10%)	460	0.74841	0.951	0.17684	0.457	0.77017	0.967	0.12542	0.382	0.79547	0.973	0.00291	0.032	0.79104	0.973	0.23308	0.549
13q loss	115 (22%)	397	0.24812	0.564	0.72135	0.933	0.13638	0.403	0.00032782	0.00545	0.13694	0.403	0.50855	0.82	0.29443	0.615	0.38812	0.722
14q loss	81 (16%)	431	2.4658e-05	0.000666	3.8432e-05	0.000958	1	1	0.19358	0.481	0.034961	0.177	0.20004	0.495	0.21761	0.53	0.45164	0.795
15q loss	51 (10%)	461	0.31283	0.633	0.34152	0.668	0.65791	0.892	0.26875	0.584	0.77383	0.969	0.64669	0.888	0.78422	0.972	0.75905	0.957
16p loss	14 (3%)	498	0.051978	0.229	0.00024353	0.00427	1	1	0.26627	0.581	0.14902	0.418	0.74089	0.945	0.58208	0.857	0.23944	0.553
16q loss	22 (4%)	490	0.074482	0.289	0.00021689	0.0039	0.66378	0.892	0.021171	0.131	0.073735	0.289	0.51326	0.825	0.4908	0.813	0.65199	0.891
17p loss	14 (3%)	498	0.058681	0.247	0.039678	0.196	0.17366	0.457	1	1	0.016754	0.109	0.55059	0.849	1	1	0.059872	0.247
17q loss	9 (2%)	503	0.57211	0.853	0.080955	0.304	0.52051	0.831	1	1	0.11945	0.375	0.75855	0.957	1	1	0.11641	0.372
18p loss	67 (13%)	445	0.61316	0.875	0.002365	0.0273	0.14701	0.418	1	1	0.45833	0.8	0.1836	0.468	0.097049	0.335	0.78392	0.972
18q loss	62 (12%)	450	0.57267	0.853	0.023556	0.141	0.49872	0.816	0.88495	1	0.85834	1	0.03262	0.172	0.10421	0.35	0.78389	0.972
19p loss	26 (5%)	486	0.90934	1	0.67746	0.901	0.84275	0.993	0.29976	0.621	0.081666	0.304	0.93433	1	0.02188	0.133	0.059359	0.247
19q loss	209 (41%)	303	0.0023987	0.0273	0.043731	0.207	0.92794	1	4.3001e-06	0.000147	0.35294	0.681	9.9999e-06	0.000282	0.91757	1	0.092856	0.328
20p loss	7 (1%)	505	0.90391	1	0.85779	1	0.25058	0.566	0.047167	0.218	0.43032	0.77	0.49496	0.815	0.14736	0.418	0.38628	0.722
20q loss	3 (1%)	509	0.92613	1	0.96558	1	0.087661	0.316	1	1	0.32481	0.648	0.47027	0.804	1	1	0.18806	0.476
21q loss	38 (7%)	474	0.69373	0.917	0.49529	0.815	0.73691	0.944	0.14814	0.418	0.007517	0.0658	0.00412	0.0424	0.58562	0.857	1	1
22q loss	57 (11%)	455	1.9371e-08	1.2e-06	2.0556e-06	7.84e-05	0.48206	0.813	0.048282	0.22	0.0050496	0.0496	0.12051	0.375	0.17338	0.457	0.55975	0.849
xp loss	98 (19%)	414	0.39194	0.724	0.72509	0.936	0.49798	0.816	0.1149	0.369	0.30634	0.626	0.71078	0.924	0.68775	0.911	0.10281	0.349
xq loss	70 (14%)	442	0.0065447	0.0589	0.14904	0.418	0.60652	0.875	0.095879	0.332	0.15667	0.432	0.70674	0.924	0.65108	0.891	1	1