This pipeline computes the correlation between significant copy number variation (cnv focal) genes and molecular subtypes.
Testing the association between copy number variation 56 focal events and 10 molecular subtypes across 184 patients, 238 significant findings detected with P value < 0.05 and Q value < 0.25.
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amp_1p34.2 cnv correlated to 'RPPA_CHIERARCHICAL'.
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amp_1q21.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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amp_2q36.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_3p12.2 cnv correlated to 'METHLYATION_CNMF'.
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amp_3q26.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_4p16.3 cnv correlated to 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_6p21.31 cnv correlated to 'MIRSEQ_CNMF'.
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amp_7q22.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_8p11.22 cnv correlated to 'CN_CNMF'.
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amp_8p11.21 cnv correlated to 'CN_CNMF'.
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amp_8q24.21 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CNMF'.
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amp_12p13.33 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_12p11.21 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_12q15 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_15q26.1 cnv correlated to 'CN_CNMF'.
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amp_17p11.2 cnv correlated to 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_17q12 cnv correlated to 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_18q11.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_19q13.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CNMF'.
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amp_20p11.23 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_xq28 cnv correlated to 'CN_CNMF' and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_1p36.11 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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del_2q14.3 cnv correlated to 'MIRSEQ_CNMF'.
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del_3p21.31 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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del_4q22.1 cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_4q34.3 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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del_5q14.2 cnv correlated to 'CN_CNMF' and 'MRNASEQ_CNMF'.
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del_6p25.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_6p22.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_6q25.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_7q36.1 cnv correlated to 'CN_CNMF' and 'RPPA_CHIERARCHICAL'.
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del_8p21.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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del_9p21.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_10p15.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_10q23.33 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_11p15.4 cnv correlated to 'CN_CNMF' and 'RPPA_CNMF'.
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del_12p13.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_12q24.33 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_14q11.2 cnv correlated to 'METHLYATION_CNMF'.
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del_15q15.1 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_16q23.1 cnv correlated to 'RPPA_CHIERARCHICAL', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_17p12 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_17q22 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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del_18p11.31 cnv correlated to 'CN_CNMF'.
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del_18q21.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_19p13.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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del_19p13.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_19q13.33 cnv correlated to 'CN_CNMF'.
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del_21q11.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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del_22q13.31 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_22q13.32 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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del_xp21.1 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_xq11.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nCNV (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
del 6q25 3 | 91 (49%) | 93 |
1e-05 (0.000224) |
1e-05 (0.000224) |
0.0119 (0.0436) |
0.404 (0.511) |
2e-05 (0.000329) |
0.00507 (0.022) |
0.00427 (0.0199) |
0.00021 (0.00187) |
0.00063 (0.00454) |
0.00973 (0.0368) |
del xq11 2 | 23 (12%) | 161 |
0.00965 (0.0368) |
0.00373 (0.0185) |
0.00164 (0.00996) |
0.288 (0.406) |
0.03 (0.0786) |
0.0199 (0.061) |
0.0167 (0.0544) |
0.0226 (0.0646) |
0.0214 (0.0634) |
0.0161 (0.0543) |
del 9p21 3 | 116 (63%) | 68 |
1e-05 (0.000224) |
1e-05 (0.000224) |
0.151 (0.255) |
0.571 (0.658) |
1e-05 (0.000224) |
8e-05 (0.000878) |
1e-05 (0.000224) |
1e-05 (0.000224) |
1e-05 (0.000224) |
1e-05 (0.000224) |
del 12p13 1 | 29 (16%) | 155 |
0.00019 (0.00177) |
0.00014 (0.00138) |
0.00915 (0.0351) |
0.0514 (0.12) |
0.00087 (0.00587) |
0.0012 (0.00764) |
0.3 (0.417) |
6e-05 (0.000715) |
0.0465 (0.111) |
0.00442 (0.0202) |
del 12q24 33 | 43 (23%) | 141 |
0.00309 (0.0163) |
0.00046 (0.00358) |
0.0145 (0.0511) |
0.0151 (0.0522) |
0.0101 (0.0379) |
0.00325 (0.0169) |
0.115 (0.21) |
0.00064 (0.00454) |
0.138 (0.24) |
0.0249 (0.0694) |
del 17p12 | 89 (48%) | 95 |
1e-05 (0.000224) |
1e-05 (0.000224) |
0.225 (0.343) |
0.461 (0.566) |
1e-05 (0.000224) |
4e-05 (0.000546) |
5e-05 (0.000636) |
8e-05 (0.000878) |
1e-05 (0.000224) |
3e-05 (0.000442) |
del 17q22 | 49 (27%) | 135 |
1e-05 (0.000224) |
0.00083 (0.00567) |
0.00405 (0.0194) |
0.0582 (0.131) |
0.00902 (0.0351) |
0.0149 (0.052) |
0.0222 (0.0638) |
0.0262 (0.071) |
0.00016 (0.00154) |
0.318 (0.432) |
del 18q21 2 | 126 (68%) | 58 |
1e-05 (0.000224) |
1e-05 (0.000224) |
0.244 (0.365) |
0.61 (0.687) |
2e-05 (0.000329) |
5e-05 (0.000636) |
0.0002 (0.00181) |
6e-05 (0.000715) |
0.00124 (0.0078) |
1e-05 (0.000224) |
amp 1q21 3 | 62 (34%) | 122 |
0.00057 (0.00431) |
6e-05 (0.000715) |
0.0666 (0.146) |
0.0787 (0.163) |
0.0165 (0.0543) |
0.0105 (0.0391) |
0.0133 (0.0476) |
0.0158 (0.0538) |
0.00757 (0.0307) |
0.135 (0.237) |
amp 2q36 2 | 26 (14%) | 158 |
0.0186 (0.0579) |
9e-05 (0.000933) |
0.0557 (0.128) |
0.314 (0.428) |
0.0191 (0.0588) |
0.021 (0.0632) |
0.485 (0.589) |
0.00383 (0.0188) |
0.0309 (0.0804) |
0.0319 (0.0827) |
amp 7q22 1 | 56 (30%) | 128 |
3e-05 (0.000442) |
0.0201 (0.0612) |
0.0324 (0.0836) |
0.678 (0.742) |
0.0253 (0.0701) |
0.311 (0.425) |
0.106 (0.199) |
0.0376 (0.0941) |
0.0024 (0.0133) |
0.00477 (0.0212) |
del 6p25 2 | 74 (40%) | 110 |
1e-05 (0.000224) |
2e-05 (0.000329) |
0.00242 (0.0133) |
0.179 (0.289) |
0.00346 (0.0175) |
0.0123 (0.0449) |
0.063 (0.139) |
0.00046 (0.00358) |
0.177 (0.288) |
0.00104 (0.00677) |
del 6p22 2 | 70 (38%) | 114 |
1e-05 (0.000224) |
2e-05 (0.000329) |
0.0362 (0.0917) |
0.56 (0.65) |
0.00471 (0.0212) |
0.0221 (0.0637) |
0.142 (0.245) |
0.00094 (0.00627) |
0.254 (0.374) |
0.00167 (0.00996) |
del 19p13 2 | 28 (15%) | 156 |
0.00061 (0.00449) |
2e-05 (0.000329) |
0.572 (0.658) |
0.0834 (0.169) |
8e-05 (0.000878) |
0.00325 (0.0169) |
0.0972 (0.188) |
0.00039 (0.00312) |
0.00292 (0.0156) |
0.0119 (0.0436) |
del 22q13 31 | 60 (33%) | 124 |
1e-05 (0.000224) |
9e-05 (0.000933) |
0.47 (0.575) |
0.894 (0.919) |
0.0217 (0.0636) |
0.0801 (0.164) |
0.0156 (0.0533) |
0.0165 (0.0543) |
0.0029 (0.0156) |
0.0412 (0.101) |
amp 3q26 2 | 32 (17%) | 152 |
0.00394 (0.0192) |
3e-05 (0.000442) |
0.214 (0.33) |
0.0166 (0.0543) |
2e-05 (0.000329) |
0.0526 (0.122) |
0.59 (0.672) |
0.0171 (0.0547) |
0.136 (0.238) |
0.0184 (0.0579) |
amp 12q15 | 29 (16%) | 155 |
0.00028 (0.00231) |
0.00417 (0.0198) |
0.289 (0.406) |
0.0751 (0.16) |
0.00689 (0.0286) |
0.329 (0.443) |
0.0326 (0.0838) |
0.0769 (0.161) |
0.0467 (0.111) |
0.00144 (0.00896) |
amp 18q11 2 | 56 (30%) | 128 |
5e-05 (0.000636) |
0.00106 (0.00682) |
0.0751 (0.16) |
0.102 (0.194) |
0.00066 (0.00456) |
0.0756 (0.16) |
0.0219 (0.0636) |
0.00054 (0.00414) |
0.189 (0.301) |
0.00022 (0.00192) |
del 10p15 3 | 41 (22%) | 143 |
2e-05 (0.000329) |
0.235 (0.353) |
0.896 (0.919) |
0.674 (0.741) |
0.00101 (0.00665) |
0.0126 (0.0457) |
0.657 (0.73) |
0.0242 (0.0684) |
0.00038 (0.00308) |
0.0155 (0.0532) |
del 19p13 3 | 36 (20%) | 148 |
2e-05 (0.000329) |
1e-05 (0.000224) |
0.782 (0.829) |
0.253 (0.374) |
0.00013 (0.0013) |
0.00183 (0.0106) |
0.452 (0.559) |
0.00914 (0.0351) |
0.0476 (0.112) |
0.115 (0.21) |
amp 4p16 3 | 15 (8%) | 169 |
0.157 (0.262) |
0.676 (0.741) |
0.137 (0.239) |
0.0713 (0.155) |
0.043 (0.105) |
0.0184 (0.0579) |
0.186 (0.297) |
0.0255 (0.0701) |
0.0386 (0.0961) |
0.00168 (0.00996) |
amp 12p13 33 | 39 (21%) | 145 |
0.00023 (0.00198) |
0.0002 (0.00181) |
0.401 (0.509) |
0.276 (0.394) |
0.0133 (0.0476) |
0.552 (0.645) |
0.058 (0.131) |
0.197 (0.309) |
0.0149 (0.052) |
0.00368 (0.0184) |
amp 12p11 21 | 43 (23%) | 141 |
3e-05 (0.000442) |
2e-05 (0.000329) |
0.498 (0.602) |
0.463 (0.568) |
0.00059 (0.00441) |
0.31 (0.425) |
0.0733 (0.157) |
0.0079 (0.0318) |
0.0895 (0.177) |
0.0188 (0.0581) |
amp 20p11 23 | 38 (21%) | 146 |
0.00624 (0.0266) |
0.00671 (0.028) |
0.0775 (0.161) |
0.119 (0.215) |
0.0757 (0.16) |
0.395 (0.503) |
0.0496 (0.117) |
0.0259 (0.0707) |
0.272 (0.39) |
0.00443 (0.0202) |
del 1p36 11 | 68 (37%) | 116 |
8e-05 (0.000878) |
1e-05 (0.000224) |
0.0163 (0.0543) |
0.284 (0.401) |
0.00018 (0.00171) |
0.0184 (0.0579) |
0.192 (0.303) |
0.0855 (0.17) |
0.0956 (0.185) |
0.167 (0.276) |
del 8p21 3 | 62 (34%) | 122 |
1e-05 (0.000224) |
0.00475 (0.0212) |
0.41 (0.516) |
0.147 (0.251) |
0.0186 (0.0579) |
0.028 (0.0754) |
0.645 (0.721) |
0.0286 (0.076) |
0.339 (0.45) |
0.348 (0.453) |
del 15q15 1 | 36 (20%) | 148 |
0.00496 (0.0219) |
0.0563 (0.129) |
0.265 (0.385) |
0.437 (0.545) |
0.0168 (0.0544) |
0.00331 (0.017) |
0.67 (0.737) |
0.034 (0.087) |
0.588 (0.672) |
0.0088 (0.0345) |
del 22q13 32 | 61 (33%) | 123 |
1e-05 (0.000224) |
9e-05 (0.000933) |
0.756 (0.808) |
0.943 (0.956) |
0.0468 (0.111) |
0.0721 (0.155) |
0.0377 (0.0941) |
0.165 (0.275) |
0.00733 (0.03) |
0.286 (0.403) |
del 3p21 31 | 51 (28%) | 133 |
0.017 (0.0546) |
0.0055 (0.0237) |
0.237 (0.356) |
0.544 (0.639) |
0.00423 (0.0199) |
0.788 (0.832) |
0.105 (0.198) |
0.0434 (0.105) |
0.632 (0.709) |
0.113 (0.207) |
del 4q22 1 | 27 (15%) | 157 |
0.387 (0.495) |
0.00806 (0.032) |
0.336 (0.448) |
0.144 (0.248) |
0.00631 (0.0266) |
0.0883 (0.175) |
0.345 (0.451) |
0.0016 (0.00985) |
0.156 (0.261) |
0.0262 (0.071) |
del 10q23 33 | 35 (19%) | 149 |
4e-05 (0.000546) |
0.799 (0.839) |
0.567 (0.656) |
0.309 (0.425) |
0.0219 (0.0636) |
0.179 (0.289) |
0.148 (0.251) |
0.538 (0.633) |
0.0162 (0.0543) |
0.0398 (0.0978) |
del 16q23 1 | 19 (10%) | 165 |
0.404 (0.511) |
0.769 (0.819) |
0.189 (0.3) |
0.00631 (0.0266) |
0.417 (0.524) |
0.0465 (0.111) |
0.0246 (0.0689) |
0.338 (0.449) |
0.251 (0.372) |
0.0136 (0.0483) |
del xp21 1 | 28 (15%) | 156 |
0.00841 (0.0332) |
0.211 (0.329) |
0.0389 (0.0963) |
0.656 (0.73) |
0.28 (0.399) |
0.293 (0.408) |
0.0295 (0.0776) |
0.655 (0.73) |
0.0601 (0.134) |
0.0215 (0.0634) |
amp 8q24 21 | 74 (40%) | 110 |
1e-05 (0.000224) |
0.00025 (0.00212) |
0.108 (0.201) |
0.14 (0.243) |
0.00333 (0.017) |
0.0613 (0.136) |
0.123 (0.222) |
0.0562 (0.129) |
0.105 (0.198) |
0.0818 (0.167) |
amp 17q12 | 31 (17%) | 153 |
0.0844 (0.169) |
0.0855 (0.17) |
0.961 (0.97) |
0.986 (0.987) |
0.0283 (0.0755) |
0.214 (0.33) |
0.0227 (0.0646) |
0.0601 (0.134) |
0.502 (0.602) |
0.00264 (0.0144) |
amp 19q13 2 | 47 (26%) | 137 |
0.00012 (0.00122) |
0.00993 (0.0373) |
0.343 (0.451) |
0.512 (0.609) |
0.00503 (0.022) |
0.872 (0.901) |
0.429 (0.536) |
0.227 (0.344) |
0.308 (0.425) |
0.352 (0.456) |
del 21q11 2 | 62 (34%) | 122 |
4e-05 (0.000546) |
0.00225 (0.0126) |
0.344 (0.451) |
0.213 (0.33) |
0.129 (0.229) |
0.0579 (0.131) |
0.22 (0.338) |
0.0211 (0.0632) |
0.0771 (0.161) |
0.36 (0.465) |
amp xq28 | 20 (11%) | 164 |
0.00432 (0.02) |
0.459 (0.565) |
0.283 (0.401) |
0.135 (0.237) |
0.245 (0.366) |
0.215 (0.33) |
0.0949 (0.184) |
0.327 (0.442) |
0.0911 (0.178) |
0.0294 (0.0776) |
del 4q34 3 | 35 (19%) | 149 |
0.0255 (0.0701) |
0.0352 (0.0896) |
0.107 (0.201) |
0.0538 (0.124) |
0.0776 (0.161) |
0.622 (0.699) |
0.799 (0.839) |
0.17 (0.28) |
0.446 (0.554) |
0.138 (0.24) |
del 5q14 2 | 35 (19%) | 149 |
0.00175 (0.0102) |
0.0905 (0.178) |
0.292 (0.408) |
0.148 (0.251) |
0.00196 (0.0112) |
0.221 (0.338) |
0.291 (0.408) |
0.177 (0.288) |
0.148 (0.251) |
0.18 (0.289) |
del 7q36 1 | 15 (8%) | 169 |
0.0397 (0.0978) |
0.129 (0.229) |
0.152 (0.256) |
0.0213 (0.0634) |
0.177 (0.288) |
0.605 (0.684) |
0.827 (0.863) |
0.341 (0.451) |
0.536 (0.632) |
0.161 (0.268) |
del 11p15 4 | 29 (16%) | 155 |
0.00729 (0.03) |
0.5 (0.602) |
0.00213 (0.012) |
0.0833 (0.169) |
0.593 (0.674) |
0.784 (0.83) |
0.51 (0.609) |
0.55 (0.643) |
0.692 (0.751) |
0.56 (0.65) |
amp 1p34 2 | 13 (7%) | 171 |
0.336 (0.448) |
0.812 (0.85) |
0.171 (0.28) |
0.0433 (0.105) |
0.916 (0.934) |
0.265 (0.385) |
0.486 (0.589) |
0.918 (0.935) |
0.263 (0.384) |
0.752 (0.806) |
amp 3p12 2 | 12 (7%) | 172 |
0.127 (0.227) |
0.0283 (0.0755) |
0.0844 (0.169) |
0.771 (0.819) |
0.146 (0.25) |
0.92 (0.935) |
0.608 (0.686) |
1 (1.00) |
0.637 (0.713) |
0.98 (0.984) |
amp 6p21 31 | 12 (7%) | 172 |
0.109 (0.201) |
0.248 (0.369) |
0.683 (0.744) |
0.683 (0.744) |
0.42 (0.526) |
0.855 (0.885) |
0.0372 (0.0939) |
0.716 (0.772) |
0.572 (0.658) |
0.38 (0.489) |
amp 8p11 22 | 34 (18%) | 150 |
0.0205 (0.062) |
0.268 (0.386) |
0.124 (0.224) |
0.336 (0.448) |
0.375 (0.482) |
0.698 (0.755) |
0.512 (0.609) |
0.69 (0.751) |
0.352 (0.456) |
0.67 (0.737) |
amp 8p11 21 | 34 (18%) | 150 |
0.00066 (0.00456) |
0.128 (0.229) |
0.234 (0.353) |
0.457 (0.563) |
0.329 (0.443) |
0.697 (0.755) |
0.342 (0.451) |
0.212 (0.33) |
0.0902 (0.178) |
0.486 (0.589) |
amp 15q26 1 | 22 (12%) | 162 |
0.00064 (0.00454) |
0.102 (0.194) |
0.335 (0.448) |
0.67 (0.737) |
0.835 (0.87) |
0.111 (0.205) |
0.585 (0.67) |
0.535 (0.632) |
0.077 (0.161) |
0.347 (0.453) |
amp 17p11 2 | 15 (8%) | 169 |
0.895 (0.919) |
0.269 (0.386) |
0.371 (0.479) |
0.408 (0.515) |
0.102 (0.194) |
0.0505 (0.118) |
0.302 (0.419) |
0.112 (0.207) |
0.0683 (0.149) |
0.00169 (0.00996) |
del 2q14 3 | 9 (5%) | 175 |
0.256 (0.376) |
0.189 (0.3) |
0.344 (0.451) |
0.196 (0.309) |
0.315 (0.428) |
0.482 (0.588) |
0.00028 (0.00231) |
0.718 (0.773) |
0.514 (0.61) |
0.116 (0.212) |
del 14q11 2 | 20 (11%) | 164 |
0.45 (0.557) |
0.00397 (0.0192) |
0.909 (0.931) |
0.737 (0.79) |
0.0688 (0.15) |
0.134 (0.237) |
0.057 (0.13) |
0.248 (0.369) |
0.282 (0.4) |
0.789 (0.832) |
del 18p11 31 | 54 (29%) | 130 |
0.00805 (0.032) |
0.666 (0.737) |
0.267 (0.386) |
0.18 (0.29) |
0.5 (0.602) |
0.975 (0.98) |
0.101 (0.194) |
0.853 (0.885) |
0.125 (0.224) |
0.192 (0.303) |
del 19q13 33 | 22 (12%) | 162 |
0.0245 (0.0689) |
0.0718 (0.155) |
0.59 (0.672) |
0.531 (0.629) |
0.227 (0.344) |
0.227 (0.344) |
0.385 (0.494) |
0.0841 (0.169) |
0.6 (0.68) |
0.262 (0.383) |
amp 1p12 | 27 (15%) | 157 |
0.104 (0.197) |
0.916 (0.934) |
0.168 (0.278) |
0.202 (0.316) |
0.8 (0.839) |
0.442 (0.551) |
0.945 (0.957) |
0.26 (0.382) |
0.0923 (0.18) |
0.669 (0.737) |
amp 9p13 3 | 24 (13%) | 160 |
0.17 (0.279) |
0.888 (0.916) |
0.947 (0.957) |
0.311 (0.425) |
0.827 (0.863) |
0.392 (0.5) |
0.58 (0.666) |
0.0799 (0.164) |
0.975 (0.98) |
0.104 (0.197) |
del 7q31 1 | 15 (8%) | 169 |
0.268 (0.386) |
0.735 (0.79) |
0.559 (0.65) |
0.0584 (0.131) |
0.501 (0.602) |
0.308 (0.425) |
0.851 (0.884) |
0.51 (0.609) |
0.77 (0.819) |
0.546 (0.64) |
P value = 0.0433 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 47 | 25 | 16 | 16 | 18 |
AMP PEAK 1(1P34.2) MUTATED | 1 | 3 | 0 | 3 | 0 |
AMP PEAK 1(1P34.2) WILD-TYPE | 46 | 22 | 16 | 13 | 18 |
P value = 0.00057 (Fisher's exact test), Q value = 0.0043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 3(1Q21.3) MUTATED | 8 | 33 | 5 | 16 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 18 | 41 | 41 | 22 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
AMP PEAK 3(1Q21.3) MUTATED | 27 | 10 | 19 | 6 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 18 | 39 | 33 | 31 |
P value = 0.0165 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
AMP PEAK 3(1Q21.3) MUTATED | 20 | 7 | 16 | 12 | 4 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 19 | 19 | 27 | 27 | 26 |
P value = 0.0105 (Fisher's exact test), Q value = 0.039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
AMP PEAK 3(1Q21.3) MUTATED | 22 | 33 | 4 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 52 | 42 | 24 |
P value = 0.0133 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
AMP PEAK 3(1Q21.3) MUTATED | 26 | 8 | 7 | 11 | 7 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 26 | 39 | 18 | 20 | 15 |
P value = 0.0158 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 3(1Q21.3) MUTATED | 42 | 12 | 5 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 60 | 30 | 28 |
P value = 0.00757 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
AMP PEAK 3(1Q21.3) MUTATED | 9 | 5 | 9 | 2 | 26 | 6 | 1 |
AMP PEAK 3(1Q21.3) WILD-TYPE | 18 | 6 | 18 | 11 | 25 | 21 | 16 |
P value = 0.0186 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 4(2Q36.2) MUTATED | 5 | 15 | 1 | 5 |
AMP PEAK 4(2Q36.2) WILD-TYPE | 21 | 59 | 45 | 33 |
P value = 9e-05 (Fisher's exact test), Q value = 0.00093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
AMP PEAK 4(2Q36.2) MUTATED | 10 | 2 | 13 | 0 |
AMP PEAK 4(2Q36.2) WILD-TYPE | 35 | 47 | 39 | 37 |
P value = 0.0191 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
AMP PEAK 4(2Q36.2) MUTATED | 7 | 2 | 12 | 3 | 1 |
AMP PEAK 4(2Q36.2) WILD-TYPE | 32 | 24 | 31 | 36 | 29 |
P value = 0.021 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
AMP PEAK 4(2Q36.2) MUTATED | 10 | 15 | 0 |
AMP PEAK 4(2Q36.2) WILD-TYPE | 64 | 60 | 28 |
P value = 0.00383 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 4(2Q36.2) MUTATED | 22 | 2 | 1 |
AMP PEAK 4(2Q36.2) WILD-TYPE | 80 | 40 | 32 |
P value = 0.0309 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
AMP PEAK 4(2Q36.2) MUTATED | 1 | 2 | 6 | 1 | 13 | 2 | 0 |
AMP PEAK 4(2Q36.2) WILD-TYPE | 26 | 9 | 21 | 12 | 38 | 25 | 17 |
P value = 0.0319 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
AMP PEAK 4(2Q36.2) MUTATED | 6 | 11 | 3 | 4 | 1 | 0 |
AMP PEAK 4(2Q36.2) WILD-TYPE | 17 | 33 | 16 | 49 | 25 | 8 |
P value = 0.0283 (Fisher's exact test), Q value = 0.075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
AMP PEAK 5(3P12.2) MUTATED | 6 | 1 | 5 | 0 |
AMP PEAK 5(3P12.2) WILD-TYPE | 39 | 48 | 47 | 37 |
P value = 0.00394 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 6(3Q26.2) MUTATED | 5 | 21 | 2 | 4 |
AMP PEAK 6(3Q26.2) WILD-TYPE | 21 | 53 | 44 | 34 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
AMP PEAK 6(3Q26.2) MUTATED | 11 | 1 | 18 | 2 |
AMP PEAK 6(3Q26.2) WILD-TYPE | 34 | 48 | 34 | 35 |
P value = 0.0166 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 47 | 25 | 16 | 16 | 18 |
AMP PEAK 6(3Q26.2) MUTATED | 9 | 3 | 1 | 2 | 9 |
AMP PEAK 6(3Q26.2) WILD-TYPE | 38 | 22 | 15 | 14 | 9 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
AMP PEAK 6(3Q26.2) MUTATED | 5 | 1 | 20 | 3 | 2 |
AMP PEAK 6(3Q26.2) WILD-TYPE | 34 | 25 | 23 | 36 | 28 |
P value = 0.0171 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 6(3Q26.2) MUTATED | 25 | 3 | 3 |
AMP PEAK 6(3Q26.2) WILD-TYPE | 77 | 39 | 30 |
P value = 0.0184 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
AMP PEAK 6(3Q26.2) MUTATED | 2 | 16 | 2 | 7 | 3 | 0 |
AMP PEAK 6(3Q26.2) WILD-TYPE | 21 | 28 | 17 | 46 | 23 | 8 |
P value = 0.043 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
AMP PEAK 7(4P16.3) MUTATED | 3 | 5 | 3 | 0 | 4 |
AMP PEAK 7(4P16.3) WILD-TYPE | 36 | 21 | 40 | 39 | 26 |
P value = 0.0184 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
AMP PEAK 7(4P16.3) MUTATED | 2 | 8 | 5 |
AMP PEAK 7(4P16.3) WILD-TYPE | 72 | 67 | 23 |
P value = 0.0255 (Fisher's exact test), Q value = 0.07
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 7(4P16.3) MUTATED | 10 | 0 | 5 |
AMP PEAK 7(4P16.3) WILD-TYPE | 92 | 42 | 28 |
P value = 0.0386 (Fisher's exact test), Q value = 0.096
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
AMP PEAK 7(4P16.3) MUTATED | 0 | 1 | 1 | 3 | 5 | 1 | 4 |
AMP PEAK 7(4P16.3) WILD-TYPE | 27 | 10 | 26 | 10 | 46 | 26 | 13 |
P value = 0.00168 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
AMP PEAK 7(4P16.3) MUTATED | 1 | 5 | 3 | 1 | 1 | 4 |
AMP PEAK 7(4P16.3) WILD-TYPE | 22 | 39 | 16 | 52 | 25 | 4 |
P value = 0.0372 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
AMP PEAK 8(6P21.31) MUTATED | 3 | 1 | 2 | 6 | 0 |
AMP PEAK 8(6P21.31) WILD-TYPE | 49 | 46 | 23 | 25 | 22 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 9(7Q22.1) MUTATED | 6 | 30 | 3 | 17 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 20 | 44 | 43 | 21 |
P value = 0.0201 (Fisher's exact test), Q value = 0.061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
AMP PEAK 9(7Q22.1) MUTATED | 15 | 11 | 23 | 6 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 30 | 38 | 29 | 31 |
P value = 0.0324 (Fisher's exact test), Q value = 0.084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
AMP PEAK 9(7Q22.1) MUTATED | 14 | 8 | 1 | 2 | 9 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 25 | 17 | 19 | 13 | 14 |
P value = 0.0253 (Fisher's exact test), Q value = 0.07
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
AMP PEAK 9(7Q22.1) MUTATED | 15 | 10 | 17 | 7 | 4 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 24 | 16 | 26 | 32 | 26 |
P value = 0.0376 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 9(7Q22.1) MUTATED | 38 | 7 | 8 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 64 | 35 | 25 |
P value = 0.0024 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
AMP PEAK 9(7Q22.1) MUTATED | 5 | 6 | 8 | 0 | 23 | 4 | 6 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 22 | 5 | 19 | 13 | 28 | 23 | 11 |
P value = 0.00477 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
AMP PEAK 9(7Q22.1) MUTATED | 7 | 18 | 7 | 11 | 3 | 6 |
AMP PEAK 9(7Q22.1) WILD-TYPE | 16 | 26 | 12 | 42 | 23 | 2 |
P value = 0.0205 (Fisher's exact test), Q value = 0.062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 10(8P11.22) MUTATED | 6 | 11 | 4 | 13 |
AMP PEAK 10(8P11.22) WILD-TYPE | 20 | 63 | 42 | 25 |
P value = 0.00066 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 11(8P11.21) MUTATED | 7 | 11 | 2 | 14 |
AMP PEAK 11(8P11.21) WILD-TYPE | 19 | 63 | 44 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 12(8Q24.21) MUTATED | 6 | 49 | 3 | 16 |
AMP PEAK 12(8Q24.21) WILD-TYPE | 20 | 25 | 43 | 22 |
P value = 0.00025 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
AMP PEAK 12(8Q24.21) MUTATED | 25 | 13 | 28 | 7 |
AMP PEAK 12(8Q24.21) WILD-TYPE | 20 | 36 | 24 | 30 |
P value = 0.00333 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
AMP PEAK 12(8Q24.21) MUTATED | 18 | 9 | 26 | 14 | 5 |
AMP PEAK 12(8Q24.21) WILD-TYPE | 21 | 17 | 17 | 25 | 25 |
P value = 0.00023 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 14(12P13.33) MUTATED | 1 | 25 | 3 | 10 |
AMP PEAK 14(12P13.33) WILD-TYPE | 25 | 49 | 43 | 28 |
P value = 2e-04 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
AMP PEAK 14(12P13.33) MUTATED | 14 | 9 | 16 | 0 |
AMP PEAK 14(12P13.33) WILD-TYPE | 31 | 40 | 36 | 37 |
P value = 0.0133 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
AMP PEAK 14(12P13.33) MUTATED | 9 | 9 | 13 | 6 | 1 |
AMP PEAK 14(12P13.33) WILD-TYPE | 30 | 17 | 30 | 33 | 29 |
P value = 0.0149 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
AMP PEAK 14(12P13.33) MUTATED | 5 | 2 | 5 | 0 | 15 | 2 | 8 |
AMP PEAK 14(12P13.33) WILD-TYPE | 22 | 9 | 22 | 13 | 36 | 25 | 9 |
P value = 0.00368 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
AMP PEAK 14(12P13.33) MUTATED | 2 | 12 | 4 | 11 | 2 | 6 |
AMP PEAK 14(12P13.33) WILD-TYPE | 21 | 32 | 15 | 42 | 24 | 2 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 15(12P11.21) MUTATED | 2 | 28 | 2 | 11 |
AMP PEAK 15(12P11.21) WILD-TYPE | 24 | 46 | 44 | 27 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
AMP PEAK 15(12P11.21) MUTATED | 20 | 7 | 16 | 0 |
AMP PEAK 15(12P11.21) WILD-TYPE | 25 | 42 | 36 | 37 |
P value = 0.00059 (Fisher's exact test), Q value = 0.0044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
AMP PEAK 15(12P11.21) MUTATED | 10 | 10 | 16 | 3 | 2 |
AMP PEAK 15(12P11.21) WILD-TYPE | 29 | 16 | 27 | 36 | 28 |
P value = 0.0079 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 15(12P11.21) MUTATED | 27 | 3 | 11 |
AMP PEAK 15(12P11.21) WILD-TYPE | 75 | 39 | 22 |
P value = 0.0188 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
AMP PEAK 15(12P11.21) MUTATED | 4 | 13 | 4 | 9 | 4 | 6 |
AMP PEAK 15(12P11.21) WILD-TYPE | 19 | 31 | 15 | 44 | 22 | 2 |
P value = 0.00028 (Fisher's exact test), Q value = 0.0023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 16(12Q15) MUTATED | 0 | 20 | 2 | 7 |
AMP PEAK 16(12Q15) WILD-TYPE | 26 | 54 | 44 | 31 |
P value = 0.00417 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
AMP PEAK 16(12Q15) MUTATED | 10 | 7 | 12 | 0 |
AMP PEAK 16(12Q15) WILD-TYPE | 35 | 42 | 40 | 37 |
P value = 0.00689 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
AMP PEAK 16(12Q15) MUTATED | 5 | 9 | 10 | 3 | 1 |
AMP PEAK 16(12Q15) WILD-TYPE | 34 | 17 | 33 | 36 | 29 |
P value = 0.0326 (Fisher's exact test), Q value = 0.084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
AMP PEAK 16(12Q15) MUTATED | 10 | 2 | 3 | 9 | 4 |
AMP PEAK 16(12Q15) WILD-TYPE | 42 | 45 | 22 | 22 | 18 |
P value = 0.0467 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
AMP PEAK 16(12Q15) MUTATED | 3 | 0 | 3 | 0 | 10 | 4 | 7 |
AMP PEAK 16(12Q15) WILD-TYPE | 24 | 11 | 24 | 13 | 41 | 23 | 10 |
P value = 0.00144 (Fisher's exact test), Q value = 0.009
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
AMP PEAK 16(12Q15) MUTATED | 1 | 9 | 2 | 6 | 3 | 6 |
AMP PEAK 16(12Q15) WILD-TYPE | 22 | 35 | 17 | 47 | 23 | 2 |
P value = 0.00064 (Fisher's exact test), Q value = 0.0045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 17(15Q26.1) MUTATED | 4 | 16 | 0 | 2 |
AMP PEAK 17(15Q26.1) WILD-TYPE | 22 | 58 | 46 | 36 |
P value = 0.00169 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
AMP PEAK 18(17P11.2) MUTATED | 1 | 4 | 1 | 3 | 1 | 5 |
AMP PEAK 18(17P11.2) WILD-TYPE | 22 | 40 | 18 | 50 | 25 | 3 |
P value = 0.0283 (Fisher's exact test), Q value = 0.075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
AMP PEAK 19(17Q12) MUTATED | 7 | 8 | 11 | 2 | 3 |
AMP PEAK 19(17Q12) WILD-TYPE | 32 | 18 | 32 | 37 | 27 |
P value = 0.0227 (Fisher's exact test), Q value = 0.065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
AMP PEAK 19(17Q12) MUTATED | 13 | 6 | 0 | 8 | 4 |
AMP PEAK 19(17Q12) WILD-TYPE | 39 | 41 | 25 | 23 | 18 |
P value = 0.00264 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
AMP PEAK 19(17Q12) MUTATED | 3 | 13 | 1 | 5 | 4 | 5 |
AMP PEAK 19(17Q12) WILD-TYPE | 20 | 31 | 18 | 48 | 22 | 3 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 20(18Q11.2) MUTATED | 8 | 33 | 3 | 12 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 18 | 41 | 43 | 26 |
P value = 0.00106 (Fisher's exact test), Q value = 0.0068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
AMP PEAK 20(18Q11.2) MUTATED | 20 | 10 | 21 | 4 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 25 | 39 | 31 | 33 |
P value = 0.00066 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
AMP PEAK 20(18Q11.2) MUTATED | 21 | 6 | 16 | 8 | 3 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 18 | 20 | 27 | 31 | 27 |
P value = 0.0219 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
AMP PEAK 20(18Q11.2) MUTATED | 24 | 10 | 6 | 11 | 3 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 28 | 37 | 19 | 20 | 19 |
P value = 0.00054 (Fisher's exact test), Q value = 0.0041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 20(18Q11.2) MUTATED | 42 | 9 | 3 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 60 | 33 | 30 |
P value = 0.00022 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
AMP PEAK 20(18Q11.2) MUTATED | 11 | 20 | 6 | 13 | 0 | 3 |
AMP PEAK 20(18Q11.2) WILD-TYPE | 12 | 24 | 13 | 40 | 26 | 5 |
P value = 0.00012 (Fisher's exact test), Q value = 0.0012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 21(19Q13.2) MUTATED | 6 | 29 | 2 | 10 |
AMP PEAK 21(19Q13.2) WILD-TYPE | 20 | 45 | 44 | 28 |
P value = 0.00993 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
AMP PEAK 21(19Q13.2) MUTATED | 11 | 9 | 22 | 5 |
AMP PEAK 21(19Q13.2) WILD-TYPE | 34 | 40 | 30 | 32 |
P value = 0.00503 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
AMP PEAK 21(19Q13.2) MUTATED | 9 | 12 | 16 | 4 | 5 |
AMP PEAK 21(19Q13.2) WILD-TYPE | 30 | 14 | 27 | 35 | 25 |
P value = 0.00624 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 22(20P11.23) MUTATED | 2 | 19 | 4 | 13 |
AMP PEAK 22(20P11.23) WILD-TYPE | 24 | 55 | 42 | 25 |
P value = 0.00671 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
AMP PEAK 22(20P11.23) MUTATED | 16 | 8 | 11 | 2 |
AMP PEAK 22(20P11.23) WILD-TYPE | 29 | 41 | 41 | 35 |
P value = 0.0496 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
AMP PEAK 22(20P11.23) MUTATED | 13 | 6 | 3 | 12 | 3 |
AMP PEAK 22(20P11.23) WILD-TYPE | 39 | 41 | 22 | 19 | 19 |
P value = 0.0259 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
AMP PEAK 22(20P11.23) MUTATED | 27 | 3 | 7 |
AMP PEAK 22(20P11.23) WILD-TYPE | 75 | 39 | 26 |
P value = 0.00443 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
AMP PEAK 22(20P11.23) MUTATED | 3 | 12 | 7 | 7 | 2 | 5 |
AMP PEAK 22(20P11.23) WILD-TYPE | 20 | 32 | 12 | 46 | 24 | 3 |
P value = 0.00432 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
AMP PEAK 23(XQ28) MUTATED | 0 | 14 | 1 | 5 |
AMP PEAK 23(XQ28) WILD-TYPE | 26 | 60 | 45 | 33 |
P value = 0.0294 (Fisher's exact test), Q value = 0.078
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
AMP PEAK 23(XQ28) MUTATED | 3 | 6 | 0 | 5 | 2 | 4 |
AMP PEAK 23(XQ28) WILD-TYPE | 20 | 38 | 19 | 48 | 24 | 4 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 1(1P36.11) MUTATED | 8 | 40 | 6 | 14 |
DEL PEAK 1(1P36.11) WILD-TYPE | 18 | 34 | 40 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 1(1P36.11) MUTATED | 33 | 15 | 18 | 2 |
DEL PEAK 1(1P36.11) WILD-TYPE | 12 | 34 | 34 | 35 |
P value = 0.0163 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 1(1P36.11) MUTATED | 24 | 6 | 9 | 4 | 7 |
DEL PEAK 1(1P36.11) WILD-TYPE | 15 | 19 | 11 | 11 | 16 |
P value = 0.00018 (Fisher's exact test), Q value = 0.0017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 1(1P36.11) MUTATED | 23 | 9 | 15 | 15 | 2 |
DEL PEAK 1(1P36.11) WILD-TYPE | 16 | 17 | 28 | 24 | 28 |
P value = 0.0184 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 1(1P36.11) MUTATED | 27 | 33 | 4 |
DEL PEAK 1(1P36.11) WILD-TYPE | 47 | 42 | 24 |
P value = 0.00028 (Fisher's exact test), Q value = 0.0023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
DEL PEAK 2(2Q14.3) MUTATED | 2 | 0 | 0 | 7 | 0 |
DEL PEAK 2(2Q14.3) WILD-TYPE | 50 | 47 | 25 | 24 | 22 |
P value = 0.017 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 3(3P21.31) MUTATED | 10 | 23 | 5 | 13 |
DEL PEAK 3(3P21.31) WILD-TYPE | 16 | 51 | 41 | 25 |
P value = 0.0055 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 3(3P21.31) MUTATED | 18 | 10 | 19 | 4 |
DEL PEAK 3(3P21.31) WILD-TYPE | 27 | 39 | 33 | 33 |
P value = 0.00423 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 3(3P21.31) MUTATED | 16 | 5 | 18 | 7 | 3 |
DEL PEAK 3(3P21.31) WILD-TYPE | 23 | 21 | 25 | 32 | 27 |
P value = 0.0434 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 3(3P21.31) MUTATED | 35 | 6 | 8 |
DEL PEAK 3(3P21.31) WILD-TYPE | 67 | 36 | 25 |
P value = 0.00806 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 4(4Q22.1) MUTATED | 11 | 1 | 9 | 6 |
DEL PEAK 4(4Q22.1) WILD-TYPE | 34 | 48 | 43 | 31 |
P value = 0.00631 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 4(4Q22.1) MUTATED | 6 | 3 | 10 | 0 | 7 |
DEL PEAK 4(4Q22.1) WILD-TYPE | 33 | 23 | 33 | 39 | 23 |
P value = 0.0016 (Fisher's exact test), Q value = 0.0098
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 4(4Q22.1) MUTATED | 19 | 0 | 7 |
DEL PEAK 4(4Q22.1) WILD-TYPE | 83 | 42 | 26 |
P value = 0.0262 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 4(4Q22.1) MUTATED | 3 | 9 | 5 | 2 | 6 | 0 |
DEL PEAK 4(4Q22.1) WILD-TYPE | 20 | 35 | 14 | 51 | 20 | 8 |
P value = 0.0255 (Fisher's exact test), Q value = 0.07
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 5(4Q34.3) MUTATED | 2 | 22 | 5 | 6 |
DEL PEAK 5(4Q34.3) WILD-TYPE | 24 | 52 | 41 | 32 |
P value = 0.0352 (Fisher's exact test), Q value = 0.09
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 5(4Q34.3) MUTATED | 12 | 4 | 14 | 5 |
DEL PEAK 5(4Q34.3) WILD-TYPE | 33 | 45 | 38 | 32 |
P value = 0.00175 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 6(5Q14.2) MUTATED | 5 | 23 | 2 | 5 |
DEL PEAK 6(5Q14.2) WILD-TYPE | 21 | 51 | 44 | 33 |
P value = 0.00196 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 6(5Q14.2) MUTATED | 7 | 0 | 16 | 7 | 4 |
DEL PEAK 6(5Q14.2) WILD-TYPE | 32 | 26 | 27 | 32 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 7(6P25.2) MUTATED | 17 | 38 | 0 | 19 |
DEL PEAK 7(6P25.2) WILD-TYPE | 9 | 36 | 46 | 19 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 7(6P25.2) MUTATED | 25 | 11 | 31 | 6 |
DEL PEAK 7(6P25.2) WILD-TYPE | 20 | 38 | 21 | 31 |
P value = 0.00242 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 7(6P25.2) MUTATED | 26 | 5 | 8 | 4 | 8 |
DEL PEAK 7(6P25.2) WILD-TYPE | 13 | 20 | 12 | 11 | 15 |
P value = 0.00346 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 7(6P25.2) MUTATED | 21 | 8 | 24 | 11 | 6 |
DEL PEAK 7(6P25.2) WILD-TYPE | 18 | 18 | 19 | 28 | 24 |
P value = 0.0123 (Fisher's exact test), Q value = 0.045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 7(6P25.2) MUTATED | 28 | 37 | 5 |
DEL PEAK 7(6P25.2) WILD-TYPE | 46 | 38 | 23 |
P value = 0.00046 (Fisher's exact test), Q value = 0.0036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 7(6P25.2) MUTATED | 53 | 10 | 7 |
DEL PEAK 7(6P25.2) WILD-TYPE | 49 | 32 | 26 |
P value = 0.00104 (Fisher's exact test), Q value = 0.0068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 7(6P25.2) MUTATED | 13 | 26 | 7 | 18 | 3 | 3 |
DEL PEAK 7(6P25.2) WILD-TYPE | 10 | 18 | 12 | 35 | 23 | 5 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 8(6P22.2) MUTATED | 14 | 36 | 0 | 20 |
DEL PEAK 8(6P22.2) WILD-TYPE | 12 | 38 | 46 | 18 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 8(6P22.2) MUTATED | 23 | 10 | 30 | 6 |
DEL PEAK 8(6P22.2) WILD-TYPE | 22 | 39 | 22 | 31 |
P value = 0.0362 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 8(6P22.2) MUTATED | 23 | 6 | 8 | 4 | 7 |
DEL PEAK 8(6P22.2) WILD-TYPE | 16 | 19 | 12 | 11 | 16 |
P value = 0.00471 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 8(6P22.2) MUTATED | 17 | 8 | 25 | 10 | 6 |
DEL PEAK 8(6P22.2) WILD-TYPE | 22 | 18 | 18 | 29 | 24 |
P value = 0.0221 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 8(6P22.2) MUTATED | 26 | 35 | 5 |
DEL PEAK 8(6P22.2) WILD-TYPE | 48 | 40 | 23 |
P value = 0.00094 (Fisher's exact test), Q value = 0.0063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 8(6P22.2) MUTATED | 50 | 9 | 7 |
DEL PEAK 8(6P22.2) WILD-TYPE | 52 | 33 | 26 |
P value = 0.00167 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 8(6P22.2) MUTATED | 11 | 26 | 7 | 16 | 3 | 3 |
DEL PEAK 8(6P22.2) WILD-TYPE | 12 | 18 | 12 | 37 | 23 | 5 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 9(6Q25.3) MUTATED | 18 | 48 | 0 | 25 |
DEL PEAK 9(6Q25.3) WILD-TYPE | 8 | 26 | 46 | 13 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 9(6Q25.3) MUTATED | 30 | 13 | 38 | 9 |
DEL PEAK 9(6Q25.3) WILD-TYPE | 15 | 36 | 14 | 28 |
P value = 0.0119 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 9(6Q25.3) MUTATED | 27 | 8 | 11 | 4 | 13 |
DEL PEAK 9(6Q25.3) WILD-TYPE | 12 | 17 | 9 | 11 | 10 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 9(6Q25.3) MUTATED | 23 | 9 | 33 | 13 | 8 |
DEL PEAK 9(6Q25.3) WILD-TYPE | 16 | 17 | 10 | 26 | 22 |
P value = 0.00507 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 9(6Q25.3) MUTATED | 34 | 45 | 7 |
DEL PEAK 9(6Q25.3) WILD-TYPE | 40 | 30 | 21 |
P value = 0.00427 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
DEL PEAK 9(6Q25.3) MUTATED | 36 | 18 | 11 | 15 | 6 |
DEL PEAK 9(6Q25.3) WILD-TYPE | 16 | 29 | 14 | 16 | 16 |
P value = 0.00021 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 9(6Q25.3) MUTATED | 63 | 12 | 11 |
DEL PEAK 9(6Q25.3) WILD-TYPE | 39 | 30 | 22 |
P value = 0.00063 (Fisher's exact test), Q value = 0.0045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 9(6Q25.3) MUTATED | 11 | 7 | 10 | 3 | 38 | 10 | 6 |
DEL PEAK 9(6Q25.3) WILD-TYPE | 16 | 4 | 17 | 10 | 13 | 17 | 11 |
P value = 0.00973 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 9(6Q25.3) MUTATED | 13 | 30 | 9 | 24 | 6 | 3 |
DEL PEAK 9(6Q25.3) WILD-TYPE | 10 | 14 | 10 | 29 | 20 | 5 |
P value = 0.0397 (Fisher's exact test), Q value = 0.098
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 11(7Q36.1) MUTATED | 2 | 10 | 0 | 3 |
DEL PEAK 11(7Q36.1) WILD-TYPE | 24 | 64 | 46 | 35 |
P value = 0.0213 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 47 | 25 | 16 | 16 | 18 |
DEL PEAK 11(7Q36.1) MUTATED | 1 | 4 | 2 | 0 | 4 |
DEL PEAK 11(7Q36.1) WILD-TYPE | 46 | 21 | 14 | 16 | 14 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 12(8P21.3) MUTATED | 7 | 48 | 5 | 2 |
DEL PEAK 12(8P21.3) WILD-TYPE | 19 | 26 | 41 | 36 |
P value = 0.00475 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 12(8P21.3) MUTATED | 17 | 11 | 26 | 7 |
DEL PEAK 12(8P21.3) WILD-TYPE | 28 | 38 | 26 | 30 |
P value = 0.0186 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 12(8P21.3) MUTATED | 14 | 8 | 23 | 9 | 6 |
DEL PEAK 12(8P21.3) WILD-TYPE | 25 | 18 | 20 | 30 | 24 |
P value = 0.028 (Fisher's exact test), Q value = 0.075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 12(8P21.3) MUTATED | 22 | 33 | 5 |
DEL PEAK 12(8P21.3) WILD-TYPE | 52 | 42 | 23 |
P value = 0.0286 (Fisher's exact test), Q value = 0.076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 12(8P21.3) MUTATED | 43 | 9 | 8 |
DEL PEAK 12(8P21.3) WILD-TYPE | 59 | 33 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 13(9P21.3) MUTATED | 20 | 66 | 7 | 23 |
DEL PEAK 13(9P21.3) WILD-TYPE | 6 | 8 | 39 | 15 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 13(9P21.3) MUTATED | 38 | 17 | 47 | 13 |
DEL PEAK 13(9P21.3) WILD-TYPE | 7 | 32 | 5 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 13(9P21.3) MUTATED | 33 | 7 | 40 | 17 | 12 |
DEL PEAK 13(9P21.3) WILD-TYPE | 6 | 19 | 3 | 22 | 18 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 13(9P21.3) MUTATED | 44 | 57 | 8 |
DEL PEAK 13(9P21.3) WILD-TYPE | 30 | 18 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
DEL PEAK 13(9P21.3) MUTATED | 49 | 22 | 14 | 15 | 9 |
DEL PEAK 13(9P21.3) WILD-TYPE | 3 | 25 | 11 | 16 | 13 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 13(9P21.3) MUTATED | 80 | 17 | 12 |
DEL PEAK 13(9P21.3) WILD-TYPE | 22 | 25 | 21 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 13(9P21.3) MUTATED | 13 | 9 | 15 | 4 | 46 | 16 | 5 |
DEL PEAK 13(9P21.3) WILD-TYPE | 14 | 2 | 12 | 9 | 5 | 11 | 12 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 13(9P21.3) MUTATED | 19 | 40 | 9 | 28 | 11 | 1 |
DEL PEAK 13(9P21.3) WILD-TYPE | 4 | 4 | 10 | 25 | 15 | 7 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 14(10P15.3) MUTATED | 11 | 18 | 0 | 12 |
DEL PEAK 14(10P15.3) WILD-TYPE | 15 | 56 | 46 | 26 |
P value = 0.00101 (Fisher's exact test), Q value = 0.0067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 14(10P15.3) MUTATED | 5 | 6 | 20 | 6 | 3 |
DEL PEAK 14(10P15.3) WILD-TYPE | 34 | 20 | 23 | 33 | 27 |
P value = 0.0126 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 14(10P15.3) MUTATED | 10 | 25 | 5 |
DEL PEAK 14(10P15.3) WILD-TYPE | 64 | 50 | 23 |
P value = 0.0242 (Fisher's exact test), Q value = 0.068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 14(10P15.3) MUTATED | 30 | 4 | 6 |
DEL PEAK 14(10P15.3) WILD-TYPE | 72 | 38 | 27 |
P value = 0.00038 (Fisher's exact test), Q value = 0.0031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 14(10P15.3) MUTATED | 2 | 7 | 2 | 2 | 17 | 3 | 6 |
DEL PEAK 14(10P15.3) WILD-TYPE | 25 | 4 | 25 | 11 | 34 | 24 | 11 |
P value = 0.0155 (Fisher's exact test), Q value = 0.053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 14(10P15.3) MUTATED | 6 | 15 | 6 | 8 | 1 | 3 |
DEL PEAK 14(10P15.3) WILD-TYPE | 17 | 29 | 13 | 45 | 25 | 5 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 15(10Q23.33) MUTATED | 10 | 17 | 0 | 8 |
DEL PEAK 15(10Q23.33) WILD-TYPE | 16 | 57 | 46 | 30 |
P value = 0.0219 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 15(10Q23.33) MUTATED | 3 | 5 | 15 | 7 | 3 |
DEL PEAK 15(10Q23.33) WILD-TYPE | 36 | 21 | 28 | 32 | 27 |
P value = 0.0162 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 15(10Q23.33) MUTATED | 1 | 5 | 6 | 2 | 10 | 2 | 6 |
DEL PEAK 15(10Q23.33) WILD-TYPE | 26 | 6 | 21 | 11 | 41 | 25 | 11 |
P value = 0.0398 (Fisher's exact test), Q value = 0.098
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 15(10Q23.33) MUTATED | 5 | 9 | 5 | 10 | 0 | 3 |
DEL PEAK 15(10Q23.33) WILD-TYPE | 18 | 35 | 14 | 43 | 26 | 5 |
P value = 0.00729 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 16(11P15.4) MUTATED | 5 | 13 | 1 | 10 |
DEL PEAK 16(11P15.4) WILD-TYPE | 21 | 61 | 45 | 28 |
P value = 0.00213 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 16(11P15.4) MUTATED | 10 | 1 | 0 | 1 | 8 |
DEL PEAK 16(11P15.4) WILD-TYPE | 29 | 24 | 20 | 14 | 15 |
P value = 0.00019 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 17(12P13.1) MUTATED | 10 | 15 | 1 | 3 |
DEL PEAK 17(12P13.1) WILD-TYPE | 16 | 59 | 45 | 35 |
P value = 0.00014 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 17(12P13.1) MUTATED | 9 | 1 | 16 | 3 |
DEL PEAK 17(12P13.1) WILD-TYPE | 36 | 48 | 36 | 34 |
P value = 0.00915 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 17(12P13.1) MUTATED | 12 | 2 | 0 | 1 | 2 |
DEL PEAK 17(12P13.1) WILD-TYPE | 27 | 23 | 20 | 14 | 21 |
P value = 0.00087 (Fisher's exact test), Q value = 0.0059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 17(12P13.1) MUTATED | 13 | 2 | 9 | 1 | 2 |
DEL PEAK 17(12P13.1) WILD-TYPE | 26 | 24 | 34 | 38 | 28 |
P value = 0.0012 (Fisher's exact test), Q value = 0.0076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 17(12P13.1) MUTATED | 6 | 20 | 1 |
DEL PEAK 17(12P13.1) WILD-TYPE | 68 | 55 | 27 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 17(12P13.1) MUTATED | 25 | 0 | 2 |
DEL PEAK 17(12P13.1) WILD-TYPE | 77 | 42 | 31 |
P value = 0.0465 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 17(12P13.1) MUTATED | 2 | 3 | 1 | 1 | 14 | 4 | 1 |
DEL PEAK 17(12P13.1) WILD-TYPE | 25 | 8 | 26 | 12 | 37 | 23 | 16 |
P value = 0.00442 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 17(12P13.1) MUTATED | 7 | 11 | 4 | 2 | 2 | 0 |
DEL PEAK 17(12P13.1) WILD-TYPE | 16 | 33 | 15 | 51 | 24 | 8 |
P value = 0.00309 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 18(12Q24.33) MUTATED | 11 | 22 | 4 | 6 |
DEL PEAK 18(12Q24.33) WILD-TYPE | 15 | 52 | 42 | 32 |
P value = 0.00046 (Fisher's exact test), Q value = 0.0036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 18(12Q24.33) MUTATED | 12 | 5 | 22 | 4 |
DEL PEAK 18(12Q24.33) WILD-TYPE | 33 | 44 | 30 | 33 |
P value = 0.0145 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 18(12Q24.33) MUTATED | 15 | 3 | 4 | 0 | 4 |
DEL PEAK 18(12Q24.33) WILD-TYPE | 24 | 22 | 16 | 15 | 19 |
P value = 0.0151 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 47 | 25 | 16 | 16 | 18 |
DEL PEAK 18(12Q24.33) MUTATED | 14 | 3 | 2 | 0 | 7 |
DEL PEAK 18(12Q24.33) WILD-TYPE | 33 | 22 | 14 | 16 | 11 |
P value = 0.0101 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 18(12Q24.33) MUTATED | 10 | 3 | 18 | 7 | 3 |
DEL PEAK 18(12Q24.33) WILD-TYPE | 29 | 23 | 25 | 32 | 27 |
P value = 0.00325 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 18(12Q24.33) MUTATED | 15 | 25 | 1 |
DEL PEAK 18(12Q24.33) WILD-TYPE | 59 | 50 | 27 |
P value = 0.00064 (Fisher's exact test), Q value = 0.0045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 18(12Q24.33) MUTATED | 34 | 5 | 2 |
DEL PEAK 18(12Q24.33) WILD-TYPE | 68 | 37 | 31 |
P value = 0.0249 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 18(12Q24.33) MUTATED | 6 | 15 | 6 | 12 | 1 | 0 |
DEL PEAK 18(12Q24.33) WILD-TYPE | 17 | 29 | 13 | 41 | 25 | 8 |
P value = 0.00397 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 19(14Q11.2) MUTATED | 8 | 1 | 10 | 1 |
DEL PEAK 19(14Q11.2) WILD-TYPE | 37 | 48 | 42 | 36 |
P value = 0.00496 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 20(15Q15.1) MUTATED | 5 | 22 | 2 | 7 |
DEL PEAK 20(15Q15.1) WILD-TYPE | 21 | 52 | 44 | 31 |
P value = 0.0168 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 20(15Q15.1) MUTATED | 8 | 2 | 16 | 4 | 5 |
DEL PEAK 20(15Q15.1) WILD-TYPE | 31 | 24 | 27 | 35 | 25 |
P value = 0.00331 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 20(15Q15.1) MUTATED | 11 | 23 | 1 |
DEL PEAK 20(15Q15.1) WILD-TYPE | 63 | 52 | 27 |
P value = 0.034 (Fisher's exact test), Q value = 0.087
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 20(15Q15.1) MUTATED | 27 | 5 | 3 |
DEL PEAK 20(15Q15.1) WILD-TYPE | 75 | 37 | 30 |
P value = 0.0088 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 20(15Q15.1) MUTATED | 3 | 13 | 8 | 7 | 1 | 1 |
DEL PEAK 20(15Q15.1) WILD-TYPE | 20 | 31 | 11 | 46 | 25 | 7 |
P value = 0.00631 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 47 | 25 | 16 | 16 | 18 |
DEL PEAK 21(16Q23.1) MUTATED | 1 | 0 | 1 | 4 | 0 |
DEL PEAK 21(16Q23.1) WILD-TYPE | 46 | 25 | 15 | 12 | 18 |
P value = 0.0465 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 21(16Q23.1) MUTATED | 3 | 12 | 3 |
DEL PEAK 21(16Q23.1) WILD-TYPE | 71 | 63 | 25 |
P value = 0.0246 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
DEL PEAK 21(16Q23.1) MUTATED | 2 | 4 | 1 | 8 | 3 |
DEL PEAK 21(16Q23.1) WILD-TYPE | 50 | 43 | 24 | 23 | 19 |
P value = 0.0136 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 21(16Q23.1) MUTATED | 4 | 2 | 4 | 3 | 1 | 3 |
DEL PEAK 21(16Q23.1) WILD-TYPE | 19 | 42 | 15 | 50 | 25 | 5 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 22(17P12) MUTATED | 10 | 55 | 2 | 22 |
DEL PEAK 22(17P12) WILD-TYPE | 16 | 19 | 44 | 16 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 22(17P12) MUTATED | 28 | 11 | 42 | 8 |
DEL PEAK 22(17P12) WILD-TYPE | 17 | 38 | 10 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 22(17P12) MUTATED | 27 | 6 | 33 | 13 | 7 |
DEL PEAK 22(17P12) WILD-TYPE | 12 | 20 | 10 | 26 | 23 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 22(17P12) MUTATED | 40 | 43 | 3 |
DEL PEAK 22(17P12) WILD-TYPE | 34 | 32 | 25 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
DEL PEAK 22(17P12) MUTATED | 40 | 16 | 13 | 11 | 6 |
DEL PEAK 22(17P12) WILD-TYPE | 12 | 31 | 12 | 20 | 16 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 22(17P12) MUTATED | 63 | 16 | 7 |
DEL PEAK 22(17P12) WILD-TYPE | 39 | 26 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 22(17P12) MUTATED | 10 | 4 | 14 | 0 | 41 | 12 | 4 |
DEL PEAK 22(17P12) WILD-TYPE | 17 | 7 | 13 | 13 | 10 | 15 | 13 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 22(17P12) MUTATED | 13 | 34 | 7 | 24 | 7 | 0 |
DEL PEAK 22(17P12) WILD-TYPE | 10 | 10 | 12 | 29 | 19 | 8 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 23(17Q22) MUTATED | 5 | 33 | 1 | 10 |
DEL PEAK 23(17Q22) WILD-TYPE | 21 | 41 | 45 | 28 |
P value = 0.00083 (Fisher's exact test), Q value = 0.0057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 23(17Q22) MUTATED | 18 | 6 | 20 | 5 |
DEL PEAK 23(17Q22) WILD-TYPE | 27 | 43 | 32 | 32 |
P value = 0.00405 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 23(17Q22) MUTATED | 19 | 5 | 1 | 3 | 8 |
DEL PEAK 23(17Q22) WILD-TYPE | 20 | 20 | 19 | 12 | 15 |
P value = 0.00902 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 23(17Q22) MUTATED | 18 | 4 | 14 | 6 | 5 |
DEL PEAK 23(17Q22) WILD-TYPE | 21 | 22 | 29 | 33 | 25 |
P value = 0.0149 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 23(17Q22) MUTATED | 19 | 26 | 2 |
DEL PEAK 23(17Q22) WILD-TYPE | 55 | 49 | 26 |
P value = 0.0222 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
DEL PEAK 23(17Q22) MUTATED | 23 | 8 | 6 | 6 | 4 |
DEL PEAK 23(17Q22) WILD-TYPE | 29 | 39 | 19 | 25 | 18 |
P value = 0.0262 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 23(17Q22) MUTATED | 35 | 7 | 5 |
DEL PEAK 23(17Q22) WILD-TYPE | 67 | 35 | 28 |
P value = 0.00016 (Fisher's exact test), Q value = 0.0015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 23(17Q22) MUTATED | 5 | 1 | 6 | 1 | 27 | 5 | 1 |
DEL PEAK 23(17Q22) WILD-TYPE | 22 | 10 | 21 | 12 | 24 | 22 | 16 |
P value = 0.00805 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 24(18P11.31) MUTATED | 5 | 22 | 8 | 19 |
DEL PEAK 24(18P11.31) WILD-TYPE | 21 | 52 | 38 | 19 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 25(18Q21.2) MUTATED | 18 | 70 | 10 | 28 |
DEL PEAK 25(18Q21.2) WILD-TYPE | 8 | 4 | 36 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 25(18Q21.2) MUTATED | 37 | 23 | 47 | 18 |
DEL PEAK 25(18Q21.2) WILD-TYPE | 8 | 26 | 5 | 19 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 25(18Q21.2) MUTATED | 31 | 14 | 39 | 23 | 13 |
DEL PEAK 25(18Q21.2) WILD-TYPE | 8 | 12 | 4 | 16 | 17 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 25(18Q21.2) MUTATED | 51 | 60 | 9 |
DEL PEAK 25(18Q21.2) WILD-TYPE | 23 | 15 | 19 |
P value = 2e-04 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
DEL PEAK 25(18Q21.2) MUTATED | 46 | 27 | 19 | 14 | 14 |
DEL PEAK 25(18Q21.2) WILD-TYPE | 6 | 20 | 6 | 17 | 8 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 25(18Q21.2) MUTATED | 82 | 25 | 13 |
DEL PEAK 25(18Q21.2) WILD-TYPE | 20 | 17 | 20 |
P value = 0.00124 (Fisher's exact test), Q value = 0.0078
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 25(18Q21.2) MUTATED | 18 | 9 | 16 | 6 | 44 | 18 | 6 |
DEL PEAK 25(18Q21.2) WILD-TYPE | 9 | 2 | 11 | 7 | 7 | 9 | 11 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 25(18Q21.2) MUTATED | 20 | 38 | 12 | 36 | 11 | 0 |
DEL PEAK 25(18Q21.2) WILD-TYPE | 3 | 6 | 7 | 17 | 15 | 8 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 26(19P13.3) MUTATED | 7 | 24 | 0 | 5 |
DEL PEAK 26(19P13.3) WILD-TYPE | 19 | 50 | 46 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 26(19P13.3) MUTATED | 10 | 1 | 22 | 3 |
DEL PEAK 26(19P13.3) WILD-TYPE | 35 | 48 | 30 | 34 |
P value = 0.00013 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 26(19P13.3) MUTATED | 7 | 2 | 20 | 3 | 4 |
DEL PEAK 26(19P13.3) WILD-TYPE | 32 | 24 | 23 | 36 | 26 |
P value = 0.00183 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 26(19P13.3) MUTATED | 11 | 24 | 1 |
DEL PEAK 26(19P13.3) WILD-TYPE | 63 | 51 | 27 |
P value = 0.00914 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 26(19P13.3) MUTATED | 29 | 4 | 3 |
DEL PEAK 26(19P13.3) WILD-TYPE | 73 | 38 | 30 |
P value = 0.0476 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 26(19P13.3) MUTATED | 5 | 4 | 4 | 2 | 17 | 2 | 1 |
DEL PEAK 26(19P13.3) WILD-TYPE | 22 | 7 | 23 | 11 | 34 | 25 | 16 |
P value = 0.00061 (Fisher's exact test), Q value = 0.0045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 27(19P13.2) MUTATED | 6 | 17 | 0 | 5 |
DEL PEAK 27(19P13.2) WILD-TYPE | 20 | 57 | 46 | 33 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 27(19P13.2) MUTATED | 6 | 1 | 19 | 2 |
DEL PEAK 27(19P13.2) WILD-TYPE | 39 | 48 | 33 | 35 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 27(19P13.2) MUTATED | 4 | 0 | 17 | 3 | 3 |
DEL PEAK 27(19P13.2) WILD-TYPE | 35 | 26 | 26 | 36 | 27 |
P value = 0.00325 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 27(19P13.2) MUTATED | 9 | 18 | 0 |
DEL PEAK 27(19P13.2) WILD-TYPE | 65 | 57 | 28 |
P value = 0.00039 (Fisher's exact test), Q value = 0.0031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 27(19P13.2) MUTATED | 24 | 3 | 0 |
DEL PEAK 27(19P13.2) WILD-TYPE | 78 | 39 | 33 |
P value = 0.00292 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 27(19P13.2) MUTATED | 3 | 3 | 3 | 2 | 15 | 0 | 0 |
DEL PEAK 27(19P13.2) WILD-TYPE | 24 | 8 | 24 | 11 | 36 | 27 | 17 |
P value = 0.0119 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 27(19P13.2) MUTATED | 3 | 12 | 5 | 6 | 0 | 0 |
DEL PEAK 27(19P13.2) WILD-TYPE | 20 | 32 | 14 | 47 | 26 | 8 |
P value = 0.0245 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 28(19Q13.33) MUTATED | 5 | 13 | 1 | 3 |
DEL PEAK 28(19Q13.33) WILD-TYPE | 21 | 61 | 45 | 35 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 29(21Q11.2) MUTATED | 8 | 35 | 3 | 16 |
DEL PEAK 29(21Q11.2) WILD-TYPE | 18 | 39 | 43 | 22 |
P value = 0.00225 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 29(21Q11.2) MUTATED | 18 | 10 | 26 | 7 |
DEL PEAK 29(21Q11.2) WILD-TYPE | 27 | 39 | 26 | 30 |
P value = 0.0211 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 29(21Q11.2) MUTATED | 41 | 12 | 5 |
DEL PEAK 29(21Q11.2) WILD-TYPE | 61 | 30 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 30(22Q13.31) MUTATED | 1 | 42 | 2 | 15 |
DEL PEAK 30(22Q13.31) WILD-TYPE | 25 | 32 | 44 | 23 |
P value = 9e-05 (Fisher's exact test), Q value = 0.00093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 30(22Q13.31) MUTATED | 20 | 10 | 26 | 4 |
DEL PEAK 30(22Q13.31) WILD-TYPE | 25 | 39 | 26 | 33 |
P value = 0.0217 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 30(22Q13.31) MUTATED | 18 | 7 | 18 | 10 | 4 |
DEL PEAK 30(22Q13.31) WILD-TYPE | 21 | 19 | 25 | 29 | 26 |
P value = 0.0156 (Fisher's exact test), Q value = 0.053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
DEL PEAK 30(22Q13.31) MUTATED | 25 | 11 | 10 | 8 | 3 |
DEL PEAK 30(22Q13.31) WILD-TYPE | 27 | 36 | 15 | 23 | 19 |
P value = 0.0165 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 30(22Q13.31) MUTATED | 41 | 11 | 5 |
DEL PEAK 30(22Q13.31) WILD-TYPE | 61 | 31 | 28 |
P value = 0.0029 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 30(22Q13.31) MUTATED | 8 | 2 | 7 | 1 | 28 | 8 | 2 |
DEL PEAK 30(22Q13.31) WILD-TYPE | 19 | 9 | 20 | 12 | 23 | 19 | 15 |
P value = 0.0412 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 30(22Q13.31) MUTATED | 10 | 18 | 6 | 18 | 2 | 2 |
DEL PEAK 30(22Q13.31) WILD-TYPE | 13 | 26 | 13 | 35 | 24 | 6 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 31(22Q13.32) MUTATED | 1 | 42 | 2 | 16 |
DEL PEAK 31(22Q13.32) WILD-TYPE | 25 | 32 | 44 | 22 |
P value = 9e-05 (Fisher's exact test), Q value = 0.00093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 31(22Q13.32) MUTATED | 21 | 11 | 25 | 4 |
DEL PEAK 31(22Q13.32) WILD-TYPE | 24 | 38 | 27 | 33 |
P value = 0.0468 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 31(22Q13.32) MUTATED | 17 | 8 | 18 | 11 | 4 |
DEL PEAK 31(22Q13.32) WILD-TYPE | 22 | 18 | 25 | 28 | 26 |
P value = 0.0377 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
DEL PEAK 31(22Q13.32) MUTATED | 24 | 11 | 11 | 8 | 4 |
DEL PEAK 31(22Q13.32) WILD-TYPE | 28 | 36 | 14 | 23 | 18 |
P value = 0.00733 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 31(22Q13.32) MUTATED | 8 | 2 | 8 | 1 | 27 | 9 | 2 |
DEL PEAK 31(22Q13.32) WILD-TYPE | 19 | 9 | 19 | 12 | 24 | 18 | 15 |
P value = 0.00841 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 32(XP21.1) MUTATED | 3 | 17 | 1 | 7 |
DEL PEAK 32(XP21.1) WILD-TYPE | 23 | 57 | 45 | 31 |
P value = 0.0389 (Fisher's exact test), Q value = 0.096
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 32(XP21.1) MUTATED | 8 | 0 | 1 | 1 | 5 |
DEL PEAK 32(XP21.1) WILD-TYPE | 31 | 25 | 19 | 14 | 18 |
P value = 0.0295 (Fisher's exact test), Q value = 0.078
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
DEL PEAK 32(XP21.1) MUTATED | 14 | 3 | 3 | 6 | 1 |
DEL PEAK 32(XP21.1) WILD-TYPE | 38 | 44 | 22 | 25 | 21 |
P value = 0.0215 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 32(XP21.1) MUTATED | 3 | 13 | 0 | 6 | 2 | 2 |
DEL PEAK 32(XP21.1) WILD-TYPE | 20 | 31 | 19 | 47 | 24 | 6 |
P value = 0.00965 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 26 | 74 | 46 | 38 |
DEL PEAK 33(XQ11.2) MUTATED | 3 | 16 | 1 | 3 |
DEL PEAK 33(XQ11.2) WILD-TYPE | 23 | 58 | 45 | 35 |
P value = 0.00373 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 49 | 52 | 37 |
DEL PEAK 33(XQ11.2) MUTATED | 7 | 4 | 12 | 0 |
DEL PEAK 33(XQ11.2) WILD-TYPE | 38 | 45 | 40 | 37 |
P value = 0.00164 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 25 | 20 | 15 | 23 |
DEL PEAK 33(XQ11.2) MUTATED | 10 | 0 | 0 | 0 | 3 |
DEL PEAK 33(XQ11.2) WILD-TYPE | 29 | 25 | 20 | 15 | 20 |
P value = 0.03 (Fisher's exact test), Q value = 0.079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 26 | 43 | 39 | 30 |
DEL PEAK 33(XQ11.2) MUTATED | 8 | 2 | 8 | 3 | 0 |
DEL PEAK 33(XQ11.2) WILD-TYPE | 31 | 24 | 35 | 36 | 30 |
P value = 0.0199 (Fisher's exact test), Q value = 0.061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 74 | 75 | 28 |
DEL PEAK 33(XQ11.2) MUTATED | 5 | 15 | 1 |
DEL PEAK 33(XQ11.2) WILD-TYPE | 69 | 60 | 27 |
P value = 0.0167 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 52 | 47 | 25 | 31 | 22 |
DEL PEAK 33(XQ11.2) MUTATED | 10 | 3 | 1 | 7 | 0 |
DEL PEAK 33(XQ11.2) WILD-TYPE | 42 | 44 | 24 | 24 | 22 |
P value = 0.0226 (Fisher's exact test), Q value = 0.065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 102 | 42 | 33 |
DEL PEAK 33(XQ11.2) MUTATED | 18 | 2 | 1 |
DEL PEAK 33(XQ11.2) WILD-TYPE | 84 | 40 | 32 |
P value = 0.0214 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 27 | 11 | 27 | 13 | 51 | 27 | 17 |
DEL PEAK 33(XQ11.2) MUTATED | 1 | 3 | 2 | 0 | 12 | 1 | 1 |
DEL PEAK 33(XQ11.2) WILD-TYPE | 26 | 8 | 25 | 13 | 39 | 26 | 16 |
P value = 0.0161 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 23 | 44 | 19 | 53 | 26 | 8 |
DEL PEAK 33(XQ11.2) MUTATED | 3 | 11 | 2 | 3 | 0 | 1 |
DEL PEAK 33(XQ11.2) WILD-TYPE | 20 | 33 | 17 | 50 | 26 | 7 |
-
Copy number data file = all_lesions.txt from GISTIC pipeline
-
Processed Copy number data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/PAAD-TP/22533736/transformed.cor.cli.txt
-
Molecular subtype file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/PAAD-TP/22541963/PAAD-TP.transferedmergedcluster.txt
-
Number of patients = 184
-
Number of significantly focal cnvs = 56
-
Number of molecular subtypes = 10
-
Exclude genes that fewer than K tumors have alterations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.