Clinical Features	CN_CNMF		METHLYATION_CNMF		RPPA_CNMF		RPPA_CHIERARCHICAL		MRNASEQ_CNMF		MRNASEQ_CHIERARCHICAL		MIRSEQ_CNMF		MIRSEQ_CHIERARCHICAL		MIRSEQ_MATURE_CNMF		MIRSEQ_MATURE_CHIERARCHICAL	
	nMutated (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
TP53	85 (34%)	162	3e-04	0.00527	9.9999e-06	0.00085	0.0054699	0.0595	0.056709	0.284	0.00038	0.00587	0.00013	0.00316	0.0055199	0.0595	4e-05	0.0017	0.00031	0.00527	0.0061499	0.0615
RB1	24 (10%)	223	0.00024	0.0051	0.00261	0.0341	0.079549	0.323	0.38205	0.714	0.00051999	0.00737	0.0096399	0.0819	9.9999e-06	0.00085	5.9999e-05	0.0017	0.0067899	0.0641	4e-05	0.0017
ATRX	36 (15%)	211	5.9999e-05	0.0017	0.3606	0.703	0.059899	0.289	0.55498	0.858	0.3987	0.721	0.092619	0.328	0.24543	0.596	0.44444	0.767	0.43879	0.767	0.01415	0.1
NUMBL	8 (3%)	239	0.95681	1	0.24378	0.596	0.95277	1	0.082369	0.326	0.53101	0.842	0.28851	0.621	0.57786	0.862	0.27305	0.618	0.29701	0.631	0.12106	0.396
MSH3	7 (3%)	240	0.76636	1	0.66233	0.896	1	1	0.82543	1	0.88636	1	0.062969	0.289	0.75013	0.989	0.53974	0.842	0.49238	0.813	0.21472	0.564
LTBP3	5 (2%)	242	0.12995	0.408	0.49529	0.813	0.28419	0.619	0.87743	1	0.2188	0.564	0.16627	0.464	0.075079	0.319	0.18032	0.487	0.16929	0.464	0.090979	0.328
EOMES	5 (2%)	242	0.92375	1	1	1	0.8852	1	0.26779	0.618	1	1	1	1	0.2798	0.618	0.27101	0.618	0.83887	1	1	1
PTEN	7 (3%)	240	0.01893	0.12	0.33108	0.678	1	1	0.66801	0.896	0.13188	0.408	0.26945	0.618	0.21889	0.564	0.30493	0.64	0.57827	0.862	0.03893	0.221
KRTAP5-5	7 (3%)	240	1	1	0.01186	0.096	0.27966	0.618	0.01335	0.0987	0.062509	0.289	0.10018	0.341	0.098559	0.341	0.086199	0.328	0.079749	0.323	0.071369	0.316
CABLES1	3 (1%)	244	1	1	0.32756	0.678	0.33926	0.679	0.57129	0.862	0.16663	0.464	0.80002	1	0.61039	0.88	1	1	NA	NA	NA	NA
TRAF7	4 (2%)	243	0.90566	1	0.66942	0.896	0.67467	0.896	0.15187	0.445	0.37599	0.711	0.16571	0.464	1	1	1	1	0.01689	0.115	0.051069	0.263
LOR	6 (2%)	241	0.072419	0.316	0.13171	0.408	0.01913	0.12	0.03517	0.214	0.66337	0.896	0.45845	0.772	0.14348	0.436	0.15028	0.445	NA	NA	NA	NA
R3HDM1	4 (2%)	243	0.39655	0.721	0.66817	0.896	0.4483	0.767	0.41505	0.743	0.37643	0.711	0.23551	0.596	0.80358	1	0.36372	0.703	NA	NA	NA	NA
NF1	9 (4%)	238	0.090849	0.328	0.04441	0.236	0.25033	0.599	0.0055999	0.0595	0.088839	0.328	0.0079199	0.0709	1	1	0.87124	1	0.03705	0.217	0.01266	0.0978
COL4A3	4 (2%)	243	0.04249	0.233	0.52853	0.842	0.33929	0.679	0.62991	0.885	0.58708	0.868	0.57154	0.862	0.53279	0.842	0.38778	0.717	1	1	0.94197	1
MEGF9	3 (1%)	244	0.59358	0.87	0.62695	0.885	NA	NA	NA	NA	0.79319	1	0.93181	1	0.80379	1	0.80659	1	0.53495	0.842	1	1
SCAP	3 (1%)	244	0.11524	0.384	0.78807	1	0.45142	0.767	0.34398	0.68	0.61322	0.88	0.61608	0.88	0.42565	0.754	0.24015	0.596	0.49707	0.813	0.67359	0.896