GS SIZE SOURCE ES NES NOM p-val FDR q-val FWER p-val Tag % Gene % Signal FDR (median) glob.p.val KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY 61 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY 0.66879 1.8307 0.002032 0.34061 0.505 0.344 0.0808 0.318 0.071018 0.08 KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY 42 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY 0.66151 1.8065 0.004057 0.29653 0.565 0.262 0.0592 0.247 0.068383 0.072 BIOCARTA_HIVNEF_PATHWAY 58 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_HIVNEF_PATHWAY 0.48806 1.9962 0.007874 0.17823 0.187 0.5 0.266 0.368 0 0.037 BIOCARTA_PYK2_PATHWAY 28 http://www.broadinstitute.org/gsea/msigdb/cards/BIOCARTA_PYK2_PATHWAY 0.45068 1.7954 0.01636 0.30042 0.583 0.286 0.139 0.246 0.069638 0.077 ST_TUMOR_NECROSIS_FACTOR_PATHWAY 28 http://www.broadinstitute.org/gsea/msigdb/cards/ST_TUMOR_NECROSIS_FACTOR_PATHWAY 0.55363 1.7615 0.02495 0.33835 0.67 0.714 0.266 0.525 0.099344 0.086 ST_INTERLEUKIN_4_PATHWAY 26 http://www.broadinstitute.org/gsea/msigdb/cards/ST_INTERLEUKIN_4_PATHWAY 0.62689 1.8778 0.002123 0.29567 0.395 0.5 0.22 0.391 0 0.067 PID_TNFPATHWAY 46 http://www.broadinstitute.org/gsea/msigdb/cards/PID_TNFPATHWAY 0.47556 1.8264 0.01383 0.32149 0.513 0.5 0.269 0.367 0.067188 0.077 PID_P53DOWNSTREAMPATHWAY 134 http://www.broadinstitute.org/gsea/msigdb/cards/PID_P53DOWNSTREAMPATHWAY 0.48091 1.7708 0.01057 0.33617 0.645 0.299 0.134 0.26 0.090292 0.082 PID_HIVNEFPATHWAY 35 http://www.broadinstitute.org/gsea/msigdb/cards/PID_HIVNEFPATHWAY 0.57865 1.9035 0.008048 0.27831 0.353 0.686 0.266 0.504 0 0.063 PID_CASPASE_PATHWAY 51 http://www.broadinstitute.org/gsea/msigdb/cards/PID_CASPASE_PATHWAY 0.50309 1.9285 0.004057 0.25904 0.296 0.314 0.135 0.272 0 0.057 REACTOME_TRIF_MEDIATED_TLR3_SIGNALING 72 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRIF_MEDIATED_TLR3_SIGNALING 0.44743 1.8672 0.002079 0.28909 0.419 0.278 0.161 0.234 0 0.068 REACTOME_MEMBRANE_TRAFFICKING 123 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MEMBRANE_TRAFFICKING 0.3471 1.813 0.01048 0.30257 0.548 0.504 0.278 0.366 0.067507 0.072 REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING 59 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRANS_GOLGI_NETWORK_VESICLE_BUDDING 0.45981 2.1669 0 0.11751 0.051 0.61 0.297 0.43 0 0.026 REACTOME_METABOLISM_OF_NUCLEOTIDES 70 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_METABOLISM_OF_NUCLEOTIDES 0.51342 2.03 0.002066 0.16591 0.153 0.314 0.147 0.269 0 0.033 REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS 52 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_GOLGI_ASSOCIATED_VESICLE_BIOGENESIS 0.46206 2.0832 0.007921 0.17108 0.102 0.654 0.297 0.461 0 0.035 REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN 28 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN 0.63474 2.2706 0 0.089885 0.026 0.607 0.252 0.455 0 0.022 REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS 80 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS 0.42504 1.8232 0.0481 0.30324 0.52 0.575 0.35 0.375 0.065896 0.075 REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT 25 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT 0.47844 1.7408 0.02222 0.36913 0.718 0.72 0.351 0.468 0.11326 0.097 REACTOME_NOD1_2_SIGNALING_PATHWAY 30 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_NOD1_2_SIGNALING_PATHWAY 0.67922 2.0744 0 0.14041 0.106 0.267 0.0509 0.254 0 0.032 REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS 45 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS 0.60655 1.7362 0.02062 0.36245 0.731 0.244 0.0525 0.232 0.11472 0.098