GISTIC identifies genomic regions that are significantly gained or

lost across a set of tumors. The pipeline first filters out normal

samples from the segmented copy-number data by inspecting the TCGA

There were 51 tumor samples used in this analysis:  32 significant arm-level results, 23 significant focal amplifications, and 16 significant focal deletions were found.

Q value (bottom). The green line represents the significance

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 14q13.3.

Genes in bold are cancer genes as defined by  <a href="http://www.sanger.ac.uk/genetics/CGP/Census/">The Sanger Institute: Cancer Gene Census</a>

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 20q13.2.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 8q22.2.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 12p11.21.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 21p12.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 8q24.3.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 7p11.2.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for Xq25.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 20q13.33.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 21q11.2.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 5p15.33.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 1q21.3.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 19q12.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 1p36.32.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 5q35.3.