Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	11LU013_TP	11LU016_TP	11LU022_TP	C3L-00001_TP	C3L-00093_TP	C3L-00422_TP	C3L-00604_TP	C3L-00973_TP	C3N-00167_TP	C3N-00223_TP	C3N-00433_TP	C3N-00550_TP	C3N-00552_TP	C3N-00556_TP	C3N-00559_TP	C3N-00572_TP	C3N-00574_TP	C3N-00579_TP	C3N-01021_TP	C3N-01023_TP	C3N-01024_TP	C3N-01030_TP	C3N-01072_TP	C3N-01074_TP	C3N-01405_TP	C3N-01410_TP	C3N-01413_TP	C3N-01414_TP	C3N-01415_TP	C3N-01416_TP	C3N-01489_TP	C3N-01823_TP	C3N-01842_TP	C3N-02000_TP	C3N-02002_TP	C3N-02087_TP	C3N-02089_TP	C3N-02145_TP	C3N-02158_TP	C3N-02379_TP	C3N-02422_TP	C3N-02433_TP	C3N-02529_TP	C3N-02572_TP	C3N-02587_TP	C3N-02729_TP	
Amplification Peak  1	4q12    	chr4:54400001-54590000(probes 64694:64715)      	chr4:54410001-54450000(probes 64695:64699)      	chr4:54350001-54870000(probes 64688:64745)    	0.051384	   0.051384		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	2	0	2	0	0	0	0	0	0	0	0	1	1	0	0	0	1	1	
Amplification Peak  2	5p15.33 	chr5:1020002-1890000(probes 77110:77129)          	chr5:1030001-1300000(probes 77111:77112)          	chr5:1-1950000(probes 77095:77135)                    	0.0069844	  0.0069844		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	2	1	2	1	0	0	1	1	0	0	1	0	1	0	0	1	2	0	1	1	0	0	2	1	1	0	2	2	1	1	2	1	2	1	1	2	0	1	1	1	1	1	1	0	
Amplification Peak  3	6p21.1  	chr6:41530002-42000000(probes 97079:97132)      	chr6:41650001-41800000(probes 97094:97109)      	chr6:41540001-42019999(probes 97080:97134)    	0.068173	   0.068173		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	1	0	1	0	1	0	0	1	0	1	1	0	2	1	0	0	0	1	0	1	0	0	1	0	1	1	1	1	0	1	0	1	0	0	0	1	2	0	1	1	0	1	
Amplification Peak  4	7p11.2  	chr7:54020001-55520000(probes 113615:113770)    	chr7:54630001-55130000(probes 113676:113725)    	chr7:52930001-56170000(probes 113508:113844)  	2.0751e-06	 2.3229e-06		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	1	1	2	1	0	1	0	2	0	0	2	0	1	2	0	2	1	0	0	0	0	0	0	1	0	1	0	2	1	0	1	0	2	1	1	1	1	0	2	1	1	1	1	0	1	
Amplification Peak  5	7q11.21 	chr7:65770001-65840000(probes 114029:114036)    	chr7:65780001-65830000(probes 114030:114035)    	chr7:65780001-65860000(probes 114030:114038)  	0.14686	    0.23492		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	1	1	1	0	1	0	1	0	0	1	0	1	2	0	2	1	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	1	1	1	1	1	0	2	1	1	1	1	0	1	
Amplification Peak  6	8q13.1  	chr8:65180001-66450000(probes 127595:127727)    	chr8:65560001-66150000(probes 127637:127696)    	chr8:65190001-66670000(probes 127596:127750)  	0.004254	    0.11865		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	0	0	0	2	0	0	1	0	0	0	1	1	0	1	0	1	0	2	1	0	1	2	2	0	2	1	1	0	0	0	1	1	0	1	0	0	0	0	1	1	0	0	1	
Amplification Peak  7	8q24.21 	chr8:128150002-128209999(probes 134124:134130)	chr8:128160001-128200000(probes 134125:134129)	chr8:85650001-145138636(probes 129685:135622)	8.5722e-09	 2.7504e-08		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	1	1	1	0	0	1	0	0	2	0	0	0	1	1	0	2	1	1	0	2	1	2	2	2	1	1	2	1	1	1	0	0	1	1	0	2	0	0	2	0	1	2	0	0	1	
Amplification Peak  8	8q24.3  	chr8:144170001-145138636(probes 135615:135622)	chr8:144180001-145138636(probes 135616:135622)	chr8:85650001-145138636(probes 129685:135622)	4.1335e-05	    0.21688		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	1	0	0	0	2	0	0	2	0	1	1	1	2	1	1	1	1	0	1	1	1	1	2	1	1	2	1	1	1	0	0	1	1	0	2	0	0	0	0	1	2	0	0	1	
Amplification Peak  9	11q13.3 	chr11:68860001-70350000(probes 163307:163461)  	chr11:69840001-69920000(probes 163408:163416)  	chr11:69840001-69950000(probes 163408:163419)	0.23492	    0.23492		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	0	1	0	1	1	0	1	0	0	1	0	0	0	0	1	0	0	1	1	0	0	0	0	2	0	1	1	0	0	1	0	1	1	0	1	0	0	2	0	0	0	0	1	1	
Amplification Peak 10	12p11.22	chr12:29260001-29550000(probes 172180:172207)  	chr12:29270001-29540000(probes 172181:172206)  	chr12:29270001-29570000(probes 172181:172209)	0.090157	   0.090157		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	1	0	0	0	0	0	0	0	0	0	0	1	1	1	0	1	0	0	0	0	0	2	0	0	0	1	0	1	0	2	0	0	0	0	1	1	1	1	2	1	0	0	0	1	
Amplification Peak 11	12q14.1 	chr12:58410001-58480000(probes 174540:174546)  	chr12:58420001-58470000(probes 174541:174545)  	chr12:58420001-58499999(probes 174541:174548)	0.018422	   0.068813		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	1	0	0	0	0	0	0	0	0	0	1	2	0	2	0	0	1	1	0	0	0	1	0	0	1	1	0	0	0	0	1	0	0	1	1	1	0	0	2	1	0	0	0	
Amplification Peak 12	12q15   	chr12:68950001-70860000(probes 175686:175891)  	chr12:69120001-69200000(probes 175706:175714)  	chr12:67880001-70879999(probes 175563:175893)	6.6426e-05	   0.080648		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	1	0	0	0	1	0	0	1	1	2	0	1	0	1	0	0	1	2	1	0	2	2	1	0	0	0	
Amplification Peak 13	13q31.1 	chr13:86200002-86280000(probes 189779:189788)  	chr13:86210001-86260000(probes 189780:189785)  	chr13:86210001-86280000(probes 189780:189788)	0.20803	    0.20803		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	2	0	0	0	0	0	1	0	1	0	0	1	0	0	1	1	1	0	0	0	0	0	1	0	0	1	0	0	0	1	0	1	1	0	0	0	0	1	1	0	1	1	1	
Amplification Peak 14	14q13.3 	chr14:36190002-36400000(probes 195840:195863)  	chr14:36200001-36280000(probes 195841:195849)  	chr14:30340001-38950000(probes 195196:196145)	4.1884e-13	 4.1884e-13		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	2	1	1	1	0	1	0	0	0	0	1	0	0	1	0	2	1	0	2	2	2	0	2	2	2	1	0	0	0	1	2	1	2	2	1	0	2	2	1	1	0	1	1	1	1	
Amplification Peak 15	17q12   	chr17:37750001-83257441(probes 220734:224843)  	chr17:39340001-39860000(probes 220890:220941)  	chr17:39340001-39890000(probes 220890:220944)	0.24437	    0.24437		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	1	1	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	2	1	0	0	1	0	1	1	1	0	1	1	0	1	1	1	0	1	0	1	0	1	2	1	0	1	
Amplification Peak 16	19q13.12	chr19:34220001-40180000(probes 234282:234893)  	chr19:37270001-37310000(probes 234595:234600)  	chr19:36900001-38300000(probes 234556:234702)	0.037252	   0.037252		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	2	0	0	1	0	0	1	0	0	0	1	0	1	0	1	0	0	1	0	1	0	0	2	0	0	0	1	1	2	0	0	0	1	0	0	1	1	0	0	0	0	2	
Amplification Peak 17	20p11.21	chr20:22110001-23599999(probes 238425:238572)  	chr20:22510001-22520000(probes 238469:238470)  	chr20:22120001-23610000(probes 238426:238574)	0.029116	   0.029116		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	2	0	0	1	0	0	0	0	0	0	1	2	0	0	0	1	1	0	1	0	2	0	2	0	0	0	1	0	0	0	
Amplification Peak 18	20q13.31	chr20:57240002-59040000(probes 241484:241681)  	chr20:57730001-57760000(probes 241540:241543)  	chr20:56660001-64444167(probes 241426:242182)	0.00016768	   0.012604		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	1	1	0	0	1	0	1	2	0	1	0	1	1	0	1	2	0	1	2	0	0	0	1	0	1	1	1	0	0	1	1	0	0	0	1	0	2	1	0	2	1	0	0	2	
Amplification Peak 19	20q13.33	chr20:63230002-64444167(probes 242127:242182)  	chr20:63470001-63480000(probes 242156:242157)  	chr20:56660001-64444167(probes 241426:242182)	8.2254e-05	   0.016337		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	1	1	0	0	1	0	1	2	0	1	0	1	1	1	1	2	0	1	1	0	0	0	1	0	1	2	1	0	0	1	1	0	0	0	1	0	2	1	0	2	0	0	0	2	
Amplification Peak 20	21p12   	chr21:6730002-6950000(probes 242910:242937)      	chr21:6790001-6940000(probes 242917:242936)      	chr21:6740001-6969999(probes 242911:242939)    	0.020225	   0.020225		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	1	0	0	2	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	1	0	1	0	0	0	2	1	0	0	0	0	0	0	1	1	0	2	0	2	
Amplification Peak 21	21q11.2 	chr21:10330001-15880000(probes 243371:243558)  	chr21:14560001-14890000(probes 243438:243472)  	chr21:14300001-15899999(probes 243410:243560)	0.068173	   0.068173		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	2	0	0	2	0	0	1	0	0	0	0	1	0	0	1	1	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	1	1	0	2	0	2	
Amplification Peak 22	Yq11.223	chrY:20120001-20180000(probes 264914:264922)    	chrY:20130001-20170000(probes 264915:264921)    	chrY:20060001-20230000(probes 264906:264928)  	0.037252	   0.037252		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	2	0	0	0	0	0	1	2	0	0	1	0	1	2	1	1	1	
Deletion Peak  1	1p21.1  	chr1:67820001-149940000(probes 6230:11240)   	chr1:103510001-105689999(probes 9696:9859)      	chr1:87870001-115450000(probes 8126:10783)       	0.016738	   0.016738		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	1	0	1	1	0	1	0	0	0	0	1	0	1	0	0	1	1	1	1	1	1	0	1	0	1	0	1	0	0	0	0	1	0	1	1	0	0	0	1	1	0	0	1	
Deletion Peak  2	5q23.1  	chr5:1-181538259(probes 77095:93392)                	chr5:117720001-118280000(probes 87238:87292)    	chr5:117980001-118009999(probes 87266:87267)    	0.23273	    0.23273		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	1	1	0	0	0	1	0	0	1	1	1	0	0	1	1	0	0	0	1	1	0	0	1	
Deletion Peak  3	6q27    	chr6:68620002-170805979(probes 99337:108790) 	chr6:170520002-170590000(probes 108774:108782)  	chr6:96970001-170777486(probes 101929:108786)    	0.023815	   0.024037		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	1	0	1	1	0	1	0	0	0	0	1	0	1	1	1	1	1	0	1	1	0	1	1	1	0	0	1	1	0	1	1	1	0	0	0	1	0	1	0	1	1	1	1	
Deletion Peak  4	8p23.1  	chr8:1-38539999(probes 122239:125290)                	chr8:6390002-6570000(probes 122520:122536)          	chr8:80001-36770000(probes 122248:125108)           	0.0078044	  0.0078044		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	1	1	0	0	0	1	1	0	0	0	1	1	0	1	0	1	1	1	1	0	0	1	1	1	0	1	0	1	0	1	1	1	1	1	1	0	1	0	1	1	1	0	1	
Deletion Peak  5	9p23    	chr9:7790001-10630000(probes 136107:136332)    	chr9:8290001-10630000(probes 136147:136332)        	chr9:40002-29740000(probes 135629:138096)           	8.3515e-06	   0.060638		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	1	0	1	1	0	1	1	0	1	0	0	1	1	1	0	1	0	1	1	0	1	1	0	0	0	1	1	1	1	1	1	1	1	0	1	1	1	1	1	1	1	0	0	
Deletion Peak  6	9p21.3  	chr9:21860002-22450000(probes 137357:137424)  	chr9:21950002-22009999(probes 137368:137374)      	chr9:40002-29740000(probes 135629:138096)           	1.0537e-19	 2.4167e-18		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	1	0	1	0	1	1	0	1	0	1	1	1	1	0	1	0	1	1	0	1	1	0	0	0	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	0	1	
Deletion Peak  7	10q26.3 	chr10:1-133797422(probes 145792:157570)            	chr10:133070002-133250000(probes 157528:157546)	chr10:133080002-133110000(probes 157529:157530)	0.24779	    0.26095		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	0	1	1	1	0	0	0	0	0	1	0	0	1	1	1	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	1	1	0	0	0	1	1	0	0	1	1	1	0	1	
Deletion Peak  8	12p13.1 	chr12:30001-122410000(probes 169546:181079)    	chr12:12810001-15019999(probes 170573:170765)    	chr12:12030001-15110000(probes 170495:170777)    	0.075912	   0.081319		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	1	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	1	0	0	1	1	0	0	1	1	1	0	1	0	1	0	0	0	1	0	0	
Deletion Peak  9	13q11   	chr13:1-24170000(probes 181815:184089)              	chr13:18190001-18250000(probes 183664:183672)    	chr13:18060001-55280000(probes 183649:186904)    	4.5167e-05	 4.5167e-05		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	0	0	0	1	1	0	0	1	1	1	1	1	1	1	1	1	1	0	0	1	1	0	1	1	1	1	1	1	0	1	1	1	1	0	1	1	1	0	0	1	0	0	
Deletion Peak 10	15q12   	chr15:1-74480000(probes 202526:209094)              	chr15:26840001-30850000(probes 204824:204930)    	chr15:26880001-28299999(probes 204827:204927)    	0.11642	    0.11216		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	0	1	1	0	0	0	0	0	1	1	1	1	1	1	1	1	1	1	0	0	1	1	1	1	1	1	0	1	1	1	1	1	1	1	1	0	0	1	1	0	0	1	
Deletion Peak 11	17p13.2 	chr17:130002-21079999(probes 217622:219293)    	chr17:5270001-5400000(probes 217992:218005)        	chr17:120001-22750000(probes 217619:219328)        	4.3049e-05	 4.3049e-05		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	1	1	0	1	1	0	0	1	1	1	1	1	0	1	0	1	1	1	1	1	1	0	1	0	1	1	1	0	1	1	1	1	0	1	0	1	0	0	1	1	0	1	
Deletion Peak 12	18p11.32	chr18:1-21250000(probes 224844:226105)              	chr18:2-910000(probes 224845:224851)                  	chr18:340002-900000(probes 224849:224850)            	0.20889	    0.21056		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	0	1	1	0	1	1	0	1	1	0	1	0	0	0	0	0	1	0	1	0	1	1	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	1	1	0	0	0	
Deletion Peak 13	18q22.2 	chr18:24710002-80373285(probes 226467:231475)	chr18:68670001-74819999(probes 230696:231042)    	chr18:41510001-80287934(probes 228162:231465)    	0.024186	   0.024037		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	1	0	1	1	0	1	1	0	1	1	1	1	1	1	0	0	0	1	1	0	0	1	1	1	0	1	1	1	0	0	1	1	0	0	1	1	0	0	1	0	0	0	1	
Deletion Peak 14	19q13.33	chr19:38920001-58617616(probes 234770:236429)	chr19:47830001-47960000(probes 235588:235600)    	chr19:45620001-51040000(probes 235363:235887)    	0.11009	    0.11216		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	1	1	0	0	1	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	1	1	0	1	0	1	1	1	0	1	0	1	0	1	
Deletion Peak 15	20p12.3 	chr20:1-21709999(probes 236430:238376)              	chr20:8090002-8899999(probes 237104:237138)        	chr20:8740002-8769999(probes 237122:237123)        	0.1248	    0.12672		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	1	0	1	0	0	0	0	0	1	1	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	1	1	0	1	1	0	0	1	1	0	1	
Deletion Peak 16	21p12   	chr21:1-46709983(probes 242183:246429)              	chr21:6840002-6869999(probes 242925:242926)        	chr21:6590001-7220000(probes 242891:242973)        	0.023492	          1		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	1	1	1	0	1	1	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 17	21p11.2 	chr21:7820002-8989999(probes 243046:243199)    	chr21:8430001-8459999(probes 243124:243126)        	chr21:7960001-8709999(probes 243066:243164)        	9.209e-05	   0.010657		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	0	0	0	1	1	1	0	1	1	0	1	1	0	1	1	0	1	1	1	1	1	1	1	0	1	1	0	1	0	0	1	1	1	1	0	0	1	0	0	0	1	0	1	
Deletion Peak 18	21q11.2 	chr21:1-46709983(probes 242183:246429)              	chr21:10330001-13999999(probes 243371:243375)    	chr21:8890001-25520000(probes 243190:244449)      	1.5077e-05	    0.77535		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	1	0	1	1	0	1	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 19	21q11.2 	chr21:8980001-25569999(probes 243200:244454)  	chr21:10330001-13999999(probes 243371:243375)    	chr21:8890001-25520000(probes 243190:244449)      	1.5077e-05	   0.024037		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	1	0	1	1	0	1	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 20	22p11.2 	chr22:10960001-16939999(probes 247540:248056)	chr22:11880002-11960000(probes 247664:247674)    	chr22:11730001-12009999(probes 247642:247681)    	0.014818	   0.014818		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	0	0	1	0	1	1	0	1	1	0	0	1	0	0	1	0	1	0	0	0	1	0	1	0	1	1	0	0	0	0	0	1	1	0	0	0	0	0	0	1	1	0	0	
Deletion Peak 21	Xp22.33 	chrX:1-150910000(probes 250604:262501)              	chrX:250001-3249999(probes 250638:250639)            	chrX:1-3269999(probes 250604:250641)                      	0.014932	   0.014932		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	0	0	0	1	0	1	1	1	0	0	1	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	1	0	1	0	0	0	
Deletion Peak 22	Yq11.23 	chrY:9900002-57227415(probes 263806:268693)    	chrY:23200002-24920000(probes 265254:265441)      	chrY:23140001-23309999(probes 265246:265267)      	0.060638	   0.060638		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	1	1	0	1	1	1	1	1	1	1	1	0	1	1	1	1	0	1	1	1	1	0	1	1	0	0	1	1	1	0	1	0	0	1	0	0	0	0	1	0	0	0	
Amplification Peak  1 - CN values	4q12    	chr4:54400001-54590000(probes 64694:64715)      	chr4:54410001-54450000(probes 64695:64699)      	chr4:54350001-54870000(probes 64688:64745)    	0.051384	   0.051384		Actual Copy Change Given	0.041771	-0.020956	0.011377	0	-0.00019875	0.0024753	0.083207	0	-0.040894	-0.010739	0.009914	0.0034828	-0.0091852	0.061366	-0.39119	-0.29396	-0.24088	-0.00098257	-0.021869	0.056869	0.13257	0.0028567	0.050491	0.34157	0.44444	-0.0023971	-0.086433	-0.0027671	3.6569	-0.19957	3.4546	-0.10459	-0.46066	-0.079979	-0.39837	0.096741	-0.16736	0.014727	0	0.40944	0.58403	0.018142	0.023565	0.086358	0.48258	0.39912	
Amplification Peak  2 - CN values	5p15.33 	chr5:1020002-1890000(probes 77110:77129)          	chr5:1030001-1300000(probes 77111:77112)          	chr5:1-1950000(probes 77095:77135)                    	0.0069844	  0.0069844		Actual Copy Change Given	0.19691	0.11672	1.0462	0.48626	2.6594	0.46538	-0.022074	0.02736	0.39905	0.10868	0.0089496	0.028035	0.34883	0.049731	0.16199	0.041599	0.09499	0.3354	1.4567	0.019534	0.18784	0.45853	0.0030788	-0.24227	1.3519	0.25152	0.27834	-0.0058359	1.0935	1.1617	0.6326	0.14402	1.3449	0.18725	0.91236	0.34965	0.20302	2.9851	-0.0081277	0.6665	0.68983	0.16828	0.50755	0.80071	0.48797	0.026204	
Amplification Peak  3 - CN values	6p21.1  	chr6:41530002-42000000(probes 97079:97132)      	chr6:41650001-41800000(probes 97094:97109)      	chr6:41540001-42019999(probes 97080:97134)    	0.068173	   0.068173		Actual Copy Change Given	0.061753	-0.14298	0.0020559	-0.0026104	0.32569	-0.43835	0.3123	-0.0057832	0.18128	0.015788	0.096518	0.29234	0.0088165	0.18359	0.68043	0.0062571	3.6569	0.3365	0.031075	0.028497	0	0.29002	-0.022336	0.35605	0.067737	0.031526	0.29214	-0.21106	0.19136	0.11064	0.71021	0.8871	0.0090217	0.16307	0.0033657	0.31231	0.055094	0.031888	-0.24039	0.30862	2.0205	0.02258	0.25586	0.15636	-0.002722	0.38512	
Amplification Peak  4 - CN values	7p11.2  	chr7:54020001-55520000(probes 113615:113770)    	chr7:54630001-55130000(probes 113676:113725)    	chr7:52930001-56170000(probes 113508:113844)  	2.0751e-06	 2.3229e-06		Actual Copy Change Given	3.6569	0.62123	0.17501	3.6569	0.40728	0.029956	0.55719	0.006625	1.0574	0.033251	0.073084	1.3105	0.0060196	0.11518	3.6569	0.062313	3.6569	0.34401	0.075418	-0.011187	-0.17001	0.0056157	0.045744	0.024206	0.4556	-0.025471	0.37382	-0.23086	1.8839	0.46261	0.036263	0.33255	0	1.002	0.3307	0.58081	0.22459	0.39148	0.015445	3.6569	0.51406	0.56293	0.59434	0.48008	0.0017013	0.38776	
Amplification Peak  5 - CN values	7q11.21 	chr7:65770001-65840000(probes 114029:114036)    	chr7:65780001-65830000(probes 114030:114035)    	chr7:65780001-65860000(probes 114030:114038)  	0.14686	    0.23492		Actual Copy Change Given	0.31754	0.41605	0.24052	0.73264	0.3286	0.017434	0.54619	0.0058784	0.18011	-0.0018434	0.056039	0.71765	0.0016064	0.161	2.3469	-0.013009	2.6876	0.34916	0.077892	-0.0092631	-0.10827	-0.46394	0.035321	0.039532	0.49824	0.012352	0.39118	0.010287	0.4433	0.018009	0.047656	-0.21996	0.02619	0.21036	0.30371	0.28971	0.15703	0.42186	0.01888	2.0555	0.52242	0.20682	0.63855	0.16997	0.00016992	0.40034	
Amplification Peak  6 - CN values	8q13.1  	chr8:65180001-66450000(probes 127595:127727)    	chr8:65560001-66150000(probes 127637:127696)    	chr8:65190001-66670000(probes 127596:127750)  	0.004254	    0.11865		Actual Copy Change Given	0.37914	-0.037509	-0.27312	-0.0035628	0	0	3.6549	0.021446	-0.055008	0.14168	-0.014029	-0.021487	-0.0056924	0.22286	0.62586	0.030505	0.35165	-0.010248	0.44833	-0.0036745	2.9506	0.49725	-0.020665	0.60824	0.92998	1.8033	-0.10498	1.2178	0.41176	0.12376	-0.096572	0	0.0034856	0.54493	0.46567	0	0.51264	0.075725	0.023562	-0.13388	0.028079	0.25741	0.64924	-0.13709	-0.0023603	0.39555	
Amplification Peak  7 - CN values	8q24.21 	chr8:128150002-128209999(probes 134124:134130)	chr8:128160001-128200000(probes 134125:134129)	chr8:85650001-145138636(probes 129685:135622)	8.5722e-09	 2.7504e-08		Actual Copy Change Given	3.6569	0.49564	0.38044	0.45376	0	0.014843	0.33523	0.021446	-0.055008	3.0451	-0.014029	-0.021487	-0.0039792	0.36057	0.85063	0.030505	3.6569	0.78991	0.44833	0	2.6484	0.4891	1.4601	0.98536	0.96572	0.39308	0.15122	2.6786	0.35851	0.12376	0.35623	0	-0.45277	0.5687	0.48462	0	0.96214	0.099517	0.023562	2.1611	0.02548	0.25403	1.4147	-0.13709	-0.0023603	0.39555	
Amplification Peak  8 - CN values	8q24.3  	chr8:144170001-145138636(probes 135615:135622)	chr8:144180001-145138636(probes 135616:135622)	chr8:85650001-145138636(probes 129685:135622)	4.1335e-05	    0.21688		Actual Copy Change Given	0.11545	-0.025363	0.39445	-0.022528	0	0.014843	3.6569	0.021446	-0.055008	0.9212	-0.014029	0.14768	0.24499	0.36057	1.2071	0.24698	0.3469	0.78991	0.44833	0	0.1632	0.4891	0.41298	0.58122	0.96572	0.39308	0.15122	1.6412	0.35851	0.12376	0.36204	0	-0.029585	0.5687	0.75583	0	0.91304	0.099517	0.023562	-0.38562	0.02548	0.51141	0.9463	0.027699	-0.0023603	0.39555	
Amplification Peak  9 - CN values	11q13.3 	chr11:68860001-70350000(probes 163307:163461)  	chr11:69840001-69920000(probes 163408:163416)  	chr11:69840001-69950000(probes 163408:163419)	0.23492	    0.23492		Actual Copy Change Given	0.067106	0.18455	-0.01995	0.23973	0.03011	0.46961	0.31206	0.0025898	0.20451	0.0053823	-0.036808	0.49754	0.048122	-0.070495	-0.16075	0.060617	0.49467	-0.064426	0.0061879	0.37023	0.18705	0.032133	-0.028872	0.042472	0.031256	1.7049	-0.069919	0.23427	0.35603	0	-0.12175	0.20578	0.010523	0.25511	0.27953	-0.011589	0.37768	-0.2448	0.0066128	3.6569	-0.006101	0.00072389	-0.14956	-0.063059	0.49022	0.3555	
Amplification Peak 10 - CN values	12p11.22	chr12:29260001-29550000(probes 172180:172207)  	chr12:29270001-29540000(probes 172181:172206)  	chr12:29270001-29570000(probes 172181:172209)	0.090157	   0.090157		Actual Copy Change Given	0.36178	0.12266	0.71645	-0.2419	-0.26263	-0.44354	-0.0052684	0.0098793	0.055156	0	0.021885	-0.013149	0.082463	0.1534	0.38448	0.47659	-0.023475	0.29227	0.0050422	-0.020332	-0.45495	-0.15781	0.0039906	3.6569	-0.22957	0.0015354	-0.069461	0.46485	-0.0061878	0.12275	-0.16669	1.3139	-0.036922	0.052539	0.077121	-0.12227	0.24205	0.19552	0.23123	0.18784	2.9622	0.38398	0.011342	-0.39014	-0.0017725	0.58653	
Amplification Peak 11 - CN values	12q14.1 	chr12:58410001-58480000(probes 174540:174546)  	chr12:58420001-58470000(probes 174541:174545)  	chr12:58420001-58499999(probes 174541:174548)	0.018422	   0.068813		Actual Copy Change Given	0.3668	-0.0839	0.00098242	0.74337	0.017265	-0.43853	-0.010121	-0.0093713	0.081098	-0.0011816	-0.014083	-0.052293	0.084561	0.30232	3.6569	-0.2832	3.6569	-0.064056	0.0075738	0.25611	0.21152	-0.20557	0.023232	0.010169	0.2577	0.027426	-0.084636	0.48102	0.20269	-0.15273	0.033422	-0.095236	-0.035622	0.12013	-0.09717	0.058951	0.28956	0.24614	0.23014	-0.029256	-0.39509	1.5372	0.2479	-0.38945	-0.065518	-0.23128	
Amplification Peak 12 - CN values	12q15   	chr12:68950001-70860000(probes 175686:175891)  	chr12:69120001-69200000(probes 175706:175714)  	chr12:67880001-70879999(probes 175563:175893)	6.6426e-05	   0.080648		Actual Copy Change Given	0.3668	-0.0839	0.00098242	1.7635	0.017265	-0.43853	-0.010121	-0.018666	0.081098	-0.0011816	-0.014083	-0.052293	0.084413	0.063394	3.6569	-0.2832	-0.038843	-0.064056	0.0075738	0.25611	0.21152	-0.20557	0.023232	0.010169	0.2577	0.014112	-0.084636	0.48102	0.44817	3.6569	0.033422	0.56931	-0.055679	0.12013	-0.09717	0.058951	0.29939	1.7775	0.23014	-0.029256	1.9552	2.2936	0.2479	-0.38945	-0.065518	-0.22218	
Amplification Peak 13 - CN values	13q31.1 	chr13:86200002-86280000(probes 189779:189788)  	chr13:86210001-86260000(probes 189780:189785)  	chr13:86210001-86280000(probes 189780:189788)	0.20803	    0.20803		Actual Copy Change Given	0.067514	0.015097	-0.048996	0.96644	-0.016129	0.0066449	-0.012047	-0.22532	-0.2604	0.16757	-0.041609	0.38427	-0.32754	-0.26111	0.86697	0.025161	-0.03483	0.27231	0.65947	0.29524	0.070156	-0.45783	0	-0.10465	-0.2364	0.421	-0.20709	-0.025159	0.58239	-0.21249	-0.16921	-0.060611	0.42148	-0.18149	0.10666	0.36814	-0.24612	-0.019651	-0.28923	-0.35043	0.16237	0.66485	-0.40834	0.11938	0.62825	0.39977	
Amplification Peak 14 - CN values	14q13.3 	chr14:36190002-36400000(probes 195840:195863)  	chr14:36200001-36280000(probes 195841:195849)  	chr14:30340001-38950000(probes 195196:196145)	4.1884e-13	 4.1884e-13		Actual Copy Change Given	1.1746	1.218	0.20897	0.49294	0.28202	0.0047995	0.39401	-0.21695	0.083762	0.011665	-0.037509	0.60145	-0.0063804	0.06806	0.58108	0	1.1577	0.34071	-0.019455	3.2372	3.3405	1.1326	0.025524	1.0094	2.5536	2.8308	0.41225	-0.0077285	0.094622	0.067709	0.37203	2.5364	0.46422	2.5198	1.3922	0.77545	-0.18255	3.6569	3.6569	0.72179	0.46896	0.077799	0.27082	0.19521	0.48433	0.28366	
Amplification Peak 15 - CN values	17q12   	chr17:37750001-83257441(probes 220734:224843)  	chr17:39340001-39860000(probes 220890:220941)  	chr17:39340001-39890000(probes 220890:220944)	0.24437	    0.24437		Actual Copy Change Given	-0.053613	0.12759	0.24854	0.23909	0.33093	-0.42847	-0.050615	0.0086933	0.35293	0.010008	0.031474	0.29144	0.025686	0.077037	-0.13616	-0.022485	0.047992	-0.002229	0.029502	-0.034968	3.6569	0.33497	-0.01175	0.03752	0.31783	0.014475	0.29545	0.46628	0.23446	0.018581	0.18499	0.30821	0.02469	0.14015	0.57935	0.20048	0.056861	0.36307	0.015705	0.31146	-0.012175	0.42295	0.96808	0.24121	-0.0030078	0.3674	
Amplification Peak 16 - CN values	19q13.12	chr19:34220001-40180000(probes 234282:234893)  	chr19:37270001-37310000(probes 234595:234600)  	chr19:36900001-38300000(probes 234556:234702)	0.037252	   0.037252		Actual Copy Change Given	-0.043854	-0.12316	-0.023596	-0.011991	2.1509	-0.41209	-0.00055567	0.23942	0.013795	0.017914	0.24897	0	0.01861	-0.097127	0.10248	0.042293	0.29559	-0.030591	0.26393	-0.011254	-0.6981	0.26139	-0.13669	0.2836	-0.18581	0.041493	1.0923	-0.19651	-0.10115	0.063919	0.11171	0.1012	2.1253	-0.22848	0.011767	0.052268	0.14897	-0.22452	-0.2608	0.55389	0.37005	0.0094309	-0.15225	-0.0344	-0.0025335	2.3395	
Amplification Peak 17 - CN values	20p11.21	chr20:22110001-23599999(probes 238425:238572)  	chr20:22510001-22520000(probes 238469:238470)  	chr20:22120001-23610000(probes 238426:238574)	0.029116	   0.029116		Actual Copy Change Given	-0.025871	0.091632	-0.25772	-0.24891	0.033986	-0.13715	0.32301	0.007192	-0.086543	-0.0040881	-0.089056	-0.046389	-0.35953	0.11247	0.46082	0.055184	0.95898	-0.00022198	0.013543	0.31933	0.074183	0.028215	0.055199	-0.15855	0.0088878	0.0067919	0.11602	2.4129	0.070858	0.076122	0.065572	0.46062	0.66802	-0.44527	0.11827	-0.15021	2.0835	0.023114	3.6569	-0.37128	-0.019677	0.040264	0.50115	-0.29058	-0.0086313	-0.21482	
Amplification Peak 18 - CN values	20q13.31	chr20:57240002-59040000(probes 241484:241681)  	chr20:57730001-57760000(probes 241540:241543)  	chr20:56660001-64444167(probes 241426:242182)	0.00016768	   0.012604		Actual Copy Change Given	0.37818	0.17056	0.60199	0.23588	0.041666	-0.11964	0.31718	0.0045908	0.4921	1.8321	0.074378	0.2813	-0.35004	0.21468	0.49434	-0.30968	0.81366	0.96581	0.0053247	0.25204	1.2404	-0.45107	0.039126	-0.15717	0.45384	0.020956	0.24661	0.87768	0.16963	0.092156	0.078869	0.45989	0.23025	0.096836	0.026877	0.0064852	0.24785	0.029483	3.3025	0.31063	-0.022513	3.6569	0.11473	0.030592	-0.0020278	1.1745	
Amplification Peak 19 - CN values	20q13.33	chr20:63230002-64444167(probes 242127:242182)  	chr20:63470001-63480000(probes 242156:242157)  	chr20:56660001-64444167(probes 241426:242182)	8.2254e-05	   0.016337		Actual Copy Change Given	0.74717	0.17056	0.1422	0.23588	0.041666	-0.11964	0.31718	0.0045908	0.26972	3.6569	0.074378	0.58975	-0.35004	0.21468	0.49434	0.37616	0.81366	0.96581	0.0053247	0.25204	0.83319	-0.45107	0.039126	-0.15717	0.45384	0.020956	0.24661	1.9854	0.16963	0.092156	0.078869	0.45989	0.6699	0.096836	0.026877	0.0064852	0.76131	0.029483	2.6453	0.63822	-0.022513	1.0809	0.027484	0.030592	-0.0020278	1.1745	
Amplification Peak 20 - CN values	21p12   	chr21:6730002-6950000(probes 242910:242937)      	chr21:6790001-6940000(probes 242917:242936)      	chr21:6740001-6969999(probes 242911:242939)    	0.020225	   0.020225		Actual Copy Change Given	-0.26686	-0.22111	-0.23725	0.69345	-0.043867	-0.057466	3.6569	-0.044971	-0.18241	0.042212	0.014983	-0.48298	-0.0062987	-0.068614	0.44563	-0.091106	-0.29524	0.24327	-0.049748	-0.0027073	-1.0669	-0.17118	-0.45351	0.42685	-0.40655	-0.29438	0.23867	-0.24522	0.1832	0.093914	0.045982	-0.051509	0.90333	0.18683	-0.34157	-0.093575	0.04533	0.010904	-0.015657	-0.2245	0.43324	0.26282	-0.099188	1.1091	0.037987	1.1213	
Amplification Peak 21 - CN values	21q11.2 	chr21:10330001-15880000(probes 243371:243558)  	chr21:14560001-14890000(probes 243438:243472)  	chr21:14300001-15899999(probes 243410:243560)	0.068173	   0.068173		Actual Copy Change Given	-0.035767	-0.15635	-0.12771	2.1671	-0.029513	0.0063588	3.6567	-0.0098066	-0.015533	0.28615	0.0088471	-0.17948	-0.0097107	-0.076313	0.42555	-0.058008	-0.14133	0.34094	0.20402	-0.031555	-1.0897	-0.0019894	-0.42945	0.2853	-0.45838	-0.34486	0.018482	-0.17658	0.11586	-0.0049342	0.051311	-0.15758	0.8951	-0.072579	-0.25279	0.1722	-0.4568	-0.021449	-0.028746	-0.3442	0.33675	0.135	0.062543	1.5523	-0.012753	1.0593	
Amplification Peak 22 - CN values	Yq11.223	chrY:20120001-20180000(probes 264914:264922)    	chrY:20130001-20170000(probes 264915:264921)    	chrY:20060001-20230000(probes 264906:264928)  	0.037252	   0.037252		Actual Copy Change Given	0.81666	0.074886	-0.68955	0.025578	-0.80937	-0.33859	2.126	-0.60494	-0.82396	-0.31738	-0.18298	-0.86041	-0.72334	-0.60756	-0.13957	0.056669	-0.10368	-0.7239	-0.86885	-0.62761	0.36579	-0.58221	-0.83168	-0.48141	-0.70424	0.73664	-0.4909	-0.97135	-0.0029373	1.8881	-0.17901	-0.61403	-0.91409	0.040966	-1.0087	0.33179	1.3244	-0.19117	0.0036615	0.20507	-0.10979	0.10191	2.1667	0.26455	0.26488	0.35921	
Deletion Peak  1 - CN values	1p21.1  	chr1:67820001-149940000(probes 6230:11240)   	chr1:103510001-105689999(probes 9696:9859)      	chr1:87870001-115450000(probes 8126:10783)       	0.016738	   0.016738		Actual Copy Change Given	-0.26352	-0.068203	-0.25803	-0.24825	0.036562	-0.44552	-0.34982	0.0022955	-0.13492	0.0024062	-0.031946	-0.0019716	9.8227e-05	-0.15018	0.051806	-0.28688	-0.014551	-0.05345	-0.36575	-0.26858	-0.17801	-0.22055	-0.40134	-0.26666	-0.0040178	-0.33266	0.045113	-0.24012	0.11279	-0.20855	-0.036448	-0.081325	0.012454	0.27524	-0.35016	0.10542	-0.19189	-0.3315	0.26196	-0.080861	-0.0063529	-0.43742	-0.23476	0.092253	-0.0020922	-0.42163	
Deletion Peak  2 - CN values	5q23.1  	chr5:1-181538259(probes 77095:93392)                	chr5:117720001-118280000(probes 87238:87292)    	chr5:117980001-118009999(probes 87266:87267)    	0.23273	    0.23273		Actual Copy Change Given	-0.31185	-0.33913	-0.042297	0.24585	0.13571	0.47238	-0.0067561	-0.009223	0.2987	0.0064559	0.01721	0.027406	0.36548	-0.15184	-0.0015105	0.073005	0.079574	0.34678	-0.34191	-0.0036409	0.096009	-0.22759	0.023392	-0.32992	-0.19705	-0.054784	0.014668	0.010534	-0.20947	0.091165	0.042242	-0.10392	-0.45251	-0.28239	0.64939	0.14448	-0.18187	-0.29141	0.0078176	0.31531	0.67802	-0.20134	-0.12156	0.42157	0.4866	-0.81496	
Deletion Peak  3 - CN values	6q27    	chr6:68620002-170805979(probes 99337:108790) 	chr6:170520002-170590000(probes 108774:108782)  	chr6:96970001-170777486(probes 101929:108786)    	0.023815	   0.024037		Actual Copy Change Given	-0.07748	-0.21877	-0.3088	-0.24844	-0.001941	-0.44396	-0.3334	-0.015042	-0.15835	-0.0067932	-0.089236	-0.091054	-0.0012661	-0.14571	0.358	-0.28257	-0.46009	-0.31915	-0.22158	-0.27752	-0.024358	-0.45268	-0.40918	0	-0.46359	-0.34726	-0.11274	-0.0065497	0.0053825	-0.2099	-0.18072	0.12004	-0.25636	-0.24357	-0.12085	-0.095003	-0.040828	-0.00064887	-0.24798	-0.03495	-0.33083	-0.0010599	-0.2368	-0.11078	-0.49243	-0.42944	
Deletion Peak  4 - CN values	8p23.1  	chr8:1-38539999(probes 122239:125290)                	chr8:6390002-6570000(probes 122520:122536)          	chr8:80001-36770000(probes 122248:125108)           	0.0078044	  0.0078044		Actual Copy Change Given	-0.54916	-0.037648	0.16073	-0.25731	-0.27075	0.0093685	0.30166	-0.016076	-0.45382	-0.32856	-0.095795	-0.073938	0.0012383	-0.41359	-0.28443	0.0080778	-0.46892	0.39863	-0.36148	-0.29044	-0.56909	-0.25848	-0.04744	0.051857	-0.23049	-0.72399	-0.13127	0.48892	-0.54953	0.12185	-0.22921	-0.076466	-0.34156	-0.56024	-0.4101	-0.21178	-0.31263	-0.555	-0.025707	-0.39767	0.039886	-0.34498	-0.44062	-0.38521	0.0014811	-0.84962	
Deletion Peak  5 - CN values	9p23    	chr9:7790001-10630000(probes 136107:136332)    	chr9:8290001-10630000(probes 136147:136332)        	chr9:40002-29740000(probes 135629:138096)           	8.3515e-06	   0.060638		Actual Copy Change Given	-0.037155	0.48363	-0.44099	-0.25443	-0.081279	-0.44029	-0.59289	-0.0069231	-0.35712	-0.33491	-0.057956	-0.61482	-0.0029953	0.13762	-0.40757	-0.2956	-0.34814	0.45921	-0.26243	-0.023568	-0.12728	-0.2222	0.13056	-0.60165	-0.23064	1.4624	0.19061	0.21878	-0.42658	-0.10055	-0.16366	-0.22958	-0.45472	-0.29448	-0.34442	-0.22078	0.21141	-0.30479	-0.28586	-0.83376	-0.47114	-0.86779	-0.19297	-0.38057	-0.00148	1.2417	
Deletion Peak  6 - CN values	9p21.3  	chr9:21860002-22450000(probes 137357:137424)  	chr9:21950002-22009999(probes 137368:137374)      	chr9:40002-29740000(probes 135629:138096)           	1.0537e-19	 2.4167e-18		Actual Copy Change Given	-0.013895	0.10117	0.19211	-0.25443	-0.40834	-0.030459	-1.0451	-0.0069231	-0.82561	-0.3311	-0.014096	-0.93522	-0.0054376	-0.64021	-0.40757	-0.2956	-0.26135	0.45921	-0.52434	-0.034535	-0.46046	-0.2222	0.11713	-0.60165	-0.21344	0.89435	-0.069577	-0.013022	-0.74771	-0.10055	-0.15905	-0.22958	-0.45472	-0.39573	-0.34442	-0.22078	-0.19261	-0.47141	-0.28586	-0.84414	-1.064	-0.68973	-0.22862	-0.38057	-0.00148	-1.2613	
Deletion Peak  7 - CN values	10q26.3 	chr10:1-133797422(probes 145792:157570)            	chr10:133070002-133250000(probes 157528:157546)	chr10:133080002-133110000(probes 157529:157530)	0.24779	    0.26095		Actual Copy Change Given	-0.31792	-0.32103	-0.041819	-0.25165	-0.2122	-0.43431	-0.01687	0.0095704	-0.034164	0.0061667	-0.041287	-0.12154	-0.00071145	-0.01296	-0.21063	-0.28928	-0.43715	-0.066046	-0.010299	0.11061	-0.14688	0.025554	-0.036499	0.36406	-0.21795	0.0073822	-0.059829	0.0014949	-0.010357	-0.17972	-0.016192	-0.054463	-0.35867	-0.24746	-0.023827	-0.074377	0.24406	-0.31685	-0.27961	-0.030755	0.20706	-0.13149	-0.24539	-0.3779	0	-0.58144	
Deletion Peak  8 - CN values	12p13.1 	chr12:30001-122410000(probes 169546:181079)    	chr12:12810001-15019999(probes 170573:170765)    	chr12:12030001-15110000(probes 170495:170777)    	0.075912	   0.081319		Actual Copy Change Given	-0.70165	-0.32912	-0.47477	-0.24936	-0.26263	-0.44354	-0.0052684	-0.21652	-0.32075	0	0.021885	-0.013149	0.082463	-0.066057	0.38448	0.096082	-0.023475	0.29227	0.0050422	-0.020332	-0.45495	0.00064478	0.0039906	1.4866	-0.22756	-0.32052	-0.22218	0.46485	-0.0061878	-0.18766	-0.1669	0.49485	-0.036922	-0.12241	-0.10403	-0.12227	0.21261	-0.27331	0.23123	-0.39156	-0.016918	-0.087658	0.011342	-0.39014	-0.0017725	0.58653	
Deletion Peak  9 - CN values	13q11   	chr13:1-24170000(probes 181815:184089)              	chr13:18190001-18250000(probes 183664:183672)    	chr13:18060001-55280000(probes 183649:186904)    	4.5167e-05	 4.5167e-05		Actual Copy Change Given	-0.46886	-0.4125	-0.25894	-0.60228	-0.01201	0.0066449	-0.056917	-0.38539	-0.2604	-0.041674	-0.041609	-0.14634	-0.18148	-0.24448	-0.5885	-0.11072	-0.67828	-0.42871	-0.34984	-0.53674	-0.24476	-0.061215	0.0093095	-0.38947	-0.21457	-0.036051	-0.22065	-0.29132	-0.20953	-0.20862	-0.17218	-0.4275	-0.007296	-0.31176	-0.22149	-0.18364	-0.46318	-0.039745	-0.28923	-0.32805	-0.29266	0.084873	-0.025418	-0.47181	0.00059797	0.35847	
Deletion Peak 10 - CN values	15q12   	chr15:1-74480000(probes 202526:209094)              	chr15:26840001-30850000(probes 204824:204930)    	chr15:26880001-28299999(probes 204827:204927)    	0.11642	    0.11216		Actual Copy Change Given	-0.46048	-0.33983	-0.31743	-0.24481	-0.087829	-0.43251	-0.36218	0.002187	-0.041055	0.01188	-0.035162	-0.077676	-0.32491	-0.22216	-0.70069	-0.25267	-0.261	-0.22429	-0.31838	-0.27226	-0.14529	-0.46117	-0.061369	-0.072398	-0.20954	-0.33667	-0.36391	-0.24043	-0.30917	-0.20102	-0.043263	-0.10676	-0.45846	-0.33751	-0.11732	-0.19151	-0.2434	-0.24586	-0.54025	-0.012325	0.5909	-0.29499	-0.23373	-0.068508	-0.019127	-0.44666	
Deletion Peak 11 - CN values	17p13.2 	chr17:130002-21079999(probes 217622:219293)    	chr17:5270001-5400000(probes 217992:218005)        	chr17:120001-22750000(probes 217619:219328)        	4.3049e-05	 4.3049e-05		Actual Copy Change Given	-0.49535	-0.27204	-0.26564	-0.25368	-0.25315	-0.42106	-0.059321	-0.20965	-0.27627	-0.0099896	-0.055101	-0.48013	-0.34613	-0.19612	-0.1549	-0.29795	-0.016468	-0.35914	0.014726	-0.24195	-0.43316	-0.23317	-0.42671	-0.34408	-0.19666	0.34252	-0.22153	0.015899	-0.35086	-0.1027	-0.39293	-0.086758	-0.45555	-0.31192	-0.53571	-0.15054	0.047149	-0.28759	0.014018	-0.1168	-0.0080416	-0.026572	-0.19349	-0.39349	-0.0088083	-0.46504	
Deletion Peak 12 - CN values	18p11.32	chr18:1-21250000(probes 224844:226105)              	chr18:2-910000(probes 224845:224851)                  	chr18:340002-900000(probes 224849:224850)            	0.20889	    0.21056		Actual Copy Change Given	0.05618	-0.27019	-0.0027911	0.005613	-0.035991	-0.4377	-0.6528	0.013561	-0.1505	-0.322	-0.093838	-0.44999	-0.36098	-0.030887	-0.20251	0.039689	-0.013146	-0.075071	0.0042818	-0.050488	-0.27271	0.019232	-0.39585	0.33095	-0.40157	-0.31351	0.12699	-0.066692	-0.091856	-0.2077	-0.08043	0.14238	-0.41059	-0.045846	-0.077319	-0.022065	0.32026	0.30013	-0.51664	0.32603	-0.02023	-0.43064	-0.37416	0.2117	0.0024142	0.19003	
Deletion Peak 13 - CN values	18q22.2 	chr18:24710002-80373285(probes 226467:231475)	chr18:68670001-74819999(probes 230696:231042)    	chr18:41510001-80287934(probes 228162:231465)    	0.024186	   0.024037		Actual Copy Change Given	-0.05304	-0.2314	-0.47817	-0.24875	-0.032021	-0.43868	-0.35461	0.0085946	-0.12262	-0.33021	-0.092142	-0.44832	-0.36614	-0.28033	-0.60216	-0.28389	-0.4805	-0.072433	-0.01669	0.19765	-0.28692	-0.48033	-0.034043	0.2891	-0.16855	-0.31652	-0.10822	-0.053028	-0.52472	-0.21037	-0.16453	0.087902	-0.0039929	-0.35097	-0.32697	-0.079541	0.47288	-0.31892	-0.28815	0.13581	-0.028583	-0.42672	-0.051592	0.0088112	-0.01734	-0.63757	
Deletion Peak 14 - CN values	19q13.33	chr19:38920001-58617616(probes 234770:236429)	chr19:47830001-47960000(probes 235588:235600)    	chr19:45620001-51040000(probes 235363:235887)    	0.11009	    0.11216		Actual Copy Change Given	-0.050816	-0.12316	0.26287	-0.018299	-0.19868	-0.15688	-0.00055567	0.25087	-0.12998	0.017914	-0.092558	0	0.01861	-0.097127	-0.17643	-0.30716	0.41398	-0.030591	0.26343	0.012987	-0.41459	0.29562	0.24116	0.2836	-0.18581	0.041493	-0.20028	0.20127	-0.096994	0.063919	0.086309	-0.094063	-0.44471	-0.22496	0.011767	-0.10011	0.06918	-0.2183	-0.2608	-0.39823	0.016262	-0.42606	0.082478	-0.5211	-0.0025335	-0.47408	
Deletion Peak 15 - CN values	20p12.3 	chr20:1-21709999(probes 236430:238376)              	chr20:8090002-8899999(probes 237104:237138)        	chr20:8740002-8769999(probes 237122:237123)        	0.1248	    0.12672		Actual Copy Change Given	-0.42042	0.091632	-0.25772	-0.24891	0.033986	-0.13715	0.32301	0.007192	-0.086543	-0.0040881	-0.089056	-0.45557	-0.35953	0.11247	0.46082	0.070991	0.95898	-0.35639	0.013543	-0.23961	0.074183	0.028215	0.055199	-0.15855	0.0088878	0.02317	0.11602	1.9352	0.070858	0.076122	-0.14474	0.46062	0.25988	-0.44527	0.11827	-0.15021	-0.18268	0.023114	-0.25962	-0.35371	-0.019677	0.040264	-0.21456	-0.39972	-0.0086313	-0.21482	
Deletion Peak 16 - CN values	21p12   	chr21:1-46709983(probes 242183:246429)              	chr21:6840002-6869999(probes 242925:242926)        	chr21:6590001-7220000(probes 242891:242973)        	0.023492	          1		Actual Copy Change Given	-0.26686	-0.22111	-0.23725	0.69345	-0.043867	-0.057466	3.6569	-0.044971	-0.18241	0.042212	0.014983	-0.48298	-0.0062987	-0.068614	0.44563	-0.091106	-0.29524	0.24327	-0.049748	-0.0027073	-1.0669	-0.17118	-0.45351	0.42685	-0.40655	-0.29438	0.23867	-0.24522	0.1832	0.093914	0.045982	-0.051509	0.90333	0.18683	-0.34157	-0.093575	0.04533	0.010904	-0.015657	-0.2245	0.43324	0.26282	-0.099188	1.1091	0.037987	1.1213	
Deletion Peak 17 - CN values	21p11.2 	chr21:7820002-8989999(probes 243046:243199)    	chr21:8430001-8459999(probes 243124:243126)        	chr21:7960001-8709999(probes 243066:243164)        	9.209e-05	   0.010657		Actual Copy Change Given	-0.60433	-0.15061	-0.70737	0.21663	-0.043867	-0.057466	-0.44693	-0.27122	-0.40152	0.15604	-0.12295	-0.12053	-0.0062987	-0.21158	-0.21625	-0.091106	-0.29184	-0.32174	-0.049748	-0.42972	-0.18782	-0.35765	-0.37365	-0.17636	-0.14137	-0.27337	-0.092031	-0.23116	-0.28674	0.029767	-0.14167	-0.0047488	0.20957	-0.28758	-0.18775	-0.19368	-0.47204	-0.023077	-0.021405	-0.30265	0.25372	0.22145	8.8888e-05	-0.2314	0.037987	-0.34251	
Deletion Peak 18 - CN values	21q11.2 	chr21:1-46709983(probes 242183:246429)              	chr21:10330001-13999999(probes 243371:243375)    	chr21:8890001-25520000(probes 243190:244449)      	1.5077e-05	    0.77535		Actual Copy Change Given	-0.035767	-0.15635	-0.28755	0.6766	-0.029513	0.0063588	3.6567	-0.0098066	-0.015533	0.28615	0.0088471	-0.4286	-0.0097107	-0.076313	0.42555	-0.058008	-0.14133	0.34094	0.20402	-0.031555	-1.0897	-0.0019894	-0.42945	0.2853	-0.27683	-0.34486	0.018482	-0.17658	0.11586	-0.0049342	0.051311	-0.15758	0.8951	0.095279	-0.25279	0.1722	-0.008726	-0.021449	-0.028746	-0.3442	0.33675	0.135	0.062543	1.1919	-0.012753	1.0593	
Deletion Peak 19 - CN values	21q11.2 	chr21:8980001-25569999(probes 243200:244454)  	chr21:10330001-13999999(probes 243371:243375)    	chr21:8890001-25520000(probes 243190:244449)      	1.5077e-05	   0.024037		Actual Copy Change Given	-0.035767	-0.15635	-0.28755	0.6766	-0.029513	0.0063588	3.6567	-0.0098066	-0.015533	0.28615	0.0088471	-0.4286	-0.0097107	-0.076313	0.42555	-0.058008	-0.14133	0.34094	0.20402	-0.031555	-1.0897	-0.0019894	-0.42945	0.2853	-0.27683	-0.34486	0.018482	-0.17658	0.11586	-0.0049342	0.051311	-0.15758	0.8951	0.095279	-0.25279	0.1722	-0.008726	-0.021449	-0.028746	-0.3442	0.33675	0.135	0.062543	1.1919	-0.012753	1.0593	
Deletion Peak 20 - CN values	22p11.2 	chr22:10960001-16939999(probes 247540:248056)	chr22:11880002-11960000(probes 247664:247674)    	chr22:11730001-12009999(probes 247642:247681)    	0.014818	   0.014818		Actual Copy Change Given	-0.52975	-0.29281	-0.16087	0.20752	-0.067179	-0.74107	0.2144	-0.20385	-0.32111	-0.01714	-0.10249	-0.18376	-0.038772	-0.094727	-0.75848	-0.036996	-0.063757	-0.54161	0.047767	-0.29076	0.31159	-0.0039545	-0.073545	-0.18658	0.20227	-0.19271	0.049103	-0.19713	-0.12542	0.084875	-0.025152	-0.049663	0.55492	0.14424	-0.30607	-0.13742	0.057449	0.019689	-0.039958	-0.066154	0.26527	0.096897	-0.17693	-0.6172	-0.043146	0.090192	
Deletion Peak 21 - CN values	Xp22.33 	chrX:1-150910000(probes 250604:262501)              	chrX:250001-3249999(probes 250638:250639)            	chrX:1-3269999(probes 250604:250641)                      	0.014932	   0.014932		Actual Copy Change Given	-0.076037	0.2008	0.23768	0.30294	-0.13297	0.46047	-0.011581	0.057631	0.78772	-0.11348	0.0062161	-0.2677	-0.36783	-0.17898	0.091816	0.0085561	-0.2717	0.66881	-0.031254	0.22945	-0.59959	-0.011908	0.030352	-0.10365	-0.16104	0.33912	0.23476	0.46652	-0.05771	0.22993	0	0.10017	0.0019624	0.096056	0.5356	-0.23332	-0.18659	-0.3	0.46531	-0.071669	-0.39934	-0.040563	-0.17682	0.0097305	0.47661	0.39631	
Deletion Peak 22 - CN values	Yq11.23 	chrY:9900002-57227415(probes 263806:268693)    	chrY:23200002-24920000(probes 265254:265441)      	chrY:23140001-23309999(probes 265246:265267)      	0.060638	   0.060638		Actual Copy Change Given	0.42022	0.26584	-0.75621	0.037397	-0.4136	-0.35004	1.3669	-0.19696	-0.82396	-0.31738	-0.18298	-0.76385	-0.70334	-0.60756	-0.13957	0.056669	-0.10368	-0.75959	-0.79772	-0.79545	0.36579	-0.5768	-0.86011	-0.48141	-0.70424	0.34754	-0.4909	-1.0054	-0.025209	-0.092558	-0.47418	-0.61932	-0.91409	0.15897	-1.0087	0.25802	1.1584	-0.27051	0.0036615	0.34451	-0.077047	0.24467	-0.15054	0.296	0.26488	0.35921