GISTIC identifies genomic regions that are significantly gained or

lost across a set of tumors. The pipeline first filters out normal

samples from the segmented copy-number data by inspecting the TCGA

There were 46 tumor samples used in this analysis:  23 significant arm-level results, 22 significant focal amplifications, and 22 significant focal deletions were found.

Q value (bottom). The green line represents the significance

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 14q13.3.

Genes in bold are cancer genes as defined by  <a href="http://www.sanger.ac.uk/genetics/CGP/Census/">The Sanger Institute: Cancer Gene Census</a>

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 8q24.21.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 7p11.2.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 5p15.33.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 20q13.31.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 20q13.33.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 21p12.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 20p11.21.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 19q13.12.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 6p21.1.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 21q11.2.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 12q15.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 12p11.22.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 8q13.1.

This is the comprehensive list of <strong>amplified</strong> genes in the wide peak for 8q24.3.