This pipeline computes the correlation between significant copy number variation (cnv focal) genes and molecular subtypes.
Testing the association between copy number variation 61 focal events and 10 molecular subtypes across 370 patients, 331 significant findings detected with P value < 0.05 and Q value < 0.25.
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amp_1q21.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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amp_1q42.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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amp_2p24.1 cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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amp_2q33.1 cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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amp_3q26.31 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_4p14 cnv correlated to 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_5p15.33 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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amp_5q35.3 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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amp_6p25.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CNMF'.
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amp_6p21.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', and 'MRNASEQ_CNMF'.
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amp_6q12 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_CNMF'.
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amp_6q12 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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amp_7q31.2 cnv correlated to 'METHLYATION_CNMF'.
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amp_8q24.21 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_9q34.2 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_10p15.1 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_11q13.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_13q32.3 cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_13q33.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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amp_15q26.3 cnv correlated to 'MRNASEQ_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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amp_17p11.2 cnv correlated to 'METHLYATION_CNMF'.
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amp_17q25.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_19p13.12 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_19q13.11 cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_20q13.13 cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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amp_20q13.33 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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amp_xq28 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_1p36.31 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_1p36.11 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_2q22.1 cnv correlated to 'CN_CNMF' and 'MRNASEQ_CNMF'.
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del_2q37.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_3p13 cnv correlated to 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_4p16.3 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_4q21.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_4q24 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_4q35.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_6q27 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MIRSEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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del_7q36.3 cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_8p23.2 cnv correlated to 'CN_CNMF'.
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del_8p12 cnv correlated to 'CN_CNMF'.
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del_9p21.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_9q31.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_10q23.31 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_10q26.13 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_11q14.1 cnv correlated to 'CN_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_11q23.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_12p12.1 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_12q24.33 cnv correlated to 'CN_CNMF'.
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del_13q14.2 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_14q23.3 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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del_14q32.33 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_15q26.3 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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del_16q23.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_17p13.1 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_17p11.2 cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_18q21.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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del_19p13.3 cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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del_22q12.1 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', and 'MRNASEQ_CNMF'.
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del_22q13.32 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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del_xq26.2 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nCNV (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
del 10q23 31 | 97 (26%) | 273 |
1e-05 (1e-04) |
0.0143 (0.0345) |
0.00046 (0.00238) |
0.004 (0.013) |
1e-05 (1e-04) |
1e-05 (1e-04) |
1e-05 (1e-04) |
2e-05 (0.000174) |
0.0149 (0.0357) |
1e-05 (1e-04) |
del 16q23 1 | 162 (44%) | 208 |
1e-05 (1e-04) |
1e-05 (1e-04) |
0.00103 (0.00462) |
0.0006 (0.00295) |
1e-05 (1e-04) |
1e-05 (1e-04) |
3e-05 (0.000247) |
3e-05 (0.000247) |
1e-05 (1e-04) |
6e-05 (0.000436) |
amp 17q25 3 | 145 (39%) | 225 |
1e-05 (1e-04) |
0.0486 (0.0901) |
0.013 (0.0323) |
0.0314 (0.0647) |
0.0114 (0.0291) |
0.0105 (0.0275) |
0.0074 (0.0212) |
0.00149 (0.00618) |
0.0544 (0.0987) |
0.0108 (0.0282) |
amp xq28 | 87 (24%) | 283 |
0.0018 (0.00712) |
0.0499 (0.0921) |
0.52 (0.589) |
0.0342 (0.0689) |
0.0279 (0.0591) |
0.0098 (0.026) |
0.00014 (0.000863) |
0.00335 (0.0114) |
0.0158 (0.0373) |
0.00038 (0.00205) |
del 3p13 | 73 (20%) | 297 |
0.0739 (0.123) |
0.00903 (0.0245) |
0.0357 (0.071) |
0.023 (0.0506) |
6e-05 (0.000436) |
1e-05 (1e-04) |
8e-05 (0.000536) |
0.0338 (0.0684) |
0.00942 (0.0254) |
0.00163 (0.00667) |
del 4q21 3 | 171 (46%) | 199 |
1e-05 (1e-04) |
0.00107 (0.00476) |
0.0208 (0.0467) |
0.262 (0.336) |
1e-05 (1e-04) |
0.00026 (0.00146) |
0.00112 (0.00485) |
0.00175 (0.00702) |
1e-05 (1e-04) |
0.00014 (0.000863) |
del 4q24 | 173 (47%) | 197 |
1e-05 (1e-04) |
0.00102 (0.00462) |
0.0376 (0.0742) |
0.283 (0.358) |
1e-05 (1e-04) |
8e-05 (0.000536) |
0.00186 (0.00722) |
0.00019 (0.0011) |
2e-05 (0.000174) |
6e-05 (0.000436) |
del 4q35 1 | 172 (46%) | 198 |
1e-05 (1e-04) |
0.00048 (0.00244) |
0.0328 (0.0669) |
0.444 (0.516) |
1e-05 (1e-04) |
0.00072 (0.00338) |
0.00207 (0.00765) |
0.00622 (0.0187) |
4e-05 (0.000309) |
0.00181 (0.00712) |
del 10q26 13 | 105 (28%) | 265 |
1e-05 (1e-04) |
0.0259 (0.0558) |
0.00205 (0.00762) |
0.0104 (0.0273) |
1e-05 (1e-04) |
1e-05 (1e-04) |
1e-05 (1e-04) |
1e-05 (1e-04) |
0.0732 (0.122) |
1e-05 (1e-04) |
del 13q14 2 | 179 (48%) | 191 |
1e-05 (1e-04) |
0.133 (0.197) |
0.0348 (0.0698) |
0.0447 (0.0842) |
0.0004 (0.00214) |
1e-05 (1e-04) |
0.00176 (0.00702) |
0.00069 (0.00329) |
0.0171 (0.0394) |
0.00024 (0.00137) |
amp 19p13 12 | 69 (19%) | 301 |
0.0128 (0.0318) |
0.00109 (0.00482) |
0.269 (0.344) |
0.0711 (0.12) |
0.00057 (0.00285) |
0.00044 (0.00231) |
0.0031 (0.0109) |
0.00232 (0.00842) |
0.00259 (0.00919) |
0.00127 (0.00538) |
amp 19q13 11 | 91 (25%) | 279 |
0.0161 (0.0378) |
0.092 (0.147) |
0.0668 (0.115) |
0.0306 (0.0637) |
0.00049 (0.00247) |
0.0006 (0.00295) |
0.0327 (0.0669) |
0.0019 (0.00729) |
1e-05 (1e-04) |
0.00015 (0.000897) |
del 1p36 31 | 162 (44%) | 208 |
1e-05 (1e-04) |
2e-05 (0.000174) |
0.068 (0.117) |
0.106 (0.164) |
1e-05 (1e-04) |
1e-05 (1e-04) |
0.00154 (0.00635) |
0.0013 (0.00543) |
0.00379 (0.0125) |
0.0048 (0.0149) |
del 1p36 11 | 142 (38%) | 228 |
1e-05 (1e-04) |
1e-05 (1e-04) |
0.087 (0.14) |
0.336 (0.413) |
1e-05 (1e-04) |
1e-05 (1e-04) |
4e-05 (0.000309) |
0.00011 (0.000706) |
0.00047 (0.00241) |
0.00015 (0.000897) |
del 9p21 3 | 150 (41%) | 220 |
1e-05 (1e-04) |
0.025 (0.0542) |
0.284 (0.358) |
0.249 (0.324) |
2e-05 (0.000174) |
0.00168 (0.00679) |
6e-05 (0.000436) |
0.00194 (0.0073) |
0.0204 (0.0461) |
0.00513 (0.0157) |
del 17p13 1 | 226 (61%) | 144 |
1e-05 (1e-04) |
0.0677 (0.116) |
0.02 (0.0454) |
0.00187 (0.00722) |
3e-05 (0.000247) |
7e-05 (0.000485) |
2e-05 (0.000174) |
8e-05 (0.000536) |
0.189 (0.259) |
2e-05 (0.000174) |
amp 4p14 | 54 (15%) | 316 |
0.0634 (0.111) |
0.0197 (0.0451) |
0.0117 (0.0296) |
0.0628 (0.111) |
4e-05 (0.000309) |
0.00112 (0.00485) |
0.0339 (0.0684) |
0.0557 (0.101) |
0.00781 (0.0221) |
0.0115 (0.0293) |
amp 10p15 1 | 72 (19%) | 298 |
0.00395 (0.0129) |
0.903 (0.921) |
0.00673 (0.0196) |
0.00644 (0.019) |
0.0367 (0.0727) |
0.00334 (0.0114) |
0.407 (0.482) |
0.244 (0.321) |
0.0076 (0.0217) |
0.0232 (0.0509) |
amp 20q13 13 | 124 (34%) | 246 |
1e-05 (1e-04) |
0.579 (0.638) |
0.382 (0.462) |
0.0155 (0.0367) |
0.017 (0.0393) |
0.00025 (0.00141) |
0.376 (0.455) |
0.0117 (0.0296) |
4e-05 (0.000309) |
0.0483 (0.0899) |
del 9q31 3 | 119 (32%) | 251 |
1e-05 (1e-04) |
0.00891 (0.0244) |
0.344 (0.421) |
0.4 (0.475) |
0.00096 (0.00444) |
0.00044 (0.00231) |
0.0261 (0.0559) |
0.00669 (0.0196) |
0.254 (0.329) |
0.00017 (0.00101) |
del 14q23 3 | 131 (35%) | 239 |
1e-05 (1e-04) |
0.498 (0.569) |
0.00244 (0.00876) |
0.00389 (0.0128) |
0.00192 (0.0073) |
4e-05 (0.000309) |
0.0124 (0.0311) |
0.0978 (0.155) |
0.00427 (0.0136) |
0.0503 (0.0924) |
del 17p11 2 | 195 (53%) | 175 |
1e-05 (1e-04) |
0.327 (0.403) |
0.0731 (0.122) |
0.02 (0.0454) |
0.00024 (0.00137) |
0.00831 (0.0234) |
0.00097 (0.00445) |
0.00031 (0.0017) |
0.231 (0.308) |
0.00037 (0.00202) |
amp 1q21 3 | 271 (73%) | 99 |
1e-05 (1e-04) |
0.00018 (0.00106) |
0.0664 (0.115) |
0.0224 (0.0497) |
2e-05 (0.000174) |
0.00343 (0.0116) |
0.138 (0.203) |
0.0293 (0.0615) |
0.105 (0.162) |
0.385 (0.464) |
amp 6q12 | 83 (22%) | 287 |
1e-05 (1e-04) |
0.00711 (0.0206) |
0.0122 (0.0307) |
0.0432 (0.0818) |
0.00845 (0.0236) |
0.00891 (0.0244) |
0.32 (0.398) |
0.549 (0.611) |
0.0814 (0.133) |
0.0888 (0.142) |
amp 8q24 21 | 231 (62%) | 139 |
1e-05 (1e-04) |
0.0483 (0.0899) |
0.173 (0.244) |
0.248 (0.324) |
0.00063 (0.00303) |
1e-05 (1e-04) |
0.0825 (0.134) |
0.00699 (0.0203) |
0.378 (0.458) |
7e-05 (0.000485) |
amp 11q13 3 | 57 (15%) | 313 |
0.0405 (0.0786) |
0.496 (0.569) |
0.073 (0.122) |
0.991 (0.996) |
0.00416 (0.0134) |
0.0173 (0.0397) |
0.0127 (0.0318) |
0.00313 (0.0109) |
0.181 (0.25) |
0.00011 (0.000706) |
amp 13q32 3 | 67 (18%) | 303 |
1e-05 (1e-04) |
0.103 (0.16) |
0.326 (0.403) |
0.0377 (0.0742) |
0.0096 (0.0258) |
0.0816 (0.133) |
0.0134 (0.0329) |
0.199 (0.269) |
0.00629 (0.0188) |
0.0357 (0.071) |
amp 20q13 33 | 128 (35%) | 242 |
1e-05 (1e-04) |
0.146 (0.211) |
0.0111 (0.0288) |
0.00071 (0.00336) |
0.00487 (0.0151) |
6e-05 (0.000436) |
0.228 (0.305) |
0.0618 (0.11) |
1e-05 (1e-04) |
0.13 (0.195) |
del 14q32 33 | 133 (36%) | 237 |
1e-05 (1e-04) |
0.144 (0.208) |
0.0137 (0.0333) |
0.103 (0.16) |
0.00462 (0.0145) |
0.00013 (0.000818) |
0.0813 (0.133) |
0.174 (0.244) |
0.0134 (0.0329) |
0.0163 (0.0381) |
del 15q26 3 | 79 (21%) | 291 |
0.00061 (0.00298) |
0.436 (0.508) |
0.0229 (0.0505) |
0.00116 (0.00498) |
0.00875 (0.0242) |
0.009 (0.0245) |
0.0789 (0.13) |
0.119 (0.182) |
0.00237 (0.00855) |
0.0652 (0.113) |
del 19p13 3 | 87 (24%) | 283 |
1e-05 (1e-04) |
0.426 (0.5) |
0.348 (0.425) |
0.026 (0.0559) |
0.00498 (0.0153) |
0.00272 (0.00959) |
0.113 (0.172) |
0.13 (0.195) |
0.00194 (0.0073) |
0.00112 (0.00485) |
amp 1q42 2 | 268 (72%) | 102 |
1e-05 (1e-04) |
0.00205 (0.00762) |
0.538 (0.604) |
0.576 (0.635) |
1e-05 (1e-04) |
0.00011 (0.000706) |
0.251 (0.326) |
0.00852 (0.0236) |
0.056 (0.101) |
0.399 (0.475) |
amp 3q26 31 | 77 (21%) | 293 |
2e-05 (0.000174) |
0.0998 (0.157) |
0.14 (0.206) |
0.694 (0.743) |
0.0215 (0.0478) |
0.0206 (0.0464) |
0.0723 (0.121) |
0.00457 (0.0144) |
0.257 (0.331) |
0.0474 (0.0886) |
amp 6p25 2 | 159 (43%) | 211 |
1e-05 (1e-04) |
0.00015 (0.000897) |
0.0961 (0.153) |
0.254 (0.329) |
0.0438 (0.0828) |
0.0245 (0.0532) |
0.015 (0.0359) |
0.0632 (0.111) |
0.708 (0.751) |
0.427 (0.5) |
amp 13q33 3 | 67 (18%) | 303 |
2e-05 (0.000174) |
0.0456 (0.0855) |
0.655 (0.704) |
0.0535 (0.0974) |
0.00128 (0.00538) |
0.248 (0.324) |
0.00976 (0.026) |
0.179 (0.249) |
0.00636 (0.0188) |
0.0819 (0.133) |
del 2q37 3 | 62 (17%) | 308 |
7e-05 (0.000485) |
0.534 (0.603) |
0.567 (0.628) |
0.164 (0.233) |
1e-05 (1e-04) |
0.00087 (0.00405) |
0.0517 (0.0944) |
0.00967 (0.0259) |
0.305 (0.382) |
0.0021 (0.00772) |
amp 2p24 1 | 65 (18%) | 305 |
0.0349 (0.0698) |
1 (1.00) |
0.877 (0.899) |
0.18 (0.25) |
0.109 (0.167) |
0.00372 (0.0123) |
0.0169 (0.0392) |
0.0426 (0.081) |
0.0716 (0.121) |
0.173 (0.244) |
amp 2q33 1 | 64 (17%) | 306 |
0.028 (0.0591) |
0.937 (0.951) |
0.872 (0.895) |
0.642 (0.694) |
0.0514 (0.0941) |
0.0113 (0.0291) |
0.00186 (0.00722) |
0.124 (0.188) |
0.00576 (0.0174) |
0.195 (0.265) |
amp 5p15 33 | 163 (44%) | 207 |
1e-05 (1e-04) |
0.0324 (0.0665) |
0.152 (0.218) |
0.0491 (0.0907) |
0.199 (0.269) |
0.608 (0.665) |
0.143 (0.208) |
0.0163 (0.0381) |
0.142 (0.208) |
0.126 (0.19) |
amp 6p21 1 | 158 (43%) | 212 |
1e-05 (1e-04) |
0.00122 (0.0052) |
0.00369 (0.0123) |
0.0591 (0.105) |
0.0138 (0.0335) |
0.0639 (0.111) |
0.0553 (0.1) |
0.0635 (0.111) |
0.175 (0.245) |
0.529 (0.598) |
amp 6q12 | 109 (29%) | 261 |
1e-05 (1e-04) |
0.042 (0.0804) |
0.136 (0.201) |
0.503 (0.574) |
0.0311 (0.0643) |
0.108 (0.166) |
0.0406 (0.0786) |
0.618 (0.674) |
0.24 (0.317) |
0.156 (0.223) |
amp 9q34 2 | 47 (13%) | 323 |
0.0292 (0.0614) |
0.4 (0.475) |
0.183 (0.251) |
0.174 (0.244) |
0.0267 (0.0571) |
0.0925 (0.147) |
0.245 (0.322) |
0.0133 (0.0329) |
0.397 (0.474) |
0.0209 (0.0468) |
del 4p16 3 | 85 (23%) | 285 |
1e-05 (1e-04) |
0.148 (0.212) |
0.0107 (0.028) |
0.225 (0.302) |
0.104 (0.161) |
0.102 (0.159) |
0.1 (0.157) |
0.027 (0.0575) |
0.0569 (0.102) |
0.00541 (0.0164) |
del 6q27 | 136 (37%) | 234 |
0.00165 (0.00671) |
0.00537 (0.0164) |
0.143 (0.208) |
0.325 (0.403) |
0.472 (0.544) |
0.482 (0.554) |
0.0296 (0.0618) |
0.0403 (0.0785) |
0.561 (0.623) |
0.311 (0.389) |
del 7q36 3 | 34 (9%) | 336 |
0.231 (0.308) |
0.0399 (0.0781) |
0.178 (0.248) |
0.269 (0.344) |
0.0417 (0.0802) |
0.133 (0.197) |
0.899 (0.919) |
0.0705 (0.12) |
0.0003 (0.00166) |
0.00772 (0.0219) |
del 11q23 3 | 93 (25%) | 277 |
0.00045 (0.00235) |
0.49 (0.563) |
0.235 (0.312) |
0.413 (0.488) |
0.0605 (0.108) |
0.0424 (0.0807) |
0.0748 (0.124) |
0.137 (0.201) |
0.0136 (0.0332) |
0.00225 (0.00822) |
del 12p12 1 | 78 (21%) | 292 |
0.00103 (0.00462) |
0.454 (0.526) |
0.582 (0.639) |
0.723 (0.76) |
0.00247 (0.00881) |
0.228 (0.305) |
0.0623 (0.11) |
0.031 (0.0643) |
0.182 (0.25) |
0.033 (0.0671) |
del 22q13 32 | 83 (22%) | 287 |
0.00063 (0.00303) |
0.0796 (0.131) |
0.00407 (0.0131) |
0.984 (0.992) |
0.0001 (0.000663) |
0.0102 (0.027) |
0.0562 (0.101) |
0.263 (0.336) |
0.72 (0.76) |
0.287 (0.361) |
del 11q14 1 | 77 (21%) | 293 |
0.0158 (0.0373) |
0.355 (0.433) |
0.707 (0.751) |
0.857 (0.882) |
0.119 (0.182) |
0.146 (0.211) |
0.127 (0.191) |
0.258 (0.332) |
0.0085 (0.0236) |
0.0153 (0.0366) |
del 18q21 2 | 94 (25%) | 276 |
0.0235 (0.0515) |
0.00012 (0.000762) |
0.97 (0.979) |
0.924 (0.94) |
0.0704 (0.12) |
3e-05 (0.000247) |
0.821 (0.847) |
0.538 (0.604) |
0.418 (0.491) |
0.299 (0.376) |
del 22q12 1 | 79 (21%) | 291 |
0.00633 (0.0188) |
0.324 (0.402) |
0.00335 (0.0114) |
0.969 (0.979) |
0.00316 (0.011) |
0.103 (0.16) |
0.635 (0.689) |
0.197 (0.268) |
0.711 (0.753) |
0.77 (0.8) |
amp 5q35 3 | 135 (36%) | 235 |
1e-05 (1e-04) |
0.0409 (0.0789) |
0.634 (0.689) |
0.622 (0.678) |
0.73 (0.767) |
0.958 (0.971) |
0.436 (0.508) |
0.999 (1.00) |
0.689 (0.739) |
0.615 (0.672) |
amp 15q26 3 | 54 (15%) | 316 |
0.0735 (0.122) |
0.445 (0.516) |
0.766 (0.798) |
0.0842 (0.136) |
0.0237 (0.0516) |
0.0391 (0.0767) |
0.418 (0.491) |
0.182 (0.25) |
0.498 (0.569) |
0.576 (0.635) |
del 2q22 1 | 52 (14%) | 318 |
0.0035 (0.0117) |
0.39 (0.468) |
0.651 (0.703) |
0.322 (0.4) |
0.00462 (0.0145) |
0.0652 (0.113) |
0.272 (0.347) |
0.167 (0.237) |
0.775 (0.803) |
0.0772 (0.127) |
del xq26 2 | 67 (18%) | 303 |
7e-05 (0.000485) |
0.00732 (0.0211) |
0.366 (0.445) |
0.314 (0.392) |
0.148 (0.212) |
0.391 (0.468) |
0.282 (0.358) |
0.699 (0.744) |
0.286 (0.36) |
0.697 (0.743) |
amp 7q31 2 | 120 (32%) | 250 |
0.225 (0.302) |
0.00444 (0.0141) |
0.176 (0.245) |
0.656 (0.704) |
0.638 (0.691) |
0.894 (0.915) |
0.172 (0.244) |
0.436 (0.508) |
0.722 (0.76) |
0.604 (0.663) |
amp 17p11 2 | 46 (12%) | 324 |
0.191 (0.26) |
0.0419 (0.0804) |
0.366 (0.445) |
0.536 (0.604) |
0.469 (0.542) |
0.232 (0.308) |
0.144 (0.208) |
0.254 (0.329) |
0.387 (0.466) |
0.246 (0.322) |
del 8p23 2 | 247 (67%) | 123 |
1e-05 (1e-04) |
0.126 (0.19) |
0.827 (0.853) |
0.813 (0.841) |
0.0974 (0.154) |
0.652 (0.703) |
0.696 (0.743) |
0.167 (0.237) |
0.173 (0.244) |
0.069 (0.118) |
del 8p12 | 242 (65%) | 128 |
1e-05 (1e-04) |
0.126 (0.19) |
0.392 (0.469) |
0.736 (0.77) |
0.0711 (0.12) |
0.565 (0.626) |
0.339 (0.415) |
0.099 (0.156) |
0.13 (0.194) |
0.0875 (0.14) |
del 12q24 33 | 59 (16%) | 311 |
0.00338 (0.0115) |
1 (1.00) |
0.132 (0.197) |
0.988 (0.995) |
0.546 (0.611) |
0.915 (0.932) |
0.507 (0.577) |
0.716 (0.756) |
0.776 (0.803) |
0.281 (0.357) |
del 20p12 1 | 29 (8%) | 341 |
0.233 (0.309) |
0.549 (0.611) |
0.548 (0.611) |
0.511 (0.58) |
0.732 (0.767) |
0.547 (0.611) |
0.208 (0.281) |
0.737 (0.77) |
0.759 (0.792) |
0.409 (0.483) |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 1(1Q21.3) MUTATED | 42 | 116 | 113 |
AMP PEAK 1(1Q21.3) WILD-TYPE | 51 | 35 | 13 |
P value = 0.00018 (Fisher's exact test), Q value = 0.0011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 1(1Q21.3) MUTATED | 54 | 119 | 98 |
AMP PEAK 1(1Q21.3) WILD-TYPE | 39 | 42 | 18 |
P value = 0.0224 (Fisher's exact test), Q value = 0.05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
AMP PEAK 1(1Q21.3) MUTATED | 28 | 25 | 30 | 17 | 27 |
AMP PEAK 1(1Q21.3) WILD-TYPE | 11 | 20 | 8 | 1 | 11 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 1(1Q21.3) MUTATED | 49 | 51 | 66 | 46 | 54 |
AMP PEAK 1(1Q21.3) WILD-TYPE | 18 | 35 | 5 | 25 | 15 |
P value = 0.00343 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 1(1Q21.3) MUTATED | 36 | 38 | 74 | 72 | 46 |
AMP PEAK 1(1Q21.3) WILD-TYPE | 18 | 18 | 40 | 12 | 10 |
P value = 0.0293 (Fisher's exact test), Q value = 0.061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 1(1Q21.3) MUTATED | 37 | 60 | 45 | 86 | 39 |
AMP PEAK 1(1Q21.3) WILD-TYPE | 7 | 35 | 11 | 36 | 9 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 2(1Q42.2) MUTATED | 50 | 105 | 113 |
AMP PEAK 2(1Q42.2) WILD-TYPE | 43 | 46 | 13 |
P value = 0.00205 (Fisher's exact test), Q value = 0.0076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 2(1Q42.2) MUTATED | 55 | 119 | 94 |
AMP PEAK 2(1Q42.2) WILD-TYPE | 38 | 42 | 22 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 2(1Q42.2) MUTATED | 46 | 46 | 67 | 49 | 55 |
AMP PEAK 2(1Q42.2) WILD-TYPE | 21 | 40 | 4 | 22 | 14 |
P value = 0.00011 (Fisher's exact test), Q value = 0.00071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 2(1Q42.2) MUTATED | 33 | 39 | 71 | 73 | 47 |
AMP PEAK 2(1Q42.2) WILD-TYPE | 21 | 17 | 43 | 11 | 9 |
P value = 0.00852 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 2(1Q42.2) MUTATED | 32 | 58 | 45 | 87 | 42 |
AMP PEAK 2(1Q42.2) WILD-TYPE | 12 | 37 | 11 | 35 | 6 |
P value = 0.0349 (Fisher's exact test), Q value = 0.07
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 3(2P24.1) MUTATED | 9 | 34 | 22 |
AMP PEAK 3(2P24.1) WILD-TYPE | 84 | 117 | 104 |
P value = 0.00372 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 3(2P24.1) MUTATED | 17 | 3 | 21 | 16 | 6 |
AMP PEAK 3(2P24.1) WILD-TYPE | 37 | 53 | 93 | 68 | 50 |
P value = 0.0169 (Fisher's exact test), Q value = 0.039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
AMP PEAK 3(2P24.1) MUTATED | 12 | 15 | 8 | 13 | 6 | 10 |
AMP PEAK 3(2P24.1) WILD-TYPE | 28 | 48 | 84 | 71 | 40 | 30 |
P value = 0.0426 (Fisher's exact test), Q value = 0.081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 3(2P24.1) MUTATED | 14 | 20 | 9 | 16 | 5 |
AMP PEAK 3(2P24.1) WILD-TYPE | 30 | 75 | 47 | 106 | 43 |
P value = 0.028 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 4(2Q33.1) MUTATED | 8 | 30 | 26 |
AMP PEAK 4(2Q33.1) WILD-TYPE | 85 | 121 | 100 |
P value = 0.0113 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 4(2Q33.1) MUTATED | 15 | 4 | 14 | 20 | 9 |
AMP PEAK 4(2Q33.1) WILD-TYPE | 39 | 52 | 100 | 64 | 47 |
P value = 0.00186 (Fisher's exact test), Q value = 0.0072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
AMP PEAK 4(2Q33.1) MUTATED | 9 | 17 | 6 | 10 | 10 | 11 |
AMP PEAK 4(2Q33.1) WILD-TYPE | 31 | 46 | 86 | 74 | 36 | 29 |
P value = 0.00576 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
AMP PEAK 4(2Q33.1) MUTATED | 30 | 10 | 11 | 10 |
AMP PEAK 4(2Q33.1) WILD-TYPE | 77 | 71 | 91 | 40 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 5(3Q26.31) MUTATED | 7 | 51 | 19 |
AMP PEAK 5(3Q26.31) WILD-TYPE | 86 | 100 | 107 |
P value = 0.0215 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 5(3Q26.31) MUTATED | 22 | 23 | 12 | 11 | 9 |
AMP PEAK 5(3Q26.31) WILD-TYPE | 45 | 63 | 59 | 60 | 60 |
P value = 0.0206 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 5(3Q26.31) MUTATED | 17 | 5 | 30 | 16 | 9 |
AMP PEAK 5(3Q26.31) WILD-TYPE | 37 | 51 | 84 | 68 | 47 |
P value = 0.00457 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 5(3Q26.31) MUTATED | 17 | 24 | 9 | 22 | 4 |
AMP PEAK 5(3Q26.31) WILD-TYPE | 27 | 71 | 47 | 100 | 44 |
P value = 0.0474 (Fisher's exact test), Q value = 0.089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
AMP PEAK 5(3Q26.31) MUTATED | 14 | 20 | 20 | 12 | 5 |
AMP PEAK 5(3Q26.31) WILD-TYPE | 56 | 62 | 80 | 22 | 49 |
P value = 0.0197 (Fisher's exact test), Q value = 0.045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 6(4P14) MUTATED | 11 | 17 | 26 |
AMP PEAK 6(4P14) WILD-TYPE | 82 | 144 | 90 |
P value = 0.0117 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
AMP PEAK 6(4P14) MUTATED | 5 | 6 | 7 | 4 | 4 | 1 |
AMP PEAK 6(4P14) WILD-TYPE | 36 | 67 | 12 | 18 | 18 | 0 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 6(4P14) MUTATED | 12 | 11 | 21 | 8 | 1 |
AMP PEAK 6(4P14) WILD-TYPE | 55 | 75 | 50 | 63 | 68 |
P value = 0.00112 (Fisher's exact test), Q value = 0.0048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 6(4P14) MUTATED | 10 | 8 | 13 | 21 | 1 |
AMP PEAK 6(4P14) WILD-TYPE | 44 | 48 | 101 | 63 | 55 |
P value = 0.0339 (Fisher's exact test), Q value = 0.068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
AMP PEAK 6(4P14) MUTATED | 7 | 14 | 9 | 6 | 10 | 8 |
AMP PEAK 6(4P14) WILD-TYPE | 33 | 49 | 83 | 78 | 36 | 32 |
P value = 0.00781 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
AMP PEAK 6(4P14) MUTATED | 18 | 16 | 7 | 13 |
AMP PEAK 6(4P14) WILD-TYPE | 89 | 65 | 95 | 37 |
P value = 0.0115 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
AMP PEAK 6(4P14) MUTATED | 14 | 16 | 18 | 5 | 1 |
AMP PEAK 6(4P14) WILD-TYPE | 56 | 66 | 82 | 29 | 53 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 7(5P15.33) MUTATED | 16 | 80 | 67 |
AMP PEAK 7(5P15.33) WILD-TYPE | 77 | 71 | 59 |
P value = 0.0324 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 7(5P15.33) MUTATED | 32 | 82 | 49 |
AMP PEAK 7(5P15.33) WILD-TYPE | 61 | 79 | 67 |
P value = 0.0491 (Fisher's exact test), Q value = 0.091
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
AMP PEAK 7(5P15.33) MUTATED | 17 | 15 | 25 | 10 | 17 |
AMP PEAK 7(5P15.33) WILD-TYPE | 22 | 30 | 13 | 8 | 21 |
P value = 0.0163 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 7(5P15.33) MUTATED | 26 | 47 | 28 | 43 | 16 |
AMP PEAK 7(5P15.33) WILD-TYPE | 18 | 48 | 28 | 79 | 32 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 8(5Q35.3) MUTATED | 20 | 49 | 66 |
AMP PEAK 8(5Q35.3) WILD-TYPE | 73 | 102 | 60 |
P value = 0.0409 (Fisher's exact test), Q value = 0.079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 8(5Q35.3) MUTATED | 24 | 66 | 45 |
AMP PEAK 8(5Q35.3) WILD-TYPE | 69 | 95 | 71 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 9(6P25.2) MUTATED | 15 | 79 | 65 |
AMP PEAK 9(6P25.2) WILD-TYPE | 78 | 72 | 61 |
P value = 0.00015 (Fisher's exact test), Q value = 9e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 9(6P25.2) MUTATED | 23 | 79 | 57 |
AMP PEAK 9(6P25.2) WILD-TYPE | 70 | 82 | 59 |
P value = 0.0438 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 9(6P25.2) MUTATED | 32 | 33 | 38 | 22 | 34 |
AMP PEAK 9(6P25.2) WILD-TYPE | 35 | 53 | 33 | 49 | 35 |
P value = 0.0245 (Fisher's exact test), Q value = 0.053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 9(6P25.2) MUTATED | 24 | 16 | 45 | 46 | 28 |
AMP PEAK 9(6P25.2) WILD-TYPE | 30 | 40 | 69 | 38 | 28 |
P value = 0.015 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
AMP PEAK 9(6P25.2) MUTATED | 24 | 27 | 26 | 37 | 21 | 20 |
AMP PEAK 9(6P25.2) WILD-TYPE | 16 | 36 | 66 | 47 | 25 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 10(6P21.1) MUTATED | 17 | 79 | 62 |
AMP PEAK 10(6P21.1) WILD-TYPE | 76 | 72 | 64 |
P value = 0.00122 (Fisher's exact test), Q value = 0.0052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 10(6P21.1) MUTATED | 25 | 80 | 53 |
AMP PEAK 10(6P21.1) WILD-TYPE | 68 | 81 | 63 |
P value = 0.00369 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
AMP PEAK 10(6P21.1) MUTATED | 13 | 31 | 8 | 17 | 14 | 1 |
AMP PEAK 10(6P21.1) WILD-TYPE | 28 | 42 | 11 | 5 | 8 | 0 |
P value = 0.0138 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 10(6P21.1) MUTATED | 27 | 40 | 37 | 19 | 35 |
AMP PEAK 10(6P21.1) WILD-TYPE | 40 | 46 | 34 | 52 | 34 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 11(6Q12) MUTATED | 9 | 62 | 38 |
AMP PEAK 11(6Q12) WILD-TYPE | 84 | 89 | 88 |
P value = 0.042 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 11(6Q12) MUTATED | 18 | 52 | 39 |
AMP PEAK 11(6Q12) WILD-TYPE | 75 | 109 | 77 |
P value = 0.0311 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 11(6Q12) MUTATED | 24 | 22 | 30 | 14 | 19 |
AMP PEAK 11(6Q12) WILD-TYPE | 43 | 64 | 41 | 57 | 50 |
P value = 0.0406 (Fisher's exact test), Q value = 0.079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
AMP PEAK 11(6Q12) MUTATED | 17 | 18 | 18 | 22 | 18 | 15 |
AMP PEAK 11(6Q12) WILD-TYPE | 23 | 45 | 74 | 62 | 28 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 12(6Q12) MUTATED | 5 | 47 | 31 |
AMP PEAK 12(6Q12) WILD-TYPE | 88 | 104 | 95 |
P value = 0.00711 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 12(6Q12) MUTATED | 11 | 38 | 34 |
AMP PEAK 12(6Q12) WILD-TYPE | 82 | 123 | 82 |
P value = 0.0122 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
AMP PEAK 12(6Q12) MUTATED | 8 | 13 | 6 | 8 | 12 | 0 |
AMP PEAK 12(6Q12) WILD-TYPE | 33 | 60 | 13 | 14 | 10 | 1 |
P value = 0.0432 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
AMP PEAK 12(6Q12) MUTATED | 11 | 6 | 12 | 9 | 9 |
AMP PEAK 12(6Q12) WILD-TYPE | 28 | 39 | 26 | 9 | 29 |
P value = 0.00845 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 12(6Q12) MUTATED | 17 | 12 | 27 | 13 | 14 |
AMP PEAK 12(6Q12) WILD-TYPE | 50 | 74 | 44 | 58 | 55 |
P value = 0.00891 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 12(6Q12) MUTATED | 15 | 10 | 17 | 30 | 11 |
AMP PEAK 12(6Q12) WILD-TYPE | 39 | 46 | 97 | 54 | 45 |
P value = 0.00444 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 13(7Q31.2) MUTATED | 24 | 67 | 29 |
AMP PEAK 13(7Q31.2) WILD-TYPE | 69 | 94 | 87 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 14(8Q24.21) MUTATED | 45 | 79 | 107 |
AMP PEAK 14(8Q24.21) WILD-TYPE | 48 | 72 | 19 |
P value = 0.0483 (Fisher's exact test), Q value = 0.09
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 14(8Q24.21) MUTATED | 55 | 93 | 83 |
AMP PEAK 14(8Q24.21) WILD-TYPE | 38 | 68 | 33 |
P value = 0.00063 (Fisher's exact test), Q value = 0.003
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 14(8Q24.21) MUTATED | 44 | 36 | 50 | 47 | 49 |
AMP PEAK 14(8Q24.21) WILD-TYPE | 23 | 50 | 21 | 24 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 14(8Q24.21) MUTATED | 39 | 40 | 45 | 61 | 41 |
AMP PEAK 14(8Q24.21) WILD-TYPE | 15 | 16 | 69 | 23 | 15 |
P value = 0.00699 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 14(8Q24.21) MUTATED | 24 | 46 | 37 | 85 | 35 |
AMP PEAK 14(8Q24.21) WILD-TYPE | 20 | 49 | 19 | 37 | 13 |
P value = 7e-05 (Fisher's exact test), Q value = 0.00049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
AMP PEAK 14(8Q24.21) MUTATED | 52 | 36 | 70 | 18 | 41 |
AMP PEAK 14(8Q24.21) WILD-TYPE | 18 | 46 | 30 | 16 | 13 |
P value = 0.0292 (Fisher's exact test), Q value = 0.061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 15(9Q34.2) MUTATED | 5 | 25 | 17 |
AMP PEAK 15(9Q34.2) WILD-TYPE | 88 | 126 | 109 |
P value = 0.0267 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 15(9Q34.2) MUTATED | 11 | 15 | 12 | 5 | 3 |
AMP PEAK 15(9Q34.2) WILD-TYPE | 56 | 71 | 59 | 66 | 66 |
P value = 0.0133 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 15(9Q34.2) MUTATED | 11 | 15 | 9 | 10 | 2 |
AMP PEAK 15(9Q34.2) WILD-TYPE | 33 | 80 | 47 | 112 | 46 |
P value = 0.0209 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
AMP PEAK 15(9Q34.2) MUTATED | 12 | 17 | 9 | 5 | 2 |
AMP PEAK 15(9Q34.2) WILD-TYPE | 58 | 65 | 91 | 29 | 52 |
P value = 0.00395 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 16(10P15.1) MUTATED | 8 | 38 | 26 |
AMP PEAK 16(10P15.1) WILD-TYPE | 85 | 113 | 100 |
P value = 0.00673 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
AMP PEAK 16(10P15.1) MUTATED | 11 | 10 | 5 | 6 | 12 | 0 |
AMP PEAK 16(10P15.1) WILD-TYPE | 30 | 63 | 14 | 16 | 10 | 1 |
P value = 0.00644 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
AMP PEAK 16(10P15.1) MUTATED | 12 | 7 | 12 | 9 | 4 |
AMP PEAK 16(10P15.1) WILD-TYPE | 27 | 38 | 26 | 9 | 34 |
P value = 0.0367 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 16(10P15.1) MUTATED | 20 | 10 | 18 | 11 | 12 |
AMP PEAK 16(10P15.1) WILD-TYPE | 47 | 76 | 53 | 60 | 57 |
P value = 0.00334 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 16(10P15.1) MUTATED | 19 | 8 | 14 | 22 | 8 |
AMP PEAK 16(10P15.1) WILD-TYPE | 35 | 48 | 100 | 62 | 48 |
P value = 0.0076 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
AMP PEAK 16(10P15.1) MUTATED | 30 | 18 | 10 | 10 |
AMP PEAK 16(10P15.1) WILD-TYPE | 77 | 63 | 92 | 40 |
P value = 0.0232 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
AMP PEAK 16(10P15.1) MUTATED | 22 | 11 | 20 | 9 | 6 |
AMP PEAK 16(10P15.1) WILD-TYPE | 48 | 71 | 80 | 25 | 48 |
P value = 0.0405 (Fisher's exact test), Q value = 0.079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 17(11Q13.3) MUTATED | 14 | 31 | 12 |
AMP PEAK 17(11Q13.3) WILD-TYPE | 79 | 120 | 114 |
P value = 0.00416 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 17(11Q13.3) MUTATED | 17 | 18 | 10 | 6 | 4 |
AMP PEAK 17(11Q13.3) WILD-TYPE | 50 | 68 | 61 | 65 | 65 |
P value = 0.0173 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 17(11Q13.3) MUTATED | 10 | 7 | 25 | 11 | 2 |
AMP PEAK 17(11Q13.3) WILD-TYPE | 44 | 49 | 89 | 73 | 54 |
P value = 0.0127 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
AMP PEAK 17(11Q13.3) MUTATED | 10 | 16 | 13 | 5 | 6 | 7 |
AMP PEAK 17(11Q13.3) WILD-TYPE | 30 | 47 | 79 | 79 | 40 | 33 |
P value = 0.00313 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 17(11Q13.3) MUTATED | 11 | 23 | 5 | 16 | 2 |
AMP PEAK 17(11Q13.3) WILD-TYPE | 33 | 72 | 51 | 106 | 46 |
P value = 0.00011 (Fisher's exact test), Q value = 0.00071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
AMP PEAK 17(11Q13.3) MUTATED | 13 | 18 | 13 | 10 | 0 |
AMP PEAK 17(11Q13.3) WILD-TYPE | 57 | 64 | 87 | 24 | 54 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 18(13Q32.3) MUTATED | 1 | 42 | 24 |
AMP PEAK 18(13Q32.3) WILD-TYPE | 92 | 109 | 102 |
P value = 0.0377 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
AMP PEAK 18(13Q32.3) MUTATED | 8 | 3 | 9 | 7 | 7 |
AMP PEAK 18(13Q32.3) WILD-TYPE | 31 | 42 | 29 | 11 | 31 |
P value = 0.0096 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 18(13Q32.3) MUTATED | 14 | 12 | 23 | 9 | 8 |
AMP PEAK 18(13Q32.3) WILD-TYPE | 53 | 74 | 48 | 62 | 61 |
P value = 0.0134 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
AMP PEAK 18(13Q32.3) MUTATED | 13 | 11 | 13 | 8 | 13 | 9 |
AMP PEAK 18(13Q32.3) WILD-TYPE | 27 | 52 | 79 | 76 | 33 | 31 |
P value = 0.00629 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
AMP PEAK 18(13Q32.3) MUTATED | 29 | 12 | 10 | 12 |
AMP PEAK 18(13Q32.3) WILD-TYPE | 78 | 69 | 92 | 38 |
P value = 0.0357 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
AMP PEAK 18(13Q32.3) MUTATED | 18 | 13 | 18 | 10 | 4 |
AMP PEAK 18(13Q32.3) WILD-TYPE | 52 | 69 | 82 | 24 | 50 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 19(13Q33.3) MUTATED | 3 | 39 | 25 |
AMP PEAK 19(13Q33.3) WILD-TYPE | 90 | 112 | 101 |
P value = 0.0456 (Fisher's exact test), Q value = 0.086
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 19(13Q33.3) MUTATED | 11 | 27 | 29 |
AMP PEAK 19(13Q33.3) WILD-TYPE | 82 | 134 | 87 |
P value = 0.00128 (Fisher's exact test), Q value = 0.0054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 19(13Q33.3) MUTATED | 13 | 10 | 25 | 8 | 10 |
AMP PEAK 19(13Q33.3) WILD-TYPE | 54 | 76 | 46 | 63 | 59 |
P value = 0.00976 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
AMP PEAK 19(13Q33.3) MUTATED | 12 | 8 | 14 | 9 | 15 | 9 |
AMP PEAK 19(13Q33.3) WILD-TYPE | 28 | 55 | 78 | 75 | 31 | 31 |
P value = 0.00636 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
AMP PEAK 19(13Q33.3) MUTATED | 28 | 12 | 10 | 13 |
AMP PEAK 19(13Q33.3) WILD-TYPE | 79 | 69 | 92 | 37 |
P value = 0.0237 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 20(15Q26.3) MUTATED | 8 | 15 | 18 | 7 | 5 |
AMP PEAK 20(15Q26.3) WILD-TYPE | 59 | 71 | 53 | 64 | 64 |
P value = 0.0391 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 20(15Q26.3) MUTATED | 9 | 7 | 17 | 18 | 2 |
AMP PEAK 20(15Q26.3) WILD-TYPE | 45 | 49 | 97 | 66 | 54 |
P value = 0.0419 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 21(17P11.2) MUTATED | 5 | 23 | 18 |
AMP PEAK 21(17P11.2) WILD-TYPE | 88 | 138 | 98 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 22(17Q25.3) MUTATED | 18 | 82 | 45 |
AMP PEAK 22(17Q25.3) WILD-TYPE | 75 | 69 | 81 |
P value = 0.0486 (Fisher's exact test), Q value = 0.09
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 22(17Q25.3) MUTATED | 29 | 74 | 42 |
AMP PEAK 22(17Q25.3) WILD-TYPE | 64 | 87 | 74 |
P value = 0.013 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
AMP PEAK 22(17Q25.3) MUTATED | 21 | 28 | 8 | 7 | 17 | 0 |
AMP PEAK 22(17Q25.3) WILD-TYPE | 20 | 45 | 11 | 15 | 5 | 1 |
P value = 0.0314 (Fisher's exact test), Q value = 0.065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
AMP PEAK 22(17Q25.3) MUTATED | 14 | 15 | 25 | 9 | 18 |
AMP PEAK 22(17Q25.3) WILD-TYPE | 25 | 30 | 13 | 9 | 20 |
P value = 0.0114 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 22(17Q25.3) MUTATED | 34 | 36 | 24 | 17 | 31 |
AMP PEAK 22(17Q25.3) WILD-TYPE | 33 | 50 | 47 | 54 | 38 |
P value = 0.0105 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 22(17Q25.3) MUTATED | 28 | 12 | 49 | 29 | 24 |
AMP PEAK 22(17Q25.3) WILD-TYPE | 26 | 44 | 65 | 55 | 32 |
P value = 0.0074 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
AMP PEAK 22(17Q25.3) MUTATED | 22 | 30 | 29 | 38 | 10 | 15 |
AMP PEAK 22(17Q25.3) WILD-TYPE | 18 | 33 | 63 | 46 | 36 | 25 |
P value = 0.00149 (Fisher's exact test), Q value = 0.0062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 22(17Q25.3) MUTATED | 26 | 40 | 24 | 32 | 22 |
AMP PEAK 22(17Q25.3) WILD-TYPE | 18 | 55 | 32 | 90 | 26 |
P value = 0.0108 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
AMP PEAK 22(17Q25.3) MUTATED | 33 | 35 | 26 | 18 | 24 |
AMP PEAK 22(17Q25.3) WILD-TYPE | 37 | 47 | 74 | 16 | 30 |
P value = 0.0128 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 23(19P13.12) MUTATED | 10 | 26 | 33 |
AMP PEAK 23(19P13.12) WILD-TYPE | 83 | 125 | 93 |
P value = 0.00109 (Fisher's exact test), Q value = 0.0048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 23(19P13.12) MUTATED | 16 | 19 | 34 |
AMP PEAK 23(19P13.12) WILD-TYPE | 77 | 142 | 82 |
P value = 0.00057 (Fisher's exact test), Q value = 0.0028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 23(19P13.12) MUTATED | 15 | 10 | 20 | 19 | 4 |
AMP PEAK 23(19P13.12) WILD-TYPE | 52 | 76 | 51 | 52 | 65 |
P value = 0.00044 (Fisher's exact test), Q value = 0.0023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 23(19P13.12) MUTATED | 16 | 13 | 12 | 23 | 4 |
AMP PEAK 23(19P13.12) WILD-TYPE | 38 | 43 | 102 | 61 | 52 |
P value = 0.0031 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
AMP PEAK 23(19P13.12) MUTATED | 4 | 8 | 23 | 9 | 9 | 15 |
AMP PEAK 23(19P13.12) WILD-TYPE | 36 | 55 | 69 | 75 | 37 | 25 |
P value = 0.00232 (Fisher's exact test), Q value = 0.0084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 23(19P13.12) MUTATED | 3 | 20 | 14 | 29 | 2 |
AMP PEAK 23(19P13.12) WILD-TYPE | 41 | 75 | 42 | 93 | 46 |
P value = 0.00259 (Fisher's exact test), Q value = 0.0092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
AMP PEAK 23(19P13.12) MUTATED | 24 | 22 | 8 | 10 |
AMP PEAK 23(19P13.12) WILD-TYPE | 83 | 59 | 94 | 40 |
P value = 0.00127 (Fisher's exact test), Q value = 0.0054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
AMP PEAK 23(19P13.12) MUTATED | 18 | 14 | 27 | 2 | 3 |
AMP PEAK 23(19P13.12) WILD-TYPE | 52 | 68 | 73 | 32 | 51 |
P value = 0.0161 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 24(19Q13.11) MUTATED | 14 | 47 | 30 |
AMP PEAK 24(19Q13.11) WILD-TYPE | 79 | 104 | 96 |
P value = 0.0306 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
AMP PEAK 24(19Q13.11) MUTATED | 17 | 11 | 9 | 7 | 5 |
AMP PEAK 24(19Q13.11) WILD-TYPE | 22 | 34 | 29 | 11 | 33 |
P value = 0.00049 (Fisher's exact test), Q value = 0.0025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 24(19Q13.11) MUTATED | 22 | 16 | 25 | 21 | 6 |
AMP PEAK 24(19Q13.11) WILD-TYPE | 45 | 70 | 46 | 50 | 63 |
P value = 6e-04 (Fisher's exact test), Q value = 0.003
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 24(19Q13.11) MUTATED | 16 | 17 | 21 | 31 | 5 |
AMP PEAK 24(19Q13.11) WILD-TYPE | 38 | 39 | 93 | 53 | 51 |
P value = 0.0327 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
AMP PEAK 24(19Q13.11) MUTATED | 12 | 15 | 28 | 10 | 12 | 13 |
AMP PEAK 24(19Q13.11) WILD-TYPE | 28 | 48 | 64 | 74 | 34 | 27 |
P value = 0.0019 (Fisher's exact test), Q value = 0.0073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 24(19Q13.11) MUTATED | 14 | 23 | 18 | 33 | 2 |
AMP PEAK 24(19Q13.11) WILD-TYPE | 30 | 72 | 38 | 89 | 46 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
AMP PEAK 24(19Q13.11) MUTATED | 36 | 23 | 7 | 19 |
AMP PEAK 24(19Q13.11) WILD-TYPE | 71 | 58 | 95 | 31 |
P value = 0.00015 (Fisher's exact test), Q value = 9e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
AMP PEAK 24(19Q13.11) MUTATED | 24 | 20 | 29 | 10 | 2 |
AMP PEAK 24(19Q13.11) WILD-TYPE | 46 | 62 | 71 | 24 | 52 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 25(20Q13.13) MUTATED | 11 | 69 | 44 |
AMP PEAK 25(20Q13.13) WILD-TYPE | 82 | 82 | 82 |
P value = 0.0155 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
AMP PEAK 25(20Q13.13) MUTATED | 19 | 14 | 14 | 12 | 9 |
AMP PEAK 25(20Q13.13) WILD-TYPE | 20 | 31 | 24 | 6 | 29 |
P value = 0.017 (Fisher's exact test), Q value = 0.039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 25(20Q13.13) MUTATED | 26 | 29 | 32 | 23 | 13 |
AMP PEAK 25(20Q13.13) WILD-TYPE | 41 | 57 | 39 | 48 | 56 |
P value = 0.00025 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 25(20Q13.13) MUTATED | 19 | 19 | 37 | 41 | 7 |
AMP PEAK 25(20Q13.13) WILD-TYPE | 35 | 37 | 77 | 43 | 49 |
P value = 0.0117 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 25(20Q13.13) MUTATED | 21 | 29 | 24 | 41 | 8 |
AMP PEAK 25(20Q13.13) WILD-TYPE | 23 | 66 | 32 | 81 | 40 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
AMP PEAK 25(20Q13.13) MUTATED | 45 | 25 | 19 | 27 |
AMP PEAK 25(20Q13.13) WILD-TYPE | 62 | 56 | 83 | 23 |
P value = 0.0483 (Fisher's exact test), Q value = 0.09
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
AMP PEAK 25(20Q13.13) MUTATED | 28 | 24 | 37 | 16 | 11 |
AMP PEAK 25(20Q13.13) WILD-TYPE | 42 | 58 | 63 | 18 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 26(20Q13.33) MUTATED | 10 | 69 | 49 |
AMP PEAK 26(20Q13.33) WILD-TYPE | 83 | 82 | 77 |
P value = 0.0111 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
AMP PEAK 26(20Q13.33) MUTATED | 14 | 21 | 9 | 13 | 14 | 0 |
AMP PEAK 26(20Q13.33) WILD-TYPE | 27 | 52 | 10 | 9 | 8 | 1 |
P value = 0.00071 (Fisher's exact test), Q value = 0.0034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
AMP PEAK 26(20Q13.33) MUTATED | 22 | 12 | 15 | 13 | 9 |
AMP PEAK 26(20Q13.33) WILD-TYPE | 17 | 33 | 23 | 5 | 29 |
P value = 0.00487 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 26(20Q13.33) MUTATED | 25 | 30 | 36 | 22 | 14 |
AMP PEAK 26(20Q13.33) WILD-TYPE | 42 | 56 | 35 | 49 | 55 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 26(20Q13.33) MUTATED | 21 | 17 | 39 | 43 | 7 |
AMP PEAK 26(20Q13.33) WILD-TYPE | 33 | 39 | 75 | 41 | 49 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
AMP PEAK 26(20Q13.33) MUTATED | 48 | 25 | 20 | 27 |
AMP PEAK 26(20Q13.33) WILD-TYPE | 59 | 56 | 82 | 23 |
P value = 0.0018 (Fisher's exact test), Q value = 0.0071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
AMP PEAK 27(XQ28) MUTATED | 22 | 23 | 42 |
AMP PEAK 27(XQ28) WILD-TYPE | 71 | 128 | 84 |
P value = 0.0499 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
AMP PEAK 27(XQ28) MUTATED | 14 | 46 | 27 |
AMP PEAK 27(XQ28) WILD-TYPE | 79 | 115 | 89 |
P value = 0.0342 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
AMP PEAK 27(XQ28) MUTATED | 3 | 7 | 10 | 6 | 12 |
AMP PEAK 27(XQ28) WILD-TYPE | 36 | 38 | 28 | 12 | 26 |
P value = 0.0279 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
AMP PEAK 27(XQ28) MUTATED | 14 | 22 | 12 | 12 | 26 |
AMP PEAK 27(XQ28) WILD-TYPE | 53 | 64 | 59 | 59 | 43 |
P value = 0.0098 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
AMP PEAK 27(XQ28) MUTATED | 13 | 11 | 29 | 11 | 22 |
AMP PEAK 27(XQ28) WILD-TYPE | 41 | 45 | 85 | 73 | 34 |
P value = 0.00014 (Fisher's exact test), Q value = 0.00086
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
AMP PEAK 27(XQ28) MUTATED | 4 | 17 | 15 | 35 | 5 | 9 |
AMP PEAK 27(XQ28) WILD-TYPE | 36 | 46 | 77 | 49 | 41 | 31 |
P value = 0.00335 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
AMP PEAK 27(XQ28) MUTATED | 5 | 23 | 14 | 22 | 21 |
AMP PEAK 27(XQ28) WILD-TYPE | 39 | 72 | 42 | 100 | 27 |
P value = 0.0158 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
AMP PEAK 27(XQ28) MUTATED | 23 | 15 | 34 | 6 |
AMP PEAK 27(XQ28) WILD-TYPE | 84 | 66 | 68 | 44 |
P value = 0.00038 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
AMP PEAK 27(XQ28) MUTATED | 16 | 19 | 17 | 2 | 24 |
AMP PEAK 27(XQ28) WILD-TYPE | 54 | 63 | 83 | 32 | 30 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 1(1P36.31) MUTATED | 18 | 62 | 82 |
DEL PEAK 1(1P36.31) WILD-TYPE | 75 | 89 | 44 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 1(1P36.31) MUTATED | 28 | 61 | 73 |
DEL PEAK 1(1P36.31) WILD-TYPE | 65 | 100 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 1(1P36.31) MUTATED | 17 | 33 | 59 | 32 | 18 |
DEL PEAK 1(1P36.31) WILD-TYPE | 50 | 53 | 12 | 39 | 51 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 1(1P36.31) MUTATED | 24 | 24 | 40 | 57 | 14 |
DEL PEAK 1(1P36.31) WILD-TYPE | 30 | 32 | 74 | 27 | 42 |
P value = 0.00154 (Fisher's exact test), Q value = 0.0063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 1(1P36.31) MUTATED | 12 | 26 | 39 | 30 | 23 | 29 |
DEL PEAK 1(1P36.31) WILD-TYPE | 28 | 37 | 53 | 54 | 23 | 11 |
P value = 0.0013 (Fisher's exact test), Q value = 0.0054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 1(1P36.31) MUTATED | 14 | 37 | 31 | 65 | 12 |
DEL PEAK 1(1P36.31) WILD-TYPE | 30 | 58 | 25 | 57 | 36 |
P value = 0.00379 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 1(1P36.31) MUTATED | 56 | 39 | 30 | 25 |
DEL PEAK 1(1P36.31) WILD-TYPE | 51 | 42 | 72 | 25 |
P value = 0.0048 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 1(1P36.31) MUTATED | 33 | 34 | 57 | 11 | 15 |
DEL PEAK 1(1P36.31) WILD-TYPE | 37 | 48 | 43 | 23 | 39 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 2(1P36.11) MUTATED | 11 | 56 | 75 |
DEL PEAK 2(1P36.11) WILD-TYPE | 82 | 95 | 51 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 2(1P36.11) MUTATED | 24 | 48 | 70 |
DEL PEAK 2(1P36.11) WILD-TYPE | 69 | 113 | 46 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 2(1P36.11) MUTATED | 17 | 23 | 58 | 25 | 17 |
DEL PEAK 2(1P36.11) WILD-TYPE | 50 | 63 | 13 | 46 | 52 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 2(1P36.11) MUTATED | 22 | 19 | 31 | 54 | 14 |
DEL PEAK 2(1P36.11) WILD-TYPE | 32 | 37 | 83 | 30 | 42 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 2(1P36.11) MUTATED | 8 | 18 | 33 | 28 | 25 | 27 |
DEL PEAK 2(1P36.11) WILD-TYPE | 32 | 45 | 59 | 56 | 21 | 13 |
P value = 0.00011 (Fisher's exact test), Q value = 0.00071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 2(1P36.11) MUTATED | 9 | 30 | 25 | 64 | 11 |
DEL PEAK 2(1P36.11) WILD-TYPE | 35 | 65 | 31 | 58 | 37 |
P value = 0.00047 (Fisher's exact test), Q value = 0.0024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 2(1P36.11) MUTATED | 52 | 34 | 23 | 23 |
DEL PEAK 2(1P36.11) WILD-TYPE | 55 | 47 | 79 | 27 |
P value = 0.00015 (Fisher's exact test), Q value = 9e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 2(1P36.11) MUTATED | 30 | 26 | 55 | 7 | 14 |
DEL PEAK 2(1P36.11) WILD-TYPE | 40 | 56 | 45 | 27 | 40 |
P value = 0.0035 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 3(2Q22.1) MUTATED | 6 | 32 | 14 |
DEL PEAK 3(2Q22.1) WILD-TYPE | 87 | 119 | 112 |
P value = 0.00462 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 3(2Q22.1) MUTATED | 14 | 16 | 13 | 7 | 2 |
DEL PEAK 3(2Q22.1) WILD-TYPE | 53 | 70 | 58 | 64 | 67 |
P value = 7e-05 (Fisher's exact test), Q value = 0.00049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 4(2Q37.3) MUTATED | 5 | 39 | 18 |
DEL PEAK 4(2Q37.3) WILD-TYPE | 88 | 112 | 108 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 4(2Q37.3) MUTATED | 18 | 22 | 14 | 8 | 0 |
DEL PEAK 4(2Q37.3) WILD-TYPE | 49 | 64 | 57 | 63 | 69 |
P value = 0.00087 (Fisher's exact test), Q value = 0.0041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 4(2Q37.3) MUTATED | 12 | 9 | 28 | 12 | 1 |
DEL PEAK 4(2Q37.3) WILD-TYPE | 42 | 47 | 86 | 72 | 55 |
P value = 0.00967 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 4(2Q37.3) MUTATED | 11 | 16 | 16 | 15 | 3 |
DEL PEAK 4(2Q37.3) WILD-TYPE | 33 | 79 | 40 | 107 | 45 |
P value = 0.0021 (Fisher's exact test), Q value = 0.0077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 4(2Q37.3) MUTATED | 21 | 14 | 10 | 9 | 4 |
DEL PEAK 4(2Q37.3) WILD-TYPE | 49 | 68 | 90 | 25 | 50 |
P value = 0.00903 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 5(3P13) MUTATED | 20 | 21 | 32 |
DEL PEAK 5(3P13) WILD-TYPE | 73 | 140 | 84 |
P value = 0.0357 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 5(3P13) MUTATED | 8 | 8 | 5 | 6 | 9 | 0 |
DEL PEAK 5(3P13) WILD-TYPE | 33 | 65 | 14 | 16 | 13 | 1 |
P value = 0.023 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
DEL PEAK 5(3P13) MUTATED | 14 | 5 | 6 | 6 | 5 |
DEL PEAK 5(3P13) WILD-TYPE | 25 | 40 | 32 | 12 | 33 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 5(3P13) MUTATED | 13 | 10 | 26 | 18 | 5 |
DEL PEAK 5(3P13) WILD-TYPE | 54 | 76 | 45 | 53 | 64 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 5(3P13) MUTATED | 23 | 5 | 15 | 24 | 5 |
DEL PEAK 5(3P13) WILD-TYPE | 31 | 51 | 99 | 60 | 51 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 5(3P13) MUTATED | 5 | 8 | 20 | 9 | 9 | 20 |
DEL PEAK 5(3P13) WILD-TYPE | 35 | 55 | 72 | 75 | 37 | 20 |
P value = 0.0338 (Fisher's exact test), Q value = 0.068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 5(3P13) MUTATED | 5 | 17 | 12 | 33 | 4 |
DEL PEAK 5(3P13) WILD-TYPE | 39 | 78 | 44 | 89 | 44 |
P value = 0.00942 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 5(3P13) MUTATED | 29 | 19 | 10 | 9 |
DEL PEAK 5(3P13) WILD-TYPE | 78 | 62 | 92 | 41 |
P value = 0.00163 (Fisher's exact test), Q value = 0.0067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 5(3P13) MUTATED | 20 | 12 | 28 | 3 | 4 |
DEL PEAK 5(3P13) WILD-TYPE | 50 | 70 | 72 | 31 | 50 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 6(4P16.3) MUTATED | 4 | 51 | 30 |
DEL PEAK 6(4P16.3) WILD-TYPE | 89 | 100 | 96 |
P value = 0.0107 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 6(4P16.3) MUTATED | 8 | 14 | 1 | 10 | 9 | 0 |
DEL PEAK 6(4P16.3) WILD-TYPE | 33 | 59 | 18 | 12 | 13 | 1 |
P value = 0.027 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 6(4P16.3) MUTATED | 6 | 20 | 20 | 32 | 6 |
DEL PEAK 6(4P16.3) WILD-TYPE | 38 | 75 | 36 | 90 | 42 |
P value = 0.00541 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 6(4P16.3) MUTATED | 26 | 20 | 22 | 4 | 6 |
DEL PEAK 6(4P16.3) WILD-TYPE | 44 | 62 | 78 | 30 | 48 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 7(4Q21.3) MUTATED | 7 | 108 | 56 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 86 | 43 | 70 |
P value = 0.00107 (Fisher's exact test), Q value = 0.0048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 7(4Q21.3) MUTATED | 35 | 66 | 70 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 58 | 95 | 46 |
P value = 0.0208 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 7(4Q21.3) MUTATED | 17 | 28 | 11 | 14 | 16 | 0 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 24 | 45 | 8 | 8 | 6 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 7(4Q21.3) MUTATED | 39 | 43 | 52 | 20 | 15 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 28 | 43 | 19 | 51 | 54 |
P value = 0.00026 (Fisher's exact test), Q value = 0.0015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 7(4Q21.3) MUTATED | 28 | 22 | 55 | 51 | 13 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 26 | 34 | 59 | 33 | 43 |
P value = 0.00112 (Fisher's exact test), Q value = 0.0048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 7(4Q21.3) MUTATED | 20 | 28 | 39 | 27 | 30 | 26 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 20 | 35 | 53 | 57 | 16 | 14 |
P value = 0.00175 (Fisher's exact test), Q value = 0.007
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 7(4Q21.3) MUTATED | 20 | 45 | 32 | 63 | 10 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 24 | 50 | 24 | 59 | 38 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 7(4Q21.3) MUTATED | 62 | 33 | 34 | 34 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 45 | 48 | 68 | 16 |
P value = 0.00014 (Fisher's exact test), Q value = 0.00086
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 7(4Q21.3) MUTATED | 45 | 42 | 50 | 14 | 12 |
DEL PEAK 7(4Q21.3) WILD-TYPE | 25 | 40 | 50 | 20 | 42 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 8(4Q24) MUTATED | 5 | 111 | 57 |
DEL PEAK 8(4Q24) WILD-TYPE | 88 | 40 | 69 |
P value = 0.00102 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 8(4Q24) MUTATED | 36 | 66 | 71 |
DEL PEAK 8(4Q24) WILD-TYPE | 57 | 95 | 45 |
P value = 0.0376 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 8(4Q24) MUTATED | 17 | 30 | 11 | 14 | 16 | 0 |
DEL PEAK 8(4Q24) WILD-TYPE | 24 | 43 | 8 | 8 | 6 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 8(4Q24) MUTATED | 38 | 43 | 52 | 22 | 15 |
DEL PEAK 8(4Q24) WILD-TYPE | 29 | 43 | 19 | 49 | 54 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 8(4Q24) MUTATED | 29 | 23 | 54 | 52 | 12 |
DEL PEAK 8(4Q24) WILD-TYPE | 25 | 33 | 60 | 32 | 44 |
P value = 0.00186 (Fisher's exact test), Q value = 0.0072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 8(4Q24) MUTATED | 21 | 27 | 40 | 28 | 30 | 26 |
DEL PEAK 8(4Q24) WILD-TYPE | 19 | 36 | 52 | 56 | 16 | 14 |
P value = 0.00019 (Fisher's exact test), Q value = 0.0011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 8(4Q24) MUTATED | 23 | 43 | 33 | 64 | 9 |
DEL PEAK 8(4Q24) WILD-TYPE | 21 | 52 | 23 | 58 | 39 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 8(4Q24) MUTATED | 61 | 34 | 34 | 36 |
DEL PEAK 8(4Q24) WILD-TYPE | 46 | 47 | 68 | 14 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 8(4Q24) MUTATED | 45 | 42 | 50 | 17 | 11 |
DEL PEAK 8(4Q24) WILD-TYPE | 25 | 40 | 50 | 17 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 9(4Q35.1) MUTATED | 9 | 102 | 61 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 84 | 49 | 65 |
P value = 0.00048 (Fisher's exact test), Q value = 0.0024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 9(4Q35.1) MUTATED | 33 | 68 | 71 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 60 | 93 | 45 |
P value = 0.0328 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 9(4Q35.1) MUTATED | 16 | 28 | 10 | 13 | 16 | 0 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 25 | 45 | 9 | 9 | 6 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 9(4Q35.1) MUTATED | 39 | 39 | 50 | 21 | 20 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 28 | 47 | 21 | 50 | 49 |
P value = 0.00072 (Fisher's exact test), Q value = 0.0034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 9(4Q35.1) MUTATED | 28 | 22 | 48 | 54 | 17 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 26 | 34 | 66 | 30 | 39 |
P value = 0.00207 (Fisher's exact test), Q value = 0.0077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 9(4Q35.1) MUTATED | 22 | 26 | 36 | 31 | 29 | 27 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 18 | 37 | 56 | 53 | 17 | 13 |
P value = 0.00622 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 9(4Q35.1) MUTATED | 21 | 41 | 32 | 65 | 12 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 23 | 54 | 24 | 57 | 36 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 9(4Q35.1) MUTATED | 60 | 36 | 32 | 33 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 47 | 45 | 70 | 17 |
P value = 0.00181 (Fisher's exact test), Q value = 0.0071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 9(4Q35.1) MUTATED | 42 | 39 | 51 | 16 | 13 |
DEL PEAK 9(4Q35.1) WILD-TYPE | 28 | 43 | 49 | 18 | 41 |
P value = 0.00165 (Fisher's exact test), Q value = 0.0067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 10(6Q27) MUTATED | 20 | 64 | 52 |
DEL PEAK 10(6Q27) WILD-TYPE | 73 | 87 | 74 |
P value = 0.00537 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 10(6Q27) MUTATED | 23 | 72 | 41 |
DEL PEAK 10(6Q27) WILD-TYPE | 70 | 89 | 75 |
P value = 0.0296 (Fisher's exact test), Q value = 0.062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 10(6Q27) MUTATED | 19 | 20 | 23 | 35 | 15 | 20 |
DEL PEAK 10(6Q27) WILD-TYPE | 21 | 43 | 69 | 49 | 31 | 20 |
P value = 0.0403 (Fisher's exact test), Q value = 0.079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 10(6Q27) MUTATED | 20 | 25 | 18 | 45 | 24 |
DEL PEAK 10(6Q27) WILD-TYPE | 24 | 70 | 38 | 77 | 24 |
P value = 0.0399 (Fisher's exact test), Q value = 0.078
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 11(7Q36.3) MUTATED | 8 | 9 | 17 |
DEL PEAK 11(7Q36.3) WILD-TYPE | 85 | 152 | 99 |
P value = 0.0417 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 11(7Q36.3) MUTATED | 10 | 4 | 11 | 6 | 3 |
DEL PEAK 11(7Q36.3) WILD-TYPE | 57 | 82 | 60 | 65 | 66 |
P value = 3e-04 (Fisher's exact test), Q value = 0.0017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 11(7Q36.3) MUTATED | 19 | 5 | 2 | 7 |
DEL PEAK 11(7Q36.3) WILD-TYPE | 88 | 76 | 100 | 43 |
P value = 0.00772 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 11(7Q36.3) MUTATED | 11 | 8 | 8 | 6 | 0 |
DEL PEAK 11(7Q36.3) WILD-TYPE | 59 | 74 | 92 | 28 | 54 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 12(8P23.2) MUTATED | 46 | 96 | 105 |
DEL PEAK 12(8P23.2) WILD-TYPE | 47 | 55 | 21 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 13(8P12) MUTATED | 44 | 91 | 107 |
DEL PEAK 13(8P12) WILD-TYPE | 49 | 60 | 19 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 14(9P21.3) MUTATED | 13 | 76 | 61 |
DEL PEAK 14(9P21.3) WILD-TYPE | 80 | 75 | 65 |
P value = 0.025 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 14(9P21.3) MUTATED | 34 | 57 | 59 |
DEL PEAK 14(9P21.3) WILD-TYPE | 59 | 104 | 57 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 14(9P21.3) MUTATED | 31 | 29 | 45 | 27 | 15 |
DEL PEAK 14(9P21.3) WILD-TYPE | 36 | 57 | 26 | 44 | 54 |
P value = 0.00168 (Fisher's exact test), Q value = 0.0068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 14(9P21.3) MUTATED | 28 | 20 | 38 | 46 | 15 |
DEL PEAK 14(9P21.3) WILD-TYPE | 26 | 36 | 76 | 38 | 41 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 14(9P21.3) MUTATED | 20 | 16 | 35 | 26 | 31 | 21 |
DEL PEAK 14(9P21.3) WILD-TYPE | 20 | 47 | 57 | 58 | 15 | 19 |
P value = 0.00194 (Fisher's exact test), Q value = 0.0073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 14(9P21.3) MUTATED | 20 | 31 | 29 | 59 | 10 |
DEL PEAK 14(9P21.3) WILD-TYPE | 24 | 64 | 27 | 63 | 38 |
P value = 0.0204 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 14(9P21.3) MUTATED | 49 | 30 | 34 | 29 |
DEL PEAK 14(9P21.3) WILD-TYPE | 58 | 51 | 68 | 21 |
P value = 0.00513 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 14(9P21.3) MUTATED | 40 | 28 | 45 | 15 | 14 |
DEL PEAK 14(9P21.3) WILD-TYPE | 30 | 54 | 55 | 19 | 40 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 15(9Q31.3) MUTATED | 10 | 66 | 43 |
DEL PEAK 15(9Q31.3) WILD-TYPE | 83 | 85 | 83 |
P value = 0.00891 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 15(9Q31.3) MUTATED | 23 | 46 | 50 |
DEL PEAK 15(9Q31.3) WILD-TYPE | 70 | 115 | 66 |
P value = 0.00096 (Fisher's exact test), Q value = 0.0044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 15(9Q31.3) MUTATED | 25 | 29 | 31 | 24 | 9 |
DEL PEAK 15(9Q31.3) WILD-TYPE | 42 | 57 | 40 | 47 | 60 |
P value = 0.00044 (Fisher's exact test), Q value = 0.0023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 15(9Q31.3) MUTATED | 21 | 16 | 38 | 37 | 6 |
DEL PEAK 15(9Q31.3) WILD-TYPE | 33 | 40 | 76 | 47 | 50 |
P value = 0.0261 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 15(9Q31.3) MUTATED | 17 | 19 | 29 | 16 | 17 | 18 |
DEL PEAK 15(9Q31.3) WILD-TYPE | 23 | 44 | 63 | 68 | 29 | 22 |
P value = 0.00669 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 15(9Q31.3) MUTATED | 17 | 30 | 21 | 43 | 5 |
DEL PEAK 15(9Q31.3) WILD-TYPE | 27 | 65 | 35 | 79 | 43 |
P value = 0.00017 (Fisher's exact test), Q value = 0.001
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 15(9Q31.3) MUTATED | 29 | 25 | 36 | 16 | 5 |
DEL PEAK 15(9Q31.3) WILD-TYPE | 41 | 57 | 64 | 18 | 49 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 16(10Q23.31) MUTATED | 11 | 71 | 15 |
DEL PEAK 16(10Q23.31) WILD-TYPE | 82 | 80 | 111 |
P value = 0.0143 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 16(10Q23.31) MUTATED | 32 | 45 | 20 |
DEL PEAK 16(10Q23.31) WILD-TYPE | 61 | 116 | 96 |
P value = 0.00046 (Fisher's exact test), Q value = 0.0024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 16(10Q23.31) MUTATED | 19 | 17 | 1 | 7 | 13 | 0 |
DEL PEAK 16(10Q23.31) WILD-TYPE | 22 | 56 | 18 | 15 | 9 | 1 |
P value = 0.004 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
DEL PEAK 16(10Q23.31) MUTATED | 13 | 7 | 19 | 9 | 9 |
DEL PEAK 16(10Q23.31) WILD-TYPE | 26 | 38 | 19 | 9 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 16(10Q23.31) MUTATED | 38 | 29 | 6 | 16 | 5 |
DEL PEAK 16(10Q23.31) WILD-TYPE | 29 | 57 | 65 | 55 | 64 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 16(10Q23.31) MUTATED | 27 | 9 | 41 | 11 | 6 |
DEL PEAK 16(10Q23.31) WILD-TYPE | 27 | 47 | 73 | 73 | 50 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 16(10Q23.31) MUTATED | 15 | 33 | 15 | 11 | 9 | 14 |
DEL PEAK 16(10Q23.31) WILD-TYPE | 25 | 30 | 77 | 73 | 37 | 26 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 16(10Q23.31) MUTATED | 15 | 41 | 13 | 25 | 3 |
DEL PEAK 16(10Q23.31) WILD-TYPE | 29 | 54 | 43 | 97 | 45 |
P value = 0.0149 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 16(10Q23.31) MUTATED | 42 | 19 | 21 | 12 |
DEL PEAK 16(10Q23.31) WILD-TYPE | 65 | 62 | 81 | 38 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 16(10Q23.31) MUTATED | 21 | 38 | 20 | 13 | 2 |
DEL PEAK 16(10Q23.31) WILD-TYPE | 49 | 44 | 80 | 21 | 52 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 17(10Q26.13) MUTATED | 15 | 75 | 15 |
DEL PEAK 17(10Q26.13) WILD-TYPE | 78 | 76 | 111 |
P value = 0.0259 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 17(10Q26.13) MUTATED | 36 | 44 | 25 |
DEL PEAK 17(10Q26.13) WILD-TYPE | 57 | 117 | 91 |
P value = 0.00205 (Fisher's exact test), Q value = 0.0076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 17(10Q26.13) MUTATED | 17 | 18 | 2 | 8 | 14 | 0 |
DEL PEAK 17(10Q26.13) WILD-TYPE | 24 | 55 | 17 | 14 | 8 | 1 |
P value = 0.0104 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
DEL PEAK 17(10Q26.13) MUTATED | 14 | 7 | 19 | 8 | 11 |
DEL PEAK 17(10Q26.13) WILD-TYPE | 25 | 38 | 19 | 10 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 17(10Q26.13) MUTATED | 37 | 32 | 10 | 18 | 5 |
DEL PEAK 17(10Q26.13) WILD-TYPE | 30 | 54 | 61 | 53 | 64 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 17(10Q26.13) MUTATED | 30 | 11 | 41 | 14 | 6 |
DEL PEAK 17(10Q26.13) WILD-TYPE | 24 | 45 | 73 | 70 | 50 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 17(10Q26.13) MUTATED | 13 | 32 | 19 | 13 | 11 | 17 |
DEL PEAK 17(10Q26.13) WILD-TYPE | 27 | 31 | 73 | 71 | 35 | 23 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 17(10Q26.13) MUTATED | 14 | 45 | 12 | 31 | 3 |
DEL PEAK 17(10Q26.13) WILD-TYPE | 30 | 50 | 44 | 91 | 45 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 17(10Q26.13) MUTATED | 22 | 40 | 25 | 13 | 2 |
DEL PEAK 17(10Q26.13) WILD-TYPE | 48 | 42 | 75 | 21 | 52 |
P value = 0.0158 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 18(11Q14.1) MUTATED | 10 | 37 | 30 |
DEL PEAK 18(11Q14.1) WILD-TYPE | 83 | 114 | 96 |
P value = 0.0085 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 18(11Q14.1) MUTATED | 33 | 13 | 13 | 12 |
DEL PEAK 18(11Q14.1) WILD-TYPE | 74 | 68 | 89 | 38 |
P value = 0.0153 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 18(11Q14.1) MUTATED | 23 | 21 | 15 | 6 | 6 |
DEL PEAK 18(11Q14.1) WILD-TYPE | 47 | 61 | 85 | 28 | 48 |
P value = 0.00045 (Fisher's exact test), Q value = 0.0023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 19(11Q23.3) MUTATED | 10 | 45 | 38 |
DEL PEAK 19(11Q23.3) WILD-TYPE | 83 | 106 | 88 |
P value = 0.0424 (Fisher's exact test), Q value = 0.081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 19(11Q23.3) MUTATED | 16 | 8 | 31 | 28 | 9 |
DEL PEAK 19(11Q23.3) WILD-TYPE | 38 | 48 | 83 | 56 | 47 |
P value = 0.0136 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 19(11Q23.3) MUTATED | 39 | 17 | 18 | 12 |
DEL PEAK 19(11Q23.3) WILD-TYPE | 68 | 64 | 84 | 38 |
P value = 0.00225 (Fisher's exact test), Q value = 0.0082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 19(11Q23.3) MUTATED | 27 | 27 | 20 | 5 | 7 |
DEL PEAK 19(11Q23.3) WILD-TYPE | 43 | 55 | 80 | 29 | 47 |
P value = 0.00103 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 20(12P12.1) MUTATED | 9 | 44 | 25 |
DEL PEAK 20(12P12.1) WILD-TYPE | 84 | 107 | 101 |
P value = 0.00247 (Fisher's exact test), Q value = 0.0088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 20(12P12.1) MUTATED | 24 | 24 | 10 | 11 | 9 |
DEL PEAK 20(12P12.1) WILD-TYPE | 43 | 62 | 61 | 60 | 60 |
P value = 0.031 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 20(12P12.1) MUTATED | 14 | 27 | 8 | 21 | 6 |
DEL PEAK 20(12P12.1) WILD-TYPE | 30 | 68 | 48 | 101 | 42 |
P value = 0.033 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 20(12P12.1) MUTATED | 11 | 26 | 16 | 11 | 10 |
DEL PEAK 20(12P12.1) WILD-TYPE | 59 | 56 | 84 | 23 | 44 |
P value = 0.00338 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 21(12Q24.33) MUTATED | 7 | 35 | 17 |
DEL PEAK 21(12Q24.33) WILD-TYPE | 86 | 116 | 109 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 22(13Q14.2) MUTATED | 21 | 109 | 49 |
DEL PEAK 22(13Q14.2) WILD-TYPE | 72 | 42 | 77 |
P value = 0.0348 (Fisher's exact test), Q value = 0.07
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 22(13Q14.2) MUTATED | 22 | 26 | 12 | 10 | 15 | 0 |
DEL PEAK 22(13Q14.2) WILD-TYPE | 19 | 47 | 7 | 12 | 7 | 1 |
P value = 0.0447 (Fisher's exact test), Q value = 0.084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
DEL PEAK 22(13Q14.2) MUTATED | 25 | 14 | 20 | 9 | 17 |
DEL PEAK 22(13Q14.2) WILD-TYPE | 14 | 31 | 18 | 9 | 21 |
P value = 4e-04 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 22(13Q14.2) MUTATED | 41 | 45 | 41 | 30 | 19 |
DEL PEAK 22(13Q14.2) WILD-TYPE | 26 | 41 | 30 | 41 | 50 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 22(13Q14.2) MUTATED | 34 | 15 | 67 | 46 | 14 |
DEL PEAK 22(13Q14.2) WILD-TYPE | 20 | 41 | 47 | 38 | 42 |
P value = 0.00176 (Fisher's exact test), Q value = 0.007
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 22(13Q14.2) MUTATED | 26 | 36 | 45 | 26 | 20 | 24 |
DEL PEAK 22(13Q14.2) WILD-TYPE | 14 | 27 | 47 | 58 | 26 | 16 |
P value = 0.00069 (Fisher's exact test), Q value = 0.0033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 22(13Q14.2) MUTATED | 28 | 53 | 26 | 59 | 11 |
DEL PEAK 22(13Q14.2) WILD-TYPE | 16 | 42 | 30 | 63 | 37 |
P value = 0.0171 (Fisher's exact test), Q value = 0.039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 22(13Q14.2) MUTATED | 63 | 42 | 38 | 25 |
DEL PEAK 22(13Q14.2) WILD-TYPE | 44 | 39 | 64 | 25 |
P value = 0.00024 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 22(13Q14.2) MUTATED | 37 | 48 | 49 | 22 | 12 |
DEL PEAK 22(13Q14.2) WILD-TYPE | 33 | 34 | 51 | 12 | 42 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 23(14Q23.3) MUTATED | 9 | 83 | 39 |
DEL PEAK 23(14Q23.3) WILD-TYPE | 84 | 68 | 87 |
P value = 0.00244 (Fisher's exact test), Q value = 0.0088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 23(14Q23.3) MUTATED | 24 | 17 | 7 | 8 | 12 | 0 |
DEL PEAK 23(14Q23.3) WILD-TYPE | 17 | 56 | 12 | 14 | 10 | 1 |
P value = 0.00389 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
DEL PEAK 23(14Q23.3) MUTATED | 15 | 10 | 24 | 7 | 12 |
DEL PEAK 23(14Q23.3) WILD-TYPE | 24 | 35 | 14 | 11 | 26 |
P value = 0.00192 (Fisher's exact test), Q value = 0.0073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 23(14Q23.3) MUTATED | 36 | 23 | 29 | 24 | 17 |
DEL PEAK 23(14Q23.3) WILD-TYPE | 31 | 63 | 42 | 47 | 52 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 23(14Q23.3) MUTATED | 34 | 12 | 38 | 32 | 13 |
DEL PEAK 23(14Q23.3) WILD-TYPE | 20 | 44 | 76 | 52 | 43 |
P value = 0.0124 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 23(14Q23.3) MUTATED | 21 | 26 | 26 | 21 | 17 | 19 |
DEL PEAK 23(14Q23.3) WILD-TYPE | 19 | 37 | 66 | 63 | 29 | 21 |
P value = 0.00427 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 23(14Q23.3) MUTATED | 52 | 29 | 25 | 19 |
DEL PEAK 23(14Q23.3) WILD-TYPE | 55 | 52 | 77 | 31 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 24(14Q32.33) MUTATED | 10 | 83 | 40 |
DEL PEAK 24(14Q32.33) WILD-TYPE | 83 | 68 | 86 |
P value = 0.0137 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 24(14Q32.33) MUTATED | 21 | 18 | 8 | 8 | 13 | 0 |
DEL PEAK 24(14Q32.33) WILD-TYPE | 20 | 55 | 11 | 14 | 9 | 1 |
P value = 0.00462 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 24(14Q32.33) MUTATED | 35 | 24 | 30 | 25 | 17 |
DEL PEAK 24(14Q32.33) WILD-TYPE | 32 | 62 | 41 | 46 | 52 |
P value = 0.00013 (Fisher's exact test), Q value = 0.00082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 24(14Q32.33) MUTATED | 33 | 12 | 37 | 35 | 14 |
DEL PEAK 24(14Q32.33) WILD-TYPE | 21 | 44 | 77 | 49 | 42 |
P value = 0.0134 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 24(14Q32.33) MUTATED | 48 | 32 | 25 | 21 |
DEL PEAK 24(14Q32.33) WILD-TYPE | 59 | 49 | 77 | 29 |
P value = 0.0163 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 24(14Q32.33) MUTATED | 32 | 23 | 41 | 17 | 13 |
DEL PEAK 24(14Q32.33) WILD-TYPE | 38 | 59 | 59 | 17 | 41 |
P value = 0.00061 (Fisher's exact test), Q value = 0.003
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 25(15Q26.3) MUTATED | 11 | 47 | 21 |
DEL PEAK 25(15Q26.3) WILD-TYPE | 82 | 104 | 105 |
P value = 0.0229 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 25(15Q26.3) MUTATED | 14 | 11 | 4 | 3 | 10 | 0 |
DEL PEAK 25(15Q26.3) WILD-TYPE | 27 | 62 | 15 | 19 | 12 | 1 |
P value = 0.00116 (Fisher's exact test), Q value = 0.005
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
DEL PEAK 25(15Q26.3) MUTATED | 9 | 3 | 17 | 3 | 10 |
DEL PEAK 25(15Q26.3) WILD-TYPE | 30 | 42 | 21 | 15 | 28 |
P value = 0.00875 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 25(15Q26.3) MUTATED | 25 | 17 | 16 | 11 | 9 |
DEL PEAK 25(15Q26.3) WILD-TYPE | 42 | 69 | 55 | 60 | 60 |
P value = 0.009 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 25(15Q26.3) MUTATED | 21 | 6 | 22 | 19 | 10 |
DEL PEAK 25(15Q26.3) WILD-TYPE | 33 | 50 | 92 | 65 | 46 |
P value = 0.00237 (Fisher's exact test), Q value = 0.0086
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 25(15Q26.3) MUTATED | 32 | 11 | 15 | 17 |
DEL PEAK 25(15Q26.3) WILD-TYPE | 75 | 70 | 87 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 26(16Q23.1) MUTATED | 8 | 86 | 68 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 85 | 65 | 58 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 26(16Q23.1) MUTATED | 30 | 56 | 76 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 63 | 105 | 40 |
P value = 0.00103 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 26(16Q23.1) MUTATED | 16 | 23 | 13 | 13 | 16 | 0 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 25 | 50 | 6 | 9 | 6 | 1 |
P value = 6e-04 (Fisher's exact test), Q value = 0.003
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
DEL PEAK 26(16Q23.1) MUTATED | 22 | 11 | 20 | 14 | 14 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 17 | 34 | 18 | 4 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 26(16Q23.1) MUTATED | 36 | 34 | 60 | 20 | 10 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 31 | 52 | 11 | 51 | 59 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 26(16Q23.1) MUTATED | 25 | 18 | 52 | 57 | 8 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 29 | 38 | 62 | 27 | 48 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 26(16Q23.1) MUTATED | 19 | 28 | 32 | 24 | 32 | 25 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 21 | 35 | 60 | 60 | 14 | 15 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 26(16Q23.1) MUTATED | 19 | 40 | 33 | 62 | 6 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 25 | 55 | 23 | 60 | 42 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 26(16Q23.1) MUTATED | 61 | 33 | 28 | 32 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 46 | 48 | 74 | 18 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 26(16Q23.1) MUTATED | 44 | 36 | 50 | 14 | 10 |
DEL PEAK 26(16Q23.1) WILD-TYPE | 26 | 46 | 50 | 20 | 44 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 27(17P13.1) MUTATED | 37 | 137 | 52 |
DEL PEAK 27(17P13.1) WILD-TYPE | 56 | 14 | 74 |
P value = 0.02 (Fisher's exact test), Q value = 0.045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 27(17P13.1) MUTATED | 31 | 40 | 8 | 17 | 16 | 0 |
DEL PEAK 27(17P13.1) WILD-TYPE | 10 | 33 | 11 | 5 | 6 | 1 |
P value = 0.00187 (Fisher's exact test), Q value = 0.0072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
DEL PEAK 27(17P13.1) MUTATED | 21 | 21 | 33 | 12 | 25 |
DEL PEAK 27(17P13.1) WILD-TYPE | 18 | 24 | 5 | 6 | 13 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 27(17P13.1) MUTATED | 53 | 63 | 37 | 35 | 33 |
DEL PEAK 27(17P13.1) WILD-TYPE | 14 | 23 | 34 | 36 | 36 |
P value = 7e-05 (Fisher's exact test), Q value = 0.00049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 27(17P13.1) MUTATED | 40 | 28 | 85 | 42 | 26 |
DEL PEAK 27(17P13.1) WILD-TYPE | 14 | 28 | 29 | 42 | 30 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 27(17P13.1) MUTATED | 35 | 49 | 48 | 40 | 27 | 25 |
DEL PEAK 27(17P13.1) WILD-TYPE | 5 | 14 | 44 | 44 | 19 | 15 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 27(17P13.1) MUTATED | 38 | 67 | 30 | 66 | 23 |
DEL PEAK 27(17P13.1) WILD-TYPE | 6 | 28 | 26 | 56 | 25 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 27(17P13.1) MUTATED | 39 | 65 | 55 | 30 | 25 |
DEL PEAK 27(17P13.1) WILD-TYPE | 31 | 17 | 45 | 4 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 28(17P11.2) MUTATED | 32 | 119 | 44 |
DEL PEAK 28(17P11.2) WILD-TYPE | 61 | 32 | 82 |
P value = 0.02 (Fisher's exact test), Q value = 0.045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
DEL PEAK 28(17P11.2) MUTATED | 16 | 20 | 28 | 12 | 22 |
DEL PEAK 28(17P11.2) WILD-TYPE | 23 | 25 | 10 | 6 | 16 |
P value = 0.00024 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 28(17P11.2) MUTATED | 49 | 52 | 32 | 32 | 27 |
DEL PEAK 28(17P11.2) WILD-TYPE | 18 | 34 | 39 | 39 | 42 |
P value = 0.00831 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 28(17P11.2) MUTATED | 37 | 27 | 68 | 37 | 23 |
DEL PEAK 28(17P11.2) WILD-TYPE | 17 | 29 | 46 | 47 | 33 |
P value = 0.00097 (Fisher's exact test), Q value = 0.0044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 40 | 63 | 92 | 84 | 46 | 40 |
DEL PEAK 28(17P11.2) MUTATED | 32 | 39 | 41 | 36 | 23 | 22 |
DEL PEAK 28(17P11.2) WILD-TYPE | 8 | 24 | 51 | 48 | 23 | 18 |
P value = 0.00031 (Fisher's exact test), Q value = 0.0017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 44 | 95 | 56 | 122 | 48 |
DEL PEAK 28(17P11.2) MUTATED | 36 | 54 | 25 | 56 | 22 |
DEL PEAK 28(17P11.2) WILD-TYPE | 8 | 41 | 31 | 66 | 26 |
P value = 0.00037 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 28(17P11.2) MUTATED | 34 | 52 | 48 | 28 | 22 |
DEL PEAK 28(17P11.2) WILD-TYPE | 36 | 30 | 52 | 6 | 32 |
P value = 0.0235 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 29(18Q21.2) MUTATED | 14 | 45 | 35 |
DEL PEAK 29(18Q21.2) WILD-TYPE | 79 | 106 | 91 |
P value = 0.00012 (Fisher's exact test), Q value = 0.00076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 29(18Q21.2) MUTATED | 14 | 34 | 46 |
DEL PEAK 29(18Q21.2) WILD-TYPE | 79 | 127 | 70 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 29(18Q21.2) MUTATED | 9 | 5 | 28 | 39 | 13 |
DEL PEAK 29(18Q21.2) WILD-TYPE | 45 | 51 | 86 | 45 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 30(19P13.3) MUTATED | 6 | 61 | 20 |
DEL PEAK 30(19P13.3) WILD-TYPE | 87 | 90 | 106 |
P value = 0.026 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 39 | 45 | 38 | 18 | 38 |
DEL PEAK 30(19P13.3) MUTATED | 8 | 5 | 16 | 4 | 9 |
DEL PEAK 30(19P13.3) WILD-TYPE | 31 | 40 | 22 | 14 | 29 |
P value = 0.00498 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 30(19P13.3) MUTATED | 28 | 17 | 17 | 12 | 12 |
DEL PEAK 30(19P13.3) WILD-TYPE | 39 | 69 | 54 | 59 | 57 |
P value = 0.00272 (Fisher's exact test), Q value = 0.0096
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 30(19P13.3) MUTATED | 22 | 9 | 23 | 25 | 7 |
DEL PEAK 30(19P13.3) WILD-TYPE | 32 | 47 | 91 | 59 | 49 |
P value = 0.00194 (Fisher's exact test), Q value = 0.0073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 107 | 81 | 102 | 50 |
DEL PEAK 30(19P13.3) MUTATED | 38 | 15 | 15 | 15 |
DEL PEAK 30(19P13.3) WILD-TYPE | 69 | 66 | 87 | 35 |
P value = 0.00112 (Fisher's exact test), Q value = 0.0048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 70 | 82 | 100 | 34 | 54 |
DEL PEAK 30(19P13.3) MUTATED | 26 | 21 | 17 | 13 | 6 |
DEL PEAK 30(19P13.3) WILD-TYPE | 44 | 61 | 83 | 21 | 48 |
P value = 0.00633 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 32(22Q12.1) MUTATED | 18 | 44 | 17 |
DEL PEAK 32(22Q12.1) WILD-TYPE | 75 | 107 | 109 |
P value = 0.00335 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 32(22Q12.1) MUTATED | 11 | 18 | 1 | 4 | 13 | 0 |
DEL PEAK 32(22Q12.1) WILD-TYPE | 30 | 55 | 18 | 18 | 9 | 1 |
P value = 0.00316 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 32(22Q12.1) MUTATED | 26 | 19 | 9 | 15 | 10 |
DEL PEAK 32(22Q12.1) WILD-TYPE | 41 | 67 | 62 | 56 | 59 |
P value = 0.00063 (Fisher's exact test), Q value = 0.003
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 33(22Q13.32) MUTATED | 19 | 48 | 16 |
DEL PEAK 33(22Q13.32) WILD-TYPE | 74 | 103 | 110 |
P value = 0.00407 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 41 | 73 | 19 | 22 | 22 | 1 |
DEL PEAK 33(22Q13.32) MUTATED | 15 | 20 | 2 | 3 | 13 | 0 |
DEL PEAK 33(22Q13.32) WILD-TYPE | 26 | 53 | 17 | 19 | 9 | 1 |
P value = 1e-04 (Fisher's exact test), Q value = 0.00066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 67 | 86 | 71 | 71 | 69 |
DEL PEAK 33(22Q13.32) MUTATED | 28 | 24 | 7 | 14 | 10 |
DEL PEAK 33(22Q13.32) WILD-TYPE | 39 | 62 | 64 | 57 | 59 |
P value = 0.0102 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 54 | 56 | 114 | 84 | 56 |
DEL PEAK 33(22Q13.32) MUTATED | 16 | 6 | 36 | 16 | 9 |
DEL PEAK 33(22Q13.32) WILD-TYPE | 38 | 50 | 78 | 68 | 47 |
P value = 7e-05 (Fisher's exact test), Q value = 0.00049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 151 | 126 |
DEL PEAK 34(XQ26.2) MUTATED | 6 | 42 | 19 |
DEL PEAK 34(XQ26.2) WILD-TYPE | 87 | 109 | 107 |
P value = 0.00732 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 93 | 161 | 116 |
DEL PEAK 34(XQ26.2) MUTATED | 8 | 30 | 29 |
DEL PEAK 34(XQ26.2) WILD-TYPE | 85 | 131 | 87 |
-
Copy number data file = all_lesions.txt from GISTIC pipeline
-
Processed Copy number data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/LIHC-TP/26852960/transformed.cor.cli.txt
-
Molecular subtype file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/LIHC-TP/26874095/LIHC-TP.transferedmergedcluster.txt
-
Number of patients = 370
-
Number of significantly focal cnvs = 61
-
Number of molecular subtypes = 10
-
Exclude genes that fewer than K tumors have alterations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.