Clinical Features	Time to Death		AGE		GENDER		KARNOFSKY.PERFORMANCE.SCORE		HISTOLOGICAL.TYPE		PATHOLOGY.T		PATHOLOGY.N		PATHOLOGICSPREAD(M)		TUMOR.STAGE		RADIATIONS.RADIATION.REGIMENINDICATION		NEOADJUVANT.THERAPY		NUMBERPACKYEARSSMOKED		STOPPEDSMOKINGYEAR		TOBACCOSMOKINGHISTORYINDICATOR		YEAROFTOBACCOSMOKINGONSET	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	Chi-square test_P	Chi-square test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q
Amp Peak  1(1p22.3)	65 (29%)	158	0.19444	1	0.00054709	0.546	0.88315	1	0.55333	1	0.40933	1	0.66455	1	0.47109	1	0.8055	1	0.66416	1	0.38065	1	0.10754	1	0.7327	1	0.9197	1	0.76734	1	0.92546	1
Amp Peak  2(1q21.3)	167 (75%)	56	0.76323	1	0.056051	1	0.044023	1	0.34358	1	0.075665	1	0.4101	1	0.3147	1	0.56433	1	0.94655	1	0.3668	1	0.29328	1	0.46543	1	0.35401	1	0.10353	1	0.32572	1
Amp Peak  3(3p11.1)	27 (12%)	196	0.80498	1	0.82486	1	0.21866	1	NA	NA	0.66098	1	0.027072	1	0.18918	1	1	1	0.16703	1	1	1	0.77997	1	0.035066	1	0.27092	1	0.07767	1	0.29571	1
Amp Peak  4(3q26.2)	69 (31%)	154	0.44469	1	0.092205	1	0.5602	1	0.73592	1	0.88754	1	0.41778	1	0.97788	1	0.65742	1	0.71944	1	0.40335	1	1	1	0.19952	1	0.29583	1	0.10968	1	0.22637	1
Amp Peak  5(5p15.33)	145 (65%)	78	0.42004	1	0.0065058	1	0.034097	1	0.016809	1	0.39853	1	0.054994	1	0.94014	1	1	1	0.83382	1	0.26915	1	0.70305	1	0.238	1	0.14186	1	0.35716	1	0.41189	1
Amp Peak  6(5p13.2)	132 (59%)	91	0.0507	1	0.022362	1	0.029283	1	0.48818	1	0.63769	1	0.037804	1	0.68994	1	0.45886	1	0.44427	1	0.28905	1	0.58241	1	0.15357	1	0.091073	1	0.57278	1	0.67825	1
Amp Peak  7(6p21.1)	78 (35%)	145	0.92198	1	0.29085	1	0.39715	1	0.65121	1	0.82231	1	0.08549	1	0.55812	1	0.12457	1	0.82043	1	1	1	0.44544	1	0.8344	1	0.7334	1	0.0080999	1	0.28923	1
Amp Peak  8(7p21.1)	124 (56%)	99	0.39828	1	0.068578	1	0.41533	1	0.96737	1	0.71861	1	0.46374	1	0.0097942	1	0.89911	1	0.44298	1	0.7932	1	0.19936	1	0.509	1	0.92308	1	0.11404	1	0.23261	1
Amp Peak  9(7p11.2)	117 (52%)	106	0.19025	1	0.047077	1	0.58915	1	0.67085	1	0.64367	1	0.30093	1	0.0019157	1	0.62692	1	0.22724	1	0.7903	1	0.71882	1	0.48591	1	0.97867	1	0.25915	1	0.041991	1
Amp Peak 10(7q31.2)	88 (39%)	135	0.66054	1	0.029842	1	0.68027	1	0.70551	1	0.29616	1	0.4835	1	0.085982	1	0.29827	1	0.32137	1	0.5916	1	0.8527	1	0.61413	1	0.75044	1	0.45535	1	0.78483	1
Amp Peak 11(8p11.21)	63 (28%)	160	0.61024	1	0.10814	1	0.5496	1	NA	NA	0.43677	1	0.40662	1	0.26147	1	0.62077	1	0.2527	1	0.3723	1	0.69145	1	0.68938	1	0.15794	1	0.17483	1	0.99532	1
Amp Peak 12(8p11.21)	68 (30%)	155	0.27647	1	0.013514	1	0.56016	1	NA	NA	0.43501	1	0.73391	1	0.2651	1	1	1	0.48675	1	0.39813	1	0.32304	1	0.61002	1	0.45897	1	0.023581	1	0.67261	1
Amp Peak 13(8q11.1)	95 (43%)	128	0.54364	1	0.015641	1	0.8918	1	0.62958	1	0.24749	1	0.39022	1	0.28599	1	0.80237	1	0.43072	1	0.42575	1	0.026353	1	0.80335	1	0.32647	1	0.0024763	1	0.12917	1
Amp Peak 14(8q24.21)	146 (65%)	77	0.14831	1	0.039619	1	0.57209	1	0.99471	1	0.036506	1	0.38381	1	0.51267	1	0.88969	1	0.68111	1	0.093501	1	0.5693	1	0.60959	1	0.11677	1	0.042464	1	0.82485	1
Amp Peak 15(11q13.3)	74 (33%)	149	0.49671	1	0.00020403	0.204	0.56675	1	0.41268	1	0.47369	1	0.95471	1	0.72189	1	0.78286	1	0.48811	1	0.77812	1	1	1	0.84296	1	0.13932	1	0.0084541	1	0.82614	1
Amp Peak 16(12p12.1)	74 (33%)	149	0.0082416	1	0.7048	1	0.39008	1	0.56002	1	0.7788	1	0.28523	1	0.42074	1	0.20952	1	0.84318	1	0.77812	1	1	1	0.70013	1	0.57759	1	0.57614	1	0.24728	1
Amp Peak 17(12q14.1)	67 (30%)	156	0.011926	1	0.52532	1	0.46549	1	0.29219	1	0.82794	1	0.12262	1	0.1617	1	0.95933	1	0.24329	1	1	1	0.84403	1	0.55302	1	0.010165	1	0.15541	1	0.0043114	1
Amp Peak 18(12q15)	68 (30%)	155	0.18808	1	0.70472	1	0.77085	1	0.1986	1	0.81127	1	0.147	1	0.20862	1	1	1	0.48019	1	0.77787	1	0.69559	1	0.13064	1	0.14902	1	0.020327	1	0.0057382	1
Amp Peak 19(14q13.3)	96 (43%)	127	0.58924	1	0.59654	1	0.27748	1	0.6892	1	0.37644	1	0.18974	1	0.98082	1	0.42994	1	0.72964	1	1	1	0.58701	1	0.98983	1	0.3551	1	0.72416	1	0.070087	1
Amp Peak 20(17q12)	99 (44%)	124	0.97077	1	0.43884	1	1	1	0.18705	1	0.46815	1	0.702	1	0.76415	1	0.076621	1	0.5258	1	0.10483	1	0.14803	1	0.30341	1	0.20763	1	0.33474	1	0.97881	1
Amp Peak 21(17q25.3)	110 (49%)	113	0.40995	1	0.043245	1	0.41867	1	0.61866	1	0.62726	1	0.75272	1	0.65785	1	0.024505	1	0.91347	1	0.79453	1	0.27673	1	0.69155	1	0.13493	1	0.33441	1	0.2098	1
Amp Peak 22(18q11.2)	48 (22%)	175	0.22366	1	0.68806	1	0.25053	1	0.81769	1	0.28838	1	1	1	0.61008	1	0.95201	1	0.94078	1	0.534	1	1	1	0.69962	1	0.61544	1	0.43397	1	0.42432	1
Amp Peak 23(19q13.11)	58 (26%)	165	0.49119	1	0.90892	1	0.1706	1	NA	NA	0.5513	1	0.87524	1	0.44581	1	0.79709	1	0.679	1	1	1	0.21379	1	0.32377	1	0.11847	1	0.43109	1	0.24555	1
Amp Peak 24(20p11.21)	82 (37%)	141	0.52758	1	0.55126	1	0.40546	1	0.11146	1	0.47794	1	0.23534	1	0.056501	1	0.76307	1	0.1332	1	1	1	0.058922	1	0.98299	1	0.98605	1	0.15325	1	0.36337	1
Amp Peak 25(20q13.2)	96 (43%)	127	0.95954	1	0.44315	1	0.6832	1	0.011635	1	0.19817	1	0.29401	1	0.29777	1	0.21816	1	0.079669	1	0.5911	1	0.26998	1	0.54666	1	0.25127	1	0.067015	1	0.90429	1
Amp Peak 26(20q13.33)	104 (47%)	119	0.5223	1	0.64969	1	0.68605	1	0.071813	1	0.50366	1	0.1843	1	0.22821	1	0.016749	1	0.0039549	1	0.42252	1	0.20265	1	0.75504	1	0.32086	1	0.46116	1	0.6648	1
Amp Peak 27(Xq28)	68 (30%)	155	0.40104	1	0.069635	1	0.14496	1	0.089852	1	0.46787	1	0.24217	1	0.23319	1	0.84306	1	0.2639	1	0.77787	1	0.24077	1	0.013385	1	0.51711	1	0.018373	1	0.78004	1
Del Peak  1(1p36.13)	54 (24%)	169	0.056806	1	0.96304	1	0.027387	1	0.55314	1	0.90194	1	0.06284	1	0.07018	1	0.95305	1	0.29159	1	0.76219	1	0.29382	1	0.57436	1	0.8742	1	0.80058	1	0.95873	1
Del Peak  2(1p12)	65 (29%)	158	0.75801	1	0.12729	1	0.65921	1	0.56082	1	0.16639	1	0.86174	1	1	1	0.62276	1	0.6251	1	1	1	0.84296	1	0.041157	1	0.36331	1	0.84202	1	0.24555	1
Del Peak  3(2q22.1)	21 (9%)	202	0.45072	1	0.51872	1	1	1	NA	NA	0.038454	1	0.26785	1	0.50195	1	0.4641	1	0.47401	1	0.63895	1	0.75475	1	0.73688	1	0.095162	1	0.12823	1	0.91846	1
Del Peak  4(2q37.3)	35 (16%)	188	0.84861	1	0.82183	1	0.26629	1	0.52536	1	0.16923	1	0.89887	1	0.33737	1	0.33017	1	0.5945	1	0.4761	1	0.61631	1	0.94985	1	0.43845	1	0.29254	1	0.5448	1
Del Peak  5(3q11.1)	68 (30%)	155	0.51441	1	0.61142	1	1	1	0.06092	1	0.66084	1	0.91484	1	0.80188	1	0.84645	1	0.80367	1	1	1	0.84375	1	0.067541	1	0.50186	1	0.68281	1	0.027132	1
Del Peak  6(3q28)	67 (30%)	156	0.43472	1	0.05195	1	0.30679	1	0.20969	1	0.87579	1	0.88371	1	0.31428	1	0.29509	1	0.15815	1	0.56155	1	0.42864	1	0.76004	1	0.86933	1	0.87737	1	0.36128	1
Del Peak  7(4p15.31)	45 (20%)	178	0.62901	1	0.09004	1	0.40251	1	0.61163	1	0.26633	1	0.81718	1	0.7838	1	0.94921	1	0.6193	1	0.19167	1	0.65595	1	0.18969	1	0.0027725	1	0.098877	1	0.14032	1
Del Peak  8(4q35.2)	76 (34%)	147	0.24057	1	0.60274	1	0.32202	1	0.17411	1	0.43768	1	0.27177	1	0.47434	1	0.13329	1	0.48265	1	0.3974	1	0.25176	1	0.41362	1	0.16677	1	0.27607	1	0.44067	1
Del Peak  9(5q11.1)	58 (26%)	165	0.62712	1	0.070465	1	0.75861	1	0.22896	1	0.25583	1	0.61283	1	0.4959	1	1	1	0.48249	1	0.36438	1	0.83632	1	0.14681	1	0.0042722	1	0.13226	1	0.90212	1
Del Peak 10(5q11.2)	76 (34%)	147	0.74238	1	0.035799	1	1	1	0.3381	1	0.6725	1	0.71922	1	0.10562	1	0.67274	1	0.42735	1	0.77865	1	0.56574	1	0.18324	1	0.0033225	1	0.14653	1	0.27163	1
Del Peak 11(5q31.1)	89 (40%)	134	0.51034	1	0.0021755	1	0.67964	1	0.3381	1	0.39995	1	0.63994	1	0.062263	1	0.86216	1	0.061511	1	0.41396	1	1	1	0.084334	1	0.0056735	1	0.0029728	1	0.12216	1
Del Peak 12(6q11.1)	62 (28%)	161	0.061868	1	0.49119	1	0.22971	1	0.26452	1	0.45652	1	0.93119	1	0.096988	1	0.1366	1	0.018874	1	0.56717	1	1	1	0.091075	1	0.52661	1	0.0371	1	0.11581	1
Del Peak 13(6q22.31)	117 (52%)	106	0.95515	1	0.47845	1	0.89327	1	0.13747	1	0.69703	1	0.6962	1	0.81106	1	0.89794	1	0.41257	1	1	1	0.85573	1	0.72972	1	0.028575	1	0.13755	1	0.35737	1
Del Peak 14(6q26)	116 (52%)	107	0.96273	1	0.42538	1	0.18039	1	0.18738	1	0.39398	1	0.85446	1	0.54347	1	0.83677	1	0.4276	1	1	1	0.36479	1	0.35059	1	0.14098	1	0.23853	1	0.44094	1
Del Peak 15(8p23.2)	104 (47%)	119	0.24073	1	0.49297	1	0.079463	1	0.027709	1	0.070358	1	0.40334	1	0.63167	1	0.72352	1	0.85145	1	0.60459	1	0.36353	1	0.39844	1	0.69063	1	0.22132	1	0.45007	1
Del Peak 16(8p21.3)	112 (50%)	111	0.055749	1	0.9479	1	0.031106	1	0.033002	1	0.050309	1	0.58042	1	0.2945	1	0.2625	1	0.76726	1	0.59439	1	0.85588	1	0.020943	1	0.18406	1	0.79628	1	0.66314	1
Del Peak 17(8p11.21)	46 (21%)	177	0.83719	1	0.76625	1	0.019372	1	0.10359	1	0.81425	1	0.26698	1	0.63903	1	0.80186	1	0.70223	1	0.090172	1	0.26353	1	0.63247	1	0.98309	1	0.79838	1	0.5053	1
Del Peak 18(9p23)	128 (57%)	95	0.09457	1	0.097815	1	0.8918	1	0.78612	1	0.41849	1	0.81225	1	0.011421	1	0.10772	1	0.11466	1	1	1	0.58345	1	0.87692	1	0.041976	1	0.077298	1	0.037369	1
Del Peak 19(9p21.3)	134 (60%)	89	0.22939	1	0.059588	1	0.17065	1	0.67052	1	0.82462	1	0.90616	1	0.0058307	1	0.16496	1	0.060469	1	1	1	0.85369	1	0.84216	1	0.0081379	1	0.16736	1	0.10949	1
Del Peak 20(9q21.11)	112 (50%)	111	0.18108	1	0.4874	1	0.78795	1	0.96741	1	0.10696	1	0.49135	1	0.18661	1	0.92997	1	0.14783	1	0.4374	1	0.070964	1	0.20032	1	0.94472	1	0.7687	1	0.89681	1
Del Peak 21(10p15.3)	54 (24%)	169	0.15604	1	0.69428	1	0.0008553	0.853	0.63824	1	0.16031	1	0.13748	1	0.79133	1	0.70149	1	0.97785	1	0.5319	1	0.83488	1	0.32106	1	0.90119	1	0.0065029	1	0.29484	1
Del Peak 22(10q26.3)	62 (28%)	161	0.82656	1	0.92866	1	0.071095	1	0.071813	1	0.8267	1	0.21489	1	0.26276	1	0.70566	1	0.066651	1	0.073444	1	0.54285	1	0.0594	1	0.55664	1	0.15746	1	0.043591	1
Del Peak 23(11q25)	50 (22%)	173	0.21803	1	0.95543	1	0.749	1	0.72178	1	0.74812	1	0.75929	1	0.72238	1	0.48275	1	0.85591	1	0.5302	1	0.27394	1	0.80992	1	0.92457	1	0.29175	1	0.12556	1
Del Peak 24(12p12.3)	60 (27%)	163	0.56962	1	0.55659	1	0.067623	1	0.94023	1	0.50912	1	0.45382	1	0.080665	1	0.25019	1	0.31835	1	0.12646	1	1	1	0.010402	1	0.47164	1	0.1719	1	0.31473	1
Del Peak 25(12q24.33)	62 (28%)	161	0.78988	1	0.81736	1	0.54856	1	0.8486	1	0.013985	1	0.16773	1	0.97673	1	0.30534	1	0.87968	1	0.24545	1	1	1	0.28205	1	0.87931	1	0.14864	1	0.69417	1
Del Peak 26(13q12.11)	115 (52%)	108	0.76032	1	0.097725	1	0.41807	1	0.024623	1	0.13487	1	0.39886	1	0.8921	1	0.21432	1	0.47588	1	0.42748	1	1	1	0.06315	1	0.13939	1	0.24637	1	0.10081	1
Del Peak 27(14q32.33)	64 (29%)	159	0.25002	1	0.97963	1	0.65493	1	0.88977	1	0.35646	1	0.57428	1	0.10992	1	0.8381	1	0.25699	1	0.76848	1	0.16032	1	0.59513	1	0.89466	1	0.43529	1	0.33288	1
Del Peak 28(15q11.2)	122 (55%)	101	0.60903	1	0.17497	1	0.079478	1	0.12489	1	0.028312	1	0.57414	1	0.84206	1	0.60529	1	0.95185	1	0.79103	1	0.46643	1	0.5818	1	0.33301	1	0.11572	1	0.17466	1
Del Peak 29(15q15.2)	122 (55%)	101	0.94133	1	0.28512	1	0.079478	1	0.12489	1	0.0076896	1	0.63063	1	0.75061	1	0.89962	1	1	1	0.42517	1	0.71596	1	0.64882	1	0.71506	1	0.21229	1	0.34228	1
Del Peak 30(16q23.1)	73 (33%)	150	0.76787	1	0.6098	1	0.47245	1	0.48384	1	0.72318	1	0.84712	1	0.67657	1	0.85219	1	0.75603	1	0.5739	1	0.56393	1	0.49442	1	0.29906	1	0.14725	1	0.75112	1
Del Peak 31(17p13.3)	129 (58%)	94	0.12848	1	0.045666	1	0.076512	1	0.58548	1	0.14372	1	0.74315	1	0.98067	1	0.53466	1	0.95935	1	0.42227	1	0.14271	1	0.38503	1	0.34376	1	0.30834	1	0.010533	1
Del Peak 32(17p11.2)	107 (48%)	116	0.086938	1	0.0071512	1	0.18039	1	0.2537	1	0.34893	1	0.1398	1	0.49453	1	0.32784	1	0.87748	1	0.11057	1	0.36479	1	0.85666	1	0.5062	1	0.65014	1	0.066461	1
Del Peak 33(18q21.1)	113 (51%)	110	0.35817	1	0.20574	1	0.22646	1	0.50604	1	0.1388	1	0.23393	1	0.75246	1	0.31835	1	0.55146	1	1	1	1	1	0.76557	1	0.77575	1	0.46064	1	0.28146	1
Del Peak 34(18q21.32)	115 (52%)	108	0.15064	1	0.16776	1	0.14044	1	0.50604	1	0.2527	1	0.22426	1	0.59823	1	0.65225	1	0.79126	1	0.59728	1	1	1	0.74221	1	0.78283	1	0.29271	1	0.32491	1
Del Peak 35(19p13.3)	117 (52%)	106	0.25058	1	0.67822	1	0.00026884	0.269	0.58548	1	0.38994	1	0.11807	1	0.38497	1	0.16477	1	0.21654	1	0.60158	1	0.10033	1	0.79503	1	0.84442	1	0.20582	1	0.56192	1
Del Peak 36(19q13.33)	80 (36%)	143	0.25452	1	0.24569	1	0.1219	1	0.64122	1	0.55972	1	0.28918	1	0.46813	1	0.16985	1	0.26579	1	0.40895	1	0.13218	1	0.76861	1	0.54492	1	0.50421	1	0.38452	1
Del Peak 37(21q11.2)	75 (34%)	148	0.87333	1	0.43484	1	0.15652	1	0.2685	1	0.55016	1	0.48068	1	0.77583	1	0.92519	1	0.26574	1	0.58229	1	0.055083	1	0.0034101	1	0.091476	1	0.16848	1	0.68291	1
Del Peak 38(21q21.3)	72 (32%)	151	0.92766	1	0.65345	1	0.043188	1	0.7098	1	0.80252	1	0.36755	1	0.67657	1	0.88818	1	0.3882	1	0.57046	1	0.081607	1	0.0073196	1	0.049664	1	0.029121	1	0.85913	1
Del Peak 39(22q13.32)	107 (48%)	116	0.35805	1	0.39135	1	0.34458	1	0.26776	1	0.70374	1	0.79821	1	0.3577	1	0.86754	1	0.23991	1	1	1	0.71706	1	0.97424	1	0.88031	1	0.078854	1	0.20886	1
Del Peak 40(Xp22.2)	58 (26%)	165	0.30249	1	0.22403	1	0.093846	1	0.41899	1	0.56671	1	0.76376	1	0.60141	1	0.86678	1	0.47621	1	0.76457	1	0.53532	1	0.54887	1	0.54869	1	0.66248	1	0.5144	1