rank geneset description genes N_genes mut_tally N n npat nsite nsil n1 n2 n3 n4 n5 n6 p_ns_s p q 1 TERTPATHWAY hTERC, the RNA subunit of telomerase, and hTERT, the catalytic protein subunit, are required for telomerase activity and are overexpressed in many cancers. HDAC1, MAX, MYC, SP1, SP3, TP53, WT1, ZNF42 7 HDAC1(1), MAX(1), SP3(1), TP53(65), WT1(7) 1367658 75 60 65 8 5 18 17 10 25 0 0.00478 <1.00e-15 <4.10e-13 2 RNAPATHWAY dsRNA-activated protein kinase phosphorylates elF2a, which generally inhibits translation, and activates NF-kB to provoke inflammation. CHUK, DNAJC3, EIF2S1, EIF2S2, MAP3K14, NFKB1, NFKBIA, PRKR, RELA, TP53 9 CHUK(1), DNAJC3(2), MAP3K14(1), NFKB1(2), TP53(65) 1900041 71 59 61 7 5 13 19 10 24 0 0.00431 1.33e-15 4.10e-13 3 PLK3PATHWAY Active Plk3 phosphorylates CDC25c, blocking the G2/M transition, and phosphorylates p53 to induce apoptosis. ATM, ATR, CDC25C, CHEK1, CHEK2, CNK, TP53, YWHAH 7 ATM(14), ATR(9), CHEK1(6), CHEK2(2), TP53(65) 3108126 96 68 85 7 5 21 24 15 31 0 0.00113 2.55e-15 5.24e-13 4 SA_G1_AND_S_PHASES Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition. ARF1, ARF3, CCND1, CDK2, CDK4, CDKN1A, CDKN1B, CDKN2A, CFL1, E2F1, E2F2, MDM2, NXT1, PRB1, TP53 15 ARF3(1), CCND1(2), CDK2(4), CDK4(2), CDKN1B(2), CDKN2A(7), MDM2(1), PRB1(3), TP53(65) 1666809 87 62 77 7 11 17 18 13 28 0 0.000113 4.22e-15 6.50e-13 5 TIDPATHWAY On ligand binding, interferon gamma receptors stimulate JAK2 kinase to phosphorylate STAT transcription factors, which promote expression of interferon responsive genes. DNAJA3, HSPA1A, IFNG, IFNGR1, IFNGR2, IKBKB, JAK2, LIN7A, NFKB1, NFKBIA, RB1, RELA, TIP-1, TNF, TNFRSF1A, TNFRSF1B, TP53, USH1C, WT1 18 IFNG(3), IFNGR1(3), IFNGR2(2), IKBKB(2), JAK2(2), LIN7A(1), NFKB1(2), RB1(5), TNFRSF1B(1), TP53(65), USH1C(3), WT1(7) 3567108 96 68 86 9 9 22 23 12 30 0 0.000225 8.88e-15 1.09e-12 6 PMLPATHWAY Ring-shaped PML nuclear bodies regulate transcription and are required co-activators in p53- and DAXX-mediated apoptosis. CREBBP, DAXX, HRAS, PAX3, PML, PRAM-1, RARA, RB1, SIRT1, SP100, TNF, TNFRSF1A, TNFRSF1B, TNFRSF6, TNFSF6, TP53, UBL1 13 CREBBP(2), DAXX(2), HRAS(1), PAX3(3), PML(4), RARA(2), RB1(5), SIRT1(1), SP100(4), TNFRSF1B(1), TP53(65) 3730422 90 64 80 7 7 17 23 14 29 0 9.09e-05 4.23e-14 4.34e-12 7 P53PATHWAY p53 induces cell cycle arrest or apoptosis under conditions of DNA damage. APAF1, ATM, BAX, BCL2, CCND1, CCNE1, CDK2, CDK4, CDKN1A, E2F1, GADD45A, MDM2, PCNA, RB1, TIMP3, TP53 16 APAF1(4), ATM(14), BAX(1), BCL2(1), CCND1(2), CCNE1(3), CDK2(4), CDK4(2), GADD45A(1), MDM2(1), RB1(5), TP53(65) 3530085 103 73 92 12 11 22 22 16 32 0 0.00320 1.11e-12 9.79e-11 8 RBPATHWAY The ATM protein kinase recognizes DNA damage and blocks cell cycle progression by phosphorylating chk1 and p53, which normally inhibits Rb to allow G1/S transitions. ATM, CDC2, CDC25A, CDC25B, CDC25C, CDK2, CDK4, CHEK1, MYT1, RB1, TP53, WEE1, YWHAH 12 ATM(14), CDC25A(2), CDC25B(1), CDK2(4), CDK4(2), CHEK1(6), MYT1(5), RB1(5), TP53(65), WEE1(1) 3419532 105 72 94 12 9 24 22 16 34 0 0.00416 1.73e-11 1.33e-09 9 ARFPATHWAY Cyclin-dependent kinase inhibitor 2A is a tumor suppressor that induces G1 arrest and can activate the p53 pathway, leading to G2/M arrest. ABL1, CDKN2A, E2F1, MDM2, MYC, PIK3CA, PIK3R1, POLR1A, POLR1B, POLR1C, POLR1D, RAC1, RB1, TBX2, TP53, TWIST1 16 ABL1(1), CDKN2A(7), MDM2(1), PIK3CA(5), PIK3R1(1), POLR1A(5), POLR1B(8), POLR1D(1), RB1(5), TP53(65), TWIST1(1) 3965073 100 66 88 11 11 18 24 16 31 0 0.000784 2.33e-08 1.60e-06 10 P53HYPOXIAPATHWAY Hypoxia induces p53 accumulation and consequent apoptosis with p53-mediated cell cycle arrest, which is present under conditions of DNA damage. ABCB1, AKT1, ATM, BAX, CDKN1A, CPB2, CSNK1A1, CSNK1D, FHL2, GADD45A, HIC1, HIF1A, HSPA1A, HSPCA, IGFBP3, MAPK8, MDM2, NFKBIB, NQO1, TP53 19 ABCB1(10), ATM(14), BAX(1), CSNK1A1(1), CSNK1D(1), GADD45A(1), HIF1A(1), IGFBP3(2), MAPK8(3), MDM2(1), NQO1(3), TP53(65) 4040280 103 69 92 13 11 24 22 13 33 0 0.00721 1.62e-06 0.000100 11 ATMPATHWAY The tumor-suppressing protein kinase ATM responds to radiation-induced DNA damage by blocking cell-cycle progression and activating DNA repair. ABL1, ATM, BRCA1, CDKN1A, CHEK1, CHEK2, GADD45A, JUN, MAPK8, MDM2, MRE11A, NBS1, NFKB1, NFKBIA, RAD50, RAD51, RBBP8, RELA, TP53, TP73 19 ABL1(1), ATM(14), BRCA1(6), CHEK1(6), CHEK2(2), GADD45A(1), MAPK8(3), MDM2(1), NFKB1(2), RAD50(1), RBBP8(2), TP53(65), TP73(3) 5789907 107 71 96 13 10 25 27 15 30 0 0.00581 4.26e-05 0.00239 12 G1PATHWAY CDK4/6-cyclin D and CDK2-cyclin E phosphorylate Rb, which allows the transcription of genes needed for the G1/S cell cycle transition. ABL1, ATM, ATR, CCNA1, CCND1, CCNE1, CDC2, CDC25A, CDK2, CDK4, CDK6, CDKN1A, CDKN1B, CDKN2A, CDKN2B, DHFR, E2F1, GSK3B, HDAC1, MADH3, MADH4, RB1, SKP2, TFDP1, TGFB1, TGFB2, TGFB3, TP53 25 ABL1(1), ATM(14), ATR(9), CCNA1(2), CCND1(2), CCNE1(3), CDC25A(2), CDK2(4), CDK4(2), CDKN1B(2), CDKN2A(7), GSK3B(1), HDAC1(1), RB1(5), SKP2(3), TFDP1(2), TGFB1(2), TGFB2(5), TGFB3(1), TP53(65) 5897493 133 76 122 21 12 30 29 22 40 0 0.0186 0.00238 0.122 13 P27PATHWAY p27 blocks the G1/S transition by inhibiting the checkpoint kinase cdk2/cyclin E and is inhibited by cdk2-mediated ubiquitination. CCNE1, CDK2, CDKN1B, CKS1B, CUL1, E2F1, NEDD8, RB1, RBX1, SKP1A, SKP2, TFDP1, UBE2M 12 CCNE1(3), CDK2(4), CDKN1B(2), CUL1(3), NEDD8(2), RB1(5), SKP2(3), TFDP1(2), UBE2M(1) 1678032 25 19 25 3 5 4 8 4 4 0 0.0845 0.0175 0.827 14 ARENRF2PATHWAY Nrf1 and nrf2 are transcription factors that bind to antioxidant response elements (AREs), promoters of genes involved in oxidative damage control. CREB1, FOS, FXYD2, JUN, KEAP1, MAFF, MAFG, MAFK, MAPK1, MAPK14, MAPK8, NFE2L2, PRKCA, PRKCB1 13 FXYD2(1), KEAP1(24), MAPK14(1), MAPK8(3), NFE2L2(1), PRKCA(7) 1736727 37 32 36 7 7 6 13 6 5 0 0.134 0.0214 0.942 15 SKP2E2FPATHWAY E2F-1, a transcription factor that promotes the G1/S transition, is repressed by Rb and activated by cdk2/cyclin E. CCNA1, CCNE1, CDC34, CDK2, CUL1, E2F1, RB1, SKP1A, SKP2, TFDP1 9 CCNA1(2), CCNE1(3), CDC34(1), CDK2(4), CUL1(3), RB1(5), SKP2(3), TFDP1(2) 1675581 23 18 23 2 6 5 6 3 3 0 0.0565 0.0482 1.000 16 ST_INTERFERON_GAMMA_PATHWAY The interferon gamma pathway resembles the JAK-STAT pathway and activates STAT transcription factors. CISH, IFNG, IFNGR1, JAK1, JAK2, PLA2G2A, PTPRU, REG1A, STAT1, STATIP1 9 IFNG(3), IFNGR1(3), JAK1(5), JAK2(2), PLA2G2A(3), PTPRU(6), REG1A(5), STAT1(2) 2243697 29 22 29 3 5 6 6 5 7 0 0.0428 0.105 1.000 17 IL18PATHWAY Pro-inflammatory IL-18 is activated in macrophages by caspase-1 cleavage and, in conjunction with IL-12, stimulates Th1 cell differentiation. CASP1, IFNG, IL12A, IL12B, IL18, IL2 6 CASP1(2), IFNG(3), IL12A(2), IL2(3) 581919 10 8 10 1 2 5 2 0 1 0 0.265 0.136 1.000 18 IFNGPATHWAY IFN gamma signaling pathway IFNG, IFNGR1, IFNGR2, JAK1, JAK2, STAT1 6 IFNG(3), IFNGR1(3), IFNGR2(2), JAK1(5), JAK2(2), STAT1(2) 1595988 17 14 17 2 3 1 6 3 4 0 0.122 0.166 1.000 19 FBW7PATHWAY Cyclin E interacts with cell cycle checkpoint kinase cdk2 to allow transcription of genes required for S phase, including transcription of additional cyclin E. CCNE1, CDC34, CDK2, CUL1, E2F1, FBXW7, RB1, SKP1A, TFDP1 8 CCNE1(3), CDC34(1), CDK2(4), CUL1(3), FBXW7(2), RB1(5), TFDP1(2) 1630818 20 15 20 2 5 4 5 3 3 0 0.108 0.171 1.000 20 RECKPATHWAY RECK is a membrane-anchored inhibitor of matrix metalloproteinases, which are expressed by tumor cells and promote metastasis. HRAS, MMP14, MMP2, MMP9, RECK, TIMP1, TIMP2, TIMP3, TIMP4 9 HRAS(1), MMP14(2), MMP2(6), MMP9(8), RECK(5), TIMP4(1) 1454862 23 16 23 4 3 4 7 4 5 0 0.239 0.213 1.000 21 NUCLEOTIDE_SUGARS_METABOLISM GALE, GALT, TGDS, UGDH, UXS1 5 GALT(1), TGDS(2), UGDH(3), UXS1(4) 755037 10 9 10 2 1 2 4 0 3 0 0.556 0.224 1.000 22 SLRPPATHWAY Small leucine-rich proteoglycans (SLRPs) interact with and reorganize collagen fibers in the extracellular matrix. BGN, DCN, DSPG3, FMOD, KERA, LUM 5 BGN(4), DCN(1), FMOD(2), KERA(3), LUM(3) 700083 13 11 13 3 2 4 3 3 1 0 0.462 0.227 1.000 23 CHEMICALPATHWAY DNA damage promotes Bid cleavage, which stimulates mitochondrial cytochrome c release and consequent caspase activation, resulting in apoptosis. ADPRT, AKT1, APAF1, ATM, BAD, BAX, BCL2, BCL2L1, BID, CASP3, CASP6, CASP7, CASP9, CYCS, EIF2S1, PRKCA, PRKCB1, PTK2, PXN, STAT1, TLN1, TP53 20 APAF1(4), ATM(14), BAX(1), BCL2(1), BID(1), CASP3(4), CASP9(2), PRKCA(7), PTK2(7), STAT1(2), TLN1(9), TP53(65) 5324991 117 78 106 22 12 28 25 17 35 0 0.0648 0.237 1.000 24 HSA00902_MONOTERPENOID_BIOSYNTHESIS Genes involved in monoterpenoid biosynthesis CYP2C19, CYP2C9 2 CYP2C19(5), CYP2C9(2) 389193 7 6 7 2 2 2 0 1 2 0 0.685 0.238 1.000 25 HSA00730_THIAMINE_METABOLISM Genes involved in thiamine metabolism LHPP, MTMR1, MTMR2, MTMR6, NFS1, PHPT1, THTPA, TPK1 8 MTMR1(2), MTMR2(1), MTMR6(3), NFS1(3), TPK1(4) 1249623 13 11 13 2 0 5 3 3 1 1 0.410 0.292 1.000 26 TOB1PATHWAY TGF-beta signaling activates SMADs, which interact with intracellular Tob to maintain unstimulated T cells by repressing IL-2 expression. CD28, CD3D, CD3E, CD3G, CD3Z, IFNG, IL2, IL2RA, IL4, MADH3, MADH4, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, TGFBR3, TOB1, TOB2, TRA@, TRB@ 16 CD28(1), CD3D(1), IFNG(3), IL2(3), IL2RA(3), TGFB1(2), TGFB2(5), TGFB3(1), TGFBR1(2), TGFBR3(11), TOB1(1), TOB2(1) 2055099 34 23 33 7 4 14 5 4 7 0 0.326 0.301 1.000 27 ST_TYPE_I_INTERFERON_PATHWAY Type I interferon is an antiviral cytokine that induces a JAK-STAT type pathway leading to ISGF3 activation and a cellular antiviral response. IFNAR1, IFNB1, ISGF3G, JAK1, PTPRU, REG1A, STAT1, STAT2, TYK2 8 IFNB1(3), JAK1(5), PTPRU(6), REG1A(5), STAT1(2), STAT2(2), TYK2(2) 2432811 25 20 25 2 4 7 4 5 5 0 0.0408 0.324 1.000 28 HSA00130_UBIQUINONE_BIOSYNTHESIS Genes involved in ubiquinone biosynthesis COQ2, COQ3, COQ5, COQ6, COQ7, ND1, ND2, ND3, ND4, ND4L, ND5, ND6, NDUFA12, NDUFA13, NDUFB11 8 COQ3(3), COQ5(3), COQ6(2), NDUFA12(2), NDUFA13(2), NDUFB11(1) 777612 13 7 13 1 5 4 3 0 1 0 0.103 0.328 1.000 29 ST_G_ALPHA_S_PATHWAY The G-alpha-s protein activates adenylyl cyclases, which catalyze cAMP formation. ASAH1, BF, BFAR, BRAF, CAMP, CREB1, CREB3, CREB5, EPAC, GAS, GRF2, MAPK1, RAF1, SNX13, SRC, TERF2IP 12 ASAH1(2), BRAF(13), CREB5(4), RAF1(2), SNX13(3), SRC(2) 2218929 26 19 22 4 7 7 3 6 3 0 0.127 0.335 1.000 30 EEA1PATHWAY The FYVE-finger proteins EEA1 and HRS are localized to endosome membranes and regulate sorting and ubiquitination in the vesicle transport system. EEA1, EGF, EGFR, HGS, RAB5A, TF, TFRC 7 EEA1(2), EGF(7), EGFR(24), RAB5A(1), TF(2), TFRC(5) 2487636 41 25 31 8 4 10 9 10 8 0 0.336 0.343 1.000 31 APOPTOSIS_GENMAPP APAF1, BAK1, BCL2L7P1, BAX, BCL2, BCL2L1, BID, BIRC2, BIRC3, BIRC4, CASP2, CASP3, CASP6, CASP7, CASP8, CASP9, CYCS, FADD, FAS, FASLG, GZMB, IKBKG, JUN, MAP2K4, MAP3K1, MAP3K14, MAPK10, MCL1, MDM2, MYC, NFKB1, NFKBIA, PARP1, PRF1, RELA, RIPK1, TNF, TNFRSF1A, TNFRSF1B, TNFSF10, TP53, TRADD, TRAF1, TRAF2 41 APAF1(4), BAX(1), BCL2(1), BID(1), BIRC2(2), BIRC3(2), CASP2(2), CASP3(4), CASP8(3), CASP9(2), FAS(2), FASLG(2), GZMB(3), MAP2K4(2), MAP3K1(3), MAP3K14(1), MAPK10(1), MCL1(1), MDM2(1), NFKB1(2), PARP1(2), PRF1(4), RIPK1(3), TNFRSF1B(1), TNFSF10(1), TP53(65) 7267344 116 73 106 20 10 30 27 19 30 0 0.0250 0.345 1.000 32 INFLAMPATHWAY Interleukins and TNF serve as signals to coordinate the inflammatory response, in which macrophages recruit and activate neutrophils, fibroblasts, and T cells. CD4, CSF1, CSF2, CSF3, HLA-DRA, HLA-DRB1, IFNA1, IFNB1, IFNG, IL10, IL11, IL12A, IL12B, IL13, IL15, IL1A, IL2, IL3, IL4, IL5, IL6, IL7, IL8, LTA, PDGFA, TGFB1, TGFB2, TGFB3, TNF 28 CD4(1), CSF1(1), HLA-DRA(2), IFNB1(3), IFNG(3), IL12A(2), IL15(1), IL1A(2), IL2(3), IL3(1), PDGFA(6), TGFB1(2), TGFB2(5), TGFB3(1) 2560521 33 23 33 5 3 9 8 8 5 0 0.100 0.353 1.000 33 ATRBRCAPATHWAY BRCA1 and 2 block cell cycle progression in response to DNA damage and promote double-stranded break repair; mutations induce breast cancer susceptibility. ATM, ATR, BRCA1, BRCA2, CHEK1, CHEK2, FANCA, FANCC, FANCD2, FANCE, FANCF, FANCG, HUS1, MRE11A, NBS1, RAD1, RAD17, RAD50, RAD51, RAD9A, TP53, TREX1 21 ATM(14), ATR(9), BRCA1(6), BRCA2(9), CHEK1(6), CHEK2(2), FANCA(4), FANCD2(8), FANCE(2), FANCF(1), FANCG(1), RAD1(3), RAD17(2), RAD50(1), RAD9A(1), TP53(65), TREX1(1) 8555667 135 75 120 21 9 35 32 17 42 0 0.0738 0.360 1.000 34 G2PATHWAY Activated Cdc2-cyclin B kinase regulates the G2/M transition; DNA damage stimulates the DNA-PK/ATM/ATR kinases, which inactivate Cdc2. ATM, ATR, BRCA1, CCNB1, CDC2, CDC25A, CDC25B, CDC25C, CDC34, CDKN1A, CDKN2D, CHEK1, CHEK2, EP300, GADD45A, MDM2, MYT1, PLK, PRKDC, RPS6KA1, TP53, WEE1, YWHAH, YWHAQ 22 ATM(14), ATR(9), BRCA1(6), CCNB1(1), CDC25A(2), CDC25B(1), CDC34(1), CDKN2D(1), CHEK1(6), CHEK2(2), EP300(1), GADD45A(1), MDM2(1), MYT1(5), PRKDC(14), TP53(65), WEE1(1) 8239875 131 77 120 20 10 32 34 18 37 0 0.0298 0.365 1.000 35 HSA00520_NUCLEOTIDE_SUGARS_METABOLISM Genes involved in nucleotide sugars metabolism GALE, GALT, TGDS, UGDH, UGP2, UXS1 6 GALT(1), TGDS(2), UGDH(3), UGP2(1), UXS1(4) 957180 11 9 11 2 2 2 4 0 3 0 0.477 0.404 1.000 36 BOTULINPATHWAY Blockade of Neurotransmitter Relase by Botulinum Toxin CHRM1, CHRNA1, SNAP25, STX1A, VAMP2 5 CHRM1(1), CHRNA1(4), SNAP25(3) 630165 8 7 8 2 3 1 2 1 1 0 0.473 0.411 1.000 37 SA_FAS_SIGNALING The TNF-type receptor Fas induces apoptosis on ligand binding. BCL2, CASP3, CASP8, CFL1, CFLAR, P11, PDE6D, TNFRSF6, TNFSF6 6 BCL2(1), CASP3(4), CASP8(3), CFLAR(1), PDE6D(1) 741621 10 6 10 2 4 0 3 1 2 0 0.367 0.429 1.000 38 SA_REG_CASCADE_OF_CYCLIN_EXPR Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. CCNA1, CCNA2, CCND1, CCNE1, CCNE2, CDK2, CDK4, CDKN1B, CDKN2A, E2F1, E2F2, E2F4, PRB1 13 CCNA1(2), CCNA2(2), CCND1(2), CCNE1(3), CDK2(4), CDK4(2), CDKN1B(2), CDKN2A(7), PRB1(3) 1772202 27 18 27 5 6 6 5 4 6 0 0.202 0.444 1.000 39 GLUCOCORTICOID_MINERALOCORTICOID_METABOLISM CPN2, CYP11A1, CYP11B2, CYP17A1, HSD11B1, HSD11B2, HSD3B1, HSD3B2 8 CPN2(1), CYP11B2(6), CYP17A1(2), HSD11B1(2), HSD11B2(1), HSD3B1(7), HSD3B2(12) 1348437 31 19 31 8 5 13 5 6 2 0 0.371 0.479 1.000 40 TELPATHWAY Telomerase is a ribonucleotide protein that adds telomeric repeats to the 3' ends of chromosomes. AKT1, BCL2, EGFR, G22P1, HSPCA, IGF1R, KRAS2, MYC, POLR2A, PPP2CA, PRKCA, RB1, TEP1, TERF1, TERT, TNKS, TP53, XRCC5 15 BCL2(1), EGFR(24), IGF1R(6), POLR2A(6), PRKCA(7), RB1(5), TEP1(16), TERT(2), TNKS(2), TP53(65), XRCC5(5) 5454378 139 78 119 27 17 31 30 24 37 0 0.0352 0.508 1.000 41 SYNTHESIS_AND_DEGRADATION_OF_KETONE_BODIES ACAT1, ACAT2, BDH, HMGCL, OXCT1 4 ACAT1(1), OXCT1(4) 653643 5 4 5 1 1 1 0 1 1 1 0.653 0.521 1.000 42 NEUROTRANSMITTERSPATHWAY Biosynthesis of neurotransmitters DBH, GAD1, HDC, PNMT, TH, TPH1 6 GAD1(4), HDC(6), TH(1), TPH1(10) 1180995 21 11 21 4 6 5 5 4 1 0 0.238 0.528 1.000 43 HSA00627_1,4_DICHLOROBENZENE_DEGRADATION Genes involved in 1,4-dichlorobenzene degradation CMBL 1 CMBL(1) 97782 1 1 1 3 0 0 0 0 1 0 0.995 0.536 1.000 44 HSA00430_TAURINE_AND_HYPOTAURINE_METABOLISM Genes involved in taurine and hypotaurine metabolism BAAT, CDO1, CSAD, GAD1, GAD2, GGT1, GGTL3, GGTL4 6 BAAT(3), CSAD(1), GAD1(4), GAD2(5), GGT1(1) 1093404 14 11 14 3 4 2 4 2 2 0 0.287 0.565 1.000 45 IONPATHWAY Activated phospholipase C hydrolyzes the lipid PIP3 into second messengers DAG, which activates protein kinase C, and IP3, which induces calcium influx into the cytoplasm. P2RY2, PLCG1, PRKCA, PRKCB1, PTK2B 4 PLCG1(4), PRKCA(7), PTK2B(6) 1295934 17 13 17 4 7 4 5 1 0 0 0.340 0.580 1.000 46 STEROID_BIOSYNTHESIS CYP17A1, F13B, HSD17B1, HSD17B2, HSD17B3, HSD17B4, HSD17B7, HSD3B1, HSD3B2 9 CYP17A1(2), F13B(9), HSD17B2(1), HSD3B1(7), HSD3B2(12) 1578573 31 18 31 7 6 9 7 5 3 1 0.323 0.621 1.000 47 ERBB4PATHWAY ErbB4 (aka HER4) is a receptor tyrosine kinase that binds neuregulins as well as members of the EGF family, which also target EGF receptors. ADAM17, ERBB4, NRG2, NRG3, PRKCA, PRKCB1, PSEN1 6 ADAM17(5), ERBB4(12), NRG2(2), NRG3(10), PRKCA(7), PSEN1(1) 1734276 37 23 37 8 5 18 8 3 3 0 0.306 0.626 1.000 48 IFNAPATHWAY Interferon alpha, active in the immune response, binds to the IFN receptor and activates Jak1 and Tyk2, which phosphorylate Stat1 and Stat2. IFNA1, IFNAR1, IFNAR2, IFNB1, ISGF3G, JAK1, STAT1, STAT2, TYK2 8 IFNAR2(1), IFNB1(3), JAK1(5), STAT1(2), STAT2(2), TYK2(2) 2102829 15 14 15 1 1 3 3 5 3 0 0.126 0.627 1.000 49 HSA00780_BIOTIN_METABOLISM Genes involved in biotin metabolism BTD, HLCS, SPCS1, SPCS3 4 BTD(4), SPCS3(1) 599076 5 5 5 1 0 1 1 2 1 0 0.589 0.639 1.000 50 EOSINOPHILSPATHWAY Recruitment of eosinophils in the inflammatory response observed in asthma occurs via the chemoattractant eotaxin binding to the CCR3 receptor. CCL11, CCL5, CCR3, CSF2, HLA-DRA, HLA-DRB1, IL3, IL5 8 CCR3(1), HLA-DRA(2), IL3(1) 583209 4 4 4 1 0 1 1 2 0 0 0.717 0.663 1.000 51 DNAFRAGMENTPATHWAY DNA fragmentation during apoptosis is effected by DFF, a caspase-activated DNAse, and by endonuclease G. CASP3, CASP7, DFFA, DFFB, ENDOG, GZMB, HMGB1, HMGB2, TOP2A, TOP2B 10 CASP3(4), DFFA(3), GZMB(3), HMGB2(4), TOP2A(3), TOP2B(4) 1862115 21 12 21 3 7 4 3 3 4 0 0.229 0.665 1.000 52 HSA00460_CYANOAMINO_ACID_METABOLISM Genes involved in cyanoamino acid metabolism ASRGL1, GBA, GBA3, GGT1, GGTL3, GGTL4, SHMT1, SHMT2 6 GBA(3), GBA3(7), GGT1(1), SHMT1(2), SHMT2(1) 1083987 14 12 14 4 3 4 4 1 2 0 0.570 0.674 1.000 53 ASBCELLPATHWAY B cells require interaction with helper T cells to produce antigen-specific immunoglobulins as a key element of the human immune response. CD28, CD4, CD80, HLA-DRA, HLA-DRB1, IL10, IL2, IL4, TNFRSF5, TNFRSF6, TNFSF5, TNFSF6 8 CD28(1), CD4(1), HLA-DRA(2), IL2(3) 765744 7 7 7 2 0 4 2 1 0 0 0.686 0.700 1.000 54 SETPATHWAY Cytotoxic T cells release perforin, which to allow entry into target cells of granzyme B, which activates caspases, and granzyme A, which induces caspase-independent apoptosis. ANP32A, APEX1, CREBBP, DFFA, DFFB, GZMA, GZMB, HMGB2, NME1, PRF1, SET 11 ANP32A(1), APEX1(1), CREBBP(2), DFFA(3), GZMA(1), GZMB(3), HMGB2(4), PRF1(4) 2057034 19 12 19 1 5 5 4 2 3 0 0.0436 0.728 1.000 55 HSA00062_FATTY_ACID_ELONGATION_IN_MITOCHONDRIA Genes involved in fatty acid elongation in mitochondria ACAA2, ECHS1, HADH, HADHA, HADHB, HSD17B10, HSD17B4, MECR, PPT1, PPT2 10 ACAA2(3), HADH(2), HADHA(2), HADHB(2), PPT1(2), PPT2(5) 1647330 16 10 15 3 4 1 6 0 4 1 0.0843 0.748 1.000 56 CDK5PATHWAY Cdk5, a regulatory kinase implicated in neuronal development, represses Mek1, which downregulates the MAP kinase pathway. CDK5, CDK5R1, DPM2, EGR1, HRAS, KLK2, MAP2K1, MAP2K2, MAPK1, MAPK3, NGFB, NGFR, RAF1 12 CDK5(1), HRAS(1), KLK2(2), MAP2K1(4), MAPK3(1), NGFR(2), RAF1(2) 1609791 13 10 13 1 3 5 0 3 2 0 0.0969 0.751 1.000 57 NOTCHPATHWAY Proteolysis and Signaling Pathway of Notch ADAM17, DLL1, FURIN, NOTCH1, PSEN1, RBPSUH 5 ADAM17(5), DLL1(2), FURIN(5), NOTCH1(5), PSEN1(1) 1824834 18 13 18 4 4 4 4 3 3 0 0.214 0.754 1.000 58 INOSITOL_METABOLISM ALDH6A1, ALDOA, ALDOB, ALDOC, TPI1 5 ALDOA(1), ALDOB(2), ALDOC(1), TPI1(3) 755037 7 5 7 0 0 3 2 1 1 0 0.159 0.767 1.000 59 HBXPATHWAY Hbx is a hepatitis B protein that activates a number of transcription factors, possibly by inducing calcium release from the mitochondrion to the cytoplasm. CREB1, GRB2, HBXIP, HRAS, PTK2B, SHC1, SOS1, SRC 8 GRB2(3), HRAS(1), PTK2B(6), SHC1(2), SOS1(9), SRC(2) 1707573 23 13 23 5 6 7 3 6 1 0 0.298 0.768 1.000 60 HSA00031_INOSITOL_METABOLISM Genes involved in inositol metabolism ALDH6A1, TPI1 2 TPI1(3) 318888 3 2 3 0 0 2 1 0 0 0 0.501 0.800 1.000 61 TCRMOLECULE T Cell Receptor and CD3 Complex CD3D, CD3E, CD3G, CD3Z, TRA@, TRB@ 3 CD3D(1) 220074 1 1 1 0 0 0 1 0 0 0 0.752 0.808 1.000 62 HSA00643_STYRENE_DEGRADATION Genes involved in styrene degradation FAH, GSTZ1, HGD 3 FAH(1), HGD(3) 434988 4 3 4 1 1 2 0 0 1 0 0.615 0.815 1.000 63 CARBON_FIXATION ALDOA, ALDOB, ALDOC, FBP1, FBP2, GOT1, GOT2, GPT, GPT2, MDH1, MDH2, ME1, ME2, ME3, PGK1, PKLR, PKM2, RPE, RPE, LOC440001, RPIA, TKT, TPI1 21 ALDOA(1), ALDOB(2), ALDOC(1), GOT1(2), GOT2(3), GPT2(2), MDH1(1), ME1(1), ME2(6), ME3(2), PGK1(4), PKLR(4), PKM2(2), RPE(1), RPIA(2), TPI1(3) 3473583 37 21 36 6 8 10 10 5 4 0 0.0534 0.835 1.000 64 TSP1PATHWAY Thrombospondin-1 (TSP-1) inhibits angiogenesis by inducing caspase-dependent apoptosis in microvascular endothelial cells. CASP3, CD36, FOS, FYN, JUN, MAPK14, THBS1 7 CASP3(4), CD36(3), FYN(2), MAPK14(1), THBS1(4) 1424547 14 8 14 4 5 3 0 3 3 0 0.565 0.837 1.000 65 CYANOAMINO_ACID_METABOLISM ATP6V0C, SHMT1, GBA3, GGT1, SHMT1, SHMT2 5 GBA3(7), GGT1(1), SHMT1(2), SHMT2(1) 806637 11 10 11 4 3 2 3 1 2 0 0.713 0.855 1.000 66 HSA00401_NOVOBIOCIN_BIOSYNTHESIS Genes involved in novobiocin biosynthesis GOT1, GOT2, TAT 3 GOT1(2), GOT2(3), TAT(2) 508518 7 6 7 3 3 2 2 0 0 0 0.711 0.856 1.000 67 EGFR_SMRTEPATHWAY EGF receptor activation inhibits SMRT, a transcriptional co-repressor that interacts with transcription factor complexes and gene silencers. EGF, EGFR, MAP2K1, MAP3K1, MAPK14, NCOR2, RARA, RXRA, THRA, THRB, ZNF145 10 EGF(7), EGFR(24), MAP2K1(4), MAP3K1(3), MAPK14(1), NCOR2(6), RARA(2), THRA(1), THRB(4) 3336198 52 33 42 11 6 10 11 13 12 0 0.227 0.864 1.000 68 HSA00072_SYNTHESIS_AND_DEGRADATION_OF_KETONE_BODIES Genes involved in synthesis and degradation of ketone bodies ACAT1, ACAT2, BDH1, BDH2, HMGCL, HMGCS1, HMGCS2, OXCT1, OXCT2 9 ACAT1(1), BDH2(1), HMGCS1(2), HMGCS2(5), OXCT1(4) 1396683 13 7 13 3 1 6 1 2 2 1 0.598 0.868 1.000 69 BBCELLPATHWAY Fas ligand expression by T cells induces apoptosis in Fas-expressing, inactive B cells. CD28, CD4, HLA-DRA, HLA-DRB1, TNFRSF5, TNFRSF6, TNFSF5, TNFSF6 4 CD28(1), CD4(1), HLA-DRA(2) 456144 4 4 4 2 0 2 1 1 0 0 0.871 0.873 1.000 70 BETAOXIDATIONPATHWAY Beta-Oxidation of Fatty Acids ACADL, ACADM, ACADS, ACAT1, ECHS1, HADHA 6 ACADM(3), ACAT1(1), HADHA(2) 1040385 6 6 6 4 0 0 0 2 3 1 0.947 0.873 1.000 71 HSA00950_ALKALOID_BIOSYNTHESIS_I Genes involved in alkaloid biosynthesis I DDC, GOT1, GOT2, TAT, TYR 5 DDC(6), GOT1(2), GOT2(3), TAT(2), TYR(6) 909063 19 16 19 6 6 3 4 4 2 0 0.532 0.876 1.000 72 IL17PATHWAY Activated T cells secrete IL-17, which stimulates fibroblasts and other cells to secrete inflammatory and hematopoietic cytokines. CD2, CD34, CD3D, CD3E, CD3G, CD3Z, CD4, CD58, CD8A, CSF3, IL17, IL3, IL6, IL8, KITLG, TRA@, TRB@ 13 CD2(2), CD34(2), CD3D(1), CD4(1), CD58(1), CD8A(1), IL3(1) 1202538 9 7 9 1 3 2 3 0 1 0 0.163 0.884 1.000 73 HSA00625_TETRACHLOROETHENE_DEGRADATION Genes involved in tetrachloroethene degradation AKR1B10, EPHX2, HSD3B7, RDH11, RDH12, RDH13, RDH14 7 AKR1B10(3), HSD3B7(2) 944409 5 5 5 1 0 4 1 0 0 0 0.613 0.894 1.000 74 SA_BONE_MORPHOGENETIC Bone morphogenetic protein binds to its receptor to induce ectopic bone formation and promote development of the viscera. BMP1, BMPR1A, BMPR1B, BMPR2, MADH1, MADH4, MADH6 4 BMP1(4), BMPR1A(1), BMPR1B(3), BMPR2(2) 1218663 10 7 10 2 3 2 2 2 1 0 0.457 0.899 1.000 75 CTLPATHWAY Cytotoxic T lymphocytes induce apoptosis in infected cells presenting antigen-MHC-I complexes via the perforin and Fas/Fas ligand pathways. B2M, CD3D, CD3E, CD3G, CD3Z, GZMB, HLA-A, ICAM1, ITGAL, ITGB2, PRF1, TNFRSF6, TNFSF6, TRA@, TRB@ 10 CD3D(1), GZMB(3), HLA-A(1), ITGAL(17), ITGB2(2), PRF1(4) 1692222 28 19 28 8 5 6 8 4 5 0 0.407 0.902 1.000 76 HSA00785_LIPOIC_ACID_METABOLISM Genes involved in lipoic acid metabolism LIAS, LIPT1, LOC387787 2 LIAS(2) 295281 2 1 2 0 1 1 0 0 0 0 0.608 0.903 1.000 77 FOSBPATHWAY FOSB gene expression and drug abuse CDK5, FOSB, GRIA2, JUND, PPP1R1B 5 CDK5(1), FOSB(2), GRIA2(7), PPP1R1B(1) 746781 11 11 11 5 1 3 3 1 3 0 0.770 0.905 1.000 78 HSA00830_RETINOL_METABOLISM Genes involved in retinol metabolism ALDH1A1, ALDH1A2, BCMO1, RDH5 4 ALDH1A1(1), ALDH1A2(6), BCMO1(2) 751812 9 7 9 3 1 4 2 1 1 0 0.638 0.910 1.000 79 1_AND_2_METHYLNAPHTHALENE_DEGRADATION ADH1A, ADH1A, ADH1B, ADH1C, ADH1B, ADH1C, ADH4, ADH6, ADH7, ADHFE1 7 ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH6(4), ADH7(3), ADHFE1(2) 1087857 26 14 26 8 2 20 1 1 2 0 0.696 0.916 1.000 80 D4GDIPATHWAY D4-GDI inhibits the pro-apoptotic Rho GTPases and is cleaved by caspase-3. ADPRT, APAF1, ARHGAP5, ARHGDIB, CASP1, CASP10, CASP3, CASP8, CASP9, CYCS, GZMB, JUN, PRF1 12 APAF1(4), ARHGAP5(4), CASP1(2), CASP10(3), CASP3(4), CASP8(3), CASP9(2), GZMB(3), PRF1(4) 2491377 29 18 29 5 5 9 6 7 2 0 0.202 0.921 1.000 81 CYTOKINEPATHWAY Intercellular signaling in the immune system occurs via secretion of cytokines, which promote antigen-dependent B and T cell response. IFNA1, IFNB1, IFNG, IL10, IL12A, IL12B, IL13, IL14, IL15, IL16, IL17, IL18, IL1A, IL2, IL3, IL4, IL5, IL6, IL8, IL9, LTA, TNF 20 IFNB1(3), IFNG(3), IL12A(2), IL15(1), IL16(4), IL1A(2), IL2(3), IL3(1) 1921455 19 14 19 4 1 8 6 3 1 0 0.337 0.926 1.000 82 NUCLEOTIDE_METABOLISM ADSL, ADSS, DHFR, HPRT1, IMPDH1, MTHFD2, NME2, OAZ1, POLA, POLB, POLD1, POLG, PRPS2, RRM1, SAT, SRM 14 HPRT1(1), IMPDH1(3), POLB(2), POLD1(1), POLG(8), PRPS2(1), RRM1(5) 2454354 21 13 21 2 10 2 5 4 0 0 0.0257 0.929 1.000 83 CELLCYCLEPATHWAY Cyclins interact with cyclin-dependent kinases to form active kinase complexes that regulate progression through the cell cycle. CCNA1, CCNB1, CCND1, CCND2, CCND3, CCNE1, CCNH, CDC2, CDC25A, CDK2, CDK4, CDK6, CDK7, CDKN1A, CDKN1B, CDKN2A, CDKN2B, CDKN2C, CDKN2D, E2F1, RB1, RBL1, TFDP1 22 CCNA1(2), CCNB1(1), CCND1(2), CCND3(1), CCNE1(3), CDC25A(2), CDK2(4), CDK4(2), CDK7(2), CDKN1B(2), CDKN2A(7), CDKN2D(1), RB1(5), RBL1(4), TFDP1(2) 3159339 40 26 40 9 8 10 9 6 7 0 0.321 0.933 1.000 84 CIRCADIANPATHWAY A heterodimer composed of Bmal1 and Clock acts as a transcription factor for proteins that regulate circadian rhythms, such as Per and Cry. ARNTL, CLOCK, CRY1, CRY2, CSNK1E, PER1 6 ARNTL(2), CLOCK(2), CRY1(3), CRY2(2), CSNK1E(2), PER1(2) 1660617 13 8 13 3 6 3 2 0 2 0 0.417 0.937 1.000 85 PANTOTHENATE_AND_COA_BIOSYNTHESIS BCAT1, COASY, DPYD, DPYS, ENPP1, ENPP3, PANK1, PANK2, PANK3, PANK4, PPCS, UPB1 12 COASY(3), DPYD(10), DPYS(6), ENPP1(3), ENPP3(5), PANK1(2), PANK2(4), PANK3(2), PANK4(1), PPCS(1) 2700873 37 25 37 8 4 12 13 3 4 1 0.233 0.960 1.000 86 TERPENOID_BIOSYNTHESIS FDFT1, FDPS, FDPS, LOC402397, IDI1, SQLE 4 FDFT1(1), FDPS(1), IDI1(1) 620232 3 3 3 2 0 0 2 0 1 0 0.859 0.962 1.000 87 SA_DIACYLGLYCEROL_SIGNALING DAG (diacylglycerol) signaling activity ESR1, ESR2, ITPKA, PDE1A, PDE1B, PLCB1, PLCB2, PRL, TRH, VIP 10 ESR2(2), ITPKA(1), PDE1A(5), PDE1B(6), PLCB1(9), PLCB2(4), TRH(1), VIP(1) 2155590 29 22 29 7 4 9 9 2 5 0 0.393 0.963 1.000 88 VALINE_LEUCINE_AND_ISOLEUCINE_BIOSYNTHESIS BCAT1, IARS, LARS, LARS2, PDHA1, PDHA2, PDHB 7 IARS(3), LARS(3), LARS2(1), PDHA1(1), PDHA2(8) 1939257 16 12 16 4 3 6 3 2 2 0 0.531 0.964 1.000 89 ST_STAT3_PATHWAY The transcription factor STAT3 is involved in cell growth regulation and is commonly upregulated in tumors. CISH, IL6, IL6R, JAK1, JAK2, JAK3, PIAS3, PTPRU, REG1A, SRC, STAT3 11 IL6R(5), JAK1(5), JAK2(2), JAK3(3), PIAS3(4), PTPRU(6), REG1A(5), SRC(2), STAT3(4) 2987124 36 24 36 8 7 9 8 7 5 0 0.234 0.967 1.000 90 LDLPATHWAY Low density lipoproteins (LDL) are present in blood plasma, contain cholesterol and triglycerides, and contribute to atherogenic plaque formation. ACAT1, CCL2, CSF1, IL6, LDLR, LPL 6 ACAT1(1), CSF1(1), LDLR(1), LPL(2) 1032516 5 5 5 2 0 1 2 1 1 0 0.781 0.969 1.000 91 STAT3PATHWAY The STAT transcription factors are phosphorylated and activated by JAK kinases in response to cytokine signaling. FRAP1, JAK1, JAK2, JAK3, MAPK1, MAPK3, STAT3, TYK2 7 JAK1(5), JAK2(2), JAK3(3), MAPK3(1), STAT3(4), TYK2(2) 2290782 17 15 17 4 2 3 5 5 2 0 0.400 0.970 1.000 92 APOPTOSIS APAF1, BAD, BAK1, BCL2L7P1, BAX, BCL2, BCL2L1, BCL2L11, BID, BIRC2, BIRC3, BIRC4, BIRC5, BNIP3L, CASP1, CASP10, CASP1, COPl, CASP2, CASP3, CASP4, CASP6, CASP7, CASP8, CASP9, CHUK, CYCS, DFFA, DFFB, FADD, FAS, FASLG, GZMB, HELLS, HRK, IKBKB, IKBKG, IRF1, IRF2, IRF3, IRF4, IRF5, IRF6, IRF7, JUN, LTA, MAP2K4, MAP3K1, MAPK10, MDM2, MYC, NFKB1, NFKBIA, NFKBIB, NFKBIE, PRF1, RELA, RIPK1, TNF, TNFRSF10B, TNFRSF1A, TNFRSF1B, TNFRSF21, TNFRSF25, TNFRSF25, PLEKHG5, TNFSF10, TP53, TP73, TRADD, TRAF1, TRAF2, TRAF3 66 APAF1(4), BAX(1), BCL2(1), BCL2L11(2), BID(1), BIRC2(2), BIRC3(2), CASP1(2), CASP10(3), CASP2(2), CASP3(4), CASP4(1), CASP8(3), CASP9(2), CHUK(1), DFFA(3), FAS(2), FASLG(2), GZMB(3), HELLS(1), IKBKB(2), IRF1(1), IRF2(1), IRF3(1), IRF4(1), IRF6(3), IRF7(1), MAP2K4(2), MAP3K1(3), MAPK10(1), MDM2(1), NFKB1(2), NFKBIE(1), PLEKHG5(3), PRF1(4), RIPK1(3), TNFRSF10B(1), TNFRSF1B(1), TNFRSF21(2), TNFRSF25(1), TNFSF10(1), TP53(65), TP73(3), TRAF3(1) 11214357 147 76 137 27 16 38 36 22 35 0 0.0169 0.971 1.000 93 TERCPATHWAY hTERC, the RNA subunit of telomerase, and hTERT, the catalytic protein subunit, are required for telomerase activity and are overexpressed in many cancers. NFYA, NFYB, NFYC, RB1, SP1, SP3 6 NFYB(1), NFYC(1), RB1(5), SP3(1) 1295934 8 7 8 3 1 1 1 1 4 0 0.832 0.972 1.000 94 HSA00363_BISPHENOL_A_DEGRADATION Genes involved in bisphenol A degradation AKR1B10, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, HSD3B7, PON1, PON2, PON3, RDH11, RDH12, RDH13, RDH14 14 AKR1B10(3), DHRS2(2), DHRS3(1), HSD3B7(2), PON1(1), PON3(5) 1755948 14 13 14 4 1 7 5 1 0 0 0.510 0.977 1.000 95 VOBESITYPATHWAY The adipose tissue of obese individuals overexpresses a key glucocorticoid-metabolizing enzyme, activating inactive circulating corticosteroids and inducing insulin resistance. APM1, HSD11B1, LPL, NR3C1, PPARG, RETN, RXRA, TNF 7 HSD11B1(2), LPL(2), NR3C1(1), PPARG(2) 1124493 7 7 7 3 0 3 2 1 1 0 0.846 0.978 1.000 96 CAPROLACTAM_DEGRADATION AKR1A1, ECHS1, EHHADH, HADHA, SDS 5 EHHADH(3), HADHA(2) 929574 5 3 5 4 0 2 1 0 1 1 0.974 0.979 1.000 97 FOLATE_BIOSYNTHESIS ALPI, ALPL, ALPP, ALPP, ALPPL2, ALPPL2, DHFR, FPGS, GCH1, GGH, SPR 9 ALPI(2), ALPL(2), ALPP(3), ALPPL2(2), FPGS(1), GCH1(3), GGH(1) 1289226 14 12 14 5 2 1 4 3 4 0 0.655 0.980 1.000 98 AKAP13PATHWAY A-kinase anchor protein 13 (AKAP13) localizes protein kinase A holoenzyme and is a nucleotide exchange factor for Rho/Rac. AKAP13, ARHA, EDG2, EDG4, EDG7, GNA12, PRKACB, PRKACG, PRKAG1, PRKAR2A, PRKAR2B 7 AKAP13(7), GNA12(1), PRKACB(2), PRKACG(1) 1963122 11 8 11 1 2 5 2 2 0 0 0.226 0.982 1.000 99 ST_PAC1_RECEPTOR_PATHWAY The signaling peptide PACAP binds to its receptor, PAC1R, which activates adenylyl cyclase and phospholipase C. ASAH1, CAMP, DAG1, GAS, GNAQ, ITPKA, ITPKB, PACAP 6 ASAH1(2), DAG1(2), GNAQ(2), ITPKA(1), ITPKB(4) 1193766 11 8 11 4 1 4 3 2 1 0 0.701 0.982 1.000 100 METHIONINEPATHWAY Catabolic Pathways for Methionine, Isoleucine, Threonine and Valine BCKDHB, BCKDK, CBS, CTH, MUT 5 BCKDHB(4), BCKDK(2), CBS(1), MUT(4) 949440 11 9 11 4 2 3 2 1 3 0 0.706 0.983 1.000 101 BLOOD_GROUP_GLYCOLIPID_BIOSYNTHESIS_LACTOSERIES ABO, FUT1, FUT2, FUT3, FUT5, FUT6, SIAT6, ST3GAL3 7 ABO(1), FUT1(2), FUT3(1), ST3GAL3(1) 988527 5 5 5 2 3 0 1 1 0 0 0.708 0.983 1.000 102 PARKINPATHWAY In Parkinson's disease, dopaminergic neurons contain Lewy bodies consisting of alpha-synuclein and parkin, an E3 ubiquitin ligase that targets glycosylated alpha-synuclein. GPR37, PARK2, PNUTL1, SNCA, SNCAIP, UBE2E2, UBE2F, UBE2G1, UBE2G2, UBE2L3, UBE2L6, UBL1 10 GPR37(2), PARK2(5), SNCA(2), SNCAIP(2), UBE2L6(1) 1238013 12 10 12 4 1 5 3 2 1 0 0.696 0.984 1.000 103 HEME_BIOSYNTHESIS ALAD, ALAS1, ALAS2, CPOX, FECH, HMBS, PPOX, UROD, UROS 9 ALAD(2), ALAS1(3), CPOX(3), HMBS(2), PPOX(2) 1480146 12 7 12 4 4 2 2 2 2 0 0.641 0.984 1.000 104 IL10PATHWAY The cytokine IL-10 inhibits the inflammatory response by macrophages via activation of heme oxygenase 1. BLVRA, BLVRB, HMOX1, IL10, IL10RA, IL10RB, IL1A, IL6, JAK1, STAT1, STAT3, STAT5A, TNF 13 BLVRB(1), HMOX1(3), IL10RA(3), IL10RB(2), IL1A(2), JAK1(5), STAT1(2), STAT3(4), STAT5A(2) 2365602 24 18 24 5 1 4 8 7 4 0 0.279 0.986 1.000 105 TUBBYPATHWAY Tubby is activated by phospholipase C activity and hydrolysis of PIP2, after which it enters the nucleus and regulates transcription. CHRM1, GNAQ, GNB1, GNGT1, HTR2C, PLCB1, TUB 7 CHRM1(1), GNAQ(2), GNB1(1), GNGT1(1), HTR2C(5), PLCB1(9), TUB(3) 1384428 22 18 22 6 4 11 6 0 1 0 0.536 0.986 1.000 106 PTC1PATHWAY The binding of extracellular signaling protein Sonic hedgehog to the Patched receptor (Ptc1) allows progression through G1 and may inhibit the G2/M transition. CCNB1, CCNH, CDC2, CDC25A, CDC25B, CDC25C, CDK7, MNAT1, PTCH, SHH, XPO1 9 CCNB1(1), CDC25A(2), CDC25B(1), CDK7(2), MNAT1(2), SHH(3), XPO1(3) 1709637 14 10 14 4 1 6 3 2 2 0 0.663 0.986 1.000 107 STEMPATHWAY In the absence of infection, bone marrow stromal cells release hematopoietic cytokines; activated macrophages and Th cells induce hematopoiesis during infection. CD4, CD8A, CSF1, CSF2, CSF3, EPO, IL11, IL2, IL3, IL4, IL5, IL6, IL7, IL8, IL9 14 CD4(1), CD8A(1), CSF1(1), EPO(1), IL2(3), IL3(1) 1162548 8 7 8 3 0 5 3 0 0 0 0.708 0.987 1.000 108 TCAPOPTOSISPATHWAY HIV infection upregulates Fas ligand in macrophages and CD4 in helper T cells, leading to widespread Fas-induced T cell apoptosis. CCR5, CD28, CD3D, CD3E, CD3G, CD3Z, CD4, TNFRSF6, TNFSF6, TRA@, TRB@ 6 CCR5(1), CD28(1), CD3D(1), CD4(1) 620748 4 4 4 4 0 2 1 0 1 0 0.971 0.987 1.000 109 1_2_DICHLOROETHANE_DEGRADATION ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1 8 ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH9A1(2) 1555095 20 14 20 6 4 9 5 2 0 0 0.467 0.988 1.000 110 ASCORBATE_AND_ALDARATE_METABOLISM ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1 8 ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH9A1(2) 1555095 20 14 20 6 4 9 5 2 0 0 0.467 0.988 1.000 111 CDC25PATHWAY The protein phosphatase Cdc25 is phosphorylated by Chk1 and activates Cdc2 to stimulate eukaryotic cells into M phase. ATM, CDC2, CDC25A, CDC25B, CDC25C, CHEK1, MYT1, WEE1, YWHAH 8 ATM(14), CDC25A(2), CDC25B(1), CHEK1(6), MYT1(5), WEE1(1) 2666559 29 20 28 8 0 10 6 5 8 0 0.732 0.990 1.000 112 HSA00900_TERPENOID_BIOSYNTHESIS Genes involved in terpenoid biosynthesis FDFT1, FDPS, GGPS1, IDI1, IDI2, SQLE 6 FDFT1(1), FDPS(1), GGPS1(1), IDI1(1) 828567 4 4 4 3 0 1 2 0 1 0 0.914 0.990 1.000 113 RACCYCDPATHWAY Ras, Rac, and Rho coordinate to induce cyclin D1 expression and activate cdk2 to promote the G1/S transition. AKT1, ARHA, CCND1, CCNE1, CDK2, CDK4, CDK6, CDKN1A, CDKN1B, E2F1, HRAS, MAPK1, MAPK3, NFKB1, NFKBIA, PAK1, PIK3CA, PIK3R1, RAC1, RAF1, RB1, RELA, TFDP1 22 CCND1(2), CCNE1(3), CDK2(4), CDK4(2), CDKN1B(2), HRAS(1), MAPK3(1), NFKB1(2), PAK1(5), PIK3CA(5), PIK3R1(1), RAF1(2), RB1(5), TFDP1(2) 3916311 37 23 36 9 14 6 7 5 5 0 0.215 0.991 1.000 114 BENZOATE_DEGRADATION_VIA_COA_LIGATION ACAT1, ACAT2, ACYP1, ACYP2, ECHS1, EHHADH, GCDH, HADHA, SDHB, SDS 10 ACAT1(1), ACYP2(1), EHHADH(3), GCDH(1), HADHA(2) 1505172 8 6 8 3 0 2 3 0 2 1 0.798 0.994 1.000 115 RIBOFLAVIN_METABOLISM ACP1, ACP2, ACP5, ACPP, ACPT, ENPP1, ENPP3, FLAD1, RFK, TYR 10 ACP1(1), ACP2(1), ACP5(2), ACPP(6), ENPP1(3), ENPP3(5), FLAD1(1), TYR(6) 1881852 25 22 25 7 3 4 11 4 3 0 0.464 0.995 1.000 116 BIOSYNTHESIS_OF_STEROIDS DHCR7, FDFT1, FDPS, FDPS, LOC402397, HMGCR, IDI1, LSS, MVD, MVK, NQO1, NQO2, PMVK, SC5DL, SQLE, VKORC1 14 DHCR7(1), FDFT1(1), FDPS(1), HMGCR(3), IDI1(1), LSS(3), MVD(1), NQO1(3), NQO2(2), SC5DL(2), VKORC1(1) 2160879 19 15 19 5 3 5 6 3 2 0 0.448 0.995 1.000 117 MRPPATHWAY Cancer cells resistant to numerous drugs are called multidrug-resistant (MDR) and express ATP-binding cassette transporter proteins that pump the drugs out of cells. ABCB1, ABCB11, ABCB4, ABCC1, ABCC3, GSTP1 6 ABCB1(10), ABCB11(5), ABCB4(10), ABCC1(3), ABCC3(3), GSTP1(2) 2777499 33 25 33 9 3 9 9 6 6 0 0.424 0.995 1.000 118 HSA00710_CARBON_FIXATION Genes involved in carbon fixation ALDOA, ALDOB, ALDOC, FBP1, FBP2, GOT1, GOT2, GPT, GPT2, MDH1, MDH2, ME1, ME3, PGK1, PGK2, PKLR, PKM2, RPE, RPIA, TKT, TKTL1, TKTL2, TPI1 23 ALDOA(1), ALDOB(2), ALDOC(1), GOT1(2), GOT2(3), GPT2(2), MDH1(1), ME1(1), ME3(2), PGK1(4), PGK2(11), PKLR(4), PKM2(2), RPE(1), RPIA(2), TKTL1(6), TKTL2(6), TPI1(3) 3882642 54 35 53 11 10 15 14 8 7 0 0.0877 0.995 1.000 119 PS1PATHWAY Presenilin is required for gamma-secretase activity to activate Notch signaling; presenilin also inhibits beta-catenin in the Wnt/Frizzled pathway. ADAM17, APC, AXIN1, BTRC, CTNNB1, DLL1, DVL1, FZD1, GSK3B, NOTCH1, PSEN1, RBPSUH, TCF1, WNT1 12 ADAM17(5), APC(6), AXIN1(2), BTRC(5), CTNNB1(9), DLL1(2), FZD1(2), GSK3B(1), NOTCH1(5), PSEN1(1), WNT1(3) 4184631 41 26 39 8 8 9 12 7 5 0 0.0844 0.995 1.000 120 HSA00750_VITAMIN_B6_METABOLISM Genes involved in vitamin B6 metabolism AOX1, PDXK, PDXP, PNPO, PSAT1 5 AOX1(6), PNPO(1), PSAT1(1) 940668 8 6 8 5 2 4 0 0 2 0 0.950 0.996 1.000 121 ERYTHPATHWAY Erythropoietin selectively stimulates erythrocyte differentiation from CFU-GEMM cells in bone marrow. CCL3, CSF2, CSF3, EPO, FLT3, IGF1, IL11, IL1A, IL3, IL6, IL9, KITLG, TGFB1, TGFB2, TGFB3 14 CCL3(1), EPO(1), FLT3(7), IGF1(3), IL1A(2), IL3(1), TGFB1(2), TGFB2(5), TGFB3(1) 1582959 23 15 23 9 3 6 3 7 4 0 0.809 0.996 1.000 122 CBLPATHWAY Activated EGF receptors undergo endocytosis into clathrin-coated vesicles, where they are recycled to the membrane or ubiquitinated by Cbl. CBL, CSF1R, EGF, EGFR, GRB2, MET, PDGFRA, PRKCA, PRKCB1, SH3GLB1, SH3GLB2, SH3KBP1, SRC 12 CBL(7), CSF1R(3), EGF(7), EGFR(24), GRB2(3), MET(10), PDGFRA(7), PRKCA(7), SH3GLB1(1), SH3KBP1(2), SRC(2) 3753513 73 45 63 19 11 17 12 17 16 0 0.460 0.996 1.000 123 FATTY_ACID_BIOSYNTHESIS_PATH_2 ACAA1, ACAA2, ACAT1, ACAT2, ECHS1, EHHADH, HADHA, HADHB, SDS 9 ACAA2(3), ACAT1(1), EHHADH(3), HADHA(2), HADHB(2) 1606566 11 8 11 4 0 2 5 0 3 1 0.740 0.996 1.000 124 REDUCTIVE_CARBOXYLATE_CYCLE_CO2_FIXATION ACO1, ACO2, FH, IDH1, IDH2, MDH1, MDH2, SDHB, SUCLA2 9 ACO1(2), ACO2(1), FH(1), IDH1(2), IDH2(2), MDH1(1) 1717764 9 8 9 3 1 2 2 2 2 0 0.736 0.997 1.000 125 HSA00290_VALINE_LEUCINE_AND_ISOLEUCINE_BIOSYNTHESIS Genes involved in valine, leucine and isoleucine biosynthesis BCAT1, BCAT2, IARS, IARS2, ILVBL, LARS, LARS2, PDHA1, PDHA2, PDHB, VARS, VARS2 12 IARS(3), IARS2(4), LARS(3), LARS2(1), PDHA1(1), PDHA2(8), VARS(5), VARS2(6) 3578073 31 21 31 7 7 10 7 2 5 0 0.269 0.997 1.000 126 FEEDERPATHWAY Sugars such as mannose, galactose, and fructose are enzymatically converted to glucose via feeder pathways that lead to glycolysis. HK1, KHK, LCT, MPI, PGM1, PYGL, PYGM, TPI1, TREH 9 HK1(3), KHK(1), LCT(12), PGM1(2), PYGM(3), TPI1(3), TREH(1) 2598576 25 14 25 5 4 9 8 1 3 0 0.222 0.997 1.000 127 MSPPATHWAY Macrophage stimulating protein is synthesized as pro-MSP by the liver and, on proteolysis, binds to monocyte receptor kinase RON to induce macrophage development. CCL2, CSF1, IL1B, MST1, MST1R, TNF 6 CSF1(1), MST1(5), MST1R(2) 1278648 8 8 6 7 1 1 4 0 2 0 0.992 0.997 1.000 128 NGFPATHWAY Nerve growth factor (NGF) stimulates neural survival and proliferation via the TrkA and p75 receptors, which induce DAG and IP3 production and activate Ras. CSNK2A1, DPM2, ELK1, FOS, GRB2, HRAS, JUN, KLK2, MAP2K1, MAPK3, MAPK8, NGFB, NGFR, PIK3CA, PIK3R1, PLCG1, RAF1, SHC1, SOS1 18 GRB2(3), HRAS(1), KLK2(2), MAP2K1(4), MAPK3(1), MAPK8(3), NGFR(2), PIK3CA(5), PIK3R1(1), PLCG1(4), RAF1(2), SHC1(2), SOS1(9) 3692625 39 25 38 9 7 12 9 8 3 0 0.254 0.997 1.000 129 SODDPATHWAY Some members of the tumor necrosis factor receptor family have cytoplasmic death domains that promote apoptosis when active and are repressed by silencers called SODDs. BAG4, BIRC3, CASP8, FADD, RIPK1, TNF, TNFRSF1A, TNFRSF1B, TRADD, TRAF2 10 BIRC3(2), CASP8(3), RIPK1(3), TNFRSF1B(1) 1642944 9 6 9 2 0 2 3 1 3 0 0.584 0.997 1.000 130 SA_CASPASE_CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. ADPRT, APAF1, BIRC2, BIRC3, BIRC4, CASP10, CASP3, CASP7, CASP8, CASP9, DFFA, DFFB, GZMB, PRF1, SCAP, SREBF1, SREBF2, TNFRSF6, TNFSF6 15 APAF1(4), BIRC2(2), BIRC3(2), CASP10(3), CASP3(4), CASP8(3), CASP9(2), DFFA(3), GZMB(3), PRF1(4), SCAP(4), SREBF1(1) 3552015 35 22 35 8 6 8 7 7 7 0 0.286 0.998 1.000 131 HSA00440_AMINOPHOSPHONATE_METABOLISM Genes involved in aminophosphonate metabolism CARM1, CHPT1, HEMK1, LCMT1, LCMT2, METTL2B, METTL6, PCYT1A, PCYT1B, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, WBSCR22 16 CARM1(3), LCMT1(1), LCMT2(4), METTL2B(3), METTL6(1), PCYT1A(2), PCYT1B(1), PRMT2(1), PRMT3(1), PRMT5(1), PRMT6(2), PRMT7(3), PRMT8(5), WBSCR22(1) 2744862 29 19 28 7 7 4 13 3 2 0 0.268 0.998 1.000 132 HSA00471_D_GLUTAMINE_AND_D_GLUTAMATE_METABOLISM Genes involved in D-glutamine and D-glutamate metabolism GLS, GLS2, GLUD1, GLUD2 4 GLS(1), GLS2(2), GLUD1(3), GLUD2(3) 876297 9 8 9 4 1 3 4 1 0 0 0.823 0.998 1.000 133 GLUTATHIONE_METABOLISM ANPEP, G6PD, GCLC, GCLM, GGT1, GPX1, GPX2, GPX3, GPX4, GPX5, GSS, GSTA1, GSTA2, GSTA3, GSTA4, GSTM1, GSTM2, GSTM3, GSTM4, GSTM5, GSTO2, GSTP1, GSTT1, GSTT2, GSTZ1, IDH1, IDH2, MGST1, MGST2, MGST3, PGD 29 ANPEP(3), G6PD(2), GCLC(6), GCLM(1), GGT1(1), GPX1(1), GPX3(1), GPX5(3), GSS(2), GSTA1(1), GSTA2(2), GSTA3(2), GSTM2(1), GSTM3(1), GSTM4(1), GSTM5(2), GSTO2(1), GSTP1(2), IDH1(2), IDH2(2), MGST1(1), MGST3(2), PGD(1) 3467649 41 22 41 9 6 14 14 2 4 1 0.171 0.998 1.000 134 HSA00232_CAFFEINE_METABOLISM Genes involved in caffeine metabolism CYP1A2, CYP2A13, CYP2A6, CYP2A7, NAT1, NAT2, XDH 7 CYP1A2(1), CYP2A13(3), CYP2A6(2), CYP2A7(2), NAT1(1), NAT2(1), XDH(8) 1542195 18 16 18 9 1 5 6 1 5 0 0.811 0.998 1.000 135 S1PPATHWAY At low cholesterol concentrations, sterol-regulatory element binding proteins (SREBPs) act as transcription factors to promote cholesterol uptake and biosynthesis. EPLIN, HMGCS1, LDLR, MBTPS1, MBTPS2, SCAP, SREBF1, SREBF2 7 HMGCS1(2), LDLR(1), MBTPS1(3), MBTPS2(1), SCAP(4), SREBF1(1) 2325096 12 8 12 3 2 3 3 2 2 0 0.445 0.998 1.000 136 ACETAMINOPHENPATHWAY Acetaminophen selectively inhibits Cox-3, which is localized to the brain, and yields the toxic metabolite NAPQI when processed by CAR in the liver. CYP1A2, CYP2E1, CYP3A, NR1I3, PTGS1, PTGS2 5 CYP1A2(1), CYP2E1(3), NR1I3(1), PTGS1(3), PTGS2(4) 1026969 12 9 12 7 2 3 4 1 2 0 0.902 0.999 1.000 137 TCRAPATHWAY The kinases Lck and Fyn phosphorylate and activate the T cell receptor, which recognizes antigen-bound MHCII and leads to T cell activation. CD3D, CD3E, CD3G, CD3Z, CD4, FYN, HLA-DRA, HLA-DRB1, LCK, PTPRC, TRA@, TRB@, ZAP70 10 CD3D(1), CD4(1), FYN(2), HLA-DRA(2), LCK(5), PTPRC(10), ZAP70(2) 1761108 23 16 23 7 3 8 6 2 4 0 0.692 0.999 1.000 138 PKCPATHWAY Gq-coupled receptors promote hydrolysis of PIP2 to DAG and IP3, which causes calcium influx and activates protein kinase C. GNAQ, NFKB1, NFKBIA, PLCB1, PRKCA, PRKCB1, RELA 6 GNAQ(2), NFKB1(2), PLCB1(9), PRKCA(7) 1589538 20 18 20 6 5 7 7 0 1 0 0.584 0.999 1.000 139 IL6PATHWAY IL-6 binding to its receptor activates JAK kinases and a variety of transcription factors, with effects in neuronal differentiation, bone loss, and inflammation. CEBPB, CSNK2A1, ELK1, FOS, GRB2, HRAS, IL6, IL6R, IL6ST, JAK1, JAK2, JAK3, JUN, MAP2K1, MAPK3, PTPN11, RAF1, SHC1, SOS1, SRF, STAT3 21 GRB2(3), HRAS(1), IL6R(5), JAK1(5), JAK2(2), JAK3(3), MAP2K1(4), MAPK3(1), PTPN11(1), RAF1(2), SHC1(2), SOS1(9), STAT3(4) 4642452 42 28 42 9 6 9 9 14 4 0 0.196 0.999 1.000 140 SA_TRKA_RECEPTOR The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth. AKT1, AKT2, AKT3, ARHA, CDKN1A, ELK1, GRB2, HRAS, MAP2K1, MAP2K2, NGFB, NGFR, NTRK1, PIK3CA, PIK3CD, SHC1, SOS1 15 AKT2(1), AKT3(2), GRB2(3), HRAS(1), MAP2K1(4), NGFR(2), NTRK1(6), PIK3CA(5), SHC1(2), SOS1(9) 3167466 35 25 34 9 2 12 8 9 4 0 0.424 0.999 1.000 141 BLOOD_CLOTTING_CASCADE F10, F11, F12, F13B, F2, F5, F7, F8, F8A1, F9, FGA, FGB, FGG, LPA, PLG, PLAT, PLAU, PLG, SERPINB2, SERPINE1, SERPINF2, VWF 20 F10(1), F11(5), F12(1), F13B(9), F2(5), F5(17), F7(2), F8(14), F9(8), FGA(2), FGB(10), FGG(2), LPA(16), PLAT(4), PLG(8), SERPINB2(3), SERPINE1(3), VWF(7) 6813006 117 58 117 25 12 37 28 23 16 1 0.169 0.999 1.000 142 GLYCOSPHINGOLIPID_METABOLISM ARSA, ARSB, ARSD, ARSE, ASAH1, GAL3ST1, GALC, GBA, GBAP, GLA, GLB1, LCT, NEU1, NEU2, NEU3, NEU4, PPAP2A, PPAP2B, PPAP2C, SMPD1, SMPD2, SPTLC1, SPTLC2, UGCG 23 ARSA(1), ARSB(1), ARSD(2), ASAH1(2), GAL3ST1(3), GALC(3), GBA(3), GLA(2), LCT(12), NEU3(1), NEU4(5), PPAP2B(1), SMPD1(1), SMPD2(1), SPTLC1(1), SPTLC2(1) 4733010 40 32 39 8 6 15 12 3 4 0 0.128 0.999 1.000 143 CDMACPATHWAY Cadmium 2+ promotes cell proliferation in cultured macrophages by entering the cell via calcium channels and activating the MAP kinase pathway. CUZD1, FOS, HRAS, JUN, MAP2K1, MAPK1, MAPK3, MYC, NFKB1, NFKBIA, PLCB1, PRKCA, PRKCB1, RAF1, RELA, TNF 15 CUZD1(1), HRAS(1), MAP2K1(4), MAPK3(1), NFKB1(2), PLCB1(9), PRKCA(7), RAF1(2) 2984673 27 22 27 7 8 7 7 3 2 0 0.324 0.999 1.000 144 HSA00300_LYSINE_BIOSYNTHESIS Genes involved in lysine biosynthesis AADAT, AASDHPPT, AASS, KARS 4 AASDHPPT(1), AASS(4), KARS(3) 915642 8 4 8 5 2 3 2 0 1 0 0.965 0.999 1.000 145 DNA_POLYMERASE POLA, POLB, POLD1, POLD2, POLE, POLG, POLL, POLQ, POLS 7 POLB(2), POLD1(1), POLE(12), POLG(8), POLQ(10) 3233643 33 19 33 8 13 2 12 3 3 0 0.213 0.999 1.000 146 MALATEXPATHWAY The tricarboxylate transfer pathway shuttles acetyl groups of acetyl-CoA between mitochondria and the cytoplasm. ACLY, CS, MDH1, ME1, PC, PDHA1, SLC25A1, SLC25A11 8 ACLY(1), CS(1), MDH1(1), ME1(1), PC(1), PDHA1(1), SLC25A11(2) 1784586 8 7 8 3 2 1 1 3 1 0 0.699 0.999 1.000 147 HSA04320_DORSO_VENTRAL_AXIS_FORMATION Genes involved in dorso-ventral axis formation BRAF, CPEB1, EGFR, ERBB2, ERBB4, ETS1, ETS2, ETV6, ETV7, FMN2, GRB2, KRAS, MAP2K1, MAPK1, MAPK3, NOTCH1, NOTCH2, NOTCH3, NOTCH4, PIWIL1, PIWIL2, PIWIL3, PIWIL4, RAF1, SOS1, SOS2, SPIRE1, SPIRE2 28 BRAF(13), CPEB1(2), EGFR(24), ERBB2(5), ERBB4(12), ETS1(1), ETS2(1), ETV6(3), FMN2(13), GRB2(3), KRAS(35), MAP2K1(4), MAPK3(1), NOTCH1(5), NOTCH2(20), NOTCH3(4), NOTCH4(15), PIWIL1(4), PIWIL2(6), PIWIL3(5), PIWIL4(3), RAF1(2), SOS1(9), SOS2(5), SPIRE1(4), SPIRE2(1) 10160556 200 95 153 35 26 83 36 33 22 0 0.00402 0.999 1.000 148 SARSPATHWAY The SARS coronavirus has a 30kb RNA genome containing rep, a large gene encoding viral protease Mpro. ANPEP, CKM, EIF4E, FBL, GPT, LDHA, LDHB, LDHC, MAPK14, NCL 10 ANPEP(3), CKM(1), EIF4E(2), LDHA(3), LDHC(4), MAPK14(1), NCL(4) 1712991 18 13 18 9 4 4 5 2 3 0 0.924 0.999 1.000 149 LYSINE_BIOSYNTHESIS AADAT, AASDH, AASDHPPT, AASS, KARS 5 AASDH(3), AASDHPPT(1), AASS(4), KARS(3) 1348179 11 6 11 6 3 3 2 1 2 0 0.954 0.999 1.000 150 SPRYPATHWAY Four members of the Sprouty protein family block proliferative EGF signals by binding Grb-2, preventing Ras and MAP kinase activation. CBL, EGF, EGFR, GRB2, HRAS, MAP2K1, MAPK1, MAPK3, PTPRB, RAF1, RASA1, SHC1, SOS1, SPRY1, SPRY2, SPRY3, SPRY4, SRC 18 CBL(7), EGF(7), EGFR(24), GRB2(3), HRAS(1), MAP2K1(4), MAPK3(1), PTPRB(9), RAF1(2), RASA1(1), SHC1(2), SOS1(9), SPRY1(1), SPRY2(2), SPRY3(4), SPRY4(2), SRC(2) 4849110 81 45 71 19 13 20 13 21 14 0 0.253 0.999 1.000 151 ARGININECPATHWAY Related catabolic pathways process arginine, histidine, glutamine, and proline through glutamate to alpha-ketoglutamate, which feeds into the citric acid cycle. ALDH4A1, ARG1, GLS, GLUD1, OAT, PRODH 6 ALDH4A1(1), ARG1(1), GLS(1), GLUD1(3), OAT(1) 1081278 7 6 7 4 2 0 3 1 1 0 0.866 1.000 1.000 152 GLYCOLYSISPATHWAY Glycolysis is an evolutionarily conserved pathway by which one glucose molecule is converted to two pyruvate molecules for a gain of 2 ATP. ALDOB, ENO1, GAPD, GPI, HK1, PFKL, PGAM1, PGK1, PKLR, TPI1 9 ALDOB(2), ENO1(1), GPI(3), HK1(3), PFKL(1), PGK1(4), PKLR(4), TPI1(3) 1805871 21 15 20 9 5 8 3 2 3 0 0.802 1.000 1.000 153 CYSTEINE_METABOLISM CARS, CTH, GOT1, GOT2, LDHA, LDHB, LDHC, MPST 8 CARS(1), GOT1(2), GOT2(3), LDHA(3), LDHC(4) 1325088 13 10 13 8 5 2 5 0 1 0 0.942 1.000 1.000 154 IL22BPPATHWAY IL-22 is produced by T cells and induces the acute phase inflammatory response in hepatocytes. IL10RA, IL22, IL22RA1, IL22RA2, JAK1, JAK2, JAK3, SOCS3, STAT1, STAT3, STAT5A, STAT5B, TYK2 13 IL10RA(3), IL22(2), IL22RA2(1), JAK1(5), JAK2(2), JAK3(3), STAT1(2), STAT3(4), STAT5A(2), STAT5B(3), TYK2(2) 3596133 29 26 29 7 2 6 6 9 6 0 0.395 1.000 1.000 155 RANPATHWAY RanGEF (aka RCC1) and RanGFP regulate the GTP- or GDP-bound state of Ran, creating a Ran gradient across the nuclear membrane that is used in nuclear import. CHC1, RAN, RANBP1, RANBP2, RANGAP1 4 RANBP2(16), RANGAP1(2) 1629399 18 12 18 7 5 7 3 1 1 1 0.861 1.000 1.000 156 ST_IL_13_PATHWAY Like IL-4, IL-13 is produced by Th2 cells on activation of the T cell antigen receptor, and by mast and basophil cells on activation of the IgE receptor. IL13, IL13RA1, IL13RA2, IL4R, JAK1, JAK2, TYK2 7 IL13RA2(2), IL4R(5), JAK1(5), JAK2(2), TYK2(2) 2032266 16 15 16 5 1 3 4 5 3 0 0.655 1.000 1.000 157 ST_INTERLEUKIN_13_PATHWAY IL-13 is produced by Th2 cells on activation of the T cell antigen receptor, and by mast and basophil cells on activation of the IgE receptor. IL13, IL13RA1, IL13RA2, IL4R, JAK1, JAK2, TYK2 7 IL13RA2(2), IL4R(5), JAK1(5), JAK2(2), TYK2(2) 2032266 16 15 16 5 1 3 4 5 3 0 0.655 1.000 1.000 158 MITRPATHWAY The MyoD/MEF2 transcription factors induce muscle cell differentiation and are repressed by the transcriptional repressor MITR. CAMK1, CAMK1G, HDAC9, MEF2A, MEF2B, MEF2C, MEF2D, MYOD1, YWHAH 9 CAMK1(2), HDAC9(6), MEF2C(1), MEF2D(1), MYOD1(2) 1567608 12 11 12 7 2 5 2 0 3 0 0.962 1.000 1.000 159 HSA00480_GLUTATHIONE_METABOLISM Genes involved in glutathione metabolism ANPEP, G6PD, GCLC, GCLM, GGT1, GGTL3, GGTL4, GPX1, GPX2, GPX3, GPX4, GPX5, GPX6, GPX7, GSR, GSS, GSTA1, GSTA2, GSTA3, GSTA4, GSTA5, GSTK1, GSTM1, GSTM2, GSTM3, GSTM4, GSTM5, GSTO2, GSTP1, GSTT1, GSTT2, GSTZ1, IDH1, IDH2, MGST1, MGST2, MGST3, OPLAH, TXNDC12 35 ANPEP(3), G6PD(2), GCLC(6), GCLM(1), GGT1(1), GPX1(1), GPX3(1), GPX5(3), GPX6(1), GPX7(2), GSR(1), GSS(2), GSTA1(1), GSTA2(2), GSTA3(2), GSTA5(3), GSTK1(4), GSTM2(1), GSTM3(1), GSTM4(1), GSTM5(2), GSTO2(1), GSTP1(2), IDH1(2), IDH2(2), MGST1(1), MGST3(2), OPLAH(3), TXNDC12(1) 4186179 55 31 55 11 8 16 22 3 5 1 0.0564 1.000 1.000 160 HSA00740_RIBOFLAVIN_METABOLISM Genes involved in riboflavin metabolism ACP1, ACP2, ACP5, ACP6, ACPP, ACPT, ENPP1, ENPP3, FLAD1, LHPP, MTMR1, MTMR2, MTMR6, PHPT1, RFK, TYR 16 ACP1(1), ACP2(1), ACP5(2), ACPP(6), ENPP1(3), ENPP3(5), FLAD1(1), MTMR1(2), MTMR2(1), MTMR6(3), TYR(6) 2925462 31 27 31 9 3 6 12 6 4 0 0.516 1.000 1.000 161 LEPTINPATHWAY Leptin is a peptide secreted by adipose tissue that, in skeletal muscle, promotes fatty acid oxidation, decreases cells' lipid content, and promotes insulin sensitivity. ACACA, CPT1A, LEP, LEPR, PRKAA1, PRKAA2, PRKAB1, PRKAB2, PRKAG1, PRKAG2 10 ACACA(8), CPT1A(5), LEP(2), LEPR(8), PRKAA1(1), PRKAB1(3), PRKAG2(4) 2801235 31 21 31 9 4 16 2 4 5 0 0.768 1.000 1.000 162 SALMONELLAPATHWAY Salmonella induces membrane ruffling in infected cells via bacterial proteins including SipA, SipC, and SopE, which alter actin structure. ACTA1, ACTR2, ACTR3, ARPC1A, ARPC1B, ARPC2, ARPC3, ARPC4, CDC42, RAC1, WASF1, WASL 12 ACTR2(1), ACTR3(1), ARPC1B(1), ARPC2(1), ARPC3(1), CDC42(2), WASF1(4), WASL(4) 1571091 15 12 15 7 1 5 6 1 2 0 0.952 1.000 1.000 163 ACETYLCHOLINE_SYNTHESIS ACHE, CHAT, CHKA, PCYT1A, PDHA1, PDHA2, PEMT, SLC18A3 8 CHAT(2), PCYT1A(2), PDHA1(1), PDHA2(8), SLC18A3(5) 1355790 18 16 18 8 7 2 5 2 2 0 0.730 1.000 1.000 164 PLCDPATHWAY Phospholipase C (PLC-d1) hydrolyzes the membrane lipid PIP2 to DAG and IP3, which induce calcium influx and activates protein kinase C. ADRA1B, PLCD1, PRKCA, PRKCB1, TGM2 4 PLCD1(1), PRKCA(7), TGM2(3) 965823 11 9 11 5 3 3 3 1 1 0 0.810 1.000 1.000 165 N_GLYCAN_BIOSYNTHESIS ALG3, ALG5, B4GALT1, B4GALT2, B4GALT3, B4GALT5, DDOST, DPAGT1, DPM1, FUT8, GCS1, MAN1A1, MAN1B1, MGAT1, MGAT2, MGAT3, MGAT4A, MGAT4B, MGAT5, RPN1, RPN2, ST6GAL1 21 ALG3(3), B4GALT1(1), B4GALT2(2), B4GALT3(1), B4GALT5(3), DPAGT1(1), FUT8(4), MGAT1(1), MGAT3(3), MGAT4A(2), MGAT4B(1), MGAT5(2), RPN2(4) 3866259 28 18 28 6 8 6 7 3 4 0 0.184 1.000 1.000 166 RANKLPATHWAY RANK is a TNF-type receptor that promotes osteoclast differentiation and consequent bone resorbtion on binding RANK ligand produced by osteoblasts. FOS, FOSL1, FOSL2, IFNAR1, IFNAR2, IFNB1, ISGF3G, MAPK8, NFKB1, PRKR, RELA, TNFRSF11A, TNFSF11, TRAF6 12 FOSL1(2), FOSL2(1), IFNAR2(1), IFNB1(3), MAPK8(3), NFKB1(2), TNFRSF11A(4), TNFSF11(1), TRAF6(3) 2152107 20 16 19 7 6 4 4 3 3 0 0.683 1.000 1.000 167 HSA03060_PROTEIN_EXPORT Genes involved in protein export OXA1L, SEC61A2, SRP19, SRP54, SRP68, SRP72, SRP9, SRPR 8 SEC61A2(3), SRP19(1), SRP68(2), SRP72(1), SRPR(4) 1448154 11 6 11 7 3 3 4 0 1 0 0.964 1.000 1.000 168 CARM1PATHWAY The methyltransferase CARM1 interacts with transcription factors such as CBP/p300 and methylates histones H3 and H4. CARM1, CREB1, CREBBP, EP300, NCOA3, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, RARA, RXRA 13 CARM1(3), CREBBP(2), EP300(1), NCOA3(6), PRKACB(2), PRKACG(1), PRKAR1B(4), RARA(2) 4017189 21 16 20 4 2 8 7 2 2 0 0.331 1.000 1.000 169 HSA00791_ATRAZINE_DEGRADATION Genes involved in atrazine degradation ADAR, APOBEC1, APOBEC2, APOBEC3A, APOBEC3B, APOBEC3C, APOBEC3F, APOBEC3G, APOBEC4 9 ADAR(5), APOBEC3B(1), APOBEC3G(2), APOBEC4(1) 1421838 9 9 9 5 2 3 2 0 2 0 0.917 1.000 1.000 170 NUCLEOTIDE_GPCRS ADORA1, ADORA2A, ADORA2B, ADORA3, GPR23, LTB4R, P2RY1, P2RY2, P2RY5, P2RY6 8 ADORA1(1), ADORA3(1), LTB4R(2), P2RY1(5), P2RY6(1) 1143972 10 9 10 9 2 1 5 1 1 0 0.962 1.000 1.000 171 SA_MMP_CYTOKINE_CONNECTION Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. ACE, CD44, CSF1, FCGR3A, IL1B, IL6R, SELL, SPN, TGFB1, TGFB2, TNF, TNFRSF1A, TNFRSF1B, TNFRSF8, TNFSF8 15 ACE(7), CD44(1), CSF1(1), FCGR3A(5), IL6R(5), SELL(1), SPN(2), TGFB1(2), TGFB2(5), TNFRSF1B(1), TNFRSF8(1) 2590707 31 21 31 9 4 3 10 8 6 0 0.507 1.000 1.000 172 PLCPATHWAY Phospholipase C hydrolyzes the membrane lipid PIP2 to DAG, which activates protein kinase C, and IP3, which causes calcium influx. AKT1, PIK3CA, PIK3R1, PLCB1, PLCG1, PRKCA, PRKCB1, VAV1 7 PIK3CA(5), PIK3R1(1), PLCB1(9), PLCG1(4), PRKCA(7), VAV1(1) 2458224 27 24 26 8 5 7 12 1 2 0 0.558 1.000 1.000 173 BLOOD_GROUP_GLYCOLIPID_BIOSYNTHESIS_NEOLACTOSERIES ABO, B3GNT1, FUT1, FUT2, FUT9, GCNT2, ST8SIA1 7 ABO(1), B3GNT1(3), FUT1(2), FUT9(1), GCNT2(1) 1188993 8 8 7 5 3 1 2 1 1 0 0.884 1.000 1.000 174 ALKALOID_BIOSYNTHESIS_II ABP1, AOC2, AOC3, CES1, ESD 5 ABP1(4), AOC2(3), AOC3(2), CES1(1) 1174674 10 9 10 5 2 2 4 1 1 0 0.814 1.000 1.000 175 HSA00053_ASCORBATE_AND_ALDARATE_METABOLISM Genes involved in ascorbate and aldarate metabolism ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, MIOX, UGDH 9 ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2), UGDH(3) 1659714 17 13 17 6 3 5 6 2 1 0 0.588 1.000 1.000 176 HSA00930_CAPROLACTAM_DEGRADATION Genes involved in caprolactam degradation AKR1A1, ASAHL, ECHS1, EHHADH, HADH, HADHA, HSD17B10, HSD17B4, NTAN1, SIRT1, SIRT2, SIRT5, SIRT7, VNN2, VNN3 13 EHHADH(3), HADH(2), HADHA(2), SIRT1(1), SIRT2(1), SIRT7(2), VNN2(2) 2296974 13 7 13 6 0 7 2 0 3 1 0.867 1.000 1.000 177 MITOCHONDRIAPATHWAY Pro-apoptotic signaling induces mitochondria to release cytochrome c, which stimulates Apaf-1 to activate caspase 9. APAF1, BAK1, BAX, BCL2, BCL2L1, BID, BIK, BIRC2, BIRC3, BIRC4, CASP3, CASP6, CASP7, CASP8, CASP9, CYCS, DFFA, DFFB, DIABLO, ENDOG, PDCD8 19 APAF1(4), BAX(1), BCL2(1), BID(1), BIRC2(2), BIRC3(2), CASP3(4), CASP8(3), CASP9(2), DFFA(3) 2644500 23 16 23 7 4 6 5 3 5 0 0.681 1.000 1.000 178 CERAMIDEPATHWAY Ceramide is a lipid signaling molecule that can activate proliferative or apoptotic pathways, depending on signaling context, localization, and cell type. BAD, BAX, BCL2, CASP8, CYCS, FADD, MAP2K1, MAP2K4, MAP3K1, MAPK1, MAPK3, MAPK8, NFKB1, NSMAF, PDCD8, RAF1, RELA, RIPK1, SMPD1, TNFRSF1A, TRADD, TRAF2 21 BAX(1), BCL2(1), CASP8(3), MAP2K1(4), MAP2K4(2), MAP3K1(3), MAPK3(1), MAPK8(3), NFKB1(2), NSMAF(2), RAF1(2), RIPK1(3), SMPD1(1) 3979779 28 20 28 7 6 5 11 2 4 0 0.289 1.000 1.000 179 TRKAPATHWAY Nerve growth factor (NGF) promotes neuronal survival and proliferation by binding its receptor TrkA, which activates PI3K/AKT, Ras, and the MAP kinase pathway. AKT1, DPM2, GRB2, HRAS, KLK2, NGFB, NTRK1, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, SHC1, SOS1 12 GRB2(3), HRAS(1), KLK2(2), NTRK1(6), PIK3CA(5), PIK3R1(1), PLCG1(4), PRKCA(7), SHC1(2), SOS1(9) 3005700 40 29 39 10 6 14 10 7 3 0 0.402 1.000 1.000 180 GSPATHWAY Activated G-protein coupled receptors stimulate cAMP production and thus activate protein kinase A, involved in a number of signal transduction pathways. ADCY1, GNAS, GNB1, GNGT1, PRKACA, PRKAR1A 6 ADCY1(8), GNAS(3), GNB1(1), GNGT1(1) 1263813 13 11 13 7 2 5 4 1 1 0 0.928 1.000 1.000 181 MYOSINPATHWAY Myosin light chain kinase phosphorylates myosin and promotes muscle contraction and platelet formation; myosin phosphatase antagonizes these processes. ARHGAP5, ARHGEF1, GNA12, GNA13, GNAQ, GNB1, GNGT1, MYL2, MYLK, PLCB1, PPP1R12B, PRKCA, PRKCB1, PRKCL1, ROCK1 13 ARHGAP5(4), ARHGEF1(1), GNA12(1), GNA13(1), GNAQ(2), GNB1(1), GNGT1(1), MYL2(2), MYLK(10), PLCB1(9), PPP1R12B(4), PRKCA(7), ROCK1(7) 4016286 50 33 49 11 9 19 13 3 6 0 0.287 1.000 1.000 182 FLUMAZENILPATHWAY Flumazenil is a benzodiazepine receptor antagonist that may induce protective preconditioning in ischemic cardiomyocytes. GABRA1, GABRA2, GABRA3, GABRA4, GABRA5, GABRA6, GPX1, PRKCE, SOD1 9 GABRA1(6), GABRA2(9), GABRA3(6), GABRA4(7), GABRA5(8), GABRA6(6), GPX1(1), PRKCE(1) 1538325 44 31 43 13 6 17 7 9 5 0 0.699 1.000 1.000 183 CASPASEPATHWAY Caspases are cysteine proteases active in apoptosis; caspase-8 and 9 cleave and activate other caspases, while 3, 6, and 7 cleave cellular targets. ADPRT, APAF1, ARHGDIB, BIRC2, BIRC3, BIRC4, CASP1, CASP10, CASP2, CASP3, CASP4, CASP6, CASP7, CASP8, CASP9, CYCS, DFFA, DFFB, GZMB, LMNA, LMNB1, LMNB2, PRF1 21 APAF1(4), BIRC2(2), BIRC3(2), CASP1(2), CASP10(3), CASP2(2), CASP3(4), CASP4(1), CASP8(3), CASP9(2), DFFA(3), GZMB(3), LMNB1(1), LMNB2(1), PRF1(4) 3763962 37 21 37 9 6 12 8 6 5 0 0.453 1.000 1.000 184 ST_JAK_STAT_PATHWAY The Janus kinase-signal transducer and activator of transcription (JAK-STAT) pathway transduces extracellular signals to promote gene activation. CISH, JAK1, JAK2, JAK3, PIAS1, PIAS3, PTPRU, REG1A, SOAT1 9 JAK1(5), JAK2(2), JAK3(3), PIAS3(4), PTPRU(6), REG1A(5), SOAT1(3) 2708871 28 18 28 9 4 9 6 4 4 1 0.667 1.000 1.000 185 N_GLYCAN_DEGRADATION AGA, FLJ21865, FUCA1, FUCA2, GLB1, HEXA, HEXB, LCT, MAN2C1, MANBA, NEU1, NEU2, NEU3, NEU4 13 AGA(1), FUCA1(1), FUCA2(1), HEXA(1), LCT(12), MAN2C1(3), MANBA(4), NEU3(1), NEU4(5) 3233256 29 25 29 8 4 10 10 2 3 0 0.504 1.000 1.000 186 HSA00601_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTOSERIES Genes involved in glycosphingolipid biosynthesis - lactoseries ABO, B3GALT1, B3GALT2, B3GALT5, B3GNT5, FUT1, FUT2, FUT3, ST3GAL3, ST3GAL4 10 ABO(1), B3GALT1(1), B3GALT2(1), B3GNT5(1), FUT1(2), FUT3(1), ST3GAL3(1), ST3GAL4(1) 1392684 9 7 9 4 4 2 2 1 0 0 0.737 1.000 1.000 187 AHSPPATHWAY Alpha-hemoglobin stabilizing protein (AHSP) prevents precitipation of hemoglobin alpha-subunits. ALAD, ALAS1, ALAS2, CPO, ERAF, FECH, GATA1, HBA1, HBA2, HBB, HMBS, UROD, UROS 12 ALAD(2), ALAS1(3), CPO(1), HBB(2), HMBS(2) 1533939 10 6 10 5 3 5 0 1 1 0 0.866 1.000 1.000 188 HCMVPATHWAY Cytomegalovirus activates MAP kinase pathways in the host cell, inducing transcription of viral genes. AKT1, CREB1, MAP2K1, MAP2K2, MAP2K3, MAP2K6, MAP3K1, MAPK1, MAPK14, MAPK3, NFKB1, PIK3CA, PIK3R1, RB1, RELA, SP1 16 MAP2K1(4), MAP2K3(3), MAP3K1(3), MAPK14(1), MAPK3(1), NFKB1(2), PIK3CA(5), PIK3R1(1), RB1(5) 3757512 25 22 24 6 2 6 5 4 8 0 0.516 1.000 1.000 189 KERATAN_SULFATE_BIOSYNTHESIS B3GNT1, B4GALT1, B4GALT2, B4GALT3, B4GALT5, FUT8, SIAT4A, SIAT4B, SIAT6, ST3GAL1, ST3GAL2, ST3GAL3, ST3GAL4 10 B3GNT1(3), B4GALT1(1), B4GALT2(2), B4GALT3(1), B4GALT5(3), FUT8(4), ST3GAL1(2), ST3GAL2(2), ST3GAL3(1), ST3GAL4(1) 1529037 20 14 19 7 7 1 8 2 2 0 0.491 1.000 1.000 190 LIMONENE_AND_PINENE_DEGRADATION ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, ECHS1, EHHADH, HADHA, SDS 12 ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH9A1(2), EHHADH(3), HADHA(2) 2354379 25 16 25 9 4 11 6 2 1 1 0.650 1.000 1.000 191 FREEPATHWAY Neutrophils release superoxide to induce lysis in invading bacteria; in neighboring endothelial cells, superoxide dismutase scavenges radicals but produces pro-apoptotic peroxides. GPX1, GSR, GSS, IL8, NFKB1, NOX1, RELA, SOD1, TNF, XDH 10 GPX1(1), GSR(1), GSS(2), NFKB1(2), NOX1(1), XDH(8) 1929969 15 11 15 5 2 6 5 1 1 0 0.601 1.000 1.000 192 AMINOSUGARS_METABOLISM CMAS, CYB5R3, GCK, GFPT1, GNE, GNPDA1, GNPDA2, HEXA, HEXB, HK1, HK2, HK3, PGM3, RENBP, UAP1 15 CMAS(2), GCK(1), GFPT1(3), GNPDA1(1), GNPDA2(1), HEXA(1), HK1(3), HK2(5), HK3(5), PGM3(2), RENBP(3), UAP1(5) 3272472 32 16 32 9 11 8 5 4 4 0 0.454 1.000 1.000 193 WNTPATHWAY The Wnt glycoprotein binds to membrane-bound receptors such as Frizzled to activate a number of signaling pathways, including that of beta-catenin. APC, AXIN1, BTRC, CCND1, CREBBP, CSNK1A1, CSNK1D, CSNK2A1, CTBP1, CTNNB1, DVL1, FRAT1, FZD1, GSK3B, HDAC1, MADH4, MAP3K7, MAP3K7IP1, MYC, NLK, PPARD, PPP2CA, TCF1, TLE1, WIF1, WNT1 22 APC(6), AXIN1(2), BTRC(5), CCND1(2), CREBBP(2), CSNK1A1(1), CSNK1D(1), CTNNB1(9), FZD1(2), GSK3B(1), HDAC1(1), MAP3K7(3), PPARD(1), TLE1(3), WNT1(3) 5738565 42 26 40 8 11 9 10 6 6 0 0.100 1.000 1.000 194 PELP1PATHWAY Pelp1 acts downstream of activated estrogen receptor to promote cell proliferation and is overexpressed in many breast tumors. CREBBP, EP300, ESR1, MAPK1, MAPK3, PELP1, SRC 7 CREBBP(2), EP300(1), MAPK3(1), PELP1(2), SRC(2) 2849223 8 6 8 1 3 1 3 0 1 0 0.257 1.000 1.000 195 GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM ACO1, ACO2, CS, GRHPR, HAO1, HAO2, HYI, MDH1, MDH2, MTHFD1, MTHFD1L, MTHFD2 12 ACO1(2), ACO2(1), CS(1), GRHPR(1), HAO1(2), HAO2(5), MDH1(1), MTHFD1(1), MTHFD1L(4) 2472285 18 12 18 7 5 5 3 2 3 0 0.763 1.000 1.000 196 MTA3PATHWAY The estrogen receptor regulates proliferation in mammary epithelia via MTA3 activation; loss of either protein is implicated in breast cancer. ALDOA, CTSD, ESR1, GAPD, GREB1, HSPB1, HSPB2, MTA1, MTA3, PDZK1, TUBA1, TUBA2, TUBA3, TUBA4, TUBA6, TUBA8 10 ALDOA(1), CTSD(1), GREB1(9), HSPB2(1), MTA3(2), PDZK1(1) 2131467 15 10 15 5 5 4 4 2 0 0 0.548 1.000 1.000 197 HSA00511_N_GLYCAN_DEGRADATION Genes involved in N-glycan degradation AGA, FLJ21865, FUCA1, FUCA2, GLB1, HEXA, HEXB, LCT, MAN2B1, MAN2B2, MAN2C1, MANBA, NEU1, NEU2, NEU3, NEU4 15 AGA(1), FUCA1(1), FUCA2(1), HEXA(1), LCT(12), MAN2B1(1), MAN2B2(3), MAN2C1(3), MANBA(4), NEU3(1), NEU4(5) 3983004 33 28 33 9 5 12 10 3 3 0 0.445 1.000 1.000 198 GLYCOSAMINOGLYCAN_DEGRADATION ARSB, GALNS, GLB1, GNS, GUSB, HEXA, HEXB, IDS, IDUA, LCT, NAGLU 11 ARSB(1), GUSB(2), HEXA(1), IDS(2), IDUA(1), LCT(12), NAGLU(1) 2774274 20 17 20 6 3 6 4 3 4 0 0.548 1.000 1.000 199 KREBPATHWAY The Krebs (citric acid) cycle takes place in mitochondria, where it extracts energy in the form of electron carriers NADH and FADH2, which drive the electron transport chain. ACO2, CS, FH, IDH2, MDH1, OGDH, SDHA, SUCLA2 8 ACO2(1), CS(1), FH(1), IDH2(2), MDH1(1), SDHA(5) 1811934 11 7 11 9 4 2 3 1 1 0 0.964 1.000 1.000 200 HYPERTROPHY_MODEL ADAM10, ANKRD1, ATF3, CYR61, DUSP14, EIF4E, EIF4EBP1, GDF8, HBEGF, IFNG, IFRD1, IL18, IL1A, IL1R1, JUND, MYOG, NR4A3, TCF8, VEGF, WDR1 17 ADAM10(5), ANKRD1(3), EIF4E(2), IFNG(3), IL1A(2), NR4A3(1) 2124114 16 9 16 5 4 6 3 1 2 0 0.605 1.000 1.000 201 HSA00630_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM Genes involved in glyoxylate and dicarboxylate metabolism ACO1, ACO2, AFMID, CS, GRHPR, HAO1, HAO2, HYI, LOC441996, MDH1, MDH2, MTHFD1, MTHFD1L, MTHFD2 13 ACO1(2), ACO2(1), AFMID(1), CS(1), GRHPR(1), HAO1(2), HAO2(5), MDH1(1), MTHFD1(1), MTHFD1L(4) 2590707 19 12 19 9 5 6 3 2 3 0 0.891 1.000 1.000 202 GABAPATHWAY Gamma-aminobutyric acid (GABA) is an inhibitory neurotransmitter whose receptor is regulated by Plic-1, gephyrin, and GABARAP, which promote receptor clustering. DNM1, GABARAP, GABRA1, GABRA2, GABRA3, GABRA4, GABRA5, GABRA6, GPHN, NSF, SRC, UBQLN1 12 DNM1(1), GABRA1(6), GABRA2(9), GABRA3(6), GABRA4(7), GABRA5(8), GABRA6(6), GPHN(2), NSF(1), SRC(2), UBQLN1(3) 2315034 51 31 50 15 10 16 9 9 7 0 0.655 1.000 1.000 203 ST_ADRENERGIC Adrenergic receptors respond to epinephrine and norepinephrine signaling. AKT1, APC, AR, ASAH1, BF, BRAF, CAMP, CCL13, CCL15, CCL16, DAG1, EGFR, GAS, GNA11, GNA15, GNAI1, GNAQ, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, KCNJ3, KCNJ5, KCNJ9, MAPK1, MAPK10, MAPK14, PHKA2, PIK3CA, PIK3CD, PIK3R1, PITX2, PTX1, PTX3, RAF1, SRC 34 APC(6), AR(2), ASAH1(2), BRAF(13), CCL15(3), DAG1(2), EGFR(24), GNAI1(1), GNAQ(2), ITPKA(1), ITPKB(4), ITPR1(7), ITPR2(15), ITPR3(4), KCNJ3(10), MAPK10(1), MAPK14(1), PHKA2(6), PIK3CA(5), PIK3R1(1), PITX2(3), PTX3(2), RAF1(2), SRC(2) 10418943 119 64 103 27 20 31 29 19 20 0 0.130 1.000 1.000 204 HSA00626_NAPHTHALENE_AND_ANTHRACENE_DEGRADATION Genes involved in naphthalene and anthracene degradation CARM1, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, HEMK1, LCMT1, LCMT2, METTL2B, METTL6, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, WBSCR22 18 CARM1(3), DHRS2(2), DHRS3(1), LCMT1(1), LCMT2(4), METTL2B(3), METTL6(1), PRMT2(1), PRMT3(1), PRMT5(1), PRMT6(2), PRMT7(3), PRMT8(5), WBSCR22(1) 2917980 29 20 28 9 7 5 13 2 2 0 0.452 1.000 1.000 205 HSA00592_ALPHA_LINOLENIC_ACID_METABOLISM Genes involved in alpha-Linolenic acid metabolism ACOX1, ACOX3, FADS2, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6 15 ACOX1(2), ACOX3(4), PLA2G10(1), PLA2G12B(1), PLA2G1B(1), PLA2G2A(3), PLA2G2E(1), PLA2G2F(1), PLA2G3(4), PLA2G4A(5), PLA2G6(1) 1974861 24 14 24 9 8 5 5 4 2 0 0.763 1.000 1.000 206 ARAPPATHWAY ADP-ribosylation factors (ARFs), members of the Ras superfamily, regulate eukaryotic vesicular trafficking and activate phospholipase D's. ARF1, ARFGAP1, ARFGAP3, ARFGEF2, BIG1, CENTD1, CENTD2, CLTA, CLTB, COP, COPA, DDEF1, DDEF2, GBF1, GPLD1, KDELR1, KDELR2, KDELR3, PSCD1, PSCD2, PSCD3, PSCD4 12 ARFGAP1(1), ARFGAP3(1), ARFGEF2(5), CLTB(1), COPA(4), GBF1(7), GPLD1(1), KDELR1(1), KDELR2(1), KDELR3(2) 3115092 24 13 24 7 3 12 3 3 3 0 0.634 1.000 1.000 207 HSA00960_ALKALOID_BIOSYNTHESIS_II Genes involved in alkaloid biosynthesis II AADAC, ABP1, AOC2, AOC3, ARD1A, CES1, CES7, DDHD1, ESCO1, ESCO2, LIPA, LYCAT, MYST3, MYST4, NAT5, NAT6, PLA1A, PNPLA3, PPME1, PRDX6, SH3GLB1 18 ABP1(4), AOC2(3), AOC3(2), CES1(1), CES7(3), DDHD1(3), ESCO1(5), ESCO2(2), LIPA(1), MYST3(7), MYST4(6), PLA1A(4), PNPLA3(1), PPME1(2), PRDX6(1), SH3GLB1(1) 4906257 46 28 46 11 9 15 8 8 6 0 0.302 1.000 1.000 208 PYRUVATE_METABOLISM ACACA, ACAS2, ACAS2L, ACAT1, ACAT2, ACYP1, ACYP2, ADH5, AKR1B1, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, CACH_1, DLAT, DLD, GLO1, GRHPR, HAGH, HAGHL, LDHA, LDHB, LDHC, LDHD, MDH1, MDH2, ME1, ME2, ME3, PC, PCK1, PDHA1, PDHA2, PDHB, PKLR, PKM2 37 ACACA(8), ACAT1(1), ACYP2(1), ADH5(3), AKR1B1(1), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH9A1(2), DLAT(3), DLD(3), GLO1(1), GRHPR(1), HAGHL(1), LDHA(3), LDHC(4), MDH1(1), ME1(1), ME2(6), ME3(2), PC(1), PCK1(8), PDHA1(1), PDHA2(8), PKLR(4), PKM2(2) 7180914 84 43 83 19 20 26 21 8 9 0 0.102 1.000 1.000 209 CACAMPATHWAY Calcium functions as a second messenger activating the calcium/calmodulin-dependent kinases, which phosphorylate targets such as CREB. CALM1, CALM2, CALM3, CAMK1, CAMK1G, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CAMK4, CAMKK1, CAMKK2, CREB1, SYT1 14 CALM1(1), CAMK1(2), CAMK2A(1), CAMK2D(1), CAMK2G(2), CAMK4(4), CAMKK1(2), CAMKK2(1), SYT1(3) 2252856 17 14 17 6 2 9 1 3 2 0 0.744 1.000 1.000 210 P35ALZHEIMERSPATHWAY p35, a neuron-specific activator of cyclin-dependent kinase 5, is cleaved to p25 in Alzheimer's disease and promotoes hyperphosphorylated tau formation and apoptosis. APP, CAPN1, CAPNS1, CAPNS2, CDK5, CDK5R1, CSNK1A1, CSNK1D, GSK3B, MAPT, PPP2CA 11 APP(3), CDK5(1), CSNK1A1(1), CSNK1D(1), GSK3B(1), MAPT(2) 1846248 9 7 9 9 1 4 1 2 1 0 0.996 1.000 1.000 211 PAR1PATHWAY Activated extracellular thrombin cleaves and activates the G-protein coupled receptors PAR1 and PAR4, which activate platelets. ADCY1, ARHA, ARHGEF1, F2, F2R, F2RL3, GNA12, GNA13, GNAI1, GNAQ, GNB1, GNGT1, MAP3K7, PIK3CA, PIK3R1, PLCB1, PPP1R12B, PRKCA, PRKCB1, PTK2B, ROCK1 19 ADCY1(8), ARHGEF1(1), F2(5), F2R(2), F2RL3(2), GNA12(1), GNA13(1), GNAI1(1), GNAQ(2), GNB1(1), GNGT1(1), MAP3K7(3), PIK3CA(5), PIK3R1(1), PLCB1(9), PPP1R12B(4), PRKCA(7), PTK2B(6), ROCK1(7) 5043255 67 41 66 15 13 22 19 5 8 0 0.179 1.000 1.000 212 DCPATHWAY Dendritic cells internalize and present antigen, after which they migrate to lymphocyte-rich tissues and induce T and B cell differentiation. ANPEP, CD2, CD33, CD5, CD7, CSF2, IFNA1, IFNB1, IFNG, IL10, IL12A, IL12B, IL13, IL3, IL4, IL5, ITGAX, TLR2, TLR4, TLR7, TLR9, TNFRSF5 21 ANPEP(3), CD2(2), CD33(4), CD5(4), IFNB1(3), IFNG(3), IL12A(2), IL3(1), ITGAX(11), TLR4(23), TLR7(6), TLR9(5) 3598584 67 40 67 18 6 23 16 11 11 0 0.349 1.000 1.000 213 TGFBPATHWAY The TGF-beta receptor responds to ligand binding by activating the SMAD family of transcriptional regulations, commonly blocking cell growth. APC, CDH1, CREBBP, EP300, MADH2, MADH3, MADH4, MADH7, MADHIP, MAP2K1, MAP3K7, MAP3K7IP1, MAPK3, SKIL, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2 13 APC(6), CDH1(4), CREBBP(2), EP300(1), MAP2K1(4), MAP3K7(3), MAPK3(1), SKIL(4), TGFB1(2), TGFB2(5), TGFB3(1), TGFBR1(2) 4951536 35 24 35 8 2 9 6 9 9 0 0.442 1.000 1.000 214 PROTEASOME PSMA1, PSMA2, PSMA3, PSMA4, PSMA5, PSMA6, PSMA7, PSMB1, PSMB10, PSMB2, PSMB3, PSMB4, PSMB5, PSMB6, PSMB7, PSMB8, PSMB9 17 PSMA3(1), PSMA6(1), PSMB4(3), PSMB9(1) 1690287 6 3 6 6 2 1 1 1 1 0 0.969 1.000 1.000 215 HSA00720_REDUCTIVE_CARBOXYLATE_CYCLE Genes involved in reductive carboxylate cycle (CO2 fixation) ACLY, ACO1, ACO2, ACSS1, ACSS2, FH, IDH1, IDH2, LOC441996, MDH1, MDH2, SUCLA2 11 ACLY(1), ACO1(2), ACO2(1), ACSS1(1), ACSS2(3), FH(1), IDH1(2), IDH2(2), MDH1(1) 2566455 14 10 14 6 4 3 3 2 2 0 0.765 1.000 1.000 216 EIF2PATHWAY Eukaryotic initiation factor 2 (EIF2) initiates translation by transferring Met-tRNA to the 40S ribosome in a GTP-dependent process. EIF2AK3, EIF2AK4, EIF2B5, EIF2S1, EIF2S2, EIF2S3, EIF5, GSK3B, HRI, PPP1CA, PRKR 9 EIF2AK3(5), EIF2AK4(4), EIF2B5(3), EIF2S3(1), GSK3B(1), PPP1CA(1) 2251566 15 8 15 5 4 7 2 1 1 0 0.757 1.000 1.000 217 PROTEASOMEPATHWAY Ubiquitinated proteins are targeted for proteolytic degradation by the proteasome, where they are unfolded and degraded to small peptides in an ATP-dependent process. PSMA1, PSMA2, PSMA3, PSMA4, PSMA5, PSMA6, PSMA7, PSMB1, PSMB2, PSMB3, PSMB4, PSMB5, PSMB6, PSMB7, PSMC3, PSMD14, RPN1, RPN2, UBE1, UBE2A, UBE3A 20 PSMA3(1), PSMA6(1), PSMB4(3), PSMD14(1), RPN2(4), UBE2A(2), UBE3A(2) 2507631 14 9 14 5 3 2 3 3 3 0 0.645 1.000 1.000 218 HSA00770_PANTOTHENATE_AND_COA_BIOSYNTHESIS Genes involved in pantothenate and CoA biosynthesis BCAT1, BCAT2, COASY, DPYD, DPYS, ENPP1, ENPP3, ILVBL, PANK1, PANK2, PANK3, PANK4, PPCDC, PPCS, UPB1, VNN1 16 COASY(3), DPYD(10), DPYS(6), ENPP1(3), ENPP3(5), PANK1(2), PANK2(4), PANK3(2), PANK4(1), PPCS(1), VNN1(1) 3346518 38 26 38 10 4 13 13 3 4 1 0.391 1.000 1.000 219 HSA00642_ETHYLBENZENE_DEGRADATION Genes involved in ethylbenzene degradation ARD1A, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, ESCO1, ESCO2, LYCAT, MYST3, MYST4, NAT5, NAT6, PNPLA3, SH3GLB1 12 DHRS2(2), DHRS3(1), ESCO1(5), ESCO2(2), MYST3(7), MYST4(6), PNPLA3(1), SH3GLB1(1) 3209907 25 15 25 9 5 10 2 4 4 0 0.769 1.000 1.000 220 CHOLESTEROL_BIOSYNTHESIS C10orf110, CYP51A1, DHCR7, FDFT1, FDPS, FDPS, LOC402397, HMGCR, HMGCS1, IDI1, LSS, MVD, MVK, NSDHL, PMVK, SC4MOL, SC5DL, SQLE 15 CYP51A1(3), DHCR7(1), FDFT1(1), FDPS(1), HMGCR(3), HMGCS1(2), IDI1(1), LSS(3), MVD(1), NSDHL(1), SC4MOL(1), SC5DL(2) 2572002 20 16 20 7 2 7 7 3 1 0 0.743 1.000 1.000 221 AKAPCENTROSOMEPATHWAY Protein Kinase A at the Centrosome AKAP9, ARHA, CDC2, MAP2, PCNT1, PCNT2, PPP1CA, PPP2CA, PRKACB, PRKACG, PRKAG1, PRKAR2A, PRKAR2B, PRKCE, PRKCL1 10 AKAP9(16), MAP2(12), PPP1CA(1), PRKACB(2), PRKACG(1), PRKCE(1) 3525828 33 24 33 10 2 18 7 3 3 0 0.837 1.000 1.000 222 SELENOAMINO_ACID_METABOLISM AHCY, CBS, CTH, GGT1, MARS, MARS2, MAT1A, MAT2B, PAPSS1, PAPSS2, SCLY, SEPHS1 12 AHCY(2), CBS(1), GGT1(1), MARS(1), MARS2(4), MAT1A(2), MAT2B(3), PAPSS1(2), PAPSS2(1), SCLY(2), SEPHS1(3) 2393079 22 12 22 8 9 6 5 0 2 0 0.555 1.000 1.000 223 GSK3PATHWAY Bacterial lipopolysaccharide activates AKT to promote the survival and activation of macrophages and inhibits Gsk3-beta to promote beta-catenin accumulation in the nucleus. AKT1, APC, AXIN1, CCND1, CD14, CTNNB1, DVL1, FZD1, GJA1, GNAI1, GSK3B, IRAK1, LBP, LEF1, LY96, MYD88, NFKB1, PDPK1, PIK3CA, PIK3R1, PPP2CA, PRKR, RELA, TIRAP, TLR4, TOLLIP, WNT1 26 APC(6), AXIN1(2), CCND1(2), CD14(1), CTNNB1(9), FZD1(2), GJA1(2), GNAI1(1), GSK3B(1), IRAK1(2), LBP(2), LEF1(6), LY96(1), MYD88(2), NFKB1(2), PIK3CA(5), PIK3R1(1), TLR4(23), WNT1(3) 5959800 73 43 71 16 12 18 24 11 8 0 0.146 1.000 1.000 224 STREPTOMYCIN_BIOSYNTHESIS GCK, HK1, HK2, HK3, IMPA1, PGM1, PGM3, TGDS 8 GCK(1), HK1(3), HK2(5), HK3(5), IMPA1(1), PGM1(2), PGM3(2), TGDS(2) 1990986 21 10 21 9 8 6 5 1 1 0 0.768 1.000 1.000 225 HSA03010_RIBOSOME Genes involved in ribosome C15orf15, FAU, hCG_1644323, hCG_1984468, hCG_2041321, hCG_21078, hCG_26523, LOC283412, LOC284064, LOC284230, LOC284288, LOC284393, LOC285053, LOC342994, LOC347292, LOC388720, LOC389342, LOC390876, LOC391656, LOC400652, LOC402057, LOC439992, LOC440055, LOC440589, LOC440733, LOC440737, LOC441377, LOC441876, LOC441907, MRPL13, MRPS7, RPL10A, RPL10L, RPL11, RPL12, RPL13, RPL13A, RPL14, RPL18, RPL18A, RPL19, RPL21, RPL22L1, RPL23A, RPL23AP2, RPL24, RPL26, RPL27, RPL27A, RPL28, RPL29, RPL3, RPL30, RPL31, RPL32, RPL34, RPL35, RPL35A, RPL36A, RPL36AL, RPL37, RPL37A, RPL38, RPL39, RPL3L, RPL41, RPL6, RPL7, RPL8, RPL9, RPS10, RPS11, RPS12, RPS13, RPS15A, RPS16, RPS18, RPS2, RPS20, RPS21, RPS23, RPS24, RPS25, RPS26, RPS26P10, RPS27, RPS28, RPS29, RPS3, RPS3A, RPS4Y1, RPS5, RPS6, RPS7, RPS8, RPS9, RPSA, tcag7.23 67 MRPS7(2), RPL10L(2), RPL11(1), RPL12(1), RPL14(1), RPL19(2), RPL21(1), RPL23A(2), RPL29(1), RPL30(2), RPL35(1), RPL36A(1), RPL37(1), RPL3L(1), RPL6(1), RPL8(1), RPS10(1), RPS12(1), RPS13(2), RPS26(1), RPS29(1), RPS4Y1(1) 4487523 28 17 28 7 9 7 5 3 4 0 0.383 1.000 1.000 226 CCR3PATHWAY CCR3 is a G-protein coupled receptor that recruits eosinophils to inflammation sites via chemokine ligands. ARHA, CCL11, CCR3, CFL1, GNAQ, GNAS, GNB1, GNGT1, HRAS, LIMK1, MAP2K1, MAPK1, MAPK3, MYL2, NOX1, PIK3C2G, PLCB1, PPP1R12B, PRKCA, PRKCB1, PTK2, RAF1, ROCK2 21 CCR3(1), GNAQ(2), GNAS(3), GNB1(1), GNGT1(1), HRAS(1), MAP2K1(4), MAPK3(1), MYL2(2), NOX1(1), PIK3C2G(3), PLCB1(9), PPP1R12B(4), PRKCA(7), PTK2(7), RAF1(2), ROCK2(3) 4938894 52 33 52 11 10 18 12 6 6 0 0.287 1.000 1.000 227 ST_GRANULE_CELL_SURVIVAL_PATHWAY The survival and differentiation of granule cells in the brain is controlled by pro-growth PACAP and pro-apoptotic ceramides. ADPRT, APC, ASAH1, CAMP, CASP3, CERK, CREB1, CREB3, CREB5, CXCL2, DAG1, EPHB2, FOS, GNAQ, IL8RB, ITPKA, ITPKB, JUN, MAP2K4, MAP2K7, MAPK1, MAPK10, MAPK8, MAPK8IP1, MAPK8IP2, MAPK8IP3, MAPK9, PACAP 25 APC(6), ASAH1(2), CASP3(4), CERK(3), CREB5(4), DAG1(2), EPHB2(4), GNAQ(2), ITPKA(1), ITPKB(4), MAP2K4(2), MAP2K7(1), MAPK10(1), MAPK8(3), MAPK8IP1(3), MAPK8IP3(1), MAPK9(5) 5553837 48 30 48 11 12 11 12 6 7 0 0.186 1.000 1.000 228 IGF1RPATHWAY Insulin-like growth factor receptor IGF-1R promotes cell growth and inhibits apoptosis on binding of ligands IGF-1 and 2 via Ras activation and the AKT pathway. AKT1, BAD, GRB2, HRAS, IGF1R, IRS1, MAP2K1, MAPK1, MAPK3, PIK3CA, PIK3R1, RAF1, SHC1, SOS1, YWHAH 15 GRB2(3), HRAS(1), IGF1R(6), IRS1(12), MAP2K1(4), MAPK3(1), PIK3CA(5), PIK3R1(1), RAF1(2), SHC1(2), SOS1(9) 3643734 46 25 45 12 11 14 8 10 3 0 0.319 1.000 1.000 229 HSA05050_DENTATORUBROPALLIDOLUYSIAN_ATROPHY Genes involved in dentatorubropallidoluysian atrophy (DRPLA) ATN1, BAIAP2, CASP1, CASP3, CASP7, CASP8, GAPDH, INS, INSR, ITCH, MAGI1, MAGI2, RERE, WWP1, WWP2 15 ATN1(2), BAIAP2(2), CASP1(2), CASP3(4), CASP8(3), GAPDH(2), INSR(1), ITCH(3), MAGI1(10), MAGI2(9), RERE(7), WWP1(2), WWP2(2) 4665672 49 25 49 12 15 14 9 5 6 0 0.224 1.000 1.000 230 DREAMPATHWAY The transcription factor DREAM blocks expression of the prodynorphin gene, which encodes the ligand of an opioid receptor that blocks pain signaling. CREB1, CREM, CSEN, FOS, JUN, MAPK3, OPRK1, POLR2A, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B 13 CREM(1), MAPK3(1), OPRK1(2), POLR2A(6), PRKACB(2), PRKACG(1), PRKAR1B(4) 2483121 17 14 17 6 3 6 6 1 1 0 0.634 1.000 1.000 231 EGFPATHWAY The epidermal growth factor (EGF) peptide stimulates the EGF receptor to promote cell proliferation via the MAP kinase and Ras pathways. CSNK2A1, EGF, EGFR, ELK1, FOS, GRB2, HRAS, JAK1, JUN, MAP2K1, MAP2K4, MAP3K1, MAPK3, MAPK8, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, RAF1, RASA1, SHC1, SOS1, SRF, STAT1, STAT3, STAT5A 26 EGF(7), EGFR(24), GRB2(3), HRAS(1), JAK1(5), MAP2K1(4), MAP2K4(2), MAP3K1(3), MAPK3(1), MAPK8(3), PIK3CA(5), PIK3R1(1), PLCG1(4), PRKCA(7), RAF1(2), RASA1(1), SHC1(2), SOS1(9), STAT1(2), STAT3(4), STAT5A(2) 7241286 92 56 81 22 14 18 22 23 15 0 0.239 1.000 1.000 232 ST_JNK_MAPK_PATHWAY JNKs are MAP kinases regulated by several levels of kinases (MAPKK, MAPKKK) and phosphorylate transcription factors and regulatory proteins. AKT1, ATF2, CDC42, DLD, DUSP10, DUSP4, DUSP8, GAB1, GADD45A, GCK, IL1R1, JUN, MAP2K4, MAP2K5, MAP2K7, MAP3K1, MAP3K10, MAP3K11, MAP3K12, MAP3K13, MAP3K2, MAP3K3, MAP3K4, MAP3K5, MAP3K7, MAP3K7IP1, MAP3K7IP2, MAP3K9, MAPK10, MAPK7, MAPK8, MAPK9, MYEF2, NFATC3, NR2C2, PAPPA, SHC1, TP53, TRAF6, ZAK 38 ATF2(2), CDC42(2), DLD(3), DUSP10(6), GAB1(2), GADD45A(1), GCK(1), MAP2K4(2), MAP2K7(1), MAP3K1(3), MAP3K10(1), MAP3K11(6), MAP3K12(4), MAP3K13(6), MAP3K2(4), MAP3K3(2), MAP3K4(8), MAP3K5(8), MAP3K7(3), MAP3K9(5), MAPK10(1), MAPK7(4), MAPK8(3), MAPK9(5), MYEF2(3), NFATC3(7), NR2C2(1), PAPPA(6), SHC1(2), TP53(65), TRAF6(3), ZAK(1) 9737565 171 83 160 31 36 35 46 23 31 0 0.00450 1.000 1.000 233 HSA00641_3_CHLOROACRYLIC_ACID_DEGRADATION Genes involved in 3-chloroacrylic acid degradation ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1 15 ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH5(3), ADH6(4), ADH7(3), ADHFE1(2), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2) 2582451 43 22 43 14 5 27 5 3 3 0 0.661 1.000 1.000 234 HSA00521_STREPTOMYCIN_BIOSYNTHESIS Genes involved in streptomycin biosynthesis GCK, HK1, HK2, HK3, IMPA1, IMPA2, ISYNA1, PGM1, PGM3, TGDS 10 GCK(1), HK1(3), HK2(5), HK3(5), IMPA1(1), IMPA2(1), ISYNA1(2), PGM1(2), PGM3(2), TGDS(2) 2269239 24 12 24 9 10 6 5 2 1 0 0.611 1.000 1.000 235 SPPAPATHWAY Thrombin cleaves protease-activated receptors PAR1 and PAR4 to induce calcium influx and activate platelet aggregation, a process inhibited by aspirin. F2, F2R, F2RL3, GNAI1, GNB1, GNGT1, HRAS, ITGA1, ITGB1, MAP2K1, MAPK1, MAPK3, PLA2G4A, PLCB1, PRKCA, PRKCB1, PTGS1, PTK2, RAF1, SRC, SYK, TBXAS1 21 F2(5), F2R(2), F2RL3(2), GNAI1(1), GNB1(1), GNGT1(1), HRAS(1), ITGA1(5), ITGB1(2), MAP2K1(4), MAPK3(1), PLA2G4A(5), PLCB1(9), PRKCA(7), PTGS1(3), PTK2(7), RAF1(2), SRC(2), SYK(1), TBXAS1(4) 4719336 65 37 65 17 12 19 13 11 10 0 0.473 1.000 1.000 236 PITX2PATHWAY The bicoid-related transcription factor Pitx2 is activated by Wnt binding to the Frizzled receptor and induces tissue-specific cell proliferation. APC, AXIN1, CREBBP, CTNNB1, DVL1, EP300, FZD1, GSK3B, HDAC1, HTATIP, LDB1, LEF1, PITX2, PPARBP, TRRAP, WNT1 14 APC(6), AXIN1(2), CREBBP(2), CTNNB1(9), EP300(1), FZD1(2), GSK3B(1), HDAC1(1), LDB1(1), LEF1(6), PITX2(3), TRRAP(14), WNT1(3) 6438003 51 27 50 10 13 11 14 7 6 0 0.0796 1.000 1.000 237 AT1RPATHWAY Binding of angiotensin II to AT1-R activates Ca2+ signaling and the JNK pathway. AGT, AGTR1, ATF2, CALM1, CALM2, CALM3, EGFR, ELK1, GNAQ, GRB2, HRAS, JUN, MAP2K1, MAP2K2, MAP2K4, MAP3K1, MAPK1, MAPK3, MAPK8, MEF2A, MEF2B, MEF2C, MEF2D, PAK1, PRKCA, PRKCB1, PTK2, PTK2B, RAC1, RAF1, SHC1, SOS1, SRC, SYT1 33 AGTR1(1), ATF2(2), CALM1(1), EGFR(24), GNAQ(2), GRB2(3), HRAS(1), MAP2K1(4), MAP2K4(2), MAP3K1(3), MAPK3(1), MAPK8(3), MEF2C(1), MEF2D(1), PAK1(5), PRKCA(7), PTK2(7), PTK2B(6), RAF1(2), SHC1(2), SOS1(9), SRC(2), SYT1(3) 6517209 92 49 82 25 20 27 13 18 14 0 0.398 1.000 1.000 238 NICOTINATE_AND_NICOTINAMIDE_METABOLISM AOX1, CD38, ENPP1, ENPP3, NADSYN1, NMNAT1, NMNAT2, NNMT, NNT, NP, NT5C, NT5E, NT5M, QPRT 13 AOX1(6), CD38(1), ENPP1(3), ENPP3(5), NMNAT1(1), NNMT(3), NNT(4), NT5E(1), NT5M(1) 2822520 25 16 25 9 4 11 7 1 2 0 0.721 1.000 1.000 239 CK1PATHWAY Caseine kinase 1 (CK1) and cdk5 phosphorylate DARPP32 in the dopamine signaling pathway. CDK5, CDK5R1, CSNK1D, DRD1, DRD2, GRM1, PLCB1, PPP1CA, PPP1R1B, PPP2CA, PPP3CA, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B 17 CDK5(1), CSNK1D(1), DRD1(2), DRD2(7), GRM1(14), PLCB1(9), PPP1CA(1), PPP1R1B(1), PPP3CA(2), PRKACB(2), PRKACG(1), PRKAR1B(4) 3125928 45 34 45 13 7 17 16 2 3 0 0.418 1.000 1.000 240 IL2PATHWAY IL-2 promotes proliferation via JAK and MAP kinase and has surface receptors on activated B cells, LPS-treated monocytes, and many T cells. CSNK2A1, ELK1, FOS, GRB2, HRAS, IL2, IL2RA, IL2RB, IL2RG, JAK1, JAK3, JUN, LCK, MAP2K1, MAPK3, MAPK8, RAF1, SHC1, SOS1, STAT5A, STAT5B, SYK 22 GRB2(3), HRAS(1), IL2(3), IL2RA(3), IL2RB(4), JAK1(5), JAK3(3), LCK(5), MAP2K1(4), MAPK3(1), MAPK8(3), RAF1(2), SHC1(2), SOS1(9), STAT5A(2), STAT5B(3), SYK(1) 4554603 54 28 53 14 11 13 10 14 6 0 0.281 1.000 1.000 241 IL7PATHWAY IL-7 is required for B and T cell development and proliferation and may contribute to activation of VDJ recombination. BCL2, CREBBP, EP300, FYN, IL2RG, IL7, IL7R, JAK1, JAK3, LCK, NMI, PIK3CA, PIK3R1, PTK2B, STAT5A, STAT5B 16 BCL2(1), CREBBP(2), EP300(1), FYN(2), IL7R(6), JAK1(5), JAK3(3), LCK(5), NMI(1), PIK3CA(5), PIK3R1(1), PTK2B(6), STAT5A(2), STAT5B(3) 5444703 43 31 42 10 6 9 10 12 6 0 0.306 1.000 1.000 242 ST_FAS_SIGNALING_PATHWAY The Fas receptor induces apoptosis and NF-kB activation when bound to Fas ligand. ADPRT, ALG2, BAK1, BAX, BFAR, BIRC4, BTK, CAD, CASP10, CASP3, CASP8, CASP8AP2, CD7, CDK2AP1, CSNK1A1, DAXX, DEDD, DEDD2, DFFA, DIABLO, EGFR, EPHB2, FADD, FAF1, FAIM2, FREQ, HRB, HSPB1, IL1A, IL8, MAP2K4, MAP2K7, MAP3K1, MAP3K5, MAPK1, MAPK10, MAPK8, MAPK8IP1, MAPK8IP2, MAPK8IP3, MAPK9, MCP, MET, NFAT5, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, NR0B2, PFN1, PFN2, PTPN13, RALBP1, RIPK1, ROCK1, SMPD1, TNFRSF6, TNFRSF6B, TP53, TPX2, TRAF2, TUFM, VIL2 59 ALG2(4), BAX(1), BTK(7), CAD(9), CASP10(3), CASP3(4), CASP8(3), CASP8AP2(7), CDK2AP1(1), CSNK1A1(1), DAXX(2), DEDD(1), DFFA(3), EGFR(24), EPHB2(4), FAF1(2), FAIM2(1), IL1A(2), MAP2K4(2), MAP2K7(1), MAP3K1(3), MAP3K5(8), MAPK10(1), MAPK8(3), MAPK8IP1(3), MAPK8IP3(1), MAPK9(5), MET(10), NFAT5(4), NFKB1(2), NFKB2(3), NFKBIE(1), PFN2(3), PTPN13(7), RALBP1(1), RIPK1(3), ROCK1(7), SMPD1(1), TP53(65), TPX2(1), TUFM(1) 14276301 215 93 195 40 30 53 52 32 48 0 0.00607 1.000 1.000 243 PPARGPATHWAY PPAR-gamma is a nuclear hormone receptor that is activated by fatty acids and regulates transcription through co-activations like Src-1 and Tif2. CREBBP, EP300, LPL, NCOA1, NCOA2, PPARBP, PPARG, PPARGC1, RXRA 7 CREBBP(2), EP300(1), LPL(2), NCOA1(4), NCOA2(4), PPARG(2) 3584394 15 12 15 5 2 6 4 2 1 0 0.713 1.000 1.000 244 HSA00410_BETA_ALANINE_METABOLISM Genes involved in beta-alanine metabolism ABAT, ABP1, ACADM, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, AOC2, AOC3, CNDP1, DPYD, DPYS, ECHS1, EHHADH, GAD1, GAD2, HADHA, HIBCH, MLYCD, SMS, SRM, UPB1 25 ABAT(1), ABP1(4), ACADM(3), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2), AOC2(3), AOC3(2), CNDP1(4), DPYD(10), DPYS(6), EHHADH(3), GAD1(4), GAD2(5), HADHA(2), HIBCH(3), MLYCD(4), SMS(1) 5237529 69 32 69 18 12 23 17 9 6 2 0.227 1.000 1.000 245 TPOPATHWAY Thrombopoietin binds to its receptor and activates cell growth through the Erk and JNK MAP kinase pathways, protein kinase C, and JAK/STAT activation. CSNK2A1, FOS, GRB2, HRAS, JAK2, JUN, MAP2K1, MAPK3, MPL, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, RAF1, RASA1, SHC1, SOS1, STAT1, STAT3, STAT5A, STAT5B, THPO 22 GRB2(3), HRAS(1), JAK2(2), MAP2K1(4), MAPK3(1), MPL(1), PIK3CA(5), PIK3R1(1), PLCG1(4), PRKCA(7), RAF1(2), RASA1(1), SHC1(2), SOS1(9), STAT1(2), STAT3(4), STAT5A(2), STAT5B(3) 5794164 54 37 53 13 9 13 13 11 8 0 0.284 1.000 1.000 246 HSA00530_AMINOSUGARS_METABOLISM Genes involved in aminosugars metabolism AMDHD2, CHIA, CHIT1, CMAS, CTBS, CYB5R1, CYB5R3, GFPT1, GFPT2, GNE, GNPDA1, GNPDA2, GNPNAT1, HEXA, HEXB, HK1, HK2, HK3, LHPP, MTMR1, MTMR2, MTMR6, NAGK, NANS, NPL, PGM3, PHPT1, RENBP, UAP1 29 CHIA(3), CHIT1(3), CMAS(2), GFPT1(3), GFPT2(1), GNPDA1(1), GNPDA2(1), HEXA(1), HK1(3), HK2(5), HK3(5), MTMR1(2), MTMR2(1), MTMR6(3), NAGK(1), NANS(2), NPL(1), PGM3(2), RENBP(3), UAP1(5) 5558481 48 27 48 13 14 12 8 8 6 0 0.385 1.000 1.000 247 PYK2PATHWAY Pyk2 and Rac1 stimulate the JNK cascade and activate MKK3, which activates p38. BCAR1, CALM1, CALM2, CALM3, CRKL, GNAQ, GRB2, HRAS, JUN, MAP2K1, MAP2K2, MAP2K3, MAP2K4, MAP3K1, MAPK1, MAPK14, MAPK3, MAPK8, PAK1, PLCG1, PRKCA, PRKCB1, PTK2B, RAC1, RAF1, SHC1, SOS1, SRC, SYT1 28 BCAR1(1), CALM1(1), CRKL(2), GNAQ(2), GRB2(3), HRAS(1), MAP2K1(4), MAP2K3(3), MAP2K4(2), MAP3K1(3), MAPK14(1), MAPK3(1), MAPK8(3), PAK1(5), PLCG1(4), PRKCA(7), PTK2B(6), RAF1(2), SHC1(2), SOS1(9), SRC(2), SYT1(3) 5510364 67 37 67 18 19 20 12 8 8 0 0.263 1.000 1.000 248 HISTIDINE_METABOLISM ABP1, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH3B1, ALDH3B2, ALDH9A1, AOC2, AOC3, ASPA, CNDP1, DDC, HAL, HARS, HARSL, HDC, HNMT, MAOA, MAOB, PRPS1, PRPS2 24 ABP1(4), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH3B2(3), ALDH9A1(2), AOC2(3), AOC3(2), ASPA(1), CNDP1(4), DDC(6), HAL(1), HARS(2), HDC(6), HNMT(1), PRPS1(3), PRPS2(1) 4754940 57 31 57 16 12 19 14 9 3 0 0.285 1.000 1.000 249 NDKDYNAMINPATHWAY Endocytotic role of NDK, Phosphins and Dynamin AMPH, AP2A1, AP2M1, BIN1, CALM1, CALM2, CALM3, DNM1, EPN1, EPS15, NME1, NME2, PICALM, PPP3CA, PPP3CB, PPP3CC, SYNJ1, SYNJ2, SYT1 19 AMPH(5), AP2A1(1), AP2M1(3), BIN1(1), CALM1(1), DNM1(1), EPN1(2), EPS15(2), PPP3CA(2), PPP3CB(1), PPP3CC(1), SYNJ1(3), SYNJ2(1), SYT1(3) 4196757 27 20 27 9 3 14 6 2 2 0 0.789 1.000 1.000 250 FCER1PATHWAY In mast cells, Fc epsilon receptor 1 activates BTK, PKC, and the MAP kinase pathway to promote degranulation and arachnidonic acid release. BTK, CALM1, CALM2, CALM3, ELK1, FCER1A, FCER1G, FOS, GRB2, HRAS, JUN, LYN, MAP2K1, MAP2K4, MAP2K7, MAP3K1, MAPK1, MAPK3, MAPK8, NFATC1, NFATC2, NFATC3, NFATC4, PAK2, PIK3CA, PIK3R1, PLA2G4A, PLCG1, PPP3CA, PPP3CB, PPP3CC, PRKCB1, RAF1, SHC1, SOS1, SYK, SYT1, VAV1 37 BTK(7), CALM1(1), FCER1A(5), FCER1G(1), GRB2(3), HRAS(1), LYN(3), MAP2K1(4), MAP2K4(2), MAP2K7(1), MAP3K1(3), MAPK3(1), MAPK8(3), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), PAK2(3), PIK3CA(5), PIK3R1(1), PLA2G4A(5), PLCG1(4), PPP3CA(2), PPP3CB(1), PPP3CC(1), RAF1(2), SHC1(2), SOS1(9), SYK(1), SYT1(3), VAV1(1) 8322306 90 49 89 22 16 21 26 14 13 0 0.155 1.000 1.000 251 HSA03050_PROTEASOME Genes involved in proteasome PSMA1, PSMA2, PSMA3, PSMA4, PSMA5, PSMA6, PSMA7, PSMB1, PSMB2, PSMB3, PSMB4, PSMB5, PSMB6, PSMB7, PSMC2, PSMC3, PSMD1, PSMD11, PSMD12, PSMD13, PSMD2, PSMD6 22 PSMA3(1), PSMA6(1), PSMB4(3), PSMC2(2), PSMD1(2), PSMD11(3), PSMD12(3), PSMD13(2), PSMD2(2), PSMD6(1) 3087486 20 12 20 7 6 5 4 4 1 0 0.584 1.000 1.000 252 FMLPPATHWAY The fMLP receptor is a G-protein coupled receptor in neutrophils that recognizes formylated bacterial peptides and activates NADPH oxidase. CALM1, CALM2, CALM3, CAMK1, CAMK1G, ELK1, FPR1, GNA15, GNB1, GNGT1, HRAS, MAP2K1, MAP2K2, MAP2K3, MAP2K6, MAP3K1, MAPK1, MAPK14, MAPK3, NCF1, NCF2, NFATC1, NFATC2, NFATC3, NFATC4, NFKB1, NFKBIA, PAK1, PIK3C2G, PLCB1, PPP3CA, PPP3CB, PPP3CC, RAC1, RAF1, RELA, SYT1 37 CALM1(1), CAMK1(2), FPR1(1), GNB1(1), GNGT1(1), HRAS(1), MAP2K1(4), MAP2K3(3), MAP3K1(3), MAPK14(1), MAPK3(1), NCF1(1), NCF2(2), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), NFKB1(2), PAK1(5), PIK3C2G(3), PLCB1(9), PPP3CA(2), PPP3CB(1), PPP3CC(1), RAF1(2), SYT1(3) 7463424 65 40 65 16 16 21 16 4 8 0 0.166 1.000 1.000 253 ST_GA12_PATHWAY G-alpha-12 promotes cell survival and proliferation, is involved in the stress response, and activates JNK. BF, BTK, DLG4, EPHB2, F2, F2RL1, F2RL2, F2RL3, JUN, MAP2K5, MAPK1, MAPK7, MAPK8, MYEF2, PLD1, PLD2, PLD3, PTK2, RAF1, RASAL1, SRC, TEC, VAV1 22 BTK(7), DLG4(1), EPHB2(4), F2(5), F2RL1(1), F2RL2(2), F2RL3(2), MAPK7(4), MAPK8(3), MYEF2(3), PLD1(7), PLD2(3), PTK2(7), RAF1(2), RASAL1(6), SRC(2), TEC(4), VAV1(1) 5335569 64 34 64 16 11 16 19 10 8 0 0.240 1.000 1.000 254 PGC1APATHWAY PCG-1a is expressed in skeletal muscle, heart muscle, and brown fat, and is a coactivator for receptors such as glucocorticoid receptor and thyroid hormone receptor. CALM1, CALM2, CALM3, CAMK1, CAMK1G, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CAMK4, ESRRA, HDAC5, MEF2A, MEF2B, MEF2C, MEF2D, PPARA, PPARGC1, PPP3CA, PPP3CB, PPP3CC, SLC2A4, SYT1, YWHAH 23 CALM1(1), CAMK1(2), CAMK2A(1), CAMK2D(1), CAMK2G(2), CAMK4(4), HDAC5(2), MEF2C(1), MEF2D(1), PPP3CA(2), PPP3CB(1), PPP3CC(1), SYT1(3) 3963783 22 17 22 9 2 10 5 3 2 0 0.813 1.000 1.000 255 HSA00340_HISTIDINE_METABOLISM Genes involved in histidine metabolism ABP1, ACY3, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH3B1, ALDH3B2, ALDH7A1, ALDH9A1, AMDHD1, AOC2, AOC3, ASPA, CARM1, CNDP1, DDC, FTCD, HAL, HARS, HARS2, HDC, HEMK1, HNMT, LCMT1, LCMT2, MAOA, MAOB, METTL2B, METTL6, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, PRPS1, PRPS2, UROC1, WBSCR22 41 ABP1(4), ACY3(1), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH3B2(3), ALDH7A1(1), ALDH9A1(2), AMDHD1(3), AOC2(3), AOC3(2), ASPA(1), CARM1(3), CNDP1(4), DDC(6), FTCD(2), HAL(1), HARS(2), HARS2(1), HDC(6), HNMT(1), LCMT1(1), LCMT2(4), METTL2B(3), METTL6(1), PRMT2(1), PRMT3(1), PRMT5(1), PRMT6(2), PRMT7(3), PRMT8(5), PRPS1(3), PRPS2(1), UROC1(6), WBSCR22(1) 7711749 90 48 89 22 18 25 29 11 7 0 0.0812 1.000 1.000 256 HSA00600_SPHINGOLIPID_METABOLISM Genes involved in sphingolipid metabolism ARSA, ARSD, ARSE, ASAH1, ASAH3L, B4GALT6, CERK, DEGS1, DEGS2, ENPP7, FVT1, GAL3ST1, GALC, GBA, GLA, GLB1, LCT, NEU1, NEU2, NEU3, NEU4, PHCA, PPAP2A, PPAP2B, PPAP2C, SGMS1, SGMS2, SGPP1, SGPP2, SMPD1, SMPD2, SMPD3, SMPD4, SPHK1, SPHK2, SPTLC1, SPTLC2, UGCG, UGT8 36 ARSA(1), ARSD(2), ASAH1(2), B4GALT6(3), CERK(3), DEGS1(3), ENPP7(3), GAL3ST1(3), GALC(3), GBA(3), GLA(2), LCT(12), NEU3(1), NEU4(5), PPAP2B(1), SGMS1(1), SGMS2(2), SGPP1(1), SMPD1(1), SMPD2(1), SMPD3(1), SPHK2(1), SPTLC1(1), SPTLC2(1), UGT8(1) 6989607 58 39 57 14 10 20 16 7 5 0 0.176 1.000 1.000 257 CXCR4PATHWAY CXCR4 is a G-protein coupled receptor that responds to the ligand SDF-1 by activating Ras and PI3 kinase to promote lymphocyte chemotaxis. BCAR1, CRK, CXCL12, CXCR4, GNAI1, GNAQ, GNB1, GNGT1, HRAS, MAP2K1, MAPK1, MAPK3, NFKB1, PIK3C2G, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, PTK2, PTK2B, PXN, RAF1, RELA 23 BCAR1(1), CXCR4(3), GNAI1(1), GNAQ(2), GNB1(1), GNGT1(1), HRAS(1), MAP2K1(4), MAPK3(1), NFKB1(2), PIK3C2G(3), PIK3CA(5), PIK3R1(1), PLCG1(4), PRKCA(7), PTK2(7), PTK2B(6), RAF1(2) 5390910 52 32 51 14 12 16 13 6 5 0 0.357 1.000 1.000 258 GLEEVECPATHWAY The drug Gleevec specifically targets the abnormal bcr-abl protein, an apoptosis inhibitor present in chronic myeloid leukemia. AKT1, BCL2, BCR, CRKL, FOS, GRB2, HRAS, JAK2, JUN, MAP2K1, MAP2K4, MAP3K1, MAPK3, MAPK8, MYC, PIK3CA, PIK3R1, RAF1, SOS1, STAT1, STAT5A, STAT5B 22 BCL2(1), BCR(3), CRKL(2), GRB2(3), HRAS(1), JAK2(2), MAP2K1(4), MAP2K4(2), MAP3K1(3), MAPK3(1), MAPK8(3), PIK3CA(5), PIK3R1(1), RAF1(2), SOS1(9), STAT1(2), STAT5A(2), STAT5B(3) 5414259 49 34 48 13 7 9 13 10 10 0 0.316 1.000 1.000 259 HSA04120_UBIQUITIN_MEDIATED_PROTEOLYSIS Genes involved in ubiquitin mediated proteolysis ANAPC1, ANAPC10, ANAPC11, ANAPC2, ANAPC4, ANAPC5, ANAPC7, BTRC, CDC16, CDC20, CDC23, CDC26, CDC27, CUL1, CUL2, CUL3, FBXW11, FBXW7, FZR1, ITCH, LOC728919, RBX1, SKP1, SKP2, SMURF1, SMURF2, TCEB1, TCEB2, UBA1, UBE2C, UBE2D1, UBE2D2, UBE2D3, UBE2D4, UBE2E1, UBE2E2, UBE2E3, VHL, WWP1, WWP2 39 ANAPC1(2), ANAPC10(1), ANAPC11(1), ANAPC2(1), ANAPC4(1), ANAPC5(2), ANAPC7(2), BTRC(5), CDC16(1), CDC20(2), CDC23(1), CDC27(2), CUL1(3), CUL2(4), CUL3(3), FBXW7(2), FZR1(2), ITCH(3), SKP1(1), SKP2(3), SMURF1(2), SMURF2(2), TCEB1(1), UBE2D2(1), UBE2D3(3), UBE2D4(1), VHL(1), WWP1(2), WWP2(2) 7840491 57 35 56 14 17 8 13 11 8 0 0.232 1.000 1.000 260 HSA00450_SELENOAMINO_ACID_METABOLISM Genes involved in selenoamino acid metabolism AHCY, CARM1, CBS, CTH, GGT1, GGTL3, GGTL4, HEMK1, KIAA0828, LCMT1, LCMT2, MARS, MARS2, MAT1A, MAT2B, METTL2B, METTL6, PAPSS1, PAPSS2, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, SCLY, SEPHS1, SEPHS2, WBSCR22 26 AHCY(2), CARM1(3), CBS(1), GGT1(1), LCMT1(1), LCMT2(4), MARS(1), MARS2(4), MAT1A(2), MAT2B(3), METTL2B(3), METTL6(1), PAPSS1(2), PAPSS2(1), PRMT2(1), PRMT3(1), PRMT5(1), PRMT6(2), PRMT7(3), PRMT8(5), SCLY(2), SEPHS1(3), WBSCR22(1) 4830663 48 28 47 14 15 10 18 1 4 0 0.280 1.000 1.000 261 P38MAPKPATHWAY The Rho family GTPases activate the p38 MAPKs under environmental stress or in the presence of pro-inflammatory cytokines. ATF2, CDC42, CREB1, DAXX, DDIT3, ELK1, GRB2, HMGN1, HRAS, HSPB1, HSPB2, MAP2K4, MAP2K6, MAP3K1, MAP3K5, MAP3K7, MAP3K9, MAPK14, MAPKAPK2, MAPKAPK5, MAX, MEF2A, MEF2B, MEF2C, MEF2D, MKNK1, MYC, PDZGEF1, PLA2G4A, RAC1, RIPK1, RPS6KA5, SHC1, STAT1, TGFB1, TGFB2, TGFB3, TGFBR1, TRADD, TRAF2 39 ATF2(2), CDC42(2), DAXX(2), DDIT3(4), GRB2(3), HRAS(1), HSPB2(1), MAP2K4(2), MAP3K1(3), MAP3K5(8), MAP3K7(3), MAP3K9(5), MAPK14(1), MAPKAPK2(2), MAPKAPK5(3), MAX(1), MEF2C(1), MEF2D(1), MKNK1(1), PLA2G4A(5), RIPK1(3), RPS6KA5(2), SHC1(2), STAT1(2), TGFB1(2), TGFB2(5), TGFB3(1), TGFBR1(2) 7139763 70 39 70 18 11 14 18 14 13 0 0.344 1.000 1.000 262 BETA_ALANINE_METABOLISM ABAT, ABP1, ACADL, ACADM, ACADSB, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, AOC2, AOC3, CNDP1, DPYD, DPYS, ECHS1, EHHADH, GAD1, GAD2, HADHA, MLYCD, SDS, SMS, UPB1 27 ABAT(1), ABP1(4), ACADM(3), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH9A1(2), AOC2(3), AOC3(2), CNDP1(4), DPYD(10), DPYS(6), EHHADH(3), GAD1(4), GAD2(5), HADHA(2), MLYCD(4), SMS(1) 5625948 72 32 72 21 13 27 17 8 5 2 0.370 1.000 1.000 263 ST_WNT_CA2_CYCLIC_GMP_PATHWAY Some Wnt glycoprotein/Frizzled receptor interactions increase intracellular calcium and decrease cGMP. BF, CAMK2A, CAMK2B, CAMK2D, CAMK2G, DAG1, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, NFAT5, PDE6A, PDE6B, PDE6C, PDE6D, PDE6G, PDE6H, SLC6A13, TF 19 CAMK2A(1), CAMK2D(1), CAMK2G(2), DAG1(2), ITPKA(1), ITPKB(4), ITPR1(7), ITPR2(15), ITPR3(4), NFAT5(4), PDE6A(6), PDE6B(3), PDE6C(2), PDE6D(1), SLC6A13(3), TF(2) 7005087 58 29 57 15 15 20 12 4 7 0 0.260 1.000 1.000 264 IGF1PATHWAY Growth factor IGF-1 stimulates growth and inhibits apoptosis by activating the MAP kinase pathway in a variety of cell types. CSNK2A1, ELK1, FOS, GRB2, HRAS, IGF1, IGF1R, IRS1, JUN, MAP2K1, MAPK3, MAPK8, PIK3CA, PIK3R1, PTPN11, RAF1, RASA1, SHC1, SOS1, SRF 20 GRB2(3), HRAS(1), IGF1(3), IGF1R(6), IRS1(12), MAP2K1(4), MAPK3(1), MAPK8(3), PIK3CA(5), PIK3R1(1), PTPN11(1), RAF1(2), RASA1(1), SHC1(2), SOS1(9) 4777644 54 29 53 16 14 15 11 10 4 0 0.440 1.000 1.000 265 METPATHWAY The hepatocyte growth factor receptor c-Met stimulates proliferation and alters cell motility and adhesion on binding the ligand HGF. ACTA1, CRK, CRKL, DOCK1, ELK1, FOS, GAB1, GRB2, GRF2, HGF, HRAS, ITGA1, ITGB1, JUN, MAP2K1, MAP2K2, MAP4K1, MAPK1, MAPK3, MAPK8, MET, PAK1, PIK3CA, PIK3R1, PTEN, PTK2, PTK2B, PTPN11, PXN, RAF1, RAP1A, RAP1B, RASA1, SOS1, SRC, STAT3 35 CRKL(2), DOCK1(4), GAB1(2), GRB2(3), HGF(18), HRAS(1), ITGA1(5), ITGB1(2), MAP2K1(4), MAP4K1(2), MAPK3(1), MAPK8(3), MET(10), PAK1(5), PIK3CA(5), PIK3R1(1), PTEN(3), PTK2(7), PTK2B(6), PTPN11(1), RAF1(2), RAP1A(1), RAP1B(1), RASA1(1), SOS1(9), SRC(2), STAT3(4) 8543283 105 53 103 29 19 28 18 25 15 0 0.440 1.000 1.000 266 GLUTAMATE_METABOLISM ABAT, ALDH4A1, ALDH5A1, CAD, CPS1, EPRS, GAD1, GAD2, GCLC, GCLM, GFPT1, GLS, GLS2, GLUD1, GLUL, GMPS, GOT1, GOT2, GPT, GPT2, GSS, NADSYN1, PPAT, QARS 24 ABAT(1), ALDH4A1(1), ALDH5A1(2), CAD(9), CPS1(23), EPRS(9), GAD1(4), GAD2(5), GCLC(6), GCLM(1), GFPT1(3), GLS(1), GLS2(2), GLUD1(3), GMPS(5), GOT1(2), GOT2(3), GPT2(2), GSS(2), PPAT(3), QARS(2) 6443937 89 38 89 24 17 29 22 11 9 1 0.397 1.000 1.000 267 HSA00970_AMINOACYL_TRNA_BIOSYNTHESIS Genes involved in aminoacyl-tRNA biosynthesis AARS, AARS2, CARS, CARS2, DARS, DARS2, EARS2, EPRS, FARS2, FARSA, FARSB, GARS, HARS, HARS2, IARS, IARS2, KARS, LARS, LARS2, MARS, MARS2, MTFMT, NARS, NARS2, PARS2, QARS, RARS, RARS2, SARS, SARS2, TARS, TARS2, VARS, VARS2, WARS, WARS2, YARS, YARS2 38 AARS(1), AARS2(3), CARS(1), CARS2(1), DARS2(2), EARS2(1), EPRS(9), FARS2(1), FARSA(1), FARSB(1), GARS(3), HARS(2), HARS2(1), IARS(3), IARS2(4), KARS(3), LARS(3), LARS2(1), MARS(1), MARS2(4), MTFMT(1), NARS(2), NARS2(2), QARS(2), RARS(4), RARS2(1), TARS(3), TARS2(5), VARS(5), VARS2(6), WARS(2), WARS2(8), YARS(1), YARS2(2) 10533753 90 38 90 22 20 35 17 10 8 0 0.196 1.000 1.000 268 BUTANOATE_METABOLISM AACS, ABAT, ACADS, ACAT1, ACAT2, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH5A1, ALDH9A1, BDH, BUCS1, ECHS1, EHHADH, GAD1, GAD2, HADHA, HMGCL, L2HGDH, OXCT1, PDHA1, PDHA2, PDHB, SDHB, SDS 27 AACS(5), ABAT(1), ACAT1(1), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH5A1(2), ALDH9A1(2), EHHADH(3), GAD1(4), GAD2(5), HADHA(2), OXCT1(4), PDHA1(1), PDHA2(8) 4979529 56 33 56 17 11 20 13 5 5 2 0.458 1.000 1.000 269 INSULINPATHWAY Insulin regulates glucose levels via Ras-mediated transcriptional activation. CSNK2A1, ELK1, FOS, GRB2, HRAS, INS, INSR, IRS1, JUN, MAP2K1, MAPK3, MAPK8, PIK3CA, PIK3R1, PTPN11, RAF1, RASA1, SHC1, SLC2A4, SOS1, SRF 21 GRB2(3), HRAS(1), INSR(1), IRS1(12), MAP2K1(4), MAPK3(1), MAPK8(3), PIK3CA(5), PIK3R1(1), PTPN11(1), RAF1(2), RASA1(1), SHC1(2), SOS1(9) 4923285 46 26 45 14 12 9 10 11 4 0 0.448 1.000 1.000 270 HSA04510_FOCAL_ADHESION Genes involved in focal adhesion ACTB, ACTG1, ACTN1, ACTN2, ACTN3, ACTN4, AKT1, AKT2, AKT3, ARHGAP5, BAD, BCAR1, BCL2, BIRC2, BIRC3, BIRC4, BRAF, CAPN2, CAV1, CAV2, CAV3, CCND1, CCND2, CCND3, CDC42, CHAD, COL11A1, COL11A2, COL1A1, COL1A2, COL2A1, COL3A1, COL4A1, COL4A2, COL4A4, COL4A6, COL5A1, COL5A2, COL5A3, COL6A1, COL6A2, COL6A3, COL6A6, COMP, CRK, CRKL, CTNNB1, DIAPH1, DOCK1, EGF, EGFR, ELK1, ERBB2, FARP2, FIGF, FLNA, FLNB, FLNC, FLT1, FN1, FYN, GRB2, GRLF1, GSK3B, HGF, HRAS, IBSP, IGF1, IGF1R, ILK, ITGA1, ITGA10, ITGA11, ITGA2, ITGA2B, ITGA3, ITGA4, ITGA5, ITGA6, ITGA7, ITGA8, ITGA9, ITGAV, ITGB1, ITGB3, ITGB4, ITGB5, ITGB6, ITGB7, ITGB8, JUN, KDR, LAMA1, LAMA2, LAMA3, LAMA4, LAMA5, LAMB1, LAMB2, LAMB3, LAMB4, LAMC1, LAMC2, LAMC3, LOC653852, MAP2K1, MAPK1, MAPK10, MAPK3, MAPK8, MAPK9, MET, MLCK, MRCL3, MRLC2, MYL2, MYL5, MYL7, MYL8P, MYL9, MYLC2PL, MYLK, MYLK2, MYLPF, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PARVA, PARVB, PARVG, PDGFA, PDGFB, PDGFC, PDGFD, PDGFRA, PDGFRB, PDPK1, PGF, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PIP5K1C, PPP1CA, PPP1CB, PPP1CC, PPP1R12A, PRKCA, PRKCB1, PRKCG, PTEN, PTK2, PXN, RAC1, RAC2, RAC3, RAF1, RAP1A, RAP1B, RAPGEF1, RELN, RHOA, ROCK1, ROCK2, SHC1, SHC2, SHC3, SHC4, SOS1, SOS2, SPP1, SRC, THBS1, THBS2, THBS3, THBS4, TLN1, TLN2, TNC, TNN, TNR, TNXB, VASP, VAV1, VAV2, VAV3, VCL, VEGFA, VEGFB, VEGFC, VTN, VWF, ZYX 192 ACTG1(2), ACTN2(14), ACTN3(2), ACTN4(1), AKT2(1), AKT3(2), ARHGAP5(4), BCAR1(1), BCL2(1), BIRC2(2), BIRC3(2), BRAF(13), CCND1(2), CCND3(1), CDC42(2), CHAD(1), COL11A1(35), COL11A2(1), COL1A1(2), COL1A2(8), COL2A1(2), COL3A1(24), COL4A1(7), COL4A2(9), COL4A4(8), COL4A6(9), COL5A1(14), COL5A2(17), COL5A3(4), COL6A1(2), COL6A2(3), COL6A3(21), COL6A6(11), COMP(1), CRKL(2), CTNNB1(9), DIAPH1(3), DOCK1(4), EGF(7), EGFR(24), ERBB2(5), FARP2(2), FIGF(1), FLNA(7), FLNB(9), FLNC(9), FLT1(12), FN1(4), FYN(2), GRB2(3), GRLF1(6), GSK3B(1), HGF(18), HRAS(1), IBSP(1), IGF1(3), IGF1R(6), ITGA1(5), ITGA10(2), ITGA11(5), ITGA2(4), ITGA2B(3), ITGA3(1), ITGA4(11), ITGA5(4), ITGA6(3), ITGA7(2), ITGA8(15), ITGA9(1), ITGAV(5), ITGB1(2), ITGB3(2), ITGB4(3), ITGB5(6), ITGB6(1), ITGB7(1), ITGB8(1), KDR(16), LAMA1(14), LAMA2(16), LAMA3(22), LAMA4(7), LAMA5(7), LAMB1(12), LAMB2(8), LAMB3(4), LAMB4(14), LAMC1(8), LAMC2(8), LAMC3(9), MAP2K1(4), MAPK10(1), MAPK3(1), MAPK8(3), MAPK9(5), MET(10), MYL2(2), MYL5(1), MYL7(1), MYLK(10), MYLK2(2), MYLPF(1), PAK1(5), PAK2(3), PAK3(2), PAK4(1), PAK7(15), PARVA(2), PARVG(2), PDGFA(6), PDGFD(3), PDGFRA(7), PDGFRB(6), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PIP5K1C(2), PPP1CA(1), PPP1CB(1), PPP1CC(1), PPP1R12A(1), PRKCA(7), PRKCG(5), PTEN(3), PTK2(7), RAF1(2), RAP1A(1), RAP1B(1), RAPGEF1(1), RELN(28), RHOA(1), ROCK1(7), ROCK2(3), SHC1(2), SHC2(1), SHC3(2), SHC4(4), SOS1(9), SOS2(5), SRC(2), THBS1(4), THBS2(12), THBS3(1), THBS4(4), TLN1(9), TLN2(4), TNC(9), TNN(18), TNR(19), TNXB(6), VAV1(1), VAV2(2), VAV3(9), VCL(2), VEGFA(1), VEGFC(6), VTN(2), VWF(7), ZYX(2) 72282183 918 121 895 315 154 303 197 131 130 3 0.986 1.000 1.000 271 HSA04810_REGULATION_OF_ACTIN_CYTOSKELETON Genes involved in regulation of actin cytoskeleton ABI2, ACTN1, ACTN2, ACTN3, ACTN4, APC, APC2, ARAF, ARHGEF1, ARHGEF12, ARHGEF4, ARHGEF6, ARHGEF7, ARPC1A, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, ARPC5L, BAIAP2, BCAR1, BDKRB1, BDKRB2, BRAF, C3orf10, CD14, CDC42, CFL1, CFL2, CHRM1, CHRM2, CHRM3, CHRM4, CHRM5, CRK, CRKL, CSK, CYFIP1, CYFIP2, DIAPH1, DIAPH2, DIAPH3, DOCK1, EGF, EGFR, EZR, F2, F2R, FGD1, FGD3, FGF1, FGF10, FGF11, FGF12, FGF13, FGF14, FGF16, FGF17, FGF18, FGF19, FGF2, FGF20, FGF21, FGF22, FGF23, FGF3, FGF4, FGF5, FGF6, FGF7, FGF8, FGF9, FGFR1, FGFR2, FGFR3, FGFR4, FN1, GIT1, GNA12, GNA13, GNG12, GRLF1, GSN, HRAS, INS, IQGAP1, IQGAP2, IQGAP3, ITGA1, ITGA10, ITGA11, ITGA2, ITGA2B, ITGA3, ITGA4, ITGA5, ITGA6, ITGA7, ITGA8, ITGA9, ITGAD, ITGAE, ITGAL, ITGAM, ITGAV, ITGAX, ITGB1, ITGB2, ITGB3, ITGB4, ITGB5, ITGB6, ITGB7, ITGB8, KRAS, LIMK1, LIMK2, LOC200025, LOC645126, LOC653888, MAP2K1, MAP2K2, MAPK1, MAPK3, MLCK, MOS, MRAS, MRCL3, MRLC2, MSN, MYH10, MYH14, MYH9, MYL2, MYL5, MYL7, MYL8P, MYL9, MYLC2PL, MYLK, MYLK2, MYLPF, NCKAP1, NCKAP1L, NRAS, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PDGFA, PDGFB, PDGFRA, PDGFRB, PFN1, PFN2, PFN3, PFN4, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PIP4K2A, PIP4K2B, PIP4K2C, PIP5K1A, PIP5K1B, PIP5K1C, PIP5K3, PPP1CA, PPP1CB, PPP1CC, PPP1R12A, PPP1R12B, PTK2, PXN, RAC1, RAC2, RAC3, RAF1, RDX, RHOA, ROCK1, ROCK2, RRAS, RRAS2, SCIN, SLC9A1, SOS1, SOS2, SSH1, SSH2, SSH3, TIAM1, TIAM2, TMSB4X, TMSB4Y, TMSL3, VAV1, VAV2, VAV3, VCL, WAS, WASF1, WASF2, WASL 203 ABI2(1), ACTN2(14), ACTN3(2), ACTN4(1), APC(6), APC2(1), ARAF(3), ARHGEF1(1), ARHGEF12(5), ARHGEF6(4), ARHGEF7(3), ARPC1B(1), ARPC2(1), ARPC3(1), ARPC5(1), BAIAP2(2), BCAR1(1), BRAF(13), CD14(1), CDC42(2), CFL2(1), CHRM1(1), CHRM2(4), CHRM3(4), CHRM4(2), CRKL(2), CYFIP1(4), CYFIP2(7), DIAPH1(3), DIAPH2(3), DIAPH3(4), DOCK1(4), EGF(7), EGFR(24), F2(5), F2R(2), FGD1(1), FGD3(2), FGF10(2), FGF12(2), FGF13(4), FGF14(5), FGF19(1), FGF20(1), FGF21(1), FGF23(3), FGF3(1), FGF4(2), FGF5(1), FGF9(1), FGFR1(5), FGFR2(5), FGFR3(2), FGFR4(1), FN1(4), GNA12(1), GNA13(1), GNG12(2), GRLF1(6), GSN(2), HRAS(1), IQGAP1(5), IQGAP2(7), IQGAP3(3), ITGA1(5), ITGA10(2), ITGA11(5), ITGA2(4), ITGA2B(3), ITGA3(1), ITGA4(11), ITGA5(4), ITGA6(3), ITGA7(2), ITGA8(15), ITGA9(1), ITGAD(12), ITGAE(6), ITGAL(17), ITGAM(9), ITGAV(5), ITGAX(11), ITGB1(2), ITGB2(2), ITGB3(2), ITGB4(3), ITGB5(6), ITGB6(1), ITGB7(1), ITGB8(1), KRAS(35), LIMK2(1), MAP2K1(4), MAPK3(1), MRAS(1), MYH10(4), MYH14(2), MYH9(4), MYL2(2), MYL5(1), MYL7(1), MYLK(10), MYLK2(2), MYLPF(1), NCKAP1(2), NCKAP1L(7), NRAS(1), PAK1(5), PAK2(3), PAK3(2), PAK4(1), PAK7(15), PDGFA(6), PDGFRA(7), PDGFRB(6), PFN2(3), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PIP4K2A(1), PIP4K2B(2), PIP4K2C(3), PIP5K1A(5), PIP5K1B(5), PIP5K1C(2), PPP1CA(1), PPP1CB(1), PPP1CC(1), PPP1R12A(1), PPP1R12B(4), PTK2(7), RAF1(2), RDX(1), RHOA(1), ROCK1(7), ROCK2(3), RRAS2(1), SCIN(3), SLC9A1(1), SOS1(9), SOS2(5), SSH1(2), SSH2(2), SSH3(1), TIAM1(10), TIAM2(6), TMSL3(1), VAV1(1), VAV2(2), VAV3(9), VCL(2), WAS(2), WASF1(4), WASL(4) 53950638 606 120 558 190 110 184 137 96 79 0 0.659 1.000 1.000 272 HSA04010_MAPK_SIGNALING_PATHWAY Genes involved in MAPK signaling pathway ACVR1B, ACVR1C, AKT1, AKT2, AKT3, ARRB1, ARRB2, ATF2, ATF4, BDNF, BRAF, CACNA1A, CACNA1B, CACNA1C, CACNA1D, CACNA1E, CACNA1F, CACNA1G, CACNA1H, CACNA1I, CACNA1S, CACNA2D1, CACNA2D2, CACNA2D3, CACNA2D4, CACNB1, CACNB2, CACNB3, CACNB4, CACNG1, CACNG2, CACNG3, CACNG4, CACNG5, CACNG6, CACNG7, CACNG8, CASP3, CD14, CDC25B, CDC42, CHP, CHUK, CRK, CRKL, DAXX, DDIT3, DUSP1, DUSP10, DUSP14, DUSP16, DUSP2, DUSP3, DUSP4, DUSP5, DUSP6, DUSP7, DUSP8, DUSP9, ECSIT, EGF, EGFR, ELK1, ELK4, EVI1, FAS, FASLG, FGF1, FGF10, FGF11, FGF12, FGF13, FGF14, FGF16, FGF17, FGF18, FGF19, FGF2, FGF20, FGF21, FGF22, FGF23, FGF3, FGF4, FGF5, FGF6, FGF7, FGF8, FGF9, FGFR1, FGFR2, FGFR3, FGFR4, FLNA, FLNB, FLNC, FOS, GADD45A, GADD45B, GADD45G, GNA12, GNG12, GRB2, HRAS, IKBKB, IKBKG, IL1A, IL1B, IL1R1, IL1R2, JUN, JUND, KRAS, LOC653852, MAP2K1, MAP2K1IP1, MAP2K2, MAP2K3, MAP2K4, MAP2K5, MAP2K6, MAP2K7, MAP3K1, MAP3K10, MAP3K12, MAP3K13, MAP3K14, MAP3K2, MAP3K3, MAP3K4, MAP3K5, MAP3K6, MAP3K7, MAP3K7IP1, MAP3K7IP2, MAP3K8, MAP4K1, MAP4K2, MAP4K3, MAP4K4, MAPK1, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPK7, MAPK8, MAPK8IP1, MAPK8IP2, MAPK8IP3, MAPK9, MAPKAPK2, MAPKAPK3, MAPKAPK5, MAPT, MAX, MEF2C, MKNK1, MKNK2, MOS, MRAS, MYC, NF1, NFATC2, NFATC4, NFKB1, NFKB2, NGFB, NLK, NR4A1, NRAS, NTF3, NTF5, NTRK1, NTRK2, PAK1, PAK2, PDGFA, PDGFB, PDGFRA, PDGFRB, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PPM1A, PPM1B, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PPP5C, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCG, PRKX, PRKY, PTPN5, PTPN7, PTPRR, RAC1, RAC2, RAC3, RAF1, RAP1A, RAP1B, RAPGEF2, RASA1, RASA2, RASGRF1, RASGRF2, RASGRP1, RASGRP2, RASGRP3, RASGRP4, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA4, RPS6KA5, RPS6KA6, RRAS, RRAS2, SOS1, SOS2, SRF, STK3, STK4, STMN1, TAOK1, TAOK2, TAOK3, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, TNF, TNFRSF1A, TP53, TRAF2, TRAF6, ZAK 247 ACVR1B(4), ACVR1C(2), AKT2(1), AKT3(2), ARRB1(1), ARRB2(1), ATF2(2), BDNF(1), BRAF(13), CACNA1A(6), CACNA1B(9), CACNA1C(8), CACNA1D(7), CACNA1E(26), CACNA1F(5), CACNA1G(3), CACNA1H(5), CACNA1I(5), CACNA1S(5), CACNA2D1(10), CACNA2D2(1), CACNA2D3(6), CACNA2D4(3), CACNB1(1), CACNB2(5), CACNB4(1), CACNG2(1), CACNG3(3), CACNG4(2), CACNG5(4), CACNG6(1), CACNG8(1), CASP3(4), CD14(1), CDC25B(1), CDC42(2), CHUK(1), CRKL(2), DAXX(2), DDIT3(4), DUSP10(6), DUSP16(2), DUSP2(1), DUSP6(1), DUSP7(2), EGF(7), EGFR(24), ELK4(4), FAS(2), FASLG(2), FGF10(2), FGF12(2), FGF13(4), FGF14(5), FGF19(1), FGF20(1), FGF21(1), FGF23(3), FGF3(1), FGF4(2), FGF5(1), FGF9(1), FGFR1(5), FGFR2(5), FGFR3(2), FGFR4(1), FLNA(7), FLNB(9), FLNC(9), GADD45A(1), GNA12(1), GNG12(2), GRB2(3), HRAS(1), IKBKB(2), IL1A(2), IL1R2(4), KRAS(35), MAP2K1(4), MAP2K3(3), MAP2K4(2), MAP2K7(1), MAP3K1(3), MAP3K10(1), MAP3K12(4), MAP3K13(6), MAP3K14(1), MAP3K2(4), MAP3K3(2), MAP3K4(8), MAP3K5(8), MAP3K6(1), MAP3K7(3), MAP3K8(1), MAP4K1(2), MAP4K3(2), MAPK10(1), MAPK14(1), MAPK3(1), MAPK7(4), MAPK8(3), MAPK8IP1(3), MAPK8IP3(1), MAPK9(5), MAPKAPK2(2), MAPKAPK3(1), MAPKAPK5(3), MAPT(2), MAX(1), MEF2C(1), MKNK1(1), MRAS(1), NF1(16), NFATC2(5), NFATC4(2), NFKB1(2), NFKB2(3), NR4A1(1), NRAS(1), NTF3(2), NTRK1(6), NTRK2(5), PAK1(5), PAK2(3), PDGFA(6), PDGFRA(7), PDGFRB(6), PLA2G10(1), PLA2G12B(1), PLA2G1B(1), PLA2G2A(3), PLA2G2E(1), PLA2G2F(1), PLA2G3(4), PLA2G4A(5), PLA2G6(1), PPM1B(2), PPP3CA(2), PPP3CB(1), PPP3CC(1), PPP3R1(2), PPP3R2(2), PPP5C(1), PRKACB(2), PRKACG(1), PRKCA(7), PRKCG(5), PRKX(3), PTPN5(2), PTPRR(7), RAF1(2), RAP1A(1), RAP1B(1), RAPGEF2(9), RASA1(1), RASA2(2), RASGRF1(1), RASGRF2(9), RASGRP2(1), RASGRP3(5), RASGRP4(2), RPS6KA2(2), RPS6KA3(1), RPS6KA4(1), RPS6KA5(2), RPS6KA6(3), RRAS2(1), SOS1(9), SOS2(5), STK4(3), TAOK2(5), TAOK3(3), TGFB1(2), TGFB2(5), TGFB3(1), TGFBR1(2), TP53(65), TRAF6(3), ZAK(1) 55867707 687 119 629 194 127 181 159 110 107 3 0.104 1.000 1.000 273 HSA04020_CALCIUM_SIGNALING_PATHWAY Genes involved in calcium signaling pathway ADCY1, ADCY2, ADCY3, ADCY4, ADCY7, ADCY8, ADCY9, ADORA2A, ADORA2B, ADRA1A, ADRA1B, ADRA1D, ADRB1, ADRB2, ADRB3, AGTR1, ATP2A1, ATP2A2, ATP2A3, ATP2B1, ATP2B2, ATP2B3, ATP2B4, AVPR1A, AVPR1B, BDKRB1, BDKRB2, BST1, CACNA1A, CACNA1B, CACNA1C, CACNA1D, CACNA1E, CACNA1F, CACNA1G, CACNA1H, CACNA1I, CACNA1S, CALM1, CALM2, CALM3, CALML3, CALML6, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CAMK4, CCKAR, CCKBR, CD38, CHP, CHRM1, CHRM2, CHRM3, CHRM5, CHRNA7, CYSLTR1, CYSLTR2, DRD1, EDNRA, EDNRB, EGFR, ERBB2, ERBB3, ERBB4, F2R, GNA11, GNA14, GNA15, GNAL, GNAQ, GNAS, GRIN1, GRIN2A, GRIN2C, GRIN2D, GRM1, GRM5, GRPR, HRH1, HRH2, HTR2A, HTR2B, HTR2C, HTR4, HTR5A, HTR6, HTR7, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, LHCGR, LTB4R2, MLCK, MYLK, MYLK2, NOS1, NOS2A, NOS3, NTSR1, OXTR, P2RX1, P2RX2, P2RX3, P2RX4, P2RX5, P2RX7, P2RXL1, PDE1A, PDE1B, PDE1C, PDGFRA, PDGFRB, PHKA1, PHKA2, PHKB, PHKG1, PHKG2, PLCB1, PLCB2, PLCB3, PLCB4, PLCD1, PLCD3, PLCD4, PLCE1, PLCG1, PLCG2, PLCZ1, PLN, PPID, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCG, PRKX, PRKY, PTAFR, PTGER1, PTGER3, PTGFR, PTK2B, RYR1, RYR2, RYR3, SLC25A4, SLC25A5, SLC25A6, SLC8A1, SLC8A2, SLC8A3, SPHK1, SPHK2, TACR1, TACR2, TACR3, TBXA2R, TNNC1, TNNC2, TRHR, TRPC1, VDAC1, VDAC2, VDAC3 168 ADCY1(8), ADCY2(6), ADCY3(2), ADCY4(5), ADCY7(3), ADCY8(13), ADCY9(1), ADRA1A(2), ADRA1D(2), ADRB3(1), AGTR1(1), ATP2A1(2), ATP2A2(5), ATP2A3(1), ATP2B1(5), ATP2B2(8), ATP2B3(6), ATP2B4(6), AVPR1A(4), AVPR1B(1), CACNA1A(6), CACNA1B(9), CACNA1C(8), CACNA1D(7), CACNA1E(26), CACNA1F(5), CACNA1G(3), CACNA1H(5), CACNA1I(5), CACNA1S(5), CALM1(1), CALML3(2), CAMK2A(1), CAMK2D(1), CAMK2G(2), CAMK4(4), CCKAR(4), CCKBR(8), CD38(1), CHRM1(1), CHRM2(4), CHRM3(4), CHRNA7(2), CYSLTR2(1), DRD1(2), EDNRB(2), EGFR(24), ERBB2(5), ERBB3(1), ERBB4(12), F2R(2), GNAQ(2), GNAS(3), GRIN1(1), GRIN2A(19), GRIN2C(3), GRIN2D(5), GRM1(14), GRM5(9), GRPR(5), HRH1(4), HRH2(2), HTR2A(2), HTR2C(5), HTR5A(6), HTR6(3), ITPKA(1), ITPKB(4), ITPR1(7), ITPR2(15), ITPR3(4), LHCGR(3), MYLK(10), MYLK2(2), NOS1(5), NOS3(1), NTSR1(2), OXTR(1), P2RX2(3), P2RX4(1), P2RX5(2), P2RX7(2), PDE1A(5), PDE1B(6), PDE1C(11), PDGFRA(7), PDGFRB(6), PHKA1(3), PHKA2(6), PHKB(4), PHKG1(1), PHKG2(2), PLCB1(9), PLCB2(4), PLCB3(3), PLCB4(10), PLCD1(1), PLCD3(1), PLCD4(1), PLCE1(8), PLCG1(4), PLCG2(4), PLCZ1(2), PPP3CA(2), PPP3CB(1), PPP3CC(1), PPP3R1(2), PPP3R2(2), PRKACB(2), PRKACG(1), PRKCA(7), PRKCG(5), PRKX(3), PTAFR(2), PTGER3(1), PTGFR(5), PTK2B(6), RYR1(26), RYR2(89), RYR3(27), SLC25A5(1), SLC25A6(4), SLC8A1(17), SLC8A2(1), SLC8A3(3), SPHK2(1), TACR1(1), TACR3(2), TNNC2(2), TRPC1(7) 52607748 710 118 693 273 112 237 190 103 66 2 0.990 1.000 1.000 274 HSA04080_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION Genes involved in neuroactive ligand-receptor interaction ADCYAP1R1, ADORA1, ADORA2A, ADORA2B, ADORA3, ADRA1A, ADRA1B, ADRA2A, ADRA2B, ADRA2C, ADRB1, ADRB2, ADRB3, AGTR1, AGTR2, AGTRL1, AVPR1A, AVPR1B, AVPR2, BDKRB1, BDKRB2, BRS3, C3AR1, C5AR1, CALCR, CALCRL, CCKAR, CCKBR, CGA, CHRM1, CHRM2, CHRM3, CHRM4, CHRM5, CNR1, CNR2, CRHR1, CRHR2, CTSG, CYSLTR1, CYSLTR2, DRD1, DRD2, DRD3, DRD4, DRD5, EDG1, EDG2, EDG3, EDG4, EDG5, EDG6, EDG7, EDG8, EDNRA, EDNRB, F2, F2R, F2RL1, F2RL2, F2RL3, FPR1, FPRL1, FPRL2, FSHB, FSHR, GABBR1, GABBR2, GABRA1, GABRA2, GABRA3, GABRA4, GABRA5, GABRA6, GABRB1, GABRB2, GABRB3, GABRD, GABRE, GABRG1, GABRG2, GABRG3, GABRP, GABRQ, GABRR1, GABRR2, GALR1, GALR2, GALR3, GCGR, GH1, GH2, GHR, GHRHR, GHSR, GIPR, GLP1R, GLP2R, GLRA1, GLRA2, GLRA3, GLRB, GNRHR, GPR156, GPR23, GPR35, GPR50, GPR63, GPR83, GRIA1, GRIA2, GRIA3, GRIA4, GRID1, GRID2, GRIK1, GRIK2, GRIK3, GRIK4, GRIK5, GRIN1, GRIN2A, GRIN2B, GRIN2C, GRIN2D, GRIN3A, GRIN3B, GRM1, GRM2, GRM3, GRM4, GRM5, GRM6, GRM7, GRM8, GRPR, GZMA, HCRTR1, HCRTR2, HRH1, HRH2, HRH3, HRH4, HTR1A, HTR1B, HTR1D, HTR1E, HTR1F, HTR2A, HTR2B, HTR2C, HTR4, HTR5A, HTR6, HTR7, KISS1R, LEP, LEPR, LHB, LHCGR, LTB4R, LTB4R2, MAS1, MC1R, MC2R, MC3R, MC4R, MC5R, MCHR1, MCHR2, MLNR, MTNR1A, MTNR1B, NMBR, NMUR1, NMUR2, NPBWR1, NPBWR2, NPFFR1, NPFFR2, NPY1R, NPY2R, NPY5R, NR3C1, NTSR1, NTSR2, OPRD1, OPRK1, OPRL1, OPRM1, OXTR, P2RX1, P2RX2, P2RX3, P2RX4, P2RX5, P2RX7, P2RXL1, P2RY1, P2RY10, P2RY11, P2RY13, P2RY14, P2RY2, P2RY4, P2RY5, P2RY6, P2RY8, PARD3, PPYR1, PRL, PRLHR, PRLR, PRSS1, PRSS2, PRSS3, PTAFR, PTGDR, PTGER1, PTGER2, PTGER3, PTGER4, PTGFR, PTGIR, PTH2R, PTHR1, RXFP1, RXFP2, SCTR, SSTR1, SSTR2, SSTR3, SSTR4, SSTR5, TAAR1, TAAR2, TAAR5, TAAR6, TAAR8, TAAR9, TACR1, TACR2, TACR3, TBXA2R, THRA, THRB, TRHR, TRPV1, TSHB, TSHR, TSPO, UTS2R, VIPR1, VIPR2 236 ADCYAP1R1(3), ADORA1(1), ADORA3(1), ADRA1A(2), ADRA2A(1), ADRA2B(1), ADRA2C(1), ADRB3(1), AGTR1(1), AGTR2(2), AVPR1A(4), AVPR1B(1), AVPR2(3), BRS3(6), C3AR1(2), C5AR1(2), CALCR(4), CALCRL(5), CCKAR(4), CCKBR(8), CGA(1), CHRM1(1), CHRM2(4), CHRM3(4), CHRM4(2), CNR1(3), CNR2(1), CRHR1(1), CRHR2(2), CTSG(1), CYSLTR2(1), DRD1(2), DRD2(7), DRD3(7), DRD5(3), EDNRB(2), F2(5), F2R(2), F2RL1(1), F2RL2(2), F2RL3(2), FPR1(1), FSHB(1), FSHR(11), GABBR1(3), GABBR2(2), GABRA1(6), GABRA2(9), GABRA3(6), GABRA4(7), GABRA5(8), GABRA6(6), GABRB1(7), GABRB2(1), GABRB3(7), GABRE(3), GABRG1(6), GABRG2(9), GABRG3(6), GABRP(4), GABRQ(4), GABRR1(5), GABRR2(1), GALR1(2), GALR2(1), GH1(2), GH2(3), GHR(1), GHRHR(2), GHSR(2), GIPR(2), GLP2R(5), GLRA1(2), GLRA2(3), GLRA3(1), GLRB(2), GNRHR(2), GPR156(4), GPR50(5), GPR63(4), GPR83(3), GRIA1(8), GRIA2(7), GRIA3(5), GRIA4(3), GRID1(11), GRID2(7), GRIK1(5), GRIK2(9), GRIK3(7), GRIK4(7), GRIK5(2), GRIN1(1), GRIN2A(19), GRIN2B(13), GRIN2C(3), GRIN2D(5), GRIN3A(12), GRM1(14), GRM2(3), GRM3(4), GRM4(3), GRM5(9), GRM6(2), GRM7(8), GRM8(8), GRPR(5), GZMA(1), HCRTR2(7), HRH1(4), HRH2(2), HRH3(1), HRH4(3), HTR1A(8), HTR1B(2), HTR1E(4), HTR1F(3), HTR2A(2), HTR2C(5), HTR5A(6), HTR6(3), LEP(2), LEPR(8), LHB(1), LHCGR(3), LTB4R(2), MAS1(2), MC2R(1), MC3R(5), MC5R(5), MCHR2(4), MLNR(1), MTNR1A(3), MTNR1B(5), NMBR(3), NMUR1(3), NMUR2(6), NPBWR1(2), NPBWR2(2), NPFFR2(9), NPY1R(6), NPY2R(6), NPY5R(5), NR3C1(1), NTSR1(2), OPRK1(2), OPRL1(3), OPRM1(1), OXTR(1), P2RX2(3), P2RX4(1), P2RX5(2), P2RX7(2), P2RY1(5), P2RY10(5), P2RY14(1), P2RY4(1), P2RY6(1), P2RY8(1), PARD3(4), PPYR1(1), PRLHR(1), PRLR(7), PRSS1(10), PTAFR(2), PTGER2(1), PTGER3(1), PTGER4(4), PTGFR(5), PTGIR(1), PTH2R(7), RXFP1(5), RXFP2(4), SCTR(1), SSTR1(2), SSTR3(2), SSTR4(4), TAAR1(1), TAAR2(3), TAAR5(3), TAAR6(5), TAAR8(4), TAAR9(2), TACR1(1), TACR3(2), THRA(1), THRB(4), TRPV1(2), TSHR(2), UTS2R(1), VIPR2(2) 42936618 708 114 705 306 97 241 179 118 73 0 1.000 1.000 1.000 275 HSA01430_CELL_COMMUNICATION Genes involved in cell communication ACTB, ACTG1, CHAD, COL11A1, COL11A2, COL17A1, COL1A1, COL1A2, COL2A1, COL3A1, COL4A1, COL4A2, COL4A4, COL4A6, COL5A1, COL5A2, COL5A3, COL6A1, COL6A2, COL6A3, COL6A6, COMP, DES, DSC1, DSC2, DSC3, DSG1, DSG2, DSG3, DSG4, FN1, GJA1, GJA10, GJA3, GJA4, GJA5, GJA8, GJA9, GJB1, GJB2, GJB3, GJB4, GJB5, GJB6, GJB7, GJC1, GJC2, GJC3, GJD2, GJD3, GJD4, IBSP, INA, ITGA6, ITGB4, KRT1, KRT10, KRT12, KRT13, KRT14, KRT15, KRT16, KRT17, KRT18, KRT19, KRT2, KRT20, KRT23, KRT24, KRT25, KRT27, KRT28, KRT3, KRT31, KRT32, KRT33A, KRT33B, KRT34, KRT35, KRT36, KRT37, KRT38, KRT39, KRT4, KRT40, KRT5, KRT6A, KRT6B, KRT6C, KRT7, KRT71, KRT72, KRT73, KRT74, KRT75, KRT76, KRT77, KRT78, KRT79, KRT8, KRT81, KRT82, KRT83, KRT84, KRT85, KRT86, KRT9, LAMA1, LAMA2, LAMA3, LAMA4, LAMA5, LAMB1, LAMB2, LAMB3, LAMB4, LAMC1, LAMC2, LAMC3, LMNA, LMNB1, LMNB2, LOC728760, NES, PRPH, RELN, SPP1, THBS1, THBS2, THBS3, THBS4, TNC, TNN, TNR, TNXB, VIM, VTN, VWF 136 ACTG1(2), CHAD(1), COL11A1(35), COL11A2(1), COL17A1(5), COL1A1(2), COL1A2(8), COL2A1(2), COL3A1(24), COL4A1(7), COL4A2(9), COL4A4(8), COL4A6(9), COL5A1(14), COL5A2(17), COL5A3(4), COL6A1(2), COL6A2(3), COL6A3(21), COL6A6(11), COMP(1), DSC1(4), DSC2(3), DSC3(5), DSG1(5), DSG2(8), DSG3(9), DSG4(9), FN1(4), GJA1(2), GJA10(2), GJA5(1), GJA8(4), GJA9(1), GJB1(3), GJB3(1), GJB4(2), GJC1(2), GJD2(1), GJD4(1), IBSP(1), ITGA6(3), ITGB4(3), KRT1(1), KRT12(1), KRT13(4), KRT15(1), KRT16(2), KRT17(2), KRT18(1), KRT19(1), KRT2(6), KRT20(2), KRT23(1), KRT24(2), KRT25(2), KRT28(4), KRT3(2), KRT31(2), KRT33A(1), KRT33B(2), KRT34(2), KRT35(2), KRT36(2), KRT37(1), KRT38(5), KRT39(3), KRT4(1), KRT40(1), KRT5(3), KRT6A(4), KRT6B(8), KRT6C(1), KRT7(3), KRT71(3), KRT73(7), KRT74(4), KRT75(5), KRT76(2), KRT78(1), KRT79(3), KRT81(1), KRT82(5), KRT83(1), KRT84(3), KRT85(1), KRT86(3), LAMA1(14), LAMA2(16), LAMA3(22), LAMA4(7), LAMA5(7), LAMB1(12), LAMB2(8), LAMB3(4), LAMB4(14), LAMC1(8), LAMC2(8), LAMC3(9), LMNB1(1), LMNB2(1), NES(3), RELN(28), THBS1(4), THBS2(12), THBS3(1), THBS4(4), TNC(9), TNN(18), TNR(19), TNXB(6), VIM(2), VTN(2), VWF(7) 48347136 618 107 615 234 98 216 145 64 92 3 0.999 1.000 1.000 276 HSA04540_GAP_JUNCTION Genes involved in gap junction ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, ADRB1, CDC2, CSNK1D, DRD1, DRD2, EDG2, EGF, EGFR, GJA1, GJD2, GNA11, GNAI1, GNAI2, GNAI3, GNAQ, GNAS, GRB2, GRM1, GRM5, GUCY1A2, GUCY1A3, GUCY1B3, GUCY2C, GUCY2D, GUCY2F, HRAS, HTR2A, HTR2B, HTR2C, ITPR1, ITPR2, ITPR3, KRAS, LOC643224, LOC654264, MAP2K1, MAP2K2, MAP2K5, MAP3K2, MAPK1, MAPK3, MAPK7, NPR1, NPR2, NRAS, PDGFA, PDGFB, PDGFC, PDGFD, PDGFRA, PDGFRB, PLCB1, PLCB2, PLCB3, PLCB4, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCG, PRKG1, PRKG2, PRKX, PRKY, RAF1, SOS1, SOS2, SRC, TJP1, TUBA1A, TUBA1B, TUBA1C, TUBA3C, TUBA3D, TUBA3E, TUBA4A, TUBA8, TUBAL3, TUBB, TUBB1, TUBB2A, TUBB2B, TUBB2C, TUBB3, TUBB4, TUBB4Q, TUBB6, TUBB8 92 ADCY1(8), ADCY2(6), ADCY3(2), ADCY4(5), ADCY5(5), ADCY6(5), ADCY7(3), ADCY8(13), ADCY9(1), CSNK1D(1), DRD1(2), DRD2(7), EGF(7), EGFR(24), GJA1(2), GJD2(1), GNAI1(1), GNAI3(1), GNAQ(2), GNAS(3), GRB2(3), GRM1(14), GRM5(9), GUCY1A2(3), GUCY1A3(6), GUCY1B3(2), GUCY2C(4), GUCY2F(8), HRAS(1), HTR2A(2), HTR2C(5), ITPR1(7), ITPR2(15), ITPR3(4), KRAS(35), MAP2K1(4), MAP3K2(4), MAPK3(1), MAPK7(4), NPR1(3), NPR2(2), NRAS(1), PDGFA(6), PDGFD(3), PDGFRA(7), PDGFRB(6), PLCB1(9), PLCB2(4), PLCB3(3), PLCB4(10), PRKACB(2), PRKACG(1), PRKCA(7), PRKCG(5), PRKG1(1), PRKG2(4), PRKX(3), RAF1(2), SOS1(9), SOS2(5), SRC(2), TJP1(4), TUBA1A(2), TUBA1B(1), TUBA1C(2), TUBA3C(6), TUBA3D(6), TUBA3E(1), TUBA4A(2), TUBB1(2), TUBB2B(1), TUBB2C(3), TUBB4(3), TUBB4Q(5), TUBB8(3) 25679514 366 107 323 128 58 138 88 52 30 0 0.894 1.000 1.000 277 HSA04310_WNT_SIGNALING_PATHWAY Genes involved in Wnt signaling pathway APC, APC2, AXIN1, AXIN2, BTRC, CACYBP, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CCND1, CCND2, CCND3, CER1, CHD8, CHP, CREBBP, CSNK1A1, CSNK1A1L, CSNK1E, CSNK2A1, CSNK2A2, CSNK2B, CTBP1, CTBP2, CTNNB1, CTNNBIP1, CUL1, CXXC4, DAAM1, DAAM2, DKK1, DKK2, DKK4, DVL1, DVL2, DVL3, EP300, FBXW11, FOSL1, FRAT1, FRAT2, FZD1, FZD10, FZD2, FZD3, FZD4, FZD5, FZD6, FZD7, FZD8, FZD9, GSK3B, JUN, LEF1, LOC652788, LRP5, LRP6, MAP3K7, MAPK10, MAPK8, MAPK9, MMP7, MYC, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NKD1, NKD2, NLK, PLCB1, PLCB2, PLCB3, PLCB4, PORCN, PPARD, PPP2CA, PPP2CB, PPP2R1A, PPP2R1B, PPP2R2A, PPP2R2B, PPP2R2C, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRICKLE1, PRICKLE2, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCG, PRKX, PRKY, PSEN1, RAC1, RAC2, RAC3, RBX1, RHOA, ROCK1, ROCK2, RUVBL1, SENP2, SFRP1, SFRP2, SFRP4, SFRP5, SIAH1, SKP1, SMAD2, SMAD3, SMAD4, SOX17, TBL1X, TBL1XR1, TBL1Y, TCF7, TCF7L1, TCF7L2, TP53, VANGL1, VANGL2, WIF1, WNT1, WNT10A, WNT10B, WNT11, WNT16, WNT2, WNT2B, WNT3, WNT3A, WNT4, WNT5A, WNT5B, WNT6, WNT7A, WNT7B, WNT8A, WNT8B, WNT9A, WNT9B 144 APC(6), APC2(1), AXIN1(2), AXIN2(2), BTRC(5), CAMK2A(1), CAMK2D(1), CAMK2G(2), CCND1(2), CCND3(1), CER1(1), CHD8(8), CREBBP(2), CSNK1A1(1), CSNK1A1L(3), CSNK1E(2), CTNNB1(9), CUL1(3), CXXC4(2), DAAM1(2), DAAM2(3), DKK1(1), DKK2(3), DKK4(1), DVL2(1), DVL3(2), EP300(1), FOSL1(2), FZD1(2), FZD10(5), FZD2(1), FZD3(3), FZD4(3), FZD7(1), FZD9(1), GSK3B(1), LEF1(6), LRP5(3), LRP6(9), MAP3K7(3), MAPK10(1), MAPK8(3), MAPK9(5), MMP7(2), NFAT5(4), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), NKD1(4), NKD2(2), PLCB1(9), PLCB2(4), PLCB3(3), PLCB4(10), PORCN(2), PPARD(1), PPP2CB(2), PPP2R1A(3), PPP2R1B(1), PPP2R2A(3), PPP2R2B(4), PPP2R2C(3), PPP3CA(2), PPP3CB(1), PPP3CC(1), PPP3R1(2), PPP3R2(2), PRICKLE1(2), PRICKLE2(1), PRKACB(2), PRKACG(1), PRKCA(7), PRKCG(5), PRKX(3), PSEN1(1), RHOA(1), ROCK1(7), ROCK2(3), RUVBL1(2), SENP2(3), SFRP4(1), SKP1(1), SMAD2(2), SMAD3(3), SMAD4(6), SOX17(1), TBL1XR1(2), TCF7(1), TCF7L1(1), TCF7L2(2), TP53(65), VANGL1(3), VANGL2(2), WNT1(3), WNT10A(2), WNT10B(2), WNT11(1), WNT16(2), WNT2(2), WNT3A(2), WNT4(1), WNT5A(1), WNT5B(1), WNT6(1), WNT7A(4), WNT7B(2), WNT8A(1), WNT8B(1), WNT9A(2), WNT9B(2) 31468518 355 106 343 99 71 74 100 48 62 0 0.122 1.000 1.000 278 HSA04012_ERBB_SIGNALING_PATHWAY Genes involved in ErbB signaling pathway ABL1, ABL2, AKT1, AKT2, AKT3, ARAF, AREG, BAD, BRAF, BTC, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CBL, CBLB, CBLC, CDKN1A, CDKN1B, CRK, CRKL, EGF, EGFR, EIF4EBP1, ELK1, ERBB2, ERBB3, ERBB4, EREG, FRAP1, GAB1, GRB2, GSK3B, HBEGF, HRAS, JUN, KRAS, MAP2K1, MAP2K2, MAP2K4, MAP2K7, MAPK1, MAPK10, MAPK3, MAPK8, MAPK9, MYC, NCK1, NCK2, NRAS, NRG1, NRG2, NRG3, NRG4, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLCG1, PLCG2, PRKCA, PRKCB1, PRKCG, PTK2, RAF1, RPS6KB1, RPS6KB2, SHC1, SHC2, SHC3, SHC4, SOS1, SOS2, SRC, STAT5A, STAT5B, TGFA 85 ABL1(1), ABL2(5), AKT2(1), AKT3(2), ARAF(3), BRAF(13), BTC(1), CAMK2A(1), CAMK2D(1), CAMK2G(2), CBL(7), CBLB(2), CDKN1B(2), CRKL(2), EGF(7), EGFR(24), ERBB2(5), ERBB3(1), ERBB4(12), EREG(3), GAB1(2), GRB2(3), GSK3B(1), HRAS(1), KRAS(35), MAP2K1(4), MAP2K4(2), MAP2K7(1), MAPK10(1), MAPK3(1), MAPK8(3), MAPK9(5), NCK1(1), NCK2(3), NRAS(1), NRG1(6), NRG2(2), NRG3(10), NRG4(1), PAK1(5), PAK2(3), PAK3(2), PAK4(1), PAK7(15), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PLCG1(4), PLCG2(4), PRKCA(7), PRKCG(5), PTK2(7), RAF1(2), RPS6KB2(1), SHC1(2), SHC2(1), SHC3(2), SHC4(4), SOS1(9), SOS2(5), SRC(2), STAT5A(2), STAT5B(3), TGFA(1) 19963008 285 105 237 71 47 98 56 43 41 0 0.0944 1.000 1.000 279 HSA04360_AXON_GUIDANCE Genes involved in axon guidance ABL1, ABLIM1, ABLIM2, ABLIM3, ARHGEF12, CDC42, CDK5, CFL1, CFL2, CHP, CXCL12, CXCR4, DCC, DPYSL2, DPYSL5, EFNA1, EFNA2, EFNA3, EFNA4, EFNA5, EFNB1, EFNB2, EFNB3, EPHA1, EPHA2, EPHA3, EPHA4, EPHA5, EPHA6, EPHA7, EPHA8, EPHB1, EPHB2, EPHB3, EPHB4, EPHB6, FES, FYN, GNAI1, GNAI2, GNAI3, GSK3B, HRAS, ITGB1, KRAS, L1CAM, LIMK1, LIMK2, LRRC4C, MAPK1, MAPK3, MET, NCK1, NCK2, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NGEF, NRAS, NRP1, NTN1, NTN2L, NTN4, NTNG1, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PLXNA1, PLXNA2, PLXNA3, PLXNB1, PLXNB2, PLXNB3, PLXNC1, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PTK2, RAC1, RAC2, RAC3, RASA1, RGS3, RHOA, RHOD, RND1, ROBO1, ROBO2, ROBO3, ROCK1, ROCK2, SEMA3A, SEMA3B, SEMA3C, SEMA3D, SEMA3E, SEMA3F, SEMA3G, SEMA4A, SEMA4B, SEMA4C, SEMA4D, SEMA4F, SEMA4G, SEMA5A, SEMA5B, SEMA6A, SEMA6B, SEMA6C, SEMA6D, SEMA7A, SLIT1, SLIT2, SLIT3, SRGAP1, SRGAP2, SRGAP3, UNC5A, UNC5B, UNC5C, UNC5D 127 ABL1(1), ABLIM1(4), ABLIM2(2), ABLIM3(3), ARHGEF12(5), CDC42(2), CDK5(1), CFL2(1), CXCR4(3), DCC(10), DPYSL2(1), DPYSL5(2), EFNB2(1), EPHA1(8), EPHA2(1), EPHA3(15), EPHA4(4), EPHA5(13), EPHA6(18), EPHA7(12), EPHA8(4), EPHB1(17), EPHB2(4), EPHB3(2), EPHB4(6), EPHB6(16), FES(1), FYN(2), GNAI1(1), GNAI3(1), GSK3B(1), HRAS(1), ITGB1(2), KRAS(35), L1CAM(7), LIMK2(1), LRRC4C(6), MAPK3(1), MET(10), NCK1(1), NCK2(3), NFAT5(4), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), NGEF(2), NRAS(1), NRP1(2), NTN4(4), NTNG1(4), PAK1(5), PAK2(3), PAK3(2), PAK4(1), PAK7(15), PLXNA1(3), PLXNA2(10), PLXNA3(5), PLXNB1(3), PLXNB2(5), PLXNB3(2), PLXNC1(9), PPP3CA(2), PPP3CB(1), PPP3CC(1), PPP3R1(2), PPP3R2(2), PTK2(7), RASA1(1), RGS3(4), RHOA(1), RHOD(1), ROBO1(9), ROBO2(12), ROBO3(6), ROCK1(7), ROCK2(3), SEMA3A(11), SEMA3B(2), SEMA3C(4), SEMA3D(14), SEMA3E(3), SEMA3F(3), SEMA3G(2), SEMA4A(2), SEMA4C(1), SEMA4D(3), SEMA4F(3), SEMA4G(2), SEMA5A(7), SEMA5B(4), SEMA6A(5), SEMA6B(3), SEMA6C(5), SEMA6D(15), SEMA7A(5), SLIT1(11), SLIT2(13), SLIT3(8), SRGAP1(5), SRGAP2(3), SRGAP3(4), UNC5A(3), UNC5B(7), UNC5C(8), UNC5D(8) 38425488 547 105 515 169 90 193 127 67 70 0 0.500 1.000 1.000 280 HSA04512_ECM_RECEPTOR_INTERACTION Genes involved in ECM-receptor interaction AGRN, CD36, CD44, CD47, CHAD, COL11A1, COL11A2, COL1A1, COL1A2, COL2A1, COL3A1, COL4A1, COL4A2, COL4A4, COL4A6, COL5A1, COL5A2, COL5A3, COL6A1, COL6A2, COL6A3, COL6A6, DAG1, FN1, FNDC1, FNDC3A, FNDC4, FNDC5, GP1BA, GP1BB, GP5, GP6, GP9, HMMR, HSPG2, IBSP, ITGA1, ITGA10, ITGA11, ITGA2, ITGA2B, ITGA3, ITGA4, ITGA5, ITGA6, ITGA7, ITGA8, ITGA9, ITGAV, ITGB1, ITGB3, ITGB4, ITGB5, ITGB6, ITGB7, ITGB8, LAMA1, LAMA2, LAMA3, LAMA4, LAMA5, LAMB1, LAMB2, LAMB3, LAMB4, LAMC1, LAMC2, LAMC3, RELN, SDC1, SDC2, SDC3, SDC4, SPP1, SV2A, SV2B, SV2C, THBS1, THBS2, THBS3, THBS4, TNC, TNN, TNR, TNXB, VTN, VWF 85 AGRN(2), CD36(3), CD44(1), CD47(1), CHAD(1), COL11A1(35), COL11A2(1), COL1A1(2), COL1A2(8), COL2A1(2), COL3A1(24), COL4A1(7), COL4A2(9), COL4A4(8), COL4A6(9), COL5A1(14), COL5A2(17), COL5A3(4), COL6A1(2), COL6A2(3), COL6A3(21), COL6A6(11), DAG1(2), FN1(4), FNDC1(7), FNDC3A(6), GP5(2), GP6(1), HMMR(2), HSPG2(11), IBSP(1), ITGA1(5), ITGA10(2), ITGA11(5), ITGA2(4), ITGA2B(3), ITGA3(1), ITGA4(11), ITGA5(4), ITGA6(3), ITGA7(2), ITGA8(15), ITGA9(1), ITGAV(5), ITGB1(2), ITGB3(2), ITGB4(3), ITGB5(6), ITGB6(1), ITGB7(1), ITGB8(1), LAMA1(14), LAMA2(16), LAMA3(22), LAMA4(7), LAMA5(7), LAMB1(12), LAMB2(8), LAMB3(4), LAMB4(14), LAMC1(8), LAMC2(8), LAMC3(9), RELN(28), SDC1(2), SDC3(1), SV2A(3), SV2B(4), SV2C(7), THBS1(4), THBS2(12), THBS3(1), THBS4(4), TNC(9), TNN(18), TNR(19), TNXB(6), VTN(2), VWF(7) 43848906 554 105 551 207 86 196 121 66 82 3 0.998 1.000 1.000 281 HSA04530_TIGHT_JUNCTION Genes involved in tight junction ACTB, ACTG1, ACTN1, ACTN2, ACTN3, ACTN4, AKT1, AKT2, AKT3, AMOTL1, ASH1L, CASK, CDC42, CDK4, CGN, CLDN1, CLDN10, CLDN11, CLDN14, CLDN15, CLDN16, CLDN17, CLDN18, CLDN19, CLDN2, CLDN20, CLDN22, CLDN23, CLDN3, CLDN4, CLDN5, CLDN6, CLDN7, CLDN8, CLDN9, CRB3, CSDA, CSNK2A1, CSNK2A2, CSNK2B, CTNNA1, CTNNA2, CTNNA3, CTNNB1, CTTN, EPB41, EPB41L1, EPB41L2, EPB41L3, EXOC3, EXOC4, F11R, GNAI1, GNAI2, GNAI3, HCLS1, HRAS, IGSF5, INADL, JAM2, JAM3, KRAS, LLGL1, LLGL2, MAGI1, MAGI2, MAGI3, MLLT4, MPDZ, MPP5, MRAS, MRCL3, MRLC2, MYH1, MYH10, MYH11, MYH13, MYH14, MYH15, MYH2, MYH3, MYH4, MYH6, MYH7, MYH7B, MYH8, MYH9, MYL2, MYL5, MYL7, MYL8P, MYL9, MYLC2PL, MYLPF, NRAS, OCLN, PARD3, PARD6A, PARD6B, PARD6G, PPM1J, PPP2CA, PPP2CB, PPP2R1A, PPP2R1B, PPP2R2A, PPP2R2B, PPP2R2C, PPP2R3A, PPP2R3B, PPP2R4, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCG, PRKCH, PRKCI, PRKCQ, PRKCZ, PTEN, RAB13, RAB3B, RHOA, RRAS, RRAS2, SPTAN1, SRC, SYMPK, TJAP1, TJP1, TJP2, TJP3, VAPA, YES1, ZAK 130 ACTG1(2), ACTN2(14), ACTN3(2), ACTN4(1), AKT2(1), AKT3(2), AMOTL1(5), ASH1L(15), CASK(1), CDC42(2), CDK4(2), CGN(4), CLDN1(3), CLDN10(1), CLDN11(2), CLDN14(1), CLDN15(1), CLDN17(1), CLDN18(3), CLDN2(1), CLDN20(1), CLDN4(1), CLDN8(3), CSDA(2), CTNNA1(2), CTNNA2(15), CTNNA3(11), CTNNB1(9), CTTN(2), EPB41(1), EPB41L1(3), EPB41L2(7), EPB41L3(12), EXOC3(2), EXOC4(3), F11R(1), GNAI1(1), GNAI3(1), HCLS1(5), HRAS(1), IGSF5(2), INADL(20), JAM2(5), KRAS(35), LLGL1(1), LLGL2(2), MAGI1(10), MAGI2(9), MAGI3(3), MLLT4(3), MPDZ(5), MPP5(1), MRAS(1), MYH1(17), MYH10(4), MYH11(10), MYH13(10), MYH14(2), MYH15(10), MYH2(20), MYH3(6), MYH4(11), MYH6(12), MYH7(14), MYH7B(4), MYH8(15), MYH9(4), MYL2(2), MYL5(1), MYL7(1), MYLPF(1), NRAS(1), PARD3(4), PARD6B(1), PPM1J(1), PPP2CB(2), PPP2R1A(3), PPP2R1B(1), PPP2R2A(3), PPP2R2B(4), PPP2R2C(3), PPP2R3A(1), PPP2R3B(4), PRKCA(7), PRKCD(1), PRKCE(1), PRKCG(5), PRKCH(2), PRKCI(5), PRKCQ(3), PTEN(3), RAB13(1), RAB3B(1), RHOA(1), RRAS2(1), SPTAN1(7), SRC(2), SYMPK(5), TJAP1(1), TJP1(4), TJP2(4), TJP3(2), YES1(2), ZAK(1) 37696380 475 105 441 162 93 160 114 62 45 1 0.849 1.000 1.000 282 HSA04912_GNRH_SIGNALING_PATHWAY Genes involved in GnRH signaling pathway ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, ATF4, CACNA1C, CACNA1D, CACNA1F, CACNA1S, CALM1, CALM2, CALM3, CALML3, CALML6, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CDC42, CGA, EGFR, ELK1, FSHB, GNA11, GNAQ, GNAS, GNRH1, GNRH2, GNRHR, GRB2, HBEGF, HRAS, ITPR1, ITPR2, ITPR3, JUN, KRAS, LHB, MAP2K1, MAP2K2, MAP2K3, MAP2K4, MAP2K6, MAP2K7, MAP3K1, MAP3K2, MAP3K3, MAP3K4, MAPK1, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPK7, MAPK8, MAPK9, MMP14, MMP2, NRAS, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLCB1, PLCB2, PLCB3, PLCB4, PLD1, PLD2, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCD, PRKX, PRKY, PTK2B, RAF1, SOS1, SOS2, SRC 95 ADCY1(8), ADCY2(6), ADCY3(2), ADCY4(5), ADCY5(5), ADCY6(5), ADCY7(3), ADCY8(13), ADCY9(1), CACNA1C(8), CACNA1D(7), CACNA1F(5), CACNA1S(5), CALM1(1), CALML3(2), CAMK2A(1), CAMK2D(1), CAMK2G(2), CDC42(2), CGA(1), EGFR(24), FSHB(1), GNAQ(2), GNAS(3), GNRHR(2), GRB2(3), HRAS(1), ITPR1(7), ITPR2(15), ITPR3(4), KRAS(35), LHB(1), MAP2K1(4), MAP2K3(3), MAP2K4(2), MAP2K7(1), MAP3K1(3), MAP3K2(4), MAP3K3(2), MAP3K4(8), MAPK10(1), MAPK14(1), MAPK3(1), MAPK7(4), MAPK8(3), MAPK9(5), MMP14(2), MMP2(6), NRAS(1), PLA2G10(1), PLA2G12B(1), PLA2G1B(1), PLA2G2A(3), PLA2G2E(1), PLA2G2F(1), PLA2G3(4), PLA2G4A(5), PLA2G6(1), PLCB1(9), PLCB2(4), PLCB3(3), PLCB4(10), PLD1(7), PLD2(3), PRKACB(2), PRKACG(1), PRKCA(7), PRKCD(1), PRKX(3), PTK2B(6), RAF1(2), SOS1(9), SOS2(5), SRC(2) 24821793 324 105 281 95 63 104 79 47 31 0 0.335 1.000 1.000 283 HSA04060_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION Genes involved in cytokine-cytokine receptor interaction ACVR1, ACVR1B, ACVR2A, ACVR2B, AMH, AMHR2, BMP2, BMP7, BMPR1A, BMPR1B, BMPR2, CCL1, CCL11, CCL13, CCL14, CCL15, CCL16, CCL17, CCL18, CCL19, CCL2, CCL20, CCL21, CCL22, CCL23, CCL24, CCL25, CCL26, CCL27, CCL28, CCL3, CCL4, CCL5, CCL7, CCL8, CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CD27, CD40, CD40LG, CD70, CLCF1, CNTF, CNTFR, CRLF2, CSF1, CSF1R, CSF2, CSF2RA, CSF2RB, CSF3, CSF3R, CTF1, CX3CL1, CX3CR1, CXCL1, CXCL10, CXCL11, CXCL12, CXCL13, CXCL14, CXCL16, CXCL2, CXCL3, CXCL5, CXCL6, CXCL9, CXCR3, CXCR4, CXCR6, EDA, EDA2R, EDAR, EGF, EGFR, EPO, EPOR, FAS, FASLG, FLJ78302, FLT1, FLT3, FLT3LG, FLT4, GDF5, GH1, GH2, GHR, HGF, IFNA1, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA2, IFNA21, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, IFNAR1, IFNAR2, IFNB1, IFNE1, IFNG, IFNGR1, IFNGR2, IFNK, IFNW1, IL10, IL10RA, IL10RB, IL11, IL11RA, IL12A, IL12B, IL12RB1, IL12RB2, IL13, IL13RA1, IL15, IL15RA, IL17A, IL17B, IL17RA, IL17RB, IL18, IL18R1, IL18RAP, IL19, IL1A, IL1B, IL1R1, IL1R2, IL1RAP, IL2, IL20, IL20RA, IL21, IL21R, IL22, IL22RA1, IL22RA2, IL23A, IL23R, IL24, IL25, IL26, IL28A, IL28B, IL28RA, IL29, IL2RA, IL2RB, IL2RG, IL3, IL3RA, IL4, IL4R, IL5, IL5RA, IL6, IL6R, IL6ST, IL7, IL7R, IL8, IL8RA, IL8RB, IL9, IL9R, INHBA, INHBB, INHBC, INHBE, KDR, KIT, KITLG, LEP, LEPR, LIF, LIFR, LOC728045, LTA, LTB, LTBR, MET, MPL, NGFR, OSM, OSMR, PDGFB, PDGFC, PDGFRA, PDGFRB, PF4, PF4V1, PLEKHO2, PPBP, PRL, PRLR, RELT, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, TNF, TNFRSF10A, TNFRSF10B, TNFRSF10C, TNFRSF10D, TNFRSF11A, TNFRSF11B, TNFRSF12A, TNFRSF13B, TNFRSF13C, TNFRSF14, TNFRSF17, TNFRSF18, TNFRSF19, TNFRSF1A, TNFRSF1B, TNFRSF21, TNFRSF25, TNFRSF4, TNFRSF6B, TNFRSF8, TNFRSF9, TNFSF10, TNFSF11, TNFSF12, TNFSF13, TNFSF13B, TNFSF14, TNFSF15, TNFSF18, TNFSF4, TNFSF8, TNFSF9, TPO, TSLP, VEGFA, VEGFB, VEGFC, XCL1, XCL2, XCR1 250 ACVR1(2), ACVR1B(4), ACVR2A(1), ACVR2B(3), AMH(1), BMP2(1), BMP7(3), BMPR1A(1), BMPR1B(3), BMPR2(2), CCL15(3), CCL28(1), CCL3(1), CCL4(1), CCL7(1), CCR1(1), CCR2(5), CCR3(1), CCR4(1), CCR5(1), CCR6(1), CCR8(5), CD40LG(4), CNTFR(1), CSF1(1), CSF1R(3), CSF2RA(5), CSF2RB(3), CSF3R(3), CX3CL1(1), CX3CR1(5), CXCL1(2), CXCL16(1), CXCL5(1), CXCL6(3), CXCL9(2), CXCR3(1), CXCR4(3), CXCR6(1), EDA(2), EDA2R(1), EDAR(1), EGF(7), EGFR(24), EPO(1), FAS(2), FASLG(2), FLT1(12), FLT3(7), FLT3LG(1), FLT4(8), GDF5(3), GH1(2), GH2(3), GHR(1), HGF(18), IFNA10(1), IFNA14(3), IFNA16(1), IFNA17(1), IFNA2(3), IFNA21(1), IFNA4(1), IFNA6(2), IFNA7(3), IFNA8(1), IFNAR2(1), IFNB1(3), IFNG(3), IFNGR1(3), IFNGR2(2), IFNW1(1), IL10RA(3), IL10RB(2), IL12A(2), IL12RB1(2), IL12RB2(6), IL15(1), IL15RA(1), IL17A(2), IL17B(2), IL17RA(2), IL18RAP(3), IL1A(2), IL1R2(4), IL1RAP(2), IL2(3), IL20RA(1), IL21R(7), IL22(2), IL22RA2(1), IL23R(1), IL24(3), IL25(1), IL28B(2), IL28RA(2), IL2RA(3), IL2RB(4), IL3(1), IL3RA(4), IL4R(5), IL5RA(1), IL6R(5), IL7R(6), IL9R(2), INHBA(7), INHBB(1), INHBC(1), INHBE(2), KDR(16), KIT(3), LEP(2), LEPR(8), LIF(2), LIFR(5), MET(10), MPL(1), NGFR(2), OSM(2), OSMR(4), PDGFRA(7), PDGFRB(6), PLEKHO2(2), PRLR(7), TGFB1(2), TGFB2(5), TGFB3(1), TGFBR1(2), TNFRSF10B(1), TNFRSF10C(1), TNFRSF11A(4), TNFRSF11B(1), TNFRSF13B(1), TNFRSF18(1), TNFRSF19(1), TNFRSF1B(1), TNFRSF21(2), TNFRSF25(1), TNFRSF4(1), TNFRSF8(1), TNFRSF9(2), TNFSF10(1), TNFSF11(1), TNFSF13B(1), TNFSF15(1), TNFSF4(1), TPO(9), TSLP(3), VEGFA(1), VEGFC(6), XCL1(3), XCL2(4), XCR1(1) 34459383 444 104 432 140 50 145 101 88 60 0 0.747 1.000 1.000 284 CALCIUM_REGULATION_IN_CARDIAC_CELLS ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, ADRA1A, ADRA1B, ADRA1D, ADRB1, ADRB2, ADRB3, ANXA6, ARRB1, ARRB2, ATP1A4, ATP1B1, ATP1B2, ATP1B3, ATP2A2, ATP2A3, ATP2B1, ATP2B2, ATP2B3, CACNA1A, CACNA1B, CACNA1C, CACNA1D, CACNA1E, CACNA1S, CACNB1, CACNB3, CALM1, CALM2, CALM3, CALR, CAMK1, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CAMK4, CASQ1, CASQ2, CHRM1, CHRM2, CHRM3, CHRM4, CHRM5, FXYD2, GJA1, GJA12, GJA4, GJA5, GJB1, GJB2, GJB3, GJB4, GJB5, GJB6, GNA11, GNAI2, GNAI3, GNAO1, GNAQ, GNAZ, GNB1, GNB2, GNB3, GNB4, GNB5, GNG12, GNG13, GNG2, GNG3, GNG4, GNG5, GNG7, GNGT1, GRK4, GRK5, GRK6, ITPR1, ITPR2, ITPR3, KCNB1, KCNJ3, KCNJ5, MGC11266, MYCBP, NME7, PEA15, PKIA, PKIB, PKIG, PLCB3, PLN, PRKACA, PRKACB, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCG, PRKCH, PRKCQ, PRKCZ, PRKD1, RGS1, RGS10, RGS11, RGS14, RGS16, RGS17, RGS18, RGS19, RGS2, RGS20, RGS3, RGS4, RGS5, RGS6, RGS7, RGS9, RYR1, RYR2, RYR3, SARA1, SFN, SLC8A1, SLC8A3, USP5, YWHAB, YWHAH, YWHAQ, YWHAQ, MIB1 139 ADCY1(8), ADCY2(6), ADCY3(2), ADCY4(5), ADCY5(5), ADCY6(5), ADCY7(3), ADCY8(13), ADCY9(1), ADRA1A(2), ADRA1D(2), ADRB3(1), ARRB1(1), ARRB2(1), ATP1A4(9), ATP1B3(1), ATP2A2(5), ATP2A3(1), ATP2B1(5), ATP2B2(8), ATP2B3(6), CACNA1A(6), CACNA1B(9), CACNA1C(8), CACNA1D(7), CACNA1E(26), CACNA1S(5), CACNB1(1), CALM1(1), CALR(1), CAMK1(2), CAMK2A(1), CAMK2D(1), CAMK2G(2), CAMK4(4), CASQ1(2), CASQ2(2), CHRM1(1), CHRM2(4), CHRM3(4), CHRM4(2), FXYD2(1), GJA1(2), GJA5(1), GJB1(3), GJB3(1), GJB4(2), GNAI3(1), GNAO1(2), GNAQ(2), GNAZ(1), GNB1(1), GNB3(2), GNB4(1), GNB5(1), GNG12(2), GNG2(3), GNG3(2), GNGT1(1), GRK4(1), GRK5(6), GRK6(1), ITPR1(7), ITPR2(15), ITPR3(4), KCNB1(8), KCNJ3(10), MIB1(5), NME7(3), PEA15(2), PLCB3(3), PRKACB(2), PRKAR1B(4), PRKCA(7), PRKCD(1), PRKCE(1), PRKCG(5), PRKCH(2), PRKCQ(3), PRKD1(8), RGS1(4), RGS11(1), RGS16(1), RGS18(2), RGS2(1), RGS20(2), RGS3(4), RGS4(3), RGS5(4), RGS6(1), RGS7(7), RGS9(3), RYR1(26), RYR2(89), RYR3(27), SLC8A1(17), SLC8A3(3), USP5(2) 36804603 503 103 499 186 82 181 136 58 44 2 0.928 1.000 1.000 285 HSA04720_LONG_TERM_POTENTIATION Genes involved in long-term potentiation ADCY1, ADCY8, ARAF, ATF4, BRAF, CACNA1C, CALM1, CALM2, CALM3, CALML3, CALML6, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CAMK4, CHP, CREBBP, EP300, GNAQ, GRIA1, GRIA2, GRIN1, GRIN2A, GRIN2B, GRIN2C, GRIN2D, GRM1, GRM5, HRAS, ITPR1, ITPR2, ITPR3, KRAS, MAP2K1, MAP2K2, MAPK1, MAPK3, NRAS, PLCB1, PLCB2, PLCB3, PLCB4, PPP1CA, PPP1CB, PPP1CC, PPP1R12A, PPP1R1A, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCG, PRKX, PRKY, RAF1, RAP1A, RAP1B, RAPGEF3, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA6 67 ADCY1(8), ADCY8(13), ARAF(3), BRAF(13), CACNA1C(8), CALM1(1), CALML3(2), CAMK2A(1), CAMK2D(1), CAMK2G(2), CAMK4(4), CREBBP(2), EP300(1), GNAQ(2), GRIA1(8), GRIA2(7), GRIN1(1), GRIN2A(19), GRIN2B(13), GRIN2C(3), GRIN2D(5), GRM1(14), GRM5(9), HRAS(1), ITPR1(7), ITPR2(15), ITPR3(4), KRAS(35), MAP2K1(4), MAPK3(1), NRAS(1), PLCB1(9), PLCB2(4), PLCB3(3), PLCB4(10), PPP1CA(1), PPP1CB(1), PPP1CC(1), PPP1R12A(1), PPP1R1A(2), PPP3CA(2), PPP3CB(1), PPP3CC(1), PPP3R1(2), PPP3R2(2), PRKACB(2), PRKACG(1), PRKCA(7), PRKCG(5), PRKX(3), RAF1(2), RAP1A(1), RAP1B(1), RAPGEF3(2), RPS6KA2(2), RPS6KA3(1), RPS6KA6(3) 19544532 278 103 241 82 46 108 60 38 26 0 0.429 1.000 1.000 286 HSA04910_INSULIN_SIGNALING_PATHWAY Genes involved in insulin signaling pathway ACACA, ACACB, AKT1, AKT2, AKT3, ARAF, BAD, BRAF, CALM1, CALM2, CALM3, CALML3, CALML6, CBL, CBLB, CBLC, CRK, CRKL, EIF4EBP1, ELK1, EXOC7, FASN, FBP1, FBP2, FLOT1, FLOT2, FOXO1, FRAP1, G6PC, G6PC2, GCK, GRB2, GSK3B, GYS1, GYS2, HRAS, IKBKB, INPP5D, INS, INSR, IRS1, IRS2, IRS4, KIAA1303, KRAS, LIPE, MAP2K1, MAP2K2, MAPK1, MAPK10, MAPK3, MAPK8, MAPK9, MKNK1, MKNK2, NRAS, PCK1, PCK2, PDE3A, PDE3B, PDPK1, PFKL, PFKM, PFKP, PHKA1, PHKA2, PHKB, PHKG1, PHKG2, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PKLR, PKM2, PPARGC1A, PPP1CA, PPP1CB, PPP1CC, PPP1R3A, PPP1R3B, PPP1R3C, PPP1R3D, PRKAA1, PRKAA2, PRKAB1, PRKAB2, PRKACA, PRKACB, PRKACG, PRKAG1, PRKAG2, PRKAG3, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCI, PRKCZ, PRKX, PRKY, PTPN1, PTPRF, PYGB, PYGL, PYGM, RAF1, RAPGEF1, RHEB, RHOQ, RPS6, RPS6KB1, RPS6KB2, SH2B2, SHC1, SHC2, SHC3, SHC4, SKIP, SLC2A4, SOCS1, SOCS2, SOCS3, SOCS4, SORBS1, SOS1, SOS2, SREBF1, TRIP10, TSC1, TSC2 131 ACACA(8), ACACB(7), AKT2(1), AKT3(2), ARAF(3), BRAF(13), CALM1(1), CALML3(2), CBL(7), CBLB(2), CRKL(2), EXOC7(1), FASN(1), FLOT1(2), G6PC(1), G6PC2(1), GCK(1), GRB2(3), GSK3B(1), GYS1(1), GYS2(1), HRAS(1), IKBKB(2), INPP5D(3), INSR(1), IRS1(12), IRS2(2), IRS4(7), KRAS(35), LIPE(1), MAP2K1(4), MAPK10(1), MAPK3(1), MAPK8(3), MAPK9(5), MKNK1(1), NRAS(1), PCK1(8), PCK2(1), PDE3A(5), PDE3B(3), PFKL(1), PFKM(2), PFKP(3), PHKA1(3), PHKA2(6), PHKB(4), PHKG1(1), PHKG2(2), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PKLR(4), PKM2(2), PPARGC1A(7), PPP1CA(1), PPP1CB(1), PPP1CC(1), PPP1R3A(6), PPP1R3B(1), PPP1R3C(1), PPP1R3D(4), PRKAA1(1), PRKAB1(3), PRKACB(2), PRKACG(1), PRKAG2(4), PRKAG3(1), PRKAR1B(4), PRKCI(5), PRKX(3), PTPN1(1), PTPRF(3), PYGB(1), PYGM(3), RAF1(2), RAPGEF1(1), RHEB(3), RPS6KB2(1), SHC1(2), SHC2(1), SHC3(2), SHC4(4), SOCS4(1), SORBS1(4), SOS1(9), SOS2(5), SREBF1(1), TSC1(7), TSC2(2) 31219935 305 102 267 116 59 98 71 43 34 0 0.932 1.000 1.000 287 HSA04650_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY Genes involved in natural killer cell mediated cytotoxicity ARAF, BID, BRAF, CASP3, CD244, CD247, CD48, CHP, CSF2, FAS, FASLG, FCER1G, FCGR3A, FCGR3B, FYN, GRB2, GZMB, HCST, HLA-A, HLA-B, HLA-C, HLA-E, HLA-G, HRAS, ICAM1, ICAM2, IFNA1, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA2, IFNA21, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, IFNAR1, IFNAR2, IFNB1, IFNG, IFNGR1, IFNGR2, ITGAL, ITGB2, KIR2DL1, KIR2DL2, KIR2DL3, KIR2DL4, KIR2DL5A, KIR2DS1, KIR2DS2, KIR3DL1, KIR3DL2, KLRC1, KLRC2, KLRC3, KLRD1, KLRK1, KRAS, LAT, LCK, LCP2, LOC652578, MAP2K1, MAP2K2, MAPK1, MAPK3, MICA, MICB, NCR1, NCR2, NCR3, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NRAS, PAK1, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLCG1, PLCG2, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRF1, PRKCA, PRKCB1, PRKCG, PTK2B, PTPN11, PTPN6, RAC1, RAC2, RAC3, RAF1, SH2D1A, SH2D1B, SH3BP2, SHC1, SHC2, SHC3, SHC4, SOS1, SOS2, SYK, TNF, TNFRSF10A, TNFRSF10B, TNFRSF10C, TNFRSF10D, TNFSF10, TYROBP, ULBP1, ULBP2, ULBP3, VAV1, VAV2, VAV3, ZAP70 126 ARAF(3), BID(1), BRAF(13), CASP3(4), CD244(4), CD48(2), FAS(2), FASLG(2), FCER1G(1), FCGR3A(5), FCGR3B(5), FYN(2), GRB2(3), GZMB(3), HCST(2), HLA-A(1), HLA-B(1), HRAS(1), ICAM2(1), IFNA10(1), IFNA14(3), IFNA16(1), IFNA17(1), IFNA2(3), IFNA21(1), IFNA4(1), IFNA6(2), IFNA7(3), IFNA8(1), IFNAR2(1), IFNB1(3), IFNG(3), IFNGR1(3), IFNGR2(2), ITGAL(17), ITGB2(2), KIR2DL1(1), KIR2DL3(1), KIR2DL4(1), KIR3DL1(5), KLRC1(1), KLRC2(2), KLRC3(3), KLRD1(1), KLRK1(2), KRAS(35), LAT(3), LCK(5), LCP2(3), MAP2K1(4), MAPK3(1), NCR1(1), NCR3(1), NFAT5(4), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), NRAS(1), PAK1(5), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PLCG1(4), PLCG2(4), PPP3CA(2), PPP3CB(1), PPP3CC(1), PPP3R1(2), PPP3R2(2), PRF1(4), PRKCA(7), PRKCG(5), PTK2B(6), PTPN11(1), PTPN6(2), RAF1(2), SH2D1B(1), SH3BP2(2), SHC1(2), SHC2(1), SHC3(2), SHC4(4), SOS1(9), SOS2(5), SYK(1), TNFRSF10B(1), TNFRSF10C(1), TNFSF10(1), ULBP1(1), VAV1(1), VAV2(2), VAV3(9), ZAP70(2) 22166457 307 101 269 82 45 103 72 48 39 0 0.165 1.000 1.000 288 HSA04110_CELL_CYCLE Genes involved in cell cycle ABL1, ANAPC1, ANAPC10, ANAPC11, ANAPC2, ANAPC4, ANAPC5, ANAPC7, ATM, ATR, BUB1, BUB1B, BUB3, CCNA1, CCNA2, CCNB1, CCNB2, CCNB3, CCND1, CCND2, CCND3, CCNE1, CCNE2, CCNH, CDC14A, CDC14B, CDC16, CDC2, CDC20, CDC23, CDC25A, CDC25B, CDC25C, CDC26, CDC27, CDC45L, CDC6, CDC7, CDK2, CDK4, CDK6, CDK7, CDKN1A, CDKN1B, CDKN1C, CDKN2A, CDKN2B, CDKN2C, CDKN2D, CHEK1, CHEK2, CREBBP, CUL1, DBF4, E2F1, E2F2, E2F3, EP300, ESPL1, FZR1, GADD45A, GADD45B, GADD45G, GSK3B, hCG_1982709, HDAC1, HDAC2, LOC440917, LOC728919, MAD1L1, MAD2L1, MAD2L2, MCM2, MCM3, MCM4, MCM5, MCM6, MCM7, MDM2, ORC1L, ORC2L, ORC3L, ORC4L, ORC5L, ORC6L, PCNA, PKMYT1, PLK1, PRKDC, PTTG1, PTTG2, RB1, RBL1, RBL2, RBX1, SFN, SKP1, SKP2, SMAD2, SMAD3, SMAD4, SMC1A, SMC1B, TFDP1, TGFB1, TGFB2, TGFB3, TP53, WEE1, YWHAB, YWHAE, YWHAG, YWHAH, YWHAQ, YWHAZ 109 ABL1(1), ANAPC1(2), ANAPC10(1), ANAPC11(1), ANAPC2(1), ANAPC4(1), ANAPC5(2), ANAPC7(2), ATM(14), ATR(9), BUB1(4), BUB1B(5), BUB3(1), CCNA1(2), CCNA2(2), CCNB1(1), CCNB3(4), CCND1(2), CCND3(1), CCNE1(3), CDC14A(6), CDC14B(1), CDC16(1), CDC20(2), CDC23(1), CDC25A(2), CDC25B(1), CDC27(2), CDC6(1), CDC7(3), CDK2(4), CDK4(2), CDK7(2), CDKN1B(2), CDKN2A(7), CDKN2D(1), CHEK1(6), CHEK2(2), CREBBP(2), CUL1(3), DBF4(3), E2F3(1), EP300(1), ESPL1(4), FZR1(2), GADD45A(1), GSK3B(1), HDAC1(1), HDAC2(6), MAD1L1(5), MAD2L1(1), MCM2(4), MCM3(3), MCM4(5), MCM5(1), MCM6(5), MCM7(1), MDM2(1), ORC1L(2), ORC2L(1), ORC4L(1), ORC5L(3), PKMYT1(2), PLK1(1), PRKDC(14), PTTG2(2), RB1(5), RBL1(4), RBL2(1), SKP1(1), SKP2(3), SMAD2(2), SMAD3(3), SMAD4(6), SMC1A(3), SMC1B(3), TFDP1(2), TGFB1(2), TGFB2(5), TGFB3(1), TP53(65), WEE1(1), YWHAG(1) 26613990 290 100 279 63 48 66 83 37 56 0 0.0225 1.000 1.000 289 HSA04730_LONG_TERM_DEPRESSION Genes involved in long-term depression ARAF, BRAF, C7orf16, CACNA1A, CRH, CRHR1, GNA11, GNA12, GNA13, GNAI1, GNAI2, GNAI3, GNAO1, GNAQ, GNAS, GNAZ, GRIA1, GRIA2, GRIA3, GRID2, GRM1, GRM5, GUCY1A2, GUCY1A3, GUCY1B3, GUCY2C, GUCY2D, GUCY2F, HRAS, IGF1, IGF1R, ITPR1, ITPR2, ITPR3, KRAS, LYN, MAP2K1, MAP2K2, MAPK1, MAPK3, NOS1, NOS2A, NOS3, NPR1, NPR2, NRAS, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLCB1, PLCB2, PLCB3, PLCB4, PPP2CA, PPP2CB, PPP2R1A, PPP2R1B, PPP2R2A, PPP2R2B, PPP2R2C, PRKCA, PRKCB1, PRKCG, PRKG1, PRKG2, RAF1, RYR1 74 ARAF(3), BRAF(13), CACNA1A(6), CRHR1(1), GNA12(1), GNA13(1), GNAI1(1), GNAI3(1), GNAO1(2), GNAQ(2), GNAS(3), GNAZ(1), GRIA1(8), GRIA2(7), GRIA3(5), GRID2(7), GRM1(14), GRM5(9), GUCY1A2(3), GUCY1A3(6), GUCY1B3(2), GUCY2C(4), GUCY2F(8), HRAS(1), IGF1(3), IGF1R(6), ITPR1(7), ITPR2(15), ITPR3(4), KRAS(35), LYN(3), MAP2K1(4), MAPK3(1), NOS1(5), NOS3(1), NPR1(3), NPR2(2), NRAS(1), PLA2G10(1), PLA2G12B(1), PLA2G1B(1), PLA2G2A(3), PLA2G2E(1), PLA2G2F(1), PLA2G3(4), PLA2G4A(5), PLA2G6(1), PLCB1(9), PLCB2(4), PLCB3(3), PLCB4(10), PPP2CB(2), PPP2R1A(3), PPP2R1B(1), PPP2R2A(3), PPP2R2B(4), PPP2R2C(3), PRKCA(7), PRKCG(5), PRKG1(1), PRKG2(4), RAF1(2), RYR1(26) 21486369 304 99 266 92 50 109 76 42 27 0 0.480 1.000 1.000 290 CELL_CYCLE_KEGG ABL1, ASK, ATM, BUB1, BUB1B, BUB3, CCNA1, CCNA2, CCNB1, CCNB2, CCNB3, CCND2, CCND3, CCNE1, CCNE2, CCNH, CDAN1, CDC14A, CDC14B, CDC14B, CDC14C, CDC2, CDC20, CDC25A, CDC25B, CDC25C, CDC45L, CDC6, CDC7, CDH1, CDK2, CDK4, CDKN1A, CDKN2A, CHEK1, CHEK2, DTX4, E2F1, E2F2, E2F3, E2F4, E2F5, E2F6, EP300, ESPL1, FLJ14001, GADD45A, GSK3B, HDAC1, HDAC2, HDAC3, HDAC4, HDAC5, HDAC6, HDAC7A, HDAC8, MAD1L1, MAD2L1, MAD2L2, MCM2, MCM3, MCM4, MCM5, MCM6, MCM7, MDM2, MPEG1, MPL, ORC1L, ORC2L, ORC3L, ORC4L, ORC5L, ORC6L, PCNA, PLK1, PRKDC, PTPRA, PTTG1, PTTG2, PTTG3, RB1, RBL1, SKP2, SMAD4, SMC1L1, TBC1D8, TFDP1, TGFB1, TP53, WEE1 82 ABL1(1), ATM(14), BUB1(4), BUB1B(5), BUB3(1), CCNA1(2), CCNA2(2), CCNB1(1), CCNB3(4), CCND3(1), CCNE1(3), CDAN1(1), CDC14A(6), CDC14B(1), CDC20(2), CDC25A(2), CDC25B(1), CDC6(1), CDC7(3), CDH1(4), CDK2(4), CDK4(2), CDKN2A(7), CHEK1(6), CHEK2(2), DTX4(1), E2F3(1), E2F6(2), EP300(1), ESPL1(4), GADD45A(1), GSK3B(1), HDAC1(1), HDAC2(6), HDAC3(1), HDAC4(10), HDAC5(2), HDAC6(4), HDAC8(1), MAD1L1(5), MAD2L1(1), MCM2(4), MCM3(3), MCM4(5), MCM5(1), MCM6(5), MCM7(1), MDM2(1), MPEG1(3), MPL(1), ORC1L(2), ORC2L(1), ORC4L(1), ORC5L(3), PLK1(1), PRKDC(14), PTPRA(2), PTTG2(2), RB1(5), RBL1(4), SKP2(3), SMAD4(6), TBC1D8(1), TFDP1(2), TGFB1(2), TP53(65), WEE1(1) 21534873 261 96 250 56 44 70 67 31 49 0 0.0160 1.000 1.000 291 SMOOTH_MUSCLE_CONTRACTION ACTA1, ACTA2, ACTC, ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, ADM, ADMR, ARRB1, ARRB2, ATF1, ATF2, ATF3, ATF4, ATF5, ATP2A2, ATP2A3, CACNB3, CALCA, CALM1, CALM2, CALM3, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CMKOR1, CNN1, CNN2, CORIN, CREB3, CREBL1, CREBL1, TNXB, CRH, CRHR1, DGKZ, EDG2, ETS2, FOS, GABPA, GABPB2, GBA2, GJA1, GNAQ, GNB1, GNB2, GNB3, GNB4, GNB5, GNG12, GNG13, GNG2, GNG3, GNG4, GNG5, GNG7, GNGT1, GRK4, GRK5, GRK6, GSTO1, GUCA2A, GUCA2B, GUCY1A3, HEAB, IGFBP1, IGFBP2, IGFBP3, IGFBP4, IGFBP6, IL1B, IL6, ITPR1, ITPR2, ITPR3, JUN, LGR7, LGR8, MAFF, MGC11266, MYL2, MYL4, MYLK2, NFKB1, NOS1, NOS3, OXT, OXTR, PDE4B, PDE4D, PKIA, PKIB, PKIG, PLCB3, PLCD1, PLCG1, PLCG2, PRKACA, PRKACB, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCH, PRKCQ, PRKCZ, PRKD1, RAMP1, RAMP2, RAMP3, RCP9, RGS1, RGS10, RGS11, RGS14, RGS16, RGS17, RGS18, RGS19, RGS2, RGS20, RGS3, RGS4, RGS5, RGS6, RGS7, RGS9, RLN1, RYR1, RYR2, RYR3, SARA1, SFN, SLC8A1, SP1, USP5, YWHAB, YWHAH, YWHAQ, YWHAQ, MIB1 138 ACTA2(1), ADCY1(8), ADCY2(6), ADCY3(2), ADCY4(5), ADCY5(5), ADCY6(5), ADCY7(3), ADCY8(13), ADCY9(1), ARRB1(1), ARRB2(1), ATF2(2), ATP2A2(5), ATP2A3(1), CALM1(1), CAMK2A(1), CAMK2D(1), CAMK2G(2), CORIN(8), CRHR1(1), DGKZ(3), ETS2(1), GABPA(1), GBA2(1), GJA1(2), GNAQ(2), GNB1(1), GNB3(2), GNB4(1), GNB5(1), GNG12(2), GNG2(3), GNG3(2), GNGT1(1), GRK4(1), GRK5(6), GRK6(1), GUCA2B(1), GUCY1A3(6), IGFBP1(2), IGFBP2(1), IGFBP3(2), ITPR1(7), ITPR2(15), ITPR3(4), MIB1(5), MYL2(2), MYL4(1), MYLK2(2), NFKB1(2), NOS1(5), NOS3(1), OXT(1), OXTR(1), PDE4B(4), PDE4D(4), PLCB3(3), PLCD1(1), PLCG1(4), PLCG2(4), PRKACB(2), PRKAR1B(4), PRKCA(7), PRKCD(1), PRKCE(1), PRKCH(2), PRKCQ(3), PRKD1(8), RAMP2(1), RAMP3(1), RGS1(4), RGS11(1), RGS16(1), RGS18(2), RGS2(1), RGS20(2), RGS3(4), RGS4(3), RGS5(4), RGS6(1), RGS7(7), RGS9(3), RYR1(26), RYR2(89), RYR3(27), SLC8A1(17), TNXB(6), USP5(2) 33915261 412 96 409 163 64 145 122 49 30 2 0.991 1.000 1.000 292 HSA04670_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION Genes involved in Leukocyte transendothelial migration ACTN1, ACTN2, ACTN3, ACTN4, ARHGAP5, BCAR1, CD99, CDC42, CDH5, CLDN1, CLDN10, CLDN11, CLDN14, CLDN15, CLDN16, CLDN17, CLDN18, CLDN19, CLDN2, CLDN20, CLDN22, CLDN23, CLDN3, CLDN4, CLDN5, CLDN6, CLDN7, CLDN8, CLDN9, CTNNA1, CTNNA2, CTNNA3, CTNNB1, CTNND1, CXCL12, CXCR4, CYBA, CYBB, ESAM, EZR, F11R, GNAI1, GNAI2, GNAI3, GRLF1, ICAM1, ITGA4, ITGAL, ITGAM, ITGB1, ITGB2, ITK, JAM2, JAM3, MAPK11, MAPK12, MAPK13, MAPK14, MLLT4, MMP2, MMP9, MRCL3, MRLC2, MSN, MYL2, MYL5, MYL7, MYL8P, MYL9, MYLC2PL, MYLPF, NCF1, NCF2, NCF4, NOX1, NOX3, OCLN, PECAM1, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLCG1, PLCG2, PRKCA, PRKCB1, PRKCG, PTK2, PTK2B, PTPN11, PXN, RAC1, RAC2, RAP1A, RAP1B, RAPGEF3, RAPGEF4, RASSF5, RHOA, RHOH, ROCK1, ROCK2, SIPA1, THY1, TXK, VASP, VAV1, VAV2, VAV3, VCAM1, VCL 109 ACTN2(14), ACTN3(2), ACTN4(1), ARHGAP5(4), BCAR1(1), CD99(3), CDC42(2), CDH5(3), CLDN1(3), CLDN10(1), CLDN11(2), CLDN14(1), CLDN15(1), CLDN17(1), CLDN18(3), CLDN2(1), CLDN20(1), CLDN4(1), CLDN8(3), CTNNA1(2), CTNNA2(15), CTNNA3(11), CTNNB1(9), CTNND1(7), CXCR4(3), CYBB(7), F11R(1), GNAI1(1), GNAI3(1), GRLF1(6), ITGA4(11), ITGAL(17), ITGAM(9), ITGB1(2), ITGB2(2), ITK(4), JAM2(5), MAPK14(1), MLLT4(3), MMP2(6), MMP9(8), MYL2(2), MYL5(1), MYL7(1), MYLPF(1), NCF1(1), NCF2(2), NCF4(1), NOX1(1), NOX3(4), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PLCG1(4), PLCG2(4), PRKCA(7), PRKCG(5), PTK2(7), PTK2B(6), PTPN11(1), RAP1A(1), RAP1B(1), RAPGEF3(2), RAPGEF4(2), RHOA(1), ROCK1(7), ROCK2(3), SIPA1(1), TXK(4), VAV1(1), VAV2(2), VAV3(9), VCAM1(8), VCL(2) 24141318 291 95 289 107 46 93 78 43 31 0 0.941 1.000 1.000 293 GPCRDB_CLASS_A_RHODOPSIN_LIKE ADORA1, ADORA2A, ADORA2B, ADORA3, ADRA1A, ADRA1B, ADRA1D, ADRA2A, ADRA2C, ADRB1, ADRB2, ADRB3, AGTR1, AGTR2, AGTRL1, AVPR1A, AVPR1B, AVPR2, BDKRB1, BDKRB2, BLR1, BRS3, C3AR1, C5R1, CCBP2, CCKAR, CCKBR, CCR1, CCR10, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCRL1, CCRL2, CHML, CHRM1, CHRM2, CHRM3, CHRM4, CHRM5, CMKLR1, CMKOR1, CNR1, CNR2, CX3CR1, CXCR3, CXCR4, DRD1, DRD2, DRD3, DRD4, DRD5, EDNRA, EDNRB, ELA3A, F2R, F2RL1, F2RL2, F2RL3, FPR1, FPRL1, FPRL2, FSHR, GALR1, GALR2, GALR3, GALT, GHSR, GNB2L1, GPR10, GPR147, GPR17, GPR173, GPR174, GPR23, GPR24, GPR27, GPR3, GPR30, GPR35, GPR37, GPR37L1, GPR4, GPR44, GPR50, GPR6, GPR63, GPR74, GPR77, GPR83, GPR85, GPR87, GPR92, GRPR, HCRTR1, HCRTR2, HRH1, HRH2, HRH3, HTR1A, HTR1B, HTR1D, HTR1E, HTR1F, HTR2A, HTR2B, HTR2C, HTR4, HTR5A, HTR6, HTR7, HTR7, LOC93164, IL8RA, IL8RB, LHCGR, LTB4R, MAS1, MC1R, MC3R, MC4R, MC5R, MLNR, MTNR1A, MTNR1B, NMBR, NMUR1, NMUR2, NPY1R, NPY2R, NPY5R, NPY6R, NTSR1, NTSR2, OPN1SW, OPN3, OPRD1, OPRK1, OPRL1, OPRM1, OR10A5, OR11A1, OR12D3, OR1C1, OR1F1, OR1Q1, OR2H1, OR5V1, OR5V1, OR12D3, OR7A5, OR7C1, OR8B8, OXTR, P2RY1, P2RY10, P2RY11, P2RY12, P2RY13, P2RY14, P2RY2, P2RY5, P2RY6, PPYR1, PTAFR, PTGDR, PTGER1, PTGER2, PTGER4, PTGFR, PTGIR, Rgr, RGR, RHO, RRH, SSTR1, SSTR2, SSTR3, SSTR4, SUCNR1, TBXA2R, TRHR 162 ADORA1(1), ADORA3(1), ADRA1A(2), ADRA1D(2), ADRA2A(1), ADRA2C(1), ADRB3(1), AGTR1(1), AGTR2(2), AVPR1A(4), AVPR1B(1), AVPR2(3), BRS3(6), C3AR1(2), CCBP2(2), CCKAR(4), CCKBR(8), CCR1(1), CCR2(5), CCR3(1), CCR4(1), CCR5(1), CCR6(1), CCR8(5), CCRL1(1), CCRL2(2), CHML(3), CHRM1(1), CHRM2(4), CHRM3(4), CHRM4(2), CMKLR1(7), CNR1(3), CNR2(1), CX3CR1(5), CXCR3(1), CXCR4(3), DRD1(2), DRD2(7), DRD3(7), DRD5(3), EDNRB(2), F2R(2), F2RL1(1), F2RL2(2), F2RL3(2), FPR1(1), FSHR(11), GALR1(2), GALR2(1), GALT(1), GHSR(2), GNB2L1(1), GPR17(1), GPR174(5), GPR27(1), GPR37(2), GPR37L1(2), GPR4(3), GPR50(5), GPR6(1), GPR63(4), GPR77(1), GPR83(3), GPR85(3), GPR87(1), GRPR(5), HCRTR2(7), HRH1(4), HRH2(2), HRH3(1), HTR1A(8), HTR1B(2), HTR1E(4), HTR1F(3), HTR2A(2), HTR2C(5), HTR5A(6), HTR6(3), LHCGR(3), LTB4R(2), MAS1(2), MC3R(5), MC5R(5), MLNR(1), MTNR1A(3), MTNR1B(5), NMBR(3), NMUR1(3), NMUR2(6), NPY1R(6), NPY2R(6), NPY5R(5), NTSR1(2), OPN1SW(1), OPRK1(2), OPRL1(3), OPRM1(1), OR10A5(3), OR11A1(2), OR1C1(4), OR1F1(1), OR1Q1(2), OR2H1(4), OR5V1(1), OR7A5(1), OR8B8(2), OXTR(1), P2RY1(5), P2RY10(5), P2RY12(2), P2RY14(1), P2RY6(1), PPYR1(1), PTAFR(2), PTGER2(1), PTGER4(4), PTGFR(5), PTGIR(1), RRH(1), SSTR1(2), SSTR3(2), SSTR4(4), SUCNR1(1) 23525730 348 94 347 149 38 130 98 53 29 0 0.969 1.000 1.000 294 HSA04514_CELL_ADHESION_MOLECULES Genes involved in cell adhesion molecules (CAMs) ALCAM, CADM1, CADM3, CD2, CD22, CD226, CD274, CD276, CD28, CD34, CD4, CD40, CD40LG, CD58, CD6, CD80, CD86, CD8A, CD8B, CD99, CDH1, CDH15, CDH2, CDH3, CDH4, CDH5, CLDN1, CLDN10, CLDN11, CLDN14, CLDN15, CLDN16, CLDN17, CLDN18, CLDN19, CLDN2, CLDN20, CLDN22, CLDN23, CLDN3, CLDN4, CLDN5, CLDN6, CLDN7, CLDN8, CLDN9, CNTN1, CNTN2, CNTNAP1, CNTNAP2, CTLA4, ESAM, F11R, GLG1, HLA-A, HLA-A29.1, HLA-B, HLA-C, HLA-DMA, HLA-DMB, HLA-DOA, HLA-DOB, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2, HLA-DRA, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, HLA-E, HLA-F, HLA-G, ICAM1, ICAM2, ICAM3, ICOS, ICOSLG, ITGA4, ITGA6, ITGA8, ITGA9, ITGAL, ITGAM, ITGAV, ITGB1, ITGB2, ITGB7, ITGB8, JAM2, JAM3, L1CAM, MADCAM1, MAG, MPZ, MPZL1, NCAM1, NCAM2, NEGR1, NEO1, NFASC, NLGN1, NLGN2, NLGN3, NRCAM, NRXN1, NRXN2, NRXN3, OCLN, PDCD1, PDCD1LG2, PECAM1, PTPRC, PTPRF, PTPRM, PVR, PVRL1, PVRL2, PVRL3, SDC1, SDC2, SDC3, SDC4, SELE, SELL, SELP, SELPLG, SIGLEC1, SPN, VCAM1, VCAN 129 ALCAM(3), CADM1(2), CADM3(3), CD2(2), CD22(3), CD226(3), CD274(2), CD276(1), CD28(1), CD34(2), CD4(1), CD40LG(4), CD58(1), CD6(3), CD86(2), CD8A(1), CD8B(1), CD99(3), CDH1(4), CDH15(3), CDH2(13), CDH3(2), CDH4(5), CDH5(3), CLDN1(3), CLDN10(1), CLDN11(2), CLDN14(1), CLDN15(1), CLDN17(1), CLDN18(3), CLDN2(1), CLDN20(1), CLDN4(1), CLDN8(3), CNTN1(11), CNTN2(7), CNTNAP1(4), CNTNAP2(26), CTLA4(1), F11R(1), GLG1(7), HLA-A(1), HLA-B(1), HLA-DMA(2), HLA-DMB(1), HLA-DOB(1), HLA-DPA1(2), HLA-DQA2(1), HLA-DRA(2), ICAM2(1), ITGA4(11), ITGA6(3), ITGA8(15), ITGA9(1), ITGAL(17), ITGAM(9), ITGAV(5), ITGB1(2), ITGB2(2), ITGB7(1), ITGB8(1), JAM2(5), L1CAM(7), MADCAM1(2), MAG(2), MPZL1(1), NCAM1(3), NCAM2(7), NEGR1(3), NEO1(10), NFASC(5), NLGN1(11), NLGN2(3), NLGN3(1), NRCAM(10), NRXN1(27), NRXN2(5), NRXN3(8), PDCD1LG2(1), PTPRC(10), PTPRF(3), PTPRM(3), PVRL1(3), SDC1(2), SDC3(1), SELE(2), SELL(1), SELP(11), SELPLG(3), SIGLEC1(3), SPN(2), VCAM1(8), VCAN(13) 28694631 398 94 398 142 68 135 101 52 41 1 0.921 1.000 1.000 295 HSA04520_ADHERENS_JUNCTION Genes involved in adherens junction ACP1, ACTB, ACTG1, ACTN1, ACTN2, ACTN3, ACTN4, ACVR1B, ACVR1C, BAIAP2, CDC42, CDH1, CREBBP, CSNK2A1, CSNK2A2, CSNK2B, CTNNA1, CTNNA2, CTNNA3, CTNNB1, CTNND1, EGFR, EP300, ERBB2, FARP2, FER, FGFR1, FYN, IGF1R, INSR, IQGAP1, LEF1, LMO7, MAP3K7, MAPK1, MAPK3, MET, MLLT4, NLK, PARD3, PTPN1, PTPN6, PTPRB, PTPRF, PTPRJ, PTPRM, PVRL1, PVRL2, PVRL3, PVRL4, RAC1, RAC2, RAC3, RHOA, SMAD2, SMAD3, SMAD4, SNAI1, SNAI2, SORBS1, SRC, SSX2IP, TCF7, TCF7L1, TCF7L2, TGFBR1, TGFBR2, TJP1, VCL, WAS, WASF1, WASF2, WASF3, WASL, YES1 75 ACP1(1), ACTG1(2), ACTN2(14), ACTN3(2), ACTN4(1), ACVR1B(4), ACVR1C(2), BAIAP2(2), CDC42(2), CDH1(4), CREBBP(2), CTNNA1(2), CTNNA2(15), CTNNA3(11), CTNNB1(9), CTNND1(7), EGFR(24), EP300(1), ERBB2(5), FARP2(2), FER(3), FGFR1(5), FYN(2), IGF1R(6), INSR(1), IQGAP1(5), LEF1(6), LMO7(7), MAP3K7(3), MAPK3(1), MET(10), MLLT4(3), PARD3(4), PTPN1(1), PTPN6(2), PTPRB(9), PTPRF(3), PTPRJ(4), PTPRM(3), PVRL1(3), PVRL4(1), RHOA(1), SMAD2(2), SMAD3(3), SMAD4(6), SNAI1(3), SNAI2(2), SORBS1(4), SRC(2), SSX2IP(2), TCF7(1), TCF7L1(1), TCF7L2(2), TGFBR1(2), TJP1(4), VCL(2), WAS(2), WASF1(4), WASF3(2), WASL(4), YES1(2) 23237931 245 94 232 83 44 62 57 43 39 0 0.817 1.000 1.000 296 HSA04660_T_CELL_RECEPTOR_SIGNALING_PATHWAY Genes involved in T cell receptor signaling pathway AKT1, AKT2, AKT3, BCL10, CARD11, CBL, CBLB, CBLC, CD247, CD28, CD3D, CD3E, CD3G, CD4, CD40LG, CD8A, CD8B, CDC42, CDK4, CHP, CHUK, CSF2, CTLA4, FOS, FYN, GRAP2, GRB2, HRAS, ICOS, IFNG, IKBKB, IKBKG, IL10, IL2, IL4, IL5, ITK, JUN, KRAS, LAT, LCK, LCP2, MALT1, MAP3K14, MAP3K8, NCK1, NCK2, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NRAS, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PDCD1, PDK1, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLCG1, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRKCQ, PTPN6, PTPRC, RASGRP1, RHOA, SOS1, SOS2, TEC, TNF, VAV1, VAV2, VAV3, ZAP70 92 AKT2(1), AKT3(2), BCL10(1), CARD11(11), CBL(7), CBLB(2), CD28(1), CD3D(1), CD4(1), CD40LG(4), CD8A(1), CD8B(1), CDC42(2), CDK4(2), CHUK(1), CTLA4(1), FYN(2), GRAP2(3), GRB2(3), HRAS(1), IFNG(3), IKBKB(2), IL2(3), ITK(4), KRAS(35), LAT(3), LCK(5), LCP2(3), MALT1(2), MAP3K14(1), MAP3K8(1), NCK1(1), NCK2(3), NFAT5(4), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), NFKB1(2), NFKB2(3), NFKBIE(1), NRAS(1), PAK1(5), PAK2(3), PAK3(2), PAK4(1), PAK7(15), PDK1(2), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PLCG1(4), PPP3CA(2), PPP3CB(1), PPP3CC(1), PPP3R1(2), PPP3R2(2), PRKCQ(3), PTPN6(2), PTPRC(10), RHOA(1), SOS1(9), SOS2(5), TEC(4), VAV1(1), VAV2(2), VAV3(9), ZAP70(2) 19720230 248 94 215 75 39 87 64 27 31 0 0.526 1.000 1.000 297 HSA04210_APOPTOSIS Genes involved in apoptosis AIFM1, AKT1, AKT2, AKT3, APAF1, ATM, BAD, BAX, BCL2, BCL2L1, BID, BIRC2, BIRC3, BIRC4, CAPN1, CAPN2, CASP10, CASP3, CASP6, CASP7, CASP8, CASP9, CFLAR, CHP, CHUK, CSF2RB, CYCS, DFFA, DFFB, ENDOG, FADD, FAS, FASLG, IKBKB, IKBKG, IL1A, IL1B, IL1R1, IL1RAP, IL3, IL3RA, IRAK1, IRAK2, IRAK3, IRAK4, MAP3K14, MYD88, NFKB1, NFKB2, NFKBIA, NGFB, NTRK1, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRKACA, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, RELA, RIPK1, TNF, TNFRSF10A, TNFRSF10B, TNFRSF10C, TNFRSF10D, TNFRSF1A, TNFSF10, TP53, TRADD, TRAF2 81 AIFM1(4), AKT2(1), AKT3(2), APAF1(4), ATM(14), BAX(1), BCL2(1), BID(1), BIRC2(2), BIRC3(2), CASP10(3), CASP3(4), CASP8(3), CASP9(2), CFLAR(1), CHUK(1), CSF2RB(3), DFFA(3), FAS(2), FASLG(2), IKBKB(2), IL1A(2), IL1RAP(2), IL3(1), IL3RA(4), IRAK1(2), IRAK3(2), IRAK4(2), MAP3K14(1), MYD88(2), NFKB1(2), NFKB2(3), NTRK1(6), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PPP3CA(2), PPP3CB(1), PPP3CC(1), PPP3R1(2), PPP3R2(2), PRKACB(2), PRKACG(1), PRKAR1B(4), RIPK1(3), TNFRSF10B(1), TNFRSF10C(1), TNFSF10(1), TP53(65) 16312437 193 92 181 59 19 43 55 33 43 0 0.679 1.000 1.000 298 G_PROTEIN_SIGNALING ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, AKAP1, AKAP10, AKAP11, AKAP12, AKAP2, PALM2_AKAP2, AKAP3, AKAP4, AKAP5, AKAP6, AKAP7, AKAP8, AKAP9, ARHGEF1, CALM1, CALM2, CALM3, CHMP1B, GNA11, GNA12, GNA13, GNA14, GNA15, GNAI2, GNAI3, GNAL, GNAO1, GNAQ, GNAZ, GNB1, GNB2, GNB3, GNB5, GNG10, GNG10, LOC552891, GNG12, GNG13, GNG3, GNG4, GNG5, GNG7, GNGT1, GNGT2, HRAS, IL18BP, ITPR1, KCNJ3, KRAS, MGC11266, NRAS, PALM2, PALM2_AKAP2, PALM2_AKAP2, PDE1A, PDE1B, PDE1C, PDE4A, PDE4B, PDE4C, PDE4D, PDE7A, PDE7B, PDE8A, PDE8B, PLCB3, PPP3CA, PPP3CC, PRKACA, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCG, PRKCH, PRKCI, PRKCQ, PRKCZ, PRKD1, PRKD3, RHOA, RRAS, SARA1, SLC9A1, USP5 92 ADCY1(8), ADCY2(6), ADCY3(2), ADCY4(5), ADCY5(5), ADCY6(5), ADCY7(3), ADCY8(13), ADCY9(1), AKAP1(2), AKAP10(1), AKAP11(7), AKAP12(4), AKAP3(4), AKAP4(1), AKAP5(1), AKAP6(9), AKAP9(16), ARHGEF1(1), CALM1(1), GNA12(1), GNA13(1), GNAI3(1), GNAO1(2), GNAQ(2), GNAZ(1), GNB1(1), GNB3(2), GNB5(1), GNG12(2), GNG3(2), GNGT1(1), GNGT2(1), HRAS(1), IL18BP(1), ITPR1(7), KCNJ3(10), KRAS(35), NRAS(1), PDE1A(5), PDE1B(6), PDE1C(11), PDE4B(4), PDE4C(1), PDE4D(4), PDE7A(1), PDE7B(1), PDE8A(1), PDE8B(4), PLCB3(3), PPP3CA(2), PPP3CC(1), PRKACB(2), PRKACG(1), PRKAR1B(4), PRKCA(7), PRKCD(1), PRKCE(1), PRKCG(5), PRKCH(2), PRKCI(5), PRKCQ(3), PRKD1(8), PRKD3(1), RHOA(1), SLC9A1(1), USP5(2) 22767081 256 90 224 89 31 112 64 21 28 0 0.930 1.000 1.000 299 STRIATED_MUSCLE_CONTRACTION ACTA1, ACTA2, ACTC, ACTN2, ACTN3, ACTN4, C9orf97, DES, DES, FAM48A, DMD, MYBPC1, MYBPC2, MYBPC3, MYH3, MYH6, MYH6, MYH7, MYH8, MYL1, MYL2, MYL3, MYL4, MYL9, MYOM1, NEB, TCAP, TMOD1, TNNC2, TNNI1, TNNI2, TNNI3, TNNT1, TNNT2, TNNT3, TPM1, TPM2, TPM3, TPM4, TPM4, TTN, VIM 37 ACTA2(1), ACTN2(14), ACTN3(2), ACTN4(1), DMD(21), FAM48A(2), MYBPC1(4), MYBPC2(2), MYBPC3(4), MYH3(6), MYH6(12), MYH7(14), MYH8(15), MYL1(2), MYL2(2), MYL4(1), MYOM1(2), NEB(21), TMOD1(1), TNNC2(2), TNNI1(2), TNNI2(3), TNNI3(1), TNNT2(2), TNNT3(1), TPM1(1), TPM2(1), TPM3(1), TTN(220), VIM(2) 26804523 363 90 362 141 49 125 91 59 34 5 1.000 1.000 1.000 300 ST_INTEGRIN_SIGNALING_PATHWAY Integrins are transmembrane receptors that mediate cell growth, survival, and migration by binding to ligands in the extracellular matrix. ABL1, ACK1, ACTN1, ACTR2, ACTR3, AKT1, AKT2, AKT3, ANGPTL2, ARHGEF6, ARHGEF7, BCAR1, BRAF, CAV1, CDC42, CDKN2A, CRK, CSE1L, DDEF1, DOCK1, EPHB2, FYN, GRAF, GRB2, GRB7, GRF2, GRLF1, ILK, ITGA1, ITGA10, ITGA11, ITGA2, ITGA3, ITGA4, ITGA5, ITGA6, ITGA7, ITGA8, ITGA9, ITGB3BP, MAP2K4, MAP2K7, MAP3K11, MAPK1, MAPK10, MAPK8, MAPK8IP1, MAPK8IP2, MAPK8IP3, MAPK9, MRAS, MYLK, MYLK2, P4HB, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PIK3CA, PIK3CB, PKLR, PLCG1, PLCG2, PTEN, PTK2, RAF1, RALA, RHO, ROCK1, ROCK2, SHC1, SOS1, SOS2, SRC, TERF2IP, TLN1, TLN2, VASP, WAS, ZYX 78 ABL1(1), ACTR2(1), ACTR3(1), AKT2(1), AKT3(2), ANGPTL2(2), ARHGEF6(4), ARHGEF7(3), BCAR1(1), BRAF(13), CDC42(2), CDKN2A(7), CSE1L(3), DOCK1(4), EPHB2(4), FYN(2), GRB2(3), GRB7(2), GRLF1(6), ITGA1(5), ITGA10(2), ITGA11(5), ITGA2(4), ITGA3(1), ITGA4(11), ITGA5(4), ITGA6(3), ITGA7(2), ITGA8(15), ITGA9(1), MAP2K4(2), MAP2K7(1), MAP3K11(6), MAPK10(1), MAPK8(3), MAPK8IP1(3), MAPK8IP3(1), MAPK9(5), MRAS(1), MYLK(10), MYLK2(2), P4HB(2), PAK1(5), PAK2(3), PAK3(2), PAK4(1), PAK7(15), PIK3CA(5), PIK3CB(2), PKLR(4), PLCG1(4), PLCG2(4), PTEN(3), PTK2(7), RAF1(2), RALA(2), ROCK1(7), ROCK2(3), SHC1(2), SOS1(9), SOS2(5), SRC(2), TLN1(9), TLN2(4), WAS(2), ZYX(2) 23716650 256 89 248 77 57 65 56 43 35 0 0.445 1.000 1.000 301 G1_TO_S_CELL_CYCLE_REACTOME ATM, CCNA1, CCNB1, CCND1, CCND2, CCND3, CCNE1, CCNE2, CCNG2, CCNH, CDC25A, CDC45L, CDK2, CDK4, CDK7, CDKN1A, CDKN1B, CDKN1C, CDKN2A, CDKN2B, CDKN2C, CDKN2D, CREB3, CREB3L1, CREB3L3, CREB3L4, CREBL1, CREBL1, TNXB, E2F1, E2F2, E2F3, E2F4, E2F5, E2F6, FLJ14001, GADD45A, GBA2, MCM2, MCM3, MCM4, MCM5, MCM6, MCM7, MDM2, MNAT1, MYC, MYT1, NACA, NACA, FKSG17, ORC1L, ORC2L, ORC3L, ORC4L, ORC5L, ORC6L, PCNA, POLA2, POLE, POLE2, PRIM1, PRIM2A, RB1, RBL1, RPA1, RPA2, RPA3, TFDP1, TFDP2, TP53, WEE1 64 ATM(14), CCNA1(2), CCNB1(1), CCND1(2), CCND3(1), CCNE1(3), CDC25A(2), CDK2(4), CDK4(2), CDK7(2), CDKN1B(2), CDKN2A(7), CDKN2D(1), CREB3L1(1), CREB3L3(1), E2F3(1), E2F6(2), GADD45A(1), GBA2(1), MCM2(4), MCM3(3), MCM4(5), MCM5(1), MCM6(5), MCM7(1), MDM2(1), MNAT1(2), MYT1(5), NACA(1), ORC1L(2), ORC2L(1), ORC4L(1), ORC5L(3), POLE(12), PRIM1(2), RB1(5), RBL1(4), RPA2(1), TFDP1(2), TFDP2(1), TNXB(6), TP53(65), WEE1(1) 15025662 184 87 173 40 33 37 46 25 43 0 0.0370 1.000 1.000 302 HSA00230_PURINE_METABOLISM Genes involved in purine metabolism ADA, ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, ADK, ADSL, ADSS, ADSSL1, AK1, AK2, AK3L1, AK5, AK7, ALLC, AMPD1, AMPD2, AMPD3, APRT, ATIC, CANT1, DCK, DGUOK, ECGF1, ENPP1, ENPP3, ENTPD1, ENTPD2, ENTPD3, ENTPD4, ENTPD5, ENTPD6, ENTPD8, FHIT, GART, GDA, GMPR, GMPR2, GMPS, GUCY1A2, GUCY1A3, GUCY1B3, GUCY2C, GUCY2D, GUCY2F, GUK1, HPRT1, IMPDH1, IMPDH2, ITPA, NME1, NME2, NME4, NME6, NME7, NP, NPR1, NPR2, NT5C, NT5C1A, NT5C1B, NT5C2, NT5C3, NT5E, NT5M, NUDT2, NUDT5, NUDT9, PAICS, PAPSS1, PAPSS2, PDE10A, PDE11A, PDE1A, PDE1C, PDE2A, PDE3B, PDE4A, PDE4B, PDE4C, PDE4D, PDE5A, PDE6D, PDE6G, PDE6H, PDE7A, PDE7B, PDE8A, PDE8B, PDE9A, PFAS, PKLR, PKM2, PNPT1, POLA1, POLA2, POLD1, POLD2, POLD3, POLD4, POLE, POLE2, POLE3, POLE4, POLR1A, POLR1B, POLR1C, POLR1D, POLR2A, POLR2B, POLR2C, POLR2D, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR2L, POLR3A, POLR3B, POLR3G, POLR3GL, POLR3H, POLR3K, PPAT, PRIM1, PRIM2, PRPS1, PRPS1L1, PRPS2, PRUNE, RFC5, RRM1, RRM2, RRM2B, SAC, XDH, ZNRD1 142 ADCY1(8), ADCY2(6), ADCY3(2), ADCY4(5), ADCY5(5), ADCY6(5), ADCY7(3), ADCY8(13), ADCY9(1), ADSSL1(1), AK2(3), AK5(7), AK7(2), ALLC(2), AMPD1(5), AMPD2(3), AMPD3(2), ATIC(2), CANT1(1), DCK(1), DGUOK(2), ENPP1(3), ENPP3(5), ENTPD1(4), ENTPD2(2), ENTPD4(1), ENTPD6(1), FHIT(1), GART(1), GDA(5), GMPR(2), GMPS(5), GUCY1A2(3), GUCY1A3(6), GUCY1B3(2), GUCY2C(4), GUCY2F(8), GUK1(1), HPRT1(1), IMPDH1(3), NME7(3), NPR1(3), NPR2(2), NT5C1A(2), NT5C1B(1), NT5C3(1), NT5E(1), NT5M(1), NUDT2(2), NUDT5(1), NUDT9(1), PAPSS1(2), PAPSS2(1), PDE10A(9), PDE11A(7), PDE1A(5), PDE1C(11), PDE2A(5), PDE3B(3), PDE4B(4), PDE4C(1), PDE4D(4), PDE6D(1), PDE7A(1), PDE7B(1), PDE8A(1), PDE8B(4), PDE9A(2), PFAS(3), PKLR(4), PKM2(2), PNPT1(2), POLA1(1), POLD1(1), POLD3(2), POLE(12), POLR1A(5), POLR1B(8), POLR1D(1), POLR2A(6), POLR2B(1), POLR2C(2), POLR2D(2), POLR2E(1), POLR2G(2), POLR2H(2), POLR2L(1), POLR3A(7), POLR3B(10), POLR3H(1), PPAT(3), PRIM1(2), PRIM2(7), PRPS1(3), PRPS1L1(2), PRPS2(1), PRUNE(1), RRM1(5), RRM2(4), XDH(8) 31848939 329 87 327 123 62 96 86 43 42 0 0.952 1.000 1.000 303 HSA01030_GLYCAN_STRUCTURES_BIOSYNTHESIS_1 Genes involved in glycan structures - biosynthesis 1 A4GNT, ALG1, ALG10, ALG10B, ALG11, ALG12, ALG13, ALG14, ALG2, ALG3, ALG6, ALG8, ALG9, B3GALT6, B3GNT1, B3GNT2, B3GNT6, B3GNT7, B4GALT1, B4GALT2, B4GALT3, B4GALT4, B4GALT5, B4GALT7, C1GALT1, C1GALT1C1, ChGn, CHPF, CHST1, CHST11, CHST12, CHST13, CHST14, CHST2, CHST3, CHST4, CHST6, CHST7, CHSY-2, CHSY1, CSGlcA-T, DAD1, DDOST, DPAGT1, EXT1, EXT2, EXTL1, EXTL2, EXTL3, FUT11, FUT8, GALNAC4S-6ST, GALNACT-2, GALNT1, GALNT10, GALNT11, GALNT12, GALNT13, GALNT14, GALNT17, GALNT2, GALNT3, GALNT4, GALNT5, GALNT6, GALNT7, GALNT8, GALNT9, GALNTL1, GALNTL2, GALNTL4, GALNTL5, GANAB, GCNT1, GCNT3, GCNT4, GCS1, HS2ST1, HS3ST1, HS3ST2, HS3ST3A1, HS3ST3B1, HS3ST5, HS6ST1, HS6ST2, HS6ST3, LOC728969, MAN1A1, MAN1A2, MAN1B1, MAN1C1, MAN2A1, MGAT1, MGAT2, MGAT3, MGAT4A, MGAT4B, MGAT5, MGAT5B, NDST1, NDST2, NDST3, NDST4, OGT, RPN1, RPN2, ST3GAL1, ST3GAL2, ST3GAL3, ST3GAL4, ST6GAL1, ST6GALNAC1, STT3B, UST, WBSCR17, XYLT1, XYLT2 107 A4GNT(1), ALG10(5), ALG10B(3), ALG12(2), ALG13(5), ALG14(1), ALG2(4), ALG3(3), ALG8(1), ALG9(2), B3GNT1(3), B3GNT2(1), B3GNT6(2), B4GALT1(1), B4GALT2(2), B4GALT3(1), B4GALT4(1), B4GALT5(3), C1GALT1(2), C1GALT1C1(1), CHPF(1), CHST1(8), CHST12(3), CHST13(2), CHST2(4), CHST3(1), CHSY1(1), DPAGT1(1), EXT1(1), EXT2(5), EXTL1(1), EXTL3(4), FUT11(2), FUT8(4), GALNT1(1), GALNT10(1), GALNT11(1), GALNT12(3), GALNT13(9), GALNT14(6), GALNT2(1), GALNT3(2), GALNT4(3), GALNT5(4), GALNT6(2), GALNT7(4), GALNT8(6), GALNT9(1), GALNTL1(2), GALNTL2(5), GALNTL4(2), GALNTL5(2), GANAB(3), GCNT1(2), GCNT3(2), HS3ST1(1), HS3ST3A1(1), HS3ST5(6), HS6ST1(1), HS6ST3(1), MAN1A2(8), MAN1C1(2), MAN2A1(7), MGAT1(1), MGAT3(3), MGAT4A(2), MGAT4B(1), MGAT5(2), MGAT5B(1), NDST1(1), NDST2(5), NDST3(6), NDST4(6), OGT(1), RPN2(4), ST3GAL1(2), ST3GAL2(2), ST3GAL3(1), ST3GAL4(1), ST6GALNAC1(1), STT3B(1), UST(1), WBSCR17(8), XYLT1(13) 21336471 234 87 232 106 48 71 64 29 22 0 0.999 1.000 1.000 304 HSA04916_MELANOGENESIS Genes involved in melanogenesis ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, ASIP, CALM1, CALM2, CALM3, CALML3, CALML6, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CREB1, CREB3, CREB3L1, CREB3L2, CREB3L3, CREB3L4, CREBBP, CTNNB1, DCT, DVL1, DVL2, DVL3, EDN1, EDNRB, EP300, FZD1, FZD10, FZD2, FZD3, FZD4, FZD5, FZD6, FZD7, FZD8, FZD9, GNAI1, GNAI2, GNAI3, GNAO1, GNAQ, GNAS, GSK3B, HRAS, KIT, KITLG, KRAS, LEF1, LOC652788, MAP2K1, MAP2K2, MAPK1, MAPK3, MC1R, MITF, NRAS, PLCB1, PLCB2, PLCB3, PLCB4, POMC, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCG, PRKX, PRKY, RAF1, TCF7, TCF7L1, TCF7L2, TYR, TYRP1, WNT1, WNT10A, WNT10B, WNT11, WNT16, WNT2, WNT2B, WNT3, WNT3A, WNT4, WNT5A, WNT5B, WNT6, WNT7A, WNT7B, WNT8A, WNT8B, WNT9A, WNT9B 99 ADCY1(8), ADCY2(6), ADCY3(2), ADCY4(5), ADCY5(5), ADCY6(5), ADCY7(3), ADCY8(13), ADCY9(1), CALM1(1), CALML3(2), CAMK2A(1), CAMK2D(1), CAMK2G(2), CREB3L1(1), CREB3L2(3), CREB3L3(1), CREBBP(2), CTNNB1(9), DCT(4), DVL2(1), DVL3(2), EDNRB(2), EP300(1), FZD1(2), FZD10(5), FZD2(1), FZD3(3), FZD4(3), FZD7(1), FZD9(1), GNAI1(1), GNAI3(1), GNAO1(2), GNAQ(2), GNAS(3), GSK3B(1), HRAS(1), KIT(3), KRAS(35), LEF1(6), MAP2K1(4), MAPK3(1), MITF(1), NRAS(1), PLCB1(9), PLCB2(4), PLCB3(3), PLCB4(10), PRKACB(2), PRKACG(1), PRKCA(7), PRKCG(5), PRKX(3), RAF1(2), TCF7(1), TCF7L1(1), TCF7L2(2), TYR(6), TYRP1(2), WNT1(3), WNT10A(2), WNT10B(2), WNT11(1), WNT16(2), WNT2(2), WNT3A(2), WNT4(1), WNT5A(1), WNT5B(1), WNT6(1), WNT7A(4), WNT7B(2), WNT8A(1), WNT8B(1), WNT9A(2), WNT9B(2) 21114333 247 87 214 96 43 89 67 28 20 0 0.936 1.000 1.000 305 HSA04630_JAK_STAT_SIGNALING_PATHWAY Genes involved in Jak-STAT signaling pathway AKT1, AKT2, AKT3, BCL2L1, CBL, CBLB, CBLC, CCND1, CCND2, CCND3, CISH, CLCF1, CNTF, CNTFR, CREBBP, CRLF2, CSF2, CSF2RA, CSF2RB, CSF3, CSF3R, CTF1, EP300, EPO, EPOR, GH1, GH2, GHR, GRB2, IFNA1, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA2, IFNA21, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, IFNAR1, IFNAR2, IFNB1, IFNE1, IFNG, IFNGR1, IFNGR2, IFNK, IFNW1, IL10, IL10RA, IL10RB, IL11, IL11RA, IL12A, IL12B, IL12RB1, IL12RB2, IL13, IL13RA1, IL13RA2, IL15, IL15RA, IL19, IL2, IL20, IL20RA, IL21, IL21R, IL22, IL22RA1, IL22RA2, IL23A, IL23R, IL24, IL26, IL28A, IL28B, IL28RA, IL29, IL2RA, IL2RB, IL2RG, IL3, IL3RA, IL4, IL4R, IL5, IL5RA, IL6, IL6R, IL6ST, IL7, IL7R, IL9, IL9R, IRF9, JAK1, JAK2, JAK3, LEP, LEPR, LIF, LIFR, MPL, MYC, OSM, OSMR, PIAS1, PIAS2, PIAS3, PIAS4, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PIM1, PRL, PRLR, PTPN11, PTPN6, SOCS1, SOCS2, SOCS3, SOCS4, SOCS5, SOCS7, SOS1, SOS2, SPRED1, SPRED2, SPRY1, SPRY2, SPRY3, SPRY4, STAM, STAM2, STAT1, STAT2, STAT3, STAT4, STAT5A, STAT5B, STAT6, TPO, TSLP, TYK2 150 AKT2(1), AKT3(2), CBL(7), CBLB(2), CCND1(2), CCND3(1), CNTFR(1), CREBBP(2), CSF2RA(5), CSF2RB(3), CSF3R(3), EP300(1), EPO(1), GH1(2), GH2(3), GHR(1), GRB2(3), IFNA10(1), IFNA14(3), IFNA16(1), IFNA17(1), IFNA2(3), IFNA21(1), IFNA4(1), IFNA6(2), IFNA7(3), IFNA8(1), IFNAR2(1), IFNB1(3), IFNG(3), IFNGR1(3), IFNGR2(2), IFNW1(1), IL10RA(3), IL10RB(2), IL12A(2), IL12RB1(2), IL12RB2(6), IL13RA2(2), IL15(1), IL15RA(1), IL2(3), IL20RA(1), IL21R(7), IL22(2), IL22RA2(1), IL23R(1), IL24(3), IL28B(2), IL28RA(2), IL2RA(3), IL2RB(4), IL3(1), IL3RA(4), IL4R(5), IL5RA(1), IL6R(5), IL7R(6), IL9R(2), IRF9(1), JAK1(5), JAK2(2), JAK3(3), LEP(2), LEPR(8), LIF(2), LIFR(5), MPL(1), OSM(2), OSMR(4), PIAS2(4), PIAS3(4), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PRLR(7), PTPN11(1), PTPN6(2), SOCS4(1), SOCS5(1), SOS1(9), SOS2(5), SPRED1(1), SPRED2(2), SPRY1(1), SPRY2(2), SPRY3(4), SPRY4(2), STAM(3), STAM2(2), STAT1(2), STAT2(2), STAT3(4), STAT4(5), STAT5A(2), STAT5B(3), STAT6(1), TPO(9), TSLP(3), TYK2(2) 28162506 281 86 279 108 30 93 70 50 38 0 0.992 1.000 1.000 306 PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM ACVR1, ACVR1B, ACVRL1, AKT1, AURKB, BMPR1A, BMPR2, BUB1, CDC2L5, CDIPT, CDKL1, CDKL2, CDS1, CDS2, CLK1, CLK2, CLK4, COL4A3BP, CSNK2A1, CSNK2A1, CSNK2A1P, CSNK2A2, CSNK2B, DGKA, DGKB, DGKD, DGKE, DGKG, DGKH, DGKQ, DGKZ, IMPA1, INPP1, INPP4A, INPP4B, INPP5A, INPPL1, ITPKA, ITPKB, MAP3K10, MOS, NEK1, NEK3, OCRL, PAK4, PCTK1, PCTK2, PIK3C2A, PIK3C2B, PIK3C2G, PIK3CA, PIK3CB, PIK3CG, PIK4CA, PIK4CA, LOC220686, PIM2, PIP5K2B, PLCB1, PLCB2, PLCB3, PLCB4, PLCD1, PLCG1, PLCG2, PLK3, PRKACA, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCG, PRKCH, PRKCQ, PRKCZ, PRKD1, PRKG1, RAF1, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA4, RPS6KB1, STK11, TGFBR1, VRK1 82 ACVR1(2), ACVR1B(4), ACVRL1(3), BMPR1A(1), BMPR2(2), BUB1(4), CDIPT(1), CDKL2(1), CDS1(2), CDS2(2), CLK1(2), CLK2(5), CLK4(5), DGKA(2), DGKB(8), DGKD(2), DGKE(3), DGKG(4), DGKZ(3), IMPA1(1), INPP1(1), INPP4A(3), INPP4B(10), INPP5A(3), INPPL1(3), ITPKA(1), ITPKB(4), MAP3K10(1), NEK1(3), NEK3(2), OCRL(1), PAK4(1), PIK3C2A(6), PIK3C2B(5), PIK3C2G(3), PIK3CA(5), PIK3CB(2), PIK3CG(6), PLCB1(9), PLCB2(4), PLCB3(3), PLCB4(10), PLCD1(1), PLCG1(4), PLCG2(4), PLK3(1), PRKACB(2), PRKACG(1), PRKAR1B(4), PRKCA(7), PRKCD(1), PRKCE(1), PRKCG(5), PRKCH(2), PRKCQ(3), PRKD1(8), PRKG1(1), RAF1(2), RPS6KA2(2), RPS6KA3(1), RPS6KA4(1), STK11(18), TGFBR1(2), VRK1(1) 22040940 215 85 212 76 38 55 57 29 36 0 0.896 1.000 1.000 307 HSA04370_VEGF_SIGNALING_PATHWAY Genes involved in VEGF signaling pathway AKT1, AKT2, AKT3, BAD, CASP9, CDC42, CHP, HRAS, KDR, KRAS, MAP2K1, MAP2K2, MAPK1, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPKAPK2, MAPKAPK3, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NOS3, NRAS, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLCG1, PLCG2, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRKCA, PRKCB1, PRKCG, PTGS2, PTK2, PXN, RAC1, RAC2, RAC3, RAF1, SH2D2A, SHC2, SPHK1, SPHK2, SRC, VEGFA 69 AKT2(1), AKT3(2), CASP9(2), CDC42(2), HRAS(1), KDR(16), KRAS(35), MAP2K1(4), MAPK14(1), MAPK3(1), MAPKAPK2(2), MAPKAPK3(1), NFAT5(4), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), NOS3(1), NRAS(1), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PLA2G10(1), PLA2G12B(1), PLA2G1B(1), PLA2G2A(3), PLA2G2E(1), PLA2G2F(1), PLA2G3(4), PLA2G4A(5), PLA2G6(1), PLCG1(4), PLCG2(4), PPP3CA(2), PPP3CB(1), PPP3CC(1), PPP3R1(2), PPP3R2(2), PRKCA(7), PRKCG(5), PTGS2(4), PTK2(7), RAF1(2), SH2D2A(7), SHC2(1), SPHK2(1), SRC(2), VEGFA(1) 14018946 180 84 146 55 28 68 38 29 17 0 0.532 1.000 1.000 308 HSA00500_STARCH_AND_SUCROSE_METABOLISM Genes involved in starch and sucrose metabolism AGL, AMY1A, AMY1B, AMY1C, AMY2A, AMY2B, ASCC3, ASCC3L1, ATP13A2, DDX18, DDX19A, DDX23, DDX4, DDX41, DDX47, DDX50, DDX51, DDX52, DDX54, DDX55, DDX56, DHX58, ENPP1, ENPP3, ENTPD7, EP400, ERCC2, ERCC3, G6PC, G6PC2, GAA, GANC, GBA, GBA3, GBE1, GCK, GPI, GUSB, GYS1, GYS2, HK1, HK2, HK3, IFIH1, LYZL1, MGAM, MOV10L1, NUDT5, NUDT8, PGM1, PGM3, PYGB, PYGL, PYGM, RAD54B, RAD54L, RUVBL2, SETX, SI, SKIV2L2, SMARCA2, SMARCA5, TREH, UGDH, UGP2, UGT1A1, UGT1A10, UGT1A3, UGT1A4, UGT1A5, UGT1A6, UGT1A7, UGT1A8, UGT1A9, UGT2A1, UGT2A3, UGT2B10, UGT2B11, UGT2B15, UGT2B17, UGT2B28, UGT2B4, UGT2B7, UXS1 80 AGL(11), AMY2A(4), AMY2B(15), ASCC3(8), ATP13A2(4), DDX18(1), DDX19A(1), DDX23(5), DDX4(2), DDX41(1), DDX47(1), DDX50(4), DDX52(2), DDX54(1), DDX55(1), DDX56(1), ENPP1(3), ENPP3(5), ENTPD7(1), EP400(4), ERCC2(2), ERCC3(4), G6PC(1), G6PC2(1), GAA(1), GANC(1), GBA(3), GBA3(7), GBE1(1), GCK(1), GPI(3), GUSB(2), GYS1(1), GYS2(1), HK1(3), HK2(5), HK3(5), IFIH1(4), MGAM(15), MOV10L1(5), NUDT5(1), NUDT8(1), PGM1(2), PGM3(2), PYGB(1), PYGM(3), RAD54B(6), RUVBL2(1), SETX(11), SI(31), SKIV2L2(9), SMARCA2(6), SMARCA5(1), TREH(1), UGDH(3), UGP2(1), UGT1A1(3), UGT1A10(3), UGT1A3(3), UGT1A4(1), UGT1A5(1), UGT1A6(2), UGT1A7(2), UGT1A9(4), UGT2A1(3), UGT2A3(4), UGT2B10(11), UGT2B11(9), UGT2B15(4), UGT2B28(6), UGT2B4(6), UGT2B7(5), UXS1(4) 24189564 292 83 290 97 51 108 73 28 31 1 0.865 1.000 1.000 309 HSA04115_P53_SIGNALING_PATHWAY Genes involved in p53 signaling pathway APAF1, ATM, ATR, BAI1, BAX, BBC3, BID, CASP3, CASP8, CASP9, CCNB1, CCNB2, CCNB3, CCND1, CCND2, CCND3, CCNE1, CCNE2, CCNG1, CCNG2, CD82, CDC2, CDK2, CDK4, CDK6, CDKN1A, CDKN2A, CHEK1, CHEK2, CYCS, DDB2, EI24, FAS, GADD45A, GADD45B, GADD45G, GTSE1, IGF1, IGFBP3, LRDD, MDM2, MDM4, P53AIP1, PERP, PMAIP1, PPM1D, PTEN, RCHY1, RFWD2, RPRM, RRM2, RRM2B, SCOTIN, SERPINB5, SERPINE1, SESN1, SESN2, SESN3, SFN, SIAH1, STEAP3, THBS1, TNFRSF10B, TP53, TP53I3, TP73, TSC2, ZMAT3 64 APAF1(4), ATM(14), ATR(9), BAI1(5), BAX(1), BID(1), CASP3(4), CASP8(3), CASP9(2), CCNB1(1), CCNB3(4), CCND1(2), CCND3(1), CCNE1(3), CD82(1), CDK2(4), CDK4(2), CDKN2A(7), CHEK1(6), CHEK2(2), EI24(1), FAS(2), GADD45A(1), GTSE1(1), IGF1(3), IGFBP3(2), LRDD(1), MDM2(1), PPM1D(2), PTEN(3), RRM2(4), SERPINB5(3), SERPINE1(3), SESN2(1), THBS1(4), TNFRSF10B(1), TP53(65), TP53I3(1), TP73(3), TSC2(2), ZMAT3(1) 12734493 181 82 169 42 26 42 42 32 39 0 0.111 1.000 1.000 310 HSA04662_B_CELL_RECEPTOR_SIGNALING_PATHWAY Genes involved in B cell receptor signaling pathway AKT1, AKT2, AKT3, BCL10, BLNK, BTK, CARD11, CD19, CD22, CD72, CD79A, CD79B, CD81, CHP, CHUK, CR2, FCGR2B, FOS, GSK3B, HRAS, IFITM1, IKBKB, IKBKG, INPP5D, JUN, KRAS, LILRB3, LYN, MALT1, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NRAS, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLCG2, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRKCB1, PTPN6, RAC1, RAC2, RAC3, RASGRP3, SYK, VAV1, VAV2, VAV3 62 AKT2(1), AKT3(2), BCL10(1), BTK(7), CARD11(11), CD19(1), CD22(3), CD72(1), CD79B(1), CHUK(1), CR2(4), FCGR2B(2), GSK3B(1), HRAS(1), IKBKB(2), INPP5D(3), KRAS(35), LYN(3), MALT1(2), NFAT5(4), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), NFKB1(2), NFKB2(3), NFKBIE(1), NRAS(1), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PLCG2(4), PPP3CA(2), PPP3CB(1), PPP3CC(1), PPP3R1(2), PPP3R2(2), PTPN6(2), RASGRP3(5), SYK(1), VAV1(1), VAV2(2), VAV3(9) 14446968 160 82 127 55 18 63 43 18 18 0 0.829 1.000 1.000 311 INTEGRIN_MEDIATED_CELL_ADHESION_KEGG AKT1, AKT3, BCAR1, CAPN1, CAPN10, CAPN11, CAPN2, CAPN3, CAPN5, CAPN6, CAPN7, CAPN9, CAPNS1, CAV1, CAV2, CAV3, CDC42, CRK, CSK, DKFZp434E1119, DOCK1, FLJ14825, FLJ40125, FYN, GIT2, GRB2, ILK, ITGA10, ITGA11, ITGA2, ITGA2B, ITGA3, ITGA4, ITGA5, ITGA6, ITGA7, ITGA8, ITGA9, ITGAD, ITGAE, ITGAL, ITGAM, ITGAV, ITGAX, ITGB1, ITGB2, ITGB3, ITGB4, ITGB5, ITGB6, ITGB7, ITGB8, LOC283874, PDPK1, MAP2K1, MAP2K2, MAP2K3, MAP2K6, MAPK10, MAPK12, MAPK4, MAPK6, MAPK7, MGC17301, MYLK2, PAK1, PAK2, PAK3, PAK4, PAK6, PDPK1, PIK3R2, PTK2, PXN, RAC1, RAC2, RAC3, RAP1B, RAPGEF1, RHO, ROCK1, ROCK2, SDCCAG8, SEPP1, SHC1, SHC3, SORBS1, SOS1, SRC, TLN1, TNS, TNS1, VASP, VAV2, VAV3, VCL, ZYX 90 AKT3(2), BCAR1(1), CAPN10(3), CAPN11(4), CAPN3(4), CAPN5(7), CAPN6(7), CAPN7(2), CAPN9(4), CDC42(2), DOCK1(4), FYN(2), GIT2(1), GRB2(3), ITGA10(2), ITGA11(5), ITGA2(4), ITGA2B(3), ITGA3(1), ITGA4(11), ITGA5(4), ITGA6(3), ITGA7(2), ITGA8(15), ITGA9(1), ITGAD(12), ITGAE(6), ITGAL(17), ITGAM(9), ITGAV(5), ITGAX(11), ITGB1(2), ITGB2(2), ITGB3(2), ITGB4(3), ITGB5(6), ITGB6(1), ITGB7(1), ITGB8(1), MAP2K1(4), MAP2K3(3), MAPK10(1), MAPK4(5), MAPK7(4), MYLK2(2), PAK1(5), PAK2(3), PAK3(2), PAK4(1), PIK3R2(1), PTK2(7), RAP1B(1), RAPGEF1(1), ROCK1(7), ROCK2(3), SDCCAG8(6), SHC1(2), SHC3(2), SORBS1(4), SOS1(9), SRC(2), TLN1(9), TNS1(8), VAV2(2), VAV3(9), VCL(2), ZYX(2) 26089992 282 82 282 104 53 85 61 39 43 1 0.939 1.000 1.000 312 HSA02010_ABC_TRANSPORTERS_GENERAL Genes involved in ABC transporters - general ABCA1, ABCA10, ABCA12, ABCA13, ABCA2, ABCA3, ABCA4, ABCA5, ABCA6, ABCA7, ABCA8, ABCA9, ABCB1, ABCB10, ABCB11, ABCB4, ABCB5, ABCB6, ABCB7, ABCB8, ABCB9, ABCC1, ABCC10, ABCC11, ABCC12, ABCC2, ABCC3, ABCC4, ABCC5, ABCC6, ABCC8, ABCC9, ABCD1, ABCD2, ABCD3, ABCD4, ABCG1, ABCG2, ABCG4, ABCG5, ABCG8, CFTR, TAP1, TAP2 44 ABCA1(7), ABCA10(8), ABCA12(14), ABCA13(29), ABCA2(4), ABCA3(4), ABCA4(18), ABCA5(5), ABCA6(5), ABCA7(4), ABCA8(6), ABCA9(5), ABCB1(10), ABCB10(6), ABCB11(5), ABCB4(10), ABCB5(16), ABCB6(1), ABCB7(2), ABCB8(3), ABCB9(3), ABCC1(3), ABCC10(2), ABCC11(7), ABCC12(9), ABCC2(5), ABCC3(3), ABCC4(4), ABCC5(5), ABCC6(3), ABCC8(7), ABCC9(15), ABCD2(4), ABCD3(5), ABCG1(2), ABCG2(3), ABCG4(2), ABCG5(7), ABCG8(4), CFTR(5), TAP2(3) 23078100 263 81 263 87 46 83 63 39 32 0 0.597 1.000 1.000 313 HSA04350_TGF_BETA_SIGNALING_PATHWAY Genes involved in TGF-beta signaling pathway ACVR1, ACVR1B, ACVR1C, ACVR2A, ACVR2B, ACVRL1, AMH, AMHR2, BMP2, BMP4, BMP5, BMP6, BMP7, BMP8A, BMP8B, BMPR1A, BMPR1B, BMPR2, CDKN2B, CHRD, COMP, CREBBP, CUL1, DCN, E2F4, E2F5, EP300, FST, GDF5, GDF6, GDF7, hCG_1982709, ID1, ID2, ID3, ID4, IFNG, INHBA, INHBB, INHBC, INHBE, LEFTY1, LEFTY2, LTBP1, MAPK1, MAPK3, MYC, NODAL, NOG, PITX2, PPP2CA, PPP2CB, PPP2R1A, PPP2R1B, PPP2R2A, PPP2R2B, PPP2R2C, RBL1, RBL2, RBX1, RHOA, ROCK1, ROCK2, RPS6KB1, RPS6KB2, SKP1, SMAD1, SMAD2, SMAD3, SMAD4, SMAD5, SMAD6, SMAD7, SMAD9, SMURF1, SMURF2, SP1, TFDP1, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, THBS1, THBS2, THBS3, THBS4, TNF, ZFYVE16, ZFYVE9 88 ACVR1(2), ACVR1B(4), ACVR1C(2), ACVR2A(1), ACVR2B(3), ACVRL1(3), AMH(1), BMP2(1), BMP4(2), BMP5(3), BMP6(2), BMP7(3), BMP8A(1), BMPR1A(1), BMPR1B(3), BMPR2(2), CHRD(8), COMP(1), CREBBP(2), CUL1(3), DCN(1), EP300(1), FST(2), GDF5(3), GDF6(3), IFNG(3), INHBA(7), INHBB(1), INHBC(1), INHBE(2), LEFTY1(2), LEFTY2(2), LTBP1(14), MAPK3(1), NODAL(1), PITX2(3), PPP2CB(2), PPP2R1A(3), PPP2R1B(1), PPP2R2A(3), PPP2R2B(4), PPP2R2C(3), RBL1(4), RBL2(1), RHOA(1), ROCK1(7), ROCK2(3), RPS6KB2(1), SKP1(1), SMAD1(1), SMAD2(2), SMAD3(3), SMAD4(6), SMAD5(1), SMAD9(1), SMURF1(2), SMURF2(2), TFDP1(2), TGFB1(2), TGFB2(5), TGFB3(1), TGFBR1(2), THBS1(4), THBS2(12), THBS3(1), THBS4(4), ZFYVE16(1), ZFYVE9(2) 19241511 183 81 183 63 32 45 49 30 27 0 0.772 1.000 1.000 314 HSA04664_FC_EPSILON_RI_SIGNALING_PATHWAY Genes involved in Fc epsilon RI signaling pathway AKT1, AKT2, AKT3, BTK, CSF2, FCER1A, FCER1G, FYN, GAB2, GRB2, HRAS, IL13, IL3, IL4, IL5, INPP5D, KRAS, LAT, LCP2, LYN, MAP2K1, MAP2K2, MAP2K3, MAP2K4, MAP2K6, MAP2K7, MAPK1, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPK8, MAPK9, MS4A2, NRAS, PDK1, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLCG1, PLCG2, PRKCA, PRKCB1, PRKCD, PRKCE, RAC1, RAC2, RAC3, RAF1, SOS1, SOS2, SYK, TNF, VAV1, VAV2, VAV3 74 AKT2(1), AKT3(2), BTK(7), FCER1A(5), FCER1G(1), FYN(2), GAB2(1), GRB2(3), HRAS(1), IL3(1), INPP5D(3), KRAS(35), LAT(3), LCP2(3), LYN(3), MAP2K1(4), MAP2K3(3), MAP2K4(2), MAP2K7(1), MAPK10(1), MAPK14(1), MAPK3(1), MAPK8(3), MAPK9(5), MS4A2(2), NRAS(1), PDK1(2), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PLA2G10(1), PLA2G12B(1), PLA2G1B(1), PLA2G2A(3), PLA2G2E(1), PLA2G2F(1), PLA2G3(4), PLA2G4A(5), PLA2G6(1), PLCG1(4), PLCG2(4), PRKCA(7), PRKCD(1), PRKCE(1), RAF1(2), SOS1(9), SOS2(5), SYK(1), VAV1(1), VAV2(2), VAV3(9) 14046552 181 81 148 51 23 66 47 28 17 0 0.402 1.000 1.000 315 HSA04610_COMPLEMENT_AND_COAGULATION_CASCADES Genes involved in complement and coagulation cascades A2M, BDKRB1, BDKRB2, C1QA, C1QB, C1QC, C1R, C1S, C2, C3, C3AR1, C4A, C4B, C4BPA, C4BPB, C5, C5AR1, C6, C7, C8A, C8B, C8G, C9, CD46, CD55, CD59, CFB, CFD, CFH, CFI, CPB2, CR1, CR2, F10, F11, F12, F13A1, F13B, F2, F2R, F3, F5, F7, F8, F9, FGA, FGB, FGG, KLKB1, KNG1, MASP1, MASP2, MBL2, PLAT, PLAU, PLAUR, PLG, PROC, PROS1, SERPINA1, SERPINA5, SERPINC1, SERPIND1, SERPINE1, SERPINF2, SERPING1, TFPI, THBD, VWF 67 A2M(8), C1QB(2), C1QC(1), C1R(1), C1S(1), C2(1), C3(3), C3AR1(2), C4BPA(2), C5(1), C5AR1(2), C6(7), C7(14), C8A(2), C8B(7), C9(7), CD46(1), CD55(2), CFB(3), CFH(12), CFI(3), CR1(8), CR2(4), F10(1), F11(5), F12(1), F13A1(7), F13B(9), F2(5), F2R(2), F3(4), F5(17), F7(2), F8(14), F9(8), FGA(2), FGB(10), FGG(2), KLKB1(3), MASP1(2), MASP2(1), PLAT(4), PLG(8), PROC(2), PROS1(10), SERPINA1(1), SERPINA5(2), SERPINC1(5), SERPINE1(3), SERPING1(2), TFPI(1), VWF(7) 17627205 234 80 233 84 29 80 56 38 28 3 0.986 1.000 1.000 316 PURINE_METABOLISM 1_Sep, ADA, ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADK, ADSL, ADSS, AK1, AK2, AK5, ALLC, AMPD1, AMPD2, AMPD3, APRT, ATIC, ATP1B1, ATP5A1, ATP5B, ATP5C1, ATP5D, ATP5F1, ATP5G1, ATP5G2, ATP5G3, ATP5H, ATP5I, ATP5J, ATP5J2, CANT1, DCK, DGUOK, ECGF1, ENPP1, ENPP3, ENTPD1, ENTPD2, FHIT, GART, GDA, GMPS, GUCY1A2, GUCY1A3, GUCY1B2, GUCY1B3, GUCY2C, GUCY2D, GUCY2F, GUK1, HPRT1, IMPDH1, IMPDH2, ITPA, NME1, NME2, NP, NPR1, NPR2, NT5C, NT5E, NT5M, NUDT2, PAICS, PAPSS1, PAPSS2, PDE1A, PDE4A, PDE4B, PDE4C, PDE4D, PDE5A, PDE6B, PDE6C, PDE6G, PDE7B, PDE8A, PDE9A, PFAS, PKLR, PKM2, POLA, POLB, POLD1, POLD2, POLE, POLG, POLL, POLQ, POLR1B, POLR2A, POLR2B, POLR2C, POLR2D, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR2L, POLRMT, POLS, PPAT, PRPS1, PRPS1L1, PRPS2, PRUNE, RRM1, RRM2, SAC 110 ADCY1(8), ADCY2(6), ADCY3(2), ADCY4(5), ADCY5(5), ADCY6(5), ADCY7(3), ADCY8(13), AK2(3), AK5(7), ALLC(2), AMPD1(5), AMPD2(3), AMPD3(2), ATIC(2), ATP5A1(2), ATP5B(1), ATP5C1(2), ATP5F1(1), ATP5G3(1), CANT1(1), DCK(1), DGUOK(2), ENPP1(3), ENPP3(5), ENTPD1(4), ENTPD2(2), FHIT(1), GART(1), GDA(5), GMPS(5), GUCY1A2(3), GUCY1A3(6), GUCY1B3(2), GUCY2C(4), GUCY2F(8), GUK1(1), HPRT1(1), IMPDH1(3), NPR1(3), NPR2(2), NT5E(1), NT5M(1), NUDT2(2), PAPSS1(2), PAPSS2(1), PDE1A(5), PDE4B(4), PDE4C(1), PDE4D(4), PDE6B(3), PDE6C(2), PDE7B(1), PDE8A(1), PDE9A(2), PFAS(3), PKLR(4), PKM2(2), POLB(2), POLD1(1), POLE(12), POLG(8), POLQ(10), POLR1B(8), POLR2A(6), POLR2B(1), POLR2C(2), POLR2D(2), POLR2E(1), POLR2G(2), POLR2H(2), POLR2L(1), POLRMT(1), PPAT(3), PRPS1(3), PRPS1L1(2), PRPS2(1), PRUNE(1), RRM1(5), RRM2(4) 24951438 258 80 256 97 52 65 75 35 31 0 0.927 1.000 1.000 317 HSA04070_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM Genes involved in phosphatidylinositol signaling system CALM1, CALM2, CALM3, CALML3, CALML6, CARKL, CDIPT, CDS1, CDS2, DGKA, DGKB, DGKD, DGKE, DGKG, DGKH, DGKI, DGKQ, DGKZ, FN3K, IMPA1, IMPA2, INPP1, INPP4A, INPP4B, INPP5A, INPP5B, INPP5D, INPP5E, INPPL1, ITGB1BP3, ITPK1, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, OCRL, PI4KA, PI4KB, PIB5PA, PIK3C2A, PIK3C2B, PIK3C2G, PIK3C3, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PIP4K2A, PIP4K2B, PIP4K2C, PIP5K1A, PIP5K1B, PIP5K1C, PIP5K3, PLCB1, PLCB2, PLCB3, PLCB4, PLCD1, PLCD3, PLCD4, PLCE1, PLCG1, PLCG2, PLCZ1, PRKCA, PRKCB1, PRKCG, PTEN, PTPMT1, SKIP, SYNJ1, SYNJ2 73 CALM1(1), CALML3(2), CDIPT(1), CDS1(2), CDS2(2), DGKA(2), DGKB(8), DGKD(2), DGKE(3), DGKG(4), DGKI(12), DGKZ(3), IMPA1(1), IMPA2(1), INPP1(1), INPP4A(3), INPP4B(10), INPP5A(3), INPP5B(1), INPP5D(3), INPPL1(3), ITGB1BP3(2), ITPK1(1), ITPKA(1), ITPKB(4), ITPR1(7), ITPR2(15), ITPR3(4), OCRL(1), PI4KA(6), PI4KB(3), PIK3C2A(6), PIK3C2B(5), PIK3C2G(3), PIK3C3(4), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PIP4K2A(1), PIP4K2B(2), PIP4K2C(3), PIP5K1A(5), PIP5K1B(5), PIP5K1C(2), PLCB1(9), PLCB2(4), PLCB3(3), PLCB4(10), PLCD1(1), PLCD3(1), PLCD4(1), PLCE1(8), PLCG1(4), PLCG2(4), PLCZ1(2), PRKCA(7), PRKCG(5), PTEN(3), PTPMT1(1), SYNJ1(3), SYNJ2(1) 24418410 235 79 232 80 42 75 62 27 28 1 0.801 1.000 1.000 318 HISTONE_METHYLTRANSFERASE Genes with HMT activity AOF2, KDM6A, ASH1L, ASH2L, C17orf79, CARM1, CTCFL, DOT1L, EED, EHMT1, EHMT2, EZH1, EZH2, FBXL10, FBXL11, FBXO11, HCFC1, HSF4, JMJD1A, JMJD1B, JMJD2A, JMJD2B, JMJD2C, JMJD2D, JMJD3, JMJD4, JMJD6, MEN1, MLL, MLL2, MLL3, MLL4, MLL5, NSD1, OGT, PAXIP1, PPP1CA, PPP1CB, PPP1CC, PRDM2, PRDM6, PRDM7, PRDM9, PRMT1, PRMT5, PRMT6, PRMT7, PRMT8, RBBP5, SATB1, SETD1A, SETD1B, SETD2, SETD7, SETD8, SETDB1, SETDB2, SETMAR, SMYD3, STK38, SUV39H1, SUV39H2, SUV420H1, SUV420H2, SUZ12, WHSC1, WHSC1L1 55 ASH1L(15), CARM1(3), CTCFL(13), DOT1L(6), EED(3), EHMT1(4), EHMT2(1), EZH1(1), EZH2(6), FBXO11(1), HCFC1(6), HSF4(1), JMJD4(1), KDM6A(1), MEN1(2), MLL(7), MLL2(17), MLL3(33), MLL4(1), MLL5(2), NSD1(7), OGT(1), PAXIP1(3), PPP1CA(1), PPP1CB(1), PPP1CC(1), PRDM2(4), PRDM7(2), PRDM9(17), PRMT5(1), PRMT6(2), PRMT7(3), PRMT8(5), RBBP5(2), SATB1(2), SETD1A(5), SETD2(16), SETD8(2), SETDB1(3), SETDB2(2), SETMAR(1), SMYD3(3), STK38(2), SUV39H1(1), SUV39H2(2), SUV420H1(2), WHSC1(2), WHSC1L1(1) 23026242 218 78 217 65 40 58 66 20 31 3 0.429 1.000 1.000 319 HSA04920_ADIPOCYTOKINE_SIGNALING_PATHWAY Genes involved in adipocytokine signaling pathway ACACB, ACSL1, ACSL3, ACSL4, ACSL5, ACSL6, ADIPOQ, ADIPOR1, ADIPOR2, AGRP, AKT1, AKT2, AKT3, CAMKK1, CAMKK2, CD36, CHUK, CPT1A, CPT1B, CPT1C, CPT2, FRAP1, G6PC, G6PC2, IKBKB, IKBKG, IRS1, IRS2, IRS4, JAK1, JAK2, JAK3, LEP, LEPR, MAPK10, MAPK8, MAPK9, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NPY, PCK1, PCK2, POMC, PPARA, PPARGC1A, PRKAA1, PRKAA2, PRKAB1, PRKAB2, PRKAG1, PRKAG2, PRKAG3, PRKCQ, PTPN11, RELA, RXRA, RXRB, RXRG, SLC2A1, SLC2A4, SOCS3, STAT3, STK11, TNF, TNFRSF1A, TNFRSF1B, TRADD, TRAF2, TYK2 70 ACACB(7), ACSL1(4), ACSL3(1), ACSL4(1), ACSL5(1), ACSL6(6), ADIPOQ(2), ADIPOR1(3), ADIPOR2(1), AKT2(1), AKT3(2), CAMKK1(2), CAMKK2(1), CD36(3), CHUK(1), CPT1A(5), CPT1B(3), CPT1C(2), CPT2(2), G6PC(1), G6PC2(1), IKBKB(2), IRS1(12), IRS2(2), IRS4(7), JAK1(5), JAK2(2), JAK3(3), LEP(2), LEPR(8), MAPK10(1), MAPK8(3), MAPK9(5), NFKB1(2), NFKB2(3), NFKBIE(1), PCK1(8), PCK2(1), PPARGC1A(7), PRKAA1(1), PRKAB1(3), PRKAG2(4), PRKAG3(1), PRKCQ(3), PTPN11(1), RXRG(6), STAT3(4), STK11(18), TNFRSF1B(1), TYK2(2) 16100232 168 77 167 66 32 50 32 28 26 0 0.933 1.000 1.000 320 ST_G_ALPHA_I_PATHWAY Gi and Go proteins are members of the same family that transduce cellular signals through both their alpha and beta subunits. AKT1, AKT2, AKT3, ASAH1, BF, BRAF, DAG1, DRD2, EGFR, EPHB2, GRB2, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, KCNJ3, KCNJ5, KCNJ9, MAPK1, PI3, PIK3CB, PITX2, PLCB1, PLCB2, PLCB3, PLCB4, RAF1, RAP1GA1, RGS20, SHC1, SOS1, SOS2, SRC, STAT3, TERF2IP 34 AKT2(1), AKT3(2), ASAH1(2), BRAF(13), DAG1(2), DRD2(7), EGFR(24), EPHB2(4), GRB2(3), ITPKA(1), ITPKB(4), ITPR1(7), ITPR2(15), ITPR3(4), KCNJ3(10), PI3(1), PIK3CB(2), PITX2(3), PLCB1(9), PLCB2(4), PLCB3(3), PLCB4(10), RAF1(2), RGS20(2), SHC1(2), SOS1(9), SOS2(5), SRC(2), STAT3(4) 11402826 157 77 142 35 24 46 40 27 20 0 0.0670 1.000 1.000 321 HSA04640_HEMATOPOIETIC_CELL_LINEAGE Genes involved in hematopoietic cell lineage ANPEP, CD14, CD19, CD1A, CD1B, CD1C, CD1D, CD1E, CD2, CD22, CD24, CD33, CD34, CD36, CD37, CD38, CD3D, CD3E, CD3G, CD4, CD44, CD5, CD55, CD59, CD7, CD8A, CD8B, CD9, CR1, CR2, CSF1, CSF1R, CSF2, CSF2RA, CSF3, CSF3R, DNTT, EPO, EPOR, FCER2, FCGR1A, FLT3, FLT3LG, GP1BA, GP1BB, GP5, GP9, GYPA, HLA-DRA, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, IL11, IL11RA, IL1A, IL1B, IL1R1, IL1R2, IL2RA, IL3, IL3RA, IL4, IL4R, IL5, IL5RA, IL6, IL6R, IL7, IL7R, IL9R, ITGA1, ITGA2, ITGA2B, ITGA3, ITGA4, ITGA5, ITGA6, ITGAM, ITGB3, KIT, KITLG, MME, MS4A1, TFRC, THPO, TNF, TPO 82 ANPEP(3), CD14(1), CD19(1), CD1A(3), CD1B(7), CD1C(6), CD1D(6), CD1E(10), CD2(2), CD22(3), CD33(4), CD34(2), CD36(3), CD38(1), CD3D(1), CD4(1), CD44(1), CD5(4), CD55(2), CD8A(1), CD8B(1), CR1(8), CR2(4), CSF1(1), CSF1R(3), CSF2RA(5), CSF3R(3), DNTT(2), EPO(1), FCER2(1), FCGR1A(1), FLT3(7), FLT3LG(1), GP5(2), HLA-DRA(2), IL1A(2), IL1R2(4), IL2RA(3), IL3(1), IL3RA(4), IL4R(5), IL5RA(1), IL6R(5), IL7R(6), IL9R(2), ITGA1(5), ITGA2(4), ITGA2B(3), ITGA3(1), ITGA4(11), ITGA5(4), ITGA6(3), ITGAM(9), ITGB3(2), KIT(3), MME(2), MS4A1(2), TFRC(5), TPO(9) 15836298 200 76 199 74 36 76 39 28 21 0 0.936 1.000 1.000 322 GPCRDB_OTHER ADORA3, ALG6, C5R1, CCKBR, CCR2, CCR3, CCR5, CELSR1, CELSR2, CELSR3, CHRM2, CHRM3, CIDEB, CXCR3, DRD4, EBI2, EDG1, EDNRA, ELA3A, EMR2, EMR3, F2R, FSHR, FY, GHRHR, GNRHR, GPR, GPR116, GPR132, GPR133, GPR135, GPR143, GPR145, GPR17, GPR18, GPR55, GPR56, GPR61, GPR73L1, GPR77, GPR84, GPR88, GRCA, GRM1, GRPR, HRH4, IL8RA, IL8RB, LGR6, LGR7, LPHN2, LPHN3, LTB4R2, MASS1, NTSR1, OR2A9P, OR2M4, OR5E1P, OR7E19P, OR7E47P, OR7E37P, OR7E18P, OR7E35P, LOC441453, OR8G1, LOC442754, OR8G2, P2RY11, P2RY13, PTGFR, RLN3R1, SMO, SSTR2, TAAR5, TSHR, VN1R1 53 ADORA3(1), CCKBR(8), CCR2(5), CCR3(1), CCR5(1), CELSR1(5), CELSR2(5), CELSR3(13), CHRM2(4), CHRM3(4), CXCR3(1), EMR2(2), EMR3(4), F2R(2), FSHR(11), GHRHR(2), GNRHR(2), GPR116(5), GPR132(1), GPR133(4), GPR135(1), GPR143(1), GPR17(1), GPR18(1), GPR55(6), GPR56(2), GPR61(3), GPR77(1), GPR84(3), GRM1(14), GRPR(5), HRH4(3), LGR6(4), LPHN2(13), LPHN3(19), NTSR1(2), OR2M4(7), OR8G2(2), PTGFR(5), SMO(4), TAAR5(3), TSHR(2) 12968628 183 75 183 66 24 59 51 30 19 0 0.746 1.000 1.000 323 SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES Genes related to PIP3 signaling in cardiac myocytes AKT1, AKT2, AKT3, BAD, BCL2L1, CDC42, CDK2, CDKN1B, CDKN2A, CREB1, CREB3, CREB5, EBP, ERBB4, F2RL2, FOXO3A, FRAP1, GAB1, GADD45A, GRB2, GSK3A, GSK3B, IFI27, IGF1, IGFBP1, INPPL1, IRS1, IRS2, IRS4, MET, MYC, NOLC1, P101-PI3K, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PARD3, PARD6A, PDK1, PIK3CA, PIK3CD, PPP1R13B, PREX1, PSCD3, PTEN, PTK2, PTPN1, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KB1, SFN, SHC1, SLC2A4, SOS1, SOS2, TSC1, TSC2, YWHAB, YWHAE, YWHAG, YWHAH, YWHAQ, YWHAZ 63 AKT2(1), AKT3(2), CDC42(2), CDK2(4), CDKN1B(2), CDKN2A(7), CREB5(4), EBP(1), ERBB4(12), F2RL2(2), GAB1(2), GADD45A(1), GRB2(3), GSK3B(1), IGF1(3), IGFBP1(2), INPPL1(3), IRS1(12), IRS2(2), IRS4(7), MET(10), NOLC1(1), PAK1(5), PAK2(3), PAK3(2), PAK4(1), PAK7(15), PARD3(4), PDK1(2), PIK3CA(5), PPP1R13B(2), PREX1(12), PTEN(3), PTK2(7), PTPN1(1), RPS6KA2(2), RPS6KA3(1), SHC1(2), SOS1(9), SOS2(5), TSC1(7), TSC2(2), YWHAG(1) 15026307 175 75 173 58 41 47 33 28 26 0 0.626 1.000 1.000 324 HSA04620_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY Genes involved in Toll-like receptor signaling pathway AKT1, AKT2, AKT3, CASP8, CCL3, CCL4, CCL5, CD14, CD40, CD80, CD86, CHUK, CXCL10, CXCL11, CXCL9, FADD, FOS, IFNA1, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA2, IFNA21, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, IFNAR1, IFNAR2, IFNB1, IKBKB, IKBKE, IKBKG, IL12A, IL12B, IL1B, IL6, IL8, IRAK1, IRAK4, IRF3, IRF5, IRF7, JUN, LBP, LY96, MAP2K1, MAP2K2, MAP2K3, MAP2K4, MAP2K6, MAP2K7, MAP3K7, MAP3K7IP1, MAP3K7IP2, MAP3K8, MAPK1, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPK8, MAPK9, MYD88, NFKB1, NFKB2, NFKBIA, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, RAC1, RELA, RIPK1, SPP1, STAT1, TBK1, TICAM1, TICAM2, TIRAP, TLR1, TLR2, TLR3, TLR4, TLR5, TLR6, TLR7, TLR8, TLR9, TNF, TOLLIP, TRAF3, TRAF6 98 AKT2(1), AKT3(2), CASP8(3), CCL3(1), CCL4(1), CD14(1), CD86(2), CHUK(1), CXCL9(2), IFNA10(1), IFNA14(3), IFNA16(1), IFNA17(1), IFNA2(3), IFNA21(1), IFNA4(1), IFNA6(2), IFNA7(3), IFNA8(1), IFNAR2(1), IFNB1(3), IKBKB(2), IKBKE(2), IL12A(2), IRAK1(2), IRAK4(2), IRF3(1), IRF7(1), LBP(2), LY96(1), MAP2K1(4), MAP2K3(3), MAP2K4(2), MAP2K7(1), MAP3K7(3), MAP3K8(1), MAPK10(1), MAPK14(1), MAPK3(1), MAPK8(3), MAPK9(5), MYD88(2), NFKB1(2), NFKB2(3), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), RIPK1(3), STAT1(2), TBK1(1), TICAM1(1), TLR1(3), TLR4(23), TLR5(1), TLR6(2), TLR7(6), TLR8(6), TLR9(5), TRAF3(1), TRAF6(3) 17423643 159 73 156 63 22 42 47 26 22 0 0.967 1.000 1.000 325 MRNA_PROCESSING_REACTOME BRUNOL4, C10orf9, C20orf14, CD2BP2, CDC40, CLK2, CLK3, CLK4, COL2A1, CPSF1, CPSF2, CPSF3, CPSF4, CSTF1, CSTF2, CSTF2T, CSTF3, CUGBP1, CUGBP2, DDIT3, DDX1, DDX20, DHX15, DHX16, DHX38, DHX8, DHX9, DICER1, DNAJC8, FLJ10748, FNBP3, FUS, FUSIP1, GIPC1, HEAB, HNRPA2B1, HNRPA3, HNRPA3P1, HNRPA3, LOC387933, HNRPA3P1, HNRPA3, LOC389395, HNRPAB, HNRPC, HNRPC, HNRPCL1, LOC390615, LOC440563, HNRPD, HNRPH1, HNRPH2, HNRPL, HNRPR, HNRPU, HRMT1L2, LSM2, LSM7, METTL3, NCBP1, NCBP2, NONO, NUDT21, NXF1, PABPN1, PAPOLA, PHF5A, POLR2A, PPM1G, PRPF18, PRPF3, PRPF4, PRPF4B, PRPF8, PSKH1, PTBP1, PTBP2, RBM17, RBM5, RNGTT, RNMT, RNPC2, RNPS1, SF3A1, SF3A2, SF3A3, SF3B1, SF3B2, SF3B4, SF3B5, SF4, SFRS10, SFRS12, SFRS14, SFRS16, SFRS2, SFRS4, SFRS5, SFRS6, SFRS7, SFRS8, SFRS9, SMC1L1, SNRP70, SNRPA, SNRPA1, SNRPB, SNRPB2, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF, SNRPG, SNRPN, SNRPN, PAR1, SNRPN, SNURF, SPOP, SRPK1, SRPK2, SRRM1, SUPT5H, TMP21, TXNL4A, U2AF1, U2AF2, WDR57, XRN2 92 CD2BP2(4), CDC40(2), CLK2(5), CLK3(1), CLK4(5), COL2A1(2), CPSF1(5), CPSF2(3), CPSF4(2), CSTF2T(2), CSTF3(1), DDIT3(4), DDX1(2), DDX20(1), DHX15(2), DHX16(4), DHX38(5), DHX8(6), DHX9(2), DICER1(5), DNAJC8(1), FUS(1), GIPC1(1), LOC440563(6), METTL3(1), NCBP2(1), NONO(1), NXF1(5), PABPN1(1), PAPOLA(1), POLR2A(6), PPM1G(4), PRPF18(1), PRPF3(2), PRPF4(3), PRPF4B(3), PRPF8(4), PSKH1(1), PTBP1(2), PTBP2(6), RBM17(1), RBM5(2), RNGTT(2), RNMT(3), SF3A1(3), SF3A3(1), SF3B1(5), SF3B2(3), SF3B4(3), SF3B5(2), SF4(2), SFRS14(4), SFRS16(1), SFRS4(4), SFRS6(4), SFRS8(2), SNRPA(1), SNRPB2(1), SNRPD3(1), SNRPE(1), SNRPN(3), SNURF(1), SRPK1(2), SRRM1(1), SUPT5H(2), TXNL4A(3), U2AF1(4), U2AF2(5), XRN2(3) 20541444 184 72 178 50 55 36 46 24 23 0 0.230 1.000 1.000 326 CALCINEURIN_NF_AT_SIGNALING Mouse genes associated with signal transduction through calcium, calcineurin, and NF-AT. ACTB, BAD, BCL2, CABIN1, CALM1, CALM2, CALM3, CAMK2B, CAMK4, CD3E, CD3G, CD3Z, CD69, CDKN1A, CEBPB, CNR1, CREBBP, CSF2, CSNK2A1, CSNK2B, CTLA4, EGR2, EGR3, EP300, FCER1A, FCGR3A, FKBP1B, FLJ14639, FOS, FOSL1, GAPD, GATA3, GATA4, GRLF1, GSK3A, GSK3B, HRAS, ICOS, IFNA1, IFNB1, IFNG, IL10, IL13, IL1B, IL2, IL2RA, IL3, IL4, IL6, IL8, IL8RA, ITK, JUNB, KPNA5, KPNB3, MAP2K7, MAPK14, MAPK8, MAPK9, MEF2A, MEF2B, MEF2D, MYF5, NCK2, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NFKB2, NFKBIB, NFKBIE, NPPB, NUP214, OPRD1, P2RX7, PAK1, PIN1, PPIA, PPP3CB, PPP3CC, PPP3R1, PTPRC, RELA, RPL13A, SFN, SLA, SP1, SP3, TGFB1, TNF, TNFSF5, TNFSF6, TRAF2, TRPV6, VAV1, VAV2, VAV3, VEGF, XPO5 92 BCL2(1), CABIN1(2), CALM1(1), CAMK4(4), CD69(1), CNR1(3), CREBBP(2), CTLA4(1), EGR2(1), EP300(1), FCER1A(5), FCGR3A(5), FOSL1(2), GATA3(5), GATA4(2), GRLF1(6), GSK3B(1), HRAS(1), IFNB1(3), IFNG(3), IL2(3), IL2RA(3), IL3(1), ITK(4), KPNA5(1), MAP2K7(1), MAPK14(1), MAPK8(3), MAPK9(5), MEF2D(1), MYF5(2), NCK2(3), NFAT5(4), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), NFKB2(3), NFKBIE(1), NUP214(12), P2RX7(2), PAK1(5), PPP3CB(1), PPP3CC(1), PPP3R1(2), PTPRC(10), SLA(1), SP3(1), TGFB1(2), TRPV6(4), VAV1(1), VAV2(2), VAV3(9), XPO5(2) 17657133 156 71 154 58 27 54 36 18 21 0 0.822 1.000 1.000 327 HSA00562_INOSITOL_PHOSPHATE_METABOLISM Genes involved in inositol phosphate metabolism CARKL, FN3K, IMPA1, IMPA2, INPP1, INPP4A, INPP4B, INPP5A, INPP5B, INPP5E, INPPL1, IPMK, ISYNA1, ITGB1BP3, ITPK1, ITPKA, ITPKB, MINPP1, MIOX, OCRL, PI4KA, PI4KB, PIB5PA, PIK3C3, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIP4K2A, PIP4K2B, PIP4K2C, PIP5K1A, PIP5K1B, PIP5K1C, PIP5K3, PLCB1, PLCB2, PLCB3, PLCB4, PLCD1, PLCD3, PLCD4, PLCE1, PLCG1, PLCG2, PLCZ1, PTEN, PTPMT1, SKIP, SYNJ1, SYNJ2 47 IMPA1(1), IMPA2(1), INPP1(1), INPP4A(3), INPP4B(10), INPP5A(3), INPP5B(1), INPPL1(3), IPMK(4), ISYNA1(2), ITGB1BP3(2), ITPK1(1), ITPKA(1), ITPKB(4), OCRL(1), PI4KA(6), PI4KB(3), PIK3C3(4), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIP4K2A(1), PIP4K2B(2), PIP4K2C(3), PIP5K1A(5), PIP5K1B(5), PIP5K1C(2), PLCB1(9), PLCB2(4), PLCB3(3), PLCB4(10), PLCD1(1), PLCD3(1), PLCD4(1), PLCE1(8), PLCG1(4), PLCG2(4), PLCZ1(2), PTEN(3), PTPMT1(1), SYNJ1(3), SYNJ2(1) 14454321 137 67 135 51 21 42 38 18 18 0 0.892 1.000 1.000 328 HSA05120_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION Genes involved in epithelial cell signaling in Helicobacter pylori infection ADAM10, ADAM17, ATP6AP1, ATP6V0A1, ATP6V0A2, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0D1, ATP6V0D2, ATP6V0E1, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1E2, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H, CASP3, CCL5, CDC42, CHUK, CSK, CXCL1, EGFR, F11R, GIT1, HBEGF, IGSF5, IKBKB, IKBKG, IL8, IL8RA, IL8RB, JAM2, JAM3, JUN, LYN, MAP2K4, MAP3K14, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK8, MAPK9, MET, NFKB1, NFKB2, NFKBIA, NOD1, PAK1, PLCG1, PLCG2, PTPN11, PTPRZ1, RAC1, RELA, SRC, TCIRG1, TJP1 65 ADAM10(5), ADAM17(5), ATP6V0A1(1), ATP6V0A4(4), ATP6V0B(1), ATP6V0D1(1), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(2), ATP6V1C1(3), ATP6V1C2(2), ATP6V1D(1), ATP6V1E2(1), ATP6V1G1(1), ATP6V1H(2), CASP3(4), CDC42(2), CHUK(1), CXCL1(2), EGFR(24), F11R(1), IGSF5(2), IKBKB(2), JAM2(5), LYN(3), MAP2K4(2), MAP3K14(1), MAPK10(1), MAPK14(1), MAPK8(3), MAPK9(5), MET(10), NFKB1(2), NFKB2(3), NOD1(1), PAK1(5), PLCG1(4), PLCG2(4), PTPN11(1), PTPRZ1(22), SRC(2), TJP1(4) 13585119 153 67 143 50 32 36 38 24 23 0 0.700 1.000 1.000 329 HSA04150_MTOR_SIGNALING_PATHWAY Genes involved in mTOR signaling pathway AKT1, AKT2, AKT3, BRAF, CAB39, DDIT4, EIF4B, EIF4EBP1, FIGF, FRAP1, GBL, HIF1A, IGF1, INS, KIAA1303, LYK5, MAPK1, MAPK3, PDPK1, PGF, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PRKAA1, PRKAA2, RHEB, RICTOR, RPS6, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA6, RPS6KB1, RPS6KB2, STK11, TSC1, TSC2, ULK1, ULK2, ULK3, VEGFA, VEGFB, VEGFC 44 AKT2(1), AKT3(2), BRAF(13), DDIT4(1), EIF4B(3), FIGF(1), HIF1A(1), IGF1(3), MAPK3(1), PIK3CA(5), PIK3CB(2), PIK3CG(6), PIK3R1(1), PIK3R2(1), PIK3R3(2), PIK3R5(3), PRKAA1(1), RHEB(3), RICTOR(15), RPS6KA2(2), RPS6KA3(1), RPS6KA6(3), RPS6KB2(1), STK11(18), TSC1(7), TSC2(2), ULK1(3), ULK3(1), VEGFA(1), VEGFC(6) 10412751 110 66 104 35 11 30 27 21 21 0 0.680 1.000 1.000 330 INTRINSICPATHWAY The intrinsic prothrombin activation pathway is activated by traumatized blood vessels and induces clot formation. COL4A1, COL4A2, COL4A3, COL4A4, COL4A5, COL4A6, F10, F11, F12, F2, F2R, F5, F8, F9, FGA, FGB, FGG, KLKB1, KNG, PROC, PROS1, SERPINC1, SERPING1 22 COL4A1(7), COL4A2(9), COL4A3(3), COL4A4(8), COL4A5(13), COL4A6(9), F10(1), F11(5), F12(1), F2(5), F2R(2), F5(17), F8(14), F9(8), FGA(2), FGB(10), FGG(2), KLKB1(3), PROC(2), PROS1(10), SERPINC1(5), SERPING1(2) 8716530 138 66 138 48 12 49 31 24 22 0 0.942 1.000 1.000 331 MAPKPATHWAY The mitogen-activated protein (MAP) kinase pathway is a common signaling mechanism and has four main sub-pathways: Erk, JNK/SAPK, p53, and ERK5. ARAF1, ATF2, BRAF, CEBPA, CHUK, CREB1, DAXX, ELK1, FOS, GRB2, HRAS, IKBKB, JUN, MAP2K1, MAP2K2, MAP2K3, MAP2K4, MAP2K5, MAP2K6, MAP2K7, MAP3K1, MAP3K10, MAP3K11, MAP3K12, MAP3K13, MAP3K14, MAP3K2, MAP3K3, MAP3K4, MAP3K5, MAP3K6, MAP3K7, MAP3K8, MAP3K9, MAP4K1, MAP4K2, MAP4K3, MAP4K4, MAP4K5, MAPK1, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPK4, MAPK6, MAPK7, MAPK8, MAPK9, MAPKAPK2, MAPKAPK3, MAPKAPK5, MAX, MEF2A, MEF2B, MEF2C, MEF2D, MKNK1, MKNK2, MYC, NFKB1, NFKBIA, PAK1, PAK2, PDZGEF1, RAC1, RAF1, RELA, RIPK1, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA4, RPS6KA5, RPS6KB1, RPS6KB2, SHC1, SP1, STAT1, TGFB1, TGFB2, TGFB3, TGFBR1, TRADD, TRAF2 84 ATF2(2), BRAF(13), CHUK(1), DAXX(2), GRB2(3), HRAS(1), IKBKB(2), MAP2K1(4), MAP2K3(3), MAP2K4(2), MAP2K7(1), MAP3K1(3), MAP3K10(1), MAP3K11(6), MAP3K12(4), MAP3K13(6), MAP3K14(1), MAP3K2(4), MAP3K3(2), MAP3K4(8), MAP3K5(8), MAP3K6(1), MAP3K7(3), MAP3K8(1), MAP3K9(5), MAP4K1(2), MAP4K3(2), MAP4K5(1), MAPK10(1), MAPK14(1), MAPK3(1), MAPK4(5), MAPK7(4), MAPK8(3), MAPK9(5), MAPKAPK2(2), MAPKAPK3(1), MAPKAPK5(3), MAX(1), MEF2C(1), MEF2D(1), MKNK1(1), NFKB1(2), PAK1(5), PAK2(3), RAF1(2), RIPK1(3), RPS6KA2(2), RPS6KA3(1), RPS6KA4(1), RPS6KA5(2), RPS6KB2(1), SHC1(2), STAT1(2), TGFB1(2), TGFB2(5), TGFB3(1), TGFBR1(2) 18581031 158 64 154 51 40 32 39 24 23 0 0.503 1.000 1.000 332 NO1PATHWAY Shear stress in endothelial cells increases cytoplasmic calcium, which activates nitric oxide synthase III to release NO, which in turn regulates cardiac contractions. ACTA1, AKT1, BDK, BDKRB2, CALM1, CALM2, CALM3, CAV1, CHRM1, CHRNA1, FLT1, FLT4, HSPCA, KDR, NOS3, PDE2A, PDE3A, PDE3B, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKG1, PRKG2, RYR2, SLC7A1, SYT1, TNNI1, VEGF 28 CALM1(1), CHRM1(1), CHRNA1(4), FLT1(12), FLT4(8), KDR(16), NOS3(1), PDE2A(5), PDE3A(5), PDE3B(3), PRKACB(2), PRKACG(1), PRKAR1B(4), PRKG1(1), PRKG2(4), RYR2(89), SLC7A1(2), SYT1(3), TNNI1(2) 8006772 164 64 160 48 22 57 37 26 20 2 0.532 1.000 1.000 333 PEPTIDE_GPCRS AGTR1, AGTR2, ATP8A1, AVPR1A, AVPR1B, AVPR2, BDKRB1, BDKRB2, BLR1, BRS3, C3AR1, C5R1, CCKAR, CCKBR, CCR1, CCR10, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CX3CR1, CXCR3, CXCR4, CXCR6, EDNRA, EDNRB, ELA3A, FPR1, FPRL1, FPRL2, FSHR, FY, GALR1, GALR2, GALR3, GALT, GHSR, GNB2L1, GNRHR, GPR77, GRPR, IL8RA, IL8RB, LHCGR, MC1R, MC2R, MC3R, MC4R, MC5R, NMBR, NPY1R, NPY2R, NPY5R, NPY6R, NTSR1, NTSR2, OPRD1, OPRK1, OPRL1, OPRM1, OXTR, PPYR1, SSTR1, SSTR2, SSTR3, SSTR4, TAC4, TACR1, TACR2, TACR3, TRHR, TSHR 66 AGTR1(1), AGTR2(2), ATP8A1(2), AVPR1A(4), AVPR1B(1), AVPR2(3), BRS3(6), C3AR1(2), CCKAR(4), CCKBR(8), CCR1(1), CCR2(5), CCR3(1), CCR4(1), CCR5(1), CCR6(1), CCR8(5), CX3CR1(5), CXCR3(1), CXCR4(3), CXCR6(1), EDNRB(2), FPR1(1), FSHR(11), GALR1(2), GALR2(1), GALT(1), GHSR(2), GNB2L1(1), GNRHR(2), GPR77(1), GRPR(5), LHCGR(3), MC2R(1), MC3R(5), MC5R(5), NMBR(3), NPY1R(6), NPY2R(6), NPY5R(5), NTSR1(2), OPRK1(2), OPRL1(3), OPRM1(1), OXTR(1), PPYR1(1), SSTR1(2), SSTR3(2), SSTR4(4), TACR1(1), TACR3(2), TSHR(2) 10110762 144 64 143 53 17 53 41 20 13 0 0.614 1.000 1.000 334 NFATPATHWAY Cardiac hypertrophy is induced by NF-ATc4 and GATA4, which are stimulated through calcineurin activated by CaMK. ACTA1, AGT, AKT1, CALM1, CALM2, CALM3, CALR, CAMK1, CAMK1G, CAMK4, CREBBP, CSNK1A1, CTF1, DTR, EDN1, ELSPBP1, F2, FGF2, FKBP1A, GATA4, GSK3B, HAND1, HAND2, HRAS, IGF1, LIF, MAP2K1, MAPK1, MAPK14, MAPK3, MAPK8, MEF2C, MYH2, NFATC1, NFATC2, NFATC3, NFATC4, NKX2-5, NPPA, PIK3CA, PIK3R1, PPP3CA, PPP3CB, PPP3CC, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, RAF1, RPS6KB1, SYT1 51 CALM1(1), CALR(1), CAMK1(2), CAMK4(4), CREBBP(2), CSNK1A1(1), ELSPBP1(2), F2(5), GATA4(2), GSK3B(1), HAND1(1), HAND2(2), HRAS(1), IGF1(3), LIF(2), MAP2K1(4), MAPK14(1), MAPK3(1), MAPK8(3), MEF2C(1), MYH2(20), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), NKX2-5(2), NPPA(1), PIK3CA(5), PIK3R1(1), PPP3CA(2), PPP3CB(1), PPP3CC(1), PRKACB(2), PRKACG(1), PRKAR1B(4), RAF1(2), SYT1(3) 9826704 100 63 99 35 18 36 27 8 11 0 0.706 1.000 1.000 335 HSA05130_PATHOGENIC_ESCHERICHIA_COLI_INFECTION_EHEC Genes involved in pathogenic Escherichia coli infection - EHEC ABL1, ACTB, ACTG1, ARHGEF2, ARPC5, ARPC5L, CD14, CDC42, CDH1, CLDN1, CTNNB1, CTTN, EZR, FYN, HCLS1, ITGB1, KRT18, LOC643224, LOC654264, LY96, NCK1, NCK2, NCL, OCLN, PRKCA, RHOA, ROCK1, ROCK2, TLR4, TLR5, TUBA1A, TUBA1B, TUBA1C, TUBA3C, TUBA3D, TUBA3E, TUBA4A, TUBA8, TUBAL3, TUBB, TUBB1, TUBB2A, TUBB2B, TUBB2C, TUBB3, TUBB4, TUBB4Q, TUBB6, TUBB8, WAS, WASL, YWHAQ, YWHAZ 51 ABL1(1), ACTG1(2), ARHGEF2(4), ARPC5(1), CD14(1), CDC42(2), CDH1(4), CLDN1(3), CTNNB1(9), CTTN(2), FYN(2), HCLS1(5), ITGB1(2), KRT18(1), LY96(1), NCK1(1), NCK2(3), NCL(4), PRKCA(7), RHOA(1), ROCK1(7), ROCK2(3), TLR4(23), TLR5(1), TUBA1A(2), TUBA1B(1), TUBA1C(2), TUBA3C(6), TUBA3D(6), TUBA3E(1), TUBA4A(2), TUBB1(2), TUBB2B(1), TUBB2C(3), TUBB4(3), TUBB4Q(5), TUBB8(3), WAS(2), WASL(4) 10159911 133 62 132 57 29 47 27 20 10 0 0.986 1.000 1.000 336 HSA05131_PATHOGENIC_ESCHERICHIA_COLI_INFECTION_EPEC Genes involved in pathogenic Escherichia coli infection - EPEC ABL1, ACTB, ACTG1, ARHGEF2, ARPC5, ARPC5L, CD14, CDC42, CDH1, CLDN1, CTNNB1, CTTN, EZR, FYN, HCLS1, ITGB1, KRT18, LOC643224, LOC654264, LY96, NCK1, NCK2, NCL, OCLN, PRKCA, RHOA, ROCK1, ROCK2, TLR4, TLR5, TUBA1A, TUBA1B, TUBA1C, TUBA3C, TUBA3D, TUBA3E, TUBA4A, TUBA8, TUBAL3, TUBB, TUBB1, TUBB2A, TUBB2B, TUBB2C, TUBB3, TUBB4, TUBB4Q, TUBB6, TUBB8, WAS, WASL, YWHAQ, YWHAZ 51 ABL1(1), ACTG1(2), ARHGEF2(4), ARPC5(1), CD14(1), CDC42(2), CDH1(4), CLDN1(3), CTNNB1(9), CTTN(2), FYN(2), HCLS1(5), ITGB1(2), KRT18(1), LY96(1), NCK1(1), NCK2(3), NCL(4), PRKCA(7), RHOA(1), ROCK1(7), ROCK2(3), TLR4(23), TLR5(1), TUBA1A(2), TUBA1B(1), TUBA1C(2), TUBA3C(6), TUBA3D(6), TUBA3E(1), TUBA4A(2), TUBB1(2), TUBB2B(1), TUBB2C(3), TUBB4(3), TUBB4Q(5), TUBB8(3), WAS(2), WASL(4) 10159911 133 62 132 57 29 47 27 20 10 0 0.986 1.000 1.000 337 SIG_CHEMOTAXIS Genes related to chemotaxis ACTR2, ACTR3, AKT1, AKT2, AKT3, ANGPTL2, ARHGAP1, ARHGAP4, ARHGEF11, BTK, CDC42, CFL1, CFL2, GDI1, GDI2, INPPL1, ITPR1, ITPR2, ITPR3, LIMK1, MYLK, MYLK2, P101-PI3K, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PDK1, PIK3CA, PIK3CD, PIK3CG, PIK3R1, PITX2, PPP1R13B, PTEN, RACGAP1, RHO, ROCK1, ROCK2, RPS4X, SAG, WASF1, WASL 44 ACTR2(1), ACTR3(1), AKT2(1), AKT3(2), ANGPTL2(2), ARHGAP1(1), ARHGAP4(2), ARHGEF11(6), BTK(7), CDC42(2), CFL2(1), GDI1(3), GDI2(1), INPPL1(3), ITPR1(7), ITPR2(15), ITPR3(4), MYLK(10), MYLK2(2), PAK1(5), PAK2(3), PAK3(2), PAK4(1), PAK7(15), PDK1(2), PIK3CA(5), PIK3CG(6), PIK3R1(1), PITX2(3), PPP1R13B(2), PTEN(3), RACGAP1(2), ROCK1(7), ROCK2(3), SAG(2), WASF1(4), WASL(4) 13670388 141 61 137 42 33 38 36 15 19 0 0.457 1.000 1.000 338 HSA00150_ANDROGEN_AND_ESTROGEN_METABOLISM Genes involved in androgen and estrogen metabolism AKR1C4, AKR1D1, ARSD, ARSE, CARM1, CYP11B1, CYP11B2, CYP19A1, HEMK1, HSD11B1, HSD11B2, HSD17B1, HSD17B12, HSD17B2, HSD17B3, HSD17B7, HSD17B8, HSD3B1, HSD3B2, LCMT1, LCMT2, METTL2B, METTL6, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, SRD5A1, SRD5A2, STS, SULT1E1, SULT2A1, SULT2B1, UGT1A1, UGT1A10, UGT1A3, UGT1A4, UGT1A5, UGT1A6, UGT1A7, UGT1A8, UGT1A9, UGT2A1, UGT2A3, UGT2B10, UGT2B11, UGT2B15, UGT2B17, UGT2B28, UGT2B4, UGT2B7, WBSCR22 54 AKR1C4(1), AKR1D1(2), ARSD(2), CARM1(3), CYP11B1(3), CYP11B2(6), CYP19A1(2), HSD11B1(2), HSD11B2(1), HSD17B12(1), HSD17B2(1), HSD3B1(7), HSD3B2(12), LCMT1(1), LCMT2(4), METTL2B(3), METTL6(1), PRMT2(1), PRMT3(1), PRMT5(1), PRMT6(2), PRMT7(3), PRMT8(5), SRD5A1(3), STS(3), SULT2A1(1), SULT2B1(1), UGT1A1(3), UGT1A10(3), UGT1A3(3), UGT1A4(1), UGT1A5(1), UGT1A6(2), UGT1A7(2), UGT1A9(4), UGT2A1(3), UGT2A3(4), UGT2B10(11), UGT2B11(9), UGT2B15(4), UGT2B28(6), UGT2B4(6), UGT2B7(5), WBSCR22(1) 9808902 141 60 139 45 17 53 38 21 12 0 0.666 1.000 1.000 339 HSA00350_TYROSINE_METABOLISM Genes involved in tyrosine metabolism ABP1, ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, ALDH1A3, ALDH3A1, ALDH3B1, ALDH3B2, AOC2, AOC3, AOX1, ARD1A, CARM1, COMT, DBH, DCT, DDC, ECH1, ESCO1, ESCO2, FAH, GOT1, GOT2, GSTZ1, HEMK1, HGD, HPD, LCMT1, LCMT2, LYCAT, MAOA, MAOB, METTL2B, METTL6, MIF, MYST3, MYST4, NAT5, NAT6, PNMT, PNPLA3, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, SH3GLB1, TAT, TH, TPO, TYR, TYRP1, WBSCR22 56 ABP1(4), ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH5(3), ADH6(4), ADH7(3), ADHFE1(2), ALDH1A3(1), ALDH3A1(1), ALDH3B2(3), AOC2(3), AOC3(2), AOX1(6), CARM1(3), DCT(4), DDC(6), ESCO1(5), ESCO2(2), FAH(1), GOT1(2), GOT2(3), HGD(3), HPD(2), LCMT1(1), LCMT2(4), METTL2B(3), METTL6(1), MYST3(7), MYST4(6), PNPLA3(1), PRMT2(1), PRMT3(1), PRMT5(1), PRMT6(2), PRMT7(3), PRMT8(5), SH3GLB1(1), TAT(2), TH(1), TPO(9), TYR(6), TYRP1(2), WBSCR22(1) 11557110 138 60 137 49 24 53 31 11 19 0 0.799 1.000 1.000 340 HSA00980_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 Genes involved in metabolism of xenobiotics by cytochrome P450 ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, AKR1C1, AKR1C2, AKR1C3, AKR1C4, ALDH1A3, ALDH3A1, ALDH3B1, ALDH3B2, CYP1A1, CYP1A2, CYP1B1, CYP2B6, CYP2C18, CYP2C19, CYP2C8, CYP2C9, CYP2E1, CYP2F1, CYP2S1, CYP3A4, CYP3A43, CYP3A5, CYP3A7, DHDH, EPHX1, GSTA1, GSTA2, GSTA3, GSTA4, GSTA5, GSTK1, GSTM1, GSTM2, GSTM3, GSTM4, GSTM5, GSTO2, GSTP1, GSTT1, GSTT2, GSTZ1, MGST1, MGST2, MGST3, UGT1A1, UGT1A10, UGT1A3, UGT1A4, UGT1A5, UGT1A6, UGT1A7, UGT1A8, UGT1A9, UGT2A1, UGT2A3, UGT2B10, UGT2B11, UGT2B15, UGT2B17, UGT2B28, UGT2B4, UGT2B7 68 ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH5(3), ADH6(4), ADH7(3), ADHFE1(2), AKR1C1(2), AKR1C2(2), AKR1C3(1), AKR1C4(1), ALDH1A3(1), ALDH3A1(1), ALDH3B2(3), CYP1A1(3), CYP1A2(1), CYP1B1(2), CYP2B6(5), CYP2C18(2), CYP2C19(5), CYP2C8(2), CYP2C9(2), CYP2E1(3), CYP2F1(2), CYP2S1(1), CYP3A4(1), CYP3A43(1), CYP3A7(3), DHDH(1), EPHX1(1), GSTA1(1), GSTA2(2), GSTA3(2), GSTA5(3), GSTK1(4), GSTM2(1), GSTM3(1), GSTM4(1), GSTM5(2), GSTO2(1), GSTP1(2), MGST1(1), MGST3(2), UGT1A1(3), UGT1A10(3), UGT1A3(3), UGT1A4(1), UGT1A5(1), UGT1A6(2), UGT1A7(2), UGT1A9(4), UGT2A1(3), UGT2A3(4), UGT2B10(11), UGT2B11(9), UGT2B15(4), UGT2B28(6), UGT2B4(6), UGT2B7(5) 11128185 165 60 164 64 21 68 39 19 18 0 0.958 1.000 1.000 341 SIG_BCR_SIGNALING_PATHWAY Members of the BCR signaling pathway AKT1, AKT2, AKT3, BAD, BCL2, BCR, BLNK, BTK, CD19, CD22, CD81, CR2, CSK, DAG1, FLOT1, FLOT2, GRB2, GSK3A, GSK3B, INPP5D, ITPR1, ITPR2, ITPR3, LYN, MAP4K1, MAPK1, MAPK3, NFATC1, NFATC2, NR0B2, PDK1, PIK3CA, PIK3CD, PIK3R1, PLCG2, PPP1R13B, PPP3CA, PPP3CB, PPP3CC, PTPRC, RAF1, SHC1, SOS1, SOS2, SYK, VAV1 46 AKT2(1), AKT3(2), BCL2(1), BCR(3), BTK(7), CD19(1), CD22(3), CR2(4), DAG1(2), FLOT1(2), GRB2(3), GSK3B(1), INPP5D(3), ITPR1(7), ITPR2(15), ITPR3(4), LYN(3), MAP4K1(2), MAPK3(1), NFATC1(1), NFATC2(5), PDK1(2), PIK3CA(5), PIK3R1(1), PLCG2(4), PPP1R13B(2), PPP3CA(2), PPP3CB(1), PPP3CC(1), PTPRC(10), RAF1(2), SHC1(2), SOS1(9), SOS2(5), SYK(1), VAV1(1) 14394594 119 60 117 41 20 34 33 14 18 0 0.679 1.000 1.000 342 HSA00010_GLYCOLYSIS_AND_GLUCONEOGENESIS Genes involved in glycolysis and gluconeogenesis ACSS1, ACSS2, ACYP1, ACYP2, ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, AKR1A1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH3B1, ALDH3B2, ALDH7A1, ALDH9A1, ALDOA, ALDOB, ALDOC, BPGM, DLAT, DLD, ENO1, ENO2, ENO3, FBP1, FBP2, G6PC, G6PC2, GALM, GAPDH, GAPDHS, GCK, GPI, HK1, HK2, HK3, LDHA, LDHAL6A, LDHAL6B, LDHB, LDHC, PDHA1, PDHA2, PDHB, PFKL, PFKM, PFKP, PGAM1, PGAM2, PGAM4, PGK1, PGK2, PGM1, PGM3, PKLR, PKM2, TPI1 64 ACSS1(1), ACSS2(3), ACYP2(1), ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH5(3), ADH6(4), ADH7(3), ADHFE1(2), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH3B2(3), ALDH7A1(1), ALDH9A1(2), ALDOA(1), ALDOB(2), ALDOC(1), DLAT(3), DLD(3), ENO1(1), ENO3(1), G6PC(1), G6PC2(1), GAPDH(2), GAPDHS(4), GCK(1), GPI(3), HK1(3), HK2(5), HK3(5), LDHA(3), LDHAL6A(3), LDHC(4), PDHA1(1), PDHA2(8), PFKL(1), PFKM(2), PFKP(3), PGAM2(1), PGAM4(1), PGK1(4), PGK2(11), PGM1(2), PGM3(2), PKLR(4), PKM2(2), TPI1(3) 11304915 143 59 142 53 31 60 26 15 11 0 0.845 1.000 1.000 343 HSA00240_PYRIMIDINE_METABOLISM Genes involved in pyrimidine metabolism AICDA, AK3, CAD, CANT1, CDA, CMPK, CTPS, CTPS2, DCK, DCTD, DHODH, DPYD, DPYS, DTYMK, DUT, ECGF1, ENTPD1, ENTPD3, ENTPD4, ENTPD5, ENTPD6, ENTPD8, ITPA, NME1, NME2, NME4, NME6, NME7, NP, NT5C, NT5C1A, NT5C1B, NT5C2, NT5C3, NT5E, NT5M, NUDT2, PNPT1, POLA1, POLA2, POLD1, POLD2, POLD3, POLD4, POLE, POLE2, POLE3, POLE4, POLR1A, POLR1B, POLR1C, POLR1D, POLR2A, POLR2B, POLR2C, POLR2D, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR2L, POLR3A, POLR3B, POLR3G, POLR3GL, POLR3H, POLR3K, PRIM1, PRIM2, RFC5, RRM1, RRM2, RRM2B, TK1, TK2, TXNRD1, TXNRD2, TYMS, UCK1, UCK2, UMPS, UPB1, UPP1, UPP2, UPRT, ZNRD1 86 CAD(9), CANT1(1), CTPS(4), CTPS2(1), DCK(1), DCTD(1), DHODH(1), DPYD(10), DPYS(6), DTYMK(2), ENTPD1(4), ENTPD4(1), ENTPD6(1), NME7(3), NT5C1A(2), NT5C1B(1), NT5C3(1), NT5E(1), NT5M(1), NUDT2(2), PNPT1(2), POLA1(1), POLD1(1), POLD3(2), POLE(12), POLR1A(5), POLR1B(8), POLR1D(1), POLR2A(6), POLR2B(1), POLR2C(2), POLR2D(2), POLR2E(1), POLR2G(2), POLR2H(2), POLR2L(1), POLR3A(7), POLR3B(10), POLR3H(1), PRIM1(2), PRIM2(7), RRM1(5), RRM2(4), TXNRD1(1), TXNRD2(1), UCK2(2), UMPS(2), UPP1(6), UPP2(4), UPRT(2) 15815916 156 59 155 50 38 49 35 15 18 1 0.546 1.000 1.000 344 HSA00561_GLYCEROLIPID_METABOLISM Genes involved in glycerolipid metabolism ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, AGK, AGPAT1, AGPAT2, AGPAT3, AGPAT4, AGPAT6, AKR1A1, AKR1B1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, CEL, DAK, DGAT1, DGAT2, DGKA, DGKB, DGKD, DGKE, DGKG, DGKH, DGKI, DGKQ, DGKZ, GK, GK2, GLA, GLB1, GPAM, LCT, LIPA, LIPC, LIPF, LIPG, LPL, LYCAT, MGLL, PNLIP, PNLIPRP1, PNLIPRP2, PNPLA3, PPAP2A, PPAP2B, PPAP2C, UGCGL1, UGCGL2 55 ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH5(3), ADH6(4), ADH7(3), ADHFE1(2), AGK(1), AGPAT1(1), AGPAT2(3), AGPAT3(2), AGPAT4(1), AGPAT6(1), AKR1B1(1), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2), CEL(3), DAK(1), DGAT1(1), DGKA(2), DGKB(8), DGKD(2), DGKE(3), DGKG(4), DGKI(12), DGKZ(3), GK(2), GK2(4), GLA(2), GPAM(1), LCT(12), LIPA(1), LIPC(5), LIPF(2), LIPG(2), LPL(2), MGLL(1), PNLIP(4), PNLIPRP1(5), PNLIPRP2(4), PNPLA3(1), PPAP2B(1) 11473776 141 59 141 39 18 56 31 16 19 1 0.365 1.000 1.000 345 HSA03320_PPAR_SIGNALING_PATHWAY Genes involved in PPAR signaling pathway ACAA1, ACADL, ACADM, ACOX1, ACOX2, ACOX3, ACSL1, ACSL3, ACSL4, ACSL5, ACSL6, ADIPOQ, ANGPTL4, APOA1, APOA2, APOA5, APOC3, AQP7, CD36, CPT1A, CPT1B, CPT1C, CPT2, CYP27A1, CYP4A11, CYP4A22, CYP7A1, CYP8B1, DBI, EHHADH, FABP1, FABP2, FABP3, FABP4, FABP5, FABP5L1, FABP6, FABP7, FADS2, GK, GK2, HMGCS2, ILK, LOC642956, LPL, ME1, MMP1, NR1H3, OLR1, PCK1, PCK2, PDPK1, PLIN, PLTP, PPARA, PPARD, PPARG, RXRA, RXRB, RXRG, SCD, SCP2, SLC27A1, SLC27A2, SLC27A4, SLC27A5, SLC27A6, SORBS1, UBC, UCP1 67 ACADM(3), ACOX1(2), ACOX2(2), ACOX3(4), ACSL1(4), ACSL3(1), ACSL4(1), ACSL5(1), ACSL6(6), ADIPOQ(2), APOA1(1), APOA5(2), APOC3(2), CD36(3), CPT1A(5), CPT1B(3), CPT1C(2), CPT2(2), CYP27A1(3), CYP4A11(3), CYP7A1(4), CYP8B1(2), EHHADH(3), FABP1(1), FABP2(1), FABP3(2), GK(2), GK2(4), HMGCS2(5), LPL(2), ME1(1), MMP1(3), NR1H3(2), OLR1(2), PCK1(8), PCK2(1), PLTP(2), PPARD(1), PPARG(2), RXRG(6), SCP2(3), SLC27A1(1), SLC27A2(3), SLC27A4(1), SLC27A5(1), SLC27A6(4), SORBS1(4), UBC(7), UCP1(1) 12709983 131 59 131 39 30 47 27 14 13 0 0.370 1.000 1.000 346 SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES Genes related to regulation of the actin cytoskeleton ACTG1, ACTG2, ACTR2, ACTR3, AKT1, ANGPTL2, CDC42, CFL1, CFL2, FLNA, FLNC, FSCN1, FSCN2, FSCN3, GDI1, GDI2, LIMK1, MYH2, MYLK, MYLK2, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PFN1, PFN2, RHO, ROCK1, ROCK2, RPS4X, VASP, WASF1, WASL 35 ACTG1(2), ACTG2(3), ACTR2(1), ACTR3(1), ANGPTL2(2), CDC42(2), CFL2(1), FLNA(7), FLNC(9), FSCN1(1), FSCN3(4), GDI1(3), GDI2(1), MYH2(20), MYLK(10), MYLK2(2), PAK1(5), PAK2(3), PAK3(2), PAK4(1), PAK7(15), PFN2(3), ROCK1(7), ROCK2(3), WASF1(4), WASL(4) 9297933 116 58 115 38 22 38 26 12 18 0 0.707 1.000 1.000 347 HSA04340_HEDGEHOG_SIGNALING_PATHWAY Genes involved in Hedgehog signaling pathway BMP2, BMP4, BMP5, BMP6, BMP7, BMP8A, BMP8B, BTRC, CSNK1A1, CSNK1A1L, CSNK1D, CSNK1E, CSNK1G1, CSNK1G2, CSNK1G3, DHH, FBXW11, GAS1, GLI1, GLI2, GLI3, GSK3B, HHIP, IHH, LRP2, PRKACA, PRKACB, PRKACG, PRKX, PRKY, PTCH1, PTCH2, RAB23, SHH, SMO, STK36, SUFU, WNT1, WNT10A, WNT10B, WNT11, WNT16, WNT2, WNT2B, WNT3, WNT3A, WNT4, WNT5A, WNT5B, WNT6, WNT7A, WNT7B, WNT8A, WNT8B, WNT9A, WNT9B, ZIC2 56 BMP2(1), BMP4(2), BMP5(3), BMP6(2), BMP7(3), BMP8A(1), BTRC(5), CSNK1A1(1), CSNK1A1L(3), CSNK1D(1), CSNK1E(2), CSNK1G1(1), CSNK1G3(1), DHH(1), GLI1(6), GLI2(4), GLI3(6), GSK3B(1), IHH(1), LRP2(26), PRKACB(2), PRKACG(1), PRKX(3), PTCH1(8), PTCH2(1), SHH(3), SMO(4), STK36(5), WNT1(3), WNT10A(2), WNT10B(2), WNT11(1), WNT16(2), WNT2(2), WNT3A(2), WNT4(1), WNT5A(1), WNT5B(1), WNT6(1), WNT7A(4), WNT7B(2), WNT8A(1), WNT8B(1), WNT9A(2), WNT9B(2), ZIC2(4) 11853552 132 56 130 43 32 37 34 18 10 1 0.602 1.000 1.000 348 KERATINOCYTEPATHWAY Keratinocyte differentiation, which models the differentiation of epidermal cells, requires the four main MAP kinase pathways. BCL2, CEBPA, CHUK, DAXX, EGF, EGFR, ETS1, ETS2, FOS, HOXA7, HRAS, IKBKB, JUN, MAP2K1, MAP2K3, MAP2K4, MAP2K6, MAP2K7, MAP3K1, MAP3K14, MAP3K5, MAPK1, MAPK13, MAPK14, MAPK3, MAPK8, NFKB1, NFKBIA, PPP2CA, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCG, PRKCH, PRKCQ, RAF1, RELA, RIPK1, SP1, TNF, TNFRSF1A, TNFRSF1B, TNFRSF6, TNFSF6, TRAF2 42 BCL2(1), CHUK(1), DAXX(2), EGF(7), EGFR(24), ETS1(1), ETS2(1), HOXA7(2), HRAS(1), IKBKB(2), MAP2K1(4), MAP2K3(3), MAP2K4(2), MAP2K7(1), MAP3K1(3), MAP3K14(1), MAP3K5(8), MAPK14(1), MAPK3(1), MAPK8(3), NFKB1(2), PRKCA(7), PRKCD(1), PRKCE(1), PRKCG(5), PRKCH(2), PRKCQ(3), RAF1(2), RIPK1(3), TNFRSF1B(1) 9507945 96 56 86 36 18 22 22 18 16 0 0.880 1.000 1.000 349 ST_T_CELL_SIGNAL_TRANSDUCTION On activation of the T cell receptor, phospholipase C is activated to produce second messengers DAG and PIP3, both required for T cell activation. CBL, CD28, CD3D, CSK, CTLA4, DAG1, DTYMK, EPHB2, FBXW7, GRAP2, GRB2, ITK, ITPKA, ITPKB, LAT, LCK, LCP2, MAPK1, NCK1, NFAT5, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, PAG, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PLCG1, PTPRC, RAF1, RASGRP1, RASGRP2, RASGRP3, RASGRP4, SOS1, SOS2, VAV1, ZAP70 44 CBL(7), CD28(1), CD3D(1), CTLA4(1), DAG1(2), DTYMK(2), EPHB2(4), FBXW7(2), GRAP2(3), GRB2(3), ITK(4), ITPKA(1), ITPKB(4), LAT(3), LCK(5), LCP2(3), NCK1(1), NFAT5(4), NFKB1(2), NFKB2(3), NFKBIE(1), PAK1(5), PAK2(3), PAK3(2), PAK4(1), PAK7(15), PLCG1(4), PTPRC(10), RAF1(2), RASGRP2(1), RASGRP3(5), RASGRP4(2), SOS1(9), SOS2(5), VAV1(1), ZAP70(2) 10894566 124 56 124 31 25 40 29 11 19 0 0.169 1.000 1.000 350 STARCH_AND_SUCROSE_METABOLISM AGL, AMY1A, AMY1B, AMY1C, AMY2A, AMY2B, AMY2B, RNPC3, ENPP1, ENPP3, G6PC, GAA, GANAB, GBA3, GBE1, GCK, GPI, GUSB, GYS1, GYS2, HK1, HK2, HK3, MGAM, PGM1, PGM3, PYGB, PYGL, PYGM, SI, UCHL1, UCHL3, UGDH, UGT1A10, UGT1A10, UGT1A8, UGT1A7, UGT1A6, UGT1A5, UGT1A9, UGT1A4, UGT1A1, UGT1A3, UGT1A6, UGT1A8, UGT1A9, UGT2B15, UGT2B4, UXS1 41 AGL(11), AMY2A(4), AMY2B(15), ENPP1(3), ENPP3(5), G6PC(1), GAA(1), GANAB(3), GBA3(7), GBE1(1), GCK(1), GPI(3), GUSB(2), GYS1(1), GYS2(1), HK1(3), HK2(5), HK3(5), MGAM(15), PGM1(2), PGM3(2), PYGB(1), PYGM(3), SI(31), UGDH(3), UGT1A1(3), UGT1A10(3), UGT1A3(3), UGT1A4(1), UGT1A5(1), UGT1A6(2), UGT1A7(2), UGT1A9(4), UGT2B15(4), UGT2B4(6), UXS1(4) 11162241 162 56 160 58 31 63 39 13 16 0 0.918 1.000 1.000 351 HSA00380_TRYPTOPHAN_METABOLISM Genes involved in tryptophan metabolism AADAT, AANAT, ABP1, ACAT1, ACAT2, ACMSD, AFMID, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, AOC2, AOC3, AOX1, ASMT, CARM1, CAT, CYP1A1, CYP1A2, CYP1B1, DDC, ECHS1, EHHADH, GCDH, HAAO, HADH, HADHA, HEMK1, HSD17B10, HSD17B4, INDO, INDOL1, INMT, KMO, KYNU, LCMT1, LCMT2, LNX1, MAOA, MAOB, METTL2B, METTL6, NFX1, OGDH, OGDHL, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, TDO2, TPH1, TPH2, WARS, WARS2, WBSCR22 58 ABP1(4), ACAT1(1), ACMSD(2), AFMID(1), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2), AOC2(3), AOC3(2), AOX1(6), ASMT(4), CARM1(3), CAT(3), CYP1A1(3), CYP1A2(1), CYP1B1(2), DDC(6), EHHADH(3), GCDH(1), HADH(2), HADHA(2), INMT(4), KMO(3), KYNU(2), LCMT1(1), LCMT2(4), LNX1(2), METTL2B(3), METTL6(1), NFX1(1), OGDHL(5), PRMT2(1), PRMT3(1), PRMT5(1), PRMT6(2), PRMT7(3), PRMT8(5), TDO2(2), TPH1(10), TPH2(4), WARS(2), WARS2(8), WBSCR22(1) 11759898 129 55 127 38 16 37 41 15 19 1 0.311 1.000 1.000 352 HSA00790_FOLATE_BIOSYNTHESIS Genes involved in folate biosynthesis ALPI, ALPL, ALPP, ALPPL2, ASCC3, ASCC3L1, ATP13A2, DDX18, DDX19A, DDX23, DDX4, DDX41, DDX47, DDX50, DDX51, DDX52, DDX54, DDX55, DDX56, DHFR, DHX58, ENTPD7, EP400, ERCC2, ERCC3, FPGS, GCH1, GGH, IFIH1, MOV10L1, NUDT5, NUDT8, PTS, QDPR, RAD54B, RAD54L, RUVBL2, SETX, SKIV2L2, SMARCA2, SMARCA5, SPR 41 ALPI(2), ALPL(2), ALPP(3), ALPPL2(2), ASCC3(8), ATP13A2(4), DDX18(1), DDX19A(1), DDX23(5), DDX4(2), DDX41(1), DDX47(1), DDX50(4), DDX52(2), DDX54(1), DDX55(1), DDX56(1), ENTPD7(1), EP400(4), ERCC2(2), ERCC3(4), FPGS(1), GCH1(3), GGH(1), IFIH1(4), MOV10L1(5), NUDT5(1), NUDT8(1), QDPR(2), RAD54B(6), RUVBL2(1), SETX(11), SKIV2L2(9), SMARCA2(6), SMARCA5(1) 12239004 104 55 104 37 19 27 28 12 17 1 0.745 1.000 1.000 353 HSA04742_TASTE_TRANSDUCTION Genes involved in taste transduction ACCN1, ADCY4, ADCY6, ADCY8, CACNA1A, CACNA1B, GNAS, GNAT3, GNB1, GNB3, GNG13, GNG3, GRM4, ITPR3, KCNB1, PDE1A, PLCB2, PRKACA, PRKACB, PRKACG, PRKX, PRKY, SCNN1A, SCNN1B, SCNN1G, TAS1R1, TAS1R2, TAS1R3, TAS2R1, TAS2R10, TAS2R13, TAS2R14, TAS2R16, TAS2R3, TAS2R38, TAS2R39, TAS2R4, TAS2R40, TAS2R41, TAS2R42, TAS2R43, TAS2R44, TAS2R45, TAS2R46, TAS2R48, TAS2R49, TAS2R5, TAS2R50, TAS2R60, TAS2R7, TAS2R8, TAS2R9, TRPM5 48 ACCN1(3), ADCY4(5), ADCY6(5), ADCY8(13), CACNA1A(6), CACNA1B(9), GNAS(3), GNB1(1), GNB3(2), GNG3(2), GRM4(3), ITPR3(4), KCNB1(8), PDE1A(5), PLCB2(4), PRKACB(2), PRKACG(1), PRKX(3), SCNN1B(1), SCNN1G(2), TAS1R1(2), TAS1R2(5), TAS1R3(2), TAS2R1(4), TAS2R10(1), TAS2R13(1), TAS2R14(1), TAS2R16(1), TAS2R3(2), TAS2R38(2), TAS2R39(3), TAS2R40(1), TAS2R41(1), TAS2R46(2), TAS2R5(1), TAS2R50(2), TAS2R60(6), TAS2R9(1), TRPM5(1) 11152953 121 55 120 42 18 49 28 13 13 0 0.662 1.000 1.000 354 TRYPTOPHAN_METABOLISM AANAT, ABP1, ACAT1, ACAT2, ACMSD, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, AOC2, AOC3, AOX1, ASMT, CAT, CYP19A1, CYP1A1, CYP1A2, CYP2A6, CYP2A6, CYP2A7, CYP2A7P1, CYP2A13, CYP2B6, CYP2C18, CYP2C19, CYP2C19, CYP2C9, CYP2C8, CYP2C9, CYP2D6, CYP2E1, CYP2F1, CYP2J2, CYP3A4, CYP3A5, CYP3A7, CYP4B1, CYP4F8, CYP51A1, DDC, ECHS1, EHHADH, GCDH, HAAO, HADHA, INDO, KMO, KYNU, MAOA, MAOB, SDS, TDO2, TPH1, WARS, WARS2 54 ABP1(4), ACAT1(1), ACMSD(2), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH9A1(2), AOC2(3), AOC3(2), AOX1(6), ASMT(4), CAT(3), CYP19A1(2), CYP1A1(3), CYP1A2(1), CYP2A13(3), CYP2A6(2), CYP2A7(2), CYP2B6(5), CYP2C18(2), CYP2C19(5), CYP2C8(2), CYP2C9(2), CYP2E1(3), CYP2F1(2), CYP2J2(8), CYP3A4(1), CYP3A7(3), CYP4B1(5), CYP4F8(3), CYP51A1(3), DDC(6), EHHADH(3), GCDH(1), HADHA(2), KMO(3), KYNU(2), TDO2(2), TPH1(10), WARS(2), WARS2(8) 10712805 141 54 141 45 22 47 34 16 20 2 0.470 1.000 1.000 355 HIVNEFPATHWAY HIV-infected CD4 helper T cells may express Fas ligand, which binds to the Fas receptors of uninfected cells and induces apoptosis. ACTG1, ADPRT, APAF1, ARHGDIB, BAG4, BCL2, BID, BIRC2, BIRC3, BIRC4, CASP2, CASP3, CASP6, CASP7, CASP8, CASP9, CDC2L1, CDC2L2, CFLAR, CHUK, CRADD, CYCS, DAXX, DFFA, DFFB, FADD, GSN, LMNA, LMNB1, LMNB2, MAP2K7, MAP3K1, MAP3K14, MAP3K5, MAPK8, MDM2, NFKB1, NFKBIA, NUMA1, PAK2, PRKCD, PRKDC, PSEN1, PSEN2, PTK2, RASA1, RB1, RELA, RIPK1, SPTAN1, TNF, TNFRSF1A, TNFRSF1B, TNFRSF6, TNFSF6, TRADD, TRAF1, TRAF2 52 ACTG1(2), APAF1(4), BCL2(1), BID(1), BIRC2(2), BIRC3(2), CASP2(2), CASP3(4), CASP8(3), CASP9(2), CFLAR(1), CHUK(1), DAXX(2), DFFA(3), GSN(2), LMNB1(1), LMNB2(1), MAP2K7(1), MAP3K1(3), MAP3K14(1), MAP3K5(8), MAPK8(3), MDM2(1), NFKB1(2), NUMA1(4), PAK2(3), PRKCD(1), PRKDC(14), PSEN1(1), PSEN2(3), PTK2(7), RASA1(1), RB1(5), RIPK1(3), SPTAN1(7), TNFRSF1B(1) 13576347 103 53 103 37 23 28 24 10 18 0 0.899 1.000 1.000 356 HSA04330_NOTCH_SIGNALING_PATHWAY Genes involved in Notch signaling pathway ADAM17, APH1A, CIR, CREBBP, CTBP1, CTBP2, DLL1, DLL3, DLL4, DTX1, DTX2, DTX3, DTX3L, DTX4, DVL1, DVL2, DVL3, EP300, GCN5L2, HDAC1, HDAC2, HES1, JAG1, JAG2, LFNG, LOC652788, MAML1, MAML2, MAML3, MFNG, NCOR2, NCSTN, NOTCH1, NOTCH2, NOTCH3, NOTCH4, NUMB, NUMBL, PCAF, PSEN1, PSEN2, PSENEN, PTCRA, RBPJ, RBPJL, RFNG, SNW1 43 ADAM17(5), CREBBP(2), DLL1(2), DLL3(3), DLL4(1), DTX1(2), DTX2(1), DTX3(3), DTX3L(1), DTX4(1), DVL2(1), DVL3(2), EP300(1), HDAC1(1), HDAC2(6), HES1(1), JAG1(1), JAG2(1), LFNG(1), MAML1(4), MAML2(2), MAML3(5), NCOR2(6), NCSTN(4), NOTCH1(5), NOTCH2(20), NOTCH3(4), NOTCH4(15), NUMB(2), NUMBL(1), PSEN1(1), PSEN2(3), PTCRA(1), RBPJ(2), RBPJL(1), SNW1(2) 13533777 114 53 114 47 22 35 30 11 16 0 0.906 1.000 1.000 357 INOSITOL_PHOSPHATE_METABOLISM IMPA1, INPP1, INPP4A, INPP4B, INPP5A, INPPL1, ITPKA, ITPKB, MIOX, OCRL, PIK3C2A, PIK3C2B, PIK3C2G, PIK3CA, PIK3CB, PIK3CG, PIK4CA, PIK4CA, LOC220686, PIP5K2B, PLCB1, PLCB2, PLCB3, PLCB4, PLCD1, PLCG1, PLCG2 23 IMPA1(1), INPP1(1), INPP4A(3), INPP4B(10), INPP5A(3), INPPL1(3), ITPKA(1), ITPKB(4), OCRL(1), PIK3C2A(6), PIK3C2B(5), PIK3C2G(3), PIK3CA(5), PIK3CB(2), PIK3CG(6), PLCB1(9), PLCB2(4), PLCB3(3), PLCB4(10), PLCD1(1), PLCG1(4), PLCG2(4) 8740395 89 53 88 33 14 23 30 9 13 0 0.837 1.000 1.000 358 RIBOSOMAL_PROTEINS ANK2, APG10L, RPS23, B3GALT4, CDR1, DGKI, FAU, IL6ST, KIAA1394, LOC133957, MRPL19, NET_5, PIGK, RPL10, RPL11, RPL12, RPL13, RPL13, LOC388344, RPL13A, RPL13A, LOC283340, LOC387930, RPL14, RPL14, RPL14L, RPL15, RPL15, LOC136321, LOC402694, RPL17, RPL17, dJ612B15.1, RPL18, RPL18A, LOC285053, LOC347544, LOC390354, RPL18A, LOC390354, RPL19, RPL21, RPL21, LOC387753, LOC388143, LOC388532, LOC388621, LOC389156, LOC390488, LOC402336, LOC440487, LOC440575, RPL21, LOC387753, LOC388143, LOC388532, LOC388621, LOC389156, LOC390488, LOC440487, LOC440575, RPL22, RPL23, RPL24, RPL24, SLC36A2, RPL26, LOC391126, LOC392501, LOC400055, LOC441073, LOC441533, RPL27, RPL27A, RPL27A, LOC389435, RPL28, RPL29, RPL29, LOC283412, LOC284064, LOC389655, LOC391738, LOC401911, RPL3, RPL30, RPL31, RPL32, RPL34, LOC342994, RPL35, RPL35A, RPL36, RPL37, RPL38, RPL39, RPL3L, RPL4, RPL41, RPL5, RPL5, LOC388907, RPL5, RNU66, LOC388907, RPL6, RPL7, RPL7, LOC389305, RPL7, LOC90193, LOC388401, LOC389305, LOC392550, LOC439954, RPL7A, RPL7A, LOC133748, LOC388474, RPL7A, RNU36B, LOC133748, LOC388474, RPL8, RPL9, RPLP0, RPLP0, RPLP0_like, RPLP1, RPLP2, RPS10, RPS10, LOC158104, LOC388885, LOC389127, LOC390842, LOC401817, RPS10, LOC388885, RPS11, RPS12, RPS13, RPS14, RPS15, RPS16, RPS16, LOC441876, RPS17, RPS17, LOC402057, RPS18, RPS19, RPS2, RPS2, LOC91561, LOC148430, LOC286444, LOC400963, LOC440589, RPS20, RPS21, RPS23, RPS24, RPS25, RPS26, RPS26L, LOC440440, RPS27, RPS27A, RPS27A, LOC388720, LOC389425, RPS28, RPS29, RPS3, RPS3A, RPS3A, LOC146053, LOC400652, LOC401016, LOC439992, RPS4X, RPS4Y1, RPS5, RPS6, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA6, RPS6KB1, RPS6KB2, RPS7, RPS8, RPS9, RPSA, LOC388524, LOC388654, SCDR10, TBC1D10C, TSPAN9, UBA52, UBB, UBC 93 ANK2(29), CDR1(1), DGKI(12), RPL11(1), RPL12(1), RPL14(1), RPL19(2), RPL21(1), RPL22(1), RPL29(1), RPL30(2), RPL35(1), RPL37(1), RPL3L(1), RPL4(4), RPL5(1), RPL6(1), RPL7A(1), RPL8(1), RPLP0(1), RPLP2(1), RPS10(1), RPS12(1), RPS13(2), RPS15(1), RPS26(1), RPS29(1), RPS4Y1(1), RPS6KA2(2), RPS6KA3(1), RPS6KA6(3), RPS6KB2(1), SLC36A2(2), UBC(7) 10292523 89 53 89 26 19 34 18 9 8 1 0.537 1.000 1.000 359 WNT_SIGNALING Wnt signaling genes APC, ARHA, AXIN1, C2orf31, CCND1, CCND2, CCND3, CSNK1E, CSNK1E, LOC400927, CTNNB1, DIPA, DVL1, DVL2, DVL3, FBXW2, FOSL1, FRAT1, FZD1, FZD10, FZD2, FZD3, FZD5, FZD6, FZD7, FZD8, FZD9, GSK3B, JUN, LDLR, MAPK10, MAPK9, MYC, PAFAH1B1, PLAU, PPP2R5C, PPP2R5E, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCG, PRKCH, PRKCI, PRKCM, PRKCQ, PRKCZ, PRKD1, RAC1, RHOA, SFRP4, TCF7, WNT1, WNT10A, WNT10B, WNT11, WNT16, WNT2, WNT2B, WNT3, WNT4, WNT5A, WNT5B, WNT6, WNT7A, WNT7B 58 APC(6), AXIN1(2), CCND1(2), CCND3(1), CSNK1E(2), CTNNB1(9), DVL2(1), DVL3(2), FBXW2(1), FOSL1(2), FZD1(2), FZD10(5), FZD2(1), FZD3(3), FZD7(1), FZD9(1), GSK3B(1), LDLR(1), MAPK10(1), MAPK9(5), PPP2R5E(2), PRKCA(7), PRKCD(1), PRKCE(1), PRKCG(5), PRKCH(2), PRKCI(5), PRKCQ(3), PRKD1(8), RHOA(1), SFRP4(1), TCF7(1), WNT1(3), WNT10A(2), WNT10B(2), WNT11(1), WNT16(2), WNT2(2), WNT4(1), WNT5A(1), WNT5B(1), WNT6(1), WNT7A(4), WNT7B(2) 11624835 108 53 107 38 29 30 27 10 12 0 0.653 1.000 1.000 360 GLUCONEOGENESIS ACYP1, ACYP2, ADH1A, ADH1A, ADH1B, ADH1C, ADH1B, ADH1C, ADH4, ADH6, ADH7, ADHFE1, AKR1A1, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH3B1, ALDH3B2, ALDH9A1, ALDOA, ALDOB, ALDOC, BPGM, DLAT, DLD, ENO1, ENO2, ENO3, FBP1, FBP2, G6PC, GAPDH, GCK, GPI, HK1, HK2, HK3, LDHA, LDHB, LDHC, PDHA1, PDHA2, PDHB, PFKM, PFKP, PGAM1, PGK1, PGM1, PGM3, PKLR, PKM2, TPI1 53 ACYP2(1), ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH6(4), ADH7(3), ADHFE1(2), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH3B2(3), ALDH9A1(2), ALDOA(1), ALDOB(2), ALDOC(1), DLAT(3), DLD(3), ENO1(1), ENO3(1), G6PC(1), GAPDH(2), GCK(1), GPI(3), HK1(3), HK2(5), HK3(5), LDHA(3), LDHC(4), PDHA1(1), PDHA2(8), PFKM(2), PFKP(3), PGK1(4), PGM1(2), PGM3(2), PKLR(4), PKM2(2), TPI1(3) 9475308 120 52 119 42 27 52 22 10 9 0 0.708 1.000 1.000 361 GLYCEROLIPID_METABOLISM ADH1A, ADH1A, ADH1B, ADH1C, ADH1B, ADH1C, ADH4, ADH6, ADH7, ADHFE1, AGPAT1, AGPAT2, AGPAT3, AGPAT4, AKR1A1, AKR1B1, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, CEL, DGAT1, DGKA, DGKB, DGKD, DGKE, DGKG, DGKH, DGKQ, DGKZ, GK, GLA, GLB1, LCT, LIPC, LIPF, LIPG, LPL, PNLIP, PNLIPRP1, PNLIPRP2, PPAP2A, PPAP2B, PPAP2C 45 ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH6(4), ADH7(3), ADHFE1(2), AGPAT1(1), AGPAT2(3), AGPAT3(2), AGPAT4(1), AKR1B1(1), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH9A1(2), CEL(3), DGAT1(1), DGKA(2), DGKB(8), DGKD(2), DGKE(3), DGKG(4), DGKZ(3), GK(2), GLA(2), LCT(12), LIPC(5), LIPF(2), LIPG(2), LPL(2), PNLIP(4), PNLIPRP1(5), PNLIPRP2(4), PPAP2B(1) 9440607 121 52 121 33 13 50 26 14 18 0 0.369 1.000 1.000 362 GLYCOLYSIS ACYP1, ACYP2, ADH1A, ADH1A, ADH1B, ADH1C, ADH1B, ADH1C, ADH4, ADH6, ADH7, ADHFE1, AKR1A1, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH3B1, ALDH3B2, ALDH9A1, ALDOA, ALDOB, ALDOC, BPGM, DLAT, DLD, ENO1, ENO2, ENO3, FBP1, FBP2, G6PC, GAPDH, GCK, GPI, HK1, HK2, HK3, LDHA, LDHB, LDHC, PDHA1, PDHA2, PDHB, PFKM, PFKP, PGAM1, PGK1, PGM1, PGM3, PKLR, PKM2, TPI1 53 ACYP2(1), ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH6(4), ADH7(3), ADHFE1(2), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH3B2(3), ALDH9A1(2), ALDOA(1), ALDOB(2), ALDOC(1), DLAT(3), DLD(3), ENO1(1), ENO3(1), G6PC(1), GAPDH(2), GCK(1), GPI(3), HK1(3), HK2(5), HK3(5), LDHA(3), LDHC(4), PDHA1(1), PDHA2(8), PFKM(2), PFKP(3), PGK1(4), PGM1(2), PGM3(2), PKLR(4), PKM2(2), TPI1(3) 9475308 120 52 119 42 27 52 22 10 9 0 0.708 1.000 1.000 363 PYRIMIDINE_METABOLISM AK3, AK3L1, AK3L1, AK3L2, CAD, CANT1, CDA, CMPK, CTPS, CTPS2, DCK, DCTD, DHODH, DPYD, DPYS, DTYMK, DUT, ECGF1, ENTPD1, ITPA, NME1, NME2, NP, NT5C, NT5E, NT5M, NUDT2, POLA, POLB, POLD1, POLD2, POLE, POLG, POLL, POLQ, POLR1B, POLR2A, POLR2B, POLR2C, POLR2D, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR2L, POLRMT, POLS, RRM1, RRM2, TK1, TK2, TXNRD1, TYMS, UCK1, UCK2, UMPS, UNG, UPB1, UPP1 55 CAD(9), CANT1(1), CTPS(4), CTPS2(1), DCK(1), DCTD(1), DHODH(1), DPYD(10), DPYS(6), DTYMK(2), ENTPD1(4), NT5E(1), NT5M(1), NUDT2(2), POLB(2), POLD1(1), POLE(12), POLG(8), POLQ(10), POLR1B(8), POLR2A(6), POLR2B(1), POLR2C(2), POLR2D(2), POLR2E(1), POLR2G(2), POLR2H(2), POLR2L(1), POLRMT(1), RRM1(5), RRM2(4), TXNRD1(1), UCK2(2), UMPS(2), UNG(2), UPP1(6) 11156823 125 52 124 36 34 28 35 12 15 1 0.271 1.000 1.000 364 SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES Genes related to the insulin receptor pathway AKT1, AKT2, AKT3, BRD4, CAP1, CBL, CDC42, CDKN2A, F2RL2, FLOT1, FLOT2, FOXO1A, GRB2, GSK3A, GSK3B, IGFBP1, INPPL1, IRS1, IRS2, IRS4, LNPEP, MAPK1, MAPK3, PARD3, PARD6A, PDK1, PIK3CA, PIK3CD, PIK3R1, PPYR1, PSCD3, PTEN, PTPN1, RAF1, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KB1, SERPINB6, SFN, SHC1, SLC2A4, SORBS1, SOS1, SOS2, YWHAB, YWHAE, YWHAG, YWHAH, YWHAQ, YWHAZ 49 AKT2(1), AKT3(2), BRD4(3), CBL(7), CDC42(2), CDKN2A(7), F2RL2(2), FLOT1(2), GRB2(3), GSK3B(1), IGFBP1(2), INPPL1(3), IRS1(12), IRS2(2), IRS4(7), LNPEP(1), MAPK3(1), PARD3(4), PDK1(2), PIK3CA(5), PIK3R1(1), PPYR1(1), PTEN(3), PTPN1(1), RAF1(2), RPS6KA2(2), RPS6KA3(1), SHC1(2), SORBS1(4), SOS1(9), SOS2(5), YWHAG(1) 11518281 101 52 99 46 28 16 28 17 12 0 0.951 1.000 1.000 365 HSA00564_GLYCEROPHOSPHOLIPID_METABOLISM Genes involved in glycerophospholipid metabolism ACHE, AGPAT1, AGPAT2, AGPAT3, AGPAT4, AGPAT6, ARD1A, CDIPT, CDS1, CDS2, CHAT, CHKA, CHKB, CHPT1, CRLS1, DGKA, DGKB, DGKD, DGKE, DGKG, DGKH, DGKI, DGKQ, DGKZ, ESCO1, ESCO2, ETNK1, ETNK2, GNPAT, GPAM, GPD1, GPD1L, GPD2, LCAT, LYCAT, LYPLA1, LYPLA2, LYPLA3, MYST3, MYST4, NAT5, NAT6, PCYT1A, PCYT1B, PEMT, PHOSPHO1, PISD, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLD1, PLD2, PNPLA3, PPAP2A, PPAP2B, PPAP2C, PTDSS1, PTDSS2, SH3GLB1 64 AGPAT1(1), AGPAT2(3), AGPAT3(2), AGPAT4(1), AGPAT6(1), CDIPT(1), CDS1(2), CDS2(2), CHAT(2), CHKB(2), DGKA(2), DGKB(8), DGKD(2), DGKE(3), DGKG(4), DGKI(12), DGKZ(3), ESCO1(5), ESCO2(2), ETNK1(1), GNPAT(3), GPAM(1), GPD1(1), GPD1L(3), GPD2(2), LCAT(1), LYPLA2(1), MYST3(7), MYST4(6), PCYT1A(2), PCYT1B(1), PLA2G10(1), PLA2G12B(1), PLA2G1B(1), PLA2G2A(3), PLA2G2E(1), PLA2G2F(1), PLA2G3(4), PLA2G4A(5), PLA2G6(1), PLD1(7), PLD2(3), PNPLA3(1), PPAP2B(1), PTDSS1(4), PTDSS2(1), SH3GLB1(1) 12806346 123 51 123 40 25 34 27 19 17 1 0.670 1.000 1.000 366 NOS1PATHWAY Glutamate stimulates NMDA-mediates calcium influx, which promotes nitric oxide synthesis from arginine by neuronal nitric oxide synthase, activating guanylate cyclase. CALM1, CALM2, CALM3, DLG4, GRIN1, GRIN2A, GRIN2B, GRIN2C, GRIN2D, NOS1, PPP3CA, PPP3CB, PPP3CC, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, SYT1 21 CALM1(1), DLG4(1), GRIN1(1), GRIN2A(19), GRIN2B(13), GRIN2C(3), GRIN2D(5), NOS1(5), PPP3CA(2), PPP3CB(1), PPP3CC(1), PRKACB(2), PRKACG(1), PRKAR1B(4), PRKCA(7), SYT1(3) 4971273 69 51 69 36 10 23 18 10 8 0 0.995 1.000 1.000 367 SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES Genes related to PIP3 signaling in B lymphocytes AKT1, AKT2, AKT3, BCR, BTK, CD19, CDKN2A, DAPP1, FLOT1, FLOT2, FOXO3A, GAB1, ITPR1, ITPR2, ITPR3, LYN, NR0B2, P101-PI3K, PDK1, PHF11, PIK3CA, PITX2, PLCG2, PPP1R13B, PREX1, PSCD3, PTEN, PTPRC, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KB1, SAG, SYK, TEC, VAV1 33 AKT2(1), AKT3(2), BCR(3), BTK(7), CD19(1), CDKN2A(7), DAPP1(1), FLOT1(2), GAB1(2), ITPR1(7), ITPR2(15), ITPR3(4), LYN(3), PDK1(2), PIK3CA(5), PITX2(3), PLCG2(4), PPP1R13B(2), PREX1(12), PTEN(3), PTPRC(10), RPS6KA2(2), RPS6KA3(1), SAG(2), SYK(1), TEC(4), VAV1(1) 10841031 107 51 104 33 19 32 29 13 14 0 0.561 1.000 1.000 368 ST_B_CELL_ANTIGEN_RECEPTOR B cell receptors bind antigens and promote B cell activation. AKT1, AKT2, AKT3, BAD, BCR, BLNK, BTK, CD19, CSK, DAG1, EPHB2, GRB2, ITPKA, ITPKB, LYN, MAP2K1, MAP2K2, MAPK1, NFAT5, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, PAG, PI3, PIK3CA, PIK3CD, PIK3R1, PLCG2, PPP1R13B, RAF1, SERPINA4, SHC1, SOS1, SOS2, SYK, VAV1 39 AKT2(1), AKT3(2), BCR(3), BTK(7), CD19(1), DAG1(2), EPHB2(4), GRB2(3), ITPKA(1), ITPKB(4), LYN(3), MAP2K1(4), NFAT5(4), NFKB1(2), NFKB2(3), NFKBIE(1), PI3(1), PIK3CA(5), PIK3R1(1), PLCG2(4), PPP1R13B(2), RAF1(2), SERPINA4(7), SHC1(2), SOS1(9), SOS2(5), SYK(1), VAV1(1) 10191903 85 51 84 28 11 22 25 15 12 0 0.630 1.000 1.000 369 TCRPATHWAY T cell receptors bind to foreign peptides presented by MHC molecules and induce T cell activation. CALM1, CALM2, CALM3, CD3D, CD3E, CD3G, CD3Z, ELK1, FOS, FYN, GRB2, HRAS, JUN, LAT, LCK, MAP2K1, MAP2K4, MAP3K1, MAPK3, MAPK8, NFATC1, NFATC2, NFATC3, NFATC4, NFKB1, NFKBIA, PIK3CA, PIK3R1, PLCG1, PPP3CA, PPP3CB, PPP3CC, PRKCA, PRKCB1, PTPN7, RAC1, RAF1, RASA1, RELA, SHC1, SOS1, SYT1, TRA@, TRB@, VAV1, ZAP70 42 CALM1(1), CD3D(1), FYN(2), GRB2(3), HRAS(1), LAT(3), LCK(5), MAP2K1(4), MAP2K4(2), MAP3K1(3), MAPK3(1), MAPK8(3), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), NFKB1(2), PIK3CA(5), PIK3R1(1), PLCG1(4), PPP3CA(2), PPP3CB(1), PPP3CC(1), PRKCA(7), RAF1(2), RASA1(1), SHC1(2), SOS1(9), SYT1(3), VAV1(1), ZAP70(2) 9240915 87 51 86 27 18 22 26 10 11 0 0.476 1.000 1.000 370 ERKPATHWAY Cell growth is promoted by Ras activation of the anti-apoptotic p44/42 MAP kinase pathway. DPM2, EGFR, ELK1, GNAS, GNB1, GNGT1, GRB2, HRAS, IGF1R, ITGB1, KLK2, MAP2K1, MAP2K2, MAPK1, MAPK3, MKNK1, MKNK2, MYC, NGFB, NGFR, PDGFRA, PPP2CA, PTPRR, RAF1, RPS6KA1, RPS6KA5, SHC1, SOS1, SRC, STAT3 29 EGFR(24), GNAS(3), GNB1(1), GNGT1(1), GRB2(3), HRAS(1), IGF1R(6), ITGB1(2), KLK2(2), MAP2K1(4), MAPK3(1), MKNK1(1), NGFR(2), PDGFRA(7), PTPRR(7), RAF1(2), RPS6KA5(2), SHC1(2), SOS1(9), SRC(2), STAT3(4) 6408462 86 50 76 27 11 27 17 21 10 0 0.776 1.000 1.000 371 GPCRDB_CLASS_B_SECRETIN_LIKE ADCYAP1R1, CALCR, CALCRL, CD97, CRHR1, CRHR2, ELTD1, EMR1, EMR2, GCGR, GHRHR, GIPR, GLP1R, GLP2R, GPR64, LPHN1, LPHN2, LPHN3, PTHR1, PTHR2, SCTR, VIPR1, VIPR2 20 ADCYAP1R1(3), CALCR(4), CALCRL(5), CD97(3), CRHR1(1), CRHR2(2), ELTD1(8), EMR1(4), EMR2(2), GHRHR(2), GIPR(2), GLP2R(5), GPR64(3), LPHN1(1), LPHN2(13), LPHN3(19), SCTR(1), VIPR2(2) 5222307 80 50 80 34 6 30 17 19 8 0 0.966 1.000 1.000 372 VEGFPATHWAY Vascular endothelial growth factor (VEGF) is upregulated by hypoxic conditions and promotes normal blood vessel formation and angiogenesis related to tumor growth or cardiac disease. ARNT, EIF1, EIF1A, EIF2B1, EIF2B2, EIF2B3, EIF2B4, EIF2B5, EIF2S1, EIF2S2, EIF2S3, ELAVL1, FLT1, FLT4, HIF1A, HRAS, KDR, NOS3, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, PTK2, PXN, SHC1, VEGF, VHL 25 ARNT(2), EIF2B2(2), EIF2B3(3), EIF2B4(2), EIF2B5(3), EIF2S3(1), ELAVL1(2), FLT1(12), FLT4(8), HIF1A(1), HRAS(1), KDR(16), NOS3(1), PIK3CA(5), PIK3R1(1), PLCG1(4), PRKCA(7), PTK2(7), SHC1(2), VHL(1) 6616152 81 50 79 23 14 25 21 10 11 0 0.442 1.000 1.000 373 MCALPAINPATHWAY In integrin-mediated cell migration, calpains digest links between the actin cytoskeleton and focal adhesion proteins. ACTA1, CAPN1, CAPN2, CAPNS1, CAPNS2, CXCR3, EGF, EGFR, HRAS, ITGA1, ITGB1, MAPK1, MAPK3, MYL2, MYLK, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PTK2, PXN, TLN1, VIL2 24 CXCR3(1), EGF(7), EGFR(24), HRAS(1), ITGA1(5), ITGB1(2), MAPK3(1), MYL2(2), MYLK(10), PRKACB(2), PRKACG(1), PRKAR1B(4), PTK2(7), TLN1(9) 6358926 76 49 65 23 9 19 15 19 14 0 0.678 1.000 1.000 374 ST_MYOCYTE_AD_PATHWAY Cardiac myocytes have a variety of adrenergic receptors that induce subtype-specific signaling effects. ADRB1, AKT1, APC, ASAH1, BF, CAMP, CAV3, DAG1, DLG4, EPHB2, GAS, GNAI1, GNAQ, HTATIP, ITPR1, ITPR2, ITPR3, KCNJ3, KCNJ5, KCNJ9, MAPK1, PITX2, PLB, PTX1, PTX3, RAC1, RHO, RYR1 23 APC(6), ASAH1(2), DAG1(2), DLG4(1), EPHB2(4), GNAI1(1), GNAQ(2), ITPR1(7), ITPR2(15), ITPR3(4), KCNJ3(10), PITX2(3), PTX3(2), RYR1(26) 8974401 85 49 84 22 14 26 29 7 9 0 0.189 1.000 1.000 375 ST_GA13_PATHWAY G-alpha-13 influences the actin cytoskeleton and activates protein kinase D, PI3K, and Pyk2. AKT1, AKT2, AKT3, ARHGEF11, BCL2, BF, CDC42, DLG4, GNA13, IKBKG, LPA, MAP2K4, MAP3K1, MAP3K5, MAPK8, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, PDK1, PHKA2, PI3, PIK3CB, PLD1, PLD2, PLD3, PRKCM, PTK2, RDX, ROCK1, ROCK2, SERPINA4, SRF, TBXA2R 34 AKT2(1), AKT3(2), ARHGEF11(6), BCL2(1), CDC42(2), DLG4(1), GNA13(1), LPA(16), MAP2K4(2), MAP3K1(3), MAP3K5(8), MAPK8(3), NFKB1(2), NFKB2(3), NFKBIE(1), PDK1(2), PHKA2(6), PI3(1), PIK3CB(2), PLD1(7), PLD2(3), PTK2(7), RDX(1), ROCK1(7), ROCK2(3), SERPINA4(7) 9502011 98 48 98 27 21 25 22 17 13 0 0.383 1.000 1.000 376 ARGININE_AND_PROLINE_METABOLISM ABP1, AGMAT, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH4A1, ALDH9A1, AMD1, AOC2, AOC3, ARG1, ARG2, ASL, ASS, CKB, CKM, CKMT1, CKMT1B, CKMT1A, CKMT2, CPS1, DAO, GAMT, GATM, GLUD1, GOT1, GOT2, MAOA, MAOB, NOS1, NOS2A, NOS3, OAT, ODC1, OTC, P4HA1, P4HA2, P4HA3, P4HB, PYCR1, RARS, SAT, SMS 43 ABP1(4), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH4A1(1), ALDH9A1(2), AMD1(1), AOC2(3), AOC3(2), ARG1(1), ASL(2), CKM(1), CKMT1A(1), CKMT1B(1), CKMT2(1), CPS1(23), DAO(1), GATM(3), GLUD1(3), GOT1(2), GOT2(3), NOS1(5), NOS3(1), OAT(1), OTC(2), P4HA1(2), P4HA3(1), P4HB(2), RARS(4), SMS(1) 8605977 92 47 92 37 17 28 28 10 9 0 0.885 1.000 1.000 377 BIOPEPTIDESPATHWAY Extracellular signaling peptides exert biological effects via G-protein coupled receptors (GPCRs), which activate intracellular GTPases. AGT, AGTR2, BDK, CALM1, CALM2, CALM3, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CDK5, F2, FYN, GNA11, GNAI1, GNB1, GNGT1, GRB2, HRAS, JAK2, MAP2K1, MAP2K2, MAPK1, MAPK14, MAPK3, MAPK8, MAPT, MYLK, PLCG1, PRKCA, PRKCB1, PTK2B, RAF1, SHC1, SOS1, STAT1, STAT3, STAT5A, SYT1 37 AGTR2(2), CALM1(1), CAMK2A(1), CAMK2D(1), CAMK2G(2), CDK5(1), F2(5), FYN(2), GNAI1(1), GNB1(1), GNGT1(1), GRB2(3), HRAS(1), JAK2(2), MAP2K1(4), MAPK14(1), MAPK3(1), MAPK8(3), MAPT(2), MYLK(10), PLCG1(4), PRKCA(7), PTK2B(6), RAF1(2), SHC1(2), SOS1(9), STAT1(2), STAT3(4), STAT5A(2), SYT1(3) 8096685 86 47 85 30 19 24 17 14 12 0 0.726 1.000 1.000 378 GLYCOLYSIS_AND_GLUCONEOGENESIS Genes involved in glycolysis and gluconeogenesis ALDOA, ALDOB, ALDOC, DLAT, DLD, ENO1, ENO2, ENO3, FBP1, FBP2, G6PC, GAPDH, GAPDHS, GAPDS, GCK, GOT1, GOT2, GPI, HK1, HK2, HK3, LDHA, LDHAL6B, LDHB, LDHC, MDH1, MDH2, PC, PCK1, PDHA1, PDHA2, PDHB, PDHX, PFKL, PFKM, PFKP, PGAM1, PGAM2, PGK1, PGK2, PKLR, PKM2, TNFAIP1, TPI1 43 ALDOA(1), ALDOB(2), ALDOC(1), DLAT(3), DLD(3), ENO1(1), ENO3(1), G6PC(1), GAPDH(2), GAPDHS(4), GCK(1), GOT1(2), GOT2(3), GPI(3), HK1(3), HK2(5), HK3(5), LDHA(3), LDHC(4), MDH1(1), PC(1), PCK1(8), PDHA1(1), PDHA2(8), PDHX(1), PFKL(1), PFKM(2), PFKP(3), PGAM2(1), PGK1(4), PGK2(11), PKLR(4), PKM2(2), TPI1(3) 8238972 99 47 98 36 27 29 21 13 9 0 0.676 1.000 1.000 379 HSA00620_PYRUVATE_METABOLISM Genes involved in pyruvate metabolism ACACA, ACACB, ACAT1, ACAT2, ACOT12, ACSS1, ACSS2, ACYP1, ACYP2, AKR1B1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, DLAT, DLD, GLO1, GRHPR, HAGH, HAGHL, LDHA, LDHAL6A, LDHAL6B, LDHB, LDHC, LDHD, MDH1, MDH2, ME1, ME2, ME3, PC, PCK1, PCK2, PDHA1, PDHA2, PDHB, PKLR, PKM2 42 ACACA(8), ACACB(7), ACAT1(1), ACOT12(3), ACSS1(1), ACSS2(3), ACYP2(1), AKR1B1(1), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2), DLAT(3), DLD(3), GLO1(1), GRHPR(1), HAGHL(1), LDHA(3), LDHAL6A(3), LDHC(4), MDH1(1), ME1(1), ME2(6), ME3(2), PC(1), PCK1(8), PCK2(1), PDHA1(1), PDHA2(8), PKLR(4), PKM2(2) 9068313 93 47 92 30 24 28 22 9 10 0 0.536 1.000 1.000 380 TOLLPATHWAY Toll-like receptors are activated by bacterial lipoproteins, lipopolysaccharides, and other surface molecules, and activate pro-inflammatory factors such as NF-kB. CD14, CHUK, ELK1, FOS, IKBKB, IKBKG, IRAK1, JUN, LY96, MAP2K3, MAP2K4, MAP2K6, MAP3K1, MAP3K14, MAP3K7, MAP3K7IP1, MAP3K7IP2, MAPK14, MAPK8, MYD88, NFKB1, NFKBIA, PGLYRP, PPARA, PRKR, RELA, SITPEC, TIRAP, TLR10, TLR2, TLR3, TLR4, TLR6, TLR7, TLR9, TOLLIP, TRAF6 31 CD14(1), CHUK(1), IKBKB(2), IRAK1(2), LY96(1), MAP2K3(3), MAP2K4(2), MAP3K1(3), MAP3K14(1), MAP3K7(3), MAPK14(1), MAPK8(3), MYD88(2), NFKB1(2), TLR10(4), TLR4(23), TLR6(2), TLR7(6), TLR9(5), TRAF6(3) 7059138 70 47 69 28 9 21 19 10 11 0 0.921 1.000 1.000 381 PDGFPATHWAY Platelet-derived growth factor (PDGF) receptor is phosphorylated on ligand binding and promotes cell proliferation. CSNK2A1, ELK1, FOS, GRB2, HRAS, JAK1, JUN, MAP2K1, MAP2K4, MAP3K1, MAPK3, MAPK8, PDGFA, PDGFRA, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, RAF1, RASA1, SHC1, SOS1, SRF, STAT1, STAT3, STAT5A 26 GRB2(3), HRAS(1), JAK1(5), MAP2K1(4), MAP2K4(2), MAP3K1(3), MAPK3(1), MAPK8(3), PDGFA(6), PDGFRA(7), PIK3CA(5), PIK3R1(1), PLCG1(4), PRKCA(7), RAF1(2), RASA1(1), SHC1(2), SOS1(9), STAT1(2), STAT3(4), STAT5A(2) 6742701 74 46 73 21 13 16 21 14 10 0 0.428 1.000 1.000 382 PPARAPATHWAY Peroxisome proliferators regulate gene expression via PPAR/RXR heterodimers which bind to peroxisome-proliferator response elements (PPREs). ACOX1, APOA1, APOA2, CD36, CITED2, CPT1B, CREBBP, DUSP1, DUT, EHHADH, EP300, FABP1, FAT, FRA8B, HSD17B4, HSPA1A, HSPCA, INS, JUN, LPL, MAPK1, MAPK3, ME1, MRPL11, MYC, NCOA1, NCOR1, NCOR2, NFKBIA, NOS2A, NR0B2, NR1H3, NR2F1, NRIP1, PDGFA, PIK3CA, PIK3R1, PPARA, PPARBP, PPARGC1, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, PTGS2, RB1, RELA, RXRA, SP1, SRA1, STAT5A, STAT5B, TNF 50 ACOX1(2), APOA1(1), CD36(3), CITED2(1), CPT1B(3), CREBBP(2), EHHADH(3), EP300(1), FABP1(1), LPL(2), MAPK3(1), ME1(1), NCOA1(4), NCOR1(8), NCOR2(6), NR1H3(2), NRIP1(2), PDGFA(6), PIK3CA(5), PIK3R1(1), PRKACB(2), PRKACG(1), PRKAR1B(4), PRKCA(7), PTGS2(4), RB1(5), STAT5A(2), STAT5B(3) 12247260 83 46 82 33 19 23 20 9 12 0 0.880 1.000 1.000 383 BCRPATHWAY B cell antigen receptors (BCRs) activate tyrosine kinases and transiently increase tyrosine phosphorylation on binding to antigen. BLNK, BTK, CALM1, CALM2, CALM3, CD79A, CD79B, ELK1, FOS, GRB2, HRAS, JUN, LYN, MAP2K1, MAP3K1, MAPK14, MAPK3, MAPK8, NFATC1, NFATC2, NFATC3, NFATC4, PLCG1, PPP3CA, PPP3CB, PPP3CC, PRKCA, PRKCB1, RAC1, RAF1, SHC1, SOS1, SYK, SYT1, VAV1 34 BTK(7), CALM1(1), CD79B(1), GRB2(3), HRAS(1), LYN(3), MAP2K1(4), MAP3K1(3), MAPK14(1), MAPK3(1), MAPK8(3), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), PLCG1(4), PPP3CA(2), PPP3CB(1), PPP3CC(1), PRKCA(7), RAF1(2), SHC1(2), SOS1(9), SYK(1), SYT1(3), VAV1(1) 7393635 76 45 76 23 16 20 21 10 9 0 0.392 1.000 1.000 384 HSA00590_ARACHIDONIC_ACID_METABOLISM Genes involved in arachidonic acid metabolism AKR1C3, ALOX12, ALOX12B, ALOX15, ALOX15B, ALOX5, CBR1, CBR3, CYP2B6, CYP2C18, CYP2C19, CYP2C8, CYP2C9, CYP2E1, CYP2J2, CYP2U1, CYP4A11, CYP4A22, CYP4F2, CYP4F3, DHRS4, EPHX2, GGT1, GGTL3, GGTL4, GPX1, GPX2, GPX3, GPX4, GPX5, GPX6, GPX7, LTA4H, LTC4S, PGDS, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PTGDS, PTGES, PTGES2, PTGIS, PTGS1, PTGS2, TBXAS1 51 AKR1C3(1), ALOX12(1), ALOX15(1), ALOX15B(1), ALOX5(3), CYP2B6(5), CYP2C18(2), CYP2C19(5), CYP2C8(2), CYP2C9(2), CYP2E1(3), CYP2J2(8), CYP2U1(1), CYP4A11(3), CYP4F2(3), CYP4F3(7), DHRS4(1), GGT1(1), GPX1(1), GPX3(1), GPX5(3), GPX6(1), GPX7(2), PLA2G10(1), PLA2G12B(1), PLA2G1B(1), PLA2G2A(3), PLA2G2E(1), PLA2G2F(1), PLA2G3(4), PLA2G4A(5), PLA2G6(1), PTGDS(2), PTGIS(1), PTGS1(3), PTGS2(4), TBXAS1(4) 7539276 90 45 90 33 16 24 28 12 9 1 0.609 1.000 1.000 385 HSA00860_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM Genes involved in porphyrin and chlorophyll metabolism ALAD, ALAS1, ALAS2, BLVRA, BLVRB, COX10, COX15, CP, CPOX, EARS2, EPRS, FECH, FTH1, FTMT, GUSB, HCCS, HMBS, HMOX1, HMOX2, MMAB, PPOX, UGT1A1, UGT1A10, UGT1A3, UGT1A4, UGT1A5, UGT1A6, UGT1A7, UGT1A8, UGT1A9, UGT2A1, UGT2A3, UGT2B10, UGT2B11, UGT2B15, UGT2B17, UGT2B28, UGT2B4, UGT2B7, UROD, UROS 41 ALAD(2), ALAS1(3), BLVRB(1), COX15(2), CP(4), CPOX(3), EARS2(1), EPRS(9), FTMT(1), GUSB(2), HMBS(2), HMOX1(3), PPOX(2), UGT1A1(3), UGT1A10(3), UGT1A3(3), UGT1A4(1), UGT1A5(1), UGT1A6(2), UGT1A7(2), UGT1A9(4), UGT2A1(3), UGT2A3(4), UGT2B10(11), UGT2B11(9), UGT2B15(4), UGT2B28(6), UGT2B4(6), UGT2B7(5) 8246841 102 45 101 36 13 41 21 15 12 0 0.868 1.000 1.000 386 HSA04612_ANTIGEN_PROCESSING_AND_PRESENTATION Genes involved in antigen processing and presentation B2M, CALR, CANX, CD4, CD74, CD8A, CD8B, CIITA, CREB1, CTSB, CTSL1, CTSS, HLA-A, HLA-A29.1, HLA-B, HLA-C, HLA-DMA, HLA-DMB, HLA-DOA, HLA-DOB, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2, HLA-DRA, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, HLA-E, HLA-F, HLA-G, HSP90AA1, HSP90AB1, HSPA5, IFI30, IFNA1, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA2, IFNA21, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, KIR2DL1, KIR2DL2, KIR2DL3, KIR2DL4, KIR2DL5A, KIR2DS1, KIR2DS2, KIR2DS3, KIR2DS4, KIR2DS5, KIR3DL1, KIR3DL2, KIR3DL3, KLRC1, KLRC2, KLRC3, KLRC4, KLRD1, LGMN, LTA, NFYA, NFYB, NFYC, PDIA3, PSME1, PSME2, RFX5, RFXANK, RFXAP, TAP1, TAP2, TAPBP 73 CALR(1), CANX(2), CD4(1), CD8A(1), CD8B(1), CIITA(1), CTSS(1), HLA-A(1), HLA-B(1), HLA-DMA(2), HLA-DMB(1), HLA-DOB(1), HLA-DPA1(2), HLA-DQA2(1), HLA-DRA(2), HSP90AA1(4), HSP90AB1(2), HSPA5(3), IFNA10(1), IFNA14(3), IFNA16(1), IFNA17(1), IFNA2(3), IFNA21(1), IFNA4(1), IFNA6(2), IFNA7(3), IFNA8(1), KIR2DL1(1), KIR2DL3(1), KIR2DL4(1), KIR2DS4(1), KIR3DL1(5), KLRC1(1), KLRC2(2), KLRC3(3), KLRD1(1), LGMN(3), NFYB(1), NFYC(1), PSME1(1), PSME2(1), RFX5(5), TAP2(3) 9100434 76 45 76 33 15 19 20 11 11 0 0.940 1.000 1.000 387 GPCRPATHWAY G-protein coupled receptors activate adenylyl cyclase, which converts ATP to cAMP, to activate second messenger pathways. ADCY1, CALM1, CALM2, CALM3, CREB1, ELK1, FOS, GNAI1, GNAQ, GNAS, GNB1, GNGT1, HRAS, JUN, MAP2K1, MAPK3, NFATC1, NFATC2, NFATC3, NFATC4, PLCG1, PPP3CA, PPP3CB, PPP3CC, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, RAF1, RPS6KA3, SYT1 34 ADCY1(8), CALM1(1), GNAI1(1), GNAQ(2), GNAS(3), GNB1(1), GNGT1(1), HRAS(1), MAP2K1(4), MAPK3(1), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), PLCG1(4), PPP3CA(2), PPP3CB(1), PPP3CC(1), PRKACB(2), PRKACG(1), PRKAR1B(4), PRKCA(7), RAF1(2), RPS6KA3(1), SYT1(3) 6758052 66 44 66 19 15 20 18 6 7 0 0.380 1.000 1.000 388 HSA00512_O_GLYCAN_BIOSYNTHESIS Genes involved in O-glycan biosynthesis B3GNT6, B4GALT5, C1GALT1, C1GALT1C1, GALNT1, GALNT10, GALNT11, GALNT12, GALNT13, GALNT14, GALNT17, GALNT2, GALNT3, GALNT4, GALNT5, GALNT6, GALNT7, GALNT8, GALNT9, GALNTL1, GALNTL2, GALNTL4, GALNTL5, GCNT1, GCNT3, GCNT4, OGT, ST3GAL1, ST3GAL2, ST6GALNAC1, WBSCR17 30 B3GNT6(2), B4GALT5(3), C1GALT1(2), C1GALT1C1(1), GALNT1(1), GALNT10(1), GALNT11(1), GALNT12(3), GALNT13(9), GALNT14(6), GALNT2(1), GALNT3(2), GALNT4(3), GALNT5(4), GALNT6(2), GALNT7(4), GALNT8(6), GALNT9(1), GALNTL1(2), GALNTL2(5), GALNTL4(2), GALNTL5(2), GCNT1(2), GCNT3(2), OGT(1), ST3GAL1(2), ST3GAL2(2), ST6GALNAC1(1), WBSCR17(8) 6248502 81 44 81 37 21 20 18 15 7 0 0.981 1.000 1.000 389 ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS Rat-derived PC12 cells respond to nerve growth factor (NGF) and PACAP to differentiate into neuronal cells. AKT1, ASAH1, ATF1, BRAF, CAMP, CREB1, CREB3, CREB5, CREBBP, CRKL, DAG1, EGR1, EGR2, EGR3, EGR4, ELK1, FRS2, GAS, GNAQ, GRF2, JUN, MAP1B, MAP2K4, MAP2K7, MAPK1, MAPK10, MAPK3, MAPK8, MAPK8IP1, MAPK8IP2, MAPK8IP3, MAPK9, NTRK1, OPN1LW, PACAP, PIK3C2G, PIK3CA, PIK3CD, PIK3R1, PTPN11, RPS6KA3, SH2B, SHC1, SRC, TERF2IP, TH, TUBA3 42 ASAH1(2), BRAF(13), CREB5(4), CREBBP(2), CRKL(2), DAG1(2), EGR2(1), EGR4(1), FRS2(1), GNAQ(2), MAP1B(5), MAP2K4(2), MAP2K7(1), MAPK10(1), MAPK3(1), MAPK8(3), MAPK8IP1(3), MAPK8IP3(1), MAPK9(5), NTRK1(6), OPN1LW(1), PIK3C2G(3), PIK3CA(5), PIK3R1(1), PTPN11(1), RPS6KA3(1), SHC1(2), SRC(2), TH(1) 10057227 75 44 70 25 15 20 19 12 9 0 0.590 1.000 1.000 390 ST_INTERLEUKIN_4_PATHWAY Like IL-13, IL-4 is produced by Th2 cells on activation of the T cell antigen receptor, and by mast and basophil cells on activation of the IgE receptor. AKT1, AKT2, AKT3, CISH, GRB2, IARS, IL13RA1, IL2RG, IL4, IL4R, INPP5D, JAK1, JAK2, JAK3, NR0B2, PI3, PIK3CA, PPP1R13B, RPS6KB1, SERPINA4, SHC1, SOS1, SOS2, SRC, STAT6, TYK2 26 AKT2(1), AKT3(2), GRB2(3), IARS(3), IL4R(5), INPP5D(3), JAK1(5), JAK2(2), JAK3(3), PI3(1), PIK3CA(5), PPP1R13B(2), SERPINA4(7), SHC1(2), SOS1(9), SOS2(5), SRC(2), STAT6(1), TYK2(2) 7166079 63 44 62 20 6 17 17 14 9 0 0.637 1.000 1.000 391 HSA00310_LYSINE_DEGRADATION Genes involved in lysine degradation AADAT, AASDHPPT, AASS, ACAT1, ACAT2, AKR1B10, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, BBOX1, DLST, DOT1L, ECHS1, EHHADH, EHMT1, EHMT2, GCDH, HADH, HADHA, HSD17B10, HSD17B4, HSD3B7, NSD1, OGDH, OGDHL, PIPOX, PLOD1, PLOD2, PLOD3, RDH11, RDH12, RDH13, RDH14, SETD1A, SETD7, SETDB1, SHMT1, SHMT2, SPCS1, SPCS3, SUV39H1, SUV39H2, TMLHE 47 AASDHPPT(1), AASS(4), ACAT1(1), AKR1B10(3), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2), BBOX1(2), DLST(1), DOT1L(6), EHHADH(3), EHMT1(4), EHMT2(1), GCDH(1), HADH(2), HADHA(2), HSD3B7(2), NSD1(7), OGDHL(5), PLOD1(2), PLOD2(2), PLOD3(2), SETD1A(5), SETDB1(3), SHMT1(2), SHMT2(1), SPCS3(1), SUV39H1(1), SUV39H2(2), TMLHE(2) 11287242 82 43 82 27 16 22 22 11 9 2 0.495 1.000 1.000 392 TYROSINE_METABOLISM ABP1, ADH1A, ADH1A, ADH1B, ADH1C, ADH1B, ADH1C, ADH4, ADH6, ADH7, ADHFE1, ALDH1A3, ALDH3A1, ALDH3B1, ALDH3B2, AOC2, AOC3, AOX1, COMT, DBH, DCT, DDC, FAH, GOT1, GOT2, GSTZ1, HGD, HPD, MAOA, MAOB, PNMT, TAT, TH, TPO, TYR 32 ABP1(4), ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH6(4), ADH7(3), ADHFE1(2), ALDH1A3(1), ALDH3A1(1), ALDH3B2(3), AOC2(3), AOC3(2), AOX1(6), DCT(4), DDC(6), FAH(1), GOT1(2), GOT2(3), HGD(3), HPD(2), TAT(2), TH(1), TPO(9), TYR(6) 6165426 85 43 85 36 14 37 16 7 11 0 0.924 1.000 1.000 393 ALKPATHWAY Activin receptor-like kinase 3 (ALK3) is required during gestation for cardiac muscle development. ACVR1, APC, ATF2, AXIN1, BMP10, BMP2, BMP4, BMP5, BMP7, BMPR1A, BMPR2, CHRD, CTNNB1, DVL1, FZD1, GATA4, GSK3B, MADH1, MADH4, MADH5, MADH6, MAP3K7, MEF2C, MYL2, NKX2-5, NOG, NPPA, NPPB, RFC1, TCF1, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, TGFBR3, WNT1 32 ACVR1(2), APC(6), ATF2(2), AXIN1(2), BMP10(4), BMP2(1), BMP4(2), BMP5(3), BMP7(3), BMPR1A(1), BMPR2(2), CHRD(8), CTNNB1(9), FZD1(2), GATA4(2), GSK3B(1), MAP3K7(3), MEF2C(1), MYL2(2), NKX2-5(2), NPPA(1), RFC1(6), TGFB1(2), TGFB2(5), TGFB3(1), TGFBR1(2), TGFBR3(11), WNT1(3) 7077456 89 42 88 26 17 28 20 12 12 0 0.486 1.000 1.000 394 GLYCEROPHOSPHOLIPID_METABOLISM ACHE, AGPAT1, AGPAT2, AGPAT3, AGPAT4, AGPS, CDIPT, CDS1, CDS2, CHAT, CHKA, CHKB, CHKB, CPT1B, CLC, DGKA, DGKB, DGKD, DGKE, DGKG, DGKH, DGKQ, DGKZ, ETNK1, GNPAT, GPD1, GPD2, LCAT, LGALS13, LYPLA1, LYPLA2, LYPLA2, LYPLA2P1, LOC388499, LYPLA3, PAFAH1B1, PAFAH2, PCYT1A, PCYT1B, PEMT, PISD, PLA2G1B, PLA2G2A, PLA2G2E, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLCB2, PLCG1, PLCG2, PPAP2A, PPAP2B, PPAP2C 49 AGPAT1(1), AGPAT2(3), AGPAT3(2), AGPAT4(1), AGPS(2), CDIPT(1), CDS1(2), CDS2(2), CHAT(2), CHKB(2), CPT1B(3), DGKA(2), DGKB(8), DGKD(2), DGKE(3), DGKG(4), DGKZ(3), ETNK1(1), GNPAT(3), GPD1(1), GPD2(2), LCAT(1), LYPLA2(1), PAFAH2(1), PCYT1A(2), PCYT1B(1), PLA2G1B(1), PLA2G2A(3), PLA2G2E(1), PLA2G3(4), PLA2G4A(5), PLA2G6(1), PLCB2(4), PLCG1(4), PLCG2(4), PPAP2B(1) 9782457 84 42 84 27 16 16 25 16 11 0 0.590 1.000 1.000 395 LAIRPATHWAY The local acute inflammatory response is mediated by activated macrophages and mast cells or by complement activation. BDK, C3, C5, C6, C7, ICAM1, IL1A, IL6, IL8, ITGA4, ITGAL, ITGB1, ITGB2, SELP, SELPLG, TNF, VCAM1 16 C3(3), C5(1), C6(7), C7(14), IL1A(2), ITGA4(11), ITGAL(17), ITGB1(2), ITGB2(2), SELP(11), SELPLG(3), VCAM1(8) 4829244 81 42 80 29 13 26 19 14 9 0 0.876 1.000 1.000 396 OVARIAN_INFERTILITY_GENES ATM, BMPR1B, CCND2, CDK4, CDKN1B, CEBPB, DAZL, DMC1, EGR1, ESR2, FSHR, GJA4, INHA, LHCGR, MLH1, MSH5, NCOR1, NR5A1, NRIP1, PGR, PRLR, PTGER2, SMPD1, VDR, ZP2 25 ATM(14), BMPR1B(3), CDK4(2), CDKN1B(2), DMC1(1), ESR2(2), FSHR(11), LHCGR(3), MLH1(3), MSH5(2), NCOR1(8), NRIP1(2), PGR(5), PRLR(7), PTGER2(1), SMPD1(1), ZP2(2) 6797913 69 42 68 22 9 20 17 8 15 0 0.692 1.000 1.000 397 RHOPATHWAY RhoA is a G protein whose active form stabilizes actin structures such as focal adhesions and activates Rock1, which phosphorylates myosin light chains. ACTR2, ACTR3, ARHA, ARHGAP1, ARHGAP4, ARHGAP5, ARHGAP6, ARHGEF1, ARHGEF11, ARHGEF5, ARPC1A, ARPC1B, ARPC2, ARPC3, ARPC4, BAIAP2, CFL1, DIAPH1, GSN, LIMK1, MYL2, MYLK, OPHN1, PFN1, PIP5K1A, PIP5K1B, PPP1R12B, ROCK1, SRC, TLN1, VCL 30 ACTR2(1), ACTR3(1), ARHGAP1(1), ARHGAP4(2), ARHGAP5(4), ARHGAP6(5), ARHGEF1(1), ARHGEF11(6), ARHGEF5(4), ARPC1B(1), ARPC2(1), ARPC3(1), BAIAP2(2), DIAPH1(3), GSN(2), MYL2(2), MYLK(10), OPHN1(3), PIP5K1A(5), PIP5K1B(5), PPP1R12B(4), ROCK1(7), SRC(2), TLN1(9), VCL(2) 8861397 84 42 83 24 22 21 22 9 10 0 0.375 1.000 1.000 398 ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY The phosphoinositide-3 kinase pathway produces the lipid second messenger PIP3 and regulates cell growth, survival, and movement. A1BG, AKT1, AKT2, AKT3, BAD, BTK, CDKN2A, CSL4, DAF, DAPP1, FOXO1A, GRB2, GSK3A, GSK3B, IARS, IGFBP1, INPP5D, P14, PDK1, PIK3CA, PPP1R13B, PSCD3, PTEN, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KB1, SFN, SHC1, SOS1, SOS2, TEC, YWHAB, YWHAE, YWHAG, YWHAH, YWHAQ, YWHAZ 33 A1BG(1), AKT2(1), AKT3(2), BTK(7), CDKN2A(7), DAPP1(1), GRB2(3), GSK3B(1), IARS(3), IGFBP1(2), INPP5D(3), PDK1(2), PIK3CA(5), PPP1R13B(2), PTEN(3), RPS6KA2(2), RPS6KA3(1), SHC1(2), SOS1(9), SOS2(5), TEC(4), YWHAG(1) 7023276 67 42 65 26 6 14 22 14 11 0 0.931 1.000 1.000 399 GLYCINE_SERINE_AND_THREONINE_METABOLISM ABP1, AGXT, AGXT2, ALAS1, ALAS2, AMT, AOC2, AOC3, ATP6V0C, SHMT1, BHMT, CBS, CHDH, CHKA, CHKB, CHKB, CPT1B, CTH, DAO, DLD, DMGDH, GAMT, GARS, GATM, GCAT, GLDC, MAOA, MAOB, PEMT, PISD, PLCB2, PLCG1, PLCG2, PSPH, SARDH, SARS, SHMT1, SHMT2, TARS 37 ABP1(4), AGXT(2), AGXT2(6), ALAS1(3), AMT(2), AOC2(3), AOC3(2), BHMT(4), CBS(1), CHKB(2), CPT1B(3), DAO(1), DLD(3), DMGDH(2), GARS(3), GATM(3), GCAT(2), GLDC(3), PLCB2(4), PLCG1(4), PLCG2(4), PSPH(3), SARDH(2), SHMT1(2), SHMT2(1), TARS(3) 8219493 72 41 72 23 17 22 20 10 3 0 0.508 1.000 1.000 400 GPCRDB_CLASS_C_METABOTROPIC_GLUTAMATE_PHEROMONE CASR, GABBR1, GPCR5A, GPR51, GPRC5A, GPRC5B, GPRC5C, GPRC5D, GRM1, GRM2, GRM3, GRM4, GRM5, GRM7, GRM8 13 CASR(10), GABBR1(3), GPRC5A(1), GPRC5B(4), GRM1(14), GRM2(3), GRM3(4), GRM4(3), GRM5(9), GRM7(8), GRM8(8) 4043892 67 41 67 28 11 17 23 13 3 0 0.821 1.000 1.000 401 HSA00071_FATTY_ACID_METABOLISM Genes involved in fatty acid metabolism ACAA1, ACAA2, ACADL, ACADM, ACADS, ACADSB, ACADVL, ACAT1, ACAT2, ACOX1, ACOX3, ACSL1, ACSL3, ACSL4, ACSL5, ACSL6, ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, CPT1A, CPT1B, CPT1C, CPT2, CYP4A11, CYP4A22, DCI, ECHS1, EHHADH, GCDH, HADH, HADHA, HADHB, HSD17B10, HSD17B4, PECI 47 ACAA2(3), ACADM(3), ACAT1(1), ACOX1(2), ACOX3(4), ACSL1(4), ACSL3(1), ACSL4(1), ACSL5(1), ACSL6(6), ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH5(3), ADH6(4), ADH7(3), ADHFE1(2), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2), CPT1A(5), CPT1B(3), CPT1C(2), CPT2(2), CYP4A11(3), DCI(2), EHHADH(3), GCDH(1), HADH(2), HADHA(2), HADHB(2) 9487305 96 41 96 33 15 41 17 11 11 1 0.666 1.000 1.000 402 HSA00251_GLUTAMATE_METABOLISM Genes involved in glutamate metabolism ABAT, ADC, ALDH4A1, ALDH5A1, CAD, CPS1, EARS2, EPRS, GAD1, GAD2, GCLC, GCLM, GFPT1, GFPT2, GLS, GLS2, GLUD1, GLUD2, GLUL, GMPS, GNPNAT1, GOT1, GOT2, GPT, GPT2, GSR, GSS, NADSYN1, NAGK, PPAT, QARS 31 ABAT(1), ALDH4A1(1), ALDH5A1(2), CAD(9), CPS1(23), EARS2(1), EPRS(9), GAD1(4), GAD2(5), GCLC(6), GCLM(1), GFPT1(3), GFPT2(1), GLS(1), GLS2(2), GLUD1(3), GLUD2(3), GMPS(5), GOT1(2), GOT2(3), GPT2(2), GSR(1), GSS(2), NAGK(1), PPAT(3), QARS(2) 7674339 96 41 96 28 19 33 22 11 10 1 0.502 1.000 1.000 403 GAMMA_HEXACHLOROCYCLOHEXANE_DEGRADATION ACP1, ACP2, ACP5, ACPP, ACPT, ALPI, ALPL, ALPP, ALPP, ALPPL2, ALPPL2, CYP19A1, CYP1A1, CYP1A2, CYP2A6, CYP2A6, CYP2A7, CYP2A7P1, CYP2A13, CYP2B6, CYP2C18, CYP2C19, CYP2C19, CYP2C9, CYP2C8, CYP2C9, CYP2D6, CYP2E1, CYP2F1, CYP2J2, CYP3A4, CYP3A5, CYP3A7, CYP4B1, CYP4F8, CYP51A1, PON1 31 ACP1(1), ACP2(1), ACP5(2), ACPP(6), ALPI(2), ALPL(2), ALPP(3), ALPPL2(2), CYP19A1(2), CYP1A1(3), CYP1A2(1), CYP2A13(3), CYP2A6(2), CYP2A7(2), CYP2B6(5), CYP2C18(2), CYP2C19(5), CYP2C8(2), CYP2C9(2), CYP2E1(3), CYP2F1(2), CYP2J2(8), CYP3A4(1), CYP3A7(3), CYP4B1(5), CYP4F8(3), CYP51A1(3), PON1(1) 5697027 77 40 77 30 13 19 21 9 14 1 0.713 1.000 1.000 404 HSA00040_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS Genes involved in pentose and glucuronate interconversions AKR1B1, DCXR, GUSB, RPE, UGDH, UGP2, UGT1A1, UGT1A10, UGT1A3, UGT1A4, UGT1A5, UGT1A6, UGT1A7, UGT1A8, UGT1A9, UGT2A1, UGT2A3, UGT2B10, UGT2B11, UGT2B15, UGT2B17, UGT2B28, UGT2B4, UGT2B7, XYLB 25 AKR1B1(1), DCXR(1), GUSB(2), RPE(1), UGDH(3), UGP2(1), UGT1A1(3), UGT1A10(3), UGT1A3(3), UGT1A4(1), UGT1A5(1), UGT1A6(2), UGT1A7(2), UGT1A9(4), UGT2A1(3), UGT2A3(4), UGT2B10(11), UGT2B11(9), UGT2B15(4), UGT2B28(6), UGT2B4(6), UGT2B7(5), XYLB(3) 5334279 79 40 78 29 8 33 17 12 9 0 0.885 1.000 1.000 405 HSA00190_OXIDATIVE_PHOSPHORYLATION Genes involved in oxidative phosphorylation ATP12A, ATP4A, ATP4B, ATP5A1, ATP5B, ATP5C1, ATP5D, ATP5E, ATP5F1, ATP5G1, ATP5G2, ATP5G3, ATP5H, ATP5I, ATP5J, ATP5J2, ATP5L, ATP5O, ATP6, ATP6AP1, ATP6V0A1, ATP6V0A2, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0D1, ATP6V0D2, ATP6V0E1, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1E2, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H, ATP8, COX1, COX10, COX15, COX17, COX2, COX3, COX4I1, COX4I2, COX5A, COX5B, COX6A1, COX6A2, COX6B1, COX6B2, COX6C, COX7A1, COX7A2, COX7B, COX7B2, COX7C, COX8A, COX8C, CYC1, CYTB, LHPP, ND1, ND2, ND3, ND4, ND4L, ND5, ND6, NDUFA1, NDUFA10, NDUFA11, NDUFA12, NDUFA13, NDUFA2, NDUFA3, NDUFA4, NDUFA4L2, NDUFA5, NDUFA6, NDUFA7, NDUFA8, NDUFA9, NDUFAB1, NDUFB1, NDUFB10, NDUFB11, NDUFB2, NDUFB3, NDUFB4, NDUFB5, NDUFB6, NDUFB7, NDUFB8, NDUFB9, NDUFC1, NDUFC2, NDUFS1, NDUFS2, NDUFS3, NDUFS4, NDUFS5, NDUFS6, NDUFS7, NDUFS8, NDUFV1, NDUFV2, NDUFV3, PPA1, PPA2, SDHA, SDHB, SDHC, SDHD, TCIRG1, UCRC, UQCR, UQCRB, UQCRC1, UQCRC2, UQCRFS1, UQCRH, UQCRQ 113 ATP12A(4), ATP4A(4), ATP4B(1), ATP5A1(2), ATP5B(1), ATP5C1(2), ATP5F1(1), ATP5G3(1), ATP5L(2), ATP6V0A1(1), ATP6V0A4(4), ATP6V0B(1), ATP6V0D1(1), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(2), ATP6V1C1(3), ATP6V1C2(2), ATP6V1D(1), ATP6V1E2(1), ATP6V1G1(1), ATP6V1H(2), COX15(2), COX4I1(1), COX5B(1), COX6B1(1), COX6B2(1), COX8A(1), CYC1(1), NDUFA10(1), NDUFA11(1), NDUFA12(2), NDUFA13(2), NDUFA4(1), NDUFA8(2), NDUFA9(3), NDUFB11(1), NDUFB2(3), NDUFB4(1), NDUFB5(2), NDUFB9(1), NDUFC2(1), NDUFS1(4), NDUFS2(3), NDUFS3(1), NDUFS6(1), NDUFS8(1), NDUFV1(2), PPA1(1), SDHA(5), SDHD(1), UQCRB(2), UQCRC2(2), UQCRFS1(2), UQCRQ(1) 10811361 99 40 99 44 27 23 25 10 14 0 0.957 1.000 1.000 406 HSA00280_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION Genes involved in valine, leucine and isoleucine degradation ABAT, ACAA1, ACAA2, ACADM, ACADS, ACAT1, ACAT2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH6A1, ALDH7A1, ALDH9A1, AOX1, AUH, BCAT1, BCAT2, BCKDHA, BCKDHB, DBT, DLD, ECHS1, EHHADH, HADH, HADHA, HADHB, HIBADH, HIBCH, HMGCL, HMGCS1, HMGCS2, HSD17B10, HSD17B4, IVD, MCCC1, MCCC2, MCEE, MUT, OXCT1, OXCT2, PCCA, PCCB 44 ABAT(1), ACAA2(3), ACADM(3), ACAT1(1), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2), AOX1(6), AUH(1), BCKDHB(4), DBT(8), DLD(3), EHHADH(3), HADH(2), HADHA(2), HADHB(2), HIBADH(1), HIBCH(3), HMGCS1(2), HMGCS2(5), MCCC1(2), MCCC2(2), MUT(4), OXCT1(4), PCCA(4), PCCB(1) 8341011 81 40 81 25 7 32 15 9 16 2 0.580 1.000 1.000 407 HSA00510_N_GLYCAN_BIOSYNTHESIS Genes involved in N-glycan biosynthesis ALG1, ALG10, ALG10B, ALG11, ALG12, ALG13, ALG14, ALG2, ALG3, ALG5, ALG6, ALG8, ALG9, B4GALT1, B4GALT2, B4GALT3, DAD1, DDOST, DHDDS, DOLPP1, DPAGT1, DPM1, FUT8, GANAB, GCS1, MAN1A1, MAN1A2, MAN1B1, MAN1C1, MAN2A1, MGAT1, MGAT2, MGAT3, MGAT4A, MGAT4B, MGAT5, MGAT5B, RFT1, RPN1, RPN2, ST6GAL1, STT3B 41 ALG10(5), ALG10B(3), ALG12(2), ALG13(5), ALG14(1), ALG2(4), ALG3(3), ALG8(1), ALG9(2), B4GALT1(1), B4GALT2(2), B4GALT3(1), DHDDS(1), DOLPP1(3), DPAGT1(1), FUT8(4), GANAB(3), MAN1A2(8), MAN1C1(2), MAN2A1(7), MGAT1(1), MGAT3(3), MGAT4A(2), MGAT4B(1), MGAT5(2), MGAT5B(1), RFT1(2), RPN2(4), STT3B(1) 8269803 76 40 76 28 15 25 21 6 9 0 0.821 1.000 1.000 408 MONOAMINE_GPCRS ADRA1A, ADRA1B, ADRA1D, ADRA2A, ADRA2C, ADRB1, ADRB2, ADRB3, CHRM1, CHRM2, CHRM3, CHRM4, CHRM5, DRD1, DRD2, DRD3, DRD4, DRD5, HRH1, HRH2, HTR1A, HTR1B, HTR1D, HTR1E, HTR1F, HTR2A, HTR2B, HTR2C, HTR4, HTR5A, HTR6, HTR7, HTR7, LOC93164 32 ADRA1A(2), ADRA1D(2), ADRA2A(1), ADRA2C(1), ADRB3(1), CHRM1(1), CHRM2(4), CHRM3(4), CHRM4(2), DRD1(2), DRD2(7), DRD3(7), DRD5(3), HRH1(4), HRH2(2), HTR1A(8), HTR1B(2), HTR1E(4), HTR1F(3), HTR2A(2), HTR2C(5), HTR5A(6), HTR6(3) 4967274 76 40 76 36 5 31 27 8 5 0 0.880 1.000 1.000 409 ST_WNT_BETA_CATENIN_PATHWAY Beta-catenin is degraded in the absence of Wnt signaling; when extracellular Wnt binds Frizzled receptors, beta-catenin accumulates in the nucleus and may promote cell survival. AKT1, AKT2, AKT3, ANKRD6, APC, AXIN1, AXIN2, C22orf2, CER1, CSNK1A1, CTNNB1, DACT1, DKK1, DKK2, DKK3, DKK4, DVL1, FRAT1, FSTL1, GSK3A, GSK3B, IDAX, LAMR1, LRP1, MVP, NKD1, NKD2, PIN1, PSEN1, PTPRA, SENP2, SFRP1, TSHB, WIF1 30 AKT2(1), AKT3(2), APC(6), AXIN1(2), AXIN2(2), CER1(1), CSNK1A1(1), CTNNB1(9), DACT1(6), DKK1(1), DKK2(3), DKK4(1), FSTL1(2), GSK3B(1), LRP1(17), MVP(1), NKD1(4), NKD2(2), PSEN1(1), PTPRA(2), SENP2(3) 7845135 68 40 67 22 9 20 17 10 12 0 0.729 1.000 1.000 410 APOPTOSIS_KEGG APAF1, BAD, BAX, BCL2, BCL2A1, BCL2L1, BCL2L2, BOK, CASP1, CASP1, COPl, CASP10, CASP2, CASP3, CASP4, CASP6, CASP7, CASP8, CASP9, CD40, CD40LG, CRADD, CYCS, DAXX, DFFA, DFFB, FADD, FAS, FASLG, HRK, IKBKE, LTA, MCL1, NFKB1, NFKBIA, NGFB, NGFR, NR3C1, NTRK1, PTPN13, RIPK1, SFRS2IP, TFG, TNF, TNFRSF1A, TNFRSF1B, TRADD, TRAF1, TRAF2, TRAF3, TRAF6 47 APAF1(4), BAX(1), BCL2(1), CASP1(2), CASP10(3), CASP2(2), CASP3(4), CASP4(1), CASP8(3), CASP9(2), CD40LG(4), DAXX(2), DFFA(3), FAS(2), FASLG(2), IKBKE(2), MCL1(1), NFKB1(2), NGFR(2), NR3C1(1), NTRK1(6), PTPN13(7), RIPK1(3), SFRS2IP(10), TNFRSF1B(1), TRAF3(1), TRAF6(3) 8549346 75 39 74 26 12 29 15 10 9 0 0.826 1.000 1.000 411 CARM_ERPATHWAY Methyltransferase CARM1 methylates CBP and co-activates estrogen receptors via Grip1. BRCA1, CARM1, CCND1, CREBBP, EP300, ERCC3, ESR1, GRIP1, GTF2A1, GTF2E1, GTF2F1, HDAC1, HDAC2, HDAC3, HDAC4, HDAC5, HDAC6, HIST2H3C, MEF2C, NCOR2, NR0B1, NRIP1, PELP1, POLR2A, PPARBP, PPARGC1, REA, SHARP, SRA1, TBP 25 BRCA1(6), CARM1(3), CCND1(2), CREBBP(2), EP300(1), ERCC3(4), GRIP1(5), GTF2A1(3), GTF2E1(2), GTF2F1(1), HDAC1(1), HDAC2(6), HDAC3(1), HDAC4(10), HDAC5(2), HDAC6(4), MEF2C(1), NCOR2(6), NR0B1(1), NRIP1(2), PELP1(2), POLR2A(6) 8937765 71 39 70 20 17 20 21 9 4 0 0.347 1.000 1.000 412 HSA00650_BUTANOATE_METABOLISM Genes involved in butanoate metabolism AACS, AADAC, ABAT, ACADS, ACAT1, ACAT2, ACSM1, AKR1B10, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH5A1, ALDH7A1, ALDH9A1, BDH1, BDH2, DDHD1, ECHS1, EHHADH, GAD1, GAD2, HADH, HADHA, HMGCL, HMGCS1, HMGCS2, HSD17B10, HSD17B4, HSD3B7, ILVBL, L2HGDH, OXCT1, OXCT2, PDHA1, PDHA2, PDHB, PLA1A, PPME1, PRDX6, RDH11, RDH12, RDH13, RDH14 45 AACS(5), ABAT(1), ACAT1(1), ACSM1(3), AKR1B10(3), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH5A1(2), ALDH7A1(1), ALDH9A1(2), BDH2(1), DDHD1(3), EHHADH(3), GAD1(4), GAD2(5), HADH(2), HADHA(2), HMGCS1(2), HMGCS2(5), HSD3B7(2), OXCT1(4), PDHA1(1), PDHA2(8), PLA1A(4), PPME1(2), PRDX6(1) 7857777 78 39 78 23 14 28 15 10 9 2 0.358 1.000 1.000 413 HSA05110_CHOLERA_INFECTION Genes involved in cholera - infection ACTG1, ACTG2, ADCY3, ADCY9, AK1, ARF1, ARF3, ARF4, ARF5, ARF6, ARL4D, ATP6V0A1, ATP6V0A2, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0D1, ATP6V0D2, ATP6V0E1, ATP6V1A, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1E2, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H, ERO1L, GNAS, PDIA4, PLCG1, PLCG2, PRKCA, SEC61A1, SEC61A2, SEC61B, SEC61G, TRIM23 41 ACTG1(2), ACTG2(3), ADCY3(2), ADCY9(1), ARF3(1), ARF4(2), ARF5(1), ARL4D(2), ATP6V0A1(1), ATP6V0A4(4), ATP6V0B(1), ATP6V0D1(1), ATP6V1A(4), ATP6V1C1(3), ATP6V1C2(2), ATP6V1D(1), ATP6V1E2(1), ATP6V1G1(1), ATP6V1H(2), ERO1L(1), GNAS(3), PDIA4(2), PLCG1(4), PLCG2(4), PRKCA(7), SEC61A1(4), SEC61A2(3), SEC61G(1), TRIM23(1) 7158339 65 39 65 30 17 20 18 6 4 0 0.959 1.000 1.000 414 INTEGRINPATHWAY Integrins are cell surface receptors commonly present at focal adhensions that interact with the extracellular matrix and transduce extracellular signaling. ACTA1, ACTN1, ACTN2, ACTN3, ARHA, BCAR1, BCR, CAPN1, CAPNS1, CAPNS2, CAV1, CRKL, CSK, FYN, GRB2, GRF2, HRAS, ITGA1, ITGB1, JUN, MAP2K1, MAP2K2, MAPK1, MAPK3, MAPK8, PPP1R12B, PTK2, PXN, RAF1, RAP1A, ROCK1, SHC1, SOS1, SRC, TLN1, TNS, VCL, ZYX 35 ACTN2(14), ACTN3(2), BCAR1(1), BCR(3), CRKL(2), FYN(2), GRB2(3), HRAS(1), ITGA1(5), ITGB1(2), MAP2K1(4), MAPK3(1), MAPK8(3), PPP1R12B(4), PTK2(7), RAF1(2), RAP1A(1), ROCK1(7), SHC1(2), SOS1(9), SRC(2), TLN1(9), VCL(2), ZYX(2) 9153066 90 39 90 37 22 27 10 22 9 0 0.925 1.000 1.000 415 HSA00120_BILE_ACID_BIOSYNTHESIS Genes involved in bile acid biosynthesis ACAA1, ACAA2, ACAD8, ACAD9, ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, AKR1B10, AKR1C4, AKR1D1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, BAAT, CEL, CYP27A1, CYP7A1, HADHB, HSD3B7, LIPA, RDH11, RDH12, RDH13, RDH14, SLC27A5, SOAT1, SOAT2, SRD5A1, SRD5A2 38 ACAA2(3), ACAD8(1), ACAD9(1), ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH5(3), ADH6(4), ADH7(3), ADHFE1(2), AKR1B10(3), AKR1C4(1), AKR1D1(2), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2), BAAT(3), CEL(3), CYP27A1(3), CYP7A1(4), HADHB(2), HSD3B7(2), LIPA(1), SLC27A5(1), SOAT1(3), SRD5A1(3) 6158331 79 38 79 31 8 37 17 7 9 1 0.858 1.000 1.000 416 HSA00260_GLYCINE_SERINE_AND_THREONINE_METABOLISM Genes involved in glycine, serine and threonine metabolism ABP1, AGXT, AGXT2, AKR1B10, ALAS1, ALAS2, AMT, AOC2, AOC3, BHMT, CBS, CHDH, CHKA, CHKB, CTH, DAO, DLD, DMGDH, GAMT, GARS, GATM, GCAT, GLDC, GNMT, HSD3B7, MAOA, MAOB, PEMT, PHGDH, PIPOX, PISD, PSAT1, PSPH, RDH11, RDH12, RDH13, RDH14, SARDH, SARS, SARS2, SDS, SHMT1, SHMT2, TARS, TARS2 45 ABP1(4), AGXT(2), AGXT2(6), AKR1B10(3), ALAS1(3), AMT(2), AOC2(3), AOC3(2), BHMT(4), CBS(1), CHKB(2), DAO(1), DLD(3), DMGDH(2), GARS(3), GATM(3), GCAT(2), GLDC(3), HSD3B7(2), PSAT1(1), PSPH(3), SARDH(2), SHMT1(2), SHMT2(1), TARS(3), TARS2(5) 8383710 68 38 68 25 14 24 17 9 4 0 0.730 1.000 1.000 417 HSA00330_ARGININE_AND_PROLINE_METABOLISM Genes involved in arginine and proline metabolism ALDH4A1, ARG1, ARG2, ASL, ASS1, CKB, CKM, CKMT1A, CKMT1B, CKMT2, CPS1, DAO, EPRS, GAMT, GATM, GLUD1, GLUD2, GOT1, GOT2, LAP3, NOS1, NOS2A, NOS3, OAT, OTC, P4HA1, P4HA2, P4HA3, PARS2, PRODH, PYCR1, PYCR2, PYCRL, RARS, RARS2 34 ALDH4A1(1), ARG1(1), ASL(2), ASS1(3), CKM(1), CKMT1A(1), CKMT1B(1), CKMT2(1), CPS1(23), DAO(1), EPRS(9), GATM(3), GLUD1(3), GLUD2(3), GOT1(2), GOT2(3), LAP3(1), NOS1(5), NOS3(1), OAT(1), OTC(2), P4HA1(2), P4HA3(1), RARS(4), RARS2(1) 6970386 76 38 76 34 13 26 21 7 9 0 0.979 1.000 1.000 418 HSA04740_OLFACTORY_TRANSDUCTION Genes involved in olfactory transduction ADCY3, ADRBK2, ARRB2, CALM1, CALM2, CALM3, CALML3, CALML6, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CLCA1, CLCA2, CLCA4, CNGA3, CNGA4, CNGB1, GNAL, GUCA1A, GUCA1B, GUCA1C, PDC, PDE1C, PRKACA, PRKACB, PRKACG, PRKG1, PRKG2, PRKX, PRKY 30 ADCY3(2), ADRBK2(1), ARRB2(1), CALM1(1), CALML3(2), CAMK2A(1), CAMK2D(1), CAMK2G(2), CLCA1(2), CLCA2(4), CLCA4(5), CNGA3(5), CNGA4(3), CNGB1(1), GUCA1A(1), GUCA1B(1), GUCA1C(2), PDC(1), PDE1C(11), PRKACB(2), PRKACG(1), PRKG1(1), PRKG2(4), PRKX(3) 5913489 58 38 58 17 14 18 15 5 6 0 0.447 1.000 1.000 419 OXIDATIVE_PHOSPHORYLATION ATP12A, ATP4B, ATP5E, ATP5O, ATP6AP1, ATP6V0A1, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0C, SHMT1, ATP6V0D1, ATP6V0E, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H, ATP7A, ATP7B, COX10, COX4I1, COX5A, COX5B, COX6A1, COX6A2, COX6B1, COX6C, COX7A1, COX7A2, COX7B, COX7C, COX8A, NDUFA1, NDUFA10, NDUFA11, NDUFA4, NDUFA5, NDUFA8, NDUFB2, NDUFB4, NDUFB5, NDUFB6, NDUFB7, NDUFS1, NDUFS2, NDUFV1, NDUFV2, PP, PPA2, SDHA, SDHA, SDHAL2, SDHB, UQCRB, UQCRC1, UQCRFS1, UQCRH 60 ATP12A(4), ATP4B(1), ATP6V0A1(1), ATP6V0A4(4), ATP6V0B(1), ATP6V0D1(1), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(2), ATP6V1C1(3), ATP6V1C2(2), ATP6V1D(1), ATP6V1G1(1), ATP6V1H(2), ATP7A(11), ATP7B(6), COX4I1(1), COX5B(1), COX6B1(1), COX8A(1), NDUFA10(1), NDUFA11(1), NDUFA4(1), NDUFA8(2), NDUFB2(3), NDUFB4(1), NDUFB5(2), NDUFS1(4), NDUFS2(3), NDUFV1(2), SDHA(5), SHMT1(2), UQCRB(2), UQCRFS1(2) 7412211 82 38 82 37 22 25 15 8 12 0 0.965 1.000 1.000 420 RAC1PATHWAY Rac-1 is a Rho family G protein that stimulates formation of actin-dependent structures such as filopodia and lamellopodia. ARFIP2, CDK5, CDK5R1, CFL1, CHN1, LIMK1, MAP3K1, MYL2, MYLK, NCF2, PAK1, PDGFRA, PIK3CA, PIK3R1, PLD1, PPP1R12B, RAC1, RALBP1, RPS6KB1, TRIO, VAV1, WASF1 22 ARFIP2(1), CDK5(1), CHN1(1), MAP3K1(3), MYL2(2), MYLK(10), NCF2(2), PAK1(5), PDGFRA(7), PIK3CA(5), PIK3R1(1), PLD1(7), PPP1R12B(4), RALBP1(1), TRIO(9), VAV1(1), WASF1(4) 6780885 64 38 62 20 9 19 19 5 12 0 0.605 1.000 1.000 421 ST_ERK1_ERK2_MAPK_PATHWAY The Erk1 and Erk2 MAP kinase pathways are regulated by Raf, Mos, and Tpl-2. ARAF1, ATF1, BAD, BRAF, COPEB, CREB1, CREB3, CREB5, DUSP4, DUSP6, DUSP9, EEF2K, EIF4E, GRB2, HTATIP, MAP2K1, MAP2K2, MAP3K8, MAPK1, MAPK3, MKNK1, MKNK2, MOS, NFKB1, RAP1A, RPS6KA1, RPS6KA2, RPS6KA3, SHC1, SOS1, SOS2, TRAF3 29 BRAF(13), CREB5(4), DUSP6(1), EEF2K(1), EIF4E(2), GRB2(3), MAP2K1(4), MAP3K8(1), MAPK3(1), MKNK1(1), NFKB1(2), RAP1A(1), RPS6KA2(2), RPS6KA3(1), SHC1(2), SOS1(9), SOS2(5), TRAF3(1) 5751078 54 38 50 17 7 15 13 12 7 0 0.584 1.000 1.000 422 TNFR1PATHWAY Tumor necrosis factor alpha binds to its receptor TNFR1 and induces caspase-dependent apoptosis. ADPRT, ARHGDIB, BAG4, CASP2, CASP3, CASP8, CRADD, DFFA, DFFB, FADD, JUN, LMNA, LMNB1, LMNB2, MADD, MAP2K4, MAP3K1, MAP3K7, MAPK8, PAK1, PAK2, PRKDC, RB1, RIPK1, SPTAN1, TNF, TNFRSF1A, TRADD, TRAF2 28 CASP2(2), CASP3(4), CASP8(3), DFFA(3), LMNB1(1), LMNB2(1), MADD(8), MAP2K4(2), MAP3K1(3), MAP3K7(3), MAPK8(3), PAK1(5), PAK2(3), PRKDC(14), RB1(5), RIPK1(3), SPTAN1(7) 7662600 70 38 70 18 20 14 17 6 13 0 0.295 1.000 1.000 423 ECMPATHWAY Extracellular matrix induces integrin-mediated FAK phosphorylation in epithelial cells, leading to PI3 and MAP kinase activation and actin reorganization. ARHA, ARHGAP5, DIAPH1, FYN, GSN, HRAS, ITGA1, ITGB1, MAP2K1, MAPK1, MAPK3, MYL2, MYLK, PFN1, PIK3CA, PIK3R1, PTK2, PXN, RAF1, ROCK1, SHC1, SRC, TLN1 22 ARHGAP5(4), DIAPH1(3), FYN(2), GSN(2), HRAS(1), ITGA1(5), ITGB1(2), MAP2K1(4), MAPK3(1), MYL2(2), MYLK(10), PIK3CA(5), PIK3R1(1), PTK2(7), RAF1(2), ROCK1(7), SHC1(2), SRC(2), TLN1(9) 7237803 71 37 69 22 15 20 11 16 9 0 0.619 1.000 1.000 424 EDG1PATHWAY The lipid S1P is an EDG1 ligand promoting chemotaxis via Rac1 and cell survival and proliferation via ERK activation. ADCY1, AKT1, ARHA, ASAH1, EDG1, GNAI1, GNB1, GNGT1, ITGAV, ITGB3, MAPK1, MAPK3, PDGFA, PDGFRA, PIK3CA, PIK3R1, PLCB1, PRKCA, PRKCB1, PTK2, RAC1, SKIP, SMPD1, SMPD2, SPHK1, SRC 22 ADCY1(8), ASAH1(2), GNAI1(1), GNB1(1), GNGT1(1), ITGAV(5), ITGB3(2), MAPK3(1), PDGFA(6), PDGFRA(7), PIK3CA(5), PIK3R1(1), PLCB1(9), PRKCA(7), PTK2(7), SMPD1(1), SMPD2(1), SRC(2) 5309640 67 37 66 20 12 26 16 5 8 0 0.557 1.000 1.000 425 EXTRINSICPATHWAY The extrinsic prothrombin activation pathway requires the release of thromboplastin from damaged tissues to activate the blood clotting cascade. F10, F2, F2R, F3, F5, F7, FGA, FGB, FGG, PROC, PROS1, SERPINC1, TFPI 13 F10(1), F2(5), F2R(2), F3(4), F5(17), F7(2), FGA(2), FGB(10), FGG(2), PROC(2), PROS1(10), SERPINC1(5), TFPI(1) 3168627 63 37 63 19 8 22 16 6 10 1 0.706 1.000 1.000 426 GHPATHWAY Growth hormone receptors dimerize on ligand binding and activate the JAK2 protein kinase. GH1, GHR, GRB2, HRAS, INS, INSR, IRS1, JAK2, MAP2K1, MAPK1, MAPK3, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, PTPN6, RAF1, RPS6KA1, SHC1, SLC2A4, SOCS1, SOS1, SRF, STAT5A, STAT5B, TCF1 25 GH1(2), GHR(1), GRB2(3), HRAS(1), INSR(1), IRS1(12), JAK2(2), MAP2K1(4), MAPK3(1), PIK3CA(5), PIK3R1(1), PLCG1(4), PRKCA(7), PTPN6(2), RAF1(2), SHC1(2), SOS1(9), STAT5A(2), STAT5B(3) 6398400 64 37 63 22 16 13 16 13 6 0 0.590 1.000 1.000 427 HSA01032_GLYCAN_STRUCTURES_DEGRADATION Genes involved in degradation of glycan structures AGA, ARSB, FLJ21865, FUCA1, FUCA2, GALNS, GBA, GLB1, GNS, GUSB, HEXA, HEXB, HGSNAT, HPSE, HPSE2, HYAL1, HYAL2, IDS, IDUA, LCT, MAN2B1, MAN2B2, MAN2C1, MANBA, NAGLU, NEU1, NEU2, NEU3, NEU4, SPAM1 29 AGA(1), ARSB(1), FUCA1(1), FUCA2(1), GBA(3), GUSB(2), HEXA(1), HGSNAT(2), HPSE2(4), HYAL1(1), IDS(2), IDUA(1), LCT(12), MAN2B1(1), MAN2B2(3), MAN2C1(3), MANBA(4), NAGLU(1), NEU3(1), NEU4(5), SPAM1(4) 6730833 54 37 54 22 8 18 16 6 6 0 0.856 1.000 1.000 428 SIG_IL4RECEPTOR_IN_B_LYPHOCYTES Genes related to IL4 rceptor signaling in B lymphocytes AKT1, AKT2, AKT3, BAD, BCL2, GRB2, GSK3A, GSK3B, IL4R, IRS1, IRS2, JAK1, JAK3, MAP4K1, MAPK1, MAPK3, PDK1, PIK3CA, PIK3CD, PIK3R1, PPP1R13B, RAF1, SHC1, SOCS1, SOS1, SOS2, STAT6 27 AKT2(1), AKT3(2), BCL2(1), GRB2(3), GSK3B(1), IL4R(5), IRS1(12), IRS2(2), JAK1(5), JAK3(3), MAP4K1(2), MAPK3(1), PDK1(2), PIK3CA(5), PIK3R1(1), PPP1R13B(2), RAF1(2), SHC1(2), SOS1(9), SOS2(5), STAT6(1) 7078875 67 37 66 23 12 13 20 14 8 0 0.613 1.000 1.000 429 ANDROGEN_AND_ESTROGEN_METABOLISM AKR1C4, AKR1D1, ARSB, ARSD, ARSE, CYP11B1, CYP11B2, HSD11B1, HSD11B2, HSD17B2, HSD17B3, HSD17B8, HSD3B1, HSD3B2, SRD5A1, SRD5A2, STS, SULT1E1, SULT2A1, UGT1A10, UGT1A10, UGT1A8, UGT1A7, UGT1A6, UGT1A5, UGT1A9, UGT1A4, UGT1A1, UGT1A3, UGT1A6, UGT1A8, UGT1A9, UGT2B15, UGT2B4 30 AKR1C4(1), AKR1D1(2), ARSB(1), ARSD(2), CYP11B1(3), CYP11B2(6), HSD11B1(2), HSD11B2(1), HSD17B2(1), HSD3B1(7), HSD3B2(12), SRD5A1(3), STS(3), SULT2A1(1), UGT1A1(3), UGT1A10(3), UGT1A3(3), UGT1A4(1), UGT1A5(1), UGT1A6(2), UGT1A7(2), UGT1A9(4), UGT2B15(4), UGT2B4(6) 5322411 74 36 73 29 8 30 16 12 8 0 0.889 1.000 1.000 430 FASPATHWAY Binding of the Fas ligand to the Fas receptor induces caspase activation and consequent apoptosis in the Fas-expressing cell. ADPRT, ARHGDIB, CASP10, CASP3, CASP6, CASP7, CASP8, CFLAR, DAXX, DFFA, DFFB, FADD, FAF1, JUN, LMNA, LMNB1, LMNB2, MAP2K4, MAP3K1, MAP3K7, MAPK8, PAK1, PAK2, PRKDC, PTPN13, RB1, RIPK2, SPTAN1, TNFRSF6, TNFSF6 27 CASP10(3), CASP3(4), CASP8(3), CFLAR(1), DAXX(2), DFFA(3), FAF1(2), LMNB1(1), LMNB2(1), MAP2K4(2), MAP3K1(3), MAP3K7(3), MAPK8(3), PAK1(5), PAK2(3), PRKDC(14), PTPN13(7), RB1(5), SPTAN1(7) 8099523 72 36 72 22 20 16 18 5 13 0 0.599 1.000 1.000 431 HSA00360_PHENYLALANINE_METABOLISM Genes involved in phenylalanine metabolism ABP1, ALDH1A3, ALDH3A1, ALDH3B1, ALDH3B2, AOC2, AOC3, ARD1A, DDC, EPX, ESCO1, ESCO2, GOT1, GOT2, HPD, LPO, LYCAT, MAOA, MAOB, MIF, MPO, MYST3, MYST4, NAT5, NAT6, PNPLA3, PRDX6, SH3GLB1, TAT, TPO 27 ABP1(4), ALDH1A3(1), ALDH3A1(1), ALDH3B2(3), AOC2(3), AOC3(2), DDC(6), EPX(3), ESCO1(5), ESCO2(2), GOT1(2), GOT2(3), HPD(2), LPO(2), MPO(2), MYST3(7), MYST4(6), PNPLA3(1), PRDX6(1), SH3GLB1(1), TAT(2), TPO(9) 6629310 68 36 68 26 12 24 14 8 10 0 0.840 1.000 1.000 432 HSA01031_GLYCAN_STRUCTURES_BIOSYNTHESIS_2 Genes involved in glycan structures - biosynthesis 2 A4GALT, ABO, B3GALNT1, B3GALT1, B3GALT2, B3GALT4, B3GALT5, B3GNT1, B3GNT2, B3GNT3, B3GNT4, B3GNT5, B4GALNT1, B4GALT1, B4GALT2, B4GALT3, B4GALT4, B4GALT6, FUT1, FUT2, FUT3, FUT4, FUT5, FUT6, FUT7, FUT9, GBGT1, GCNT2, PIGA, PIGB, PIGC, PIGF, PIGG, PIGH, PIGK, PIGL, PIGM, PIGN, PIGO, PIGP, PIGQ, PIGS, PIGT, PIGU, PIGV, PIGX, PIGZ, ST3GAL1, ST3GAL2, ST3GAL3, ST3GAL4, ST3GAL5, ST3GAL6, ST6GALNAC3, ST6GALNAC4, ST6GALNAC5, ST6GALNAC6, ST8SIA1, ST8SIA5, UGCG, UGCGL1, UGCGL2 60 ABO(1), B3GALNT1(1), B3GALT1(1), B3GALT2(1), B3GNT1(3), B3GNT2(1), B3GNT3(1), B3GNT5(1), B4GALNT1(2), B4GALT1(1), B4GALT2(2), B4GALT3(1), B4GALT4(1), B4GALT6(3), FUT1(2), FUT3(1), FUT7(1), FUT9(1), GCNT2(1), PIGB(1), PIGC(1), PIGG(5), PIGM(4), PIGN(1), PIGO(4), PIGQ(1), PIGS(1), PIGT(1), PIGV(2), PIGX(1), PIGZ(1), ST3GAL1(2), ST3GAL2(2), ST3GAL3(1), ST3GAL4(1), ST3GAL6(1), ST6GALNAC3(8), ST6GALNAC5(1), ST6GALNAC6(1), ST8SIA5(2) 9415839 68 36 67 32 19 12 23 10 4 0 0.937 1.000 1.000 433 LYSINE_DEGRADATION AADAT, AASDH, AASDHPPT, AASS, ACAT1, ACAT2, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, ATP6V0C, SHMT1, BAT8, BBOX1, DLST, DLSTP, DOT1L, ECHS1, EHHADH, EHMT1, EHMT2, GCDH, HADHA, PLOD1, PLOD2, PLOD3, SDS, SHMT1, SHMT2, TMLHE 31 AASDH(3), AASDHPPT(1), AASS(4), ACAT1(1), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH9A1(2), BBOX1(2), DLST(1), DOT1L(6), EHHADH(3), EHMT1(4), EHMT2(1), GCDH(1), HADHA(2), PLOD1(2), PLOD2(2), PLOD3(2), SHMT1(2), SHMT2(1), TMLHE(2) 7226451 60 36 60 19 10 18 16 6 8 2 0.563 1.000 1.000 434 NUCLEAR_RECEPTORS ALK, AR, ESR1, ESR2, ESRRA, HNF4A, NPM1, NR0B1, NR1D2, NR1H2, NR1H3, NR1I2, NR1I3, NR2C2, NR2E1, NR2F1, NR2F2, NR2F6, NR3C1, NR4A1, NR4A2, NR5A1, NR5A2, PGR, PPARA, PPARD, PPARG, RARA, RARB, RARG, ROR1, RORA, RORC, RXRA, RXRB, RXRG, THRA, THRA, NR1D1, THRB, VDR 40 ALK(14), AR(2), ESR2(2), HNF4A(3), NPM1(2), NR0B1(1), NR1D1(2), NR1D2(2), NR1H2(1), NR1H3(2), NR1I2(1), NR1I3(1), NR2C2(1), NR2E1(4), NR2F2(2), NR3C1(1), NR4A1(1), NR4A2(2), NR5A2(3), PGR(5), PPARD(1), PPARG(2), RARA(2), ROR1(1), RORA(1), RORC(1), RXRG(6), THRA(1), THRB(4) 8128419 71 36 71 39 21 22 11 9 8 0 0.996 1.000 1.000 435 ST_GAQ_PATHWAY G-alpha-q activates phospholipase C, resulting in calcium influx and increasing protein kinase C activity. ADRBK1, AKT1, AKT2, AKT3, BF, DAG1, GNAQ, IKBKG, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, PDK1, PHKA2, PIK3CB, PITX2, PLD1, PLD2, PLD3, VN1R1 26 ADRBK1(1), AKT2(1), AKT3(2), DAG1(2), GNAQ(2), ITPKA(1), ITPKB(4), ITPR1(7), ITPR2(15), ITPR3(4), NFKB1(2), NFKB2(3), NFKBIE(1), PDK1(2), PHKA2(6), PIK3CB(2), PITX2(3), PLD1(7), PLD2(3) 8726334 68 36 67 19 15 18 22 6 7 0 0.267 1.000 1.000 436 TRANSLATION_FACTORS ANKHD1, ANKHD1, MASK_BP3, EEF1A2, EEF1B2, EEF1D, EEF1G, EEF2, EEF2K, EIF1AX, EIF1AY, EIF2AK1, EIF2AK2, EIF2AK3, EIF2B1, EIF2B2, EIF2B3, EIF2B4, EIF2B5, EIF2S1, EIF2S2, EIF2S3, EIF3S1, EIF3S10, EIF3S2, EIF3S3, EIF3S4, EIF3S5, EIF3S6, EIF3S7, EIF3S8, EIF3S9, EIF4A1, EIF4A2, EIF4E, EIF4EBP1, EIF4EBP2, EIF4G1, EIF4G3, EIF5, EIF5A, EIF5B, ETF1, GSPT2, ITGB4BP, KIAA0664, PABPC1, PABPC3, PABPC1, LOC341315, PAIP1, PAIP1, LOC388345, SLC35A4, SUI1, WBSCR1 37 EEF1A2(4), EEF1B2(2), EEF1G(1), EEF2(1), EEF2K(1), EIF1AX(1), EIF2AK1(1), EIF2AK2(2), EIF2AK3(5), EIF2B2(2), EIF2B3(3), EIF2B4(2), EIF2B5(3), EIF2S3(1), EIF4A1(2), EIF4A2(3), EIF4E(2), EIF4G1(6), EIF4G3(4), EIF5B(7), GSPT2(2), PABPC1(1), PABPC3(6), PAIP1(4) 8529738 66 36 66 18 13 20 19 8 6 0 0.419 1.000 1.000 437 CARDIACEGFPATHWAY Cardiac hypertrophy, a response to high blood pressure, is stimulated by GPCR ligands such as angiotensin II that activate the EGF pathway. ADAM12, AGT, AGTR2, ARHA, EDN1, EDNRA, EDNRB, EGF, EGFR, FOS, HRAS, JUN, MYC, NFKB1, PLCG1, PRKCA, PRKCB1, RELA 16 ADAM12(5), AGTR2(2), EDNRB(2), EGF(7), EGFR(24), HRAS(1), NFKB1(2), PLCG1(4), PRKCA(7) 3957462 54 35 44 17 9 11 13 14 7 0 0.699 1.000 1.000 438 HSA00052_GALACTOSE_METABOLISM Genes involved in galactose metabolism AKR1B1, AKR1B10, B4GALT1, B4GALT2, G6PC, G6PC2, GAA, GALE, GALK1, GALK2, GALT, GANC, GCK, GLA, GLB1, HK1, HK2, HK3, HSD3B7, LALBA, LCT, MGAM, PFKL, PFKM, PFKP, PGM1, PGM3, RDH11, RDH12, RDH13, RDH14, UGP2 32 AKR1B1(1), AKR1B10(3), B4GALT1(1), B4GALT2(2), G6PC(1), G6PC2(1), GAA(1), GALK2(1), GALT(1), GANC(1), GCK(1), GLA(2), HK1(3), HK2(5), HK3(5), HSD3B7(2), LCT(12), MGAM(15), PFKL(1), PFKM(2), PFKP(3), PGM1(2), PGM3(2), UGP2(1) 7565076 69 35 69 21 18 23 15 9 4 0 0.420 1.000 1.000 439 HSA00220_UREA_CYCLE_AND_METABOLISM_OF_AMINO_GROUPS Genes involved in urea cycle and metabolism of amino groups ABP1, ACY1, ADC, AGMAT, ALDH18A1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, AMD1, AOC2, AOC3, ARG1, ARG2, ASL, ASS1, CPS1, GATM, MAOA, MAOB, NAGS, ODC1, OTC, SAT1, SAT2, SMS, SRM 30 ABP1(4), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2), AMD1(1), AOC2(3), AOC3(2), ARG1(1), ASL(2), ASS1(3), CPS1(23), GATM(3), OTC(2), SAT1(1), SMS(1) 5743983 60 35 60 26 9 18 19 8 6 0 0.909 1.000 1.000 440 HSA03030_DNA_POLYMERASE Genes involved in DNA polymerase POLA1, POLA2, POLB, POLD1, POLD2, POLD3, POLD4, POLE, POLE2, POLE3, POLE4, POLG, POLG2, POLH, POLI, POLK, POLL, POLM, POLQ, POLS, PRIM1, PRIM2, REV1, REV3L, RFC5 24 POLA1(1), POLB(2), POLD1(1), POLD3(2), POLE(12), POLG(8), POLI(1), POLK(3), POLM(4), POLQ(10), PRIM1(2), PRIM2(7), REV1(2), REV3L(7) 7962009 62 35 62 19 18 10 21 7 6 0 0.556 1.000 1.000 441 PROSTAGLANDIN_AND_LEUKOTRIENE_METABOLISM AKR1C3, ALOX12, ALOX15, ALOX5, CBR1, CBR3, CYP4F2, CYP4F3, CYP4F3, CYP4F2, EPX, GGT1, LPO, LTA4H, MPO, PGDS, PLA2G1B, PLA2G2A, PLA2G2E, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PRDX1, PRDX2, PRDX5, PRDX6, PTGDS, PTGES2, PTGIS, PTGS1, PTGS2, TBXAS1, TPO 31 AKR1C3(1), ALOX12(1), ALOX15(1), ALOX5(3), CYP4F2(3), CYP4F3(7), EPX(3), GGT1(1), LPO(2), MPO(2), PLA2G1B(1), PLA2G2A(3), PLA2G2E(1), PLA2G3(4), PLA2G4A(5), PLA2G6(1), PRDX2(1), PRDX5(1), PRDX6(1), PTGDS(2), PTGIS(1), PTGS1(3), PTGS2(4), TBXAS1(4), TPO(9) 5375817 65 35 65 21 9 16 19 12 9 0 0.552 1.000 1.000 442 ST_DICTYOSTELIUM_DISCOIDEUM_CAMP_CHEMOTAXIS_PATHWAY The fungus Dictyostelium discoideum is a model system for cytoskeletal organization during chemotaxis. ACTR2, ACTR3, AKT1, ANGPTL2, BF, DAG1, DGKA, ETFA, GCA, ITGA9, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, MAP2K1, MAPK1, MAPK3, NR1I3, PAK1, PDE3A, PDE3B, PI3, PIK3C2G, PIK3CA, PIK3CD, PIK3R1, PLDN, PSME1, RIPK3, RPS4X, SGCB, VASP 32 ACTR2(1), ACTR3(1), ANGPTL2(2), DAG1(2), DGKA(2), GCA(1), ITGA9(1), ITPKA(1), ITPKB(4), ITPR1(7), ITPR2(15), ITPR3(4), MAP2K1(4), MAPK3(1), NR1I3(1), PAK1(5), PDE3A(5), PDE3B(3), PI3(1), PIK3C2G(3), PIK3CA(5), PIK3R1(1), PSME1(1), RIPK3(1), SGCB(1) 9547161 73 35 71 18 17 21 18 8 9 0 0.241 1.000 1.000 443 VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION ACAA1, ACAA2, ACADL, ACADM, ACADS, ACADSB, ACAT1, ACAT2, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH6A1, ALDH9A1, AOX1, BCAT1, BCKDHA, BCKDHB, ECHS1, EHHADH, HADHA, HADHB, HIBADH, HMGCL, IVD, MCCC1, MCCC2, MCEE, MUT, OXCT1, PCCA, PCCB, SDS 36 ACAA2(3), ACADM(3), ACAT1(1), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH9A1(2), AOX1(6), BCKDHB(4), EHHADH(3), HADHA(2), HADHB(2), HIBADH(1), MCCC1(2), MCCC2(2), MUT(4), OXCT1(4), PCCA(4), PCCB(1) 6972966 62 35 62 23 6 22 14 6 12 2 0.816 1.000 1.000 444 CREBPATHWAY CREB is a transcription factor that binds to cAMP-responsive elements (CREs) to activate transcription in response to extracellular signaling. ADCY1, AKT1, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CREB1, GNAS, GRB2, HRAS, MAPK1, MAPK14, MAPK3, PIK3CA, PIK3R1, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, RAC1, RPS6KA1, RPS6KA5, SOS1 26 ADCY1(8), CAMK2A(1), CAMK2D(1), CAMK2G(2), GNAS(3), GRB2(3), HRAS(1), MAPK14(1), MAPK3(1), PIK3CA(5), PIK3R1(1), PRKACB(2), PRKACG(1), PRKAR1B(4), PRKCA(7), RPS6KA5(2), SOS1(9) 5624142 52 34 51 19 8 16 13 9 6 0 0.850 1.000 1.000 445 HSA00051_FRUCTOSE_AND_MANNOSE_METABOLISM Genes involved in fructose and mannose metabolism AKR1B1, AKR1B10, ALDOA, ALDOB, ALDOC, FBP1, FBP2, FPGT, FUK, GMDS, GMPPA, GMPPB, HK1, HK2, HK3, HSD3B7, KHK, LHPP, MPI, MTMR1, MTMR2, MTMR6, PFKFB1, PFKFB2, PFKFB3, PFKFB4, PFKL, PFKM, PFKP, PGM2, PHPT1, PMM1, PMM2, RDH11, RDH12, RDH13, RDH14, SORD, TPI1, TSTA3, UGCGL1, UGCGL2 40 AKR1B1(1), AKR1B10(3), ALDOA(1), ALDOB(2), ALDOC(1), FPGT(1), FUK(2), GMDS(3), GMPPA(1), GMPPB(1), HK1(3), HK2(5), HK3(5), HSD3B7(2), KHK(1), MTMR1(2), MTMR2(1), MTMR6(3), PFKFB1(2), PFKFB2(3), PFKFB3(4), PFKFB4(3), PFKL(1), PFKM(2), PFKP(3), PGM2(5), PMM1(1), SORD(1), TPI1(3) 7318686 66 34 65 22 16 23 14 9 4 0 0.516 1.000 1.000 446 HSA00252_ALANINE_AND_ASPARTATE_METABOLISM Genes involved in alanine and aspartate metabolism AARS, AARS2, ABAT, ACY3, ADSL, ADSS, ADSSL1, AGXT, AGXT2, ASL, ASNS, ASPA, ASRGL1, ASS1, CAD, CRAT, DARS, DARS2, DDO, DLAT, DLD, GAD1, GAD2, GOT1, GOT2, GPT, GPT2, NARS, NARS2, PC, PDHA1, PDHA2, PDHB 33 AARS(1), AARS2(3), ABAT(1), ACY3(1), ADSSL1(1), AGXT(2), AGXT2(6), ASL(2), ASNS(2), ASPA(1), ASS1(3), CAD(9), DARS2(2), DDO(2), DLAT(3), DLD(3), GAD1(4), GAD2(5), GOT1(2), GOT2(3), GPT2(2), NARS(2), NARS2(2), PC(1), PDHA1(1), PDHA2(8) 7348356 72 34 72 23 19 21 20 7 5 0 0.422 1.000 1.000 447 HSA00640_PROPANOATE_METABOLISM Genes involved in propanoate metabolism ABAT, ACACA, ACACB, ACADM, ACAT1, ACAT2, ACSS1, ACSS2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH6A1, ALDH7A1, ALDH9A1, ECHS1, EHHADH, HADHA, HIBCH, LDHA, LDHAL6A, LDHAL6B, LDHB, LDHC, LOC283398, MCEE, MLYCD, MUT, PCCA, PCCB, SUCLA2, SUCLG1, SUCLG2 33 ABAT(1), ACACA(8), ACACB(7), ACADM(3), ACAT1(1), ACSS1(1), ACSS2(3), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2), EHHADH(3), HADHA(2), HIBCH(3), LDHA(3), LDHAL6A(3), LDHC(4), MLYCD(4), MUT(4), PCCA(4), PCCB(1), SUCLG1(1), SUCLG2(2) 7668276 72 34 72 30 18 24 12 6 11 1 0.922 1.000 1.000 448 HSA03022_BASAL_TRANSCRIPTION_FACTORS Genes involved in basal transcription factors GTF2A1, GTF2A1L, GTF2A2, GTF2B, GTF2E1, GTF2E2, GTF2F1, GTF2F2, GTF2H1, GTF2H2, GTF2H3, GTF2H4, GTF2I, GTF2IRD1, LOC391764, STON1, TAF1, TAF10, TAF12, TAF13, TAF1L, TAF2, TAF4, TAF4B, TAF5, TAF5L, TAF6, TAF6L, TAF7, TAF7L, TAF9, TAF9B, TBPL1, TBPL2 32 GTF2A1(3), GTF2B(1), GTF2E1(2), GTF2E2(1), GTF2F1(1), GTF2H1(4), GTF2I(3), GTF2IRD1(5), TAF1(3), TAF1L(17), TAF2(3), TAF4(2), TAF4B(3), TAF5L(3), TAF6(1), TAF9(1), TBPL2(2) 6979416 55 34 55 23 11 13 17 8 6 0 0.910 1.000 1.000 449 MONOCYTEPATHWAY Monocytes are a class of immune phagocytes that can develop into macrophages and express LFA-1, CD44, and other surface signaling proteins. CD44, ICAM1, ITGA4, ITGAL, ITGAM, ITGB1, ITGB2, PECAM1, SELE, SELL, SELP 11 CD44(1), ITGA4(11), ITGAL(17), ITGAM(9), ITGB1(2), ITGB2(2), SELE(2), SELL(1), SELP(11) 3114060 56 34 56 22 8 18 15 9 6 0 0.923 1.000 1.000 450 ACE2PATHWAY Angiotensin-converting enzyme 2 (ACE2) digests the blood-pressure regulator angiotensin II (AGT) ultimately to the vasodilator AGT1-7. ACE2, AGT, AGTR1, AGTR2, CMA1, COL4A1, COL4A2, COL4A3, COL4A4, COL4A5, COL4A6, REN 12 ACE2(3), AGTR1(1), AGTR2(2), CMA1(3), COL4A1(7), COL4A2(9), COL4A3(3), COL4A4(8), COL4A5(13), COL4A6(9) 4993461 58 33 58 29 4 27 11 8 8 0 0.995 1.000 1.000 451 DNA_REPLICATION_REACTOME ASK, CDC45L, CDC6, CDC7, CDK2, CDT1, DIAPH2, GMNN, MCM10, MCM2, MCM3, MCM4, MCM5, MCM6, MCM7, NACA, NACA, FKSG17, ORC1L, ORC2L, ORC3L, ORC4L, ORC5L, ORC6L, PCNA, POLA, POLA2, POLD1, POLD2, POLD3, POLD4, POLE, POLE2, PRIM1, PRIM2A, RFC1, RFC2, RFC3, RFC4, RFC5, RPA1, RPA2, RPA3, RPA4, RPS27A, RPS27A, LOC388720, LOC389425, UBA52, UBB, UBC 42 CDC6(1), CDC7(3), CDK2(4), CDT1(2), DIAPH2(3), GMNN(1), MCM10(1), MCM2(4), MCM3(3), MCM4(5), MCM5(1), MCM6(5), MCM7(1), NACA(1), ORC1L(2), ORC2L(1), ORC4L(1), ORC5L(3), POLD1(1), POLD3(2), POLE(12), PRIM1(2), RFC1(6), RFC3(1), RPA2(1), RPA4(3), UBC(7) 9871338 77 33 77 25 29 15 21 6 6 0 0.483 1.000 1.000 452 GALACTOSE_METABOLISM AKR1B1, B4GALT1, B4GALT2, FBP2, G6PC, GAA, GALE, GALK1, GALK2, GALT, GANAB, GCK, GLA, GLB1, HK1, HK2, HK3, LALBA, LCT, MGAM, PFKM, PFKP, PGM1, PGM3 24 AKR1B1(1), B4GALT1(1), B4GALT2(2), G6PC(1), GAA(1), GALK2(1), GALT(1), GANAB(3), GCK(1), GLA(2), HK1(3), HK2(5), HK3(5), LCT(12), MGAM(15), PFKM(2), PFKP(3), PGM1(2), PGM3(2) 6365247 63 33 63 22 18 19 14 8 4 0 0.618 1.000 1.000 453 HDACPATHWAY Myocyte enhancer factor MEF2 activates transcription of genes required for muscle cell differentiation and is inhibited by histone deacetylases. AKT1, AVP, CABIN1, CALM1, CALM2, CALM3, CAMK1, CAMK1G, HDAC5, IGF1, IGF1R, INS, INSR, MAP2K6, MAPK14, MAPK7, MEF2A, MEF2B, MEF2C, MEF2D, MYOD1, NFATC1, NFATC2, PIK3CA, PIK3R1, PPP3CA, PPP3CB, PPP3CC, SYT1, YWHAH 30 CABIN1(2), CALM1(1), CAMK1(2), HDAC5(2), IGF1(3), IGF1R(6), INSR(1), MAPK14(1), MAPK7(4), MEF2C(1), MEF2D(1), MYOD1(2), NFATC1(1), NFATC2(5), PIK3CA(5), PIK3R1(1), PPP3CA(2), PPP3CB(1), PPP3CC(1), SYT1(3) 6748506 45 33 44 16 5 19 11 5 5 0 0.680 1.000 1.000 454 HSA00910_NITROGEN_METABOLISM Genes involved in nitrogen metabolism AMT, ASNS, ASRGL1, CA1, CA12, CA13, CA14, CA2, CA3, CA4, CA5A, CA5B, CA6, CA7, CA8, CA9, CPS1, CTH, GLS, GLS2, GLUD1, GLUD2, GLUL, HAL 24 AMT(2), ASNS(2), CA1(2), CA13(1), CA14(1), CA2(1), CA3(3), CA4(2), CA5A(1), CA8(2), CA9(1), CPS1(23), GLS(1), GLS2(2), GLUD1(3), GLUD2(3), HAL(1) 4122840 51 33 51 24 7 17 12 9 6 0 0.984 1.000 1.000 455 IL2RBPATHWAY The beta subunit of the IL-2 receptor is required for IL-2 and IL-15 signal recognition and activates JAK kinase on ligand binding. AKT1, BAD, BCL2, BCL2L1, CBL, CFLAR, CRKL, E2F1, FOS, GRB2, HRAS, IL2RA, IL2RB, IL2RG, IRS1, JAK1, JAK3, MAPK1, MAPK3, MYC, NMI, PIK3CA, PIK3R1, PPIA, PTPN6, RAF1, RPS6KB1, SHC1, SOCS1, SOCS3, SOS1, STAT5A, STAT5B, SYK, TNFRSF6, TNFSF6, ZNFN1A3 34 BCL2(1), CBL(7), CFLAR(1), CRKL(2), GRB2(3), HRAS(1), IL2RA(3), IL2RB(4), IRS1(12), JAK1(5), JAK3(3), MAPK3(1), NMI(1), PIK3CA(5), PIK3R1(1), PTPN6(2), RAF1(2), SHC1(2), SOS1(9), STAT5A(2), STAT5B(3), SYK(1) 7001991 71 33 69 20 20 12 15 16 8 0 0.230 1.000 1.000 456 BILE_ACID_BIOSYNTHESIS ACAA1, ACAA2, ADH1A, ADH1A, ADH1B, ADH1C, ADH1B, ADH1C, ADH4, ADH6, ADH7, ADHFE1, AKR1C4, AKR1D1, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, BAAT, CEL, CYP27A1, CYP7A1, HADHB, SOAT2, SRD5A1, SRD5A2 27 ACAA2(3), ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH6(4), ADH7(3), ADHFE1(2), AKR1C4(1), AKR1D1(2), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH9A1(2), BAAT(3), CEL(3), CYP27A1(3), CYP7A1(4), HADHB(2), SRD5A1(3) 4500552 70 32 70 26 9 33 15 6 7 0 0.762 1.000 1.000 457 EIF4PATHWAY The eIF-4F complex recognizes 5' mRNA caps, recruits RNA helicases, and maintains mRNA-ribosome bridging. AKT1, EIF4A1, EIF4A2, EIF4E, EIF4EBP1, EIF4G1, EIF4G2, EIF4G3, FRAP1, GHR, IRS1, MAPK1, MAPK14, MAPK3, MKNK1, PABPC1, PDK2, PDPK1, PIK3CA, PIK3R1, PRKCA, PRKCB1, PTEN, RPS6KB1 22 EIF4A1(2), EIF4A2(3), EIF4E(2), EIF4G1(6), EIF4G3(4), GHR(1), IRS1(12), MAPK14(1), MAPK3(1), MKNK1(1), PABPC1(1), PIK3CA(5), PIK3R1(1), PRKCA(7), PTEN(3) 5435673 50 32 48 25 13 13 16 5 3 0 0.972 1.000 1.000 458 PROSTAGLANDIN_SYNTHESIS_REGULATION ANXA1, ANXA2, ANXA3, ANXA4, ANXA5, ANXA6, ANXA8, CYP11A1, EDN1, EDNRA, EDNRB, HPGD, HSD11B1, HSD11B2, PLA2G4A, PRL, PTGDR, PTGDS, PTGER1, PTGER2, PTGER4, PTGFR, PTGIR, PTGIS, PTGS1, PTGS2, S100A6, SCGB1A1, TBXAS1 27 ANXA1(2), ANXA2(2), ANXA3(3), ANXA4(2), ANXA5(1), EDNRB(2), HPGD(1), HSD11B1(2), HSD11B2(1), PLA2G4A(5), PTGDS(2), PTGER2(1), PTGER4(4), PTGFR(5), PTGIR(1), PTGIS(1), PTGS1(3), PTGS2(4), TBXAS1(4) 4008288 46 32 46 18 9 11 13 6 7 0 0.857 1.000 1.000 459 VITCBPATHWAY Vitamin C (ascorbic acid), in addition to its role in collagen modification, serves as an antioxidant and is imported into cells by Svct2 in the brain and Svct1 in intestinal epithelium. COL4A1, COL4A2, COL4A3, COL4A4, COL4A5, COL4A6, P4HB, SLC23A1, SLC23A2, SLC2A1, SLC2A3 11 COL4A1(7), COL4A2(9), COL4A3(3), COL4A4(8), COL4A5(13), COL4A6(9), P4HB(2), SLC23A2(2), SLC2A3(4) 4969209 57 32 57 27 5 25 8 8 11 0 0.984 1.000 1.000 460 NFKBPATHWAY Inactive nuclear factor kB (NF-kB) is inhibited by the IkB family in the cytoplasm; active NF-kB is localized in the nucleus and regulates transcription of a variety of genes. CHUK, FADD, IKBKB, IKBKG, IL1A, IL1R1, IRAK1, MAP3K1, MAP3K14, MAP3K7, MAP3K7IP1, MYD88, NFKB1, NFKBIA, RELA, RIPK1, TLR4, TNF, TNFAIP3, TNFRSF1A, TNFRSF1B, TRADD, TRAF6 21 CHUK(1), IKBKB(2), IL1A(2), IRAK1(2), MAP3K1(3), MAP3K14(1), MAP3K7(3), MYD88(2), NFKB1(2), RIPK1(3), TLR4(23), TNFRSF1B(1), TRAF6(3) 4735848 48 31 47 21 6 14 16 5 7 0 0.938 1.000 1.000 461 NITROGEN_METABOLISM AMT, ASNS, CA1, CA12, CA14, CA2, CA3, CA4, CA5A, CA5B, CA6, CA7, CA8, CA9, CPS1, CTH, GLS, GLS2, GLUD1, GLUL, HAL 21 AMT(2), ASNS(2), CA1(2), CA14(1), CA2(1), CA3(3), CA4(2), CA5A(1), CA8(2), CA9(1), CPS1(23), GLS(1), GLS2(2), GLUD1(3), HAL(1) 3685401 47 31 47 23 7 13 12 9 6 0 0.986 1.000 1.000 462 RNA_TRANSCRIPTION_REACTOME CCNH, CDK7, ERCC3, GTF2A2, GTF2B, GTF2E1, GTF2E2, GTF2F2, GTF2H1, GTF2H2, GTF2H4, ILK, MGC9850, MNAT1, POLR1A, POLR1B, POLR2A, POLR2B, POLR2C, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR3B, POLR3D, POLR3E, POLR3H, POLR3K, TAF12, TAF13, TAF5, TAF6, TAF7, TAF9, TBP, VARS2L 36 CDK7(2), ERCC3(4), GTF2B(1), GTF2E1(2), GTF2E2(1), GTF2H1(4), MNAT1(2), POLR1A(5), POLR1B(8), POLR2A(6), POLR2B(1), POLR2C(2), POLR2E(1), POLR2G(2), POLR2H(2), POLR3B(10), POLR3D(2), POLR3E(1), POLR3H(1), TAF6(1), TAF9(1) 6778434 59 31 58 22 13 17 17 6 6 0 0.819 1.000 1.000 463 EPHA4PATHWAY Eph Kinases and ephrins support platelet aggregation ACTA1, EPHA4, EPHB1, FYN, ITGA1, ITGB1, L1CAM, LYN, RAP1B, SELP 10 EPHA4(4), EPHB1(17), FYN(2), ITGA1(5), ITGB1(2), L1CAM(7), LYN(3), RAP1B(1), SELP(11) 3045303 52 30 52 18 9 13 13 13 4 0 0.799 1.000 1.000 464 FIBRINOLYSISPATHWAY Thrombin cleavage of fibrinogen results in rapid formation of fibrin threads that form a mesh to capture platelets and other blood cells into a clot. CPB2, F13A1, F2, F2R, FGA, FGB, FGG, PLAT, PLAU, PLG, SERPINB2, SERPINE1 12 F13A1(7), F2(5), F2R(2), FGA(2), FGB(10), FGG(2), PLAT(4), PLG(8), SERPINB2(3), SERPINE1(3) 2592900 46 30 46 16 4 21 11 6 4 0 0.896 1.000 1.000 465 HSA00020_CITRATE_CYCLE Genes involved in citrate cycle (TCA cycle) ACLY, ACO1, ACO2, CLYBL, CS, DLD, DLST, FH, IDH1, IDH2, IDH3A, IDH3B, IDH3G, LOC283398, LOC441996, MDH1, MDH2, OGDH, OGDHL, PC, PCK1, PCK2, SDHA, SDHB, SDHC, SDHD, SUCLA2, SUCLG1, SUCLG2 27 ACLY(1), ACO1(2), ACO2(1), CLYBL(2), CS(1), DLD(3), DLST(1), FH(1), IDH1(2), IDH2(2), IDH3A(2), IDH3G(1), MDH1(1), OGDHL(5), PC(1), PCK1(8), PCK2(1), SDHA(5), SDHD(1), SUCLG1(1), SUCLG2(2) 5748498 44 30 44 19 13 6 10 8 7 0 0.756 1.000 1.000 466 HSA00030_PENTOSE_PHOSPHATE_PATHWAY Genes involved in pentose phosphate pathway ALDOA, ALDOB, ALDOC, DERA, FBP1, FBP2, G6PD, GPI, H6PD, PFKL, PFKM, PFKP, PGD, PGLS, PGM1, PGM3, PRPS1, PRPS1L1, PRPS2, RBKS, RPE, RPIA, TALDO1, TKT, TKTL1, TKTL2 26 ALDOA(1), ALDOB(2), ALDOC(1), DERA(1), G6PD(2), GPI(3), H6PD(3), PFKL(1), PFKM(2), PFKP(3), PGD(1), PGM1(2), PGM3(2), PRPS1(3), PRPS1L1(2), PRPS2(1), RPE(1), RPIA(2), TKTL1(6), TKTL2(6) 4734945 45 30 45 16 10 11 12 9 3 0 0.631 1.000 1.000 467 HSA00903_LIMONENE_AND_PINENE_DEGRADATION Genes involved in limonene and pinene degradation ACOT11, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, ARD1A, CYP2C19, CYP2C9, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, ECHS1, EHHADH, ESCO1, ESCO2, HADHA, LYCAT, MYST3, MYST4, NAT5, NAT6, PNPLA3, SH3GLB1, YOD1 26 ACOT11(1), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH7A1(1), ALDH9A1(2), CYP2C19(5), CYP2C9(2), DHRS2(2), DHRS3(1), EHHADH(3), ESCO1(5), ESCO2(2), HADHA(2), MYST3(7), MYST4(6), PNPLA3(1), SH3GLB1(1), YOD1(1) 5986890 53 30 53 19 10 19 9 7 7 1 0.751 1.000 1.000 468 NKTPATHWAY T cell differentiation into Th1 and Th2 cells occurs by differential chemokine receptor expression, which mediates tissue localization and immune response. CCL3, CCL4, CCR1, CCR2, CCR3, CCR4, CCR5, CCR7, CD28, CD4, CSF2, CXCR3, CXCR4, IFNG, IFNGR1, IFNGR2, IL12A, IL12B, IL12RB1, IL12RB2, IL18R1, IL2, IL4, IL4R, IL5, TGFB1, TGFB2, TGFB3, TNFSF5 28 CCL3(1), CCL4(1), CCR1(1), CCR2(5), CCR3(1), CCR4(1), CCR5(1), CD28(1), CD4(1), CXCR3(1), CXCR4(3), IFNG(3), IFNGR1(3), IFNGR2(2), IL12A(2), IL12RB1(2), IL12RB2(6), IL2(3), IL4R(5), TGFB1(2), TGFB2(5), TGFB3(1) 3868581 51 30 51 18 5 14 13 9 10 0 0.660 1.000 1.000 469 PHENYLALANINE_METABOLISM ABP1, ALDH1A3, ALDH3A1, ALDH3B1, ALDH3B2, AOC2, AOC3, DDC, EPX, GOT1, GOT2, HPD, LPO, MAOA, MAOB, MPO, PRDX1, PRDX2, PRDX5, PRDX6, TAT, TPO 22 ABP1(4), ALDH1A3(1), ALDH3A1(1), ALDH3B2(3), AOC2(3), AOC3(2), DDC(6), EPX(3), GOT1(2), GOT2(3), HPD(2), LPO(2), MPO(2), PRDX2(1), PRDX5(1), PRDX6(1), TAT(2), TPO(9) 4261902 48 30 48 20 8 16 12 6 6 0 0.849 1.000 1.000 470 PORPHYRIN_AND_CHLOROPHYLL_METABOLISM ALAD, BLVRA, BLVRB, CP, CPOX, EPRS, FECH, GUSB, HCCS, HMBS, HMOX1, HMOX2, PPOX, UGT1A10, UGT1A10, UGT1A8, UGT1A7, UGT1A6, UGT1A5, UGT1A9, UGT1A4, UGT1A1, UGT1A3, UGT1A6, UGT1A8, UGT1A9, UGT2B15, UGT2B4, UROD, UROS 26 ALAD(2), BLVRB(1), CP(4), CPOX(3), EPRS(9), GUSB(2), HMBS(2), HMOX1(3), PPOX(2), UGT1A1(3), UGT1A10(3), UGT1A3(3), UGT1A4(1), UGT1A5(1), UGT1A6(2), UGT1A7(2), UGT1A9(4), UGT2B15(4), UGT2B4(6) 5315187 57 30 56 22 6 22 11 9 9 0 0.891 1.000 1.000 471 SA_B_CELL_RECEPTOR_COMPLEXES Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. ATF2, BCR, BLNK, ELK1, FOS, GRB2, HRAS, JUN, LYN, MAP2K1, MAP3K1, MAPK1, MAPK3, MAPK8IP3, PAPPA, RAC1, RPS6KA1, RPS6KA3, SHC1, SOS1, SYK, VAV1, VAV2, VAV3 24 ATF2(2), BCR(3), GRB2(3), HRAS(1), LYN(3), MAP2K1(4), MAP3K1(3), MAPK3(1), MAPK8IP3(1), PAPPA(6), RPS6KA3(1), SHC1(2), SOS1(9), SYK(1), VAV1(1), VAV2(2), VAV3(9) 6224508 52 30 52 20 6 15 13 10 8 0 0.834 1.000 1.000 472 CALCINEURINPATHWAY Increased intracellular calcium activates the phosphatase calcineurin in differentiating keratinocytes. CALM1, CALM2, CALM3, CDKN1A, GNAQ, MARCKS, NFATC1, NFATC2, NFATC3, NFATC4, PLCG1, PPP3CA, PPP3CB, PPP3CC, PRKCA, PRKCB1, SP1, SP3, SYT1 18 CALM1(1), GNAQ(2), NFATC1(1), NFATC2(5), NFATC3(7), NFATC4(2), PLCG1(4), PPP3CA(2), PPP3CB(1), PPP3CC(1), PRKCA(7), SP3(1), SYT1(3) 4049568 37 29 37 14 9 11 12 1 4 0 0.662 1.000 1.000 473 CELL2CELLPATHWAY Epithelial cell adhesion proteins such as cadherins transduce signals into the cell via catenins, which alter cell shape and motility. ACTN1, ACTN2, ACTN3, BCAR1, CSK, CTNNA1, CTNNA2, CTNNB1, PECAM1, PTK2, PXN, SRC, VCL 13 ACTN2(14), ACTN3(2), BCAR1(1), CTNNA1(2), CTNNA2(15), CTNNB1(9), PTK2(7), SRC(2), VCL(2) 3698559 54 29 53 18 9 17 12 12 4 0 0.591 1.000 1.000 474 CIRCADIAN_EXERCISE ARNTL, AZIN1, BTG1, C10orf110, C1orf1, CBX3, CEBPB, CLDN5, CLOCK, CRY1, CRY2, DAZAP2, DAZAP2, LOC401029, DNAJA1, EIF4G2, ETV6, G0S2, GENX_3414, GFRA1, GSTM3, GSTP1, HERPUD1, HLA_DMA, HSPA8, IDI1, KLF9, MAP3K7IP2, MYF6, NCKAP1, NCOA4, NR1D2, OAZIN, PER1, PER2, PIGF, PPP1R3C, PPP2CB, PSMA4, PURA, SF3A3, SUMO3, TOB1, TUBB3, UCP3, UGP2, VAPA, ZFR 40 ARNTL(2), BTG1(1), CBX3(2), CLOCK(2), CRY1(3), CRY2(2), DAZAP2(1), ETV6(3), GFRA1(2), GSTM3(1), GSTP1(2), HERPUD1(2), IDI1(1), MYF6(4), NCKAP1(2), NCOA4(4), NR1D2(2), PER1(2), PER2(4), PPP1R3C(1), PPP2CB(2), SF3A3(1), TOB1(1), UCP3(1), UGP2(1), ZFR(2) 7136409 51 29 51 25 12 19 9 3 8 0 0.992 1.000 1.000 475 HSA00565_ETHER_LIPID_METABOLISM Genes involved in ether lipid metabolism AGPAT1, AGPAT2, AGPAT3, AGPAT4, AGPAT6, AGPS, CHPT1, ENPP2, ENPP6, LYCAT, PAFAH1B1, PAFAH1B2, PAFAH1B3, PAFAH2, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLD1, PLD2, PPAP2A, PPAP2B, PPAP2C 30 AGPAT1(1), AGPAT2(3), AGPAT3(2), AGPAT4(1), AGPAT6(1), AGPS(2), ENPP2(6), ENPP6(2), PAFAH1B2(1), PAFAH2(1), PLA2G10(1), PLA2G12B(1), PLA2G1B(1), PLA2G2A(3), PLA2G2E(1), PLA2G2F(1), PLA2G3(4), PLA2G4A(5), PLA2G6(1), PLD1(7), PLD2(3), PPAP2B(1) 4508937 49 29 49 18 9 16 11 6 7 0 0.824 1.000 1.000 476 MTORPATHWAY Mammalian target of rapamycin (mTOR) senses mitogenic factors and nutrients, including ATP, and induces cell proliferation. AKT1, EIF3S10, EIF4A1, EIF4A2, EIF4B, EIF4E, EIF4EBP1, EIF4G1, EIF4G2, EIF4G3, FKBP1A, FRAP1, MKNK1, PDK2, PDPK1, PIK3CA, PIK3R1, PPP2CA, PTEN, RPS6, RPS6KB1, TSC1, TSC2 21 EIF4A1(2), EIF4A2(3), EIF4B(3), EIF4E(2), EIF4G1(6), EIF4G3(4), MKNK1(1), PIK3CA(5), PIK3R1(1), PTEN(3), TSC1(7), TSC2(2) 5375817 39 29 37 19 4 13 14 5 3 0 0.961 1.000 1.000 477 PROPANOATE_METABOLISM ABAT, ACACA, ACADL, ACADM, ACADSB, ACAS2, ACAS2L, ACAT1, ACAT2, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH6A1, ALDH9A1, ECHS1, EHHADH, HADHA, LDHA, LDHB, LDHC, MCEE, MLYCD, MUT, PCCA, PCCB, SDS, SUCLA2, SUCLG1, SUCLG2 31 ABAT(1), ACACA(8), ACADM(3), ACAT1(1), ALDH1A1(1), ALDH1A2(6), ALDH1A3(1), ALDH1B1(6), ALDH2(1), ALDH3A1(1), ALDH3A2(2), ALDH9A1(2), EHHADH(3), HADHA(2), LDHA(3), LDHC(4), MLYCD(4), MUT(4), PCCA(4), PCCB(1), SUCLG1(1), SUCLG2(2) 6391047 61 29 61 20 14 21 11 5 9 1 0.647 1.000 1.000 478 ST_P38_MAPK_PATHWAY p38 is a MAP kinase regulated by cytokines and cellular stress. AKT1, ATF1, CDC42, CREB1, CREB3, CREB5, DUSP1, DUSP10, EEF2K, EIF4E, ELK1, GADD45A, HSPB1, IL1R1, MAP2K3, MAP2K4, MAP2K6, MAP3K10, MAP3K4, MAP3K5, MAP3K7, MAP3K7IP1, MAP3K7IP2, MAPK1, MAPK11, MAPK12, MAPK13, MAPK14, MAPKAPK2, MAPKAPK5, MKNK1, MKNK2, MYEF2, NFKB1, NR2C2, SRF, TRAF6 35 CDC42(2), CREB5(4), DUSP10(6), EEF2K(1), EIF4E(2), GADD45A(1), MAP2K3(3), MAP2K4(2), MAP3K10(1), MAP3K4(8), MAP3K5(8), MAP3K7(3), MAPK14(1), MAPKAPK2(2), MAPKAPK5(3), MKNK1(1), MYEF2(3), NFKB1(2), NR2C2(1), TRAF6(3) 6449742 57 29 56 17 19 10 13 7 8 0 0.409 1.000 1.000 479 COMPLEMENT_ACTIVATION_CLASSICAL C1QA, C1QB, C1QG, C1R, C1S, C2, C3, C4A, C4B, C5, C6, C7, C8A, C8B, C9, DAF, MASP1 13 C1QB(2), C1R(1), C1S(1), C2(1), C3(3), C5(1), C6(7), C7(14), C8A(2), C8B(7), C9(7), MASP1(2) 4066467 48 28 47 20 8 17 11 9 3 0 0.930 1.000 1.000 480 DEATHPATHWAY Death receptors such as Fas and DR3, 4, and 5 transduce pro-apoptotic signaling by oligomerizing to activate the caspase cascade. APAF1, BCL2, BID, BIRC2, BIRC3, BIRC4, CASP10, CASP3, CASP6, CASP7, CASP8, CASP9, CFLAR, CHUK, CYCS, DFFA, DFFB, FADD, GAS2, LMNA, MAP3K14, NFKB1, NFKBIA, RELA, RIPK1, SPTAN1, TNFRSF10A, TNFRSF10B, TNFRSF25, TNFSF10, TNFSF12, TRADD, TRAF2 32 APAF1(4), BCL2(1), BID(1), BIRC2(2), BIRC3(2), CASP10(3), CASP3(4), CASP8(3), CASP9(2), CFLAR(1), CHUK(1), DFFA(3), GAS2(1), MAP3K14(1), NFKB1(2), RIPK1(3), SPTAN1(7), TNFRSF10B(1), TNFRSF25(1), TNFSF10(1) 6523788 44 28 44 22 10 12 11 5 6 0 0.981 1.000 1.000 481 ERBB3PATHWAY Neuregulins bind to the receptor tyrosine kinases ErbB3 and ErbB4, surface-localized receptors whose overexpression induces tumor formation. EGF, EGFR, ERBB3, NRG1, UBE2D1 5 EGF(7), EGFR(24), ERBB3(1), NRG1(6) 1997178 38 28 28 12 6 5 8 10 9 0 0.696 1.000 1.000 482 HSA00624_1_AND_2_METHYLNAPHTHALENE_DEGRADATION Genes involved in 1- and 2-methylnaphthalene degradation ACAD8, ACAD9, ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, ARD1A, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, ESCO1, ESCO2, LYCAT, MYST3, MYST4, NAT5, NAT6, PNPLA3, SH3GLB1 22 ACAD8(1), ACAD9(1), ADH1A(5), ADH1B(5), ADH1C(4), ADH4(3), ADH5(3), ADH6(4), ADH7(3), ADHFE1(2), DHRS2(2), DHRS3(1), ESCO1(5), ESCO2(2), MYST3(7), MYST4(6), PNPLA3(1), SH3GLB1(1) 4847304 56 28 56 21 7 32 4 5 8 0 0.897 1.000 1.000 483 IL1RPATHWAY The cytokine IL-1 stimulates its primary receptor, IL-1R1, which induces transcription of inflammation-related genes such as interferons. CHUK, IFNA1, IFNB1, IKBKB, IL1A, IL1B, IL1R1, IL1RAP, IL1RN, IL6, IRAK1, IRAK2, IRAK3, JUN, MAP2K3, MAP2K6, MAP3K1, MAP3K14, MAP3K7, MAP3K7IP1, MAPK14, MAPK8, MYD88, NFKB1, NFKBIA, RELA, SITPEC, TGFB1, TGFB2, TGFB3, TNF, TOLLIP, TRAF6 31 CHUK(1), IFNB1(3), IKBKB(2), IL1A(2), IL1RAP(2), IRAK1(2), IRAK3(2), MAP2K3(3), MAP3K1(3), MAP3K14(1), MAP3K7(3), MAPK14(1), MAPK8(3), MYD88(2), NFKB1(2), TGFB1(2), TGFB2(5), TGFB3(1), TRAF6(3) 5731728 43 28 42 23 8 7 10 10 8 0 0.987 1.000 1.000 484 VIPPATHWAY Apoptosis of activated T cells is inhibited by vasoactive intestinal peptide (VIP) and its relative PACAP. CALM1, CALM2, CALM3, CHUK, EGR2, EGR3, GNAQ, MAP3K1, MYC, NFATC1, NFATC2, NFKB1, NFKBIA, PLCG1, PPP3CA, PPP3CB, PPP3CC, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, RELA, SYT1, VIP, VIPR2 27 CALM1(1), CHUK(1), EGR2(1), GNAQ(2), MAP3K1(3), NFATC1(1), NFATC2(5), NFKB1(2), PLCG1(4), PPP3CA(2), PPP3CB(1), PPP3CC(1), PRKACB(2), PRKACG(1), PRKAR1B(4), SYT1(3), VIP(1), VIPR2(2) 5403681 37 28 37 14 6 11 11 2 7 0 0.724 1.000 1.000 485 BADPATHWAY When phosphorylated, BAD is inhibited by sequestration; when non-phosphorylated, it promotes apoptosis by inactivating pro-survival BCL-XL and BCL-2. ADCY1, AKT1, BAD, BAX, BCL2, BCL2L1, CSF2RB, IGF1, IGF1R, IL3, IL3RA, KIT, KITLG, PIK3CA, PIK3R1, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, YWHAH 22 ADCY1(8), BAX(1), BCL2(1), CSF2RB(3), IGF1(3), IGF1R(6), IL3(1), IL3RA(4), KIT(3), PIK3CA(5), PIK3R1(1), PRKACB(2), PRKACG(1), PRKAR1B(4) 4230297 43 27 42 17 5 18 13 3 4 0 0.810 1.000 1.000 486 HSA00361_GAMMA_HEXACHLOROCYCLOHEXANE_DEGRADATION Genes involved in gamma-hexachlorocyclohexane degradation ACP1, ACP2, ACP5, ACP6, ACPP, ACPT, ALPI, ALPL, ALPP, ALPPL2, CMBL, CYP3A4, CYP3A43, CYP3A5, CYP3A7, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, PON1, PON2, PON3 23 ACP1(1), ACP2(1), ACP5(2), ACPP(6), ALPI(2), ALPL(2), ALPP(3), ALPPL2(2), CMBL(1), CYP3A4(1), CYP3A43(1), CYP3A7(3), DHRS2(2), DHRS3(1), PON1(1), PON3(5) 3501834 34 27 34 22 4 7 12 4 7 0 0.991 1.000 1.000 487 HSA00534_HEPARAN_SULFATE_BIOSYNTHESIS Genes involved in heparan sulfate biosynthesis EXT1, EXT2, EXTL1, EXTL2, EXTL3, GLCE, HS2ST1, HS3ST1, HS3ST2, HS3ST3A1, HS3ST3B1, HS3ST5, HS6ST1, HS6ST2, HS6ST3, LOC728969, NDST1, NDST2, NDST3, NDST4 19 EXT1(1), EXT2(5), EXTL1(1), EXTL3(4), GLCE(3), HS3ST1(1), HS3ST3A1(1), HS3ST5(6), HS6ST1(1), HS6ST3(1), NDST1(1), NDST2(5), NDST3(6), NDST4(6) 4029831 42 27 41 24 4 17 13 5 3 0 0.992 1.000 1.000 488 HSA03020_RNA_POLYMERASE Genes involved in RNA polymerase POLR1A, POLR1B, POLR1C, POLR1D, POLR2A, POLR2B, POLR2C, POLR2D, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR2L, POLR3A, POLR3B, POLR3G, POLR3GL, POLR3H, POLR3K, ZNRD1 23 POLR1A(5), POLR1B(8), POLR1D(1), POLR2A(6), POLR2B(1), POLR2C(2), POLR2D(2), POLR2E(1), POLR2G(2), POLR2H(2), POLR2L(1), POLR3A(7), POLR3B(10), POLR3H(1) 4557183 49 27 48 16 12 12 12 7 6 0 0.636 1.000 1.000 489 SIG_CD40PATHWAYMAP Genes related to CD40 signaling DUSP1, GORASP1, IKBKG, MAP2K4, MAP2K7, MAPK1, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPK8, MAPK8IP1, MAPK8IP2, MAPK8IP3, MAPK9, MAPKAPK5, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, PIK3CA, PIK3CD, PIK3R1, SYT1, TNFRSF5, TRAF2, TRAF3, TRAF5, TRAF6 32 MAP2K4(2), MAP2K7(1), MAPK10(1), MAPK14(1), MAPK3(1), MAPK8(3), MAPK8IP1(3), MAPK8IP3(1), MAPK9(5), MAPKAPK5(3), NFKB1(2), NFKB2(3), NFKBIE(1), PIK3CA(5), PIK3R1(1), SYT1(3), TRAF3(1), TRAF5(1), TRAF6(3) 6540687 41 27 39 17 10 9 13 3 6 0 0.804 1.000 1.000 490 UCALPAINPATHWAY Calpains promote formation of integrin adhesion clusters which recruit Rac to enable the formation of mature focal adhesions that do not contain calpain. ACTA1, ACTN1, ACTN2, ACTN3, ARHA, CAPN1, CAPNS1, CAPNS2, ITGA1, ITGB1, ITGB3, PTK2, PXN, RAC1, SPTAN1, SRC, TLN1, VIL2 16 ACTN2(14), ACTN3(2), ITGA1(5), ITGB1(2), ITGB3(2), PTK2(7), SPTAN1(7), SRC(2), TLN1(9) 5531262 50 27 50 27 12 17 5 12 4 0 0.992 1.000 1.000 491 AMIPATHWAY Endogenous anti-thrombosis pathways are overwhelmed in plaque-narrowed blood vessels, resulting in potentially lethal myocardial infarction. ADCY1, CD3D, CD3E, CD3G, CD3Z, CD4, CREBBP, CSK, GNAS, GNB1, GNGT1, HLA-DRA, HLA-DRB1, LCK, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PTPRC, TRA@, TRB@, ZAP70 21 ADCY1(8), CD3D(1), CD4(1), CREBBP(2), GNAS(3), GNB1(1), GNGT1(1), HLA-DRA(2), LCK(5), PRKACB(2), PRKACG(1), PRKAR1B(4), PTPRC(10), ZAP70(2) 4465335 43 26 43 13 5 16 13 2 7 0 0.622 1.000 1.000 492 BLYMPHOCYTEPATHWAY B cells express the major histocompatibility complex (class II MHC), immunoglobulins, adhesion proteins, and other factors on their cell surface. CD80, CR1, CR2, FCGR2B, HLA-DRA, HLA-DRB1, ICAM1, ITGAL, ITGB2, PTPRC, TNFRSF5 10 CR1(8), CR2(4), FCGR2B(2), HLA-DRA(2), ITGAL(17), ITGB2(2), PTPRC(10) 2978739 45 26 45 14 8 16 10 3 8 0 0.683 1.000 1.000 493 CLASSICPATHWAY The classic complement pathway is initiated by antibodies and promotes phagocytosis and lysis of foreign cells as well as activating the inflammatory response. C1QA, C1QB, C1QG, C1R, C1S, C2, C3, C4A, C4B, C5, C6, C7, C8A, C9 11 C1QB(2), C1R(1), C1S(1), C2(1), C3(3), C5(1), C6(7), C7(14), C8A(2), C9(7) 3430110 39 26 38 18 8 11 9 8 3 0 0.953 1.000 1.000 494 COMPPATHWAY Both the classic and alternative immune complement pathways promote inflammation, foreign cell lysis, and phagocytosis. BF, C1QA, C1QB, C1QG, C1R, C1S, C2, C3, C4A, C4B, C5, C6, C7, C8A, C9, DF, MASP1, MASP2, MBL2 14 C1QB(2), C1R(1), C1S(1), C2(1), C3(3), C5(1), C6(7), C7(14), C8A(2), C9(7), MASP1(2), MASP2(1) 4174956 42 26 41 23 8 13 10 8 3 0 0.992 1.000 1.000 495 CSKPATHWAY Csk inhibits T-cell activation by phosphorylating Lck; Csk is regulated by cAMP-dependent kinases and is opposed by the T-cell activator CD45. ADCY1, CD3D, CD3E, CD3G, CD3Z, CD4, CREBBP, CSK, GNAS, GNB1, GNGT1, HLA-DRA, HLA-DRB1, LCK, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PTPRC, TRA@, TRB@, ZAP70 21 ADCY1(8), CD3D(1), CD4(1), CREBBP(2), GNAS(3), GNB1(1), GNGT1(1), HLA-DRA(2), LCK(5), PRKACB(2), PRKACG(1), PRKAR1B(4), PTPRC(10), ZAP70(2) 4465335 43 26 43 13 5 16 13 2 7 0 0.622 1.000 1.000 496 HSA00591_LINOLEIC_ACID_METABOLISM Genes involved in linoleic acid metabolism AKR1B10, ALOX15, ALOX5, CYP1A2, CYP2C18, CYP2C19, CYP2C8, CYP2C9, CYP2E1, CYP2J2, CYP3A4, CYP3A43, CYP3A5, CYP3A7, HSD3B7, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, RDH11, RDH12, RDH13, RDH14 31 AKR1B10(3), ALOX15(1), ALOX5(3), CYP1A2(1), CYP2C18(2), CYP2C19(5), CYP2C8(2), CYP2C9(2), CYP2E1(3), CYP2J2(8), CYP3A4(1), CYP3A43(1), CYP3A7(3), HSD3B7(2), PLA2G10(1), PLA2G12B(1), PLA2G1B(1), PLA2G2A(3), PLA2G2E(1), PLA2G2F(1), PLA2G3(4), PLA2G4A(5), PLA2G6(1) 4632261 55 26 55 24 13 20 10 6 5 1 0.881 1.000 1.000 497 NKCELLSPATHWAY Natural killer (NK) lymphocytes are inhibited by MHC and activated by surface glycoproteins on tumor or virus-infected cells, which undergo perforin-mediated lysis. B2M, HLA-A, IL18, ITGB1, KLRC1, KLRC2, KLRC3, KLRC4, KLRD1, LAT, MAP2K1, MAPK3, PAK1, PIK3CA, PIK3R1, PTK2B, PTPN6, RAC1, SYK, VAV1 20 HLA-A(1), ITGB1(2), KLRC1(1), KLRC2(2), KLRC3(3), KLRD1(1), LAT(3), MAP2K1(4), MAPK3(1), PAK1(5), PIK3CA(5), PIK3R1(1), PTK2B(6), PTPN6(2), SYK(1), VAV1(1) 3604776 39 26 38 12 10 6 10 7 6 0 0.439 1.000 1.000 498 STILBENE_COUMARINE_AND_LIGNIN_BIOSYNTHESIS EPX, GBA3, LPO, MPO, PRDX1, PRDX2, PRDX5, PRDX6, TPO, TYR 10 EPX(3), GBA3(7), LPO(2), MPO(2), PRDX2(1), PRDX5(1), PRDX6(1), TPO(9), TYR(6) 1857600 32 26 32 12 4 10 7 6 5 0 0.849 1.000 1.000 499 UREA_CYCLE_AND_METABOLISM_OF_AMINO_GROUPS ACY1, ALDH18A1, ARG1, ARG2, ASL, ASS, CKB, CKM, CKMT1, CKMT1B, CKMT1A, CKMT2, CPS1, GAMT, GATM, GLUD1, NAGS, OAT, ODC1, OTC, PYCR1, SMS 20 ARG1(1), ASL(2), CKM(1), CKMT1A(1), CKMT1B(1), CKMT2(1), CPS1(23), GATM(3), GLUD1(3), OAT(1), OTC(2), SMS(1) 3374511 40 26 40 19 6 12 12 4 6 0 0.966 1.000 1.000 500 CREMPATHWAY The transcription factor CREM activates a post-meiotic transcriptional cascade culminating in spermatogenesis. ADCY1, CREM, FHL5, FSHB, FSHR, GNAS, XPO1 7 ADCY1(8), CREM(1), FHL5(3), FSHB(1), FSHR(11), GNAS(3), XPO1(3) 1838508 30 25 30 12 3 11 7 4 5 0 0.939 1.000 1.000 501 HSA00271_METHIONINE_METABOLISM Genes involved in methionine metabolism AHCY, AMD1, BHMT, CBS, CTH, DNMT1, DNMT3A, DNMT3B, KIAA0828, MARS, MARS2, MAT1A, MAT2B, MTAP, MTFMT, MTR, SRM, TAT 17 AHCY(2), AMD1(1), BHMT(4), CBS(1), DNMT1(3), DNMT3A(6), DNMT3B(3), MARS(1), MARS2(4), MAT1A(2), MAT2B(3), MTFMT(1), MTR(6), TAT(2) 4051374 39 25 39 13 12 9 11 4 2 1 0.518 1.000 1.000 502 HSA04140_REGULATION_OF_AUTOPHAGY Genes involved in regulation of autophagy ATG12, ATG3, ATG5, ATG7, BECN1, GABARAP, GABARAPL1, IFNA1, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA2, IFNA21, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, IFNG, INS, LOC441925, PIK3C3, PIK3R4, PRKAA1, PRKAA2, ULK1, ULK2, ULK3 29 BECN1(1), IFNA10(1), IFNA14(3), IFNA16(1), IFNA17(1), IFNA2(3), IFNA21(1), IFNA4(1), IFNA6(2), IFNA7(3), IFNA8(1), IFNG(3), PIK3C3(4), PIK3R4(7), PRKAA1(1), ULK1(3), ULK3(1) 4109811 37 25 37 15 5 15 8 7 2 0 0.913 1.000 1.000 503 KREBS_TCA_CYCLE ACO2, CGI_48, CS, DLAT, DLD, DLST, DLST, DLSTP, FH, IDH2, IDH3A, IDH3B, IDH3G, KIAA1348, MDH1, MDH2, OGDH, PC, PDHA1, PDHA2, PDHB, PDHX, PDK1, PDK2, PDK3, PDK4, PDP2, PPM2C, SDHA, SDHA, SDHAL2, SDHB, SDHC, SDHD, SUCLA2, SUCLG1, SUCLG2, WDR50 30 ACO2(1), CS(1), DLAT(3), DLD(3), DLST(1), FH(1), IDH2(2), IDH3A(2), IDH3G(1), MDH1(1), PC(1), PDHA1(1), PDHA2(8), PDHX(1), PDK1(2), PDK3(1), SDHA(5), SDHD(1), SUCLG1(1), SUCLG2(2) 5487015 39 25 39 21 11 8 11 4 5 0 0.934 1.000 1.000 504 O_GLYCAN_BIOSYNTHESIS GALNT1, GALNT10, GALNT2, GALNT3, GALNT4, GALNT6, GALNT7, GALNT8, GALNT9, GCNT1, SIAT4A, SIAT4B, ST3GAL1, ST3GAL2, ST3GAL4, WBSCR17 14 GALNT1(1), GALNT10(1), GALNT2(1), GALNT3(2), GALNT4(3), GALNT6(2), GALNT7(4), GALNT8(6), GALNT9(1), GCNT1(2), ST3GAL1(2), ST3GAL2(2), ST3GAL4(1), WBSCR17(8) 2789883 36 25 36 19 11 5 12 8 0 0 0.950 1.000 1.000 505 REELINPATHWAY Reelin is secreted by neurons and recognized by receptors including cadherin related neuronal receptors, which promote phosphorylation of Dab1. CDK5, CDK5R1, DAB1, FYN, LRP8, RELN, VLDLR 7 CDK5(1), DAB1(6), FYN(2), LRP8(1), RELN(28) 2722416 38 25 38 16 3 15 6 8 6 0 0.966 1.000 1.000 506 BIOGENIC_AMINE_SYNTHESIS AANAT, ACHE, CHAT, COMT, DBH, DDC, DXYS155E, GAD1, GAD2, HDC, MAOA, PAH, PNMT, SLC18A3, TH, TPH1 15 CHAT(2), DDC(6), GAD1(4), GAD2(5), HDC(6), PAH(1), SLC18A3(5), TH(1), TPH1(10) 2815167 40 24 40 13 11 9 10 7 3 0 0.535 1.000 1.000 507 CCR5PATHWAY CCR5 is a G-protein coupled receptor expressed in macrophages that recognizes chemokine ligands and is targeted by the HIV envelope protein GP120. CALM1, CALM2, CALM3, CCL2, CCL4, CCR5, CXCL12, CXCR4, FOS, GNAQ, JUN, MAPK14, MAPK8, PLCG1, PRKCA, PRKCB1, PTK2B, SYT1 17 CALM1(1), CCL4(1), CCR5(1), CXCR4(3), GNAQ(2), MAPK14(1), MAPK8(3), PLCG1(4), PRKCA(7), PTK2B(6), SYT1(3) 2654949 32 24 32 16 9 10 9 1 3 0 0.910 1.000 1.000 508 EICOSANOID_SYNTHESIS ALOX12, ALOX15, ALOX15B, ALOX5, ALOX5AP, DPEP1, GGT1, IPLA2(GAMMA), LTA4H, LTC4S, PLA2G2A, PLA2G6, PTGDS, PTGES, PTGIS, PTGS1, PTGS2, TBXAS1 17 ALOX12(1), ALOX15(1), ALOX15B(1), ALOX5(3), DPEP1(4), GGT1(1), PLA2G2A(3), PLA2G6(1), PTGDS(2), PTGIS(1), PTGS1(3), PTGS2(4), TBXAS1(4) 2915142 29 24 29 10 5 3 11 6 4 0 0.586 1.000 1.000 509 EPOPATHWAY Erythropoietin, which activates the MAPK pathway, stimulates erythrocyte production and is an effective treatment for anemia. CSNK2A1, ELK1, EPO, EPOR, FOS, GRB2, HRAS, JAK2, JUN, MAP2K1, MAPK3, MAPK8, PLCG1, PTPN6, RAF1, SHC1, SOS1, STAT5A, STAT5B 19 EPO(1), GRB2(3), HRAS(1), JAK2(2), MAP2K1(4), MAPK3(1), MAPK8(3), PLCG1(4), PTPN6(2), RAF1(2), SHC1(2), SOS1(9), STAT5A(2), STAT5B(3) 4164894 39 24 39 13 9 8 8 9 5 0 0.544 1.000 1.000 510 IL3PATHWAY IL-3 promotes proliferation and differentiation of hematopoietic cells via a heterodimeric receptor that activates the Stat5 and MAP kinase pathways. CSF2RB, FOS, GRB2, HRAS, IL3, IL3RA, JAK2, MAP2K1, MAPK3, PTPN6, RAF1, SHC1, SOS1, STAT5A, STAT5B 15 CSF2RB(3), GRB2(3), HRAS(1), IL3(1), IL3RA(4), JAK2(2), MAP2K1(4), MAPK3(1), PTPN6(2), RAF1(2), SHC1(2), SOS1(9), STAT5A(2), STAT5B(3) 3423531 39 24 39 13 6 11 7 9 6 0 0.621 1.000 1.000 511 LYMPHOCYTEPATHWAY B and T cell lymphocytes interact with other cells via transmembrane adhesion proteins such as CD44, which interacts with endothelial cells. CD44, ICAM1, ITGA4, ITGAL, ITGB1, ITGB2, PECAM1, SELE, SELL 9 CD44(1), ITGA4(11), ITGAL(17), ITGB1(2), ITGB2(2), SELE(2), SELL(1) 2364441 36 24 36 17 6 9 8 7 6 0 0.973 1.000 1.000 512 PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS AKR1B1, DCXR, GUSB, RPE, RPE, LOC440001, UCHL1, UCHL3, UGDH, UGT1A10, UGT1A10, UGT1A8, UGT1A7, UGT1A6, UGT1A5, UGT1A9, UGT1A4, UGT1A1, UGT1A3, UGT1A6, UGT1A8, UGT1A9, UGT2B15, UGT2B4 18 AKR1B1(1), DCXR(1), GUSB(2), RPE(1), UGDH(3), UGT1A1(3), UGT1A10(3), UGT1A3(3), UGT1A4(1), UGT1A5(1), UGT1A6(2), UGT1A7(2), UGT1A9(4), UGT2B15(4), UGT2B4(6) 3430626 37 24 36 19 4 13 7 6 7 0 0.967 1.000 1.000 513 STATIN_PATHWAY_PHARMGKB ABCA1, APOA1, APOA1, LOC440837, APOA4, APOC1, APOC2, APOC3, APOC3, LOC440838, APOE, CETP, CYP7A1, DGAT1, HMGCR, LCAT, LDLR, LIPC, LPL, LRP1, SCARB1, SOAT1 18 ABCA1(7), APOA1(1), APOA4(3), APOC2(1), APOC3(2), APOE(1), CETP(1), CYP7A1(4), DGAT1(1), HMGCR(3), LCAT(1), LDLR(1), LIPC(5), LPL(2), LRP1(17), SOAT1(3) 5291967 53 24 53 21 15 14 11 9 3 1 0.835 1.000 1.000 514 ALTERNATIVEPATHWAY The alternative complement pathway is an antibody-independent mechanism of immune activation that results in cell lysis via the membrane attack complex. BF, C3, C5, C6, C7, C8A, C9, DF, PFC 6 C3(3), C5(1), C6(7), C7(14), C8A(2), C9(7) 2458224 34 23 33 12 8 11 7 5 3 0 0.804 1.000 1.000 515 CITRATE_CYCLE_TCA_CYCLE ACO1, ACO2, CS, DLD, DLST, DLSTP, FH, IDH1, IDH2, IDH3A, IDH3B, IDH3G, MDH1, MDH2, PC, PCK1, SDHA, SDHA, SDHAL2, SDHB, SUCLA2, SUCLG1, SUCLG2 20 ACO1(2), ACO2(1), CS(1), DLD(3), DLST(1), FH(1), IDH1(2), IDH2(2), IDH3A(2), IDH3G(1), MDH1(1), PC(1), PCK1(8), SDHA(5), SUCLG1(1), SUCLG2(2) 3963138 34 23 34 12 11 6 7 5 5 0 0.527 1.000 1.000 516 CTLA4PATHWAY T cell activation requires interaction with an antigen-MHC-I complex on an antigen-presenting cell (APC), as well as CD28 interaction with the APC's CD80 or 86. CD28, CD3D, CD3E, CD3G, CD3Z, CD80, CD86, CTLA4, GRB2, HLA-DRA, HLA-DRB1, ICOS, ICOSL, IL2, ITK, LCK, PIK3CA, PIK3R1, PTPN11, TRA@, TRB@ 17 CD28(1), CD3D(1), CD86(2), CTLA4(1), GRB2(3), HLA-DRA(2), IL2(3), ITK(4), LCK(5), PIK3CA(5), PIK3R1(1), PTPN11(1) 2466480 29 23 28 11 2 10 10 4 3 0 0.862 1.000 1.000 517 ERK5PATHWAY Signaling between a tissue and its innervating axon stimulates retrograde transport via Trk receptors, which activate Erk5, which induces transcription of anti-apoptotic factors. AKT1, CREB1, GRB2, HRAS, MAPK1, MAPK3, MAPK7, MEF2A, MEF2B, MEF2C, MEF2D, NTRK1, PIK3CA, PIK3R1, PLCG1, RPS6KA1, SHC1 17 GRB2(3), HRAS(1), MAPK3(1), MAPK7(4), MEF2C(1), MEF2D(1), NTRK1(6), PIK3CA(5), PIK3R1(1), PLCG1(4), SHC1(2) 3691335 29 23 28 11 5 6 10 6 2 0 0.743 1.000 1.000 518 HSA00533_KERATAN_SULFATE_BIOSYNTHESIS Genes involved in keratan sulfate biosynthesis B3GNT1, B3GNT2, B3GNT7, B4GALT1, B4GALT2, B4GALT3, B4GALT4, CHST1, CHST2, CHST4, CHST6, FUT8, ST3GAL1, ST3GAL2, ST3GAL3, ST3GAL4 16 B3GNT1(3), B3GNT2(1), B4GALT1(1), B4GALT2(2), B4GALT3(1), B4GALT4(1), CHST1(8), CHST2(4), FUT8(4), ST3GAL1(2), ST3GAL2(2), ST3GAL3(1), ST3GAL4(1) 2417073 31 23 30 17 11 5 9 2 4 0 0.942 1.000 1.000 519 HSA00604_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GANGLIOSERIES Genes involved in glycosphingolipid biosynthesis - ganglioseries B3GALT4, B4GALNT1, GLB1, HEXA, HEXB, LCT, SLC33A1, ST3GAL1, ST3GAL2, ST3GAL5, ST6GALNAC3, ST6GALNAC4, ST6GALNAC5, ST6GALNAC6, ST8SIA1, ST8SIA5 16 B4GALNT1(2), HEXA(1), LCT(12), SLC33A1(1), ST3GAL1(2), ST3GAL2(2), ST6GALNAC3(8), ST6GALNAC5(1), ST6GALNAC6(1), ST8SIA5(2) 3181269 32 23 32 10 5 6 12 5 4 0 0.576 1.000 1.000 520 HSA00940_PHENYLPROPANOID_BIOSYNTHESIS Genes involved in phenylpropanoid biosynthesis EPX, GBA, GBA3, LPO, MPO, PRDX6, TPO 7 EPX(3), GBA(3), GBA3(7), LPO(2), MPO(2), PRDX6(1), TPO(9) 1615596 27 23 27 10 2 11 6 3 5 0 0.840 1.000 1.000 521 HSA04614_RENIN_ANGIOTENSIN_SYSTEM Genes involved in renin-angiotensin system ACE, ACE2, AGT, AGTR1, AGTR2, ANPEP, CMA1, CPA3, CTSA, CTSG, ENPEP, LNPEP, MAS1, MME, NLN, REN, THOP1 17 ACE(7), ACE2(3), AGTR1(1), AGTR2(2), ANPEP(3), CMA1(3), CPA3(4), CTSG(1), ENPEP(4), LNPEP(1), MAS1(2), MME(2), NLN(2), THOP1(2) 4118325 37 23 37 23 5 8 17 2 5 0 0.993 1.000 1.000 522 MEF2DPATHWAY Mef2 transcription factors promote calcium-induced apoptosis in T cells and are regulated by MAP kinases and histone deacetylases. CABIN1, CALM1, CALM2, CALM3, CAPN2, CAPNS1, CAPNS2, EP300, HDAC1, HDAC2, MEF2D, NFATC1, NFATC2, PPP3CA, PPP3CB, PPP3CC, PRKCA, PRKCB1, SYT1, TRA@, TRB@ 18 CABIN1(2), CALM1(1), EP300(1), HDAC1(1), HDAC2(6), MEF2D(1), NFATC1(1), NFATC2(5), PPP3CA(2), PPP3CB(1), PPP3CC(1), PRKCA(7), SYT1(3) 4712370 32 23 32 12 6 14 8 1 3 0 0.728 1.000 1.000 523 PTENPATHWAY PTEN suppresses AKT-induced cell proliferation and antagonizes the action of PI3K. AKT1, BCAR1, CDKN1B, FOXO3A, GRB2, ILK, ITGB1, MAPK1, MAPK3, PDK2, PDPK1, PIK3CA, PIK3R1, PTEN, PTK2, SHC1, SOS1, TNFSF6 16 BCAR1(1), CDKN1B(2), GRB2(3), ITGB1(2), MAPK3(1), PIK3CA(5), PIK3R1(1), PTEN(3), PTK2(7), SHC1(2), SOS1(9) 3745257 36 23 34 11 4 12 7 8 5 0 0.683 1.000 1.000 524 41BBPATHWAY TNF-type receptor 4-1BB is bound by TRAF1 to activate the MAP kinase pathway in activated T cells. ATF2, CHUK, IFNG, IKBKB, IL2, IL4, JUN, MAP3K1, MAP3K5, MAP4K5, MAPK14, MAPK8, NFKB1, NFKBIA, RELA, TNFRSF9, TNFSF9, TRAF2 18 ATF2(2), CHUK(1), IFNG(3), IKBKB(2), IL2(3), MAP3K1(3), MAP3K5(8), MAP4K5(1), MAPK14(1), MAPK8(3), NFKB1(2), TNFRSF9(2) 3754803 31 22 31 10 6 7 8 2 8 0 0.642 1.000 1.000 525 ALANINE_AND_ASPARTATE_METABOLISM AARS, ABAT, ADSL, ADSS, AGXT, AGXT2, ASL, ASNS, ASPA, ASS, CAD, CRAT, DARS, DDO, GAD1, GAD2, GOT1, GOT2, GPT, GPT2, NARS, PC 21 AARS(1), ABAT(1), AGXT(2), AGXT2(6), ASL(2), ASNS(2), ASPA(1), CAD(9), DDO(2), GAD1(4), GAD2(5), GOT1(2), GOT2(3), GPT2(2), NARS(2), PC(1) 5067249 45 22 45 17 12 12 13 5 3 0 0.666 1.000 1.000 526 C21_STEROID_HORMONE_METABOLISM AKR1C4, AKR1D1, CYP11A1, CYP11B1, CYP11B2, CYP17A1, CYP21A2, HSD11B1, HSD11B2, HSD3B1, HSD3B2 11 AKR1C4(1), AKR1D1(2), CYP11B1(3), CYP11B2(6), CYP17A1(2), HSD11B1(2), HSD11B2(1), HSD3B1(7), HSD3B2(12) 1831413 36 22 36 13 5 14 7 6 4 0 0.744 1.000 1.000 527 CHREBPPATHWAY Carbohydrate responsive element binding protein (chREBP) is a transcription factor inhibited by cAMP and activated by high carbohydrate levels. ADCY1, BG1, BUCS1, GNAS, GNB1, GNGT1, PPP2CA, PRKAA1, PRKAA2, PRKAB1, PRKAB2, PRKACB, PRKACG, PRKAG1, PRKAG2, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, WBSCR14 17 ADCY1(8), GNAS(3), GNB1(1), GNGT1(1), PRKAA1(1), PRKAB1(3), PRKACB(2), PRKACG(1), PRKAG2(4), PRKAR1B(4) 2964678 28 22 28 11 3 11 7 2 5 0 0.876 1.000 1.000 528 FRUCTOSE_AND_MANNOSE_METABOLISM AKR1B1, ALDOA, ALDOB, ALDOC, FBP1, FBP2, FPGT, GCK, GMDS, GMPPA, GMPPB, HK1, HK2, HK3, KHK, MPI, PFKFB1, PFKFB3, PFKFB4, PFKM, PFKP, PMM1, PMM2, SORD, TPI1 25 AKR1B1(1), ALDOA(1), ALDOB(2), ALDOC(1), FPGT(1), GCK(1), GMDS(3), GMPPA(1), GMPPB(1), HK1(3), HK2(5), HK3(5), KHK(1), PFKFB1(2), PFKFB3(4), PFKFB4(3), PFKM(2), PFKP(3), PMM1(1), SORD(1), TPI1(3) 4683732 45 22 44 16 13 15 9 6 2 0 0.604 1.000 1.000 529 HSA00100_BIOSYNTHESIS_OF_STEROIDS Genes involved in biosynthesis of steroids CYP27B1, CYP51A1, DHCR24, DHCR7, EBP, FDFT1, FDPS, GGCX, GGPS1, HMGCR, HSD17B7, IDI1, IDI2, LSS, MVD, MVK, NQO1, NSDHL, PMVK, SC4MOL, SC5DL, SQLE, TM7SF2, VKORC1 24 CYP27B1(2), CYP51A1(3), DHCR24(1), DHCR7(1), EBP(1), FDFT1(1), FDPS(1), GGCX(1), GGPS1(1), HMGCR(3), IDI1(1), LSS(3), MVD(1), NQO1(3), NSDHL(1), SC4MOL(1), SC5DL(2), TM7SF2(5), VKORC1(1) 3765897 33 22 33 12 5 11 10 4 3 0 0.715 1.000 1.000 530 HSA00140_C21_STEROID_HORMONE_METABOLISM Genes involved in C21-steroid hormone metabolism AKR1C4, AKR1D1, CYP11A1, CYP11B1, CYP11B2, CYP17A1, CYP21A2, HSD11B1, HSD11B2, HSD3B1, HSD3B2 11 AKR1C4(1), AKR1D1(2), CYP11B1(3), CYP11B2(6), CYP17A1(2), HSD11B1(2), HSD11B2(1), HSD3B1(7), HSD3B2(12) 1831413 36 22 36 13 5 14 7 6 4 0 0.744 1.000 1.000 531 METHIONINE_METABOLISM AHCY, BHMT, CBS, CTH, DNMT1, DNMT2, DNMT3A, DNMT3B, MARS, MARS2, MAT1A, MAT2B, MTR 12 AHCY(2), BHMT(4), CBS(1), DNMT1(3), DNMT3A(6), DNMT3B(3), MARS(1), MARS2(4), MAT1A(2), MAT2B(3), MTR(6) 3391152 35 22 35 11 10 8 11 3 2 1 0.448 1.000 1.000 532 MPRPATHWAY Progesterone binding to its intracellular receptor activates the MAPK pathway and induces oocyte maturation; binding to membrane receptor inhibits adenylyl cyclase. ACTA1, ADCY1, CAP1, CCNB1, CDC2, CDC25C, GNAI1, GNAS, GNB1, GNGT1, HRAS, MAPK1, MAPK3, MYT1, PIN1, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, RPS6KA1, SRC 22 ADCY1(8), CCNB1(1), GNAI1(1), GNAS(3), GNB1(1), GNGT1(1), HRAS(1), MAPK3(1), MYT1(5), PRKACB(2), PRKACG(1), PRKAR1B(4), SRC(2) 3960558 31 22 31 15 6 10 7 3 5 0 0.960 1.000 1.000 533 SA_PTEN_PATHWAY PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. AKT1, AKT2, AKT3, BPNT1, GRB2, ILK, MAPK1, MAPK3, PDK1, PIK3CA, PIK3CD, PIP3-E, PTEN, PTK2B, RBL2, SHC1, SOS1 16 AKT2(1), AKT3(2), BPNT1(1), GRB2(3), MAPK3(1), PDK1(2), PIK3CA(5), PTEN(3), PTK2B(6), RBL2(1), SHC1(2), SOS1(9) 3945594 36 22 34 14 8 8 11 7 2 0 0.797 1.000 1.000 534 AMINOACYL_TRNA_BIOSYNTHESIS AARS, CARS, DARS, EPRS, FARS2, FARSLB, GARS, HARS, HARSL, IARS, KARS, LARS, LARS2, MARS, MARS2, NARS, QARS, RARS, SARS, TARS, WARS, WARS2, YARS 21 AARS(1), CARS(1), EPRS(9), FARS2(1), GARS(3), HARS(2), IARS(3), KARS(3), LARS(3), LARS2(1), MARS(1), MARS2(4), NARS(2), QARS(2), RARS(4), TARS(3), WARS(2), WARS2(8), YARS(1) 6208254 54 21 54 16 11 23 9 8 3 0 0.608 1.000 1.000 535 ETSPATHWAY The Ets transcription factors are activated by Ras and promote macrophage differentiation. CSF1, CSF1R, DDX20, E2F1, E2F4, ETS1, ETS2, ETV3, FOS, HDAC2, HDAC5, HRAS, JUN, NCOR2, RBL1, RBL2, SIN3A, SIN3B 18 CSF1(1), CSF1R(3), DDX20(1), ETS1(1), ETS2(1), HDAC2(6), HDAC5(2), HRAS(1), NCOR2(6), RBL1(4), RBL2(1), SIN3A(4) 5041578 31 21 31 14 6 6 11 5 3 0 0.879 1.000 1.000 536 HSA00531_GLYCOSAMINOGLYCAN_DEGRADATION Genes involved in glycosaminoglycan degradation ARSB, GALNS, GLB1, GNS, GUSB, HEXA, HEXB, HGSNAT, HPSE, HPSE2, HYAL1, HYAL2, IDS, IDUA, LCT, NAGLU, SPAM1 17 ARSB(1), GUSB(2), HEXA(1), HGSNAT(2), HPSE2(4), HYAL1(1), IDS(2), IDUA(1), LCT(12), NAGLU(1), SPAM1(4) 3972297 31 21 31 15 5 9 8 4 5 0 0.929 1.000 1.000 537 HSA00532_CHONDROITIN_SULFATE_BIOSYNTHESIS Genes involved in chondroitin sulfate biosynthesis B3GALT6, B3GAT1, B3GAT2, B3GAT3, B4GALT7, ChGn, CHPF, CHST11, CHST12, CHST13, CHST14, CHST3, CHST7, CHSY-2, CHSY1, CSGlcA-T, DSE, GALNAC4S-6ST, GALNACT-2, UST, XYLT1, XYLT2 15 B3GAT1(1), B3GAT2(1), B3GAT3(1), CHPF(1), CHST12(3), CHST13(2), CHST3(1), CHSY1(1), DSE(2), UST(1), XYLT1(13) 2657529 27 21 27 10 4 6 10 4 3 0 0.620 1.000 1.000 538 HSA00632_BENZOATE_DEGRADATION_VIA_COA_LIGATION Genes involved in benzoate degradation via CoA ligation ACAT1, ACAT2, ACOT11, ACYP1, ACYP2, ARD1A, CARKL, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, ECHS1, EHHADH, ESCO1, ESCO2, FN3K, GCDH, HADHA, ITGB1BP3, LYCAT, MYST3, MYST4, NAT5, NAT6, PNPLA3, SH3GLB1, YOD1 24 ACAT1(1), ACOT11(1), ACYP2(1), DHRS2(2), DHRS3(1), EHHADH(3), ESCO1(5), ESCO2(2), GCDH(1), HADHA(2), ITGB1BP3(2), MYST3(7), MYST4(6), PNPLA3(1), SH3GLB1(1), YOD1(1) 5027904 37 21 37 12 5 13 7 4 7 1 0.694 1.000 1.000 539 METHANE_METABOLISM ADH5, ATP6V0C, SHMT1, CAT, EPX, LPO, MPO, PRDX1, PRDX2, PRDX5, PRDX6, SHMT1, SHMT2, TPO 13 ADH5(3), CAT(3), EPX(3), LPO(2), MPO(2), PRDX2(1), PRDX5(1), PRDX6(1), SHMT1(2), SHMT2(1), TPO(9) 2283300 28 21 28 11 3 12 5 4 4 0 0.836 1.000 1.000 540 NEUTROPHILPATHWAY Neutrophils are phagocytotic leukocytes that destroy foreign cells with reactive oxygen species or enzymatic digestion and express CD11 and CD18. CD44, ICAM1, ITGAL, ITGAM, ITGB2, PECAM1, SELE, SELL 8 CD44(1), ITGAL(17), ITGAM(9), ITGB2(2), SELE(2), SELL(1) 2037942 32 21 32 13 7 9 9 3 4 0 0.802 1.000 1.000 541 PENTOSE_PHOSPHATE_PATHWAY ALDOA, ALDOB, ALDOC, FBP1, FBP2, G6PD, GPI, H6PD, PFKM, PFKP, PGD, PGLS, PGM1, PGM3, PRPS1, PRPS1L1, PRPS2, RBKS, RPE, RPE, LOC440001, RPIA, TAL1, TALDO1, TALDO1, HSUP1, TKT 23 ALDOA(1), ALDOB(2), ALDOC(1), G6PD(2), GPI(3), H6PD(3), PFKM(2), PFKP(3), PGD(1), PGM1(2), PGM3(2), PRPS1(3), PRPS1L1(2), PRPS2(1), RPE(1), RPIA(2), TAL1(2) 3971523 33 21 33 13 9 7 8 8 1 0 0.749 1.000 1.000 542 HSA00670_ONE_CARBON_POOL_BY_FOLATE Genes involved in one carbon pool by folate ALDH1L1, AMT, ATIC, DHFR, FTCD, GART, MTFMT, MTHFD1, MTHFD1L, MTHFD2, MTHFR, MTHFS, MTR, SHMT1, SHMT2, TYMS 16 ALDH1L1(4), AMT(2), ATIC(2), FTCD(2), GART(1), MTFMT(1), MTHFD1(1), MTHFD1L(4), MTHFR(1), MTR(6), SHMT1(2), SHMT2(1) 3685530 27 20 27 14 9 7 5 1 4 1 0.933 1.000 1.000 543 HSA00680_METHANE_METABOLISM Genes involved in methane metabolism ADH5, CAT, EPX, LPO, MPO, MTHFR, PRDX6, SHMT1, SHMT2, TPO 10 ADH5(3), CAT(3), EPX(3), LPO(2), MPO(2), MTHFR(1), PRDX6(1), SHMT1(2), SHMT2(1), TPO(9) 2248728 27 20 27 11 3 11 6 3 4 0 0.852 1.000 1.000 544 HSA00760_NICOTINATE_AND_NICOTINAMIDE_METABOLISM Genes involved in nicotinate and nicotinamide metabolism AOX1, BST1, C9orf95, CD38, ENPP1, ENPP3, NADK, NADSYN1, NMNAT1, NMNAT2, NMNAT3, NNMT, NNT, NP, NT5C, NT5C1A, NT5C1B, NT5C2, NT5C3, NT5E, NT5M, NUDT12, PBEF1, QPRT 22 AOX1(6), CD38(1), ENPP1(3), ENPP3(5), NMNAT1(1), NNMT(3), NNT(4), NT5C1A(2), NT5C1B(1), NT5C3(1), NT5E(1), NT5M(1), NUDT12(1) 4187340 30 20 30 13 4 14 8 1 3 0 0.883 1.000 1.000 545 IL12PATHWAY IL12 and Stat4 Dependent Signaling Pathway in Th1 Development CCR5, CD3D, CD3E, CD3G, CD3Z, CXCR3, ETV5, IFNG, IL12A, IL12B, IL12RB1, IL12RB2, IL18, IL18R1, JAK2, JUN, MAP2K6, MAPK14, MAPK8, STAT4, TRA@, TRB@, TYK2 20 CCR5(1), CD3D(1), CXCR3(1), ETV5(2), IFNG(3), IL12A(2), IL12RB1(2), IL12RB2(6), JAK2(2), MAPK14(1), MAPK8(3), STAT4(5), TYK2(2) 3610710 31 20 31 19 3 8 8 3 9 0 0.995 1.000 1.000 546 NTHIPATHWAY Hemophilus influenzae infections activate NF-kB via several pathways, inducing the inflammatory response. CHUK, CREBBP, DUSP1, EP300, IKBKB, IL1B, IL8, MADH3, MADH4, MAP2K3, MAP2K6, MAP3K14, MAP3K7, MAPK11, MAPK14, MYD88, NFKB1, NFKBIA, NR3C1, RELA, TGFBR1, TGFBR2, TLR2, TNF 22 CHUK(1), CREBBP(2), EP300(1), IKBKB(2), MAP2K3(3), MAP3K14(1), MAP3K7(3), MAPK14(1), MYD88(2), NFKB1(2), NR3C1(1), TGFBR1(2) 5732631 21 20 21 12 2 3 8 2 6 0 0.976 1.000 1.000 547 PTDINSPATHWAY Phosphoinositide 3 kinase (PI3K) phosphorylate inositol rings of phosphoinositide lipids, influencing vesicle trafficking, cell proliferation, and migration. AKT1, AP2A1, AP2M1, ARF1, BAD, BTK, EEA1, GRASP, GSK3A, GSK3B, LYN, PDPK1, PFKL, PFKM, PFKP, PFKX, PLCG1, PRKCE, PRKCZ, RAB5A, RAC1, RPS6KB1, VAV2 22 AP2A1(1), AP2M1(3), BTK(7), EEA1(2), GSK3B(1), LYN(3), PFKL(1), PFKM(2), PFKP(3), PLCG1(4), PRKCE(1), RAB5A(1), VAV2(2) 4836210 31 20 31 12 9 6 10 4 2 0 0.728 1.000 1.000 548 RARRXRPATHWAY RXR and RAR suppress transcription in the absence of ligand and, on binding trans- or 9-cis-retinoic acid, are ubiquitinated to allow transcription to proceed. ERCC3, GTF2A1, GTF2B, GTF2E1, GTF2F1, HDAC3, NCOA1, NCOA2, NCOA3, NCOR2, PCAF, POLR2A, RARA, RXRA, TBP 14 ERCC3(4), GTF2A1(3), GTF2B(1), GTF2E1(2), GTF2F1(1), HDAC3(1), NCOA1(4), NCOA2(4), NCOA3(6), NCOR2(6), POLR2A(6), RARA(2) 4827567 40 20 40 14 12 13 7 7 1 0 0.674 1.000 1.000 549 RASPATHWAY Ras activation stimulates many signaling cascades, including PI3K/AKT activation to inhibit apoptosis. AKT1, ARHA, BAD, BCL2L1, CASP9, CDC42, CHUK, ELK1, H2AFX, HRAS, MAP2K1, MAPK3, MLLT7, NFKB1, PIK3CA, PIK3R1, RAC1, RAF1, RALA, RALBP1, RALGDS, RELA, RHOA 21 CASP9(2), CDC42(2), CHUK(1), HRAS(1), MAP2K1(4), MAPK3(1), NFKB1(2), PIK3CA(5), PIK3R1(1), RAF1(2), RALA(2), RALBP1(1), RHOA(1) 3694689 25 20 24 10 6 5 5 6 3 0 0.780 1.000 1.000 550 SHHPATHWAY Sonic hedgehog (Shh) signaling in the developing CNS induces neuronal proliferation via interaction with the patched (Ptc-1) and smoothened receptors. DYRK1A, DYRK1B, GLI, GLI2, GLI3, GSK3B, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PTCH, SHH, SMO, SUFU 14 DYRK1A(2), DYRK1B(1), GLI2(4), GLI3(6), GSK3B(1), PRKACB(2), PRKACG(1), PRKAR1B(4), SHH(3), SMO(4) 3271956 28 20 28 11 6 9 5 4 4 0 0.786 1.000 1.000 551 SMALL_LIGAND_GPCRS C9orf47, CNR1, CNR2, DNMT1, EDG1, EDG2, EDG5, EDG6, MTNR1A, MTNR1B, PTAFR, PTGDR, PTGER1, PTGER2, PTGER4, PTGFR, PTGIR, TBXA2R 13 CNR1(3), CNR2(1), DNMT1(3), MTNR1A(3), MTNR1B(5), PTAFR(2), PTGER2(1), PTGER4(4), PTGFR(5), PTGIR(1) 2194806 28 20 28 11 5 7 10 6 0 0 0.670 1.000 1.000 552 STRESSPATHWAY Tumor necrosis factor receptor TNFR1 promotes apoptosis and activates the pro-inflammatory NF-kB, while TNFR2 activates stress-activated protein kinases (SAPKs). ATF1, CASP2, CHUK, CRADD, IKBKB, IKBKG, JUN, LTA, MAP2K3, MAP2K4, MAP2K6, MAP3K1, MAP3K14, MAP4K2, MAPK14, MAPK8, NFKB1, NFKBIA, RELA, RIPK1, TANK, TNF, TNFRSF1A, TRADD, TRAF2 24 CASP2(2), CHUK(1), IKBKB(2), MAP2K3(3), MAP2K4(2), MAP3K1(3), MAP3K14(1), MAPK14(1), MAPK8(3), NFKB1(2), RIPK1(3), TANK(2) 4697019 25 20 25 12 3 8 7 1 6 0 0.937 1.000 1.000 553 TH1TH2PATHWAY Helper T subtype Th1 produces pro-inflammatory cytokines that stimulate phagocytosis, while Th2 cells promote antibody production and activate eosinophils. CD28, CD86, HLA-DRA, HLA-DRB1, IFNG, IFNGR1, IFNGR2, IL12A, IL12B, IL12RB1, IL12RB2, IL18, IL18R1, IL2, IL2RA, IL4, IL4R, TNFRSF5, TNFSF5 17 CD28(1), CD86(2), HLA-DRA(2), IFNG(3), IFNGR1(3), IFNGR2(2), IL12A(2), IL12RB1(2), IL12RB2(6), IL2(3), IL2RA(3), IL4R(5) 2455902 34 20 33 14 7 6 11 4 6 0 0.799 1.000 1.000 554 THELPERPATHWAY Helper T cells coordinate the actions of B cells, macrophages, and other immune cells via surface molecules such as T cell receptor/CD3 and their characteristic marker CD4. CD2, CD28, CD3D, CD3E, CD3G, CD3Z, CD4, ICAM1, ITGAL, ITGB2, PTPRC, THY1, TRA@, TRB@ 11 CD2(2), CD28(1), CD3D(1), CD4(1), ITGAL(17), ITGB2(2), PTPRC(10) 2190162 34 20 34 12 8 11 7 2 6 0 0.657 1.000 1.000 555 UREACYCLEPATHWAY Ammonia released from amino acid deamination is used to produce carbamoyl phosphate, which is used to convert ornithine to citrulline, from which urea is eventually formed. ARG1, ASL, ASS, CPS1, GLS, GLUD1, GOT1 6 ARG1(1), ASL(2), CPS1(23), GLS(1), GLUD1(3), GOT1(2) 1508397 32 20 32 14 5 8 10 4 5 0 0.935 1.000 1.000 556 ACHPATHWAY Nicotinic acetylcholine receptors are ligand-gated ion channels that primarily mediate neuromuscular signaling and may inhibit neuronal apoptosis via the AKT pathway. AKT1, BAD, CHRNB1, CHRNG, FOXO3A, MUSK, PIK3CA, PIK3R1, PTK2, PTK2B, RAPSN, SRC, TERT, TNFSF6, YWHAH 13 CHRNB1(3), CHRNG(1), MUSK(4), PIK3CA(5), PIK3R1(1), PTK2(7), PTK2B(6), RAPSN(1), SRC(2), TERT(2) 3149793 32 19 31 13 8 8 8 5 3 0 0.756 1.000 1.000 557 ACTINYPATHWAY The Arp 2/3 complex localizes to the Y-junction of polymerizing actin fibers that enable lamellipod extension and consequent cell motility. ABI-2, ACTA1, ACTR2, ACTR3, ARPC1A, ARPC1B, ARPC2, ARPC3, ARPC4, NCK1, NCKAP1, NTRK1, PIR, PSMA7, RAC1, WASF1, WASF2, WASF3, WASL 18 ACTR2(1), ACTR3(1), ARPC1B(1), ARPC2(1), ARPC3(1), NCK1(1), NCKAP1(2), NTRK1(6), PIR(2), WASF1(4), WASF3(2), WASL(4) 2968161 26 19 26 11 2 10 6 3 5 0 0.955 1.000 1.000 558 CDC42RACPATHWAY PI3 kinase stimulates cell migration by activating cdc42, which activates ARP2/3, which in turn promotes formation of new actin fibers. ACTR2, ACTR3, ARHA, ARPC1A, ARPC1B, ARPC2, ARPC3, ARPC4, CDC42, PAK1, PDGFRA, PIK3CA, PIK3R1, RAC1, WASL 14 ACTR2(1), ACTR3(1), ARPC1B(1), ARPC2(1), ARPC3(1), CDC42(2), PAK1(5), PDGFRA(7), PIK3CA(5), PIK3R1(1), WASL(4) 2592384 29 19 28 13 5 8 10 3 3 0 0.953 1.000 1.000 559 IL4PATHWAY IL-4 promotes Th2 cell differentiation via a heterodimeric receptor that activates Stat6/JAK and MAP kinase pathways. AKT1, GRB2, IL2RG, IL4, IL4R, IRS1, JAK1, JAK3, RPS6KB1, SHC1, STAT6 11 GRB2(3), IL4R(5), IRS1(12), JAK1(5), JAK3(3), SHC1(2), STAT6(1) 2872314 31 19 31 11 8 6 7 9 1 0 0.617 1.000 1.000 560 IRINOTECAN_PATHWAY_PHARMGKB ABCC1, ABCC2, ABCG2, BCHE, CES1, CES2, CES4, CYP3A4, CYP3A5, UGT1A10, UGT1A8, UGT1A7, UGT1A6, UGT1A5, UGT1A9, UGT1A4, UGT1A1, UGT1A3, UGT1A6 17 ABCC1(3), ABCC2(5), ABCG2(3), BCHE(3), CES1(1), CYP3A4(1), UGT1A1(3), UGT1A10(3), UGT1A3(3), UGT1A4(1), UGT1A5(1), UGT1A6(2), UGT1A7(2), UGT1A9(4) 4405350 35 19 35 24 9 13 4 5 4 0 0.997 1.000 1.000 561 NO2IL12PATHWAY Macrophages activate NK cells by releasing IL-12, which induces NK cytotoxic activity in coordination with NO produced by inducible nitric oxide synthase II. CCR5, CD2, CD3D, CD3E, CD3G, CD3Z, CD4, CXCR3, IFNG, IL12A, IL12B, IL12RB1, IL12RB2, JAK2, NOS2A, STAT4, TYK2 15 CCR5(1), CD2(2), CD3D(1), CD4(1), CXCR3(1), IFNG(3), IL12A(2), IL12RB1(2), IL12RB2(6), JAK2(2), STAT4(5), TYK2(2) 2852061 28 19 28 14 3 7 7 3 8 0 0.951 1.000 1.000 562 ST_TUMOR_NECROSIS_FACTOR_PATHWAY Tumor necrosis factor is a pro-inflammatory cytokine that activates NF-kB and c-Jun. BAG4, BIRC2, BIRC3, CASP3, CASP8, CFLAR, FADD, HRB, IKBKG, JUN, MAP2K4, MAP3K3, MAP3K7, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, NR2C2, RALBP1, RIPK1, TNF, TNFAIP3, TNFRSF1A, TNFRSF1B, TRADD, TRAF2 27 BIRC2(2), BIRC3(2), CASP3(4), CASP8(3), CFLAR(1), MAP2K4(2), MAP3K3(2), MAP3K7(3), NFKB1(2), NFKB2(3), NFKBIE(1), NR2C2(1), RALBP1(1), RIPK1(3), TNFRSF1B(1) 5279712 31 19 31 10 8 7 7 3 6 0 0.551 1.000 1.000 563 TCYTOTOXICPATHWAY Cytotoxic T cells release perforin and granzyme to lyse foreign cell targets and express Fas ligand to promote Fas-induced apoptosis. CD2, CD28, CD3D, CD3E, CD3G, CD3Z, CD8A, ICAM1, ITGAL, ITGB2, PTPRC, THY1, TRA@, TRB@ 11 CD2(2), CD28(1), CD3D(1), CD8A(1), ITGAL(17), ITGB2(2), PTPRC(10) 2086962 34 19 34 12 8 10 8 2 6 0 0.647 1.000 1.000 564 GATA3PATHWAY GATA-3 is a transcription factor that promotes differentiation of helper T cells into Th2 cells, which secrete cytokines IL4, IL5, and IL13. GATA3, IL13, IL4, IL5, JUNB, MAF, MAP2K3, MAPK14, NFATC1, NFATC2, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B 16 GATA3(5), MAF(1), MAP2K3(3), MAPK14(1), NFATC1(1), NFATC2(5), PRKACB(2), PRKACG(1), PRKAR1B(4) 2368053 23 18 22 10 3 9 4 1 6 0 0.793 1.000 1.000 565 GCRPATHWAY Corticosteroids activate the glucocorticoid receptor (GR), which inhibits NF-kB and activates Annexin-1, thus inhibiting the inflammatory response. ADRB2, AKT1, ANXA1, CALM1, CALM2, CALM3, CRN, GNAS, GNB1, GNGT1, HSPCA, NFKB1, NOS3, NPPA, NR3C1, PIK3CA, PIK3R1, RELA, SYT1 17 ANXA1(2), CALM1(1), GNAS(3), GNB1(1), GNGT1(1), NFKB1(2), NOS3(1), NPPA(1), NR3C1(1), PIK3CA(5), PIK3R1(1), SYT1(3) 3460554 22 18 21 12 3 8 7 2 2 0 0.970 1.000 1.000 566 HSA00061_FATTY_ACID_BIOSYNTHESIS Genes involved in fatty acid biosynthesis ACACA, ACACB, FASN, MCAT, OLAH, OXSM 6 ACACA(8), ACACB(7), FASN(1), OLAH(5), OXSM(5) 3092775 26 18 26 15 5 12 5 1 3 0 0.983 1.000 1.000 567 HSA00563_GLYCOSYLPHOSPHATIDYLINOSITOL_ANCHOR_BIOSYNTHESIS Genes involved in glycosylphosphatidylinositol(GPI)-anchor biosynthesis GPAA1, GPLD1, PGAP1, PIGA, PIGB, PIGC, PIGF, PIGG, PIGH, PIGK, PIGL, PIGM, PIGN, PIGO, PIGP, PIGQ, PIGS, PIGT, PIGU, PIGV, PIGW, PIGX, PIGZ 23 GPAA1(1), GPLD1(1), PGAP1(2), PIGB(1), PIGC(1), PIGG(5), PIGM(4), PIGN(1), PIGO(4), PIGQ(1), PIGS(1), PIGT(1), PIGV(2), PIGW(1), PIGX(1), PIGZ(1) 4649934 28 18 28 12 7 3 11 4 3 0 0.797 1.000 1.000 568 MITOCHONDRIAL_FATTY_ACID_BETAOXIDATION ACADL, ACADM, ACADS, ACADVL, ACSL1, ACSL3, ACSL4, CPT1A, CPT2, DCI, EHHADH, HADHA, HADHSC, MGC5139, PECR, SCP2, SLC25A20 15 ACADM(3), ACSL1(4), ACSL3(1), ACSL4(1), CPT1A(5), CPT2(2), DCI(2), EHHADH(3), HADHA(2), PECR(1), SCP2(3), SLC25A20(2) 3241641 29 18 29 13 4 11 4 6 3 1 0.914 1.000 1.000 569 ONE_CARBON_POOL_BY_FOLATE ALDH1L1, AMT, ATIC, ATP6V0C, SHMT1, DHFR, GART, MTHFD1, MTHFD1L, MTHFD2, MTHFR, MTHFS, MTR, SHMT1, SHMT2, TYMS 15 ALDH1L1(4), AMT(2), ATIC(2), GART(1), MTHFD1(1), MTHFD1L(4), MTHFR(1), MTR(6), SHMT1(2), SHMT2(1) 3473712 24 18 24 13 8 6 4 1 4 1 0.946 1.000 1.000 570 PHOTOSYNTHESIS ATP5E, ATP5O, ATP6AP1, ATP6V0A1, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0C, SHMT1, ATP6V0D1, ATP6V0E, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H, FDXR 22 ATP6V0A1(1), ATP6V0A4(4), ATP6V0B(1), ATP6V0D1(1), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(2), ATP6V1C1(3), ATP6V1C2(2), ATP6V1D(1), ATP6V1G1(1), ATP6V1H(2), FDXR(2), SHMT1(2) 3107610 29 18 29 10 9 6 8 4 2 0 0.623 1.000 1.000 571 PLCEPATHWAY Gs-coupled receptors activate adenylyl cyclase, which activates Epac1, leading to the stimulation of PLC and subsequent DAG and IP3 production. ADCY1, ADRB2, GNAS, PLCE1, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PTGER1, RAP2B 11 ADCY1(8), GNAS(3), PLCE1(8), PRKACB(2), PRKACG(1), PRKAR1B(4) 2846127 26 18 26 11 2 12 6 3 3 0 0.906 1.000 1.000 572 CFTRPATHWAY The cAMP-regulated chloride channel CFTR (deficient in cystic fibrosis) is regulated by the surface-localized beta-adrenergic receptor. ADCY1, ADRB2, CFTR, GNAS, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, SLC9A3R1, VIL2 11 ADCY1(8), CFTR(5), GNAS(3), PRKACB(2), PRKACG(1), PRKAR1B(4) 2522982 23 17 23 10 2 8 7 2 4 0 0.881 1.000 1.000 573 HSA00272_CYSTEINE_METABOLISM Genes involved in cysteine metabolism CARS, CARS2, CDO1, CTH, GOT1, GOT2, LDHA, LDHAL6A, LDHAL6B, LDHB, LDHC, MPST, SDS, SULT1B1, SULT1C2, SULT1C4, SULT4A1 17 CARS(1), CARS2(1), GOT1(2), GOT2(3), LDHA(3), LDHAL6A(3), LDHC(4), SULT1B1(4), SULT1C2(1), SULT1C4(1), SULT4A1(2) 2443260 25 17 25 14 6 9 8 1 1 0 0.980 1.000 1.000 574 LONGEVITYPATHWAY Caloric restriction in animals often increases lifespan, which may occur via decreased IGF receptor expression and consequent expression of stress-resistance proteins. AKT1, CAT, FOXO3A, GH1, GHR, HRAS, IGF1, IGF1R, PIK3CA, PIK3R1, SHC1, SOD1, SOD2, SOD3 13 CAT(3), GH1(2), GHR(1), HRAS(1), IGF1(3), IGF1R(6), PIK3CA(5), PIK3R1(1), SHC1(2), SOD2(1) 2548653 25 17 24 13 3 11 6 4 1 0 0.963 1.000 1.000 575 RNA_POLYMERASE POLR1B, POLR2A, POLR2B, POLR2C, POLR2D, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR2L, POLRMT 14 POLR1B(8), POLR2A(6), POLR2B(1), POLR2C(2), POLR2D(2), POLR2E(1), POLR2G(2), POLR2H(2), POLR2L(1), POLRMT(1) 2608896 26 17 25 12 6 5 8 3 4 0 0.900 1.000 1.000 576 TNFR2PATHWAY Tumor necrosis factor beta, produced by activated lymphocytes, binds to its receptor TNFR2 to induce activation in immune cells and apoptosis in many other cells. CHUK, DUSP1, IKBKAP, IKBKB, IKBKG, LTA, MAP3K1, MAP3K14, NFKB1, NFKBIA, RELA, RIPK1, TANK, TNFAIP3, TNFRSF1B, TRAF1, TRAF2, TRAF3 17 CHUK(1), IKBKAP(3), IKBKB(2), MAP3K1(3), MAP3K14(1), NFKB1(2), RIPK1(3), TANK(2), TNFRSF1B(1), TRAF3(1) 4338270 19 17 19 12 1 5 7 3 3 0 0.985 1.000 1.000 577 ATP_SYNTHESIS ATP5E, ATP5O, ATP6AP1, ATP6V0A1, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0C, SHMT1, ATP6V0D1, ATP6V0E, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H 21 ATP6V0A1(1), ATP6V0A4(4), ATP6V0B(1), ATP6V0D1(1), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(2), ATP6V1C1(3), ATP6V1C2(2), ATP6V1D(1), ATP6V1G1(1), ATP6V1H(2), SHMT1(2) 2919399 27 16 27 10 9 6 6 4 2 0 0.708 1.000 1.000 578 FLAGELLAR_ASSEMBLY ATP5E, ATP5O, ATP6AP1, ATP6V0A1, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0C, SHMT1, ATP6V0D1, ATP6V0E, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H 21 ATP6V0A1(1), ATP6V0A4(4), ATP6V0B(1), ATP6V0D1(1), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(2), ATP6V1C1(3), ATP6V1C2(2), ATP6V1D(1), ATP6V1G1(1), ATP6V1H(2), SHMT1(2) 2919399 27 16 27 10 9 6 6 4 2 0 0.708 1.000 1.000 579 SA_PROGRAMMED_CELL_DEATH Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. APAF1, BAD, BAK1, BAX, BCL10, BCL2, BCL2L1, BCL2L11, BID, CASP8AP2, CASP9, CES1 12 APAF1(4), BAX(1), BCL10(1), BCL2(1), BCL2L11(2), BID(1), CASP8AP2(7), CASP9(2), CES1(1) 2207577 20 16 20 11 4 6 6 4 0 0 0.970 1.000 1.000 580 TYPE_III_SECRETION_SYSTEM ATP5E, ATP5O, ATP6AP1, ATP6V0A1, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0C, SHMT1, ATP6V0D1, ATP6V0E, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H 21 ATP6V0A1(1), ATP6V0A4(4), ATP6V0B(1), ATP6V0D1(1), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(2), ATP6V1C1(3), ATP6V1C2(2), ATP6V1D(1), ATP6V1G1(1), ATP6V1H(2), SHMT1(2) 2919399 27 16 27 10 9 6 6 4 2 0 0.708 1.000 1.000 581 HSA00602_GLYCOSPHINGOLIPID_BIOSYNTHESIS_NEO_LACTOSERIES Genes involved in glycosphingolipid biosynthesis - neo-lactoseries ABO, B3GNT1, B3GNT2, B3GNT3, B3GNT4, B3GNT5, B4GALT1, B4GALT2, B4GALT3, B4GALT4, FUT1, FUT2, FUT3, FUT4, FUT5, FUT6, FUT7, FUT9, GCNT2, ST3GAL6, ST8SIA1 21 ABO(1), B3GNT1(3), B3GNT2(1), B3GNT3(1), B3GNT5(1), B4GALT1(1), B4GALT2(2), B4GALT3(1), B4GALT4(1), FUT1(2), FUT3(1), FUT7(1), FUT9(1), GCNT2(1), ST3GAL6(1) 3121671 19 15 18 11 6 4 6 2 1 0 0.921 1.000 1.000 582 HSA04710_CIRCADIAN_RHYTHM Genes involved in circadian rhythm ARNTL, BHLHB2, BHLHB3, CLOCK, CRY1, CRY2, CSNK1D, CSNK1E, NPAS2, NR1D1, PER1, PER2, PER3 11 ARNTL(2), CLOCK(2), CRY1(3), CRY2(2), CSNK1D(1), CSNK1E(2), NR1D1(2), PER1(2), PER2(4), PER3(1) 3332973 21 15 21 11 7 8 3 0 3 0 0.947 1.000 1.000 583 HSP27PATHWAY Hsp27 oligomers have molecular chaperone activity and protect heat-stressed cells against apoptosis. ACTA1, APAF1, BCL2, CASP3, CASP9, CYCS, DAXX, FAS, FASLG, HSPB1, HSPB2, IL1A, MAPKAPK2, MAPKAPK3, TNF, TNFRSF6 15 APAF1(4), BCL2(1), CASP3(4), CASP9(2), DAXX(2), FAS(2), FASLG(2), HSPB2(1), IL1A(2), MAPKAPK2(2), MAPKAPK3(1) 2192484 23 15 23 10 5 7 4 5 2 0 0.875 1.000 1.000 584 IGF1MTORPATHWAY Growth factor IGF-1 activates AKT, Gsk3-beta, and mTOR to promote muscle hypertrophy. AKT1, EIF2B5, EIF2S1, EIF2S2, EIF2S3, EIF4E, EIF4EBP1, FRAP1, GSK3B, IGF1, IGF1R, INPPL1, PDK2, PDPK1, PIK3CA, PIK3R1, PPP2CA, PTEN, RPS6, RPS6KB1 19 EIF2B5(3), EIF2S3(1), EIF4E(2), GSK3B(1), IGF1(3), IGF1R(6), INPPL1(3), PIK3CA(5), PIK3R1(1), PTEN(3) 3817884 28 15 26 10 9 11 6 1 1 0 0.697 1.000 1.000 585 AGPCRPATHWAY G-protein coupled receptors (GPCRs) transduce extracellular signals across the plasma membrane; attenuation occurs by signal molecule degradation or receptor-mediated endocytosis. ARRB1, GNAS, GNB1, GNGT1, GPRK2L, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1 11 ARRB1(1), GNAS(3), GNB1(1), GNGT1(1), PRKACB(2), PRKACG(1), PRKAR1B(4), PRKCA(7) 1854375 20 14 20 10 6 8 5 0 1 0 0.953 1.000 1.000 586 AKTPATHWAY Second messenger PIP3 promotes cell survival by activating the anti-apoptotic kinase AKT. AKT1, BAD, CASP9, CHUK, FOXO1A, FOXO3A, GH1, GHR, HSPCA, MLLT7, NFKB1, NFKBIA, PDPK1, PIK3CA, PIK3R1, PPP2CA, RELA, TNFSF6, YWHAH 14 CASP9(2), CHUK(1), GH1(2), GHR(1), NFKB1(2), PIK3CA(5), PIK3R1(1) 2704356 14 14 13 14 1 3 6 2 2 0 0.999 1.000 1.000 587 UBIQUINONE_BIOSYNTHESIS NDUFA1, NDUFA10, NDUFA11, NDUFA4, NDUFA5, NDUFA8, NDUFB2, NDUFB4, NDUFB5, NDUFB6, NDUFB7, NDUFS1, NDUFS2, NDUFV1, NDUFV2 15 NDUFA10(1), NDUFA11(1), NDUFA4(1), NDUFA8(2), NDUFB2(3), NDUFB4(1), NDUFB5(2), NDUFS1(4), NDUFS2(3), NDUFV1(2) 1348695 20 14 20 10 4 5 3 1 7 0 0.922 1.000 1.000 588 CHONDROITIN B3GAT3, B4GALT7, HS3ST1, HS3ST2, HS3ST3A1, HS3ST3B1, XYLT1, XYLT2 8 B3GAT3(1), HS3ST1(1), HS3ST3A1(1), XYLT1(13) 1297740 16 13 16 11 4 3 7 1 1 0 0.931 1.000 1.000 589 HEPARAN_SULFATE_BIOSYNTHESIS B3GAT3, B4GALT7, HS3ST1, HS3ST2, HS3ST3A1, HS3ST3B1, XYLT1, XYLT2 8 B3GAT3(1), HS3ST1(1), HS3ST3A1(1), XYLT1(13) 1297740 16 13 16 11 4 3 7 1 1 0 0.931 1.000 1.000 590 HSA04130_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT Genes involved in SNARE interactions in vesicular transport BET1, BET1L, BNIP1, C1orf142, GOSR1, GOSR2, SEC22B, SNAP23, SNAP25, SNAP29, STX10, STX11, STX12, STX16, STX17, STX18, STX19, STX2, STX3, STX4, STX5, STX6, STX7, STX8, TSNARE1, USE1, VAMP1, VAMP2, VAMP3, VAMP4, VAMP5, VAMP7, VAMP8, VTI1A, VTI1B, YKT6 35 SEC22B(4), SNAP23(1), SNAP25(3), STX12(1), STX16(2), STX19(2), STX2(3), STX3(1), STX7(1), STX8(1), TSNARE1(1), VTI1A(1) 3273375 21 13 21 13 4 7 1 5 4 0 0.991 1.000 1.000 591 RELAPATHWAY Acetylated NF-kB proteins are immune to IkB regulation and promote transcription until the histone deacetylase HDAC3 deacetylates the RelA subunit of NF-kB. CHUK, CREBBP, EP300, FADD, HDAC3, IKBKB, IKBKG, NFKB1, NFKBIA, RELA, RIPK1, TNF, TNFRSF1A, TNFRSF1B, TRADD, TRAF6 15 CHUK(1), CREBBP(2), EP300(1), HDAC3(1), IKBKB(2), NFKB1(2), RIPK1(3), TNFRSF1B(1), TRAF6(3) 4346397 16 13 15 10 4 4 4 1 3 0 0.974 1.000 1.000 592 UBIQUITIN_MEDIATED_PROTEOLYSIS CDC34, HIP2, NRF1, UBE1, UBE2A, UBE2B, UBE2C, UBE2D1, UBE2D2, UBE2D3, UBE2E1, UBE2E3, UBE2G1, UBE2G2, UBE2G2, TAX1BP3, UBE2H, UBE2I, UBE2J1, UBE2J2, UBE2L3, UBE2L6, UBE2M, UBE2N, UBE2S, UBE3A 23 CDC34(1), NRF1(6), UBE2A(2), UBE2D2(1), UBE2D3(3), UBE2H(1), UBE2J1(1), UBE2J2(1), UBE2L6(1), UBE2M(1), UBE2N(1), UBE3A(2) 2037942 21 13 21 12 7 4 1 4 5 0 0.951 1.000 1.000 593 CD40PATHWAY The CD40 receptor is a TNF-type receptor that regulates immunoglobulin expression in B cells and moderates T cell activation via T-cell expression of its ligand. CHUK, DUSP1, IKBKAP, IKBKB, IKBKG, MAP3K1, MAP3K14, NFKB1, NFKBIA, RELA, TNFAIP3, TNFRSF5, TNFSF5, TRAF3, TRAF6 12 CHUK(1), IKBKAP(3), IKBKB(2), MAP3K1(3), MAP3K14(1), NFKB1(2), TRAF3(1), TRAF6(3) 3502092 16 12 15 13 3 3 6 1 3 0 0.997 1.000 1.000 594 HSA00603_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GLOBOSERIES Genes involved in glycosphingolipid biosynthesis - globoseries A4GALT, B3GALNT1, B3GALT5, FUT1, FUT2, FUT9, GBGT1, GLA, HEXA, HEXB, NAGA, ST3GAL1, ST3GAL2, ST8SIA1 14 B3GALNT1(1), FUT1(2), FUT9(1), GLA(2), HEXA(1), NAGA(2), ST3GAL1(2), ST3GAL2(2) 2066322 13 12 13 6 5 1 4 3 0 0 0.797 1.000 1.000 595 HSA00920_SULFUR_METABOLISM Genes involved in sulfur metabolism BPNT1, CHST11, CHST12, CHST13, PAPSS1, PAPSS2, SULT1A1, SULT1A2, SULT1A3, SULT1A4, SULT1E1, SULT2A1, SULT2B1, SUOX 12 BPNT1(1), CHST12(3), CHST13(2), PAPSS1(2), PAPSS2(1), SULT1A2(1), SULT2A1(1), SULT2B1(1), SUOX(4) 1788069 16 12 16 8 1 3 9 3 0 0 0.863 1.000 1.000 596 SA_G2_AND_M_PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. CDC2, CDC25A, CDC25B, CDK7, CDKN1A, CHEK1, NEK1, WEE1 7 CDC25A(2), CDC25B(1), CDK7(2), CHEK1(6), NEK1(3), WEE1(1) 1393329 15 12 15 6 0 7 4 4 0 0 0.872 1.000 1.000 597 GLOBOSIDE_METABOLISM A4GALT, FUT1, FUT2, FUT9, GBGT1, GLA, HEXA, HEXB, NAGA, SIAT4A, SIAT4B, ST3GAL1, ST3GAL2, ST3GAL4, ST8SIA1 13 FUT1(2), FUT9(1), GLA(2), HEXA(1), NAGA(2), ST3GAL1(2), ST3GAL2(2), ST3GAL4(1) 1946739 13 11 13 6 5 1 4 3 0 0 0.777 1.000 1.000 598 GPCRDB_CLASS_A_RHODOPSIN_LIKE2 CYSLTR1, CYSLTR2, GPR109B, GPR161, GPR171, GPR18, GPR34, GPR39, GPR41, GPR42, GPR45, GPR65, GPR68, GPR75, GPR81, LYPDC1 13 CYSLTR2(1), GPR109B(1), GPR18(1), GPR34(1), GPR39(2), GPR45(3), GPR65(2), GPR75(1) 1886238 12 11 12 10 1 1 6 3 1 0 0.986 1.000 1.000 599 HIFPATHWAY Under normal conditions, hypoxia inducible factor HIF-1 is degraded; under hypoxic conditions, it activates transcription of genes controlled by hpoxic response elements (HREs). ARNT, ASPH, COPS5, CREB1, EDN1, EP300, EPO, HIF1A, HSPCA, JUN, LDHA, NOS3, P4HB, VEGF, VHL 13 ARNT(2), ASPH(1), COPS5(1), EP300(1), EPO(1), HIF1A(1), LDHA(3), NOS3(1), P4HB(2), VHL(1) 3323298 14 11 14 11 1 7 1 0 4 1 0.999 1.000 1.000 600 HSA01040_POLYUNSATURATED_FATTY_ACID_BIOSYNTHESIS Genes involved in polyunsaturated fatty acid biosynthesis ACAA1, ACOX1, ACOX3, ELOVL2, ELOVL5, ELOVL6, FADS1, FADS2, FASN, GPSN2, HADHA, HSD17B12, PECR, SCD 13 ACOX1(2), ACOX3(4), ELOVL2(3), ELOVL6(1), FASN(1), HADHA(2), HSD17B12(1), PECR(1) 2790399 15 11 15 10 4 4 4 1 1 1 0.939 1.000 1.000 601 HSA00400_PHENYLALANINE_TYROSINE_AND_TRYPTOPHAN_BIOSYNTHESIS Genes involved in phenylalanine, tyrosine and tryptophan biosynthesis FARS2, FARSA, FARSB, GOT1, GOT2, PAH, TAT, YARS, YARS2 9 FARS2(1), FARSA(1), FARSB(1), GOT1(2), GOT2(3), PAH(1), TAT(2), YARS(1), YARS2(2) 1687449 14 10 14 6 5 6 3 0 0 0 0.757 1.000 1.000 602 SRCRPTPPATHWAY Activation of Src by Protein-tyrosine phosphatase alpha CCNB1, CDC2, CDC25A, CDC25B, CDC25C, CSK, GRB2, PRKCA, PRKCB1, PTPRA, SRC 9 CCNB1(1), CDC25A(2), CDC25B(1), GRB2(3), PRKCA(7), PTPRA(2), SRC(2) 1779297 18 10 18 10 5 9 2 2 0 0 0.951 1.000 1.000 603 TALL1PATHWAY APRIL and BAFF bind to BCMA and TACI receptors on B cell surfaces, promoting immunoglobulin production and cell proliferation. CHUK, MAP3K14, MAPK14, MAPK8, NFKB1, RELA, TNFRSF13B, TNFRSF13C, TNFRSF17, TNFSF13, TNFSF13B, TRAF2, TRAF3, TRAF5, TRAF6 15 CHUK(1), MAP3K14(1), MAPK14(1), MAPK8(3), NFKB1(2), TNFRSF13B(1), TNFSF13B(1), TRAF3(1), TRAF5(1), TRAF6(3) 2818521 15 10 14 13 5 2 5 0 3 0 0.996 1.000 1.000 604 ACE_INHIBITOR_PATHWAY_PHARMGKB ACE, AGT, AGTR1, AGTR2, BDKRB2, KNG1, NOS3, REN 8 ACE(7), AGTR1(1), AGTR2(2), NOS3(1) 1945191 11 9 11 10 1 3 7 0 0 0 0.985 1.000 1.000 605 EPONFKBPATHWAY The cytokine erythropoietin (Epo) prevents stress-induced neuronal apoptosis by stimulating anti-apoptotic pathways through JAK2 kinase and NF-kB. ARNT, CDKN1A, EPO, EPOR, GRIN1, HIF1A, JAK2, NFKB1, NFKBIA, RELA, SOD2 11 ARNT(2), EPO(1), GRIN1(1), HIF1A(1), JAK2(2), NFKB1(2), SOD2(1) 2469447 10 9 10 10 2 2 2 1 3 0 0.998 1.000 1.000 606 ETCPATHWAY Energy is extracted from carbohydrates via oxidation and transferred to the mitochondrial electron transport chain, which couples ATP synthesis to the reduction of oxygen to water. ATP5A1, CYCS, GPD2, MTCO1, NDUFA1, SDHA, SDHB, SDHC, SDHD, UQCRC1 9 ATP5A1(2), GPD2(2), SDHA(5), SDHD(1) 1278519 10 9 10 7 2 1 6 1 0 0 0.964 1.000 1.000 607 SULFUR_METABOLISM BPNT1, PAPSS1, PAPSS2, SULT1A2, SULT1A3, SULT1A3, SULT1A4, SULT1E1, SULT2A1, SUOX 7 BPNT1(1), PAPSS1(2), PAPSS2(1), SULT1A2(1), SULT2A1(1), SUOX(4) 1178544 10 9 10 6 1 2 6 1 0 0 0.927 1.000 1.000 608 PHENYLALANINE_TYROSINE_AND_TRYPTOPHAN_BIOSYNTHESIS ENO1, ENO2, ENO3, FARS2, FARSLB, GOT1, GOT2, PAH, TAT, YARS 9 ENO1(1), ENO3(1), FARS2(1), GOT1(2), GOT2(3), PAH(1), TAT(2), YARS(1) 1602051 12 8 12 8 4 5 2 1 0 0 0.942 1.000 1.000 609 FXRPATHWAY The nuclear receptor transcription factors FXR and LXR are activated by cholesterol metabolites and regulate cholesterol homeostasis. FABP6, LDLR, NR0B2, NR1H3, NR1H4, RXRA 6 LDLR(1), NR1H3(2), NR1H4(3) 1057284 6 5 6 5 1 0 4 1 0 0 0.949 1.000 1.000 610 GANGLIOSIDE_BIOSYNTHESIS B3GALT4, GALGT, SIAT4A, SIAT4B, SIAT7B, SIAT7D, SIAT9, ST3GAL1, ST3GAL2, ST3GAL4, ST3GAL5, ST6GALNAC2, ST6GALNAC4, ST8SIA1 8 ST3GAL1(2), ST3GAL2(2), ST3GAL4(1) 1098306 5 5 5 6 2 0 3 0 0 0 0.978 1.000 1.000 611 IL5PATHWAY Pro-inflammatory IL-5 is secretes by activated T cells, eosinophils, and mast cells, and stimulates the proliferation and activation of eosinophils in bone marrow. CCL11, CCR3, CD4, HLA-DRA, HLA-DRB1, IL1B, IL4, IL5, IL5RA, IL6 10 CCR3(1), CD4(1), HLA-DRA(2), IL5RA(1) 1027743 5 5 5 4 0 1 1 3 0 0 0.975 1.000 1.000 612 HSA00550_PEPTIDOGLYCAN_BIOSYNTHESIS Genes involved in peptidoglycan biosynthesis GLUL, PGLYRP2 2 PGLYRP2(2) 354234 2 2 2 2 0 1 0 1 0 0 0.952 1.000 1.000 613 RABPATHWAY Rab family GTPases regulate vesicle transport, endocytosis and exocytosis, and vesicle docking via interactions with the rabphilins. ACTA1, MEL, RAB11A, RAB1A, RAB2, RAB27A, RAB3A, RAB4A, RAB5A, RAB6A, RAB7, RAB9A 9 RAB4A(1), RAB5A(1) 827793 2 2 2 3 0 1 1 0 0 0 0.989 1.000 1.000 614 HSA00472_D_ARGININE_AND_D_ORNITHINE_METABOLISM Genes involved in D-arginine and D-ornithine metabolism DAO 1 DAO(1) 139836 1 1 1 2 1 0 0 0 0 0 0.989 1.000 1.000 615 HSA00660_C5_BRANCHED_DIBASIC_ACID_METABOLISM Genes involved in C5-branched dibasic acid metabolism ILVBL, SUCLA2 2 404544 0 0 0 2 0 0 0 0 0 0 1.000 1.000 1.000 616 PEPIPATHWAY Proepithelin (PEPI) induces epithelial cells to secrete IL-8, which promotes elastase secretion by neutrophils. ELA1, ELA2, ELA2A, ELA2B, ELA3B, GRN, IL8, SLPI 3 327789 0 0 0 1 0 0 0 0 0 0 1.000 1.000 1.000