Broad GDAC awg_pancan8__2012_08_25 Run Status : UCEC

Tumor	BCR	Clinical	CN	LowP	Methylation	mRNA	mRNAseq	miR	miRseq	RPPA	MAF
UCEC	512	451	444	106	451	54	266	0	377	200	248

Note that the links below require Broad internal Firehose login credentials.

	Pipeline	NotRunnable	Successful	Unsuccessful
1	Aggregate_Clusters	0	1	0
2	Aggregate_Gene_Status	0	1	0
3	CNfocal_Preprocess	0	1	0
4	CopyNumber_Clustering_CNMF	0	1	0
5	CopyNumber_GeneBySample	0	1	0
6	CopyNumber_Gistic2	0	1	0
7	Correlate_Clinical_vs_CopyNumber_Arm	0	1	0
8	Correlate_Clinical_vs_CopyNumber_Focal	0	1	0
9	Correlate_Clinical_vs_miR	1	0	0
10	Correlate_Clinical_vs_Molecular_Signatures	0	1	0
11	Correlate_Clinical_vs_mRNA	0	1	0
12	Correlate_Clinical_vs_Mutation	1	0	0
13	Correlate_CopyNumber_vs_miR	1	0	0
14	Correlate_CopyNumber_vs_mRNA	0	1	0
15	Correlate_CopyNumber_vs_mRNAseq	0	1	0
16	Correlate_Methylation_vs_mRNA	0	1	0
17	GenerateStickFiguresMutSigS2N	0	1	0
18	Methylation_Clustering_CNMF	0	1	0
19	Methylation_Preprocess	0	1	0
20	miR_Clustering_CNMF	1	0	0
21	miR_Clustering_Consensus	1	0	0
22	miR_FindDirectTargets	1	0	0
23	miR_Preprocess	1	0	0
24	miRseq_Clustering_CNMF	0	1	0
25	miRseq_Clustering_Consensus	0	1	0
26	miRseq_Preprocess	0	1	0
27	mRNA_Clustering_CNMF	0	1	0
28	mRNA_Clustering_Consensus	0	1	0
29	mRNA_Preprocess_Median	0	1	0
30	mRNAseq_Clustering_CNMF	0	1	0
31	mRNAseq_Clustering_Consensus	0	1	0
32	mRNAseq_Preprocess	0	1	0
33	Mutation_Assessor	1	0	0
34	Mutation_Significance	0	0	1
35	MutSigNozzleReportS2N	0	1	0
36	MutSig_S2N	0	1	0
37	Pathway_FindEnrichedGenes	1	0	0
38	Pathway_Paradigm_Expression	0	1	0
39	Pathway_Paradigm_Expression_CopyNumber	0	1	0
40	RPPA_Clustering_CNMF	0	1	0
41	RPPA_Clustering_Consensus	0	1	0
	Total	9	31	1

This table generated on Thu Sep 13 11:15:36 2012