Clinical Features Time to Death AGE PRIMARY.SITE.OF.DISEASE GENDER DISTANT.METASTASIS LYMPH.NODE.METASTASIS TUMOR.STAGECODE NEOPLASM.DISEASESTAGE nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Chi-square test_P Chi-square test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q 1p gain 22 (13%) 151 0.13399 1 0.14237 1 0.4145 1 0.49221 1 0.86279 1 0.38199 1 NA NA 0.046215 1 1q gain 59 (34%) 114 0.31783 1 0.77824 1 0.11022 1 1 1 0.63783 1 0.21713 1 NA NA 0.5187 1 2p gain 18 (10%) 155 0.6788 1 0.16989 1 0.58966 1 0.44439 1 0.90736 1 0.15904 1 NA NA 0.81816 1 2q gain 16 (9%) 157 0.86295 1 0.43227 1 0.57804 1 0.59895 1 0.92686 1 0.19376 1 NA NA 0.85713 1 3p gain 18 (10%) 155 0.31114 1 0.67793 1 0.0020852 1 0.31678 1 0.90736 1 0.52939 1 NA NA 0.70484 1 3q gain 23 (13%) 150 0.28467 1 0.44523 1 0.0043342 1 0.36395 1 0.85058 1 0.32973 1 NA NA 0.79317 1 4p gain 17 (10%) 156 0.20633 1 0.049551 1 0.82142 1 0.60102 1 0.92686 1 0.30951 1 NA NA 0.033679 1 4q gain 13 (8%) 160 0.18119 1 0.049077 1 0.77632 1 1 1 0.96641 1 0.45146 1 NA NA 0.082873 1 5p gain 19 (11%) 154 0.66987 1 0.2707 1 0.072987 1 0.8052 1 0.16486 1 0.63258 1 NA NA 0.513 1 5q gain 7 (4%) 166 NA NA 0.11708 1 0.12531 1 0.70756 1 0.98761 1 0.54459 1 NA NA 0.58359 1 6p gain 58 (34%) 115 0.19237 1 0.22897 1 0.052027 1 0.1408 1 0.64759 1 0.58232 1 NA NA 0.46259 1 6q gain 12 (7%) 161 0.95025 1 0.81068 1 0.63251 1 0.54067 1 0.18551 1 0.94132 1 NA NA 0.46966 1 7p gain 73 (42%) 100 0.12232 1 0.83714 1 0.32222 1 0.34453 1 0.040561 1 0.14648 1 NA NA 0.11719 1 7q gain 74 (43%) 99 0.36492 1 0.53379 1 0.43651 1 0.87553 1 0.050577 1 0.17521 1 NA NA 0.017817 1 8p gain 35 (20%) 138 0.51952 1 0.73631 1 0.28669 1 0.34012 1 0.046447 1 0.67693 1 NA NA 0.51499 1 8q gain 54 (31%) 119 0.4244 1 0.54833 1 0.32633 1 0.40024 1 0.15905 1 0.49169 1 NA NA 0.71717 1 9p gain 3 (2%) 170 NA NA 0.033553 1 0.73124 1 0.56034 1 0.99685 1 0.027563 1 NA NA 0.48946 1 9q gain 3 (2%) 170 NA NA 0.87735 1 1 1 0.56034 1 0.99685 1 0.17561 1 NA NA 0.93611 1 11p gain 11 (6%) 162 0.99297 1 0.27003 1 0.74123 1 0.53272 1 0.96641 1 0.10327 1 NA NA 0.8086 1 11q gain 8 (5%) 165 0.92831 1 0.30302 1 0.67355 1 0.487 1 0.98324 1 0.92893 1 NA NA 0.66718 1 12p gain 19 (11%) 154 0.43961 1 0.582 1 0.41131 1 0.62065 1 0.16486 1 0.15231 1 NA NA 0.14201 1 12q gain 7 (4%) 166 0.93454 1 0.91586 1 0.85575 1 0.25051 1 0.98761 1 0.017195 1 NA NA 0.10782 1 13q gain 30 (17%) 143 0.45228 1 0.90355 1 0.01444 1 0.83973 1 0.57719 1 0.1253 1 NA NA 0.10638 1 14q gain 14 (8%) 159 0.5652 1 0.78196 1 1 1 0.57001 1 0.95224 1 0.7192 1 NA NA 0.89387 1 15q gain 26 (15%) 147 0.61356 1 0.36311 1 0.77641 1 1 1 0.825 1 0.48667 1 NA NA 0.93342 1 16p gain 13 (8%) 160 0.20379 1 0.98953 1 0.25555 1 1 1 0.94431 1 0.67925 1 NA NA 0.51737 1 16q gain 12 (7%) 161 0.359 1 0.66317 1 0.45055 1 0.76826 1 0.95224 1 0.29027 1 NA NA 0.72697 1 17p gain 14 (8%) 159 0.87862 1 0.92623 1 0.4046 1 0.40017 1 0.22835 1 0.94013 1 NA NA 0.12988 1 17q gain 22 (13%) 151 0.090488 1 0.051031 1 0.86146 1 0.25226 1 0.49448 1 0.59795 1 NA NA 0.17508 1 18p gain 22 (13%) 151 0.82222 1 0.074488 1 0.74445 1 0.25226 1 0.51554 1 0.42945 1 NA NA 2.5812e-05 0.0136 18q gain 12 (7%) 161 0.95013 1 0.50623 1 0.21336 1 0.54067 1 0.95961 1 0.48972 1 NA NA 1.1633e-07 6.15e-05 19p gain 11 (6%) 162 0.54236 1 0.31311 1 0.086884 1 0.75171 1 0.96641 1 0.96885 1 NA NA 0.086593 1 19q gain 15 (9%) 158 0.48308 1 0.10733 1 0.40036 1 0.097575 1 0.93585 1 0.60893 1 NA NA 0.14584 1 20p gain 53 (31%) 120 0.72701 1 0.51891 1 0.55357 1 0.73514 1 0.15905 1 0.70919 1 NA NA 0.64557 1 20q gain 65 (38%) 108 0.74882 1 0.99069 1 0.5537 1 0.52206 1 0.086022 1 0.94745 1 NA NA 0.61177 1 21q gain 21 (12%) 152 0.019067 1 0.91811 1 0.43326 1 0.47418 1 0.19419 1 0.33531 1 NA NA 0.028947 1 22q gain 46 (27%) 127 0.49041 1 0.94661 1 0.072372 1 0.29151 1 0.6561 1 0.048214 1 NA NA 0.039705 1 Xq gain 3 (2%) 170 NA NA 0.070345 1 0.29145 1 0.28398 1 NA NA NA NA NA NA NA NA 1p loss 13 (8%) 160 0.64817 1 0.7098 1 0.65766 1 1 1 0.96641 1 0.17283 1 NA NA 0.26268 1 1q loss 6 (3%) 167 0.95159 1 0.45521 1 0.12579 1 0.678 1 0.98761 1 0.52319 1 NA NA 0.8866 1 2p loss 15 (9%) 158 0.67648 1 0.80203 1 0.59888 1 1 1 0.95224 1 0.97374 1 NA NA 0.32229 1 2q loss 14 (8%) 159 0.72709 1 0.43188 1 0.79026 1 0.40017 1 0.22835 1 0.90971 1 NA NA 0.1822 1 3p loss 12 (7%) 161 0.29874 1 0.26314 1 0.28501 1 1 1 0.96641 1 0.20608 1 NA NA 0.047428 1 3q loss 12 (7%) 161 0.30152 1 0.36348 1 0.30953 1 0.54067 1 0.96641 1 0.20608 1 NA NA 0.36137 1 4p loss 19 (11%) 154 0.96418 1 0.45935 1 0.28387 1 0.025586 1 0.38316 1 0.88782 1 NA NA 0.76427 1 4q loss 18 (10%) 155 0.81103 1 0.53213 1 0.43344 1 0.070822 1 0.00054308 0.286 0.75458 1 NA NA 0.72805 1 5p loss 23 (13%) 150 0.667 1 0.51274 1 0.25794 1 1 1 0.88596 1 0.94683 1 NA NA 0.97678 1 5q loss 37 (21%) 136 0.79583 1 0.62269 1 0.2516 1 0.7049 1 0.45147 1 0.67823 1 NA NA 0.82444 1 6p loss 17 (10%) 156 0.95839 1 0.99843 1 0.15366 1 1 1 0.90736 1 0.86016 1 NA NA 0.18916 1 6q loss 69 (40%) 104 0.41455 1 0.09164 1 0.096539 1 1 1 0.55278 1 0.77624 1 NA NA 0.53229 1 7p loss 3 (2%) 170 NA NA 0.58303 1 0.29145 1 0.56034 1 0.99685 1 0.97828 1 NA NA 0.38112 1 7q loss 3 (2%) 170 NA NA 0.58303 1 0.29145 1 0.56034 1 0.99685 1 0.97828 1 NA NA 0.38112 1 8p loss 22 (13%) 151 0.2505 1 0.91674 1 0.23018 1 1 1 0.47085 1 0.57911 1 NA NA 0.45196 1 8q loss 3 (2%) 170 NA NA 0.62696 1 0.4747 1 0.056489 1 0.99685 1 0.34882 1 NA NA 0.44788 1 9p loss 100 (58%) 73 0.030342 1 0.44507 1 0.027507 1 0.75284 1 0.55278 1 0.026852 1 NA NA 0.062756 1 9q loss 75 (43%) 98 0.22814 1 0.09335 1 0.099743 1 0.040273 1 0.23528 1 0.35648 1 NA NA 0.026003 1 10p loss 77 (45%) 96 0.10787 1 0.18627 1 0.19495 1 0.060447 1 0.39286 1 0.17959 1 NA NA 0.67613 1 10q loss 84 (49%) 89 0.23232 1 0.004736 1 0.1347 1 0.2115 1 0.18416 1 0.43694 1 NA NA 0.7324 1 11p loss 45 (26%) 128 0.73218 1 0.28632 1 0.43344 1 0.11265 1 0.081707 1 0.26298 1 NA NA 0.040585 1 11q loss 48 (28%) 125 0.90716 1 0.94866 1 0.31193 1 0.16289 1 0.11207 1 0.28219 1 NA NA 0.012629 1 12p loss 10 (6%) 163 0.27341 1 0.78714 1 0.52004 1 0.51251 1 0.14311 1 0.24593 1 NA NA 0.55015 1 12q loss 19 (11%) 154 0.93358 1 0.95632 1 0.23276 1 0.21648 1 0.16486 1 0.48428 1 NA NA 0.7653 1 13q loss 26 (15%) 147 0.69985 1 0.64508 1 0.083719 1 0.67004 1 0.0055551 1 0.097153 1 NA NA 0.48546 1 14q loss 42 (24%) 131 0.89457 1 0.46048 1 0.75425 1 0.71762 1 0.10155 1 0.42605 1 NA NA 0.45994 1 15q loss 11 (6%) 162 0.47491 1 0.29402 1 0.17814 1 0.75171 1 0.14311 1 0.4658 1 NA NA 0.87559 1 16p loss 14 (8%) 159 0.35177 1 0.37453 1 0.53186 1 0.40017 1 0.95961 1 0.8011 1 NA NA 0.24787 1 16q loss 31 (18%) 142 0.12949 1 0.76758 1 0.46306 1 0.68909 1 0.41954 1 0.85348 1 NA NA 0.22054 1 17p loss 38 (22%) 135 0.94192 1 0.53698 1 0.20581 1 0.57522 1 0.55401 1 0.72166 1 NA NA 0.72769 1 17q loss 17 (10%) 156 0.30656 1 0.84907 1 0.72874 1 1 1 0.10987 1 0.17083 1 NA NA 0.6292 1 18p loss 35 (20%) 138 0.89512 1 0.52327 1 0.14636 1 0.56754 1 0.71001 1 0.12904 1 NA NA 0.21805 1 18q loss 33 (19%) 140 0.88223 1 0.44739 1 0.16506 1 0.69262 1 0.61822 1 0.30409 1 NA NA 0.13673 1 19p loss 15 (9%) 158 0.77098 1 0.39319 1 0.59888 1 0.026616 1 0.085298 1 0.614 1 NA NA 0.26289 1 19q loss 16 (9%) 157 0.53914 1 0.70819 1 0.03867 1 0.17769 1 0.044651 1 0.43116 1 NA NA 0.48529 1 20p loss 7 (4%) 166 0.2186 1 0.34206 1 0.2382 1 0.70756 1 0.037933 1 0.87447 1 NA NA 0.65832 1 21q loss 21 (12%) 152 0.86801 1 0.88716 1 0.85675 1 0.81169 1 0.87459 1 0.72574 1 NA NA 0.13742 1 22q loss 13 (8%) 160 0.34432 1 0.66804 1 0.34639 1 0.56833 1 0.2703 1 0.99181 1 NA NA 0.32542 1 Xq loss 6 (3%) 167 0.79722 1 0.63619 1 0.59469 1 0.032938 1 0.99135 1 0.98297 1 NA NA 0.504 1