Clinical Features Time to Death AGE PRIMARY.SITE.OF.DISEASE GENDER RADIATIONS.RADIATION.REGIMENINDICATION DISTANT.METASTASIS LYMPH.NODE.METASTASIS TUMOR.STAGECODE NEOPLASM.DISEASESTAGE nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Chi-square test_P Chi-square test_Q Chi-square test_P Chi-square test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q 1p gain 26 (13%) 176 0.082788 1 0.08986 1 0.67981 1 0.83016 1 0.34003 1 0.8305 1 0.074218 1 NA NA 0.021362 1 1q gain 67 (33%) 135 0.828 1 0.9243 1 0.019081 1 1 1 0.55223 1 0.68321 1 0.034815 1 NA NA 0.14909 1 2p gain 19 (9%) 183 0.18962 1 0.018755 1 0.69212 1 0.32991 1 0.25762 1 0.9068 1 0.2452 1 NA NA 0.65749 1 2q gain 17 (8%) 185 0.49535 1 0.11772 1 0.63131 1 0.29684 1 0.23288 1 0.92519 1 0.31993 1 NA NA 0.64816 1 3p gain 20 (10%) 182 0.92791 1 0.80437 1 0.012791 1 0.23511 1 0.26979 1 0.9068 1 0.78624 1 NA NA 0.61251 1 3q gain 25 (12%) 177 0.49661 1 0.52031 1 0.019627 1 0.2753 1 0.32865 1 0.85402 1 0.5248 1 NA NA 0.69628 1 4p gain 17 (8%) 185 0.31594 1 0.076237 1 0.34162 1 0.43902 1 1 1 0.93373 1 0.28941 1 NA NA 0.52879 1 4q gain 13 (6%) 189 0.38416 1 0.06887 1 0.46608 1 1 1 1 1 0.96943 1 0.40882 1 NA NA 0.64179 1 5p gain 24 (12%) 178 0.040966 1 0.49193 1 0.084199 1 0.37935 1 1 1 0.20399 1 0.78671 1 NA NA 0.51046 1 5q gain 7 (3%) 195 0.22787 1 0.13915 1 0.12494 1 0.71295 1 1 1 0.98868 1 0.5791 1 NA NA 0.43265 1 6p gain 67 (33%) 135 0.50965 1 0.52508 1 0.163 1 0.44136 1 0.55223 1 0.14046 1 0.19268 1 NA NA 0.26268 1 6q gain 16 (8%) 186 0.97003 1 0.76844 1 0.34774 1 1 1 1 1 0.25471 1 0.92706 1 NA NA 0.54014 1 7p gain 85 (42%) 117 0.86422 1 0.89681 1 0.42752 1 0.10534 1 1 1 0.10445 1 0.47091 1 NA NA 0.33555 1 7q gain 86 (43%) 116 0.78672 1 0.51619 1 0.62686 1 0.37878 1 1 1 0.12008 1 0.44358 1 NA NA 0.076566 1 8p gain 39 (19%) 163 0.811 1 0.78434 1 0.12731 1 0.36234 1 0.47646 1 0.037065 1 0.47319 1 NA NA 0.81843 1 8q gain 63 (31%) 139 0.83398 1 0.36969 1 0.33781 1 0.64025 1 0.55354 1 0.13659 1 0.3955 1 NA NA 0.79421 1 9p gain 3 (1%) 199 0.69945 1 0.039226 1 1 1 0.55778 1 1 1 0.99711 1 0.033856 1 NA NA 0.43949 1 9q gain 4 (2%) 198 0.88744 1 0.66192 1 0.51008 1 0.63259 1 1 1 0.9949 1 0.30292 1 NA NA 0.65027 1 11p gain 13 (6%) 189 0.94689 1 0.12316 1 0.79448 1 0.37791 1 0.18175 1 0.95662 1 0.34884 1 NA NA 0.95132 1 11q gain 9 (4%) 193 0.46328 1 0.2123 1 0.90305 1 1 1 1 1 0.98016 1 0.94501 1 NA NA 0.71327 1 12p gain 19 (9%) 183 0.98444 1 0.46421 1 0.15483 1 0.62792 1 1 1 0.091349 1 0.16005 1 NA NA 0.096909 1 12q gain 7 (3%) 195 0.79242 1 0.81603 1 0.82687 1 0.25863 1 1 1 0.98868 1 0.016588 1 NA NA 0.088116 1 13q gain 35 (17%) 167 0.49439 1 0.92528 1 0.043173 1 1 1 1 1 0.55053 1 0.16073 1 NA NA 0.61278 1 14q gain 14 (7%) 188 0.66685 1 0.9102 1 0.54849 1 0.57522 1 1 1 0.95662 1 0.76613 1 NA NA 0.98318 1 15q gain 26 (13%) 176 0.9675 1 0.50605 1 0.12542 1 1 1 1 1 0.84242 1 0.45265 1 NA NA 0.90585 1 16p gain 14 (7%) 188 0.98564 1 0.70327 1 0.36873 1 1 1 1 1 0.94183 1 0.5913 1 NA NA 0.46305 1 16q gain 13 (6%) 189 0.8951 1 0.97911 1 0.64296 1 0.77011 1 1 1 0.94946 1 0.24264 1 NA NA 0.69193 1 17p gain 15 (7%) 187 0.53815 1 0.91536 1 0.23268 1 0.26737 1 1 1 0.18512 1 0.93711 1 NA NA 0.54554 1 17q gain 24 (12%) 178 0.41355 1 0.10211 1 0.12924 1 0.18734 1 1 1 0.44565 1 0.69009 1 NA NA 0.86761 1 18p gain 25 (12%) 177 0.71043 1 0.032203 1 0.66161 1 0.2753 1 0.32865 1 0.46473 1 0.61487 1 NA NA 0.018481 1 18q gain 15 (7%) 187 0.30647 1 0.28201 1 0.16905 1 0.58078 1 1 1 0.94946 1 0.50904 1 NA NA 0.00010405 0.0641 19p gain 12 (6%) 190 0.6365 1 0.22712 1 0.086036 1 0.76667 1 0.16863 1 0.96328 1 0.98933 1 NA NA 0.049697 1 19q gain 15 (7%) 187 0.38443 1 0.15214 1 0.2289 1 0.093992 1 1 1 0.94183 1 0.88343 1 NA NA 0.074066 1 20p gain 57 (28%) 145 0.53752 1 0.48612 1 0.31415 1 0.51907 1 1 1 0.1144 1 0.7884 1 NA NA 0.66841 1 20q gain 70 (35%) 132 0.13734 1 0.86273 1 0.24488 1 0.54248 1 1 1 0.050818 1 0.94335 1 NA NA 0.80855 1 21q gain 22 (11%) 180 0.87879 1 0.91462 1 0.38365 1 0.48659 1 1 1 0.13382 1 0.34358 1 NA NA 0.099567 1 22q gain 50 (25%) 152 0.13461 1 0.89829 1 0.31254 1 0.31461 1 1 1 0.55124 1 0.13972 1 NA NA 0.1004 1 Xq gain 4 (2%) 198 0.7477 1 0.032252 1 0.29577 1 1 1 1 1 0.99711 1 0.98916 1 NA NA 0.38419 1 1p loss 16 (8%) 186 0.11086 1 0.69719 1 0.77918 1 0.60092 1 1 1 0.94946 1 0.42141 1 NA NA 0.62198 1 1q loss 7 (3%) 195 0.92203 1 0.25236 1 0.17909 1 0.42899 1 0.10088 1 0.98868 1 0.72433 1 NA NA 0.85692 1 2p loss 19 (9%) 183 0.10809 1 0.67615 1 0.98181 1 1 1 0.25762 1 0.93373 1 0.71291 1 NA NA 0.37794 1 2q loss 17 (8%) 185 0.17481 1 0.34366 1 0.86994 1 0.79661 1 0.23288 1 0.22029 1 0.92573 1 NA NA 0.30681 1 3p loss 13 (6%) 189 0.40122 1 0.20742 1 0.35174 1 1 1 1 1 0.96328 1 0.22988 1 NA NA 0.042174 1 3q loss 13 (6%) 189 0.40595 1 0.44888 1 0.37482 1 0.5608 1 1 1 0.96328 1 0.22988 1 NA NA 0.36495 1 4p loss 22 (11%) 180 0.85458 1 0.37865 1 0.39971 1 0.10325 1 1 1 0.37613 1 0.86902 1 NA NA 0.65818 1 4q loss 23 (11%) 179 0.86334 1 0.59247 1 0.30252 1 0.16932 1 1 1 0.0016082 0.989 0.80733 1 NA NA 0.19891 1 5p loss 25 (12%) 177 0.9661 1 0.63901 1 1 1 1 1 0.32865 1 0.88679 1 0.91244 1 NA NA 0.87886 1 5q loss 41 (20%) 161 0.63167 1 0.41584 1 0.82394 1 0.47092 1 0.49561 1 0.12026 1 0.4637 1 NA NA 0.48739 1 6p loss 16 (8%) 186 0.55452 1 0.95562 1 0.53194 1 0.60092 1 1 1 0.93373 1 0.85413 1 NA NA 0.51727 1 6q loss 74 (37%) 128 0.6626 1 0.08401 1 0.10985 1 0.7642 1 0.30013 1 0.9815 1 0.89163 1 NA NA 0.53428 1 7p loss 3 (1%) 199 0.093513 1 0.62083 1 0.41824 1 0.55778 1 1 1 0.99711 1 0.96504 1 NA NA 0.58305 1 7q loss 3 (1%) 199 0.093513 1 0.62083 1 0.41824 1 0.55778 1 1 1 0.99711 1 0.96504 1 NA NA 0.58305 1 8p loss 27 (13%) 175 0.75264 1 0.82308 1 0.095327 1 0.40065 1 1 1 0.48191 1 0.64759 1 NA NA 0.5584 1 8q loss 6 (3%) 196 0.80609 1 0.17898 1 0.047689 1 0.67415 1 1 1 0.98868 1 0.32742 1 NA NA 0.55481 1 9p loss 117 (58%) 85 0.57405 1 0.60579 1 0.086906 1 1 1 0.57381 1 0.44066 1 0.063292 1 NA NA 0.028256 1 9q loss 83 (41%) 119 0.44815 1 0.17812 1 0.086839 1 0.055203 1 1 1 0.10132 1 0.49896 1 NA NA 0.0097734 1 10p loss 88 (44%) 114 0.16331 1 0.074822 1 0.4276 1 0.18749 1 1 1 0.68828 1 0.5506 1 NA NA 0.75068 1 10q loss 100 (50%) 102 0.72574 1 0.0019292 1 0.16657 1 0.24547 1 1 1 0.35384 1 0.76701 1 NA NA 0.82976 1 11p loss 51 (25%) 151 0.14123 1 0.34532 1 0.79079 1 0.24233 1 0.57324 1 0.27733 1 0.10781 1 NA NA 0.025351 1 11q loss 55 (27%) 147 0.081604 1 0.89327 1 0.88442 1 0.10284 1 0.56391 1 0.35213 1 0.32307 1 NA NA 0.048968 1 12p loss 13 (6%) 189 0.69173 1 0.96403 1 0.456 1 0.5608 1 0.18175 1 0.4064 1 0.40461 1 NA NA 0.4891 1 12q loss 24 (12%) 178 0.98235 1 0.842 1 0.1409 1 0.18734 1 0.31714 1 0.32229 1 0.6708 1 NA NA 0.78699 1 13q loss 29 (14%) 173 0.94147 1 0.34772 1 0.22942 1 1 1 0.3734 1 0.0074575 1 0.008592 1 NA NA 0.28647 1 14q loss 47 (23%) 155 0.94364 1 0.71831 1 0.87219 1 0.86483 1 1 1 0.30587 1 0.4942 1 NA NA 0.59479 1 15q loss 12 (6%) 190 0.39637 1 0.13775 1 0.15765 1 0.76667 1 1 1 0.084254 1 0.47962 1 NA NA 0.86921 1 16p loss 15 (7%) 187 0.51759 1 0.3256 1 0.64211 1 0.58078 1 1 1 0.95662 1 0.7848 1 NA NA 0.21101 1 16q loss 38 (19%) 164 0.022699 1 0.6334 1 0.40293 1 0.85326 1 1 1 0.43422 1 0.74788 1 NA NA 0.2055 1 17p loss 41 (20%) 161 0.58855 1 0.5009 1 0.67717 1 0.71868 1 1 1 0.60351 1 0.76016 1 NA NA 0.55062 1 17q loss 20 (10%) 182 0.23286 1 0.6468 1 0.80329 1 1 1 1 1 0.22383 1 0.15184 1 NA NA 0.61725 1 18p loss 39 (19%) 163 0.41441 1 0.66146 1 0.55063 1 0.71339 1 0.47646 1 0.69768 1 0.62839 1 NA NA 0.14501 1 18q loss 36 (18%) 166 0.42261 1 0.56635 1 0.56706 1 0.85198 1 0.44683 1 0.56698 1 0.28058 1 NA NA 0.044573 1 19p loss 18 (9%) 184 0.55077 1 0.69686 1 0.7798 1 0.12676 1 1 1 0.15946 1 0.86167 1 NA NA 0.34853 1 19q loss 19 (9%) 183 0.80585 1 0.74225 1 0.21044 1 0.45619 1 1 1 0.12926 1 0.78465 1 NA NA 0.48358 1 20p loss 8 (4%) 194 0.50832 1 0.21261 1 0.11064 1 0.71265 1 1 1 0.033455 1 0.94029 1 NA NA 0.77351 1 21q loss 24 (12%) 178 0.86818 1 0.84309 1 0.90068 1 1 1 1 1 0.85402 1 0.58464 1 NA NA 0.1046 1 22q loss 15 (7%) 187 0.97061 1 0.8235 1 0.46808 1 0.58078 1 1 1 0.25471 1 0.97258 1 NA NA 0.37042 1 Xq loss 5 (2%) 197 0.2929 1 0.93237 1 0.91381 1 0.067557 1 1 1 0.9949 1 0.96954 1 NA NA 0.12598 1