name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-D3-A1Q1-06A-21D-A196-08	94	93	1	78	1.063830e-02	0	coding only	34834024	15	78	4.306135e-07	2.239190e-06
TCGA-D3-A1Q8-06A-11D-A19A-08	290	285	5	190	1.724138e-02	0	coding only	34834024	95	186	2.727219e-06	5.339607e-06
TCGA-D3-A1QB-06A-11D-A19A-08	462	451	11	301	2.380952e-02	0	coding only	34834024	147	297	4.220012e-06	8.526147e-06
TCGA-D3-A2J8-06A-11D-A196-08	795	786	9	508	1.132075e-02	0	coding only	34834024	275	505	7.894580e-06	1.449732e-05
TCGA-D3-A2JL-06A-11D-A196-08	463	456	7	331	1.511879e-02	0	coding only	34834024	121	326	3.473615e-06	9.358666e-06
TCGA-D3-A2JO-06A-11D-A196-08	809	787	22	540	2.719407e-02	0	coding only	34834024	247	534	7.090768e-06	1.532984e-05
TCGA-D3-A3ML-06A-11D-A21A-08	1151	1127	24	753	2.085143e-02	0	coding only	34834024	368	739	1.056438e-05	2.121489e-05
TCGA-D3-A3MV-06A-11D-A21A-08	671	656	15	411	2.235469e-02	0	coding only	34834024	243	404	6.975938e-06	1.159786e-05
TCGA-DA-A1HV-06A-21D-A196-08	1703	1674	29	1110	1.702877e-02	0	coding only	34834024	558	1097	1.601882e-05	3.149220e-05
TCGA-DA-A1I1-06A-12D-A196-08	496	488	8	348	1.612903e-02	0	coding only	34834024	137	345	3.932936e-06	9.904110e-06
TCGA-DA-A3F3-06A-11D-A20D-08	381	370	11	263	2.887139e-02	0	coding only	34834024	104	260	2.985587e-06	7.463967e-06
TCGA-EE-A17X-06A-11D-A197-08	985	960	25	654	2.538071e-02	0	coding only	34834024	299	647	8.583562e-06	1.857379e-05
TCGA-EE-A184-06A-11D-A196-08	405	398	7	291	1.728395e-02	0	coding only	34834024	103	288	2.956879e-06	8.267779e-06
TCGA-EE-A185-06A-11D-A196-08	246	238	8	160	3.252033e-02	1	exome+100bp flanks	34834024	76	157	2.181775e-06	4.507088e-06
TCGA-EE-A20C-06A-11D-A196-08	2518	2480	38	1664	1.509134e-02	0	coding only	34834024	809	1650	2.322442e-05	4.736748e-05
TCGA-EE-A29G-06A-12D-A196-08	498	490	8	328	1.606426e-02	0	coding only	34834024	162	321	4.650625e-06	9.215128e-06
TCGA-EE-A29L-06A-12D-A196-08	2481	2434	47	1595	1.894397e-02	0	coding only	34834024	824	1577	2.365503e-05	4.527183e-05
TCGA-EE-A29Q-06A-11D-A197-08	380	375	5	245	1.315789e-02	0	coding only	34834024	129	241	3.703276e-06	6.918523e-06
TCGA-EE-A29R-06A-11D-A197-08	863	848	15	542	1.738123e-02	0	coding only	34834024	302	530	8.669685e-06	1.521501e-05
TCGA-EE-A29S-06A-11D-A197-08	1323	1298	25	855	1.889645e-02	0	coding only	34834024	436	839	1.251650e-05	2.408565e-05
TCGA-EE-A29V-06A-12D-A197-08	1251	1230	21	809	1.678657e-02	0	coding only	34834024	413	803	1.185622e-05	2.305217e-05
TCGA-EE-A29X-06A-11D-A196-08	196	191	5	124	2.551020e-02	0	coding only	34834024	67	122	1.923407e-06	3.502323e-06
TCGA-EE-A2A1-06A-11D-A197-08	485	479	6	332	1.237113e-02	0	coding only	34834024	147	325	4.220012e-06	9.329959e-06
TCGA-EE-A2A2-06A-11D-A196-08	2104	2065	39	1463	1.853612e-02	0	coding only	34834024	590	1440	1.693746e-05	4.133889e-05
TCGA-EE-A2A5-06A-11D-A197-08	397	389	8	271	2.015113e-02	0	coding only	34834024	116	268	3.330078e-06	7.693627e-06
TCGA-EE-A2GD-06A-11D-A196-08	702	684	18	464	2.564103e-02	0	coding only	34834024	219	458	6.286957e-06	1.314806e-05
TCGA-EE-A2GJ-06A-11D-A196-08	1430	1405	25	895	1.748252e-02	0	coding only	34834024	500	881	1.435378e-05	2.529136e-05
TCGA-EE-A2GL-06A-11D-A196-08	453	444	9	296	1.986755e-02	0	coding only	34834024	146	292	4.191304e-06	8.382609e-06
TCGA-EE-A2GM-06B-11D-A196-08	870	851	19	575	2.183908e-02	0	coding only	34834024	273	568	7.837165e-06	1.630590e-05
TCGA-EE-A2GN-06A-11D-A196-08	518	508	10	365	1.930502e-02	0	coding only	34834024	141	363	4.047767e-06	1.042085e-05
TCGA-EE-A2GP-06A-11D-A197-08	795	783	12	517	1.509434e-02	0	coding only	34834024	259	512	7.435259e-06	1.469827e-05
TCGA-EE-A2GU-06A-11D-A196-08	754	737	17	496	2.254642e-02	0	coding only	34834024	237	482	6.803693e-06	1.383705e-05
TCGA-EE-A2MC-06A-12D-A197-08	959	940	19	625	1.981230e-02	0	coding only	34834024	311	619	8.928053e-06	1.776998e-05
TCGA-EE-A2MD-06A-11D-A197-08	2124	2093	31	1371	1.459510e-02	0	coding only	34834024	713	1350	2.046849e-05	3.875521e-05
TCGA-EE-A2MF-06A-11D-A21A-08	956	936	20	633	2.092050e-02	0	coding only	34834024	301	626	8.640977e-06	1.797094e-05
TCGA-EE-A2ML-06A-11D-A197-08	693	678	15	457	2.164502e-02	0	coding only	34834024	217	446	6.229542e-06	1.280357e-05
TCGA-EE-A2MM-06A-11D-A196-08	712	699	13	459	1.825843e-02	0	coding only	34834024	235	451	6.746278e-06	1.294711e-05
TCGA-EE-A2MN-06A-11D-A197-08	198	190	8	121	4.040404e-02	1	exome+100bp flanks	34834024	66	120	1.894699e-06	3.444908e-06
TCGA-EE-A3AC-06A-11D-A196-08	1261	1239	22	827	1.744647e-02	0	coding only	34834024	404	815	1.159786e-05	2.339667e-05
TCGA-EE-A3J7-06A-11D-A20D-08	1261	1244	17	826	1.348136e-02	0	coding only	34834024	413	809	1.185622e-05	2.322442e-05
TCGA-EE-A3J8-06A-11D-A20D-08	335	327	8	223	2.388060e-02	0	coding only	34834024	103	221	2.956879e-06	6.344372e-06
TCGA-EE-A3JA-06A-11D-A20D-08	1272	1245	27	798	2.122642e-02	0	coding only	34834024	439	782	1.260262e-05	2.244932e-05
TCGA-EE-A3JI-06A-11D-A21A-08	1450	1421	29	1001	2.000000e-02	0	coding only	34834024	411	984	1.179881e-05	2.824824e-05
TCGA-ER-A195-06A-11D-A196-08	327	323	4	212	1.223242e-02	0	coding only	34834024	109	208	3.129125e-06	5.971173e-06
TCGA-ER-A199-06A-11D-A197-08	352	344	8	241	2.272727e-02	0	coding only	34834024	100	237	2.870756e-06	6.803693e-06
TCGA-ER-A19D-06A-11D-A197-08	590	574	16	369	2.711864e-02	0	coding only	34834024	203	360	5.827636e-06	1.033472e-05
TCGA-ER-A19N-06A-11D-A197-08	604	590	14	403	2.317881e-02	0	coding only	34834024	183	396	5.253484e-06	1.136820e-05
TCGA-ER-A2NC-06A-11D-A197-08	485	473	12	316	2.474227e-02	0	coding only	34834024	155	310	4.449673e-06	8.899345e-06
TCGA-ER-A2NE-06A-21D-A196-08	187	181	6	124	3.208556e-02	1	exome+100bp flanks	34834024	54	120	1.550208e-06	3.444908e-06
TCGA-ER-A2NH-06A-11D-A196-08	396	391	5	255	1.262626e-02	0	coding only	34834024	135	254	3.875521e-06	7.291721e-06
TCGA-FS-A1YW-06A-11D-A197-08	206	198	8	137	3.883495e-02	1	exome+100bp flanks	34834024	61	137	1.751161e-06	3.932936e-06
TCGA-FS-A1Z0-06A-11D-A197-08	354	346	8	246	2.259887e-02	0	coding only	34834024	100	245	2.870756e-06	7.033353e-06
TCGA-FS-A1Z3-06A-11D-A197-08	1290	1265	25	859	1.937984e-02	0	coding only	34834024	402	847	1.154044e-05	2.431531e-05
TCGA-FS-A1ZB-06A-12D-A197-08	318	313	5	212	1.572327e-02	0	coding only	34834024	100	209	2.870756e-06	5.999881e-06
TCGA-FS-A1ZE-06A-11D-A197-08	193	187	6	133	3.108808e-02	1	exome+100bp flanks	34834024	53	130	1.521501e-06	3.731983e-06
TCGA-FS-A1ZP-06A-11D-A197-08	574	569	5	382	8.710801e-03	0	coding only	34834024	186	381	5.339607e-06	1.093758e-05
TCGA-FS-A1ZQ-06A-11D-A197-08	642	631	11	412	1.713396e-02	0	coding only	34834024	216	402	6.200834e-06	1.154044e-05
TCGA-FS-A1ZT-06A-11D-A197-08	228	218	10	153	4.385965e-02	1	exome+100bp flanks	34834024	65	150	1.865992e-06	4.306135e-06
TCGA-FS-A1ZW-06A-12D-A197-08	813	796	17	546	2.091021e-02	0	coding only	34834024	247	539	7.090768e-06	1.547338e-05
TCGA-FS-A1ZY-06A-11D-A197-08	44	43	1	29	2.272727e-02	0	coding only	34834024	14	27	4.019059e-07	7.751042e-07
TCGA-GN-A267-06A-21D-A196-08	503	496	7	329	1.391650e-02	0	coding only	34834024	165	326	4.736748e-06	9.358666e-06
TCGA-GN-A268-06A-11D-A196-08	431	422	9	285	2.088167e-02	0	coding only	34834024	135	276	3.875521e-06	7.923288e-06