
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Cnvs_onlysig.48.4103/CNV2ClinicalAnalysis_nozzle_onlysig_focal.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Clinical_Cnvs_onlysig.48.4103/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/400669/all_lesions.conf_99.cnv.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_clinicalDataPicker/SKCM-All_Metastatic/3180573/SKCM-All_Metastatic.clin.merged.picked.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=1", "-cQ=0.25", "-MF=ONLYSIG", "-oT=SKCM-All_Metastatic", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"                     "-oT=SKCM-All_Metastatic"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=180, in cluster file=244, common to both=173
[1]  51 173
[1] "Amp Peak  1(1p12) mutation analysis"
[1] 3
  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                         51                         122 
  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                         51                         122 
[1] "Amp Peak  2(1q21.3) mutation analysis"
[1] 3
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                           90                            83 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                           90                            83 
[1] "Amp Peak  3(1q44) mutation analysis"
[1] 3
  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                         92                          81 
  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                         92                          81 
[1] "Amp Peak  4(3p13) mutation analysis"
[1] 3
  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                         42                         131 
  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                         42                         131 
[1] "Amp Peak  5(4q12) mutation analysis"
[1] 3
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                         32                         141 
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                         32                         141 
[1] "Amp Peak  6(5p15.33) mutation analysis"
[1] 3
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                            48                            125 
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                            48                            125 
[1] "Amp Peak  7(5q35.3) mutation analysis"
[1] 3
  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                           22                           151 
  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                           22                           151 
[1] "Amp Peak  8(6p25.1) mutation analysis"
[1] 3
  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                          101                            72 
  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                          101                            72 
[1] "Amp Peak  9(6q12) mutation analysis"
[1] 3
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                         37                         136 
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                         37                         136 
[1] "Amp Peak 10(7p22.3) mutation analysis"
[1] 3
  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                           96                            77 
  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                           96                            77 
[1] "Amp Peak 11(7q34) mutation analysis"
[1] 3
  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                         99                          74 
  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                         99                          74 
[1] "Amp Peak 12(8q11.21) mutation analysis"
[1] 3
  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                            70                            103 
  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                            70                            103 
[1] "Amp Peak 13(8q24.21) mutation analysis"
[1] 3
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                            82                             91 
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                            82                             91 
[1] "Amp Peak 14(9p24.1) mutation analysis"
[1] 3
  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                           13                           160 
  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                           13                           160 
[1] "Amp Peak 15(11q13.3) mutation analysis"
[1] 3
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                            29                            144 
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                            29                            144 
[1] "Amp Peak 16(11q13.4) mutation analysis"
[1] 3
  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                            28                            145 
  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                            28                            145 
[1] "Amp Peak 17(12q14.1) mutation analysis"
[1] 3
  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                            30                            143 
  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                            30                            143 
[1] "Amp Peak 18(12q15) mutation analysis"
[1] 3
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                          24                          149 
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                          24                          149 
[1] "Amp Peak 19(15q24.3) mutation analysis"
[1] 3
  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                            58                            115 
  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                            58                            115 
[1] "Amp Peak 20(17q25.3) mutation analysis"
[1] 3
  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                            66                            107 
  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                            66                            107 
[1] "Amp Peak 21(19p13.2) mutation analysis"
[1] 3
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                            34                            139 
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                            34                            139 
[1] "Amp Peak 22(20q13.2) mutation analysis"
[1] 3
  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                            90                             83 
  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                            90                             83 
[1] "Amp Peak 23(22q13.2) mutation analysis"
[1] 3
  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                            79                             94 
  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                            79                             94 
[1] "Amp Peak 24(Xq28) mutation analysis"
[1] 3
  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                         30                         143 
  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                         30                         143 
[1] "Del Peak  1(1p36.31) mutation analysis"
[1] 3
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                            46                            127 
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                            46                            127 
[1] "Del Peak  2(1p22.1) mutation analysis"
[1] 3
  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                           46                           127 
  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                           46                           127 
[1] "Del Peak  3(2q37.3) mutation analysis"
[1] 3
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                           44                           129 
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                           44                           129 
[1] "Del Peak  4(3q23) mutation analysis"
[1] 3
  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                         24                         149 
  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                         24                         149 
[1] "Del Peak  5(4q22.1) mutation analysis"
[1] 3
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                           35                           138 
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                           35                           138 
[1] "Del Peak  6(4q34.3) mutation analysis"
[1] 3
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                           44                           129 
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                           44                           129 
[1] "Del Peak  7(5q11.2) mutation analysis"
[1] 3
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                           54                           119 
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                           54                           119 
[1] "Del Peak  8(5q31.3) mutation analysis"
[1] 3
  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                           69                           104 
  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                           69                           104 
[1] "Del Peak  9(6q26) mutation analysis"
[1] 3
  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                        104                          69 
  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                        104                          69 
[1] "Del Peak 10(8p23.3) mutation analysis"
[1] 3
  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                           42                           131 
  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                           42                           131 
[1] "Del Peak 11(9p23) mutation analysis"
[1] 3
  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                        121                          52 
  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                        121                          52 
[1] "Del Peak 12(9p21.3) mutation analysis"
[1] 3
  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                          137                            36 
  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                          137                            36 
[1] "Del Peak 13(10p15.3) mutation analysis"
[1] 3
  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                            92                             81 
  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                            92                             81 
[1] "Del Peak 14(10q23.31) mutation analysis"
[1] 3
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                            107                              66 
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                            107                              66 
[1] "Del Peak 15(10q26.3) mutation analysis"
[1] 3
  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                           107                             66 
  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                           107                             66 
[1] "Del Peak 16(11q23.3) mutation analysis"
[1] 3
  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                           101                             72 
  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                           101                             72 
[1] "Del Peak 17(12p13.31) mutation analysis"
[1] 3
  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                             23                             150 
  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                             23                             150 
[1] "Del Peak 18(12q23.3) mutation analysis"
[1] 3
  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                            38                            135 
  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                            38                            135 
[1] "Del Peak 19(12q24.33) mutation analysis"
[1] 3
  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                             39                             134 
  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                             39                             134 
[1] "Del Peak 20(13q34) mutation analysis"
[1] 3
  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                          42                          131 
  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                          42                          131 
[1] "Del Peak 21(14q32.2) mutation analysis"
[1] 3
  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                            58                            115 
  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                            58                            115 
[1] "Del Peak 22(15q13.3) mutation analysis"
[1] 3
  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                            40                            133 
  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                            40                            133 
[1] "Del Peak 23(15q15.3) mutation analysis"
[1] 3
  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                            39                            134 
  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                            39                            134 
[1] "Del Peak 24(16p13.3) mutation analysis"
[1] 3
  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                            32                            141 
  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                            32                            141 
[1] "Del Peak 25(16q12.1) mutation analysis"
[1] 3
  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                            58                            115 
  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                            58                            115 
[1] "Del Peak 26(16q24.3) mutation analysis"
[1] 3
  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                            62                            111 
  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                            62                            111 
[1] "Del Peak 27(19p13.3) mutation analysis"
[1] 3
  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                            53                            120 
  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                            53                            120 
[1] "data2feature, selection=ALL"
 [1] "YEARSTOBIRTH"                          
 [2] "DAYSTODEATH"                           
 [3] "DAYSTOLASTFOLLOWUP"                    
 [4] "DAYSTOSUBMITTEDSPECIMENDX"             
 [5] "VITALSTATUS"                           
 [6] "DCCUPLOADDATE"                         
 [7] "PRIMARYSITEOFDESEASE"                  
 [8] "GENDER"                                
 [9] "DATEOFINITIALPATHOLOGICDIAGNOSIS"      
[10] "RADIATIONTHERAPY"                      
[11] "RADIATIONS.RADIATION.REGIMENINDICATION"
[12] "DISTANT.METASTASIS"                    
[13] "LYMPH.NODE.METASTASIS"                 
[14] "TUMOR.STAGECODE"                       
[15] "NEOPLASM.DISEASESTAGE"                 
[16] "BATCHNUMBER"                           

Input Data has 16 rows and 173 columns.

[1] "Batch" "16"   
[1] "Last Follow UP"
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 
          NA           NA           NA         3687           NA           NA 
TCGA-D3-A2J6 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK 
          NA           NA           NA           NA         1483           NA 
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV 
          NA         2167           NA           NA           NA          653 
TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 
        4511         1513           82          194          345           98 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 
        1487           NA         3564           NA         5926           NA 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
          NA         3265         1861           NA           NA          713 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
          NA          870           NA         6553          477           NA 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
          NA           NA           NA           NA           NA         3335 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
        2399           NA           NA         1455           NA         1205 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
         979           NA         1349           NA         1716         1136 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
         440         1700        10523           NA           NA           NA 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
        2401          743           NA         1787         1446         1315 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
        9567         4134         5536          686         2717         1664 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
        1673         2296         2766         3101           NA          435 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
        1691          595         2042           NA         3931           NA 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
          NA           NA           NA           NA           NA           NA 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
          NA           NA         4403         6175           NA           NA 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
        7562           NA         3150         4150         1265         1620 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
         129         3733          786          112          813           NA 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
         714           NA           NA           NA           NA           NA 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A19O TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL 
          NA         1340           NA         2433         2443         1010 
TCGA-FR-A3YN TCGA-FR-A3YO TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
        2448           NA         4885           NA           NA           NA 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
          NA           NA           NA           NA           NA           NA 
TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
          NA           NA         1225           NA           NA           NA 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR 
          NA           NA         3080           NA           NA           NA 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
        4525         1617           NA         1505           NA           NA 
TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 
        2366           NA          378         1504            6          699 
TCGA-FW-A3TU TCGA-FW-A3TV TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
        1446           NA           NA         3664           NA         2577 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
          NA           NA           NA           NA         1204 
Variable 1:'AGE':	nDistinctValues=64,	numeric=TRUE,	binary=FALSE,	exclude=FALSE.
Variable 2:'DAYSTODEATH':	nDistinctValues=86,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 3:'DAYSTOLASTFOLLOWUP':	nDistinctValues=83,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 4:'DAYSTOSUBMITTEDSPECIMENDX':	nDistinctValues=86,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 5:'VITALSTATUS':	nDistinctValues=2,	numeric=TRUE,	binary=TRUE,	exclude=FALSE.
Variable 6:'DCCUPLOADDAY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 7:'PRIMARY.SITE.OF.DISEASE':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'GENDER':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'DAYOFINITIALPATHOLOGICDIAGNOSIS':	nDistinctValues=27,	numeric=TRUE,	binary=FALSE,	exclude=TRUE.
Variable 10:'RADIATION.THERAPY':	nDistinctValues=1,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 11:'RADIATIONS.RADIATION.REGIMENINDICATION':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
Variable 12:'DISTANT.METASTASIS':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 13:'LYMPH.NODE.METASTASIS':	nDistinctValues=10,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 14:'TUMOR.STAGECODE':	nDistinctValues=15,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 15:'NEOPLASM.DISEASESTAGE':	nDistinctValues=13,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 16:'BATCH.NUMBER':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=TRUE.
[1] "rownames(nsurv.mat)"
[1] "AGE"                     "PRIMARY.SITE.OF.DISEASE"
[3] "GENDER"                  "DISTANT.METASTASIS"     
[5] "LYMPH.NODE.METASTASIS"   "TUMOR.STAGECODE"        
[7] "NEOPLASM.DISEASESTAGE"  
[1] "TUMOR.?STAGE" "6"           
[1] "stage2"
vv
 T0  T1 T1A T1B  T2 T2A T2B  T3 T3A T3B  T4 T4A T4B TIS  TX 
  6   4  14   3  18  16   6   4  22  13   5   7  27   1  12 
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 173 columns, 1 survival variables, and 7 non-survival variables.
AGE, nv=64, binary=FALSE, numeric=TRUE
PRIMARY.SITE.OF.DISEASE, nv=4, binary=FALSE, numeric=FALSE
GENDER, nv=2, binary=FALSE, numeric=FALSE
DISTANT.METASTASIS, nv=5, binary=FALSE, numeric=FALSE
LYMPH.NODE.METASTASIS, nv=10, binary=FALSE, numeric=FALSE
TUMOR.STAGECODE, nv=0, binary=FALSE, numeric=TRUE
NEOPLASM.DISEASESTAGE, nv=13, binary=FALSE, numeric=FALSE

Clustering(1) Variable = Amp Peak  1(1p12) mutation analysis
D1V1, survival
                             sevent
clus2                          0  1
  AMP PEAK  1(1P12) MUTATED   21 30
  AMP PEAK  1(1P12) WILD-TYPE 62 57
  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                         51                         119 
  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                         30                          57 
$`AMP PEAK  1(1P12) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A2J6 TCGA-D3-A2JD TCGA-D3-A3MO TCGA-D9-A3Z1 TCGA-D9-A3Z3 
       16.57        43.40        11.87         9.30        11.34         3.22 
TCGA-DA-A3F3 TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A29C 
       10.49        33.73        26.86         4.93       109.64        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29V TCGA-EE-A29X 
       13.97        39.62         2.56        44.35        25.87        17.92 
TCGA-EE-A2GB TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GL TCGA-EE-A2GP TCGA-EE-A2GR 
       47.54        22.55        89.33        55.00        13.87        14.30 
TCGA-EE-A2MD TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MM TCGA-EE-A2MQ TCGA-EE-A2MR 
       47.28       204.62        96.23       167.87        43.23       103.56 
TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19L 
       53.26       122.73         3.68        23.47        12.59       131.08 
TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YX TCGA-FS-A1ZH 
       80.32        33.21        80.48       160.60        48.59        32.71 
TCGA-FS-A1ZK TCGA-FS-A1ZQ TCGA-FS-A1ZU TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-GN-A264 
       23.93       133.55        26.56        50.14         0.20       117.93 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A 
       10.09        64.41        32.48 

$`AMP PEAK  1(1P12) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J8 
      112.54        71.80       121.22        28.08        31.59        65.49 
TCGA-D3-A2J9 TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CE 
       23.77        48.76        12.10        58.03        71.24        60.23 
TCGA-D3-A3CF TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX 
       24.53        21.47       148.31        49.74         2.70         6.38 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 
       48.89        36.03       117.17        20.38       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       35.93       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
       68.09        28.60       215.44        15.68        29.82         8.65 
TCGA-EE-A182 TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29H TCGA-EE-A29N 
       14.70        78.87       168.26        63.32        32.19        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A2A0 
       56.42        37.35        14.47        55.89       345.96        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GD 
       78.94        24.43        39.25        58.75        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GK TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
      135.91       182.01        54.71        75.48        90.94       101.95 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 
       55.59        19.56        67.13        21.67       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MK 
       19.76        61.51       103.27       103.17        16.96       144.76 
TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AA 
      203.01        47.54       248.61       136.44        41.59         4.24 
TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J 
       25.84        26.73        13.81       138.77        26.37         6.41 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 
       61.05        44.05        79.99       216.92       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC 
       20.91        28.08         7.76        27.68        48.85       357.37 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZM 
       53.52        40.27        15.45         9.70        47.38       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A1ZY 
       74.73        11.41       148.77        53.16        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU 
       27.02        77.79        12.43        49.45        22.98        47.54 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26D 
       76.41       120.46        84.72        62.76        39.58 

  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                        0.2                         2.7 
  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                     204.62                      357.37 
  AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE 
                      33.73                       49.74 
[1] "0.2 - 204.6 (33.7)" "2.7 - 357.4 (49.7)"
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK  1(1P12) MUTATED"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  1(1P12) WILD-TYPE" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  1(1P12) WILD-TYPE"   "AMP PEAK  1(1P12) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK  1(1P12) MUTATED" "AMP PEAK  1(1P12) WILD-TYPE" 
[1] "hr=" "1.8"
D1V2, continuous
                             vv
clus                          DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK  1(1P12) MUTATED                    6             1
  AMP PEAK  1(1P12) WILD-TYPE                 19             0
                             vv
clus                          REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK  1(1P12) MUTATED                                                                                         12
  AMP PEAK  1(1P12) WILD-TYPE                                                                                       23
                             vv
clus                          REGIONAL LYMPH NODE
  AMP PEAK  1(1P12) MUTATED                    32
  AMP PEAK  1(1P12) WILD-TYPE                  80
D1V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK  1(1P12) MUTATED
  DISTANT METASTASIS                                                                                               6
  PRIMARY TUMOR                                                                                                    1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                        12
  REGIONAL LYMPH NODE                                                                                             32
                                                                                          clus
vv                                                                                         AMP PEAK  1(1P12) WILD-TYPE
  DISTANT METASTASIS                                                                                                19
  PRIMARY TUMOR                                                                                                      0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          23
  REGIONAL LYMPH NODE                                                                                               80
D1V4, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  1(1P12) MUTATED     18   33
  AMP PEAK  1(1P12) WILD-TYPE   49   73
        clus
vv       AMP PEAK  1(1P12) MUTATED AMP PEAK  1(1P12) WILD-TYPE
  FEMALE                        18                          49
  MALE                          33                          73
                             vv
clus                           M0  M1 M1A M1B M1C
  AMP PEAK  1(1P12) MUTATED    42   1   1   0   1
  AMP PEAK  1(1P12) WILD-TYPE 108   1   1   2   1
D1V5, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  1(1P12) MUTATED   27  0   5   5  0   1   1   2  4  0
  AMP PEAK  1(1P12) WILD-TYPE 68  2   2  11  1   3  10   3 12  2
D1V6, multiclass
D1V7, continuous
                             vv
clus                          I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK  1(1P12) MUTATED             1       4        3        5        7
  AMP PEAK  1(1P12) WILD-TYPE           3      13        7        9       12
                             vv
clus                          STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK  1(1P12) MUTATED           1         2         2         1
  AMP PEAK  1(1P12) WILD-TYPE         7         8         6         8
                             vv
clus                          STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  1(1P12) MUTATED            5          4          7        3
  AMP PEAK  1(1P12) WILD-TYPE          1         14         16        3
D1V8, multiclass

Clustering(2) Variable = Amp Peak  2(1q21.3) mutation analysis
D2V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  2(1Q21.3) MUTATED   46 44
  AMP PEAK  2(1Q21.3) WILD-TYPE 37 43
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                           90                            80 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                           44                            43 
$`AMP PEAK  2(1Q21.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD 
       16.57       121.22        28.08        65.49        23.77        11.87 
TCGA-D3-A3CE TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 
       60.23         9.30        21.47         2.70         6.38        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
        3.22        20.38       194.83        35.93       107.34        61.18 
TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17Z TCGA-EE-A181 
       65.92        68.09        10.49       215.44         8.65        33.73 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29D 
       14.70        26.86         4.93       109.64       168.26        13.97 
TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       39.62         2.56        44.35        14.47        55.89       345.96 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE 
       78.94        24.43        58.75        47.54       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        22.55        89.33        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M7 TCGA-EE-A2MJ TCGA-EE-A2MN 
      101.95        55.59        67.13        28.80        96.23        47.54 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB 
       43.23       103.56       136.44        41.59        53.26       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A3PL 
       25.84         3.68        23.47        12.59        26.37        33.21 
TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.48       160.60       216.92        48.59       202.62        20.91 
TCGA-FS-A1ZA TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZK 
       27.68       357.37        53.52        15.45        32.71        23.93 
TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ 
       74.73       133.55        53.16        26.56        27.06        27.02 
TCGA-FS-A4F0 TCGA-FW-A3I3 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
       77.79         0.20        10.09        64.41        32.48        39.58 

$`AMP PEAK  2(1Q21.3) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2JF TCGA-D3-A2JK 
      112.54        71.80        31.59        43.40        48.76        12.10 
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CF TCGA-D9-A148 TCGA-D9-A149 TCGA-DA-A1HV 
       58.03        71.24        24.53       148.31        49.74        48.89 
TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I2 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A3F2 
       36.03       117.17       176.55        53.92        23.44        28.60 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H 
       15.68        29.82        78.87        63.32        47.84        32.19 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       18.58        56.42        37.35        25.87        17.92        46.82 
TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GK TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GT 
       39.25        43.23        54.71        13.87        14.30        19.56 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
       21.67       129.24        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
      103.17        16.96       204.62       144.76       203.01       167.87 
TCGA-EE-A2MP TCGA-EE-A3AA TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19J 
      248.61         4.24        26.73        13.81       138.77         6.41 
TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YY 
      131.08        61.05        44.05        79.99        80.32       228.59 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZJ 
       28.08         7.76        48.85        40.27         9.70        47.38 
TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZW TCGA-FS-A4F2 TCGA-FS-A4F9 
      101.26        11.41       148.77        49.48        50.14        12.43 
TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       49.45        22.98        47.54        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A268 
       84.72        62.76 

  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                         0.20                          4.24 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                       357.37                        248.61 
  AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE 
                       43.790                        48.805 
[1] "0.2 - 357.4 (43.8)" "4.2 - 248.6 (48.8)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  2(1Q21.3) WILD-TYPE" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  2(1Q21.3) WILD-TYPE"   "AMP PEAK  2(1Q21.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK  2(1Q21.3) MUTATED" "AMP PEAK  2(1Q21.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK  2(1Q21.3) MUTATED"   "AMP PEAK  2(1Q21.3) MUTATED" 
[1] "hr=" "1.1"
D2V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK  2(1Q21.3) MUTATED                   16             1
  AMP PEAK  2(1Q21.3) WILD-TYPE                  9             0
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK  2(1Q21.3) MUTATED                                                                                         20
  AMP PEAK  2(1Q21.3) WILD-TYPE                                                                                       15
                               vv
clus                            REGIONAL LYMPH NODE
  AMP PEAK  2(1Q21.3) MUTATED                    53
  AMP PEAK  2(1Q21.3) WILD-TYPE                  59
D2V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK  2(1Q21.3) MUTATED
  DISTANT METASTASIS                                                                                                16
  PRIMARY TUMOR                                                                                                      1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          20
  REGIONAL LYMPH NODE                                                                                               53
                                                                                          clus
vv                                                                                         AMP PEAK  2(1Q21.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   9
  PRIMARY TUMOR                                                                                                        0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            15
  REGIONAL LYMPH NODE                                                                                                 59
D2V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  2(1Q21.3) MUTATED     35   55
  AMP PEAK  2(1Q21.3) WILD-TYPE   32   51
        clus
vv       AMP PEAK  2(1Q21.3) MUTATED AMP PEAK  2(1Q21.3) WILD-TYPE
  FEMALE                          35                            32
  MALE                            55                            51
                               vv
clus                            M0 M1 M1A M1B M1C
  AMP PEAK  2(1Q21.3) MUTATED   77  1   2   1   2
  AMP PEAK  2(1Q21.3) WILD-TYPE 73  1   0   1   0
D2V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  2(1Q21.3) MUTATED   50  0   3  10  0   3   3   4  9  2
  AMP PEAK  2(1Q21.3) WILD-TYPE 45  2   4   6  1   1   8   1  7  0
D2V6, multiclass
D2V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK  2(1Q21.3) MUTATED             2       7        6        9        9
  AMP PEAK  2(1Q21.3) WILD-TYPE           2      10        4        5       10
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK  2(1Q21.3) MUTATED           4         5         4         3
  AMP PEAK  2(1Q21.3) WILD-TYPE         4         5         4         6
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  2(1Q21.3) MUTATED            4         10         12        5
  AMP PEAK  2(1Q21.3) WILD-TYPE          2          8         11        1
D2V8, multiclass

Clustering(3) Variable = Amp Peak  3(1q44) mutation analysis
D3V1, survival
                             sevent
clus2                          0  1
  AMP PEAK  3(1Q44) MUTATED   50 42
  AMP PEAK  3(1Q44) WILD-TYPE 33 45
  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                         92                          78 
  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                         42                          45 
$`AMP PEAK  3(1Q44) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD 
       16.57       121.22        28.08        65.49        23.77        11.87 
TCGA-D3-A3CE TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 
       60.23         9.30        21.47         2.70         6.38        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I5 
        3.22       117.17        20.38       194.83        35.93       107.34 
TCGA-DA-A1I7 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17Z 
       61.18        65.92        68.09        10.49       215.44         8.65 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29D 
       33.73        14.70         4.93       109.64       168.26        13.97 
TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29T 
       39.62         2.56        44.35        56.42        14.47       345.96 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE 
       78.94        24.43        58.75        47.54       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
      182.01        22.55        89.33        75.48        90.94       101.95 
TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M7 TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MN 
       55.59        67.13        28.80        96.23       203.01        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
      122.73        25.84         3.68        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YX 
       26.37        80.32        33.21        80.48       160.60        48.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1ZC TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZJ 
      202.62        20.91       357.37        15.45        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY 
       23.93        74.73       133.55        53.16        26.56        27.06 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-GN-A266 TCGA-GN-A267 
       27.02        77.79        49.45         0.20        10.09        64.41 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

$`AMP PEAK  3(1Q44) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2JF TCGA-D3-A2JK 
      112.54        71.80        31.59        43.40        48.76        12.10 
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CF TCGA-D9-A148 TCGA-D9-A149 TCGA-DA-A1HV 
       58.03        71.24        24.53       148.31        49.74        48.89 
TCGA-DA-A1HW TCGA-DA-A1I2 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F8 
       36.03       176.55        53.92        23.44        28.60        15.68 
TCGA-EE-A17X TCGA-EE-A183 TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29H 
       29.82        26.86        78.87        63.32        47.84        32.19 
TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       18.58        37.35        55.89        25.87        17.92        46.82 
TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GP TCGA-EE-A2GR 
       39.25        43.23        54.71        55.00        13.87        14.30 
TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       19.56        21.67       129.24        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MM 
      103.27       103.17        16.96       204.62       144.76       167.87 
TCGA-EE-A3AA TCGA-EE-A3AE TCGA-EE-A3AF TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M 
        4.24        26.73        13.81         6.41       131.08        61.05 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       44.05        79.99       216.92       228.59        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZM 
       27.68        48.85        53.52        40.27         9.70       101.26 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZW TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FW-A3R5 
       11.41       148.77        49.48        50.14        12.43        22.98 
TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A268 
       47.54        76.41       120.46       117.93        84.72        62.76 

  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                       0.20                        4.24 
  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                     357.37                      228.59 
  AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE 
                      47.54                       47.69 
[1] "0.2 - 357.4 (47.5)" "4.2 - 228.6 (47.7)"
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  3(1Q44) WILD-TYPE" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  3(1Q44) WILD-TYPE"   "AMP PEAK  3(1Q44) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  3(1Q44) MUTATED" "AMP PEAK  3(1Q44) WILD-TYPE" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK  3(1Q44) MUTATED"   "AMP PEAK  3(1Q44) MUTATED" 
[1] "hr=" "1.4"
D3V2, continuous
                             vv
clus                          DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK  3(1Q44) MUTATED                   15             1
  AMP PEAK  3(1Q44) WILD-TYPE                 10             0
                             vv
clus                          REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK  3(1Q44) MUTATED                                                                                         22
  AMP PEAK  3(1Q44) WILD-TYPE                                                                                       13
                             vv
clus                          REGIONAL LYMPH NODE
  AMP PEAK  3(1Q44) MUTATED                    54
  AMP PEAK  3(1Q44) WILD-TYPE                  58
D3V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK  3(1Q44) MUTATED
  DISTANT METASTASIS                                                                                              15
  PRIMARY TUMOR                                                                                                    1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                        22
  REGIONAL LYMPH NODE                                                                                             54
                                                                                          clus
vv                                                                                         AMP PEAK  3(1Q44) WILD-TYPE
  DISTANT METASTASIS                                                                                                10
  PRIMARY TUMOR                                                                                                      0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          13
  REGIONAL LYMPH NODE                                                                                               58
D3V4, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  3(1Q44) MUTATED     38   54
  AMP PEAK  3(1Q44) WILD-TYPE   29   52
        clus
vv       AMP PEAK  3(1Q44) MUTATED AMP PEAK  3(1Q44) WILD-TYPE
  FEMALE                        38                          29
  MALE                          54                          52
                             vv
clus                          M0 M1 M1A M1B M1C
  AMP PEAK  3(1Q44) MUTATED   79  1   2   1   2
  AMP PEAK  3(1Q44) WILD-TYPE 71  1   0   1   0
D3V5, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  3(1Q44) MUTATED   51  0   4  10  0   3   3   3 10  2
  AMP PEAK  3(1Q44) WILD-TYPE 44  2   3   6  1   1   8   2  6  0
D3V6, multiclass
D3V7, continuous
                             vv
clus                          I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK  3(1Q44) MUTATED             2       8        6        8       11
  AMP PEAK  3(1Q44) WILD-TYPE           2       9        4        6        8
                             vv
clus                          STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK  3(1Q44) MUTATED           2         5         5         3
  AMP PEAK  3(1Q44) WILD-TYPE         6         5         3         6
                             vv
clus                          STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  3(1Q44) MUTATED            5          9         13        5
  AMP PEAK  3(1Q44) WILD-TYPE          1          9         10        1
D3V8, multiclass

Clustering(4) Variable = Amp Peak  4(3p13) mutation analysis
D4V1, survival
                             sevent
clus2                          0  1
  AMP PEAK  4(3P13) MUTATED   23 18
  AMP PEAK  4(3P13) WILD-TYPE 60 69
  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                         41                         129 
  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                         18                          69 
$`AMP PEAK  4(3P13) MUTATED`
TCGA-D3-A1Q9 TCGA-D3-A2J8 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A3CC TCGA-D3-A3CE 
       31.59        65.49        11.87        48.76        71.24        60.23 
TCGA-D3-A3MV TCGA-DA-A1HW TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1IA TCGA-DA-A3F5 
       21.47        36.03        35.93       107.34        65.92       215.44 
TCGA-DA-A3F8 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       15.68       109.64        78.87        32.19         2.56        44.35 
TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GN TCGA-EE-A2GP 
       14.47       345.96       182.01        22.55        90.94        13.87 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2MP TCGA-EE-A2MU TCGA-EE-A3AE TCGA-ER-A19M 
       21.67       129.24       248.61        53.26        26.73        61.05 
TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A44A TCGA-FS-A1Z0 TCGA-FS-A1ZA TCGA-FS-A1ZK 
       80.32        33.21       160.60       202.62        27.68        23.93 
TCGA-FS-A4F2 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A268 
       50.14       117.93        84.72        10.09        62.76 

$`AMP PEAK  4(3P13) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J6 
       16.57       112.54        71.80       121.22        28.08        43.40 
TCGA-D3-A2J9 TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D9-A148 
       23.77        12.10        58.03        24.53         9.30       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV 
       49.74         2.70         6.38        11.34         3.22        48.89 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I7 TCGA-DA-A1I8 
      117.17        20.38       194.83       176.55        61.18        53.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A17Z 
       23.44        68.09        28.60        10.49        29.82         8.65 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20H TCGA-EE-A29A 
       33.73        14.70        26.86         4.93       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       47.84        13.97        39.62        18.58        56.42        37.35 
TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
       55.89        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE 
       39.25        58.75        47.54        43.23       314.53       135.91 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GR 
       89.33        54.71        55.00        75.48       101.95        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       55.59        19.56        67.13        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR 
      144.76       203.01       167.87        47.54        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
      136.44        41.59         4.24       122.73        25.84         3.68 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YX 
      131.08        44.05        79.99        80.48       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZC 
      228.59        20.91        28.08         7.76        48.85       357.37 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
      101.26        74.73       133.55        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 
       26.56        49.48        27.06        27.02        77.79        12.43 
TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 
       49.45         0.20        22.98        47.54        76.41       120.46 
TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        32.48        39.58 

  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                       2.56                        0.20 
  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                     345.96                      357.37 
  AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE 
                      53.26                       47.38 
[1] "2.6 - 346.0 (53.3)" "0.2 - 357.4 (47.4)"
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK  4(3P13) MUTATED" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
  "AMP PEAK  4(3P13) MUTATED"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK  4(3P13) WILD-TYPE"   "AMP PEAK  4(3P13) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  4(3P13) WILD-TYPE" "AMP PEAK  4(3P13) WILD-TYPE" 
[1] "hr=" "1.4"
D4V2, continuous
                             vv
clus                          DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK  4(3P13) MUTATED                    8             1
  AMP PEAK  4(3P13) WILD-TYPE                 17             0
                             vv
clus                          REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK  4(3P13) MUTATED                                                                                         10
  AMP PEAK  4(3P13) WILD-TYPE                                                                                       25
                             vv
clus                          REGIONAL LYMPH NODE
  AMP PEAK  4(3P13) MUTATED                    23
  AMP PEAK  4(3P13) WILD-TYPE                  89
D4V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK  4(3P13) MUTATED
  DISTANT METASTASIS                                                                                               8
  PRIMARY TUMOR                                                                                                    1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                        10
  REGIONAL LYMPH NODE                                                                                             23
                                                                                          clus
vv                                                                                         AMP PEAK  4(3P13) WILD-TYPE
  DISTANT METASTASIS                                                                                                17
  PRIMARY TUMOR                                                                                                      0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          25
  REGIONAL LYMPH NODE                                                                                               89
D4V4, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  4(3P13) MUTATED     20   22
  AMP PEAK  4(3P13) WILD-TYPE   47   84
        clus
vv       AMP PEAK  4(3P13) MUTATED AMP PEAK  4(3P13) WILD-TYPE
  FEMALE                        20                          47
  MALE                          22                          84
                             vv
clus                           M0  M1 M1A M1B M1C
  AMP PEAK  4(3P13) MUTATED    37   0   1   0   1
  AMP PEAK  4(3P13) WILD-TYPE 113   2   1   2   1
D4V5, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  4(3P13) MUTATED   24  0   2   5  0   2   2   1  2  1
  AMP PEAK  4(3P13) WILD-TYPE 71  2   5  11  1   2   9   4 14  1
D4V6, multiclass
D4V7, continuous
                             vv
clus                          I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK  4(3P13) MUTATED             1       4        6        3        4
  AMP PEAK  4(3P13) WILD-TYPE           3      13        4       11       15
                             vv
clus                          STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK  4(3P13) MUTATED           1         1         2         1
  AMP PEAK  4(3P13) WILD-TYPE         7         9         6         8
                             vv
clus                          STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  4(3P13) MUTATED            1          8          4        2
  AMP PEAK  4(3P13) WILD-TYPE          5         10         19        4
D4V8, multiclass

Clustering(5) Variable = Amp Peak  5(4q12) mutation analysis
D5V1, survival
                             sevent
clus2                          0  1
  AMP PEAK  5(4Q12) MUTATED   18 14
  AMP PEAK  5(4Q12) WILD-TYPE 65 73
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                         32                         138 
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                         14                          73 
$`AMP PEAK  5(4Q12) MUTATED`
TCGA-D3-A1Q8 TCGA-D3-A3C6 TCGA-D3-A3CE TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW 
       28.08        58.03        60.23         3.22        48.89        36.03 
TCGA-DA-A1I1 TCGA-DA-A1IB TCGA-DA-A3F5 TCGA-EE-A181 TCGA-EE-A20F TCGA-EE-A29D 
      194.83        23.44       215.44        33.73        78.87        13.97 
TCGA-EE-A29P TCGA-EE-A2GB TCGA-EE-A2GI TCGA-EE-A2GP TCGA-EE-A2MJ TCGA-EE-A2MP 
       56.42        47.54        22.55        13.87        96.23       248.61 
TCGA-EE-A2MR TCGA-EE-A3AA TCGA-EE-A3AD TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN 
      103.56         4.24         3.68        80.32        33.21        80.48 
TCGA-FS-A1YX TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZU TCGA-GN-A264 
       48.59        47.38        23.93       101.26        26.56       117.93 
TCGA-GN-A268 TCGA-GN-A26D 
       62.76        39.58 

$`AMP PEAK  5(4Q12) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q9 TCGA-D3-A2J6 
       16.57       112.54        71.80       121.22        31.59        43.40 
TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3CC 
       65.49        23.77        11.87        48.76        12.10        71.24 
TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW 
       24.53         9.30        21.47       148.31        49.74         2.70 
TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 
        6.38        11.34       117.17        20.38       176.55        35.93 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F2 
      107.34        61.18        53.92        65.92        68.09        28.60 
TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 
       10.49        15.68        29.82         8.65        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E 
        4.93       109.64       168.26        63.32        47.84        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29R 
       32.19         2.56        44.35        18.58        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       55.89       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE 
       24.43        39.25        58.75        43.23       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
      182.01        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
      101.95        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
      103.17        16.96       204.62       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB 
       47.54        43.23       136.44        41.59        53.26       122.73 
TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
       25.84        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 
       26.37         6.41       131.08        61.05        44.05        79.99 
TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      160.60       216.92       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE 
        7.76        27.68        48.85       357.37        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR 
       15.45         9.70        32.71        74.73       133.55        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 
      148.77        53.16        49.48        27.06        27.02        77.79 
TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU 
       50.14        12.43        49.45         0.20        22.98        47.54 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A 
       76.41       120.46        84.72        10.09        64.41        32.48 

  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                       3.22                        0.20 
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                     248.61                      357.37 
  AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE 
                     48.065                      47.540 
[1] "3.2 - 248.6 (48.1)" "0.2 - 357.4 (47.5)"
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
  "AMP PEAK  5(4Q12) MUTATED"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK  5(4Q12) MUTATED" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  5(4Q12) WILD-TYPE" "AMP PEAK  5(4Q12) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  5(4Q12) WILD-TYPE"   "AMP PEAK  5(4Q12) MUTATED" 
[1] "hr=" "1.2"
D5V2, continuous
                             vv
clus                          DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK  5(4Q12) MUTATED                    2             0
  AMP PEAK  5(4Q12) WILD-TYPE                 23             1
                             vv
clus                          REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK  5(4Q12) MUTATED                                                                                          6
  AMP PEAK  5(4Q12) WILD-TYPE                                                                                       29
                             vv
clus                          REGIONAL LYMPH NODE
  AMP PEAK  5(4Q12) MUTATED                    24
  AMP PEAK  5(4Q12) WILD-TYPE                  88
D5V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK  5(4Q12) MUTATED
  DISTANT METASTASIS                                                                                               2
  PRIMARY TUMOR                                                                                                    0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                         6
  REGIONAL LYMPH NODE                                                                                             24
                                                                                          clus
vv                                                                                         AMP PEAK  5(4Q12) WILD-TYPE
  DISTANT METASTASIS                                                                                                23
  PRIMARY TUMOR                                                                                                      1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          29
  REGIONAL LYMPH NODE                                                                                               88
D5V4, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  5(4Q12) MUTATED     14   18
  AMP PEAK  5(4Q12) WILD-TYPE   53   88
        clus
vv       AMP PEAK  5(4Q12) MUTATED AMP PEAK  5(4Q12) WILD-TYPE
  FEMALE                        14                          53
  MALE                          18                          88
                             vv
clus                           M0  M1 M1A M1B M1C
  AMP PEAK  5(4Q12) MUTATED    26   0   1   1   0
  AMP PEAK  5(4Q12) WILD-TYPE 124   2   1   1   2
D5V5, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  5(4Q12) MUTATED   16  0   3   4  0   0   2   1  3  0
  AMP PEAK  5(4Q12) WILD-TYPE 79  2   4  12  1   4   9   4 13  2
D5V6, multiclass
D5V7, continuous
                             vv
clus                          I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK  5(4Q12) MUTATED             0       4        1        2        4
  AMP PEAK  5(4Q12) WILD-TYPE           4      13        9       12       15
                             vv
clus                          STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK  5(4Q12) MUTATED           0         1         3         2
  AMP PEAK  5(4Q12) WILD-TYPE         8         9         5         7
                             vv
clus                          STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  5(4Q12) MUTATED            2          4          4        2
  AMP PEAK  5(4Q12) WILD-TYPE          4         14         19        4
D5V8, multiclass

Clustering(6) Variable = Amp Peak  6(5p15.33) mutation analysis
D6V1, survival
                                sevent
clus2                             0  1
  AMP PEAK  6(5P15.33) MUTATED   28 19
  AMP PEAK  6(5P15.33) WILD-TYPE 55 68
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                            47                            123 
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                            19                             68 
$`AMP PEAK  6(5P15.33) MUTATED`
TCGA-D3-A1Q9 TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CF 
       31.59        48.76        12.10        58.03        71.24        24.53 
TCGA-D9-A148 TCGA-D9-A1JW TCGA-DA-A1HV TCGA-DA-A1I2 TCGA-DA-A1I5 TCGA-DA-A3F3 
      148.31         2.70        48.89       176.55       107.34        10.49 
TCGA-DA-A3F5 TCGA-EE-A181 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A29E 
      215.44        33.73       109.64       168.26        13.97        39.62 
TCGA-EE-A29M TCGA-EE-A29T TCGA-EE-A2A0 TCGA-EE-A2GM TCGA-EE-A2M6 TCGA-EE-A2M7 
       44.35       345.96        46.82        75.48       129.24        28.80 
TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE 
      248.61       136.44         4.24       122.73         3.68        26.73 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3PL TCGA-FR-A44A 
       23.47       138.77        61.05        44.05        33.21       160.60 
TCGA-FS-A1YX TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZK TCGA-FS-A1ZQ TCGA-FS-A1ZY 
       48.59        40.27         9.70        23.93       133.55        27.06 
TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A26D 
        0.20        47.54       117.93        84.72        39.58 

$`AMP PEAK  6(5P15.33) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J6 
       16.57       112.54        71.80       121.22        28.08        43.40 
TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A3CE TCGA-D3-A3MO TCGA-D3-A3MV 
       65.49        23.77        11.87        60.23         9.30        21.47 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1HY 
       49.74         6.38        11.34         3.22        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
       20.38       194.83        35.93        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
       23.44        68.09        28.60        15.68        29.82         8.65 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C 
       14.70        26.86         4.93        78.87        63.32        47.84 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
       32.19         2.56        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       55.89        25.87        17.92        78.94        24.43        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO 
       22.55        89.33        54.71        55.00        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       13.87        14.30        55.59        19.56        67.13        21.67 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       19.76        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AC TCGA-EE-A3AF 
       43.23       103.56        41.59        53.26        25.84        13.81 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A1A1 TCGA-ER-A3ET 
       12.59        26.37         6.41       131.08        79.99        80.32 
TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
       80.48       216.92       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZF 
        7.76        27.68        48.85       357.37        53.52        15.45 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
       32.71        47.38       101.26        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 
       53.16        26.56        49.48        27.02        77.79        50.14 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A266 
       12.43        49.45        22.98        76.41       120.46        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
       64.41        62.76        32.48 

  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                          0.20                           2.56 
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                        345.96                         357.37 
  AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE 
                         47.54                          47.54 
[1] "0.2 - 346.0 (47.5)" "2.6 - 357.4 (47.5)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK  6(5P15.33) MUTATED"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK  6(5P15.33) MUTATED" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK  6(5P15.33) WILD-TYPE" "AMP PEAK  6(5P15.33) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK  6(5P15.33) WILD-TYPE"   "AMP PEAK  6(5P15.33) MUTATED" 
[1] "hr=" "1.6"
D6V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK  6(5P15.33) MUTATED                    9             1
  AMP PEAK  6(5P15.33) WILD-TYPE                 16             0
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK  6(5P15.33) MUTATED                                                                                          6
  AMP PEAK  6(5P15.33) WILD-TYPE                                                                                       29
                                vv
clus                             REGIONAL LYMPH NODE
  AMP PEAK  6(5P15.33) MUTATED                    32
  AMP PEAK  6(5P15.33) WILD-TYPE                  80
D6V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK  6(5P15.33) MUTATED
  DISTANT METASTASIS                                                                                                  9
  PRIMARY TUMOR                                                                                                       1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            6
  REGIONAL LYMPH NODE                                                                                                32
                                                                                          clus
vv                                                                                         AMP PEAK  6(5P15.33) WILD-TYPE
  DISTANT METASTASIS                                                                                                   16
  PRIMARY TUMOR                                                                                                         0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             29
  REGIONAL LYMPH NODE                                                                                                  80
D6V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK  6(5P15.33) MUTATED     19   29
  AMP PEAK  6(5P15.33) WILD-TYPE   48   77
        clus
vv       AMP PEAK  6(5P15.33) MUTATED AMP PEAK  6(5P15.33) WILD-TYPE
  FEMALE                           19                             48
  MALE                             29                             77
                                vv
clus                              M0  M1 M1A M1B M1C
  AMP PEAK  6(5P15.33) MUTATED    35   1   1   1   1
  AMP PEAK  6(5P15.33) WILD-TYPE 115   1   1   1   1
D6V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  6(5P15.33) MUTATED   26  0   0   3  0   2   5   0  3  1
  AMP PEAK  6(5P15.33) WILD-TYPE 69  2   7  13  1   2   6   5 13  1
D6V6, multiclass
D6V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK  6(5P15.33) MUTATED             1       4        2        3        7
  AMP PEAK  6(5P15.33) WILD-TYPE           3      13        8       11       12
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK  6(5P15.33) MUTATED           1         1         4         0
  AMP PEAK  6(5P15.33) WILD-TYPE         7         9         4         9
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  6(5P15.33) MUTATED            0          5          6        3
  AMP PEAK  6(5P15.33) WILD-TYPE          6         13         17        3
D6V8, multiclass

Clustering(7) Variable = Amp Peak  7(5q35.3) mutation analysis
D7V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  7(5Q35.3) MUTATED   13  9
  AMP PEAK  7(5Q35.3) WILD-TYPE 70 78
  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                           22                           148 
  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                            9                            78 
$`AMP PEAK  7(5Q35.3) MUTATED`
TCGA-D3-A2JF TCGA-D3-A3CF TCGA-D9-A148 TCGA-D9-A1JW TCGA-DA-A1IA TCGA-EE-A182 
       48.76        24.53       148.31         2.70        65.92        14.70 
TCGA-EE-A20H TCGA-EE-A29H TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A2GJ TCGA-EE-A2MS 
      168.26        32.19        14.47       345.96        89.33       136.44 
TCGA-EE-A2MT TCGA-ER-A19F TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FS-A1YX TCGA-FS-A1ZD 
       41.59        26.37        80.32        33.21        48.59        53.52 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FW-A3I3 TCGA-FW-A3TU 
       47.38        23.93         0.20        47.54 

$`AMP PEAK  7(5Q35.3) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 
       16.57       112.54        71.80       121.22        28.08        31.59 
TCGA-D3-A2J6 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 
       43.40        65.49        23.77        11.87        12.10        58.03 
TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 TCGA-D9-A1JX 
       71.24        60.23         9.30        21.47        49.74         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       11.34         3.22        48.89        36.03       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82         8.65        33.73        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29L 
       78.87        63.32        47.84        13.97        39.62         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29V 
       44.35        18.58        56.42        37.35        55.89        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       14.30        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MU TCGA-EE-A3AA 
       47.54       248.61        43.23       103.56        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
      138.77        12.59         6.41       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 
       79.99        80.48       160.60       216.92       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC 
       20.91        28.08         7.76        27.68        48.85       357.37 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZM TCGA-FS-A1ZP 
       40.27        15.45         9.70        32.71       101.26        74.73 
TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
      133.55        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       27.06        27.02        77.79        50.14        12.43        49.45 
TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 
       22.98        76.41       120.46       117.93        84.72        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                         0.20                          2.56 
  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                       345.96                        357.37 
  AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE 
                        47.46                         47.69 
[1] "0.2 - 346.0 (47.5)" "2.6 - 357.4 (47.7)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "AMP PEAK  7(5Q35.3) MUTATED"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "AMP PEAK  7(5Q35.3) MUTATED"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"AMP PEAK  7(5Q35.3) WILD-TYPE"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "AMP PEAK  7(5Q35.3) MUTATED"   "AMP PEAK  7(5Q35.3) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "AMP PEAK  7(5Q35.3) MUTATED" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"AMP PEAK  7(5Q35.3) WILD-TYPE" "AMP PEAK  7(5Q35.3) WILD-TYPE" 
[1] "hr=" "1.3"
D7V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK  7(5Q35.3) MUTATED                    7             0
  AMP PEAK  7(5Q35.3) WILD-TYPE                 18             1
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK  7(5Q35.3) MUTATED                                                                                          3
  AMP PEAK  7(5Q35.3) WILD-TYPE                                                                                       32
                               vv
clus                            REGIONAL LYMPH NODE
  AMP PEAK  7(5Q35.3) MUTATED                    12
  AMP PEAK  7(5Q35.3) WILD-TYPE                 100
D7V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK  7(5Q35.3) MUTATED
  DISTANT METASTASIS                                                                                                 7
  PRIMARY TUMOR                                                                                                      0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           3
  REGIONAL LYMPH NODE                                                                                               12
                                                                                          clus
vv                                                                                         AMP PEAK  7(5Q35.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                  18
  PRIMARY TUMOR                                                                                                        1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            32
  REGIONAL LYMPH NODE                                                                                                100
D7V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  7(5Q35.3) MUTATED     11   11
  AMP PEAK  7(5Q35.3) WILD-TYPE   56   95
        clus
vv       AMP PEAK  7(5Q35.3) MUTATED AMP PEAK  7(5Q35.3) WILD-TYPE
  FEMALE                          11                            56
  MALE                            11                            95
                               vv
clus                             M0  M1 M1A M1B M1C
  AMP PEAK  7(5Q35.3) MUTATED    18   1   1   1   0
  AMP PEAK  7(5Q35.3) WILD-TYPE 132   1   1   1   2
D7V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  7(5Q35.3) MUTATED   13  0   1   3  0   1   0   0  2  1
  AMP PEAK  7(5Q35.3) WILD-TYPE 82  2   6  13  1   3  11   5 14  1
D7V6, multiclass
D7V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK  7(5Q35.3) MUTATED             0       3        3        1        2
  AMP PEAK  7(5Q35.3) WILD-TYPE           4      14        7       13       17
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK  7(5Q35.3) MUTATED           1         0         0         0
  AMP PEAK  7(5Q35.3) WILD-TYPE         7        10         8         9
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  7(5Q35.3) MUTATED            1          1          3        2
  AMP PEAK  7(5Q35.3) WILD-TYPE          5         17         20        4
D7V8, multiclass

Clustering(8) Variable = Amp Peak  8(6p25.1) mutation analysis
D8V1, survival
                               sevent
clus2                            0  1
  AMP PEAK  8(6P25.1) MUTATED   42 58
  AMP PEAK  8(6P25.1) WILD-TYPE 41 29
  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                          100                            70 
  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                           58                            29 
$`AMP PEAK  8(6P25.1) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q7 TCGA-D3-A1Q9 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JF 
       16.57       121.22        31.59        65.49        23.77        48.76 
TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
       58.03        71.24        60.23        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-DA-A1HV TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 
        2.70        48.89        20.38       194.83       176.55        35.93 
TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 
       65.92        68.09        10.49         8.65        33.73        26.86 
TCGA-EE-A185 TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29L TCGA-EE-A29P 
        4.93       168.26        63.32        13.97         2.56        56.42 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GD 
       14.47        55.89        25.87        39.25        47.54       314.53 
TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR 
      182.01        89.33        55.00        90.94        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2MD 
       55.59        19.56        67.13       129.24        28.80        47.28 
TCGA-EE-A2ME TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MN 
      103.27       204.62        96.23       144.76       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AD 
      248.61        43.23       136.44        53.26         4.24         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       26.73        13.81        23.47        12.59        26.37         6.41 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1YX 
       61.05        44.05        80.32        33.21       216.92        48.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZC TCGA-FS-A1ZE 
      202.62        20.91        28.08        27.68       357.37        40.27 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
        9.70        32.71        47.38        23.93       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ 
       11.41        53.16        26.56        49.48        27.06        27.02 
TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A266 
       50.14        12.43         0.20        47.54       117.93        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

$`AMP PEAK  8(6P25.1) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q8 TCGA-D3-A2J6 TCGA-D3-A2JD TCGA-D3-A2JK 
      112.54        71.80        28.08        43.40        11.87        12.10 
TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HW 
       24.53         9.30         6.38        11.34         3.22        36.03 
TCGA-DA-A1HY TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A3F2 
      117.17       107.34        61.18        53.92        23.44        28.60 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A20B TCGA-EE-A20F 
      215.44        15.68        29.82        14.70       109.64        78.87 
TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q 
       47.84        39.62        32.19        44.35        18.58        37.35 
TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 
      345.96        17.92        46.82        78.94        24.43        58.75 
TCGA-EE-A2GC TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GM TCGA-EE-A2GO 
       43.23       135.91        22.55        54.71        75.48       101.95 
TCGA-EE-A2M5 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2ML 
       21.67        19.76        61.51       103.17        16.96       203.01 
TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AH TCGA-ER-A19L 
      103.56        41.59       122.73        25.84       138.77       131.08 
TCGA-ER-A1A1 TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YY TCGA-FS-A1Z7 TCGA-FS-A1ZB 
       79.99        80.48       160.60       228.59         7.76        48.85 
TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZQ TCGA-FS-A1ZS TCGA-FS-A4F0 TCGA-FS-A4FC 
       53.52        15.45       133.55       148.77        77.79        49.45 
TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 
       22.98        76.41       120.46        84.72 

  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                         0.20                          3.22 
  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                       357.37                        345.96 
  AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE 
                        47.46                         49.15 
[1] "0.2 - 357.4 (47.5)" "3.2 - 346.0 (49.2)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK  8(6P25.1) WILD-TYPE" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "AMP PEAK  8(6P25.1) MUTATED" "AMP PEAK  8(6P25.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK  8(6P25.1) WILD-TYPE"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK  8(6P25.1) MUTATED"   "AMP PEAK  8(6P25.1) MUTATED" 
[1] "hr=" "1.5"
D8V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK  8(6P25.1) MUTATED                   18             0
  AMP PEAK  8(6P25.1) WILD-TYPE                  7             1
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK  8(6P25.1) MUTATED                                                                                         22
  AMP PEAK  8(6P25.1) WILD-TYPE                                                                                       13
                               vv
clus                            REGIONAL LYMPH NODE
  AMP PEAK  8(6P25.1) MUTATED                    61
  AMP PEAK  8(6P25.1) WILD-TYPE                  51
D8V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK  8(6P25.1) MUTATED
  DISTANT METASTASIS                                                                                                18
  PRIMARY TUMOR                                                                                                      0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          22
  REGIONAL LYMPH NODE                                                                                               61
                                                                                          clus
vv                                                                                         AMP PEAK  8(6P25.1) WILD-TYPE
  DISTANT METASTASIS                                                                                                   7
  PRIMARY TUMOR                                                                                                        1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            13
  REGIONAL LYMPH NODE                                                                                                 51
D8V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK  8(6P25.1) MUTATED     40   61
  AMP PEAK  8(6P25.1) WILD-TYPE   27   45
        clus
vv       AMP PEAK  8(6P25.1) MUTATED AMP PEAK  8(6P25.1) WILD-TYPE
  FEMALE                          40                            27
  MALE                            61                            45
                               vv
clus                            M0 M1 M1A M1B M1C
  AMP PEAK  8(6P25.1) MUTATED   85  2   2   1   1
  AMP PEAK  8(6P25.1) WILD-TYPE 65  0   0   1   1
D8V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  8(6P25.1) MUTATED   55  0   7   8  0   4   5   4  9  0
  AMP PEAK  8(6P25.1) WILD-TYPE 40  2   0   8  1   0   6   1  7  2
D8V6, multiclass
D8V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK  8(6P25.1) MUTATED             1      11        6        8       10
  AMP PEAK  8(6P25.1) WILD-TYPE           3       6        4        6        9
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK  8(6P25.1) MUTATED           4         6         6         3
  AMP PEAK  8(6P25.1) WILD-TYPE         4         4         2         6
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  8(6P25.1) MUTATED            6         11         12        4
  AMP PEAK  8(6P25.1) WILD-TYPE          0          7         11        2
D8V8, multiclass

Clustering(9) Variable = Amp Peak  9(6q12) mutation analysis
D9V1, survival
                             sevent
clus2                          0  1
  AMP PEAK  9(6Q12) MUTATED   21 16
  AMP PEAK  9(6Q12) WILD-TYPE 62 71
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                         37                         133 
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                         16                          71 
$`AMP PEAK  9(6Q12) MUTATED`
TCGA-D3-A1Q7 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JF TCGA-D3-A3CC TCGA-D9-A149 
      121.22        65.49        23.77        48.76        71.24        49.74 
TCGA-D9-A1JW TCGA-DA-A1HV TCGA-DA-A1I1 TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A20B 
        2.70        48.89       194.83        33.73        26.86       109.64 
TCGA-EE-A2GB TCGA-EE-A2GH TCGA-EE-A2GN TCGA-EE-A2GT TCGA-EE-A2M7 TCGA-EE-A2ME 
       47.54       182.01        90.94        19.56        28.80       103.27 
TCGA-EE-A2MI TCGA-EE-A2MN TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AE 
      204.62        47.54        41.59        53.26         4.24        26.73 
TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3ET TCGA-FS-A1Z0 
       23.47        12.59        61.05        44.05        80.32       202.62 
TCGA-FS-A1ZA TCGA-FS-A1ZW TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 
       27.68        49.48        47.54       117.93        10.09        64.41 
TCGA-GN-A268 
       62.76 

$`AMP PEAK  9(6Q12) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J6 
       16.57       112.54        71.80        28.08        31.59        43.40 
TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D3-A3MO 
       11.87        12.10        58.03        60.23        24.53         9.30 
TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HW 
       21.47       148.31         6.38        11.34         3.22        36.03 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
      117.17        20.38       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A185 
      215.44        15.68        29.82         8.65        14.70         4.93 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
       78.87       168.26        63.32        47.84        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q 
       32.19         2.56        44.35        18.58        56.42        37.35 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       14.47        55.89       345.96        25.87        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GD 
       78.94        24.43        39.25        58.75        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      135.91        22.55        89.33        54.71        55.00        75.48 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 
      101.95        13.87        14.30        55.59        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2MG TCGA-EE-A2MH 
      129.24        19.76        61.51        47.28       103.17        16.96 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MP TCGA-EE-A2MQ 
       96.23       144.76       203.01       167.87       248.61        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF 
      103.56       136.44       122.73        25.84         3.68        13.81 
TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A1A1 TCGA-ER-A3PL 
      138.77        26.37         6.41       131.08        79.99        33.21 
TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z3 
       80.48       160.60       216.92        48.59       228.59        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        48.85       357.37        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
       74.73       133.55        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       27.06        27.02        77.79        50.14        12.43        49.45 
TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A26A 
        0.20        22.98        76.41       120.46        84.72        32.48 
TCGA-GN-A26D 
       39.58 

  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                        2.7                         0.2 
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                     204.62                      357.37 
  AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE 
                      48.89                       46.82 
[1] "2.7 - 204.6 (48.9)" "0.2 - 357.4 (46.8)"
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "AMP PEAK  9(6Q12) MUTATED" "AMP PEAK  9(6Q12) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK  9(6Q12) WILD-TYPE"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK  9(6Q12) MUTATED"   "AMP PEAK  9(6Q12) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK  9(6Q12) WILD-TYPE" "AMP PEAK  9(6Q12) WILD-TYPE" 
[1] "hr=" "1.3"
D9V2, continuous
                             vv
clus                          DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK  9(6Q12) MUTATED                    4             0
  AMP PEAK  9(6Q12) WILD-TYPE                 21             1
                             vv
clus                          REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK  9(6Q12) MUTATED                                                                                         10
  AMP PEAK  9(6Q12) WILD-TYPE                                                                                       25
                             vv
clus                          REGIONAL LYMPH NODE
  AMP PEAK  9(6Q12) MUTATED                    23
  AMP PEAK  9(6Q12) WILD-TYPE                  89
D9V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK  9(6Q12) MUTATED
  DISTANT METASTASIS                                                                                               4
  PRIMARY TUMOR                                                                                                    0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                        10
  REGIONAL LYMPH NODE                                                                                             23
                                                                                          clus
vv                                                                                         AMP PEAK  9(6Q12) WILD-TYPE
  DISTANT METASTASIS                                                                                                21
  PRIMARY TUMOR                                                                                                      1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          25
  REGIONAL LYMPH NODE                                                                                               89
D9V4, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK  9(6Q12) MUTATED     13   24
  AMP PEAK  9(6Q12) WILD-TYPE   54   82
        clus
vv       AMP PEAK  9(6Q12) MUTATED AMP PEAK  9(6Q12) WILD-TYPE
  FEMALE                        13                          54
  MALE                          24                          82
                             vv
clus                           M0  M1 M1A M1B M1C
  AMP PEAK  9(6Q12) MUTATED    31   0   0   0   0
  AMP PEAK  9(6Q12) WILD-TYPE 119   2   2   2   2
D9V5, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK  9(6Q12) MUTATED   21  0   4   1  0   1   1   1  2  0
  AMP PEAK  9(6Q12) WILD-TYPE 74  2   3  15  1   3  10   4 14  2
D9V6, multiclass
D9V7, continuous
                             vv
clus                          I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK  9(6Q12) MUTATED             0       4        4        5        3
  AMP PEAK  9(6Q12) WILD-TYPE           4      13        6        9       16
                             vv
clus                          STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK  9(6Q12) MUTATED           2         2         1         0
  AMP PEAK  9(6Q12) WILD-TYPE         6         8         7         9
                             vv
clus                          STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK  9(6Q12) MUTATED            3          3          2        0
  AMP PEAK  9(6Q12) WILD-TYPE          3         15         21        6
D9V8, multiclass

Clustering(10) Variable = Amp Peak 10(7p22.3) mutation analysis
D10V1, survival
                               sevent
clus2                            0  1
  AMP PEAK 10(7P22.3) MUTATED   43 51
  AMP PEAK 10(7P22.3) WILD-TYPE 40 36
  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                           94                            76 
  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                           51                            36 
$`AMP PEAK 10(7P22.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q9 TCGA-D3-A2J9 TCGA-D3-A2JD 
       16.57       112.54        71.80        31.59        23.77        11.87 
TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z3 
       71.24         9.30       148.31        49.74         6.38         3.22 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 
       48.89        36.03       117.17        20.38       176.55        35.93 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-EE-A17Z 
      107.34        61.18        53.92        65.92        68.09         8.65 
TCGA-EE-A181 TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
       33.73       168.26        63.32        47.84        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29T 
       32.19         2.56        18.58        56.42        37.35       345.96 
TCGA-EE-A2A0 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       46.82        58.75        47.54       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       89.33        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM 
       21.67       129.24        28.80        96.23       144.76       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MU 
       47.54       248.61        43.23       103.56       136.44        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
        4.24       122.73         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19J TCGA-ER-A19M TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A 
      138.77         6.41        61.05        33.21        80.48       160.60 
TCGA-FS-A1YW TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZC TCGA-FS-A1ZD 
      216.92        20.91        28.08         7.76       357.37        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-FS-A1ZR 
       40.27        32.71        23.93       101.26       133.55        11.41 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-GN-A264 TCGA-GN-A266 
       27.06        27.02        50.14         0.20       117.93        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

$`AMP PEAK 10(7P22.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J6 TCGA-D3-A2J8 TCGA-D3-A2JF TCGA-D3-A2JK 
      121.22        28.08        43.40        65.49        48.76        12.10 
TCGA-D3-A3C6 TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D3-A3MV TCGA-D9-A1JW TCGA-D9-A3Z1 
       58.03        60.23        24.53        21.47         2.70        11.34 
TCGA-DA-A1I1 TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
      194.83        23.44        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
       29.82        14.70        26.86         4.93       109.64        78.87 
TCGA-EE-A29M TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A1 
       44.35        14.47        55.89        25.87        17.92        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GK TCGA-EE-A2GR 
       24.43        39.25        43.23       314.53        54.71        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       55.59        19.56        67.13        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2ML TCGA-EE-A2MT 
      103.27       103.17        16.96       204.62       203.01        41.59 
TCGA-EE-A3AC TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       25.84        12.59        26.37       131.08        44.05        79.99 
TCGA-ER-A3ET TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1ZA TCGA-FS-A1ZB 
       80.32        48.59       228.59       202.62        27.68        48.85 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZP TCGA-FS-A1ZS TCGA-FS-A1ZT 
       15.45         9.70        47.38        74.73       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 
       26.56        49.48        77.79        12.43        49.45        22.98 
TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 
       47.54        76.41       120.46        84.72 

  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                          0.2                           2.7 
  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                       357.37                        314.53 
  AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE 
                       48.365                        47.330 
[1] "0.2 - 357.4 (48.4)" "2.7 - 314.5 (47.3)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK 10(7P22.3) MUTATED" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK 10(7P22.3) WILD-TYPE" "AMP PEAK 10(7P22.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK 10(7P22.3) WILD-TYPE"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "AMP PEAK 10(7P22.3) MUTATED"   "AMP PEAK 10(7P22.3) MUTATED" 
[1] "hr=" "1.1"
D10V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 10(7P22.3) MUTATED                   14             0
  AMP PEAK 10(7P22.3) WILD-TYPE                 11             1
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 10(7P22.3) MUTATED                                                                                         21
  AMP PEAK 10(7P22.3) WILD-TYPE                                                                                       14
                               vv
clus                            REGIONAL LYMPH NODE
  AMP PEAK 10(7P22.3) MUTATED                    61
  AMP PEAK 10(7P22.3) WILD-TYPE                  51
D10V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 10(7P22.3) MUTATED
  DISTANT METASTASIS                                                                                                14
  PRIMARY TUMOR                                                                                                      0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          21
  REGIONAL LYMPH NODE                                                                                               61
                                                                                          clus
vv                                                                                         AMP PEAK 10(7P22.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                  11
  PRIMARY TUMOR                                                                                                        1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            14
  REGIONAL LYMPH NODE                                                                                                 51
D10V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 10(7P22.3) MUTATED     34   62
  AMP PEAK 10(7P22.3) WILD-TYPE   33   44
        clus
vv       AMP PEAK 10(7P22.3) MUTATED AMP PEAK 10(7P22.3) WILD-TYPE
  FEMALE                          34                            33
  MALE                            62                            44
                               vv
clus                            M0 M1 M1A M1B M1C
  AMP PEAK 10(7P22.3) MUTATED   80  2   2   1   2
  AMP PEAK 10(7P22.3) WILD-TYPE 70  0   0   1   0
D10V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 10(7P22.3) MUTATED   53  0   5  10  0   2   4   4  8  2
  AMP PEAK 10(7P22.3) WILD-TYPE 42  2   2   6  1   2   7   1  8  0
D10V6, multiclass
D10V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 10(7P22.3) MUTATED             4      10        6        4       10
  AMP PEAK 10(7P22.3) WILD-TYPE           0       7        4       10        9
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 10(7P22.3) MUTATED           4         5         6         3
  AMP PEAK 10(7P22.3) WILD-TYPE         4         5         2         6
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 10(7P22.3) MUTATED            5         11         10        5
  AMP PEAK 10(7P22.3) WILD-TYPE          1          7         13        1
D10V8, multiclass

Clustering(11) Variable = Amp Peak 11(7q34) mutation analysis
D11V1, survival
                             sevent
clus2                          0  1
  AMP PEAK 11(7Q34) MUTATED   47 50
  AMP PEAK 11(7Q34) WILD-TYPE 36 37
  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                         97                          73 
  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                         50                          37 
$`AMP PEAK 11(7Q34) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q9 TCGA-D3-A2J9 TCGA-D3-A2JD 
       16.57       112.54        71.80        31.59        23.77        11.87 
TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
       71.24        60.23         9.30        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
        2.70         6.38         3.22        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A181 TCGA-EE-A182 
       65.92        68.09       215.44        15.68        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E 
       26.86       109.64       168.26        63.32        47.84        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29T 
       32.19         2.56        44.35        18.58        56.42       345.96 
TCGA-EE-A2A0 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       46.82        58.75        47.54       135.91       182.01        22.55 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GT TCGA-EE-A2M6 
       55.00        75.48       101.95        13.87        19.56       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MQ 
       28.80        19.76        16.96        96.23       144.76        43.23 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AE 
      103.56       136.44        53.26         4.24       122.73        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19J TCGA-ER-A19M TCGA-ER-A3ET 
       13.81        23.47       138.77         6.41        61.05        80.32 
TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z7 
       33.21        80.48       160.60        48.59       202.62         7.76 
TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZM 
      357.37        53.52        15.45         9.70        32.71       101.26 
TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZZ TCGA-FS-A4F2 TCGA-FW-A3I3 
      133.55        11.41       148.77        27.02        50.14         0.20 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

$`AMP PEAK 11(7Q34) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J6 TCGA-D3-A2J8 TCGA-D3-A2JF TCGA-D3-A2JK 
      121.22        28.08        43.40        65.49        48.76        12.10 
TCGA-D3-A3C6 TCGA-D3-A3CF TCGA-D9-A3Z1 TCGA-DA-A1I1 TCGA-DA-A1IB TCGA-DA-A3F2 
       58.03        24.53        11.34       194.83        23.44        28.60 
TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A29D 
       10.49        29.82         8.65         4.93        78.87        13.97 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A1 
       37.35        14.47        55.89        25.87        17.92        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GJ TCGA-EE-A2GK 
       24.43        39.25        43.23       314.53        89.33        54.71 
TCGA-EE-A2GN TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2MC 
       90.94        14.30        55.59        67.13        21.67        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A2ML TCGA-EE-A2MM 
       47.28       103.27       103.17       204.62       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MT TCGA-EE-A3AC TCGA-EE-A3AD TCGA-ER-A19D 
       47.54       248.61        41.59        25.84         3.68        12.59 
TCGA-ER-A19F TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YY 
       26.37       131.08        44.05        79.99       216.92       228.59 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZJ 
       20.91        28.08        27.68        48.85        40.27        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       23.93        74.73        53.16        26.56        49.48        27.06 
TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 
       77.79        12.43        49.45        22.98        47.54        76.41 
TCGA-GN-A262 
      120.46 

  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                       0.20                        3.68 
  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                     357.37                      314.53 
  AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE 
                      48.89                       47.28 
[1] "0.2 - 357.4 (48.9)" "3.7 - 314.5 (47.3)"
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "AMP PEAK 11(7Q34) MUTATED" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK 11(7Q34) WILD-TYPE" "AMP PEAK 11(7Q34) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"AMP PEAK 11(7Q34) WILD-TYPE"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "AMP PEAK 11(7Q34) MUTATED"   "AMP PEAK 11(7Q34) MUTATED" 
[1] "hr=" "1"  
D11V2, continuous
                             vv
clus                          DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 11(7Q34) MUTATED                   13             1
  AMP PEAK 11(7Q34) WILD-TYPE                 12             0
                             vv
clus                          REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 11(7Q34) MUTATED                                                                                         23
  AMP PEAK 11(7Q34) WILD-TYPE                                                                                       12
                             vv
clus                          REGIONAL LYMPH NODE
  AMP PEAK 11(7Q34) MUTATED                    62
  AMP PEAK 11(7Q34) WILD-TYPE                  50
D11V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 11(7Q34) MUTATED
  DISTANT METASTASIS                                                                                              13
  PRIMARY TUMOR                                                                                                    1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                        23
  REGIONAL LYMPH NODE                                                                                             62
                                                                                          clus
vv                                                                                         AMP PEAK 11(7Q34) WILD-TYPE
  DISTANT METASTASIS                                                                                                12
  PRIMARY TUMOR                                                                                                      0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          12
  REGIONAL LYMPH NODE                                                                                               50
D11V4, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 11(7Q34) MUTATED     41   58
  AMP PEAK 11(7Q34) WILD-TYPE   26   48
        clus
vv       AMP PEAK 11(7Q34) MUTATED AMP PEAK 11(7Q34) WILD-TYPE
  FEMALE                        41                          26
  MALE                          58                          48
                             vv
clus                          M0 M1 M1A M1B M1C
  AMP PEAK 11(7Q34) MUTATED   84  2   2   1   2
  AMP PEAK 11(7Q34) WILD-TYPE 66  0   0   1   0
D11V5, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 11(7Q34) MUTATED   49  1   6  11  0   4   6   4  9  2
  AMP PEAK 11(7Q34) WILD-TYPE 46  1   1   5  1   0   5   1  7  0
D11V6, multiclass
D11V7, continuous
                             vv
clus                          I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 11(7Q34) MUTATED             4       7        6        4       12
  AMP PEAK 11(7Q34) WILD-TYPE           0      10        4       10        7
                             vv
clus                          STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 11(7Q34) MUTATED           4         2         6         5
  AMP PEAK 11(7Q34) WILD-TYPE         4         8         2         4
                             vv
clus                          STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 11(7Q34) MUTATED            6         13         12        5
  AMP PEAK 11(7Q34) WILD-TYPE          0          5         11        1
D11V8, multiclass

Clustering(12) Variable = Amp Peak 12(8q11.21) mutation analysis
D12V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 12(8Q11.21) MUTATED   33 36
  AMP PEAK 12(8Q11.21) WILD-TYPE 50 51
  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                            69                            101 
  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                            36                             51 
$`AMP PEAK 12(8Q11.21) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q6 TCGA-D3-A2J6 TCGA-D3-A2JF TCGA-D3-A3C6 TCGA-D3-A3CC 
       16.57        71.80        43.40        48.76        58.03        71.24 
TCGA-D3-A3CE TCGA-D3-A3MV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I2 
       60.23        21.47        36.03       117.17       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A3F5 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A20B TCGA-EE-A29C 
       35.93       215.44         8.65        33.73       109.64        47.84 
TCGA-EE-A29E TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A5 TCGA-EE-A2GD 
       39.62        14.47       345.96        25.87        39.25       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
      135.91       182.01        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MH TCGA-EE-A2MN 
       13.87       129.24        28.80        19.76        16.96        47.54 
TCGA-EE-A2MR TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG TCGA-ER-A19J 
      103.56       122.73         3.68        26.73        23.47         6.41 
TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3ET TCGA-FR-A44A TCGA-FS-A1YX 
      131.08        61.05        44.05        80.32       160.60        48.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZK 
      202.62        28.08         7.76       357.37        53.52        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
      101.26        74.73       133.55        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-GN-A264 TCGA-GN-A265 
       26.56        27.06        50.14         0.20       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        32.48        39.58 

$`AMP PEAK 12(8Q11.21) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J8 TCGA-D3-A2J9 
      112.54       121.22        28.08        31.59        65.49        23.77 
TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 
       11.87        12.10        24.53         9.30       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1I0 
        2.70         6.38        11.34         3.22        48.89        20.38 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC 
      107.34        61.18        53.92        65.92        23.44        68.09 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A183 
       28.60        10.49        15.68        29.82        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29H 
        4.93        78.87       168.26        63.32        13.97        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S 
        2.56        44.35        18.58        56.42        37.35        55.89 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB 
       17.92        46.82        78.94        24.43        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GR TCGA-EE-A2GS 
       43.23        22.55        89.33        54.71        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
       19.56        67.13        21.67        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
      103.17       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       136.44        41.59        53.26         4.24 
TCGA-EE-A3AC TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A1A1 
       25.84        13.81       138.77        12.59        26.37        79.99 
TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1ZA 
       33.21        80.48       216.92       228.59        20.91        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       48.85        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZW TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 
       49.48        27.02        77.79        12.43        49.45        22.98 
TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A266 TCGA-GN-A268 
       47.54        76.41       120.46        10.09        62.76 

  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                          0.20                           2.56 
  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                        357.37                         248.61 
  AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE 
                         53.16                          44.35 
[1] "0.2 - 357.4 (53.2)" "2.6 - 248.6 (44.4)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 12(8Q11.21) WILD-TYPE" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 12(8Q11.21) WILD-TYPE"   "AMP PEAK 12(8Q11.21) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 12(8Q11.21) MUTATED" "AMP PEAK 12(8Q11.21) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 12(8Q11.21) MUTATED"   "AMP PEAK 12(8Q11.21) MUTATED" 
[1] "hr=" "1.3"
D12V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 12(8Q11.21) MUTATED                   11             0
  AMP PEAK 12(8Q11.21) WILD-TYPE                 14             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 12(8Q11.21) MUTATED                                                                                         18
  AMP PEAK 12(8Q11.21) WILD-TYPE                                                                                       17
                                vv
clus                             REGIONAL LYMPH NODE
  AMP PEAK 12(8Q11.21) MUTATED                    41
  AMP PEAK 12(8Q11.21) WILD-TYPE                  71
D12V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 12(8Q11.21) MUTATED
  DISTANT METASTASIS                                                                                                 11
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           18
  REGIONAL LYMPH NODE                                                                                                41
                                                                                          clus
vv                                                                                         AMP PEAK 12(8Q11.21) WILD-TYPE
  DISTANT METASTASIS                                                                                                   14
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             17
  REGIONAL LYMPH NODE                                                                                                  71
D12V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 12(8Q11.21) MUTATED     26   44
  AMP PEAK 12(8Q11.21) WILD-TYPE   41   62
        clus
vv       AMP PEAK 12(8Q11.21) MUTATED AMP PEAK 12(8Q11.21) WILD-TYPE
  FEMALE                           26                             41
  MALE                             44                             62
                                vv
clus                             M0 M1 M1A M1B M1C
  AMP PEAK 12(8Q11.21) MUTATED   60  2   0   0   0
  AMP PEAK 12(8Q11.21) WILD-TYPE 90  0   2   2   2
D12V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 12(8Q11.21) MUTATED   39  1   4   8  0   1   3   1  5  1
  AMP PEAK 12(8Q11.21) WILD-TYPE 56  1   3   8  1   3   8   4 11  1
D12V6, multiclass
D12V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 12(8Q11.21) MUTATED             2       7        3        4       10
  AMP PEAK 12(8Q11.21) WILD-TYPE           2      10        7       10        9
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 12(8Q11.21) MUTATED           3         4         5         6
  AMP PEAK 12(8Q11.21) WILD-TYPE         5         6         3         3
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 12(8Q11.21) MUTATED            3          5          8        2
  AMP PEAK 12(8Q11.21) WILD-TYPE          3         13         15        4
D12V8, multiclass

Clustering(13) Variable = Amp Peak 13(8q24.21) mutation analysis
D13V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 13(8Q24.21) MUTATED   37 43
  AMP PEAK 13(8Q24.21) WILD-TYPE 46 44
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                            80                             90 
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                            43                             44 
$`AMP PEAK 13(8Q24.21) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q6 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2JF TCGA-D3-A3C6 
       16.57        71.80        31.59        43.40        48.76        58.03 
TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JW TCGA-DA-A1HW 
       71.24        60.23         9.30        21.47         2.70        36.03 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A3F3 
      117.17        20.38       194.83       176.55        35.93        10.49 
TCGA-DA-A3F5 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A20B TCGA-EE-A29C TCGA-EE-A29E 
      215.44         8.65        33.73       109.64        47.84        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       32.19         2.56        14.47        55.89       345.96        25.87 
TCGA-EE-A2A5 TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GL TCGA-EE-A2GM 
       39.25       314.53       135.91       182.01        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2M6 TCGA-EE-A2M7 
       90.94       101.95        13.87        55.59       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR 
       19.76        16.96        96.23        47.54       248.61       103.56 
TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG TCGA-ER-A19J TCGA-ER-A19L 
      122.73         3.68        26.73        23.47         6.41       131.08 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3ET TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX 
       61.05        44.05        80.32       160.60       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZC TCGA-FS-A1ZD 
      228.59       202.62        28.08         7.76       357.37        53.52 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS 
       23.93       101.26        74.73       133.55        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-GN-A267 
       53.16        26.56        27.06        50.14         0.20        64.41 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

$`AMP PEAK 13(8Q24.21) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD 
      112.54       121.22        28.08        65.49        23.77        11.87 
TCGA-D3-A2JK TCGA-D3-A3CF TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z1 
       12.10        24.53       148.31        49.74         6.38        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
        3.22        48.89       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A182 
       23.44        68.09        28.60        15.68        29.82        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29D 
       26.86         4.93        78.87       168.26        63.32        13.97 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29X TCGA-EE-A2A0 
       44.35        18.58        56.42        37.35        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GI 
       78.94        24.43        58.75        47.54        43.23        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
       89.33        54.71        14.30        19.56        67.13        21.67 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A2MK 
       61.51        47.28       103.27       103.17       204.62       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      203.01       167.87        43.23       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
        4.24        25.84        13.81       138.77        12.59        26.37 
TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1Z3 TCGA-FS-A1ZA TCGA-FS-A1ZB 
       79.99        33.21        80.48        20.91        27.68        48.85 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZW 
       40.27        15.45         9.70        32.71        47.38        49.48 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU 
       27.02        77.79        12.43        49.45        22.98        47.54 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A268 
       76.41       120.46       117.93        84.72        10.09        62.76 

  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                          0.20                           3.22 
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                        357.37                         204.62 
  AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE 
                         49.45                          47.05 
[1] "0.2 - 357.4 (49.5)" "3.2 - 204.6 (47.0)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 13(8Q24.21) WILD-TYPE"   "AMP PEAK 13(8Q24.21) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 13(8Q24.21) WILD-TYPE" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 13(8Q24.21) MUTATED" "AMP PEAK 13(8Q24.21) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 13(8Q24.21) MUTATED"   "AMP PEAK 13(8Q24.21) MUTATED" 
[1] "hr=" "1.2"
D13V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 13(8Q24.21) MUTATED                   12             0
  AMP PEAK 13(8Q24.21) WILD-TYPE                 13             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 13(8Q24.21) MUTATED                                                                                         20
  AMP PEAK 13(8Q24.21) WILD-TYPE                                                                                       15
                                vv
clus                             REGIONAL LYMPH NODE
  AMP PEAK 13(8Q24.21) MUTATED                    50
  AMP PEAK 13(8Q24.21) WILD-TYPE                  62
D13V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 13(8Q24.21) MUTATED
  DISTANT METASTASIS                                                                                                 12
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           20
  REGIONAL LYMPH NODE                                                                                                50
                                                                                          clus
vv                                                                                         AMP PEAK 13(8Q24.21) WILD-TYPE
  DISTANT METASTASIS                                                                                                   13
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             15
  REGIONAL LYMPH NODE                                                                                                  62
D13V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 13(8Q24.21) MUTATED     30   52
  AMP PEAK 13(8Q24.21) WILD-TYPE   37   54
        clus
vv       AMP PEAK 13(8Q24.21) MUTATED AMP PEAK 13(8Q24.21) WILD-TYPE
  FEMALE                           30                             37
  MALE                             52                             54
                                vv
clus                             M0 M1 M1A M1B M1C
  AMP PEAK 13(8Q24.21) MUTATED   73  2   1   0   0
  AMP PEAK 13(8Q24.21) WILD-TYPE 77  0   1   2   2
D13V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 13(8Q24.21) MUTATED   46  1   4   9  0   3   4   2  7  1
  AMP PEAK 13(8Q24.21) WILD-TYPE 49  1   3   7  1   1   7   3  9  1
D13V6, multiclass
D13V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 13(8Q24.21) MUTATED             2       8        4        6       11
  AMP PEAK 13(8Q24.21) WILD-TYPE           2       9        6        8        8
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 13(8Q24.21) MUTATED           5         4         5         7
  AMP PEAK 13(8Q24.21) WILD-TYPE         3         6         3         2
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 13(8Q24.21) MUTATED            3          8         10        2
  AMP PEAK 13(8Q24.21) WILD-TYPE          3         10         13        4
D13V8, multiclass

Clustering(14) Variable = Amp Peak 14(9p24.1) mutation analysis
D14V1, survival
                               sevent
clus2                            0  1
  AMP PEAK 14(9P24.1) MUTATED    5  8
  AMP PEAK 14(9P24.1) WILD-TYPE 78 79
  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                           13                           157 
  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                            8                            79 
$`AMP PEAK 14(9P24.1) MUTATED`
TCGA-D3-A1Q9 TCGA-DA-A1I5 TCGA-DA-A3F3 TCGA-EE-A29A TCGA-EE-A2M5 TCGA-EE-A2MU 
       31.59       107.34        10.49        63.32        21.67        53.26 
TCGA-ER-A19M TCGA-ER-A3ET TCGA-FS-A1Z0 TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FW-A3I3 
       61.05        80.32       202.62        47.38        23.93         0.20 
TCGA-GN-A262 
      120.46 

$`AMP PEAK 14(9P24.1) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J6 
       16.57       112.54        71.80       121.22        28.08        43.40 
TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 
       65.49        23.77        11.87        48.76        12.10        58.03 
TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 
       71.24        60.23        24.53         9.30        21.47       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV 
       49.74         2.70         6.38        11.34         3.22        48.89 
TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 
       36.03       117.17        20.38       194.83       176.55        35.93 
TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
       61.18        53.92        65.92        23.44        68.09        28.60 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 
      215.44        15.68        29.82         8.65        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29C 
       26.86         4.93       109.64        78.87       168.26        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       56.42        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
       13.87        14.30        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW 
       44.05        79.99        33.21        80.48       160.60       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
       48.59       228.59        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       48.85       357.37        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS 
       32.71       101.26        74.73       133.55        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 
       53.16        26.56        49.48        27.06        27.02        77.79 
TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 
       50.14        12.43        49.45        22.98        47.54        76.41 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 
TCGA-GN-A26D 
       39.58 

  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                         0.20                          2.56 
  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                       202.62                        357.37 
  AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE 
                        53.26                         47.54 
[1] "0.2 - 202.6 (53.3)" "2.6 - 357.4 (47.5)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "AMP PEAK 14(9P24.1) MUTATED"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "AMP PEAK 14(9P24.1) MUTATED"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"AMP PEAK 14(9P24.1) WILD-TYPE"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "AMP PEAK 14(9P24.1) MUTATED"   "AMP PEAK 14(9P24.1) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "AMP PEAK 14(9P24.1) MUTATED" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"AMP PEAK 14(9P24.1) WILD-TYPE" "AMP PEAK 14(9P24.1) WILD-TYPE" 
[1] "hr=" "1.3"
D14V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 14(9P24.1) MUTATED                    5             0
  AMP PEAK 14(9P24.1) WILD-TYPE                 20             1
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 14(9P24.1) MUTATED                                                                                          3
  AMP PEAK 14(9P24.1) WILD-TYPE                                                                                       32
                               vv
clus                            REGIONAL LYMPH NODE
  AMP PEAK 14(9P24.1) MUTATED                     5
  AMP PEAK 14(9P24.1) WILD-TYPE                 107
D14V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 14(9P24.1) MUTATED
  DISTANT METASTASIS                                                                                                 5
  PRIMARY TUMOR                                                                                                      0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           3
  REGIONAL LYMPH NODE                                                                                                5
                                                                                          clus
vv                                                                                         AMP PEAK 14(9P24.1) WILD-TYPE
  DISTANT METASTASIS                                                                                                  20
  PRIMARY TUMOR                                                                                                        1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            32
  REGIONAL LYMPH NODE                                                                                                107
D14V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  AMP PEAK 14(9P24.1) MUTATED      6    7
  AMP PEAK 14(9P24.1) WILD-TYPE   61   99
        clus
vv       AMP PEAK 14(9P24.1) MUTATED AMP PEAK 14(9P24.1) WILD-TYPE
  FEMALE                           6                            61
  MALE                             7                            99
                               vv
clus                             M0  M1 M1A M1B M1C
  AMP PEAK 14(9P24.1) MUTATED    10   1   0   0   1
  AMP PEAK 14(9P24.1) WILD-TYPE 140   1   2   2   1
D14V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 14(9P24.1) MUTATED    8  0   2   0  0   1   1   0  0  0
  AMP PEAK 14(9P24.1) WILD-TYPE 87  2   5  16  1   3  10   5 16  2
D14V6, multiclass
D14V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 14(9P24.1) MUTATED             0       2        2        1        1
  AMP PEAK 14(9P24.1) WILD-TYPE           4      15        8       13       18
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 14(9P24.1) MUTATED           0         0         0         0
  AMP PEAK 14(9P24.1) WILD-TYPE         8        10         8         9
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 14(9P24.1) MUTATED            2          2          0        2
  AMP PEAK 14(9P24.1) WILD-TYPE          4         16         23        4
D14V8, multiclass

Clustering(15) Variable = Amp Peak 15(11q13.3) mutation analysis
D15V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 15(11Q13.3) MUTATED   11 17
  AMP PEAK 15(11Q13.3) WILD-TYPE 72 70
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                            28                            142 
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                            17                             70 
$`AMP PEAK 15(11Q13.3) MUTATED`
TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2JF TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D9-A3Z3 
       31.59        43.40        48.76        60.23        24.53         3.22 
TCGA-DA-A3F3 TCGA-EE-A20F TCGA-EE-A2GB TCGA-EE-A2GH TCGA-EE-A2GP TCGA-EE-A2GR 
       10.49        78.87        47.54       182.01        13.87        14.30 
TCGA-EE-A2M5 TCGA-EE-A2MC TCGA-EE-A2MM TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3ET 
       21.67        61.51       167.87        61.05        44.05        80.32 
TCGA-FS-A1YW TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZK TCGA-FS-A1ZS TCGA-FS-A1ZT 
      216.92        48.85        53.52        23.93       148.77        53.16 
TCGA-FS-A4F2 TCGA-GN-A266 TCGA-GN-A268 TCGA-GN-A26D 
       50.14        10.09        62.76        39.58 

$`AMP PEAK 15(11Q13.3) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J8 
       16.57       112.54        71.80       121.22        28.08        65.49 
TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MO 
       23.77        11.87        12.10        58.03        71.24         9.30 
TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 
       21.47       148.31        49.74         2.70         6.38        11.34 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 
       48.89        36.03       117.17        20.38       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       35.93       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
       68.09        28.60       215.44        15.68        29.82         8.65 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H 
       33.73        14.70        26.86         4.93       109.64       168.26 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
       63.32        47.84        13.97        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S 
       44.35        18.58        56.42        37.35        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI 
       39.25        58.75        43.23       314.53       135.91        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       55.59        19.56        67.13       129.24        28.80        19.76 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      144.76       203.01        47.54       248.61        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
      136.44        41.59        53.26         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN 
       26.37         6.41       131.08        79.99        33.21        80.48 
TCGA-FR-A44A TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
      160.60        48.59       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZC TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
        7.76        27.68       357.37        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR 
       32.71        47.38       101.26        74.73       133.55        11.41 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 
       26.56        49.48        27.06        27.02        77.79        12.43 
TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 
       49.45         0.20        22.98        47.54        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A26A 
      117.93        84.72        64.41        32.48 

  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                          3.22                           0.20 
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                        216.92                         357.37 
  AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE 
                        48.805                         47.460 
[1] "3.2 - 216.9 (48.8)" "0.2 - 357.4 (47.5)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "AMP PEAK 15(11Q13.3) MUTATED" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 15(11Q13.3) MUTATED"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 15(11Q13.3) WILD-TYPE" "AMP PEAK 15(11Q13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 15(11Q13.3) WILD-TYPE"   "AMP PEAK 15(11Q13.3) MUTATED" 
[1] "hr=" "1.3"
D15V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 15(11Q13.3) MUTATED                    6             0
  AMP PEAK 15(11Q13.3) WILD-TYPE                 19             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 15(11Q13.3) MUTATED                                                                                          4
  AMP PEAK 15(11Q13.3) WILD-TYPE                                                                                       31
                                vv
clus                             REGIONAL LYMPH NODE
  AMP PEAK 15(11Q13.3) MUTATED                    19
  AMP PEAK 15(11Q13.3) WILD-TYPE                  93
D15V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 15(11Q13.3) MUTATED
  DISTANT METASTASIS                                                                                                  6
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            4
  REGIONAL LYMPH NODE                                                                                                19
                                                                                          clus
vv                                                                                         AMP PEAK 15(11Q13.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   19
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             31
  REGIONAL LYMPH NODE                                                                                                  93
D15V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 15(11Q13.3) MUTATED      8   21
  AMP PEAK 15(11Q13.3) WILD-TYPE   59   85
        clus
vv       AMP PEAK 15(11Q13.3) MUTATED AMP PEAK 15(11Q13.3) WILD-TYPE
  FEMALE                            8                             59
  MALE                             21                             85
                                vv
clus                              M0  M1 M1A M1B M1C
  AMP PEAK 15(11Q13.3) MUTATED    26   0   0   0   0
  AMP PEAK 15(11Q13.3) WILD-TYPE 124   2   2   2   2
D15V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 15(11Q13.3) MUTATED   18  0   3   3  0   1   1   0  1  0
  AMP PEAK 15(11Q13.3) WILD-TYPE 77  2   4  13  1   3  10   5 15  2
D15V6, multiclass
D15V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 15(11Q13.3) MUTATED             1       4        1        2        5
  AMP PEAK 15(11Q13.3) WILD-TYPE           3      13        9       12       14
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 15(11Q13.3) MUTATED           1         2         2         2
  AMP PEAK 15(11Q13.3) WILD-TYPE         7         8         6         7
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 15(11Q13.3) MUTATED            2          4          1        0
  AMP PEAK 15(11Q13.3) WILD-TYPE          4         14         22        6
D15V8, multiclass

Clustering(16) Variable = Amp Peak 16(11q13.4) mutation analysis
D16V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 16(11Q13.4) MUTATED   11 16
  AMP PEAK 16(11Q13.4) WILD-TYPE 72 71
  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                            27                            143 
  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                            16                             71 
$`AMP PEAK 16(11Q13.4) MUTATED`
TCGA-D3-A2J6 TCGA-D3-A2JF TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D9-A3Z3 TCGA-EE-A2GB 
       43.40        48.76        60.23        24.53         3.22        47.54 
TCGA-EE-A2GC TCGA-EE-A2GH TCGA-EE-A2GP TCGA-EE-A2M5 TCGA-EE-A2MC TCGA-EE-A2MM 
       43.23       182.01        13.87        21.67        61.51       167.87 
TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FS-A1YW 
      131.08        61.05        44.05        80.32        33.21       216.92 
TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZK TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A4F2 
       48.85        53.52        23.93       148.77        53.16        50.14 
TCGA-GN-A266 TCGA-GN-A268 TCGA-GN-A26D 
       10.09        62.76        39.58 

$`AMP PEAK 16(11Q13.4) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 
       16.57       112.54        71.80       121.22        28.08        31.59 
TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC 
       65.49        23.77        11.87        12.10        58.03        71.24 
TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX 
        9.30        21.47       148.31        49.74         2.70         6.38 
TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 
       11.34        48.89        36.03       117.17        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GD 
       46.82        78.94        24.43        39.25        58.75       314.53 
TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      135.91        22.55        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
       90.94       101.95        14.30        55.59        19.56        67.13 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
      129.24        28.80        19.76        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN 
       16.96       204.62        96.23       144.76       203.01        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
      248.61        43.23       103.56       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A1A1 
       23.47       138.77        12.59        26.37         6.41        79.99 
TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.48       160.60        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZC TCGA-FS-A1ZE TCGA-FS-A1ZF 
       28.08         7.76        27.68       357.37        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZQ 
        9.70        32.71        47.38       101.26        74.73       133.55 
TCGA-FS-A1ZR TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 
       11.41        26.56        49.48        27.06        27.02        77.79 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 
       12.43        49.45         0.20        22.98        47.54        76.41 
TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A26A 
      120.46       117.93        84.72        64.41        32.48 

  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                          3.22                           0.20 
  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                        216.92                         357.37 
  AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE 
                         48.85                          47.38 
[1] "3.2 - 216.9 (48.9)" "0.2 - 357.4 (47.4)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 16(11Q13.4) MUTATED" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 16(11Q13.4) MUTATED"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 16(11Q13.4) WILD-TYPE" "AMP PEAK 16(11Q13.4) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 16(11Q13.4) WILD-TYPE"   "AMP PEAK 16(11Q13.4) MUTATED" 
[1] "hr=" "1.2"
D16V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 16(11Q13.4) MUTATED                    6             0
  AMP PEAK 16(11Q13.4) WILD-TYPE                 19             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 16(11Q13.4) MUTATED                                                                                          4
  AMP PEAK 16(11Q13.4) WILD-TYPE                                                                                       31
                                vv
clus                             REGIONAL LYMPH NODE
  AMP PEAK 16(11Q13.4) MUTATED                    18
  AMP PEAK 16(11Q13.4) WILD-TYPE                  94
D16V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 16(11Q13.4) MUTATED
  DISTANT METASTASIS                                                                                                  6
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            4
  REGIONAL LYMPH NODE                                                                                                18
                                                                                          clus
vv                                                                                         AMP PEAK 16(11Q13.4) WILD-TYPE
  DISTANT METASTASIS                                                                                                   19
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             31
  REGIONAL LYMPH NODE                                                                                                  94
D16V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 16(11Q13.4) MUTATED      8   20
  AMP PEAK 16(11Q13.4) WILD-TYPE   59   86
        clus
vv       AMP PEAK 16(11Q13.4) MUTATED AMP PEAK 16(11Q13.4) WILD-TYPE
  FEMALE                            8                             59
  MALE                             20                             86
                                vv
clus                              M0  M1 M1A M1B M1C
  AMP PEAK 16(11Q13.4) MUTATED    23   0   1   0   0
  AMP PEAK 16(11Q13.4) WILD-TYPE 127   2   1   2   2
D16V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 16(11Q13.4) MUTATED   18  0   3   3  0   0   0   0  1  0
  AMP PEAK 16(11Q13.4) WILD-TYPE 77  2   4  13  1   4  11   5 15  2
D16V6, multiclass
D16V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 16(11Q13.4) MUTATED             1       4        1        2        3
  AMP PEAK 16(11Q13.4) WILD-TYPE           3      13        9       12       16
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 16(11Q13.4) MUTATED           1         3         2         2
  AMP PEAK 16(11Q13.4) WILD-TYPE         7         7         6         7
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 16(11Q13.4) MUTATED            2          2          1        1
  AMP PEAK 16(11Q13.4) WILD-TYPE          4         16         22        5
D16V8, multiclass

Clustering(17) Variable = Amp Peak 17(12q14.1) mutation analysis
D17V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 17(12Q14.1) MUTATED   13 17
  AMP PEAK 17(12Q14.1) WILD-TYPE 70 70
  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                            30                            140 
  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                            17                             70 
$`AMP PEAK 17(12Q14.1) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q6 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A3C6 TCGA-D3-A3CC 
       16.57        71.80        31.59        43.40        58.03        71.24 
TCGA-D3-A3CF TCGA-D3-A3MV TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A3F5 TCGA-EE-A17Z 
       24.53        21.47        48.89        36.03       215.44         8.65 
TCGA-EE-A29D TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GH TCGA-EE-A2M5 TCGA-EE-A2MS 
       13.97        58.75        47.54       182.01        21.67       136.44 
TCGA-ER-A19M TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZK 
       61.05        80.32        33.21        40.27        15.45        23.93 
TCGA-FS-A1ZM TCGA-GN-A264 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
      101.26       117.93        64.41        62.76        32.48        39.58 

$`AMP PEAK 17(12Q14.1) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD 
      112.54       121.22        28.08        65.49        23.77        11.87 
TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3CE TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 
       48.76        12.10        60.23         9.30       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        11.34         3.22       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 
       65.92        23.44        68.09        28.60        10.49        15.68 
TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82        33.73        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H 
       78.87       168.26        63.32        47.84        39.62        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
        2.56        44.35        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       55.89       345.96        25.87        17.92        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI 
       24.43        39.25        43.23       314.53       135.91        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
       13.87        14.30        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       28.80        19.76        61.51        47.28       103.27       103.17 
TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       16.96       204.62        96.23       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU 
       47.54       248.61        43.23       103.56        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       23.47       138.77        12.59        26.37         6.41       131.08 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX 
       44.05        79.99        80.48       160.60       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
      228.59       202.62        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       48.85       357.37        53.52         9.70        32.71        47.38 
TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
       74.73       133.55        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 
       49.48        27.06        27.02        77.79        50.14        12.43 
TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 
       49.45         0.20        22.98        47.54        76.41       120.46 
TCGA-GN-A265 TCGA-GN-A266 
       84.72        10.09 

  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                          8.65                           0.20 
  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                        215.44                         357.37 
  AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE 
                         45.47                          47.69 
[1] "8.7 - 215.4 (45.5)" "0.2 - 357.4 (47.7)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 17(12Q14.1) MUTATED" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 17(12Q14.1) WILD-TYPE"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 17(12Q14.1) WILD-TYPE" "AMP PEAK 17(12Q14.1) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 17(12Q14.1) MUTATED"   "AMP PEAK 17(12Q14.1) MUTATED" 
[1] "hr=" "1.2"
D17V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 17(12Q14.1) MUTATED                    3             0
  AMP PEAK 17(12Q14.1) WILD-TYPE                 22             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 17(12Q14.1) MUTATED                                                                                          7
  AMP PEAK 17(12Q14.1) WILD-TYPE                                                                                       28
                                vv
clus                             REGIONAL LYMPH NODE
  AMP PEAK 17(12Q14.1) MUTATED                    20
  AMP PEAK 17(12Q14.1) WILD-TYPE                  92
D17V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 17(12Q14.1) MUTATED
  DISTANT METASTASIS                                                                                                  3
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            7
  REGIONAL LYMPH NODE                                                                                                20
                                                                                          clus
vv                                                                                         AMP PEAK 17(12Q14.1) WILD-TYPE
  DISTANT METASTASIS                                                                                                   22
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             28
  REGIONAL LYMPH NODE                                                                                                  92
D17V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 17(12Q14.1) MUTATED     12   18
  AMP PEAK 17(12Q14.1) WILD-TYPE   55   88
        clus
vv       AMP PEAK 17(12Q14.1) MUTATED AMP PEAK 17(12Q14.1) WILD-TYPE
  FEMALE                           12                             55
  MALE                             18                             88
                                vv
clus                              M0  M1 M1A M1B M1C
  AMP PEAK 17(12Q14.1) MUTATED    27   0   1   0   0
  AMP PEAK 17(12Q14.1) WILD-TYPE 123   2   1   2   2
D17V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 17(12Q14.1) MUTATED   15  0   4   3  0   2   1   1  3  0
  AMP PEAK 17(12Q14.1) WILD-TYPE 80  2   3  13  1   2  10   4 13  2
D17V6, multiclass
D17V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 17(12Q14.1) MUTATED             0       2        1        2        2
  AMP PEAK 17(12Q14.1) WILD-TYPE           4      15        9       12       17
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 17(12Q14.1) MUTATED           0         3         4         2
  AMP PEAK 17(12Q14.1) WILD-TYPE         8         7         4         7
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 17(12Q14.1) MUTATED            4          4          4        1
  AMP PEAK 17(12Q14.1) WILD-TYPE          2         14         19        5
D17V8, multiclass

Clustering(18) Variable = Amp Peak 18(12q15) mutation analysis
D18V1, survival
                              sevent
clus2                           0  1
  AMP PEAK 18(12Q15) MUTATED   11 13
  AMP PEAK 18(12Q15) WILD-TYPE 72 74
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                          24                          146 
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                          13                           74 
$`AMP PEAK 18(12Q15) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q6 TCGA-D3-A1Q9 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CF 
       16.57        71.80        31.59        58.03        71.24        24.53 
TCGA-D3-A3MV TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A3F5 TCGA-EE-A29D TCGA-EE-A2A6 
       21.47        48.89        36.03       215.44        13.97        58.75 
TCGA-EE-A2GB TCGA-EE-A2GH TCGA-EE-A2M5 TCGA-EE-A2MS TCGA-ER-A3ET TCGA-FS-A1ZK 
       47.54       182.01        21.67       136.44        80.32        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
      101.26       133.55        64.41        62.76        32.48        39.58 

$`AMP PEAK 18(12Q15) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J6 TCGA-D3-A2J8 TCGA-D3-A2J9 
      112.54       121.22        28.08        43.40        65.49        23.77 
TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3CE TCGA-D3-A3MO TCGA-D9-A148 
       11.87        48.76        12.10        60.23         9.30       148.31 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HY 
       49.74         2.70         6.38        11.34         3.22       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       20.38       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C 
        4.93       109.64        78.87       168.26        63.32        47.84 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GD 
       46.82        78.94        24.43        39.25        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      135.91        22.55        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       90.94       101.95        13.87        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       67.13       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
      203.01       167.87        47.54       248.61        43.23       103.56 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD 
       41.59        53.26         4.24       122.73        25.84         3.68 
TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
       26.73        13.81        23.47       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3PL 
        6.41       131.08        61.05        44.05        79.99        33.21 
TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       80.48       160.60       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC 
       20.91        28.08         7.76        27.68        48.85       357.37 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       27.06        27.02        77.79        50.14        12.43        49.45 
TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
        0.20        22.98        47.54        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A266 
       84.72        10.09 

  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                       13.97                         0.20 
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                      215.44                       357.37 
  AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE 
                       53.46                        47.46 
[1] "14.0 - 215.4 (53.5)" "0.2 - 357.4 (47.5)" 
                  TCGA-D3-A1Q1                   TCGA-D3-A1Q5 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A1Q6                   TCGA-D3-A1Q7 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A1Q8                   TCGA-D3-A1Q9 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A2J6                   TCGA-D3-A2J8 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A2J9                   TCGA-D3-A2JD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A2JF                   TCGA-D3-A2JK 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A3C6                   TCGA-D3-A3CC 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A3CE                   TCGA-D3-A3CF 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A3MO                   TCGA-D3-A3MV 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D9-A148                   TCGA-D9-A149 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A1JW                   TCGA-D9-A1JX 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A3Z1                   TCGA-D9-A3Z3 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1HV                   TCGA-DA-A1HW 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-DA-A1HY                   TCGA-DA-A1I0 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I1                   TCGA-DA-A1I2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I4                   TCGA-DA-A1I5 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I7                   TCGA-DA-A1I8 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1IA                   TCGA-DA-A1IB 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1IC                   TCGA-DA-A3F2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A3F3                   TCGA-DA-A3F5 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-DA-A3F8                   TCGA-EE-A17X 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A17Z                   TCGA-EE-A181 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A182                   TCGA-EE-A183 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A185                   TCGA-EE-A20B 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A20F                   TCGA-EE-A20H 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29A                   TCGA-EE-A29C 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29D                   TCGA-EE-A29E 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29H                   TCGA-EE-A29L 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29M                   TCGA-EE-A29N 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29P                   TCGA-EE-A29Q 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29R                   TCGA-EE-A29S 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29T                   TCGA-EE-A29V 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29X                   TCGA-EE-A2A0 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A1                   TCGA-EE-A2A2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A5                   TCGA-EE-A2A6 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2GB                   TCGA-EE-A2GC 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GD                   TCGA-EE-A2GE 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GH                   TCGA-EE-A2GI 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GJ                   TCGA-EE-A2GK 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GL                   TCGA-EE-A2GM 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GN                   TCGA-EE-A2GO 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GP                   TCGA-EE-A2GR 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GS                   TCGA-EE-A2GT 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GU                   TCGA-EE-A2M5 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2M6                   TCGA-EE-A2M7 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2M8                   TCGA-EE-A2MC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MD                   TCGA-EE-A2ME 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MG                   TCGA-EE-A2MH 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MI                   TCGA-EE-A2MJ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MK                   TCGA-EE-A2ML 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MM                   TCGA-EE-A2MN 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MP                   TCGA-EE-A2MQ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MR                   TCGA-EE-A2MS 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2MT                   TCGA-EE-A2MU 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AA                   TCGA-EE-A3AB 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AC                   TCGA-EE-A3AD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AE                   TCGA-EE-A3AF 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AG                   TCGA-EE-A3AH 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19D                   TCGA-ER-A19F 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19J                   TCGA-ER-A19L 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19M                   TCGA-ER-A19N 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A1A1                   TCGA-ER-A3ET 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-ER-A3PL                   TCGA-FR-A3YN 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FR-A44A                   TCGA-FS-A1YW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1YX                   TCGA-FS-A1YY 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1Z0                   TCGA-FS-A1Z3 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1Z4                   TCGA-FS-A1Z7 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZA                   TCGA-FS-A1ZB 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZC                   TCGA-FS-A1ZD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZE                   TCGA-FS-A1ZF 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZG                   TCGA-FS-A1ZH 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZJ                   TCGA-FS-A1ZK 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-FS-A1ZM                   TCGA-FS-A1ZP 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZQ                   TCGA-FS-A1ZR 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZS                   TCGA-FS-A1ZT 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZU                   TCGA-FS-A1ZW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZY                   TCGA-FS-A1ZZ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A4F0                   TCGA-FS-A4F2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A4F9                   TCGA-FS-A4FC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FW-A3I3                   TCGA-FW-A3R5 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FW-A3TU                   TCGA-GN-A261 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A262                   TCGA-GN-A264 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A265                   TCGA-GN-A266 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A267                   TCGA-GN-A268 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-GN-A26A                   TCGA-GN-A26D 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A1Q1                   TCGA-D3-A1Q5 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A1Q6                   TCGA-D3-A1Q7 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A1Q8                   TCGA-D3-A1Q9 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A2J6                   TCGA-D3-A2J8 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A2J9                   TCGA-D3-A2JD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A2JF                   TCGA-D3-A2JK 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A3C6                   TCGA-D3-A3CC 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A3CE                   TCGA-D3-A3CF 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A3MO                   TCGA-D3-A3MV 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D9-A148                   TCGA-D9-A149 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A1JW                   TCGA-D9-A1JX 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A3Z1                   TCGA-D9-A3Z3 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1HV                   TCGA-DA-A1HW 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-DA-A1HY                   TCGA-DA-A1I0 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I1                   TCGA-DA-A1I2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I4                   TCGA-DA-A1I5 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I7                   TCGA-DA-A1I8 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1IA                   TCGA-DA-A1IB 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1IC                   TCGA-DA-A3F2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A3F3                   TCGA-DA-A3F5 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-DA-A3F8                   TCGA-EE-A17X 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A17Z                   TCGA-EE-A181 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A182                   TCGA-EE-A183 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A185                   TCGA-EE-A20B 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A20F                   TCGA-EE-A20H 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29A                   TCGA-EE-A29C 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29D                   TCGA-EE-A29E 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29H                   TCGA-EE-A29L 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29M                   TCGA-EE-A29N 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29P                   TCGA-EE-A29Q 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29R                   TCGA-EE-A29S 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29T                   TCGA-EE-A29V 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29X                   TCGA-EE-A2A0 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A1                   TCGA-EE-A2A2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A5                   TCGA-EE-A2A6 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2GB                   TCGA-EE-A2GC 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GD                   TCGA-EE-A2GE 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GH                   TCGA-EE-A2GI 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GJ                   TCGA-EE-A2GK 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GL                   TCGA-EE-A2GM 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GN                   TCGA-EE-A2GO 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GP                   TCGA-EE-A2GR 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GS                   TCGA-EE-A2GT 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GU                   TCGA-EE-A2M5 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2M6                   TCGA-EE-A2M7 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2M8                   TCGA-EE-A2MC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MD                   TCGA-EE-A2ME 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MG                   TCGA-EE-A2MH 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MI                   TCGA-EE-A2MJ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MK                   TCGA-EE-A2ML 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MM                   TCGA-EE-A2MN 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MP                   TCGA-EE-A2MQ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MR                   TCGA-EE-A2MS 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2MT                   TCGA-EE-A2MU 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AA                   TCGA-EE-A3AB 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AC                   TCGA-EE-A3AD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AE                   TCGA-EE-A3AF 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AG                   TCGA-EE-A3AH 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19D                   TCGA-ER-A19F 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19J                   TCGA-ER-A19L 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19M                   TCGA-ER-A19N 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A1A1                   TCGA-ER-A3ET 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-ER-A3PL                   TCGA-FR-A3YN 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FR-A44A                   TCGA-FS-A1YW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1YX                   TCGA-FS-A1YY 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1Z0                   TCGA-FS-A1Z3 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1Z4                   TCGA-FS-A1Z7 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZA                   TCGA-FS-A1ZB 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZC                   TCGA-FS-A1ZD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZE                   TCGA-FS-A1ZF 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZG                   TCGA-FS-A1ZH 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZJ                   TCGA-FS-A1ZK 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-FS-A1ZM                   TCGA-FS-A1ZP 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZQ                   TCGA-FS-A1ZR 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZS                   TCGA-FS-A1ZT 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZU                   TCGA-FS-A1ZW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZY                   TCGA-FS-A1ZZ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A4F0                   TCGA-FS-A4F2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A4F9                   TCGA-FS-A4FC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FW-A3I3                   TCGA-FW-A3R5 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FW-A3TU                   TCGA-GN-A261 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A262                   TCGA-GN-A264 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A265                   TCGA-GN-A266 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A267                   TCGA-GN-A268 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-GN-A26A                   TCGA-GN-A26D 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A1Q1                   TCGA-D3-A1Q5 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A1Q6                   TCGA-D3-A1Q7 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A1Q8                   TCGA-D3-A1Q9 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A2J6                   TCGA-D3-A2J8 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A2J9                   TCGA-D3-A2JD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A2JF                   TCGA-D3-A2JK 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D3-A3C6                   TCGA-D3-A3CC 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A3CE                   TCGA-D3-A3CF 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D3-A3MO                   TCGA-D3-A3MV 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-D9-A148                   TCGA-D9-A149 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A1JW                   TCGA-D9-A1JX 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-D9-A3Z1                   TCGA-D9-A3Z3 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1HV                   TCGA-DA-A1HW 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-DA-A1HY                   TCGA-DA-A1I0 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I1                   TCGA-DA-A1I2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I4                   TCGA-DA-A1I5 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1I7                   TCGA-DA-A1I8 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1IA                   TCGA-DA-A1IB 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A1IC                   TCGA-DA-A3F2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-DA-A3F3                   TCGA-DA-A3F5 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-DA-A3F8                   TCGA-EE-A17X 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A17Z                   TCGA-EE-A181 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A182                   TCGA-EE-A183 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A185                   TCGA-EE-A20B 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A20F                   TCGA-EE-A20H 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29A                   TCGA-EE-A29C 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29D                   TCGA-EE-A29E 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29H                   TCGA-EE-A29L 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29M                   TCGA-EE-A29N 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29P                   TCGA-EE-A29Q 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29R                   TCGA-EE-A29S 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29T                   TCGA-EE-A29V 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A29X                   TCGA-EE-A2A0 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A1                   TCGA-EE-A2A2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2A5                   TCGA-EE-A2A6 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2GB                   TCGA-EE-A2GC 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GD                   TCGA-EE-A2GE 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GH                   TCGA-EE-A2GI 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GJ                   TCGA-EE-A2GK 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GL                   TCGA-EE-A2GM 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GN                   TCGA-EE-A2GO 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GP                   TCGA-EE-A2GR 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GS                   TCGA-EE-A2GT 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2GU                   TCGA-EE-A2M5 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2M6                   TCGA-EE-A2M7 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2M8                   TCGA-EE-A2MC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MD                   TCGA-EE-A2ME 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MG                   TCGA-EE-A2MH 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MI                   TCGA-EE-A2MJ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MK                   TCGA-EE-A2ML 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MM                   TCGA-EE-A2MN 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MP                   TCGA-EE-A2MQ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A2MR                   TCGA-EE-A2MS 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-EE-A2MT                   TCGA-EE-A2MU 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AA                   TCGA-EE-A3AB 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AC                   TCGA-EE-A3AD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AE                   TCGA-EE-A3AF 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-EE-A3AG                   TCGA-EE-A3AH 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19D                   TCGA-ER-A19F 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19J                   TCGA-ER-A19L 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A19M                   TCGA-ER-A19N 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-ER-A1A1                   TCGA-ER-A3ET 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-ER-A3PL                   TCGA-FR-A3YN 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FR-A44A                   TCGA-FS-A1YW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1YX                   TCGA-FS-A1YY 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1Z0                   TCGA-FS-A1Z3 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1Z4                   TCGA-FS-A1Z7 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZA                   TCGA-FS-A1ZB 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZC                   TCGA-FS-A1ZD 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZE                   TCGA-FS-A1ZF 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZG                   TCGA-FS-A1ZH 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZJ                   TCGA-FS-A1ZK 
"AMP PEAK 18(12Q15) WILD-TYPE"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-FS-A1ZM                   TCGA-FS-A1ZP 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZQ                   TCGA-FS-A1ZR 
  "AMP PEAK 18(12Q15) MUTATED" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZS                   TCGA-FS-A1ZT 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZU                   TCGA-FS-A1ZW 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A1ZY                   TCGA-FS-A1ZZ 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A4F0                   TCGA-FS-A4F2 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FS-A4F9                   TCGA-FS-A4FC 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FW-A3I3                   TCGA-FW-A3R5 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-FW-A3TU                   TCGA-GN-A261 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A262                   TCGA-GN-A264 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A265                   TCGA-GN-A266 
"AMP PEAK 18(12Q15) WILD-TYPE" "AMP PEAK 18(12Q15) WILD-TYPE" 
                  TCGA-GN-A267                   TCGA-GN-A268 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
                  TCGA-GN-A26A                   TCGA-GN-A26D 
  "AMP PEAK 18(12Q15) MUTATED"   "AMP PEAK 18(12Q15) MUTATED" 
[1] "hr=" "1"  
D18V2, continuous
                              vv
clus                           DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 18(12Q15) MUTATED                    2             0
  AMP PEAK 18(12Q15) WILD-TYPE                 23             1
                              vv
clus                           REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 18(12Q15) MUTATED                                                                                          6
  AMP PEAK 18(12Q15) WILD-TYPE                                                                                       29
                              vv
clus                           REGIONAL LYMPH NODE
  AMP PEAK 18(12Q15) MUTATED                    16
  AMP PEAK 18(12Q15) WILD-TYPE                  96
D18V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 18(12Q15) MUTATED
  DISTANT METASTASIS                                                                                                2
  PRIMARY TUMOR                                                                                                     0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          6
  REGIONAL LYMPH NODE                                                                                              16
                                                                                          clus
vv                                                                                         AMP PEAK 18(12Q15) WILD-TYPE
  DISTANT METASTASIS                                                                                                 23
  PRIMARY TUMOR                                                                                                       1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           29
  REGIONAL LYMPH NODE                                                                                                96
D18V4, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  AMP PEAK 18(12Q15) MUTATED     11   13
  AMP PEAK 18(12Q15) WILD-TYPE   56   93
        clus
vv       AMP PEAK 18(12Q15) MUTATED AMP PEAK 18(12Q15) WILD-TYPE
  FEMALE                         11                           56
  MALE                           13                           93
                              vv
clus                            M0  M1 M1A M1B M1C
  AMP PEAK 18(12Q15) MUTATED    23   0   0   0   0
  AMP PEAK 18(12Q15) WILD-TYPE 127   2   2   2   2
D18V5, multiclass
                              vv
clus                           N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 18(12Q15) MUTATED   10  0   4   3  0   2   1   1  3  0
  AMP PEAK 18(12Q15) WILD-TYPE 85  2   3  13  1   2  10   4 13  2
D18V6, multiclass
D18V7, continuous
                              vv
clus                           I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 18(12Q15) MUTATED             1       2        1        1        2
  AMP PEAK 18(12Q15) WILD-TYPE           3      15        9       13       17
                              vv
clus                           STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 18(12Q15) MUTATED           0         1         2         2
  AMP PEAK 18(12Q15) WILD-TYPE         8         9         6         7
                              vv
clus                           STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 18(12Q15) MUTATED            4          4          4        0
  AMP PEAK 18(12Q15) WILD-TYPE          2         14         19        6
D18V8, multiclass

Clustering(19) Variable = Amp Peak 19(15q24.3) mutation analysis
D19V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 19(15Q24.3) MUTATED   26 31
  AMP PEAK 19(15Q24.3) WILD-TYPE 57 56
  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                            57                            113 
  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                            31                             56 
$`AMP PEAK 19(15Q24.3) MUTATED`
TCGA-D3-A1Q5 TCGA-D3-A1Q9 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A3CE 
      112.54        31.59        23.77        11.87        48.76        60.23 
TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I7 
       21.47       148.31        49.74        48.89        36.03        61.18 
TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A20F TCGA-EE-A20H 
       10.49       215.44        33.73        26.86        78.87       168.26 
TCGA-EE-A29D TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A1 TCGA-EE-A2GH TCGA-EE-A2GI 
       13.97       345.96        17.92        78.94       182.01        22.55 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 
       75.48        90.94       101.95        67.13       129.24        28.80 
TCGA-EE-A2MD TCGA-EE-A2MJ TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS 
       47.28        96.23        47.54       248.61        43.23       136.44 
TCGA-EE-A3AB TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19M 
      122.73        26.73        13.81        23.47        12.59        61.05 
TCGA-ER-A3ET TCGA-FR-A44A TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZC TCGA-FS-A1ZD 
       80.32       160.60        20.91         7.76       357.37        53.52 
TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZY TCGA-FS-A4F2 TCGA-FW-A3R5 TCGA-GN-A264 
       74.73       133.55        27.06        50.14        22.98       117.93 
TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A26A 
       84.72        64.41        32.48 

$`AMP PEAK 19(15Q24.3) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J6 TCGA-D3-A2J8 
       16.57        71.80       121.22        28.08        43.40        65.49 
TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D9-A1JW 
       12.10        58.03        71.24        24.53         9.30         2.70 
TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 
        6.38        11.34         3.22       117.17        20.38       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
      176.55        35.93       107.34        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 
       68.09        28.60        15.68        29.82         8.65        14.70 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H 
        4.93       109.64        63.32        47.84        39.62        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
        2.56        44.35        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       55.89        25.87        46.82        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GJ TCGA-EE-A2GK 
       47.54        43.23       314.53       135.91        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M5 
       55.00        13.87        14.30        55.59        19.56        21.67 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       19.76        61.51       103.27       103.17        16.96       204.62 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU 
      144.76       203.01       167.87       103.56        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J 
        4.24        25.84         3.68       138.77        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YW 
      131.08        44.05        79.99        33.21        80.48       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB 
       48.59       228.59       202.62        28.08        27.68        48.85 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK 
       40.27        15.45         9.70        32.71        47.38        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW 
      101.26        11.41       148.77        53.16        26.56        49.48 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3TU 
       27.02        77.79        12.43        49.45         0.20        47.54 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A266 TCGA-GN-A268 TCGA-GN-A26D 
       76.41       120.46        10.09        62.76        39.58 

  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                          7.76                           0.20 
  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                        357.37                         314.53 
  AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE 
                         53.52                          44.05 
[1] "7.8 - 357.4 (53.5)" "0.2 - 314.5 (44.0)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 19(15Q24.3) MUTATED"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 19(15Q24.3) WILD-TYPE" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 19(15Q24.3) WILD-TYPE"   "AMP PEAK 19(15Q24.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 19(15Q24.3) MUTATED" "AMP PEAK 19(15Q24.3) WILD-TYPE" 
[1] "hr=" "1.2"
D19V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 19(15Q24.3) MUTATED                    8             0
  AMP PEAK 19(15Q24.3) WILD-TYPE                 17             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 19(15Q24.3) MUTATED                                                                                         10
  AMP PEAK 19(15Q24.3) WILD-TYPE                                                                                       25
                                vv
clus                             REGIONAL LYMPH NODE
  AMP PEAK 19(15Q24.3) MUTATED                    40
  AMP PEAK 19(15Q24.3) WILD-TYPE                  72
D19V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 19(15Q24.3) MUTATED
  DISTANT METASTASIS                                                                                                  8
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           10
  REGIONAL LYMPH NODE                                                                                                40
                                                                                          clus
vv                                                                                         AMP PEAK 19(15Q24.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   17
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             25
  REGIONAL LYMPH NODE                                                                                                  72
D19V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 19(15Q24.3) MUTATED     22   36
  AMP PEAK 19(15Q24.3) WILD-TYPE   45   70
        clus
vv       AMP PEAK 19(15Q24.3) MUTATED AMP PEAK 19(15Q24.3) WILD-TYPE
  FEMALE                           22                             45
  MALE                             36                             70
                                vv
clus                             M0 M1 M1A M1B M1C
  AMP PEAK 19(15Q24.3) MUTATED   51  0   0   1   0
  AMP PEAK 19(15Q24.3) WILD-TYPE 99  2   2   1   2
D19V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 19(15Q24.3) MUTATED   32  0   3   6  1   3   3   0  3  1
  AMP PEAK 19(15Q24.3) WILD-TYPE 63  2   4  10  0   1   8   5 13  1
D19V6, multiclass
D19V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 19(15Q24.3) MUTATED             4       6        4        4        9
  AMP PEAK 19(15Q24.3) WILD-TYPE           0      11        6       10       10
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 19(15Q24.3) MUTATED           2         1         2         2
  AMP PEAK 19(15Q24.3) WILD-TYPE         6         9         6         7
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 19(15Q24.3) MUTATED            4          6          5        0
  AMP PEAK 19(15Q24.3) WILD-TYPE          2         12         18        6
D19V8, multiclass

Clustering(20) Variable = Amp Peak 20(17q25.3) mutation analysis
D20V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 20(17Q25.3) MUTATED   36 30
  AMP PEAK 20(17Q25.3) WILD-TYPE 47 57
  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                            66                            104 
  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                            30                             57 
$`AMP PEAK 20(17Q25.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A3CC TCGA-D3-A3CF 
       16.57        31.59        11.87        48.76        71.24        24.53 
TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A1JW TCGA-DA-A1HV TCGA-DA-A1HY 
        9.30        21.47       148.31         2.70        48.89       117.17 
TCGA-DA-A1I1 TCGA-DA-A1I7 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 TCGA-DA-A3F5 
      194.83        61.18        65.92        68.09        10.49       215.44 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29D 
       33.73        14.70         4.93        78.87       168.26        13.97 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29V 
       32.19         2.56        18.58        56.42        14.47        25.87 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GM 
       58.75        47.54        43.23       182.01        22.55        75.48 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2M7 TCGA-EE-A2MD TCGA-EE-A2MH TCGA-EE-A2MI 
       13.87        14.30        28.80        47.28        16.96       204.62 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AC 
       47.54       248.61       103.56       136.44        41.59        25.84 
TCGA-EE-A3AE TCGA-ER-A19F TCGA-ER-A19N TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN 
       26.73        26.37        44.05        80.32        33.21        80.48 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1ZD TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZQ 
      216.92        48.59        53.52        23.93       101.26       133.55 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FW-A3I3 TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26D 
       53.16        26.56         0.20        84.72        62.76        39.58 

$`AMP PEAK 20(17Q25.3) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J6 TCGA-D3-A2J8 
      112.54        71.80       121.22        28.08        43.40        65.49 
TCGA-D3-A2J9 TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CE TCGA-D9-A149 TCGA-D9-A1JX 
       23.77        12.10        58.03        60.23        49.74         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 
       11.34         3.22        36.03        20.38       176.55        35.93 
TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X 
      107.34        53.92        23.44        28.60        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E 
        8.65        26.86       109.64        63.32        47.84        39.62 
TCGA-EE-A29M TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 
       44.35        37.35        55.89       345.96        17.92        46.82 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GJ 
       78.94        24.43        39.25       314.53       135.91        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GS TCGA-EE-A2GT 
       54.71        55.00        90.94       101.95        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME 
       67.13        21.67       129.24        19.76        61.51       103.27 
TCGA-EE-A2MG TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MQ 
      103.17        96.23       144.76       203.01       167.87        43.23 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG 
       53.26         4.24       122.73         3.68        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A1A1 
      138.77        12.59         6.41       131.08        61.05        79.99 
TCGA-FR-A44A TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
      160.60       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85       357.37        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZW 
       32.71        47.38        74.73        11.41       148.77        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       27.06        27.02        77.79        50.14        12.43        49.45 
TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A266 
       22.98        47.54        76.41       120.46       117.93        10.09 
TCGA-GN-A267 TCGA-GN-A26A 
       64.41        32.48 

  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                          0.20                           3.22 
  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                        248.61                         357.37 
  AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE 
                        45.665                         49.150 
[1] "0.2 - 248.6 (45.7)" "3.2 - 357.4 (49.2)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 20(17Q25.3) MUTATED"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 20(17Q25.3) WILD-TYPE" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 20(17Q25.3) MUTATED" "AMP PEAK 20(17Q25.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 20(17Q25.3) WILD-TYPE"   "AMP PEAK 20(17Q25.3) MUTATED" 
[1] "hr=" "1.1"
D20V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 20(17Q25.3) MUTATED                   10             0
  AMP PEAK 20(17Q25.3) WILD-TYPE                 15             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 20(17Q25.3) MUTATED                                                                                         13
  AMP PEAK 20(17Q25.3) WILD-TYPE                                                                                       22
                                vv
clus                             REGIONAL LYMPH NODE
  AMP PEAK 20(17Q25.3) MUTATED                    43
  AMP PEAK 20(17Q25.3) WILD-TYPE                  69
D20V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 20(17Q25.3) MUTATED
  DISTANT METASTASIS                                                                                                 10
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           13
  REGIONAL LYMPH NODE                                                                                                43
                                                                                          clus
vv                                                                                         AMP PEAK 20(17Q25.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   15
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             22
  REGIONAL LYMPH NODE                                                                                                  69
D20V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 20(17Q25.3) MUTATED     21   45
  AMP PEAK 20(17Q25.3) WILD-TYPE   46   61
        clus
vv       AMP PEAK 20(17Q25.3) MUTATED AMP PEAK 20(17Q25.3) WILD-TYPE
  FEMALE                           21                             46
  MALE                             45                             61
                                vv
clus                             M0 M1 M1A M1B M1C
  AMP PEAK 20(17Q25.3) MUTATED   59  1   1   1   0
  AMP PEAK 20(17Q25.3) WILD-TYPE 91  1   1   1   2
D20V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 20(17Q25.3) MUTATED   36  0   3   7  0   3   3   3  8  0
  AMP PEAK 20(17Q25.3) WILD-TYPE 59  2   4   9  1   1   8   2  8  2
D20V6, multiclass
D20V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 20(17Q25.3) MUTATED             1       6        5        3        8
  AMP PEAK 20(17Q25.3) WILD-TYPE           3      11        5       11       11
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 20(17Q25.3) MUTATED           1         3         5         3
  AMP PEAK 20(17Q25.3) WILD-TYPE         7         7         3         6
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 20(17Q25.3) MUTATED            2          8         12        2
  AMP PEAK 20(17Q25.3) WILD-TYPE          4         10         11        4
D20V8, multiclass

Clustering(21) Variable = Amp Peak 21(19p13.2) mutation analysis
D21V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 21(19P13.2) MUTATED   16 18
  AMP PEAK 21(19P13.2) WILD-TYPE 67 69
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                            34                            136 
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                            18                             69 
$`AMP PEAK 21(19P13.2) MUTATED`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A2JF TCGA-D3-A3MV TCGA-DA-A1I0 TCGA-DA-A1IC 
      112.54        71.80        48.76        21.47        20.38        68.09 
TCGA-DA-A3F5 TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A2GH 
      215.44        39.62         2.56        56.42        14.47       182.01 
TCGA-EE-A2GO TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2MG TCGA-EE-A2MM TCGA-EE-A2MR 
      101.95       129.24        28.80       103.17       167.87       103.56 
TCGA-ER-A19J TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YY TCGA-FS-A1Z3 
        6.41        80.32        33.21        80.48       228.59        20.91 
TCGA-FS-A1Z7 TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZS 
        7.76       357.37        53.52        47.38       101.26       148.77 
TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-GN-A266 TCGA-GN-A267 
       50.14         0.20        10.09        64.41 

$`AMP PEAK 21(19P13.2) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2J8 
       16.57       121.22        28.08        31.59        43.40        65.49 
TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CE 
       23.77        11.87        12.10        58.03        71.24        60.23 
TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX 
       24.53         9.30       148.31        49.74         2.70         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 
       11.34         3.22        48.89        36.03       117.17       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
       23.44        28.60        10.49        15.68        29.82         8.65 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
       33.73        14.70        26.86         4.93       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29M 
      168.26        63.32        47.84        13.97        32.19        44.35 
TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       18.58        37.35        55.89       345.96        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
       43.23       314.53       135.91        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       55.00        75.48        90.94        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       19.56        67.13        21.67        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.27        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU 
       47.54       248.61        43.23       136.44        41.59        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19L TCGA-ER-A19M 
       23.47       138.77        12.59        26.37       131.08        61.05 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1Z0 
       44.05        79.99       160.60       216.92        48.59       202.62 
TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       28.08        27.68        48.85        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZT 
       32.71        23.93        74.73       133.55        11.41        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 
       26.56        49.48        27.06        27.02        77.79        12.43 
TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 
       49.45        22.98        47.54        76.41       120.46       117.93 
TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        62.76        32.48        39.58 

  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                           0.2                            2.7 
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                        357.37                         345.96 
  AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE 
                        60.415                         45.585 
[1] "0.2 - 357.4 (60.4)" "2.7 - 346.0 (45.6)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 21(19P13.2) MUTATED"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 21(19P13.2) MUTATED"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 21(19P13.2) MUTATED"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 21(19P13.2) MUTATED"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 21(19P13.2) MUTATED"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 21(19P13.2) MUTATED"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 21(19P13.2) MUTATED"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 21(19P13.2) MUTATED"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 21(19P13.2) MUTATED"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"AMP PEAK 21(19P13.2) WILD-TYPE"   "AMP PEAK 21(19P13.2) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 21(19P13.2) MUTATED" "AMP PEAK 21(19P13.2) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"AMP PEAK 21(19P13.2) WILD-TYPE" "AMP PEAK 21(19P13.2) WILD-TYPE" 
[1] "hr=" "1.3"
D21V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 21(19P13.2) MUTATED                    6             0
  AMP PEAK 21(19P13.2) WILD-TYPE                 19             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 21(19P13.2) MUTATED                                                                                          9
  AMP PEAK 21(19P13.2) WILD-TYPE                                                                                       26
                                vv
clus                             REGIONAL LYMPH NODE
  AMP PEAK 21(19P13.2) MUTATED                    19
  AMP PEAK 21(19P13.2) WILD-TYPE                  93
D21V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 21(19P13.2) MUTATED
  DISTANT METASTASIS                                                                                                  6
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            9
  REGIONAL LYMPH NODE                                                                                                19
                                                                                          clus
vv                                                                                         AMP PEAK 21(19P13.2) WILD-TYPE
  DISTANT METASTASIS                                                                                                   19
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             26
  REGIONAL LYMPH NODE                                                                                                  93
D21V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 21(19P13.2) MUTATED     11   23
  AMP PEAK 21(19P13.2) WILD-TYPE   56   83
        clus
vv       AMP PEAK 21(19P13.2) MUTATED AMP PEAK 21(19P13.2) WILD-TYPE
  FEMALE                           11                             56
  MALE                             23                             83
                                vv
clus                              M0  M1 M1A M1B M1C
  AMP PEAK 21(19P13.2) MUTATED    28   2   2   0   0
  AMP PEAK 21(19P13.2) WILD-TYPE 122   0   0   2   2
D21V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 21(19P13.2) MUTATED   19  0   2   4  0   1   0   2  4  0
  AMP PEAK 21(19P13.2) WILD-TYPE 76  2   5  12  1   3  11   3 12  2
D21V6, multiclass
D21V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 21(19P13.2) MUTATED             2       6        1        1        3
  AMP PEAK 21(19P13.2) WILD-TYPE           2      11        9       13       16
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 21(19P13.2) MUTATED           2         0         2         2
  AMP PEAK 21(19P13.2) WILD-TYPE         6        10         6         7
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 21(19P13.2) MUTATED            2          3          5        3
  AMP PEAK 21(19P13.2) WILD-TYPE          4         15         18        3
D21V8, multiclass

Clustering(22) Variable = Amp Peak 22(20q13.2) mutation analysis
D22V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 22(20Q13.2) MUTATED   45 44
  AMP PEAK 22(20Q13.2) WILD-TYPE 38 43
  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                            89                             81 
  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                            44                             43 
$`AMP PEAK 22(20Q13.2) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A3C6 
       16.57       112.54        31.59        11.87        48.76        58.03 
TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A1JX TCGA-D9-A3Z3 
       71.24        60.23        21.47       148.31         6.38         3.22 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I7 
       48.89        36.03        20.38       194.83       176.55        61.18 
TCGA-DA-A1IA TCGA-DA-A3F5 TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29A 
       65.92       215.44        26.86       109.64       168.26        63.32 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29T 
       13.97        39.62         2.56        56.42        14.47       345.96 
TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GE TCGA-EE-A2GH 
       78.94        39.25        58.75        47.54       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GU 
       22.55        75.48        90.94       101.95        13.87        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MG 
       21.67       129.24        28.80        19.76        61.51       103.17 
TCGA-EE-A2MH TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB 
       16.96       248.61       136.44        41.59        53.26       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG TCGA-ER-A19J TCGA-ER-A19L 
       25.84         3.68        26.73        23.47         6.41       131.08 
TCGA-ER-A19M TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YX TCGA-FS-A1Z0 
       61.05        33.21        80.48       160.60        48.59       202.62 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE 
       28.08         7.76        27.68       357.37        53.52        40.27 
TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-FS-A1ZS 
        9.70        47.38        23.93       101.26       133.55       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-GN-A264 
       53.16        26.56        27.06        50.14         0.20       117.93 
TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        64.41        62.76        32.48        39.58 

$`AMP PEAK 22(20Q13.2) WILD-TYPE`
TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J6 TCGA-D3-A2J8 TCGA-D3-A2J9 
       71.80       121.22        28.08        43.40        65.49        23.77 
TCGA-D3-A2JK TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A3Z1 
       12.10        24.53         9.30        49.74         2.70        11.34 
TCGA-DA-A1HY TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A1IC 
      117.17        35.93       107.34        53.92        23.44        68.09 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 
       28.60        10.49        15.68        29.82         8.65        33.73 
TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29M 
       14.70         4.93        78.87        47.84        32.19        44.35 
TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 
       18.58        37.35        55.89        25.87        17.92        46.82 
TCGA-EE-A2A2 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
       24.43        43.23       314.53        89.33        54.71        55.00 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MI 
       14.30        55.59        19.56        47.28       103.27       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ 
       96.23       144.76       203.01       167.87        47.54        43.23 
TCGA-EE-A2MR TCGA-EE-A3AA TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
      103.56         4.24        13.81       138.77        12.59        26.37 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z3 
       44.05        79.99        80.32       216.92       228.59        20.91 
TCGA-FS-A1ZB TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZW 
       48.85        15.45        32.71        74.73        11.41        49.48 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU 
       27.02        77.79        12.43        49.45        22.98        47.54 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A266 
       76.41       120.46        10.09 

  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                           0.2                            2.7 
  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                        357.37                         314.53 
  AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE 
                         53.16                          44.05 
[1] "0.2 - 357.4 (53.2)" "2.7 - 314.5 (44.0)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"AMP PEAK 22(20Q13.2) WILD-TYPE" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 22(20Q13.2) WILD-TYPE"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 22(20Q13.2) MUTATED" "AMP PEAK 22(20Q13.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 22(20Q13.2) MUTATED"   "AMP PEAK 22(20Q13.2) MUTATED" 
[1] "hr=" "1.3"
D22V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 22(20Q13.2) MUTATED                   16             0
  AMP PEAK 22(20Q13.2) WILD-TYPE                  9             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 22(20Q13.2) MUTATED                                                                                         17
  AMP PEAK 22(20Q13.2) WILD-TYPE                                                                                       18
                                vv
clus                             REGIONAL LYMPH NODE
  AMP PEAK 22(20Q13.2) MUTATED                    57
  AMP PEAK 22(20Q13.2) WILD-TYPE                  55
D22V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 22(20Q13.2) MUTATED
  DISTANT METASTASIS                                                                                                 16
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           17
  REGIONAL LYMPH NODE                                                                                                57
                                                                                          clus
vv                                                                                         AMP PEAK 22(20Q13.2) WILD-TYPE
  DISTANT METASTASIS                                                                                                    9
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             18
  REGIONAL LYMPH NODE                                                                                                  55
D22V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 22(20Q13.2) MUTATED     32   58
  AMP PEAK 22(20Q13.2) WILD-TYPE   35   48
        clus
vv       AMP PEAK 22(20Q13.2) MUTATED AMP PEAK 22(20Q13.2) WILD-TYPE
  FEMALE                           32                             35
  MALE                             58                             48
                                vv
clus                             M0 M1 M1A M1B M1C
  AMP PEAK 22(20Q13.2) MUTATED   77  2   2   1   0
  AMP PEAK 22(20Q13.2) WILD-TYPE 73  0   0   1   2
D22V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 22(20Q13.2) MUTATED   50  1   5  10  0   2   4   2  7  2
  AMP PEAK 22(20Q13.2) WILD-TYPE 45  1   2   6  1   2   7   3  9  0
D22V6, multiclass
D22V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 22(20Q13.2) MUTATED             4      12        7        6        8
  AMP PEAK 22(20Q13.2) WILD-TYPE           0       5        3        8       11
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 22(20Q13.2) MUTATED           2         2         7         4
  AMP PEAK 22(20Q13.2) WILD-TYPE         6         8         1         5
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 22(20Q13.2) MUTATED            4         10         11        3
  AMP PEAK 22(20Q13.2) WILD-TYPE          2          8         12        3
D22V8, multiclass

Clustering(23) Variable = Amp Peak 23(22q13.2) mutation analysis
D23V1, survival
                                sevent
clus2                             0  1
  AMP PEAK 23(22Q13.2) MUTATED   42 36
  AMP PEAK 23(22Q13.2) WILD-TYPE 41 51
  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                            78                             92 
  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                            36                             51 
$`AMP PEAK 23(22Q13.2) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q9 TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3MO TCGA-D3-A3MV 
       16.57        31.59        71.24        60.23         9.30        21.47 
TCGA-D9-A148 TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
      148.31         6.38        11.34        48.89        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       20.38       194.83        61.18        53.92        65.92        23.44 
TCGA-DA-A3F5 TCGA-EE-A17Z TCGA-EE-A20H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
      215.44         8.65       168.26         2.56        44.35        18.58 
TCGA-EE-A29R TCGA-EE-A29X TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       14.47        17.92        24.43        39.25        58.75        47.54 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2M6 
      182.01        22.55        75.48        90.94       101.95       129.24 
TCGA-EE-A2M7 TCGA-EE-A2ME TCGA-EE-A2MJ TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR 
       28.80       103.27        96.23        47.54        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE 
      136.44        53.26         4.24       122.73         3.68        26.73 
TCGA-EE-A3AG TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FR-A44A 
       23.47       131.08        61.05        80.32        80.48       160.60 
TCGA-FS-A1YY TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG 
      228.59         7.76        27.68        53.52        40.27         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-FS-A1ZS TCGA-FS-A1ZT 
       32.71        23.93       101.26       133.55       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-FW-A3TU 
       26.56        49.48        27.06        50.14         0.20        47.54 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
      117.93        84.72        64.41        62.76        32.48        39.58 

$`AMP PEAK 23(22Q13.2) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J6 TCGA-D3-A2J8 
      112.54        71.80       121.22        28.08        43.40        65.49 
TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CF 
       23.77        11.87        48.76        12.10        58.03        24.53 
TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A3Z3 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 
       49.74         2.70         3.22       176.55        35.93       107.34 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A181 
       68.09        28.60        10.49        15.68        29.82        33.73 
TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29A 
       14.70        26.86         4.93       109.64        78.87        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29P TCGA-EE-A29Q 
       47.84        13.97        39.62        32.19        56.42        37.35 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2GC 
       55.89       345.96        25.87        46.82        78.94        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GP 
      314.53       135.91        89.33        54.71        55.00        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M8 
       14.30        55.59        19.56        67.13        21.67        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK 
       61.51        47.28       103.17        16.96       204.62       144.76 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MP TCGA-EE-A2MT TCGA-EE-A3AC TCGA-EE-A3AF 
      203.01       167.87       248.61        41.59        25.84        13.81 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19N TCGA-ER-A1A1 
      138.77        12.59        26.37         6.41        44.05        79.99 
TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
       33.21       216.92        48.59       202.62        20.91        28.08 
TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZF TCGA-FS-A1ZJ TCGA-FS-A1ZP TCGA-FS-A1ZR 
       48.85       357.37        15.45        47.38        74.73        11.41 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 
       27.02        77.79        12.43        49.45        22.98        76.41 
TCGA-GN-A262 TCGA-GN-A266 
      120.46        10.09 

  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                           0.2                            2.7 
  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                        228.59                         357.37 
  AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE 
                        49.185                         47.050 
[1] "0.2 - 228.6 (49.2)" "2.7 - 357.4 (47.0)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"AMP PEAK 23(22Q13.2) WILD-TYPE" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"AMP PEAK 23(22Q13.2) WILD-TYPE"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
  "AMP PEAK 23(22Q13.2) MUTATED" "AMP PEAK 23(22Q13.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "AMP PEAK 23(22Q13.2) MUTATED"   "AMP PEAK 23(22Q13.2) MUTATED" 
[1] "hr=" "1.2"
D23V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 23(22Q13.2) MUTATED                   14             1
  AMP PEAK 23(22Q13.2) WILD-TYPE                 11             0
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 23(22Q13.2) MUTATED                                                                                         16
  AMP PEAK 23(22Q13.2) WILD-TYPE                                                                                       19
                                vv
clus                             REGIONAL LYMPH NODE
  AMP PEAK 23(22Q13.2) MUTATED                    48
  AMP PEAK 23(22Q13.2) WILD-TYPE                  64
D23V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 23(22Q13.2) MUTATED
  DISTANT METASTASIS                                                                                                 14
  PRIMARY TUMOR                                                                                                       1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           16
  REGIONAL LYMPH NODE                                                                                                48
                                                                                          clus
vv                                                                                         AMP PEAK 23(22Q13.2) WILD-TYPE
  DISTANT METASTASIS                                                                                                   11
  PRIMARY TUMOR                                                                                                         0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             19
  REGIONAL LYMPH NODE                                                                                                  64
D23V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  AMP PEAK 23(22Q13.2) MUTATED     31   48
  AMP PEAK 23(22Q13.2) WILD-TYPE   36   58
        clus
vv       AMP PEAK 23(22Q13.2) MUTATED AMP PEAK 23(22Q13.2) WILD-TYPE
  FEMALE                           31                             36
  MALE                             48                             58
                                vv
clus                             M0 M1 M1A M1B M1C
  AMP PEAK 23(22Q13.2) MUTATED   66  1   1   1   1
  AMP PEAK 23(22Q13.2) WILD-TYPE 84  1   1   1   1
D23V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 23(22Q13.2) MUTATED   38  0   5   7  0   3   4   4  9  1
  AMP PEAK 23(22Q13.2) WILD-TYPE 57  2   2   9  1   1   7   1  7  1
D23V6, multiclass
D23V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 23(22Q13.2) MUTATED             2       6        4        5        7
  AMP PEAK 23(22Q13.2) WILD-TYPE           2      11        6        9       12
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 23(22Q13.2) MUTATED           3         3         6         4
  AMP PEAK 23(22Q13.2) WILD-TYPE         5         7         2         5
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 23(22Q13.2) MUTATED            5          9         12        2
  AMP PEAK 23(22Q13.2) WILD-TYPE          1          9         11        4
D23V8, multiclass

Clustering(24) Variable = Amp Peak 24(Xq28) mutation analysis
D24V1, survival
                             sevent
clus2                          0  1
  AMP PEAK 24(XQ28) MUTATED   14 15
  AMP PEAK 24(XQ28) WILD-TYPE 69 72
  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                         29                         141 
  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                         15                          72 
$`AMP PEAK 24(XQ28) MUTATED`
TCGA-D3-A2JF TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3MV TCGA-DA-A1I0 TCGA-DA-A3F3 
       48.76        71.24        60.23        21.47        20.38        10.49 
TCGA-DA-A3F5 TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A2GH 
      215.44        63.32        13.97        14.47       345.96       182.01 
TCGA-EE-A2GN TCGA-EE-A3AE TCGA-ER-A19M TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FS-A1ZA 
       90.94        26.73        61.05        80.32        80.48        27.68 
TCGA-FS-A1ZD TCGA-FS-A1ZG TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZU TCGA-FS-A1ZZ 
       53.52         9.70        23.93        74.73        26.56        27.02 
TCGA-FS-A4F0 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A268 TCGA-GN-A26D 
       77.79       120.46       117.93        62.76        39.58 

$`AMP PEAK 24(XQ28) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 
       16.57       112.54        71.80       121.22        28.08        31.59 
TCGA-D3-A2J6 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 
       43.40        65.49        23.77        11.87        12.10        58.03 
TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX 
       24.53         9.30       148.31        49.74         2.70         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 
       11.34         3.22        48.89        36.03       117.17       194.83 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      176.55        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
       23.44        68.09        28.60        15.68        29.82         8.65 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F 
       33.73        14.70        26.86         4.93       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
      168.26        47.84        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X 
       18.58        56.42        37.35        55.89        25.87        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       46.82        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
       43.23       314.53       135.91        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       55.00        75.48       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       19.56        67.13        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       61.51        47.28       103.27       103.17        16.96       204.62 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
       96.23       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       43.23       103.56       136.44        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
      122.73        25.84         3.68        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 
       12.59        26.37         6.41       131.08        44.05        79.99 
TCGA-ER-A3PL TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       33.21       160.60       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZE 
       20.91        28.08         7.76        48.85       357.37        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-FS-A1ZR 
       15.45        32.71        47.38       101.26       133.55        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A4F2 TCGA-FS-A4F9 
      148.77        53.16        49.48        27.06        50.14        12.43 
TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A265 
       49.45         0.20        22.98        47.54        76.41        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A 
       10.09        64.41        32.48 

  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                        9.7                         0.2 
  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                     345.96                      357.37 
  AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE 
                      60.23                       47.38 
[1] "9.7 - 346.0 (60.2)" "0.2 - 357.4 (47.4)"
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "AMP PEAK 24(XQ28) MUTATED"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
  "AMP PEAK 24(XQ28) MUTATED"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "AMP PEAK 24(XQ28) MUTATED"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
  "AMP PEAK 24(XQ28) MUTATED"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "AMP PEAK 24(XQ28) MUTATED"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "AMP PEAK 24(XQ28) MUTATED" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
  "AMP PEAK 24(XQ28) MUTATED"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"AMP PEAK 24(XQ28) WILD-TYPE" "AMP PEAK 24(XQ28) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"AMP PEAK 24(XQ28) WILD-TYPE"   "AMP PEAK 24(XQ28) MUTATED" 
[1] "hr=" "1.1"
D24V2, continuous
                             vv
clus                          DISTANT METASTASIS PRIMARY TUMOR
  AMP PEAK 24(XQ28) MUTATED                    6             0
  AMP PEAK 24(XQ28) WILD-TYPE                 19             1
                             vv
clus                          REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  AMP PEAK 24(XQ28) MUTATED                                                                                          7
  AMP PEAK 24(XQ28) WILD-TYPE                                                                                       28
                             vv
clus                          REGIONAL LYMPH NODE
  AMP PEAK 24(XQ28) MUTATED                    17
  AMP PEAK 24(XQ28) WILD-TYPE                  95
D24V3, multiclass
                                                                                          clus
vv                                                                                         AMP PEAK 24(XQ28) MUTATED
  DISTANT METASTASIS                                                                                               6
  PRIMARY TUMOR                                                                                                    0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                         7
  REGIONAL LYMPH NODE                                                                                             17
                                                                                          clus
vv                                                                                         AMP PEAK 24(XQ28) WILD-TYPE
  DISTANT METASTASIS                                                                                                19
  PRIMARY TUMOR                                                                                                      1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          28
  REGIONAL LYMPH NODE                                                                                               95
D24V4, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  AMP PEAK 24(XQ28) MUTATED     16   14
  AMP PEAK 24(XQ28) WILD-TYPE   51   92
        clus
vv       AMP PEAK 24(XQ28) MUTATED AMP PEAK 24(XQ28) WILD-TYPE
  FEMALE                        16                          51
  MALE                          14                          92
                             vv
clus                           M0  M1 M1A M1B M1C
  AMP PEAK 24(XQ28) MUTATED    26   0   1   0   0
  AMP PEAK 24(XQ28) WILD-TYPE 124   2   1   2   2
D24V5, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  AMP PEAK 24(XQ28) MUTATED   15  0   2   3  0   1   3   1  2  1
  AMP PEAK 24(XQ28) WILD-TYPE 80  2   5  13  1   3   8   4 14  1
D24V6, multiclass
D24V7, continuous
                             vv
clus                          I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  AMP PEAK 24(XQ28) MUTATED             0       1        2        2        2
  AMP PEAK 24(XQ28) WILD-TYPE           4      16        8       12       17
                             vv
clus                          STAGE IIA STAGE IIB STAGE IIC STAGE III
  AMP PEAK 24(XQ28) MUTATED           2         3         3         2
  AMP PEAK 24(XQ28) WILD-TYPE         6         7         5         7
                             vv
clus                          STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  AMP PEAK 24(XQ28) MUTATED            2          3          5        0
  AMP PEAK 24(XQ28) WILD-TYPE          4         15         18        6
D24V8, multiclass

Clustering(25) Variable = Del Peak  1(1p36.31) mutation analysis
D25V1, survival
                                sevent
clus2                             0  1
  DEL PEAK  1(1P36.31) MUTATED   23 21
  DEL PEAK  1(1P36.31) WILD-TYPE 60 66
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                            44                            126 
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                            21                             66 
$`DEL PEAK  1(1P36.31) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CE TCGA-D3-A3MV TCGA-D9-A1JX 
       16.57        12.10        58.03        60.23        21.47         6.38 
TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I7 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A182 
       20.38       176.55        61.18       215.44        15.68        14.70 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A29R TCGA-EE-A2GE TCGA-EE-A2GI 
       78.87       168.26        13.97        14.47       135.91        22.55 
TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2M5 TCGA-EE-A2MD TCGA-EE-A2MH TCGA-EE-A2MK 
      101.95        14.30        21.67        47.28        16.96       144.76 
TCGA-EE-A2MS TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AF TCGA-ER-A19D TCGA-ER-A3PL 
      136.44       122.73         3.68        13.81        12.59        33.21 
TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z7 TCGA-FS-A1ZJ 
      216.92        48.59       228.59       202.62         7.76        47.38 
TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A4F0 TCGA-FS-A4FC TCGA-FW-A3I3 
       53.16        49.48        27.06        77.79        49.45         0.20 
TCGA-FW-A3TU TCGA-GN-A26D 
       47.54        39.58 

$`DEL PEAK  1(1P36.31) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J6 
      112.54        71.80       121.22        28.08        31.59        43.40 
TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A3CC TCGA-D3-A3CF 
       65.49        23.77        11.87        48.76        71.24        24.53 
TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A3Z1 TCGA-D9-A3Z3 
        9.30       148.31        49.74         2.70        11.34         3.22 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I5 
       48.89        36.03       117.17       194.83        35.93       107.34 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82         8.65        33.73        26.86         4.93       109.64 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       63.32        47.84        39.62        32.19         2.56        44.35 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       18.58        56.42        37.35        55.89       345.96        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK 
       47.54        43.23       314.53       182.01        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT 
       55.00        75.48        90.94        13.87        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME 
       67.13       129.24        28.80        19.76        61.51       103.27 
TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      103.17       204.62        96.23       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       103.56        41.59        53.26         4.24 
TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J 
       25.84        26.73        23.47       138.77        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN 
      131.08        61.05        44.05        79.99        80.32        80.48 
TCGA-FR-A44A TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC 
      160.60        20.91        28.08        27.68        48.85       357.37 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK 
       53.52        40.27        15.45         9.70        32.71        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU 
      101.26        74.73       133.55        11.41       148.77        26.56 
TCGA-FS-A1ZZ TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 
       27.02        50.14        12.43        22.98        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
      117.93        84.72        10.09        64.41        62.76        32.48 

  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                          0.20                           2.56 
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                        228.59                         357.37 
  DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE 
                         47.33                          48.30 
[1] "0.2 - 228.6 (47.3)" "2.6 - 357.4 (48.3)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK  1(1P36.31) MUTATED"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK  1(1P36.31) MUTATED" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK  1(1P36.31) WILD-TYPE" "DEL PEAK  1(1P36.31) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK  1(1P36.31) WILD-TYPE"   "DEL PEAK  1(1P36.31) MUTATED" 
[1] "hr=" "1.1"
D25V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK  1(1P36.31) MUTATED                    9             0
  DEL PEAK  1(1P36.31) WILD-TYPE                 16             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK  1(1P36.31) MUTATED                                                                                         10
  DEL PEAK  1(1P36.31) WILD-TYPE                                                                                       25
                                vv
clus                             REGIONAL LYMPH NODE
  DEL PEAK  1(1P36.31) MUTATED                    27
  DEL PEAK  1(1P36.31) WILD-TYPE                  85
D25V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK  1(1P36.31) MUTATED
  DISTANT METASTASIS                                                                                                  9
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           10
  REGIONAL LYMPH NODE                                                                                                27
                                                                                          clus
vv                                                                                         DEL PEAK  1(1P36.31) WILD-TYPE
  DISTANT METASTASIS                                                                                                   16
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             25
  REGIONAL LYMPH NODE                                                                                                  85
D25V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK  1(1P36.31) MUTATED     22   24
  DEL PEAK  1(1P36.31) WILD-TYPE   45   82
        clus
vv       DEL PEAK  1(1P36.31) MUTATED DEL PEAK  1(1P36.31) WILD-TYPE
  FEMALE                           22                             45
  MALE                             24                             82
                                vv
clus                              M0  M1 M1A M1B M1C
  DEL PEAK  1(1P36.31) MUTATED    38   1   2   0   0
  DEL PEAK  1(1P36.31) WILD-TYPE 112   1   0   2   2
D25V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  1(1P36.31) MUTATED   25  0   1   6  0   1   5   0  3  1
  DEL PEAK  1(1P36.31) WILD-TYPE 70  2   6  10  1   3   6   5 13  1
D25V6, multiclass
D25V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK  1(1P36.31) MUTATED             1       5        2        3        7
  DEL PEAK  1(1P36.31) WILD-TYPE           3      12        8       11       12
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK  1(1P36.31) MUTATED           2         2         1         3
  DEL PEAK  1(1P36.31) WILD-TYPE         6         8         7         6
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  1(1P36.31) MUTATED            0          4          9        2
  DEL PEAK  1(1P36.31) WILD-TYPE          6         14         14        4
D25V8, multiclass

Clustering(26) Variable = Del Peak  2(1p22.1) mutation analysis
D26V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  2(1P22.1) MUTATED   25 20
  DEL PEAK  2(1P22.1) WILD-TYPE 58 67
  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                           45                           125 
  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                           20                            67 
$`DEL PEAK  2(1P22.1) MUTATED`
TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2JD TCGA-D3-A3CC TCGA-D3-A3CE 
       28.08        31.59        43.40        11.87        71.24        60.23 
TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A3Z3 TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I7 
        9.30        21.47         3.22        20.38       176.55        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A20B TCGA-EE-A20H 
       53.92        65.92       215.44        15.68       109.64       168.26 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A2GC TCGA-EE-A2GE 
       47.84        13.97        14.47       345.96        43.23       135.91 
TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2MK TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A3AB 
      101.95        14.30       144.76       248.61       136.44       122.73 
TCGA-EE-A3AD TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A3PL 
        3.68       138.77        12.59       131.08        61.05        33.21 
TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z7 TCGA-FS-A1ZJ TCGA-FS-A1ZS TCGA-FS-A1ZT 
       48.59       202.62         7.76        47.38       148.77        53.16 
TCGA-FS-A1ZW TCGA-GN-A262 TCGA-GN-A26D 
       49.48       120.46        39.58 

$`DEL PEAK  2(1P22.1) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A2J8 TCGA-D3-A2J9 
       16.57       112.54        71.80       121.22        65.49        23.77 
TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CF TCGA-D9-A148 TCGA-D9-A149 
       48.76        12.10        58.03        24.53       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY 
        2.70         6.38        11.34        48.89        36.03       117.17 
TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
      194.83        35.93       107.34        23.44        68.09        28.60 
TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       10.49        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
        4.93        78.87        63.32        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29V 
       44.35        18.58        56.42        37.35        55.89        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 
       17.92        46.82        78.94        24.43        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
       47.54       314.53       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT 
       55.00        75.48        90.94        13.87        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       67.13        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       47.28       103.27       103.17        16.96       204.62        96.23 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT 
      203.01       167.87        47.54        43.23       103.56        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
       53.26         4.24        25.84        26.73        13.81        23.47 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN 
       26.37         6.41        44.05        79.99        80.32        80.48 
TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1ZA 
      160.60       216.92       228.59        20.91        28.08        27.68 
TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       48.85       357.37        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR 
       32.71        23.93       101.26        74.73       133.55        11.41 
TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 
       26.56        27.06        27.02        77.79        50.14        12.43 
TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A264 
       49.45         0.20        22.98        47.54        76.41       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
       84.72        10.09        64.41        62.76        32.48 

  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                         3.22                          0.20 
  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                       345.96                        357.37 
  DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE 
                        53.16                         46.82 
[1] "3.2 - 346.0 (53.2)" "0.2 - 357.4 (46.8)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
  "DEL PEAK  2(1P22.1) MUTATED"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  2(1P22.1) MUTATED" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  2(1P22.1) WILD-TYPE" "DEL PEAK  2(1P22.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  2(1P22.1) WILD-TYPE"   "DEL PEAK  2(1P22.1) MUTATED" 
[1] "hr=" "1.5"
D26V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK  2(1P22.1) MUTATED                    4             0
  DEL PEAK  2(1P22.1) WILD-TYPE                 21             1
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK  2(1P22.1) MUTATED                                                                                         13
  DEL PEAK  2(1P22.1) WILD-TYPE                                                                                       22
                               vv
clus                            REGIONAL LYMPH NODE
  DEL PEAK  2(1P22.1) MUTATED                    29
  DEL PEAK  2(1P22.1) WILD-TYPE                  83
D26V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK  2(1P22.1) MUTATED
  DISTANT METASTASIS                                                                                                 4
  PRIMARY TUMOR                                                                                                      0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          13
  REGIONAL LYMPH NODE                                                                                               29
                                                                                          clus
vv                                                                                         DEL PEAK  2(1P22.1) WILD-TYPE
  DISTANT METASTASIS                                                                                                  21
  PRIMARY TUMOR                                                                                                        1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            22
  REGIONAL LYMPH NODE                                                                                                 83
D26V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  2(1P22.1) MUTATED     18   28
  DEL PEAK  2(1P22.1) WILD-TYPE   49   78
        clus
vv       DEL PEAK  2(1P22.1) MUTATED DEL PEAK  2(1P22.1) WILD-TYPE
  FEMALE                          18                            49
  MALE                            28                            78
                               vv
clus                             M0  M1 M1A M1B M1C
  DEL PEAK  2(1P22.1) MUTATED    38   0   2   1   0
  DEL PEAK  2(1P22.1) WILD-TYPE 112   2   0   1   2
D26V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  2(1P22.1) MUTATED   21  0   1   8  0   2   4   1  4  1
  DEL PEAK  2(1P22.1) WILD-TYPE 74  2   6   8  1   2   7   4 12  1
D26V6, multiclass
D26V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK  2(1P22.1) MUTATED             0       5        1        3        7
  DEL PEAK  2(1P22.1) WILD-TYPE           4      12        9       11       12
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK  2(1P22.1) MUTATED           0         2         2         4
  DEL PEAK  2(1P22.1) WILD-TYPE         8         8         6         5
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  2(1P22.1) MUTATED            0          7          8        2
  DEL PEAK  2(1P22.1) WILD-TYPE          6         11         15        4
D26V8, multiclass

Clustering(27) Variable = Del Peak  3(2q37.3) mutation analysis
D27V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  3(2Q37.3) MUTATED   23 21
  DEL PEAK  3(2Q37.3) WILD-TYPE 60 66
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                           44                           126 
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                           21                            66 
$`DEL PEAK  3(2Q37.3) MUTATED`
TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D9-A148 TCGA-D9-A149 TCGA-DA-A1I0 
       11.87        12.10        58.03       148.31        49.74        20.38 
TCGA-DA-A1IA TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29D 
       65.92       109.64        78.87       168.26        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GR 
       39.62        56.42        37.35        58.75        43.23        14.30 
TCGA-EE-A2M7 TCGA-EE-A2MH TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MS TCGA-EE-A3AF 
       28.80        16.96        96.23       144.76       136.44        13.81 
TCGA-EE-A3AG TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX 
       23.47        80.32        33.21       160.60       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-FS-A1ZZ 
      228.59       202.62        47.38       101.26       133.55        27.02 
TCGA-FS-A4F0 TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A266 
       77.79         0.20        47.54       120.46       117.93        10.09 
TCGA-GN-A267 TCGA-GN-A26D 
       64.41        39.58 

$`DEL PEAK  3(2Q37.3) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 
       16.57       112.54        71.80       121.22        28.08        31.59 
TCGA-D3-A2J6 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JF TCGA-D3-A3CC TCGA-D3-A3CE 
       43.40        65.49        23.77        48.76        71.24        60.23 
TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 
       24.53         9.30        21.47         2.70         6.38        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I2 
        3.22        48.89        36.03       117.17       194.83       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A1IC 
       35.93       107.34        61.18        53.92        23.44        68.09 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
       28.60        10.49       215.44        15.68        29.82         8.65 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A29A TCGA-EE-A29H 
       33.73        14.70        26.86         4.93        63.32        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
        2.56        44.35        18.58        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 
       25.87        17.92        46.82        78.94        24.43        39.25 
TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ 
       47.54       314.53       135.91       182.01        22.55        89.33 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       54.71        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M8 
       55.59        19.56        67.13        21.67       129.24        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A2ML 
       61.51        47.28       103.27       103.17       204.62       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT 
      167.87        47.54       248.61        43.23       103.56        41.59 
TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE 
       53.26         4.24       122.73        25.84         3.68        26.73 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M 
      138.77        12.59        26.37         6.41       131.08        61.05 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FR-A3YN TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
       44.05        79.99        80.48        20.91        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF 
       27.68        48.85       357.37        53.52        40.27        15.45 
TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS 
        9.70        32.71        23.93        74.73        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A4F2 TCGA-FS-A4F9 
       53.16        26.56        49.48        27.06        50.14        12.43 
TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26A 
       49.45        22.98        76.41        84.72        62.76        32.48 

  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                         0.20                          2.56 
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                       228.59                        357.37 
  DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE 
                       53.080                        45.585 
[1] "0.2 - 228.6 (53.1)" "2.6 - 357.4 (45.6)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  3(2Q37.3) WILD-TYPE" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  3(2Q37.3) MUTATED"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  3(2Q37.3) MUTATED" "DEL PEAK  3(2Q37.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  3(2Q37.3) WILD-TYPE"   "DEL PEAK  3(2Q37.3) MUTATED" 
[1] "hr=" "1.3"
D27V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK  3(2Q37.3) MUTATED                    8             0
  DEL PEAK  3(2Q37.3) WILD-TYPE                 17             1
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK  3(2Q37.3) MUTATED                                                                                         13
  DEL PEAK  3(2Q37.3) WILD-TYPE                                                                                       22
                               vv
clus                            REGIONAL LYMPH NODE
  DEL PEAK  3(2Q37.3) MUTATED                    23
  DEL PEAK  3(2Q37.3) WILD-TYPE                  89
D27V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK  3(2Q37.3) MUTATED
  DISTANT METASTASIS                                                                                                 8
  PRIMARY TUMOR                                                                                                      0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          13
  REGIONAL LYMPH NODE                                                                                               23
                                                                                          clus
vv                                                                                         DEL PEAK  3(2Q37.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                  17
  PRIMARY TUMOR                                                                                                        1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            22
  REGIONAL LYMPH NODE                                                                                                 89
D27V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  3(2Q37.3) MUTATED     20   24
  DEL PEAK  3(2Q37.3) WILD-TYPE   47   82
        clus
vv       DEL PEAK  3(2Q37.3) MUTATED DEL PEAK  3(2Q37.3) WILD-TYPE
  FEMALE                          20                            47
  MALE                            24                            82
                               vv
clus                             M0  M1 M1A M1B M1C
  DEL PEAK  3(2Q37.3) MUTATED    33   1   2   1   0
  DEL PEAK  3(2Q37.3) WILD-TYPE 117   1   0   1   2
D27V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  3(2Q37.3) MUTATED   27  0   2   5  0   0   1   1  2  0
  DEL PEAK  3(2Q37.3) WILD-TYPE 68  2   5  11  1   4  10   4 14  2
D27V6, multiclass
D27V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK  3(2Q37.3) MUTATED             1       3        2        3        9
  DEL PEAK  3(2Q37.3) WILD-TYPE           3      14        8       11       10
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK  3(2Q37.3) MUTATED           1         4         2         1
  DEL PEAK  3(2Q37.3) WILD-TYPE         7         6         6         8
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  3(2Q37.3) MUTATED            2          2          4        2
  DEL PEAK  3(2Q37.3) WILD-TYPE          4         16         19        4
D27V8, multiclass

Clustering(28) Variable = Del Peak  4(3q23) mutation analysis
D28V1, survival
                             sevent
clus2                          0  1
  DEL PEAK  4(3Q23) MUTATED   13 11
  DEL PEAK  4(3Q23) WILD-TYPE 70 76
  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                         24                         146 
  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                         11                          76 
$`DEL PEAK  4(3Q23) MUTATED`
TCGA-D3-A1Q5 TCGA-D3-A1Q7 TCGA-DA-A1I2 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-EE-A29H 
      112.54       121.22       176.55       107.34        61.18        32.19 
TCGA-EE-A29P TCGA-EE-A29X TCGA-EE-A2GC TCGA-EE-A2GJ TCGA-EE-A2GN TCGA-EE-A2M8 
       56.42        17.92        43.23        89.33        90.94        19.76 
TCGA-EE-A2MR TCGA-ER-A19F TCGA-ER-A19J TCGA-FS-A1YX TCGA-FS-A1ZJ TCGA-FS-A1ZM 
      103.56        26.37         6.41        48.59        47.38       101.26 
TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A267 TCGA-GN-A268 
        0.20        47.54       120.46       117.93        64.41        62.76 

$`DEL PEAK  4(3Q23) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q6 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2J8 
       16.57        71.80        28.08        31.59        43.40        65.49 
TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC 
       23.77        11.87        48.76        12.10        58.03        71.24 
TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
       60.23        24.53         9.30        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW 
        2.70         6.38        11.34         3.22        48.89        36.03 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I8 TCGA-DA-A1IA 
      117.17        20.38       194.83        35.93        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       29.82         8.65        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29Q TCGA-EE-A29R 
       39.62         2.56        44.35        18.58        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
       55.89       345.96        25.87        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       39.25        58.75        47.54       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2GP 
       22.55        54.71        55.00        75.48       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       14.30        55.59        19.56        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       28.80        61.51        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN 
      204.62        96.23       144.76       203.01       167.87        47.54 
TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
      248.61        43.23       136.44        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
      122.73        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 
      138.77        12.59       131.08        61.05        44.05        79.99 
TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YY 
       80.32        33.21        80.48       160.60       216.92       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      202.62        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH 
      357.37        53.52        40.27        15.45         9.70        32.71 
TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT 
       23.93        74.73       133.55        11.41       148.77        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 
       26.56        49.48        27.06        27.02        77.79        50.14 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A265 TCGA-GN-A266 
       12.43        49.45        22.98        76.41        84.72        10.09 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                       0.20                        2.56 
  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                     176.55                      357.37 
  DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE 
                     61.970                      45.585 
[1] "0.2 - 176.6 (62.0)" "2.6 - 357.4 (45.6)"
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A182                  TCGA-EE-A183 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
"DEL PEAK  4(3Q23) WILD-TYPE"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK  4(3Q23) MUTATED" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "DEL PEAK  4(3Q23) MUTATED"   "DEL PEAK  4(3Q23) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
"DEL PEAK  4(3Q23) WILD-TYPE" "DEL PEAK  4(3Q23) WILD-TYPE" 
[1] "hr=" "1.2"
D28V2, continuous
                             vv
clus                          DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK  4(3Q23) MUTATED                    3             0
  DEL PEAK  4(3Q23) WILD-TYPE                 22             1
                             vv
clus                          REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK  4(3Q23) MUTATED                                                                                          5
  DEL PEAK  4(3Q23) WILD-TYPE                                                                                       30
                             vv
clus                          REGIONAL LYMPH NODE
  DEL PEAK  4(3Q23) MUTATED                    16
  DEL PEAK  4(3Q23) WILD-TYPE                  96
D28V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK  4(3Q23) MUTATED
  DISTANT METASTASIS                                                                                               3
  PRIMARY TUMOR                                                                                                    0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                         5
  REGIONAL LYMPH NODE                                                                                             16
                                                                                          clus
vv                                                                                         DEL PEAK  4(3Q23) WILD-TYPE
  DISTANT METASTASIS                                                                                                22
  PRIMARY TUMOR                                                                                                      1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          30
  REGIONAL LYMPH NODE                                                                                               96
D28V4, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  4(3Q23) MUTATED     12   12
  DEL PEAK  4(3Q23) WILD-TYPE   55   94
        clus
vv       DEL PEAK  4(3Q23) MUTATED DEL PEAK  4(3Q23) WILD-TYPE
  FEMALE                        12                          55
  MALE                          12                          94
                             vv
clus                           M0  M1 M1A M1B M1C
  DEL PEAK  4(3Q23) MUTATED    18   2   0   0   1
  DEL PEAK  4(3Q23) WILD-TYPE 132   0   2   2   1
D28V5, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  4(3Q23) MUTATED   15  1   1   0  0   0   2   1  1  0
  DEL PEAK  4(3Q23) WILD-TYPE 80  1   6  16  1   4   9   4 15  2
D28V6, multiclass
D28V7, continuous
                             vv
clus                          I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK  4(3Q23) MUTATED             1       3        2        2        0
  DEL PEAK  4(3Q23) WILD-TYPE           3      14        8       12       19
                             vv
clus                          STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK  4(3Q23) MUTATED           1         2         1         2
  DEL PEAK  4(3Q23) WILD-TYPE         7         8         7         7
                             vv
clus                          STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  4(3Q23) MUTATED            1          1          1        3
  DEL PEAK  4(3Q23) WILD-TYPE          5         17         22        3
D28V8, multiclass

Clustering(29) Variable = Del Peak  5(4q22.1) mutation analysis
D29V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  5(4Q22.1) MUTATED   19 16
  DEL PEAK  5(4Q22.1) WILD-TYPE 64 71
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                           35                           135 
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                           16                            71 
$`DEL PEAK  5(4Q22.1) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A3CC TCGA-D3-A3MV 
       16.57        28.08        31.59        43.40        71.24        21.47 
TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A3F5 TCGA-DA-A3F8 
      148.31        49.74         3.22        36.03       215.44        15.68 
TCGA-EE-A20B TCGA-EE-A29C TCGA-EE-A29M TCGA-EE-A29T TCGA-EE-A2A5 TCGA-EE-A2GI 
      109.64        47.84        44.35       345.96        39.25        22.55 
TCGA-EE-A2GM TCGA-EE-A2GO TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2MM TCGA-EE-A2MQ 
       75.48       101.95        21.67       129.24       167.87        43.23 
TCGA-EE-A2MS TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19L TCGA-FS-A1Z0 TCGA-FS-A1Z4 
      136.44        23.47        12.59       131.08       202.62        28.08 
TCGA-FS-A1ZA TCGA-FS-A4F2 TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A266 
       27.68        50.14        47.54       120.46        10.09 

$`DEL PEAK  5(4Q22.1) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD 
      112.54        71.80       121.22        65.49        23.77        11.87 
TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D3-A3MO 
       48.76        12.10        58.03        60.23        24.53         9.30 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 
        2.70         6.38        11.34        48.89       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
      194.83       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17X 
       65.92        23.44        68.09        28.60        10.49        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F 
        8.65        33.73        14.70        26.86         4.93        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
      168.26        63.32        13.97        39.62        32.19         2.56 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V 
       18.58        56.42        37.35        14.47        55.89        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB 
       17.92        46.82        78.94        24.43        58.75        47.54 
TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK 
       43.23       314.53       135.91       182.01        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       55.00        90.94        13.87        14.30        55.59        19.56 
TCGA-EE-A2GU TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
       67.13        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
      103.17        16.96       204.62        96.23       144.76       203.01 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       47.54       248.61       103.56        41.59        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AH 
      122.73        25.84         3.68        26.73        13.81       138.77 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41        61.05        44.05        79.99        80.32 
TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       33.21        80.48       160.60       216.92        48.59       228.59 
TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE 
       20.91         7.76        48.85       357.37        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       15.45         9.70        32.71        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU 
       74.73       133.55        11.41       148.77        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC 
       49.48        27.06        27.02        77.79        12.43        49.45 
TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 
        0.20        22.98        76.41       117.93        84.72        64.41 
TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       62.76        32.48        39.58 

  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                         3.22                          0.20 
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                       345.96                        357.37 
  DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE 
                        44.35                         48.59 
[1] "3.2 - 346.0 (44.4)" "0.2 - 357.4 (48.6)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  5(4Q22.1) MUTATED"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  5(4Q22.1) MUTATED" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  5(4Q22.1) WILD-TYPE"   "DEL PEAK  5(4Q22.1) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  5(4Q22.1) WILD-TYPE" "DEL PEAK  5(4Q22.1) WILD-TYPE" 
[1] "hr=" "1.2"
D29V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK  5(4Q22.1) MUTATED                    4             1
  DEL PEAK  5(4Q22.1) WILD-TYPE                 21             0
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK  5(4Q22.1) MUTATED                                                                                         11
  DEL PEAK  5(4Q22.1) WILD-TYPE                                                                                       24
                               vv
clus                            REGIONAL LYMPH NODE
  DEL PEAK  5(4Q22.1) MUTATED                    19
  DEL PEAK  5(4Q22.1) WILD-TYPE                  93
D29V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK  5(4Q22.1) MUTATED
  DISTANT METASTASIS                                                                                                 4
  PRIMARY TUMOR                                                                                                      1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          11
  REGIONAL LYMPH NODE                                                                                               19
                                                                                          clus
vv                                                                                         DEL PEAK  5(4Q22.1) WILD-TYPE
  DISTANT METASTASIS                                                                                                  21
  PRIMARY TUMOR                                                                                                        0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            24
  REGIONAL LYMPH NODE                                                                                                 93
D29V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  5(4Q22.1) MUTATED     18   17
  DEL PEAK  5(4Q22.1) WILD-TYPE   49   89
        clus
vv       DEL PEAK  5(4Q22.1) MUTATED DEL PEAK  5(4Q22.1) WILD-TYPE
  FEMALE                          18                            49
  MALE                            17                            89
                               vv
clus                             M0  M1 M1A M1B M1C
  DEL PEAK  5(4Q22.1) MUTATED    28   0   0   2   0
  DEL PEAK  5(4Q22.1) WILD-TYPE 122   2   2   0   2
D29V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  5(4Q22.1) MUTATED   17  0   0   3  0   3   1   1  4  1
  DEL PEAK  5(4Q22.1) WILD-TYPE 78  2   7  13  1   1  10   4 12  1
D29V6, multiclass
D29V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK  5(4Q22.1) MUTATED             0       4        2        4        3
  DEL PEAK  5(4Q22.1) WILD-TYPE           4      13        8       10       16
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK  5(4Q22.1) MUTATED           0         1         3         0
  DEL PEAK  5(4Q22.1) WILD-TYPE         8         9         5         9
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  5(4Q22.1) MUTATED            1          6          2        1
  DEL PEAK  5(4Q22.1) WILD-TYPE          5         12         21        5
D29V8, multiclass

Clustering(30) Variable = Del Peak  6(4q34.3) mutation analysis
D30V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  6(4Q34.3) MUTATED   24 20
  DEL PEAK  6(4Q34.3) WILD-TYPE 59 67
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                           44                           126 
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                           20                            67 
$`DEL PEAK  6(4Q34.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q8 TCGA-D3-A2JD TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A148 
       16.57        28.08        11.87        71.24        21.47       148.31 
TCGA-D9-A149 TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I7 TCGA-DA-A3F5 TCGA-DA-A3F8 
       49.74        36.03       117.17        61.18       215.44        15.68 
TCGA-EE-A181 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29M TCGA-EE-A29T 
       33.73       109.64       168.26        47.84        44.35       345.96 
TCGA-EE-A29X TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GI TCGA-EE-A2GM TCGA-EE-A2GO 
       17.92        39.25        58.75        22.55        75.48       101.95 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2MM TCGA-EE-A2MQ TCGA-EE-A2MT 
       67.13        21.67       129.24       167.87        43.23        41.59 
TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A3ET TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1ZA 
       23.47        12.59        80.32       202.62        28.08        27.68 
TCGA-FS-A1ZC TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FW-A3I3 
      357.37        40.27        15.45         9.70        47.38         0.20 
TCGA-FW-A3TU TCGA-GN-A266 
       47.54        10.09 

$`DEL PEAK  6(4Q34.3) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2J8 
      112.54        71.80       121.22        31.59        43.40        65.49 
TCGA-D3-A2J9 TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CE TCGA-D3-A3CF 
       23.77        48.76        12.10        58.03        60.23        24.53 
TCGA-D3-A3MO TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV 
        9.30         2.70         6.38        11.34         3.22        48.89 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 
       20.38       194.83       176.55        35.93       107.34        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17X 
       65.92        23.44        68.09        28.60        10.49        29.82 
TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A29A 
        8.65        14.70        26.86         4.93        78.87        63.32 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P 
       13.97        39.62        32.19         2.56        18.58        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A2A0 TCGA-EE-A2A1 
       37.35        14.47        55.89        25.87        46.82        78.94 
TCGA-EE-A2A2 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       24.43        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR 
       89.33        54.71        55.00        90.94        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       55.59        19.56        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK 
      103.27       103.17        16.96       204.62        96.23       144.76 
TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MU 
      203.01        47.54       248.61       103.56       136.44        53.26 
TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
        4.24       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AH TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
      138.77        26.37         6.41       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX 
       79.99        33.21        80.48       160.60       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZH 
      228.59        20.91         7.76        48.85        53.52        32.71 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS 
       23.93       101.26        74.73       133.55        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 
       53.16        26.56        49.48        27.06        27.02        77.79 
TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 
       50.14        12.43        49.45        22.98        76.41       120.46 
TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
      117.93        84.72        64.41        62.76        32.48        39.58 

  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                         0.20                          2.56 
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                       357.37                        314.53 
  DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE 
                       43.790                        48.805 
[1] "0.2 - 357.4 (43.8)" "2.6 - 314.5 (48.8)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
  "DEL PEAK  6(4Q34.3) MUTATED"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK  6(4Q34.3) MUTATED" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  6(4Q34.3) WILD-TYPE"   "DEL PEAK  6(4Q34.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  6(4Q34.3) WILD-TYPE" "DEL PEAK  6(4Q34.3) WILD-TYPE" 
[1] "hr=" "1.3"
D30V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK  6(4Q34.3) MUTATED                    8             1
  DEL PEAK  6(4Q34.3) WILD-TYPE                 17             0
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK  6(4Q34.3) MUTATED                                                                                         12
  DEL PEAK  6(4Q34.3) WILD-TYPE                                                                                       23
                               vv
clus                            REGIONAL LYMPH NODE
  DEL PEAK  6(4Q34.3) MUTATED                    23
  DEL PEAK  6(4Q34.3) WILD-TYPE                  89
D30V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK  6(4Q34.3) MUTATED
  DISTANT METASTASIS                                                                                                 8
  PRIMARY TUMOR                                                                                                      1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          12
  REGIONAL LYMPH NODE                                                                                               23
                                                                                          clus
vv                                                                                         DEL PEAK  6(4Q34.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                  17
  PRIMARY TUMOR                                                                                                        0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            23
  REGIONAL LYMPH NODE                                                                                                 89
D30V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  6(4Q34.3) MUTATED     24   20
  DEL PEAK  6(4Q34.3) WILD-TYPE   43   86
        clus
vv       DEL PEAK  6(4Q34.3) MUTATED DEL PEAK  6(4Q34.3) WILD-TYPE
  FEMALE                          24                            43
  MALE                            20                            86
                               vv
clus                             M0  M1 M1A M1B M1C
  DEL PEAK  6(4Q34.3) MUTATED    38   1   0   2   0
  DEL PEAK  6(4Q34.3) WILD-TYPE 112   1   2   0   2
D30V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  6(4Q34.3) MUTATED   25  0   1   3  0   2   3   1  5  1
  DEL PEAK  6(4Q34.3) WILD-TYPE 70  2   6  13  1   2   8   4 11  1
D30V6, multiclass
D30V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK  6(4Q34.3) MUTATED             1       6        4        6        3
  DEL PEAK  6(4Q34.3) WILD-TYPE           3      11        6        8       16
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK  6(4Q34.3) MUTATED           0         0         4         0
  DEL PEAK  6(4Q34.3) WILD-TYPE         8        10         4         9
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  6(4Q34.3) MUTATED            2          5          5        2
  DEL PEAK  6(4Q34.3) WILD-TYPE          4         13         18        4
D30V8, multiclass

Clustering(31) Variable = Del Peak  7(5q11.2) mutation analysis
D31V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  7(5Q11.2) MUTATED   30 23
  DEL PEAK  7(5Q11.2) WILD-TYPE 53 64
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                           53                           117 
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                           23                            64 
$`DEL PEAK  7(5Q11.2) MUTATED`
TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC 
       28.08        31.59        11.87        12.10        58.03        71.24 
TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1HW 
       21.47       148.31         6.38        11.34        48.89        36.03 
TCGA-DA-A1I0 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A185 
       20.38       107.34        61.18       215.44        29.82         4.93 
TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29M TCGA-EE-A29P 
      168.26        47.84        13.97        39.62        44.35        56.42 
TCGA-EE-A29Q TCGA-EE-A29V TCGA-EE-A2A2 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       37.35        25.87        24.43        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GM TCGA-EE-A2GR TCGA-EE-A2MJ TCGA-EE-A2MM 
      135.91        22.55        75.48        14.30        96.23       167.87 
TCGA-EE-A2MP TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AH TCGA-FR-A44A 
      248.61       122.73         3.68        26.73       138.77       160.60 
TCGA-FS-A1YX TCGA-FS-A1ZK TCGA-FS-A1ZQ TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A1ZY 
       48.59        23.93       133.55        53.16        49.48        27.06 
TCGA-FS-A4F2 TCGA-GN-A262 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
       50.14       120.46        10.09        64.41        62.76 

$`DEL PEAK  7(5Q11.2) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A2J6 TCGA-D3-A2J8 
       16.57       112.54        71.80       121.22        43.40        65.49 
TCGA-D3-A2J9 TCGA-D3-A2JF TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D9-A149 
       23.77        48.76        60.23        24.53         9.30        49.74 
TCGA-D9-A1JW TCGA-D9-A3Z3 TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 
        2.70         3.22       117.17       194.83       176.55        35.93 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
       53.92        65.92        23.44        68.09        28.60        10.49 
TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20B 
       15.68         8.65        33.73        14.70        26.86       109.64 
TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29R 
       78.87        63.32        32.19         2.56        18.58        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 
       55.89       345.96        17.92        46.82        78.94        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN 
       58.75       182.01        89.33        54.71        55.00        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 
      101.95        13.87        55.59        19.56        67.13        21.67 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
      129.24        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MN 
      103.17        16.96       204.62       144.76       203.01        47.54 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA 
       43.23       103.56       136.44        41.59        53.26         4.24 
TCGA-EE-A3AC TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       25.84        13.81        23.47        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL 
      131.08        61.05        44.05        79.99        80.32        33.21 
TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 
       80.48       216.92       228.59       202.62        20.91        28.08 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE 
        7.76        27.68        48.85       357.37        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZP 
       15.45         9.70        32.71        47.38       101.26        74.73 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 
       11.41       148.77        26.56        27.02        77.79        12.43 
TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A264 
       49.45         0.20        22.98        47.54        76.41       117.93 
TCGA-GN-A265 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        32.48        39.58 

  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                         3.68                          0.20 
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                       314.53                        357.37 
  DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE 
                        47.84                         47.54 
[1] "3.7 - 314.5 (47.8)" "0.2 - 357.4 (47.5)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  7(5Q11.2) MUTATED" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  7(5Q11.2) WILD-TYPE"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  7(5Q11.2) MUTATED"   "DEL PEAK  7(5Q11.2) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  7(5Q11.2) WILD-TYPE" "DEL PEAK  7(5Q11.2) WILD-TYPE" 
[1] "hr=" "1.3"
D31V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK  7(5Q11.2) MUTATED                    9             1
  DEL PEAK  7(5Q11.2) WILD-TYPE                 16             0
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK  7(5Q11.2) MUTATED                                                                                         11
  DEL PEAK  7(5Q11.2) WILD-TYPE                                                                                       24
                               vv
clus                            REGIONAL LYMPH NODE
  DEL PEAK  7(5Q11.2) MUTATED                    33
  DEL PEAK  7(5Q11.2) WILD-TYPE                  79
D31V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK  7(5Q11.2) MUTATED
  DISTANT METASTASIS                                                                                                 9
  PRIMARY TUMOR                                                                                                      1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          11
  REGIONAL LYMPH NODE                                                                                               33
                                                                                          clus
vv                                                                                         DEL PEAK  7(5Q11.2) WILD-TYPE
  DISTANT METASTASIS                                                                                                  16
  PRIMARY TUMOR                                                                                                        0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            24
  REGIONAL LYMPH NODE                                                                                                 79
D31V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  7(5Q11.2) MUTATED     22   32
  DEL PEAK  7(5Q11.2) WILD-TYPE   45   74
        clus
vv       DEL PEAK  7(5Q11.2) MUTATED DEL PEAK  7(5Q11.2) WILD-TYPE
  FEMALE                          22                            45
  MALE                            32                            74
                               vv
clus                             M0  M1 M1A M1B M1C
  DEL PEAK  7(5Q11.2) MUTATED    46   0   1   2   1
  DEL PEAK  7(5Q11.2) WILD-TYPE 104   2   1   0   1
D31V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  7(5Q11.2) MUTATED   28  0   3   7  0   2   3   0  6  1
  DEL PEAK  7(5Q11.2) WILD-TYPE 67  2   4   9  1   2   8   5 10  1
D31V6, multiclass
D31V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK  7(5Q11.2) MUTATED             2       5        3        3        5
  DEL PEAK  7(5Q11.2) WILD-TYPE           2      12        7       11       14
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK  7(5Q11.2) MUTATED           0         5         4         1
  DEL PEAK  7(5Q11.2) WILD-TYPE         8         5         4         8
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  7(5Q11.2) MUTATED            2          8          8        2
  DEL PEAK  7(5Q11.2) WILD-TYPE          4         10         15        4
D31V8, multiclass

Clustering(32) Variable = Del Peak  8(5q31.3) mutation analysis
D32V1, survival
                               sevent
clus2                            0  1
  DEL PEAK  8(5Q31.3) MUTATED   38 30
  DEL PEAK  8(5Q31.3) WILD-TYPE 45 57
  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                           68                           102 
  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                           30                            57 
$`DEL PEAK  8(5Q31.3) MUTATED`
TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC 
       28.08        31.59        11.87        12.10        58.03        71.24 
TCGA-D3-A3CF TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HV 
       24.53        21.47       148.31         6.38        11.34        48.89 
TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
       36.03       117.17        20.38       107.34        61.18        53.92 
TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A185 TCGA-EE-A20H TCGA-EE-A29C 
      215.44        29.82         8.65         4.93       168.26        47.84 
TCGA-EE-A29E TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29V 
       39.62        44.35        56.42        37.35        55.89        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       17.92        46.82        24.43        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GM TCGA-EE-A2GR TCGA-EE-A2GT 
      135.91        22.55        89.33        75.48        14.30        19.56 
TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2MG TCGA-EE-A2MJ TCGA-EE-A2MM TCGA-EE-A2MP 
      129.24        28.80       103.17        96.23       167.87       248.61 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AH 
       43.23       103.56       122.73         3.68        26.73       138.77 
TCGA-FR-A44A TCGA-FS-A1YX TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZF TCGA-FS-A1ZM 
      160.60        48.59        48.85       357.37        15.45       101.26 
TCGA-FS-A1ZQ TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A4F0 TCGA-GN-A262 TCGA-GN-A266 
      133.55        53.16        49.48        77.79       120.46        10.09 
TCGA-GN-A267 TCGA-GN-A268 
       64.41        62.76 

$`DEL PEAK  8(5Q31.3) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A2J6 TCGA-D3-A2J8 
       16.57       112.54        71.80       121.22        43.40        65.49 
TCGA-D3-A2J9 TCGA-D3-A2JF TCGA-D3-A3CE TCGA-D3-A3MO TCGA-D9-A149 TCGA-D9-A1JW 
       23.77        48.76        60.23         9.30        49.74         2.70 
TCGA-D9-A3Z3 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1IA TCGA-DA-A1IB 
        3.22       194.83       176.55        35.93        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A181 TCGA-EE-A182 
       68.09        28.60        10.49        15.68        33.73        14.70 
TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29H 
       26.86       109.64        78.87        63.32        13.97        32.19 
TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A2A1 TCGA-EE-A2A5 
        2.56        18.58        14.47       345.96        78.94        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GH TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO 
       58.75       182.01        54.71        55.00        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M8 TCGA-EE-A2MC 
       13.87        55.59        67.13        21.67        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML 
       47.28       103.27        16.96       204.62       144.76       203.01 
TCGA-EE-A2MN TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AC 
       47.54       136.44        41.59        53.26         4.24        25.84 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L 
       13.81        23.47        12.59        26.37         6.41       131.08 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN 
       61.05        44.05        79.99        80.32        33.21        80.48 
TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 
      216.92       228.59       202.62        20.91        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       27.68        53.52        40.27         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZY 
       23.93        74.73        11.41       148.77        26.56        27.06 
TCGA-FS-A1ZZ TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 
       27.02        50.14        12.43        49.45         0.20        22.98 
TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A26A TCGA-GN-A26D 
       47.54        76.41       117.93        84.72        32.48        39.58 

  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                         3.68                          0.20 
  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                       357.37                        345.96 
  DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE 
                       48.870                        45.665 
[1] "3.7 - 357.4 (48.9)" "0.2 - 346.0 (45.7)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
  "DEL PEAK  8(5Q31.3) MUTATED" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
                   TCGA-GN-A265                    TCGA-GN-A266 
"DEL PEAK  8(5Q31.3) WILD-TYPE"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
  "DEL PEAK  8(5Q31.3) MUTATED"   "DEL PEAK  8(5Q31.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK  8(5Q31.3) WILD-TYPE" "DEL PEAK  8(5Q31.3) WILD-TYPE" 
[1] "hr=" "1.5"
D32V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK  8(5Q31.3) MUTATED                    9             1
  DEL PEAK  8(5Q31.3) WILD-TYPE                 16             0
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK  8(5Q31.3) MUTATED                                                                                         14
  DEL PEAK  8(5Q31.3) WILD-TYPE                                                                                       21
                               vv
clus                            REGIONAL LYMPH NODE
  DEL PEAK  8(5Q31.3) MUTATED                    45
  DEL PEAK  8(5Q31.3) WILD-TYPE                  67
D32V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK  8(5Q31.3) MUTATED
  DISTANT METASTASIS                                                                                                 9
  PRIMARY TUMOR                                                                                                      1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          14
  REGIONAL LYMPH NODE                                                                                               45
                                                                                          clus
vv                                                                                         DEL PEAK  8(5Q31.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                  16
  PRIMARY TUMOR                                                                                                        0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            21
  REGIONAL LYMPH NODE                                                                                                 67
D32V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK  8(5Q31.3) MUTATED     28   41
  DEL PEAK  8(5Q31.3) WILD-TYPE   39   65
        clus
vv       DEL PEAK  8(5Q31.3) MUTATED DEL PEAK  8(5Q31.3) WILD-TYPE
  FEMALE                          28                            39
  MALE                            41                            65
                               vv
clus                            M0 M1 M1A M1B M1C
  DEL PEAK  8(5Q31.3) MUTATED   61  0   1   2   1
  DEL PEAK  8(5Q31.3) WILD-TYPE 89  2   1   0   1
D32V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  8(5Q31.3) MUTATED   39  0   3   6  0   3   3   1  9  1
  DEL PEAK  8(5Q31.3) WILD-TYPE 56  2   4  10  1   1   8   4  7  1
D32V6, multiclass
D32V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK  8(5Q31.3) MUTATED             3       8        4        4        6
  DEL PEAK  8(5Q31.3) WILD-TYPE           1       9        6       10       13
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK  8(5Q31.3) MUTATED           3         6         4         2
  DEL PEAK  8(5Q31.3) WILD-TYPE         5         4         4         7
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  8(5Q31.3) MUTATED            3          8         10        2
  DEL PEAK  8(5Q31.3) WILD-TYPE          3         10         13        4
D32V8, multiclass

Clustering(33) Variable = Del Peak  9(6q26) mutation analysis
D33V1, survival
                             sevent
clus2                          0  1
  DEL PEAK  9(6Q26) MUTATED   49 54
  DEL PEAK  9(6Q26) WILD-TYPE 34 33
  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                        103                          67 
  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                         54                          33 
$`DEL PEAK  9(6Q26) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2JD TCGA-D3-A2JF 
       16.57       112.54        31.59        43.40        11.87        48.76 
TCGA-D3-A3C6 TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW 
       58.03        60.23        24.53       148.31        49.74         2.70 
TCGA-D9-A1JX TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I4 
        6.38         3.22        48.89       117.17       194.83        35.93 
TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 TCGA-DA-A3F5 
       61.18        53.92        65.92        68.09        10.49       215.44 
TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H 
       33.73        14.70        26.86         4.93       109.64       168.26 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M 
       63.32        47.84        13.97        32.19         2.56        44.35 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X 
       37.35        14.47        55.89       345.96        25.87        17.92 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD 
       78.94        24.43        39.25        58.75        47.54       314.53 
TCGA-EE-A2GE TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS 
      135.91        55.00        90.94       101.95        13.87        55.59 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2MC TCGA-EE-A2MH 
       67.13        21.67       129.24        28.80        61.51        16.96 
TCGA-EE-A2MK TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB 
      144.76       248.61       136.44        41.59        53.26       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F 
       25.84         3.68        13.81        23.47        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19N TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1Z0 
        6.41        44.05        33.21       216.92        48.59       202.62 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZG 
       27.68        48.85       357.37        53.52        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS 
       32.71        47.38       101.26       133.55        11.41       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F2 
       53.16        26.56        49.48        27.06        27.02        50.14 
TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A267 TCGA-GN-A268 
        0.20        22.98        47.54       117.93        64.41        62.76 
TCGA-GN-A26A 
       32.48 

$`DEL PEAK  9(6Q26) WILD-TYPE`
TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JK 
       71.80       121.22        28.08        65.49        23.77        12.10 
TCGA-D3-A3CC TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A3Z1 TCGA-DA-A1HW TCGA-DA-A1I0 
       71.24         9.30        21.47        11.34        36.03        20.38 
TCGA-DA-A1I2 TCGA-DA-A1I5 TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X 
      176.55       107.34        23.44        28.60        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A20F TCGA-EE-A29E TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A2A0 
        8.65        78.87        39.62        18.58        56.42        46.82 
TCGA-EE-A2GC TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GM 
       43.23       182.01        22.55        89.33        54.71        75.48 
TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG 
       14.30        19.56        19.76        47.28       103.27       103.17 
TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ 
      204.62        96.23       203.01       167.87        47.54        43.23 
TCGA-EE-A2MR TCGA-EE-A3AA TCGA-EE-A3AE TCGA-EE-A3AH TCGA-ER-A19L TCGA-ER-A19M 
      103.56         4.24        26.73       138.77       131.08        61.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YY TCGA-FS-A1Z3 
       79.99        80.32        80.48       160.60       228.59        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZE TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A4F0 
       28.08         7.76        40.27        23.93        74.73        77.79 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A266 
       12.43        49.45        76.41       120.46        84.72        10.09 
TCGA-GN-A26D 
       39.58 

  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                       0.20                        4.24 
  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                     357.37                      228.59 
  DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE 
                      47.54                       47.54 
[1] "0.2 - 357.4 (47.5)" "4.2 - 228.6 (47.5)"
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-D9-A148                  TCGA-D9-A149 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"DEL PEAK  9(6Q26) WILD-TYPE"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK  9(6Q26) WILD-TYPE" "DEL PEAK  9(6Q26) WILD-TYPE" 
                 TCGA-GN-A267                  TCGA-GN-A268 
  "DEL PEAK  9(6Q26) MUTATED"   "DEL PEAK  9(6Q26) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "DEL PEAK  9(6Q26) MUTATED" "DEL PEAK  9(6Q26) WILD-TYPE" 
[1] "hr=" "1.1"
D33V2, continuous
                             vv
clus                          DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK  9(6Q26) MUTATED                   19             1
  DEL PEAK  9(6Q26) WILD-TYPE                  6             0
                             vv
clus                          REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK  9(6Q26) MUTATED                                                                                         21
  DEL PEAK  9(6Q26) WILD-TYPE                                                                                       14
                             vv
clus                          REGIONAL LYMPH NODE
  DEL PEAK  9(6Q26) MUTATED                    63
  DEL PEAK  9(6Q26) WILD-TYPE                  49
D33V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK  9(6Q26) MUTATED
  DISTANT METASTASIS                                                                                              19
  PRIMARY TUMOR                                                                                                    1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                        21
  REGIONAL LYMPH NODE                                                                                             63
                                                                                          clus
vv                                                                                         DEL PEAK  9(6Q26) WILD-TYPE
  DISTANT METASTASIS                                                                                                 6
  PRIMARY TUMOR                                                                                                      0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          14
  REGIONAL LYMPH NODE                                                                                               49
D33V4, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK  9(6Q26) MUTATED     42   62
  DEL PEAK  9(6Q26) WILD-TYPE   25   44
        clus
vv       DEL PEAK  9(6Q26) MUTATED DEL PEAK  9(6Q26) WILD-TYPE
  FEMALE                        42                          25
  MALE                          62                          44
                             vv
clus                          M0 M1 M1A M1B M1C
  DEL PEAK  9(6Q26) MUTATED   91  2   1   1   1
  DEL PEAK  9(6Q26) WILD-TYPE 59  0   1   1   1
D33V5, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK  9(6Q26) MUTATED   54  0   6  12  1   2   5   4 10  2
  DEL PEAK  9(6Q26) WILD-TYPE 41  2   1   4  0   2   6   1  6  0
D33V6, multiclass
D33V7, continuous
                             vv
clus                          I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK  9(6Q26) MUTATED             3       9        6       10       10
  DEL PEAK  9(6Q26) WILD-TYPE           1       8        4        4        9
                             vv
clus                          STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK  9(6Q26) MUTATED           4         6         3         4
  DEL PEAK  9(6Q26) WILD-TYPE         4         4         5         5
                             vv
clus                          STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK  9(6Q26) MUTATED            4         13         14        4
  DEL PEAK  9(6Q26) WILD-TYPE          2          5          9        2
D33V8, multiclass

Clustering(34) Variable = Del Peak 10(8p23.3) mutation analysis
D34V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 10(8P23.3) MUTATED   18 24
  DEL PEAK 10(8P23.3) WILD-TYPE 65 63
  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                           42                           128 
  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                           24                            63 
$`DEL PEAK 10(8P23.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2JD TCGA-D3-A3C6 TCGA-D3-A3MO 
       16.57        31.59        43.40        11.87        58.03         9.30 
TCGA-D9-A148 TCGA-D9-A1JW TCGA-DA-A1IA TCGA-DA-A3F3 TCGA-EE-A183 TCGA-EE-A29C 
      148.31         2.70        65.92        10.49        26.86        47.84 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29V TCGA-EE-A2A2 TCGA-EE-A2A5 
       32.19         2.56        44.35        25.87        24.43        39.25 
TCGA-EE-A2GI TCGA-EE-A2GS TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MM 
       22.55        55.59       103.17        16.96       204.62       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC 
       47.54       248.61       136.44        53.26       122.73        25.84 
TCGA-EE-A3AG TCGA-ER-A19J TCGA-ER-A3PL TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1ZA 
       23.47         6.41        33.21       228.59       202.62        27.68 
TCGA-FS-A1ZC TCGA-FS-A1ZJ TCGA-FS-A1ZT TCGA-FW-A3R5 TCGA-GN-A264 TCGA-GN-A265 
      357.37        47.38        53.16        22.98       117.93        84.72 

$`DEL PEAK 10(8P23.3) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J8 TCGA-D3-A2J9 
      112.54        71.80       121.22        28.08        65.49        23.77 
TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D3-A3MV 
       48.76        12.10        71.24        60.23        24.53        21.47 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW 
       49.74         6.38        11.34         3.22        48.89        36.03 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 
      117.17        20.38       194.83       176.55        35.93       107.34 
TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F5 
       61.18        53.92        23.44        68.09        28.60       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 
       15.68        29.82         8.65        33.73        14.70         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29D TCGA-EE-A29E 
      109.64        78.87       168.26        63.32        13.97        39.62 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       17.92        46.82        78.94        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      314.53       135.91       182.01        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GT 
       75.48        90.94       101.95        13.87        14.30        19.56 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       67.13        21.67       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MQ 
       47.28       103.27        96.23       144.76       203.01        43.23 
TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AA TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
      103.56        41.59         4.24         3.68        26.73        13.81 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
      138.77        12.59        26.37       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX 
       79.99        80.32        80.48       160.60       216.92        48.59 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       20.91        28.08         7.76        48.85        53.52        40.27 
TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP 
       15.45         9.70        32.71        23.93       101.26        74.73 
TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
      133.55        11.41       148.77        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 
       27.02        77.79        50.14        12.43        49.45         0.20 
TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
       47.54        76.41       120.46        10.09        64.41        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                         2.56                          0.20 
  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                       357.37                        345.96 
  DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE 
                       43.875                        48.805 
[1] "2.6 - 357.4 (43.9)" "0.2 - 346.0 (48.8)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A182                    TCGA-EE-A183 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK 10(8P23.3) MUTATED"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK 10(8P23.3) WILD-TYPE"   "DEL PEAK 10(8P23.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
  "DEL PEAK 10(8P23.3) MUTATED" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
"DEL PEAK 10(8P23.3) WILD-TYPE" "DEL PEAK 10(8P23.3) WILD-TYPE" 
[1] "hr=" "1"  
D34V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 10(8P23.3) MUTATED                    7             1
  DEL PEAK 10(8P23.3) WILD-TYPE                 18             0
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 10(8P23.3) MUTATED                                                                                          5
  DEL PEAK 10(8P23.3) WILD-TYPE                                                                                       30
                               vv
clus                            REGIONAL LYMPH NODE
  DEL PEAK 10(8P23.3) MUTATED                    29
  DEL PEAK 10(8P23.3) WILD-TYPE                  83
D34V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 10(8P23.3) MUTATED
  DISTANT METASTASIS                                                                                                 7
  PRIMARY TUMOR                                                                                                      1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           5
  REGIONAL LYMPH NODE                                                                                               29
                                                                                          clus
vv                                                                                         DEL PEAK 10(8P23.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                  18
  PRIMARY TUMOR                                                                                                        0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            30
  REGIONAL LYMPH NODE                                                                                                 83
D34V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 10(8P23.3) MUTATED     12   30
  DEL PEAK 10(8P23.3) WILD-TYPE   55   76
        clus
vv       DEL PEAK 10(8P23.3) MUTATED DEL PEAK 10(8P23.3) WILD-TYPE
  FEMALE                          12                            55
  MALE                            30                            76
                               vv
clus                             M0  M1 M1A M1B M1C
  DEL PEAK 10(8P23.3) MUTATED    34   1   1   1   0
  DEL PEAK 10(8P23.3) WILD-TYPE 116   1   1   1   2
D34V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 10(8P23.3) MUTATED   22  0   0   5  1   2   1   2  4  0
  DEL PEAK 10(8P23.3) WILD-TYPE 73  2   7  11  0   2  10   3 12  2
D34V6, multiclass
D34V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 10(8P23.3) MUTATED             1       6        4        5        2
  DEL PEAK 10(8P23.3) WILD-TYPE           3      11        6        9       17
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 10(8P23.3) MUTATED           1         2         0         3
  DEL PEAK 10(8P23.3) WILD-TYPE         7         8         8         6
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 10(8P23.3) MUTATED            0          5          4        2
  DEL PEAK 10(8P23.3) WILD-TYPE          6         13         19        4
D34V8, multiclass

Clustering(35) Variable = Del Peak 11(9p23) mutation analysis
D35V1, survival
                             sevent
clus2                          0  1
  DEL PEAK 11(9P23) MUTATED   57 61
  DEL PEAK 11(9P23) WILD-TYPE 26 26
  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                        118                          52 
  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                         61                          26 
$`DEL PEAK 11(9P23) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q8 TCGA-D3-A2J6 TCGA-D3-A2JF 
       16.57       112.54        71.80        28.08        43.40        48.76 
TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV 
       12.10        58.03        71.24        24.53         9.30        21.47 
TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW 
       49.74         6.38        11.34         3.22        48.89        36.03 
TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 
      117.17       194.83       176.55        35.93       107.34        53.92 
TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A182 
       65.92        68.09        10.49        29.82        33.73        14.70 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29D 
        4.93       109.64        78.87       168.26        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S 
       39.62         2.56        18.58        56.42        37.35        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A5 TCGA-EE-A2A6 
      345.96        25.87        17.92        46.82        39.25        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GL 
       47.54        43.23       314.53       135.91        22.55        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       75.48        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2MH 
       67.13        21.67       129.24        19.76        47.28        16.96 
TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP 
      204.62       144.76       203.01       167.87        47.54       248.61 
TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE 
      103.56       136.44         4.24       122.73         3.68        26.73 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19L 
       13.81        23.47       138.77        12.59        26.37       131.08 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW 
       61.05        44.05        33.21        80.48       160.60       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
       48.59       228.59        20.91         7.76        27.68        48.85 
TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZM TCGA-FS-A1ZQ 
      357.37        53.52        15.45        32.71       101.26       133.55 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A4F0 
       11.41       148.77        53.16        49.48        27.06        77.79 
TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A264 
       50.14        12.43        49.45        22.98        47.54       117.93 
TCGA-GN-A266 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       10.09        62.76        32.48        39.58 

$`DEL PEAK 11(9P23) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A1Q9 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A3CE 
      121.22        31.59        65.49        23.77        11.87        60.23 
TCGA-D9-A148 TCGA-D9-A1JW TCGA-DA-A1I0 TCGA-DA-A1I7 TCGA-DA-A1IB TCGA-DA-A3F2 
      148.31         2.70        20.38        61.18        23.44        28.60 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A183 TCGA-EE-A29A TCGA-EE-A29H 
      215.44        15.68         8.65        26.86        63.32        32.19 
TCGA-EE-A29M TCGA-EE-A29R TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2GH TCGA-EE-A2GJ 
       44.35        14.47        78.94        24.43       182.01        89.33 
TCGA-EE-A2GK TCGA-EE-A2GT TCGA-EE-A2M7 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG 
       54.71        19.56        28.80        61.51       103.27       103.17 
TCGA-EE-A2MJ TCGA-EE-A2MQ TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AC TCGA-ER-A19J 
       96.23        43.23        41.59        53.26        25.84         6.41 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1ZE TCGA-FS-A1ZG 
       79.99        80.32       202.62        28.08        40.27         9.70 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZU TCGA-FS-A1ZZ TCGA-FW-A3I3 
       47.38        23.93        74.73        26.56        27.02         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A267 
       76.41       120.46        84.72        64.41 

  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                       2.56                        0.20 
  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                     357.37                      215.44 
  DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE 
                     48.215                      43.790 
[1] "2.6 - 357.4 (48.2)" "0.2 - 215.4 (43.8)"
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A1Q1                  TCGA-D3-A1Q5 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A1Q6                  TCGA-D3-A1Q7 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D3-A1Q8                  TCGA-D3-A1Q9 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D3-A2J6                  TCGA-D3-A2J8 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D3-A2J9                  TCGA-D3-A2JD 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-D3-A2JF                  TCGA-D3-A2JK 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3C6                  TCGA-D3-A3CC 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3CE                  TCGA-D3-A3CF 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D3-A3MO                  TCGA-D3-A3MV 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D9-A148                  TCGA-D9-A149 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D9-A1JW                  TCGA-D9-A1JX 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-D9-A3Z1                  TCGA-D9-A3Z3 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1HV                  TCGA-DA-A1HW 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1HY                  TCGA-DA-A1I0 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A1I1                  TCGA-DA-A1I2 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I4                  TCGA-DA-A1I5 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1I7                  TCGA-DA-A1I8 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-DA-A1IA                  TCGA-DA-A1IB 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A1IC                  TCGA-DA-A3F2 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A3F3                  TCGA-DA-A3F5 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-DA-A3F8                  TCGA-EE-A17X 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A17Z                  TCGA-EE-A181 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A182                  TCGA-EE-A183 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A185                  TCGA-EE-A20B 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A20F                  TCGA-EE-A20H 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29A                  TCGA-EE-A29C 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29D                  TCGA-EE-A29E 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29H                  TCGA-EE-A29L 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29M                  TCGA-EE-A29N 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29P                  TCGA-EE-A29Q 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29R                  TCGA-EE-A29S 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29T                  TCGA-EE-A29V 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A29X                  TCGA-EE-A2A0 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2A1                  TCGA-EE-A2A2 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2A5                  TCGA-EE-A2A6 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GB                  TCGA-EE-A2GC 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GD                  TCGA-EE-A2GE 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GH                  TCGA-EE-A2GI 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GJ                  TCGA-EE-A2GK 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2GL                  TCGA-EE-A2GM 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GN                  TCGA-EE-A2GO 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GP                  TCGA-EE-A2GR 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2GS                  TCGA-EE-A2GT 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2GU                  TCGA-EE-A2M5 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2M6                  TCGA-EE-A2M7 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2M8                  TCGA-EE-A2MC 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MD                  TCGA-EE-A2ME 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MG                  TCGA-EE-A2MH 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MI                  TCGA-EE-A2MJ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MK                  TCGA-EE-A2ML 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MM                  TCGA-EE-A2MN 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MP                  TCGA-EE-A2MQ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A2MR                  TCGA-EE-A2MS 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A2MT                  TCGA-EE-A2MU 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-EE-A3AA                  TCGA-EE-A3AB 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AC                  TCGA-EE-A3AD 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AE                  TCGA-EE-A3AF 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-EE-A3AG                  TCGA-EE-A3AH 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19D                  TCGA-ER-A19F 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19J                  TCGA-ER-A19L 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A19M                  TCGA-ER-A19N 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-ER-A1A1                  TCGA-ER-A3ET 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-ER-A3PL                  TCGA-FR-A3YN 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FR-A44A                  TCGA-FS-A1YW 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1YX                  TCGA-FS-A1YY 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1Z0                  TCGA-FS-A1Z3 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1Z4                  TCGA-FS-A1Z7 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZA                  TCGA-FS-A1ZB 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZC                  TCGA-FS-A1ZD 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZE                  TCGA-FS-A1ZF 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZG                  TCGA-FS-A1ZH 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZJ                  TCGA-FS-A1ZK 
"DEL PEAK 11(9P23) WILD-TYPE" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZM                  TCGA-FS-A1ZP 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A1ZQ                  TCGA-FS-A1ZR 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZS                  TCGA-FS-A1ZT 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZU                  TCGA-FS-A1ZW 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A1ZY                  TCGA-FS-A1ZZ 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-FS-A4F0                  TCGA-FS-A4F2 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FS-A4F9                  TCGA-FS-A4FC 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FW-A3I3                  TCGA-FW-A3R5 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-FW-A3TU                  TCGA-GN-A261 
  "DEL PEAK 11(9P23) MUTATED" "DEL PEAK 11(9P23) WILD-TYPE" 
                 TCGA-GN-A262                  TCGA-GN-A264 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A265                  TCGA-GN-A266 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A267                  TCGA-GN-A268 
"DEL PEAK 11(9P23) WILD-TYPE"   "DEL PEAK 11(9P23) MUTATED" 
                 TCGA-GN-A26A                  TCGA-GN-A26D 
  "DEL PEAK 11(9P23) MUTATED"   "DEL PEAK 11(9P23) MUTATED" 
[1] "hr=" "1.1"
D35V2, continuous
                             vv
clus                          DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 11(9P23) MUTATED                   18             0
  DEL PEAK 11(9P23) WILD-TYPE                  7             1
                             vv
clus                          REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 11(9P23) MUTATED                                                                                         28
  DEL PEAK 11(9P23) WILD-TYPE                                                                                        7
                             vv
clus                          REGIONAL LYMPH NODE
  DEL PEAK 11(9P23) MUTATED                    75
  DEL PEAK 11(9P23) WILD-TYPE                  37
D35V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 11(9P23) MUTATED
  DISTANT METASTASIS                                                                                              18
  PRIMARY TUMOR                                                                                                    0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                        28
  REGIONAL LYMPH NODE                                                                                             75
                                                                                          clus
vv                                                                                         DEL PEAK 11(9P23) WILD-TYPE
  DISTANT METASTASIS                                                                                                 7
  PRIMARY TUMOR                                                                                                      1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           7
  REGIONAL LYMPH NODE                                                                                               37
D35V4, binary
[1] "tbl2"
                             cls
clus                          [,1] [,2]
  DEL PEAK 11(9P23) MUTATED     50   71
  DEL PEAK 11(9P23) WILD-TYPE   17   35
        clus
vv       DEL PEAK 11(9P23) MUTATED DEL PEAK 11(9P23) WILD-TYPE
  FEMALE                        50                          17
  MALE                          71                          35
                             vv
clus                           M0  M1 M1A M1B M1C
  DEL PEAK 11(9P23) MUTATED   105   0   1   1   2
  DEL PEAK 11(9P23) WILD-TYPE  45   2   1   1   0
D35V5, multiclass
                             vv
clus                          N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 11(9P23) MUTATED   68  1   4  12  1   1   6   5 10  2
  DEL PEAK 11(9P23) WILD-TYPE 27  1   3   4  0   3   5   0  6  0
D35V6, multiclass
D35V7, continuous
                             vv
clus                          I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 11(9P23) MUTATED             4       9        6        9       15
  DEL PEAK 11(9P23) WILD-TYPE           0       8        4        5        4
                             vv
clus                          STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 11(9P23) MUTATED           7         8         6         7
  DEL PEAK 11(9P23) WILD-TYPE         1         2         2         2
                             vv
clus                          STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 11(9P23) MUTATED            2         13         15        4
  DEL PEAK 11(9P23) WILD-TYPE          4          5          8        2
D35V8, multiclass

Clustering(36) Variable = Del Peak 12(9p21.3) mutation analysis
D36V1, survival
                               sevent
clus2                            0  1
  DEL PEAK 12(9P21.3) MUTATED   67 67
  DEL PEAK 12(9P21.3) WILD-TYPE 16 20
  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                          134                            36 
  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                           67                            20 
$`DEL PEAK 12(9P21.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q8 TCGA-D3-A2J6 TCGA-D3-A2JF 
       16.57       112.54        71.80        28.08        43.40        48.76 
TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D3-A3MO 
       12.10        58.03        71.24        60.23        24.53         9.30 
TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 
       21.47       148.31        49.74         6.38        11.34         3.22 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 
       48.89        36.03       117.17       194.83       176.55        35.93 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F3 
      107.34        61.18        53.92        65.92        68.09        10.49 
TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20B 
      215.44        29.82        33.73        14.70         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
       78.87       168.26        63.32        47.84        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R 
       32.19         2.56        18.58        56.42        37.35        14.47 
TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A5 
       55.89       345.96        25.87        17.92        46.82        39.25 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       22.55        55.00        75.48        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M8 
       14.30        55.59        67.13        21.67       129.24        19.76 
TCGA-EE-A2MD TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM 
       47.28        16.96       204.62       144.76       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A3AA TCGA-EE-A3AB 
       47.54       248.61       103.56       136.44         4.24       122.73 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
       12.59        26.37         6.41       131.08        61.05        44.05 
TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       33.21        80.48       160.60       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC 
      202.62        20.91         7.76        27.68        48.85       357.37 
TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       53.52        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZW 
      101.26       133.55        11.41       148.77        53.16        49.48 
TCGA-FS-A1ZY TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 
       27.06        77.79        50.14        12.43        49.45         0.20 
TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A268 
       22.98        47.54       117.93        84.72        10.09        62.76 
TCGA-GN-A26A TCGA-GN-A26D 
       32.48        39.58 

$`DEL PEAK 12(9P21.3) WILD-TYPE`
TCGA-D3-A1Q7 TCGA-D3-A1Q9 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D9-A1JW 
      121.22        31.59        65.49        23.77        11.87         2.70 
TCGA-DA-A1I0 TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A183 
       20.38        23.44        28.60        15.68         8.65        26.86 
TCGA-EE-A29M TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GT 
       44.35        78.94        24.43        89.33        54.71        19.56 
TCGA-EE-A2M7 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MJ TCGA-EE-A2MQ 
       28.80        61.51       103.27       103.17        96.23        43.23 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1Z4 TCGA-FS-A1ZK 
       41.59        53.26        79.99        80.32        28.08        23.93 
TCGA-FS-A1ZP TCGA-FS-A1ZU TCGA-FS-A1ZZ TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A267 
       74.73        26.56        27.02        76.41       120.46        64.41 

  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                          0.2                           2.7 
  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                       357.37                        121.22 
  DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE 
                       48.215                        42.410 
[1] "0.2 - 357.4 (48.2)" "2.7 - 121.2 (42.4)"
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A1Q1                    TCGA-D3-A1Q5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A1Q6                    TCGA-D3-A1Q7 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D3-A1Q8                    TCGA-D3-A1Q9 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D3-A2J6                    TCGA-D3-A2J8 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D3-A2J9                    TCGA-D3-A2JD 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-D3-A2JF                    TCGA-D3-A2JK 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3C6                    TCGA-D3-A3CC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3CE                    TCGA-D3-A3CF 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D3-A3MO                    TCGA-D3-A3MV 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A148                    TCGA-D9-A149 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A1JW                    TCGA-D9-A1JX 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-D9-A3Z1                    TCGA-D9-A3Z3 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1HV                    TCGA-DA-A1HW 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1HY                    TCGA-DA-A1I0 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-DA-A1I1                    TCGA-DA-A1I2 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I4                    TCGA-DA-A1I5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1I7                    TCGA-DA-A1I8 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A1IA                    TCGA-DA-A1IB 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-DA-A1IC                    TCGA-DA-A3F2 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-DA-A3F3                    TCGA-DA-A3F5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-DA-A3F8                    TCGA-EE-A17X 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A17Z                    TCGA-EE-A181 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A182                    TCGA-EE-A183 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A185                    TCGA-EE-A20B 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A20F                    TCGA-EE-A20H 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29A                    TCGA-EE-A29C 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29D                    TCGA-EE-A29E 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29H                    TCGA-EE-A29L 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29M                    TCGA-EE-A29N 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29P                    TCGA-EE-A29Q 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29R                    TCGA-EE-A29S 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29T                    TCGA-EE-A29V 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A29X                    TCGA-EE-A2A0 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2A1                    TCGA-EE-A2A2 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2A5                    TCGA-EE-A2A6 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GB                    TCGA-EE-A2GC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GD                    TCGA-EE-A2GE 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GH                    TCGA-EE-A2GI 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GJ                    TCGA-EE-A2GK 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2GL                    TCGA-EE-A2GM 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GN                    TCGA-EE-A2GO 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GP                    TCGA-EE-A2GR 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2GS                    TCGA-EE-A2GT 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2GU                    TCGA-EE-A2M5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2M6                    TCGA-EE-A2M7 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2M8                    TCGA-EE-A2MC 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MD                    TCGA-EE-A2ME 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MG                    TCGA-EE-A2MH 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MI                    TCGA-EE-A2MJ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MK                    TCGA-EE-A2ML 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MM                    TCGA-EE-A2MN 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MP                    TCGA-EE-A2MQ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A2MR                    TCGA-EE-A2MS 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A2MT                    TCGA-EE-A2MU 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-EE-A3AA                    TCGA-EE-A3AB 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AC                    TCGA-EE-A3AD 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AE                    TCGA-EE-A3AF 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-EE-A3AG                    TCGA-EE-A3AH 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19D                    TCGA-ER-A19F 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19J                    TCGA-ER-A19L 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A19M                    TCGA-ER-A19N 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-ER-A1A1                    TCGA-ER-A3ET 
"DEL PEAK 12(9P21.3) WILD-TYPE" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-ER-A3PL                    TCGA-FR-A3YN 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FR-A44A                    TCGA-FS-A1YW 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1YX                    TCGA-FS-A1YY 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1Z0                    TCGA-FS-A1Z3 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1Z4                    TCGA-FS-A1Z7 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZA                    TCGA-FS-A1ZB 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZC                    TCGA-FS-A1ZD 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZE                    TCGA-FS-A1ZF 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZG                    TCGA-FS-A1ZH 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZJ                    TCGA-FS-A1ZK 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-FS-A1ZM                    TCGA-FS-A1ZP 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-FS-A1ZQ                    TCGA-FS-A1ZR 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZS                    TCGA-FS-A1ZT 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZU                    TCGA-FS-A1ZW 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A1ZY                    TCGA-FS-A1ZZ 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-FS-A4F0                    TCGA-FS-A4F2 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FS-A4F9                    TCGA-FS-A4FC 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FW-A3I3                    TCGA-FW-A3R5 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-FW-A3TU                    TCGA-GN-A261 
  "DEL PEAK 12(9P21.3) MUTATED" "DEL PEAK 12(9P21.3) WILD-TYPE" 
                   TCGA-GN-A262                    TCGA-GN-A264 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A265                    TCGA-GN-A266 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A267                    TCGA-GN-A268 
"DEL PEAK 12(9P21.3) WILD-TYPE"   "DEL PEAK 12(9P21.3) MUTATED" 
                   TCGA-GN-A26A                    TCGA-GN-A26D 
  "DEL PEAK 12(9P21.3) MUTATED"   "DEL PEAK 12(9P21.3) MUTATED" 
[1] "hr=" "1.4"
D36V2, continuous
                               vv
clus                            DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 12(9P21.3) MUTATED                   22             0
  DEL PEAK 12(9P21.3) WILD-TYPE                  3             1
                               vv
clus                            REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 12(9P21.3) MUTATED                                                                                         29
  DEL PEAK 12(9P21.3) WILD-TYPE                                                                                        6
                               vv
clus                            REGIONAL LYMPH NODE
  DEL PEAK 12(9P21.3) MUTATED                    86
  DEL PEAK 12(9P21.3) WILD-TYPE                  26
D36V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 12(9P21.3) MUTATED
  DISTANT METASTASIS                                                                                                22
  PRIMARY TUMOR                                                                                                      0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          29
  REGIONAL LYMPH NODE                                                                                               86
                                                                                          clus
vv                                                                                         DEL PEAK 12(9P21.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   3
  PRIMARY TUMOR                                                                                                        1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             6
  REGIONAL LYMPH NODE                                                                                                 26
D36V4, binary
[1] "tbl2"
                               cls
clus                            [,1] [,2]
  DEL PEAK 12(9P21.3) MUTATED     57   80
  DEL PEAK 12(9P21.3) WILD-TYPE   10   26
        clus
vv       DEL PEAK 12(9P21.3) MUTATED DEL PEAK 12(9P21.3) WILD-TYPE
  FEMALE                          57                            10
  MALE                            80                            26
                               vv
clus                             M0  M1 M1A M1B M1C
  DEL PEAK 12(9P21.3) MUTATED   116   2   1   2   2
  DEL PEAK 12(9P21.3) WILD-TYPE  34   0   1   0   0
D36V5, multiclass
                               vv
clus                            N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 12(9P21.3) MUTATED   74  1   5  14  1   1   8   5 13  2
  DEL PEAK 12(9P21.3) WILD-TYPE 21  1   2   2  0   3   3   0  3  0
D36V6, multiclass
D36V7, continuous
                               vv
clus                            I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 12(9P21.3) MUTATED             4      11        8        9       15
  DEL PEAK 12(9P21.3) WILD-TYPE           0       6        2        5        4
                               vv
clus                            STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 12(9P21.3) MUTATED           7         8         7         8
  DEL PEAK 12(9P21.3) WILD-TYPE         1         2         1         1
                               vv
clus                            STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 12(9P21.3) MUTATED            3         14         18        6
  DEL PEAK 12(9P21.3) WILD-TYPE          3          4          5        0
D36V8, multiclass

Clustering(37) Variable = Del Peak 13(10p15.3) mutation analysis
D37V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 13(10P15.3) MUTATED   38 53
  DEL PEAK 13(10P15.3) WILD-TYPE 45 34
  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                            91                             79 
  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                            53                             34 
$`DEL PEAK 13(10P15.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J6 
       16.57       112.54        71.80       121.22        28.08        43.40 
TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV 
       11.87        12.10        60.23        24.53         9.30        21.47 
TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 
        3.22        36.03       117.17       194.83       176.55        35.93 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A3F5 TCGA-EE-A17Z 
      107.34        61.18        53.92        65.92       215.44         8.65 
TCGA-EE-A181 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29H TCGA-EE-A29L 
       33.73         4.93       109.64       168.26        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29T 
       44.35        18.58        56.42        37.35        55.89       345.96 
TCGA-EE-A29X TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GE TCGA-EE-A2GI 
       17.92        24.43        39.25        47.54       135.91        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR 
       89.33        75.48        90.94       101.95        13.87        14.30 
TCGA-EE-A2GS TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MG TCGA-EE-A2MH 
       55.59       129.24        28.80        19.76       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA 
      204.62       144.76       167.87       136.44        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19L 
      122.73         3.68        26.73       138.77        12.59       131.08 
TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       80.32        33.21        80.48        48.59       202.62        20.91 
TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZG 
        7.76        27.68       357.37        53.52        15.45         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZU 
       32.71        47.38       101.26       133.55        11.41        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
       49.48        27.06       117.93        10.09        64.41        62.76 
TCGA-GN-A26A 
       32.48 

$`DEL PEAK 13(10P15.3) WILD-TYPE`
TCGA-D3-A1Q9 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JF TCGA-D3-A3C6 TCGA-D3-A3CC 
       31.59        65.49        23.77        48.76        58.03        71.24 
TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HV 
      148.31        49.74         2.70         6.38        11.34        48.89 
TCGA-DA-A1I0 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 
       20.38        23.44        68.09        28.60        10.49        15.68 
TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29C 
       29.82        14.70        26.86        78.87        63.32        47.84 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29R TCGA-EE-A29V TCGA-EE-A2A0 TCGA-EE-A2A1 
       13.97        39.62        14.47        25.87        46.82        78.94 
TCGA-EE-A2A6 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GH TCGA-EE-A2GK TCGA-EE-A2GL 
       58.75        43.23       314.53       182.01        54.71        55.00 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
       19.56        67.13        21.67        61.51        47.28       103.27 
TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR 
       96.23       203.01        47.54       248.61        43.23       103.56 
TCGA-EE-A2MT TCGA-EE-A3AC TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19F TCGA-ER-A19J 
       41.59        25.84        13.81        23.47        26.37         6.41 
TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YY 
       61.05        44.05        79.99       160.60       216.92       228.59 
TCGA-FS-A1Z4 TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZS 
       28.08        48.85        40.27        23.93        74.73       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       53.16        27.02        77.79        50.14        12.43        49.45 
TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 
        0.20        22.98        47.54        76.41       120.46        84.72 
TCGA-GN-A26D 
       39.58 

  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                          2.56                           0.20 
  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                        357.37                         314.53 
  DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE 
                         47.54                          47.54 
[1] "2.6 - 357.4 (47.5)" "0.2 - 314.5 (47.5)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
"DEL PEAK 13(10P15.3) WILD-TYPE" "DEL PEAK 13(10P15.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 13(10P15.3) WILD-TYPE"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 13(10P15.3) MUTATED"   "DEL PEAK 13(10P15.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 13(10P15.3) MUTATED" "DEL PEAK 13(10P15.3) WILD-TYPE" 
[1] "hr=" "1.3"
D37V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 13(10P15.3) MUTATED                   12             1
  DEL PEAK 13(10P15.3) WILD-TYPE                 13             0
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 13(10P15.3) MUTATED                                                                                         24
  DEL PEAK 13(10P15.3) WILD-TYPE                                                                                       11
                                vv
clus                             REGIONAL LYMPH NODE
  DEL PEAK 13(10P15.3) MUTATED                    55
  DEL PEAK 13(10P15.3) WILD-TYPE                  57
D37V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 13(10P15.3) MUTATED
  DISTANT METASTASIS                                                                                                 12
  PRIMARY TUMOR                                                                                                       1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           24
  REGIONAL LYMPH NODE                                                                                                55
                                                                                          clus
vv                                                                                         DEL PEAK 13(10P15.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   13
  PRIMARY TUMOR                                                                                                         0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             11
  REGIONAL LYMPH NODE                                                                                                  57
D37V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 13(10P15.3) MUTATED     39   53
  DEL PEAK 13(10P15.3) WILD-TYPE   28   53
        clus
vv       DEL PEAK 13(10P15.3) MUTATED DEL PEAK 13(10P15.3) WILD-TYPE
  FEMALE                           39                             28
  MALE                             53                             53
                                vv
clus                             M0 M1 M1A M1B M1C
  DEL PEAK 13(10P15.3) MUTATED   81  0   1   1   2
  DEL PEAK 13(10P15.3) WILD-TYPE 69  2   1   1   0
D37V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 13(10P15.3) MUTATED   50  1   6   8  0   1   5   4  9  1
  DEL PEAK 13(10P15.3) WILD-TYPE 45  1   1   8  1   3   6   1  7  1
D37V6, multiclass
D37V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 13(10P15.3) MUTATED             4       7        6        7       10
  DEL PEAK 13(10P15.3) WILD-TYPE           0      10        4        7        9
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 13(10P15.3) MUTATED           3         6         4         5
  DEL PEAK 13(10P15.3) WILD-TYPE         5         4         4         4
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 13(10P15.3) MUTATED            4         10         13        4
  DEL PEAK 13(10P15.3) WILD-TYPE          2          8         10        2
D37V8, multiclass

Clustering(38) Variable = Del Peak 14(10q23.31) mutation analysis
D38V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 14(10Q23.31) MUTATED   50 55
  DEL PEAK 14(10Q23.31) WILD-TYPE 33 32
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                            105                              65 
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                             55                              32 
$`DEL PEAK 14(10Q23.31) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 
       16.57       112.54        71.80       121.22        28.08        31.59 
TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3CF 
       11.87        12.10        58.03        71.24        60.23        24.53 
TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JX TCGA-D9-A3Z3 
        9.30        21.47       148.31        49.74         6.38         3.22 
TCGA-DA-A1HW TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
       36.03       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 
       53.92        65.92       215.44        15.68         8.65        33.73 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A29H 
        4.93       109.64        78.87       168.26        13.97        32.19 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29T TCGA-EE-A29X 
        2.56        44.35        56.42        37.35       345.96        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       46.82        24.43        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GM TCGA-EE-A2GN 
      314.53       135.91        22.55        89.33        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M6 
      101.95        13.87        14.30        55.59        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI 
       28.80        19.76        47.28       103.17        16.96       204.62 
TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MP TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AB 
      144.76       167.87       248.61        53.26         4.24       122.73 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19L TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YY TCGA-FS-A1Z0 
      131.08        33.21        80.48       160.60       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZF 
       20.91         7.76        27.68       357.37        53.52        15.45 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZU 
       32.71        47.38       101.26       133.55        11.41        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A264 
       49.48        27.06         0.20        47.54       120.46       117.93 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A 
       10.09        64.41        32.48 

$`DEL PEAK 14(10Q23.31) WILD-TYPE`
TCGA-D3-A2J6 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JF TCGA-D9-A1JW TCGA-D9-A3Z1 
       43.40        65.49        23.77        48.76         2.70        11.34 
TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
       48.89       117.17        20.38        23.44        68.09        28.60 
TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A29A TCGA-EE-A29C 
       10.49        29.82        14.70        26.86        63.32        47.84 
TCGA-EE-A29E TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A2A1 
       39.62        18.58        14.47        55.89        25.87        78.94 
TCGA-EE-A2GH TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2MC 
      182.01        54.71        55.00        19.56        21.67        61.51 
TCGA-EE-A2ME TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR 
      103.27        96.23       203.01        47.54        43.23       103.56 
TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AC TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19M 
      136.44        41.59        25.84        26.37         6.41        61.05 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1Z4 
       44.05        79.99        80.32       216.92        48.59        28.08 
TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZS 
       48.85        40.27         9.70        23.93        74.73       148.77 
TCGA-FS-A1ZT TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       53.16        27.02        77.79        50.14        12.43        49.45 
TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26D 
       22.98        76.41        84.72        62.76        39.58 

  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                            0.2                             2.7 
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                         357.37                          216.92 
  DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE 
                          47.54                           47.84 
[1] "0.2 - 357.4 (47.5)" "2.7 - 216.9 (47.8)"
                     TCGA-D3-A1Q1                      TCGA-D3-A1Q5 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A1Q6                      TCGA-D3-A1Q7 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A1Q8                      TCGA-D3-A1Q9 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A2J6                      TCGA-D3-A2J8 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D3-A2J9                      TCGA-D3-A2JD 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A2JF                      TCGA-D3-A2JK 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3C6                      TCGA-D3-A3CC 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3CE                      TCGA-D3-A3CF 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3MO                      TCGA-D3-A3MV 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D9-A148                      TCGA-D9-A149 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D9-A1JW                      TCGA-D9-A1JX 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D9-A3Z1                      TCGA-D9-A3Z3 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1HV                      TCGA-DA-A1HW 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1HY                      TCGA-DA-A1I0 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A1I1                      TCGA-DA-A1I2 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I4                      TCGA-DA-A1I5 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I7                      TCGA-DA-A1I8 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1IA                      TCGA-DA-A1IB 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A1IC                      TCGA-DA-A3F2 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A3F3                      TCGA-DA-A3F5 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A3F8                      TCGA-EE-A17X 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A17Z                      TCGA-EE-A181 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A182                      TCGA-EE-A183 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A185                      TCGA-EE-A20B 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A20F                      TCGA-EE-A20H 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29A                      TCGA-EE-A29C 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29D                      TCGA-EE-A29E 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29H                      TCGA-EE-A29L 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29M                      TCGA-EE-A29N 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29P                      TCGA-EE-A29Q 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29R                      TCGA-EE-A29S 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29T                      TCGA-EE-A29V 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29X                      TCGA-EE-A2A0 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2A1                      TCGA-EE-A2A2 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2A5                      TCGA-EE-A2A6 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GB                      TCGA-EE-A2GC 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GD                      TCGA-EE-A2GE 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GH                      TCGA-EE-A2GI 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GJ                      TCGA-EE-A2GK 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2GL                      TCGA-EE-A2GM 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GN                      TCGA-EE-A2GO 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GP                      TCGA-EE-A2GR 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GS                      TCGA-EE-A2GT 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2GU                      TCGA-EE-A2M5 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2M6                      TCGA-EE-A2M7 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2M8                      TCGA-EE-A2MC 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MD                      TCGA-EE-A2ME 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MG                      TCGA-EE-A2MH 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MI                      TCGA-EE-A2MJ 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MK                      TCGA-EE-A2ML 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MM                      TCGA-EE-A2MN 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MP                      TCGA-EE-A2MQ 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MR                      TCGA-EE-A2MS 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MT                      TCGA-EE-A2MU 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AA                      TCGA-EE-A3AB 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AC                      TCGA-EE-A3AD 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AE                      TCGA-EE-A3AF 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AG                      TCGA-EE-A3AH 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-ER-A19D                      TCGA-ER-A19F 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A19J                      TCGA-ER-A19L 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-ER-A19M                      TCGA-ER-A19N 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A1A1                      TCGA-ER-A3ET 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A3PL                      TCGA-FR-A3YN 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FR-A44A                      TCGA-FS-A1YW 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZC                      TCGA-FS-A1ZD 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZE                      TCGA-FS-A1ZF 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZG                      TCGA-FS-A1ZH 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZJ                      TCGA-FS-A1ZK 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZM                      TCGA-FS-A1ZP 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZQ                      TCGA-FS-A1ZR 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-GN-A265                      TCGA-GN-A266 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D3-A1Q1                      TCGA-D3-A1Q5 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A1Q6                      TCGA-D3-A1Q7 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A1Q8                      TCGA-D3-A1Q9 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A2J6                      TCGA-D3-A2J8 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D3-A2J9                      TCGA-D3-A2JD 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A2JF                      TCGA-D3-A2JK 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3C6                      TCGA-D3-A3CC 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3CE                      TCGA-D3-A3CF 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3MO                      TCGA-D3-A3MV 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D9-A148                      TCGA-D9-A149 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D9-A1JW                      TCGA-D9-A1JX 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D9-A3Z1                      TCGA-D9-A3Z3 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1HV                      TCGA-DA-A1HW 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1HY                      TCGA-DA-A1I0 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A1I1                      TCGA-DA-A1I2 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I4                      TCGA-DA-A1I5 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I7                      TCGA-DA-A1I8 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1IA                      TCGA-DA-A1IB 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A1IC                      TCGA-DA-A3F2 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A3F3                      TCGA-DA-A3F5 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A3F8                      TCGA-EE-A17X 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A17Z                      TCGA-EE-A181 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A182                      TCGA-EE-A183 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A185                      TCGA-EE-A20B 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A20F                      TCGA-EE-A20H 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29A                      TCGA-EE-A29C 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29D                      TCGA-EE-A29E 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29H                      TCGA-EE-A29L 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29M                      TCGA-EE-A29N 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29P                      TCGA-EE-A29Q 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29R                      TCGA-EE-A29S 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29T                      TCGA-EE-A29V 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29X                      TCGA-EE-A2A0 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2A1                      TCGA-EE-A2A2 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2A5                      TCGA-EE-A2A6 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GB                      TCGA-EE-A2GC 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GD                      TCGA-EE-A2GE 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GH                      TCGA-EE-A2GI 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GJ                      TCGA-EE-A2GK 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2GL                      TCGA-EE-A2GM 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GN                      TCGA-EE-A2GO 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GP                      TCGA-EE-A2GR 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GS                      TCGA-EE-A2GT 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2GU                      TCGA-EE-A2M5 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2M6                      TCGA-EE-A2M7 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2M8                      TCGA-EE-A2MC 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MD                      TCGA-EE-A2ME 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MG                      TCGA-EE-A2MH 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MI                      TCGA-EE-A2MJ 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MK                      TCGA-EE-A2ML 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MM                      TCGA-EE-A2MN 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MP                      TCGA-EE-A2MQ 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MR                      TCGA-EE-A2MS 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MT                      TCGA-EE-A2MU 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AA                      TCGA-EE-A3AB 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AC                      TCGA-EE-A3AD 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AE                      TCGA-EE-A3AF 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AG                      TCGA-EE-A3AH 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-ER-A19D                      TCGA-ER-A19F 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A19J                      TCGA-ER-A19L 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-ER-A19M                      TCGA-ER-A19N 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A1A1                      TCGA-ER-A3ET 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A3PL                      TCGA-FR-A3YN 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FR-A44A                      TCGA-FS-A1YW 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZC                      TCGA-FS-A1ZD 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZE                      TCGA-FS-A1ZF 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZG                      TCGA-FS-A1ZH 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZJ                      TCGA-FS-A1ZK 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZM                      TCGA-FS-A1ZP 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZQ                      TCGA-FS-A1ZR 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-GN-A265                      TCGA-GN-A266 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D3-A1Q1                      TCGA-D3-A1Q5 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A1Q6                      TCGA-D3-A1Q7 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A1Q8                      TCGA-D3-A1Q9 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A2J6                      TCGA-D3-A2J8 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-D3-A2J9                      TCGA-D3-A2JD 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A2JF                      TCGA-D3-A2JK 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3C6                      TCGA-D3-A3CC 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3CE                      TCGA-D3-A3CF 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D3-A3MO                      TCGA-D3-A3MV 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D9-A148                      TCGA-D9-A149 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D9-A1JW                      TCGA-D9-A1JX 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-D9-A3Z1                      TCGA-D9-A3Z3 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1HV                      TCGA-DA-A1HW 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1HY                      TCGA-DA-A1I0 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A1I1                      TCGA-DA-A1I2 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I4                      TCGA-DA-A1I5 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1I7                      TCGA-DA-A1I8 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A1IA                      TCGA-DA-A1IB 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A1IC                      TCGA-DA-A3F2 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-DA-A3F3                      TCGA-DA-A3F5 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-DA-A3F8                      TCGA-EE-A17X 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A17Z                      TCGA-EE-A181 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A182                      TCGA-EE-A183 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A185                      TCGA-EE-A20B 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A20F                      TCGA-EE-A20H 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29A                      TCGA-EE-A29C 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29D                      TCGA-EE-A29E 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29H                      TCGA-EE-A29L 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29M                      TCGA-EE-A29N 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29P                      TCGA-EE-A29Q 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A29R                      TCGA-EE-A29S 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29T                      TCGA-EE-A29V 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A29X                      TCGA-EE-A2A0 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2A1                      TCGA-EE-A2A2 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2A5                      TCGA-EE-A2A6 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GB                      TCGA-EE-A2GC 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GD                      TCGA-EE-A2GE 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GH                      TCGA-EE-A2GI 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GJ                      TCGA-EE-A2GK 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2GL                      TCGA-EE-A2GM 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GN                      TCGA-EE-A2GO 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GP                      TCGA-EE-A2GR 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2GS                      TCGA-EE-A2GT 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2GU                      TCGA-EE-A2M5 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2M6                      TCGA-EE-A2M7 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2M8                      TCGA-EE-A2MC 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MD                      TCGA-EE-A2ME 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MG                      TCGA-EE-A2MH 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A2MI                      TCGA-EE-A2MJ 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MK                      TCGA-EE-A2ML 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MM                      TCGA-EE-A2MN 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MP                      TCGA-EE-A2MQ 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MR                      TCGA-EE-A2MS 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-EE-A2MT                      TCGA-EE-A2MU 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AA                      TCGA-EE-A3AB 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AC                      TCGA-EE-A3AD 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AE                      TCGA-EE-A3AF 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-EE-A3AG                      TCGA-EE-A3AH 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-ER-A19D                      TCGA-ER-A19F 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A19J                      TCGA-ER-A19L 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-ER-A19M                      TCGA-ER-A19N 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A1A1                      TCGA-ER-A3ET 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-ER-A3PL                      TCGA-FR-A3YN 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FR-A44A                      TCGA-FS-A1YW 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZC                      TCGA-FS-A1ZD 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZE                      TCGA-FS-A1ZF 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZG                      TCGA-FS-A1ZH 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZJ                      TCGA-FS-A1ZK 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZM                      TCGA-FS-A1ZP 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZQ                      TCGA-FS-A1ZR 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
"DEL PEAK 14(10Q23.31) WILD-TYPE" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
  "DEL PEAK 14(10Q23.31) MUTATED"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-GN-A265                      TCGA-GN-A266 
"DEL PEAK 14(10Q23.31) WILD-TYPE"   "DEL PEAK 14(10Q23.31) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
  "DEL PEAK 14(10Q23.31) MUTATED" "DEL PEAK 14(10Q23.31) WILD-TYPE" 
[1] "hr=" "1.1"
D38V2, continuous
                                 vv
clus                              DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 14(10Q23.31) MUTATED                   15             1
  DEL PEAK 14(10Q23.31) WILD-TYPE                 10             0
                                 vv
clus                              REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 14(10Q23.31) MUTATED                                                                                         27
  DEL PEAK 14(10Q23.31) WILD-TYPE                                                                                        8
                                 vv
clus                              REGIONAL LYMPH NODE
  DEL PEAK 14(10Q23.31) MUTATED                    64
  DEL PEAK 14(10Q23.31) WILD-TYPE                  48
D38V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 14(10Q23.31) MUTATED
  DISTANT METASTASIS                                                                                                  15
  PRIMARY TUMOR                                                                                                        1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            27
  REGIONAL LYMPH NODE                                                                                                 64
                                                                                          clus
vv                                                                                         DEL PEAK 14(10Q23.31) WILD-TYPE
  DISTANT METASTASIS                                                                                                    10
  PRIMARY TUMOR                                                                                                          0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                               8
  REGIONAL LYMPH NODE                                                                                                   48
D38V4, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 14(10Q23.31) MUTATED     50   57
  DEL PEAK 14(10Q23.31) WILD-TYPE   17   49
        clus
vv       DEL PEAK 14(10Q23.31) MUTATED DEL PEAK 14(10Q23.31) WILD-TYPE
  FEMALE                            50                              17
  MALE                              57                              49
                                 vv
clus                              M0 M1 M1A M1B M1C
  DEL PEAK 14(10Q23.31) MUTATED   90  1   1   2   2
  DEL PEAK 14(10Q23.31) WILD-TYPE 60  1   1   0   0
D38V5, multiclass
                                 vv
clus                              N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 14(10Q23.31) MUTATED   57  1   5  10  0   2   6   4  9  2
  DEL PEAK 14(10Q23.31) WILD-TYPE 38  1   2   6  1   2   5   1  7  0
D38V6, multiclass
D38V7, continuous
                                 vv
clus                              I OR II NOS STAGE I STAGE IA STAGE IB
  DEL PEAK 14(10Q23.31) MUTATED             4       7        8        8
  DEL PEAK 14(10Q23.31) WILD-TYPE           0      10        2        6
                                 vv
clus                              STAGE II STAGE IIA STAGE IIB STAGE IIC
  DEL PEAK 14(10Q23.31) MUTATED         12         4         6         5
  DEL PEAK 14(10Q23.31) WILD-TYPE        7         4         4         3
                                 vv
clus                              STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  DEL PEAK 14(10Q23.31) MUTATED           6          3         12         12
  DEL PEAK 14(10Q23.31) WILD-TYPE         3          3          6         11
                                 vv
clus                              STAGE IV
  DEL PEAK 14(10Q23.31) MUTATED          5
  DEL PEAK 14(10Q23.31) WILD-TYPE        1
D38V8, multiclass

Clustering(39) Variable = Del Peak 15(10q26.3) mutation analysis
D39V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 15(10Q26.3) MUTATED   50 55
  DEL PEAK 15(10Q26.3) WILD-TYPE 33 32
  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                           105                             65 
  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                            55                             32 
$`DEL PEAK 15(10Q26.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 
       16.57       112.54        71.80       121.22        28.08        31.59 
TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3CF 
       11.87        12.10        58.03        71.24        60.23        24.53 
TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A3Z3 TCGA-DA-A1HW 
        9.30        21.47       148.31        49.74         3.22        36.03 
TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
      117.17       194.83       176.55        35.93       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 
       53.92        65.92       215.44        15.68         8.65        33.73 
TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29D TCGA-EE-A29H 
        4.93       109.64        78.87       168.26        13.97        32.19 
TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 
       44.35        56.42        37.35       345.96        17.92        46.82 
TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       24.43        39.25        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
      135.91        22.55        89.33        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 
       13.87        14.30        55.59        67.13        21.67       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       28.80        19.76        47.28       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MP TCGA-EE-A2MU TCGA-EE-A3AA 
      204.62       144.76       167.87       248.61        53.26         4.24 
TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
      122.73         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19L TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A 
       12.59       131.08        80.32        33.21        80.48       160.60 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
       48.59       228.59       202.62        20.91         7.76        27.68 
TCGA-FS-A1ZC TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A1ZQ 
      357.37        15.45        32.71        47.38       101.26       133.55 
TCGA-FS-A1ZR TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FW-A3TU TCGA-GN-A262 
       11.41        26.56        49.48        27.06        47.54       120.46 
TCGA-GN-A264 TCGA-GN-A266 TCGA-GN-A26A 
      117.93        10.09        32.48 

$`DEL PEAK 15(10Q26.3) WILD-TYPE`
TCGA-D3-A2J6 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JF TCGA-D9-A1JW TCGA-D9-A1JX 
       43.40        65.49        23.77        48.76         2.70         6.38 
TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1I0 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
       11.34        48.89        20.38        23.44        68.09        28.60 
TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A29A TCGA-EE-A29C 
       10.49        29.82        14.70        26.86        63.32        47.84 
TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29V 
       39.62         2.56        18.58        14.47        55.89        25.87 
TCGA-EE-A2A1 TCGA-EE-A2GH TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GT TCGA-EE-A2MC 
       78.94       182.01        54.71        55.00        19.56        61.51 
TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS 
       96.23       203.01        47.54        43.23       103.56       136.44 
TCGA-EE-A2MT TCGA-EE-A3AC TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19M TCGA-ER-A19N 
       41.59        25.84        26.37         6.41        61.05        44.05 
TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1Z4 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZE 
       79.99       216.92        28.08        48.85        53.52        40.27 
TCGA-FS-A1ZG TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZZ 
        9.70        23.93        74.73       148.77        53.16        27.02 
TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 
       77.79        50.14        12.43        49.45         0.20        22.98 
TCGA-GN-A261 TCGA-GN-A265 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26D 
       76.41        84.72        64.41        62.76        39.58 

  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                          3.22                           0.20 
  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                        357.37                         216.92 
  DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE 
                         48.59                          44.05 
[1] "3.2 - 357.4 (48.6)" "0.2 - 216.9 (44.0)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 15(10Q26.3) MUTATED"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 15(10Q26.3) WILD-TYPE"   "DEL PEAK 15(10Q26.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK 15(10Q26.3) WILD-TYPE" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 15(10Q26.3) MUTATED" "DEL PEAK 15(10Q26.3) WILD-TYPE" 
[1] "hr=" "1.2"
D39V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 15(10Q26.3) MUTATED                   14             1
  DEL PEAK 15(10Q26.3) WILD-TYPE                 11             0
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 15(10Q26.3) MUTATED                                                                                         29
  DEL PEAK 15(10Q26.3) WILD-TYPE                                                                                        6
                                vv
clus                             REGIONAL LYMPH NODE
  DEL PEAK 15(10Q26.3) MUTATED                    63
  DEL PEAK 15(10Q26.3) WILD-TYPE                  49
D39V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 15(10Q26.3) MUTATED
  DISTANT METASTASIS                                                                                                 14
  PRIMARY TUMOR                                                                                                       1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           29
  REGIONAL LYMPH NODE                                                                                                63
                                                                                          clus
vv                                                                                         DEL PEAK 15(10Q26.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   11
  PRIMARY TUMOR                                                                                                         0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                              6
  REGIONAL LYMPH NODE                                                                                                  49
D39V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 15(10Q26.3) MUTATED     50   57
  DEL PEAK 15(10Q26.3) WILD-TYPE   17   49
        clus
vv       DEL PEAK 15(10Q26.3) MUTATED DEL PEAK 15(10Q26.3) WILD-TYPE
  FEMALE                           50                             17
  MALE                             57                             49
                                vv
clus                             M0 M1 M1A M1B M1C
  DEL PEAK 15(10Q26.3) MUTATED   91  0   1   2   2
  DEL PEAK 15(10Q26.3) WILD-TYPE 59  2   1   0   0
D39V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 15(10Q26.3) MUTATED   58  1   5  10  0   2   6   4  9  1
  DEL PEAK 15(10Q26.3) WILD-TYPE 37  1   2   6  1   2   5   1  7  1
D39V6, multiclass
D39V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 15(10Q26.3) MUTATED             4      10        8        8       12
  DEL PEAK 15(10Q26.3) WILD-TYPE           0       7        2        6        7
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 15(10Q26.3) MUTATED           3         6         5         6
  DEL PEAK 15(10Q26.3) WILD-TYPE         5         4         3         3
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 15(10Q26.3) MUTATED            3         12         12        4
  DEL PEAK 15(10Q26.3) WILD-TYPE          3          6         11        2
D39V8, multiclass

Clustering(40) Variable = Del Peak 16(11q23.3) mutation analysis
D40V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 16(11Q23.3) MUTATED   54 46
  DEL PEAK 16(11Q23.3) WILD-TYPE 29 41
  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                           100                             70 
  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                            46                             41 
$`DEL PEAK 16(11Q23.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q7 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2JD 
       16.57       112.54       121.22        31.59        43.40        11.87 
TCGA-D3-A2JF TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV 
       48.76        58.03        71.24        24.53         9.30        21.47 
TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z3 TCGA-DA-A1HV 
      148.31        49.74         2.70         6.38         3.22        48.89 
TCGA-DA-A1HW TCGA-DA-A1I1 TCGA-DA-A1I5 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A3F3 
       36.03       194.83       107.34        53.92        65.92        10.49 
TCGA-DA-A3F5 TCGA-EE-A182 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
      215.44        14.70       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       47.84        13.97        32.19         2.56        44.35        18.58 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A2 
       37.35        14.47        55.89       345.96        25.87        24.43 
TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ 
       39.25        47.54        43.23       135.91        22.55        89.33 
TCGA-EE-A2GM TCGA-EE-A2GR TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2MC TCGA-EE-A2MD 
       75.48        14.30        67.13       129.24        61.51        47.28 
TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MS 
       96.23       203.01       167.87        47.54       248.61       136.44 
TCGA-EE-A2MT TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AG 
       41.59        53.26       122.73         3.68        26.73        23.47 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A3ET 
       12.59        26.37       131.08        61.05        44.05        80.32 
TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 
       33.21        80.48       160.60       202.62        20.91         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZJ 
       27.68        48.85        40.27        15.45        32.71        47.38 
TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
      101.26       133.55        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A266 
       27.02         0.20        47.54       120.46       117.93        10.09 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A TCGA-GN-A26D 
       64.41        62.76        32.48        39.58 

$`DEL PEAK 16(11Q23.3) WILD-TYPE`
TCGA-D3-A1Q6 TCGA-D3-A1Q8 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JK TCGA-D3-A3CE 
       71.80        28.08        65.49        23.77        12.10        60.23 
TCGA-D9-A3Z1 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I7 
       11.34       117.17        20.38       176.55        35.93        61.18 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z 
       23.44        68.09        28.60        15.68        29.82         8.65 
TCGA-EE-A181 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A29E TCGA-EE-A29P TCGA-EE-A29X 
       33.73        26.86         4.93        39.62        56.42        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A6 TCGA-EE-A2GD TCGA-EE-A2GH TCGA-EE-A2GK 
       46.82        78.94        58.75       314.53       182.01        54.71 
TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GS TCGA-EE-A2GT 
       55.00        90.94       101.95        13.87        55.59        19.56 
TCGA-EE-A2M5 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       21.67        28.80        19.76       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A3AA TCGA-EE-A3AC 
      204.62       144.76        43.23       103.56         4.24        25.84 
TCGA-EE-A3AF TCGA-EE-A3AH TCGA-ER-A19J TCGA-ER-A1A1 TCGA-FS-A1YW TCGA-FS-A1YX 
       13.81       138.77         6.41        79.99       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z4 TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZG TCGA-FS-A1ZK 
      228.59        28.08       357.37        53.52         9.70        23.93 
TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 
       74.73        11.41       148.77        77.79        50.14        12.43 
TCGA-FS-A4FC TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A265 
       49.45        22.98        76.41        84.72 

  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                          0.20                           4.24 
  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                        345.96                         357.37 
  DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE 
                         47.54                          49.02 
[1] "0.2 - 346.0 (47.5)" "4.2 - 357.4 (49.0)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 16(11Q23.3) WILD-TYPE" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 16(11Q23.3) MUTATED" "DEL PEAK 16(11Q23.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 16(11Q23.3) WILD-TYPE"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 16(11Q23.3) MUTATED"   "DEL PEAK 16(11Q23.3) MUTATED" 
[1] "hr=" "1.2"
D40V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 16(11Q23.3) MUTATED                   20             1
  DEL PEAK 16(11Q23.3) WILD-TYPE                  5             0
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 16(11Q23.3) MUTATED                                                                                         20
  DEL PEAK 16(11Q23.3) WILD-TYPE                                                                                       15
                                vv
clus                             REGIONAL LYMPH NODE
  DEL PEAK 16(11Q23.3) MUTATED                    60
  DEL PEAK 16(11Q23.3) WILD-TYPE                  52
D40V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 16(11Q23.3) MUTATED
  DISTANT METASTASIS                                                                                                 20
  PRIMARY TUMOR                                                                                                       1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           20
  REGIONAL LYMPH NODE                                                                                                60
                                                                                          clus
vv                                                                                         DEL PEAK 16(11Q23.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                    5
  PRIMARY TUMOR                                                                                                         0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             15
  REGIONAL LYMPH NODE                                                                                                  52
D40V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 16(11Q23.3) MUTATED     42   59
  DEL PEAK 16(11Q23.3) WILD-TYPE   25   47
        clus
vv       DEL PEAK 16(11Q23.3) MUTATED DEL PEAK 16(11Q23.3) WILD-TYPE
  FEMALE                           42                             25
  MALE                             59                             47
                                vv
clus                             M0 M1 M1A M1B M1C
  DEL PEAK 16(11Q23.3) MUTATED   85  1   1   1   2
  DEL PEAK 16(11Q23.3) WILD-TYPE 65  1   1   1   0
D40V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 16(11Q23.3) MUTATED   54  0   6  13  0   3   2   4  7  2
  DEL PEAK 16(11Q23.3) WILD-TYPE 41  2   1   3  1   1   9   1  9  0
D40V6, multiclass
D40V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 16(11Q23.3) MUTATED             2       8        8        9        9
  DEL PEAK 16(11Q23.3) WILD-TYPE           2       9        2        5       10
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 16(11Q23.3) MUTATED           1         6         6         3
  DEL PEAK 16(11Q23.3) WILD-TYPE         7         4         2         6
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 16(11Q23.3) MUTATED            5         11         12        4
  DEL PEAK 16(11Q23.3) WILD-TYPE          1          7         11        2
D40V8, multiclass

Clustering(41) Variable = Del Peak 17(12p13.31) mutation analysis
D41V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 17(12P13.31) MUTATED   13 10
  DEL PEAK 17(12P13.31) WILD-TYPE 70 77
  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                             23                             147 
  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                             10                              77 
$`DEL PEAK 17(12P13.31) MUTATED`
TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-DA-A1HV TCGA-DA-A1I1 TCGA-EE-A20B TCGA-EE-A29Q 
       31.59        43.40        48.89       194.83       109.64        37.35 
TCGA-EE-A29V TCGA-EE-A2A2 TCGA-EE-A2GP TCGA-EE-A2MG TCGA-EE-A2MK TCGA-EE-A2MM 
       25.87        24.43        13.87       103.17       144.76       167.87 
TCGA-EE-A2MP TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AE TCGA-FS-A1Z4 TCGA-FS-A1ZA 
      248.61       136.44        53.26        26.73        28.08        27.68 
TCGA-FS-A1ZH TCGA-FS-A1ZT TCGA-FW-A3R5 TCGA-GN-A266 TCGA-GN-A26D 
       32.71        53.16        22.98        10.09        39.58 

$`DEL PEAK 17(12P13.31) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J8 
       16.57       112.54        71.80       121.22        28.08        65.49 
TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC 
       23.77        11.87        48.76        12.10        58.03        71.24 
TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 
       60.23        24.53         9.30        21.47       148.31        49.74 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1HY 
        2.70         6.38        11.34         3.22        36.03       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 
       20.38       176.55        35.93       107.34        61.18        53.92 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 
       15.68        29.82         8.65        33.73        14.70        26.86 
TCGA-EE-A185 TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
        4.93        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P 
       39.62        32.19         2.56        44.35        18.58        56.42 
TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 
       14.47        55.89       345.96        17.92        46.82        78.94 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE 
       39.25        58.75        47.54        43.23       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      182.01        22.55        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU 
       90.94       101.95        14.30        55.59        19.56        67.13 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MN 
      103.27        16.96       204.62        96.23       203.01        47.54 
TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AA TCGA-EE-A3AB TCGA-EE-A3AC 
       43.23       103.56        41.59         4.24       122.73        25.84 
TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
        3.68        13.81        23.47       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
        6.41       131.08        61.05        44.05        79.99        80.32 
TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY 
       33.21        80.48       160.60       216.92        48.59       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD 
      202.62        20.91         7.76        48.85       357.37        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM 
       40.27        15.45         9.70        47.38        23.93       101.26 
TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZW 
       74.73       133.55        11.41       148.77        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       27.06        27.02        77.79        50.14        12.43        49.45 
TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 
        0.20        47.54        76.41       120.46       117.93        84.72 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
       64.41        62.76        32.48 

  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                          10.09                            0.20 
  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                         248.61                          357.37 
  DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE 
                          39.58                           47.84 
[1] "10.1 - 248.6 (39.6)" "0.2 - 357.4 (47.8)" 
                     TCGA-D3-A1Q1                      TCGA-D3-A1Q5 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A1Q6                      TCGA-D3-A1Q7 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A1Q8                      TCGA-D3-A1Q9 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-D3-A2J6                      TCGA-D3-A2J8 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A2J9                      TCGA-D3-A2JD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A2JF                      TCGA-D3-A2JK 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3C6                      TCGA-D3-A3CC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3CE                      TCGA-D3-A3CF 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3MO                      TCGA-D3-A3MV 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A148                      TCGA-D9-A149 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A1JW                      TCGA-D9-A1JX 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A3Z1                      TCGA-D9-A3Z3 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1HV                      TCGA-DA-A1HW 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1HY                      TCGA-DA-A1I0 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I1                      TCGA-DA-A1I2 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I4                      TCGA-DA-A1I5 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I7                      TCGA-DA-A1I8 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1IA                      TCGA-DA-A1IB 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1IC                      TCGA-DA-A3F2 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A3F3                      TCGA-DA-A3F5 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A3F8                      TCGA-EE-A17X 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A17Z                      TCGA-EE-A181 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A182                      TCGA-EE-A183 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A185                      TCGA-EE-A20B 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A20F                      TCGA-EE-A20H 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29A                      TCGA-EE-A29C 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29D                      TCGA-EE-A29E 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29H                      TCGA-EE-A29L 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29M                      TCGA-EE-A29N 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29P                      TCGA-EE-A29Q 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A29R                      TCGA-EE-A29S 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29T                      TCGA-EE-A29V 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A29X                      TCGA-EE-A2A0 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2A1                      TCGA-EE-A2A2 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2A5                      TCGA-EE-A2A6 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GB                      TCGA-EE-A2GC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GD                      TCGA-EE-A2GE 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GH                      TCGA-EE-A2GI 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GJ                      TCGA-EE-A2GK 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GL                      TCGA-EE-A2GM 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GN                      TCGA-EE-A2GO 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GP                      TCGA-EE-A2GR 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GS                      TCGA-EE-A2GT 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GU                      TCGA-EE-A2M5 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2M6                      TCGA-EE-A2M7 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2M8                      TCGA-EE-A2MC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MD                      TCGA-EE-A2ME 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MG                      TCGA-EE-A2MH 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MI                      TCGA-EE-A2MJ 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MK                      TCGA-EE-A2ML 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MM                      TCGA-EE-A2MN 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MP                      TCGA-EE-A2MQ 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MR                      TCGA-EE-A2MS 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2MT                      TCGA-EE-A2MU 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A3AA                      TCGA-EE-A3AB 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AC                      TCGA-EE-A3AD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AE                      TCGA-EE-A3AF 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AG                      TCGA-EE-A3AH 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19D                      TCGA-ER-A19F 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19J                      TCGA-ER-A19L 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19M                      TCGA-ER-A19N 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A1A1                      TCGA-ER-A3ET 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A3PL                      TCGA-FR-A3YN 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FR-A44A                      TCGA-FS-A1YW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZC                      TCGA-FS-A1ZD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZE                      TCGA-FS-A1ZF 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZG                      TCGA-FS-A1ZH 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FS-A1ZJ                      TCGA-FS-A1ZK 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZM                      TCGA-FS-A1ZP 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZQ                      TCGA-FS-A1ZR 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A265                      TCGA-GN-A266 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-D3-A1Q1                      TCGA-D3-A1Q5 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A1Q6                      TCGA-D3-A1Q7 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A1Q8                      TCGA-D3-A1Q9 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-D3-A2J6                      TCGA-D3-A2J8 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A2J9                      TCGA-D3-A2JD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A2JF                      TCGA-D3-A2JK 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3C6                      TCGA-D3-A3CC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3CE                      TCGA-D3-A3CF 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3MO                      TCGA-D3-A3MV 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A148                      TCGA-D9-A149 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A1JW                      TCGA-D9-A1JX 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A3Z1                      TCGA-D9-A3Z3 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1HV                      TCGA-DA-A1HW 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1HY                      TCGA-DA-A1I0 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I1                      TCGA-DA-A1I2 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I4                      TCGA-DA-A1I5 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I7                      TCGA-DA-A1I8 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1IA                      TCGA-DA-A1IB 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1IC                      TCGA-DA-A3F2 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A3F3                      TCGA-DA-A3F5 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A3F8                      TCGA-EE-A17X 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A17Z                      TCGA-EE-A181 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A182                      TCGA-EE-A183 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A185                      TCGA-EE-A20B 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A20F                      TCGA-EE-A20H 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29A                      TCGA-EE-A29C 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29D                      TCGA-EE-A29E 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29H                      TCGA-EE-A29L 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29M                      TCGA-EE-A29N 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29P                      TCGA-EE-A29Q 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A29R                      TCGA-EE-A29S 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29T                      TCGA-EE-A29V 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A29X                      TCGA-EE-A2A0 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2A1                      TCGA-EE-A2A2 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2A5                      TCGA-EE-A2A6 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GB                      TCGA-EE-A2GC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GD                      TCGA-EE-A2GE 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GH                      TCGA-EE-A2GI 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GJ                      TCGA-EE-A2GK 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GL                      TCGA-EE-A2GM 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GN                      TCGA-EE-A2GO 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GP                      TCGA-EE-A2GR 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GS                      TCGA-EE-A2GT 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GU                      TCGA-EE-A2M5 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2M6                      TCGA-EE-A2M7 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2M8                      TCGA-EE-A2MC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MD                      TCGA-EE-A2ME 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MG                      TCGA-EE-A2MH 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MI                      TCGA-EE-A2MJ 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MK                      TCGA-EE-A2ML 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MM                      TCGA-EE-A2MN 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MP                      TCGA-EE-A2MQ 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MR                      TCGA-EE-A2MS 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2MT                      TCGA-EE-A2MU 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A3AA                      TCGA-EE-A3AB 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AC                      TCGA-EE-A3AD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AE                      TCGA-EE-A3AF 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AG                      TCGA-EE-A3AH 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19D                      TCGA-ER-A19F 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19J                      TCGA-ER-A19L 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19M                      TCGA-ER-A19N 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A1A1                      TCGA-ER-A3ET 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A3PL                      TCGA-FR-A3YN 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FR-A44A                      TCGA-FS-A1YW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZC                      TCGA-FS-A1ZD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZE                      TCGA-FS-A1ZF 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZG                      TCGA-FS-A1ZH 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FS-A1ZJ                      TCGA-FS-A1ZK 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZM                      TCGA-FS-A1ZP 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZQ                      TCGA-FS-A1ZR 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A265                      TCGA-GN-A266 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-D3-A1Q1                      TCGA-D3-A1Q5 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A1Q6                      TCGA-D3-A1Q7 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A1Q8                      TCGA-D3-A1Q9 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-D3-A2J6                      TCGA-D3-A2J8 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A2J9                      TCGA-D3-A2JD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A2JF                      TCGA-D3-A2JK 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3C6                      TCGA-D3-A3CC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3CE                      TCGA-D3-A3CF 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D3-A3MO                      TCGA-D3-A3MV 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A148                      TCGA-D9-A149 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A1JW                      TCGA-D9-A1JX 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-D9-A3Z1                      TCGA-D9-A3Z3 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1HV                      TCGA-DA-A1HW 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1HY                      TCGA-DA-A1I0 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I1                      TCGA-DA-A1I2 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I4                      TCGA-DA-A1I5 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1I7                      TCGA-DA-A1I8 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1IA                      TCGA-DA-A1IB 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A1IC                      TCGA-DA-A3F2 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A3F3                      TCGA-DA-A3F5 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-DA-A3F8                      TCGA-EE-A17X 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A17Z                      TCGA-EE-A181 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A182                      TCGA-EE-A183 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A185                      TCGA-EE-A20B 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A20F                      TCGA-EE-A20H 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29A                      TCGA-EE-A29C 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29D                      TCGA-EE-A29E 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29H                      TCGA-EE-A29L 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29M                      TCGA-EE-A29N 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29P                      TCGA-EE-A29Q 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A29R                      TCGA-EE-A29S 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A29T                      TCGA-EE-A29V 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A29X                      TCGA-EE-A2A0 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2A1                      TCGA-EE-A2A2 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2A5                      TCGA-EE-A2A6 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GB                      TCGA-EE-A2GC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GD                      TCGA-EE-A2GE 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GH                      TCGA-EE-A2GI 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GJ                      TCGA-EE-A2GK 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GL                      TCGA-EE-A2GM 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GN                      TCGA-EE-A2GO 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GP                      TCGA-EE-A2GR 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GS                      TCGA-EE-A2GT 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2GU                      TCGA-EE-A2M5 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2M6                      TCGA-EE-A2M7 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2M8                      TCGA-EE-A2MC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MD                      TCGA-EE-A2ME 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MG                      TCGA-EE-A2MH 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MI                      TCGA-EE-A2MJ 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MK                      TCGA-EE-A2ML 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MM                      TCGA-EE-A2MN 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MP                      TCGA-EE-A2MQ 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A2MR                      TCGA-EE-A2MS 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A2MT                      TCGA-EE-A2MU 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-EE-A3AA                      TCGA-EE-A3AB 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AC                      TCGA-EE-A3AD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AE                      TCGA-EE-A3AF 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-EE-A3AG                      TCGA-EE-A3AH 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19D                      TCGA-ER-A19F 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19J                      TCGA-ER-A19L 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A19M                      TCGA-ER-A19N 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A1A1                      TCGA-ER-A3ET 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-ER-A3PL                      TCGA-FR-A3YN 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FR-A44A                      TCGA-FS-A1YW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 17(12P13.31) MUTATED" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZC                      TCGA-FS-A1ZD 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZE                      TCGA-FS-A1ZF 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZG                      TCGA-FS-A1ZH 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FS-A1ZJ                      TCGA-FS-A1ZK 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZM                      TCGA-FS-A1ZP 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZQ                      TCGA-FS-A1ZR 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A265                      TCGA-GN-A266 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
"DEL PEAK 17(12P13.31) WILD-TYPE" "DEL PEAK 17(12P13.31) WILD-TYPE" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
"DEL PEAK 17(12P13.31) WILD-TYPE"   "DEL PEAK 17(12P13.31) MUTATED" 
[1] "hr=" "1.3"
D41V2, continuous
                                 vv
clus                              DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 17(12P13.31) MUTATED                    3             0
  DEL PEAK 17(12P13.31) WILD-TYPE                 22             1
                                 vv
clus                              REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 17(12P13.31) MUTATED                                                                                          6
  DEL PEAK 17(12P13.31) WILD-TYPE                                                                                       29
                                 vv
clus                              REGIONAL LYMPH NODE
  DEL PEAK 17(12P13.31) MUTATED                    14
  DEL PEAK 17(12P13.31) WILD-TYPE                  98
D41V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 17(12P13.31) MUTATED
  DISTANT METASTASIS                                                                                                   3
  PRIMARY TUMOR                                                                                                        0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             6
  REGIONAL LYMPH NODE                                                                                                 14
                                                                                          clus
vv                                                                                         DEL PEAK 17(12P13.31) WILD-TYPE
  DISTANT METASTASIS                                                                                                    22
  PRIMARY TUMOR                                                                                                          1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                              29
  REGIONAL LYMPH NODE                                                                                                   98
D41V4, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 17(12P13.31) MUTATED     10   13
  DEL PEAK 17(12P13.31) WILD-TYPE   57   93
        clus
vv       DEL PEAK 17(12P13.31) MUTATED DEL PEAK 17(12P13.31) WILD-TYPE
  FEMALE                            10                              57
  MALE                              13                              93
                                 vv
clus                               M0  M1 M1A M1B M1C
  DEL PEAK 17(12P13.31) MUTATED    20   0   0   0   1
  DEL PEAK 17(12P13.31) WILD-TYPE 130   2   2   2   1
D41V5, multiclass
                                 vv
clus                              N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 17(12P13.31) MUTATED   12  0   1   3  1   1   1   2  1  0
  DEL PEAK 17(12P13.31) WILD-TYPE 83  2   6  13  0   3  10   3 15  2
D41V6, multiclass
D41V7, continuous
                                 vv
clus                              I OR II NOS STAGE I STAGE IA STAGE IB
  DEL PEAK 17(12P13.31) MUTATED             0       4        2        0
  DEL PEAK 17(12P13.31) WILD-TYPE           4      13        8       14
                                 vv
clus                              STAGE II STAGE IIA STAGE IIB STAGE IIC
  DEL PEAK 17(12P13.31) MUTATED          3         0         2         1
  DEL PEAK 17(12P13.31) WILD-TYPE       16         8         8         7
                                 vv
clus                              STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  DEL PEAK 17(12P13.31) MUTATED           2          0          5          2
  DEL PEAK 17(12P13.31) WILD-TYPE         7          6         13         21
                                 vv
clus                              STAGE IV
  DEL PEAK 17(12P13.31) MUTATED          1
  DEL PEAK 17(12P13.31) WILD-TYPE        5
D41V8, multiclass

Clustering(42) Variable = Del Peak 18(12q23.3) mutation analysis
D42V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 18(12Q23.3) MUTATED   23 15
  DEL PEAK 18(12Q23.3) WILD-TYPE 60 72
  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                            38                            132 
  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                            15                             72 
$`DEL PEAK 18(12Q23.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3MV TCGA-D9-A148 TCGA-DA-A1I1 
       16.57        58.03        71.24        21.47       148.31       194.83 
TCGA-EE-A20B TCGA-EE-A29D TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29X TCGA-EE-A2A2 
      109.64        13.97        37.35        55.89        17.92        24.43 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GU TCGA-EE-A2MG TCGA-EE-A2MK TCGA-EE-A2MP 
       13.87        14.30        67.13       103.17       144.76       248.61 
TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AD TCGA-EE-A3AE TCGA-ER-A3PL 
      136.44        53.26         4.24         3.68        26.73        33.21 
TCGA-FS-A1YX TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZH TCGA-FS-A1ZM TCGA-FS-A1ZQ 
       48.59        28.08        27.68        32.71       101.26       133.55 
TCGA-FS-A1ZT TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A266 
       53.16        50.14        12.43        22.98        47.54        10.09 
TCGA-GN-A267 TCGA-GN-A268 
       64.41        62.76 

$`DEL PEAK 18(12Q23.3) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J6 
      112.54        71.80       121.22        28.08        31.59        43.40 
TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3CE 
       65.49        23.77        11.87        48.76        12.10        60.23 
TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 
       24.53         9.30        49.74         2.70         6.38        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 
        3.22        48.89        36.03       117.17        20.38       176.55 
TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB 
       35.93       107.34        61.18        53.92        65.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
       68.09        28.60        10.49       215.44        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F 
        8.65        33.73        14.70        26.86         4.93        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
      168.26        63.32        47.84        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V 
       44.35        18.58        56.42        14.47       345.96        25.87 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC 
       46.82        78.94        39.25        58.75        47.54        43.23 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GS TCGA-EE-A2GT 
       55.00        75.48        90.94       101.95        55.59        19.56 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MM 
      103.27        16.96       204.62        96.23       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AB TCGA-EE-A3AC 
       47.54        43.23       103.56        41.59       122.73        25.84 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN 
      131.08        61.05        44.05        79.99        80.32        80.48 
TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 
      160.60       216.92       228.59       202.62        20.91         7.76 
TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       48.85       357.37        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU 
       47.38        23.93        74.73        11.41       148.77        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4FC TCGA-FW-A3I3 
       49.48        27.06        27.02        77.79        49.45         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A26A TCGA-GN-A26D 
       76.41       120.46       117.93        84.72        32.48        39.58 

  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                          3.68                           0.20 
  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                        248.61                         357.37 
  DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE 
                        48.065                         47.540 
[1] "3.7 - 248.6 (48.1)" "0.2 - 357.4 (47.5)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 18(12Q23.3) MUTATED" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 18(12Q23.3) WILD-TYPE"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 18(12Q23.3) MUTATED"   "DEL PEAK 18(12Q23.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 18(12Q23.3) WILD-TYPE" "DEL PEAK 18(12Q23.3) WILD-TYPE" 
[1] "hr=" "1.3"
D42V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 18(12Q23.3) MUTATED                    5             0
  DEL PEAK 18(12Q23.3) WILD-TYPE                 20             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 18(12Q23.3) MUTATED                                                                                         12
  DEL PEAK 18(12Q23.3) WILD-TYPE                                                                                       23
                                vv
clus                             REGIONAL LYMPH NODE
  DEL PEAK 18(12Q23.3) MUTATED                    21
  DEL PEAK 18(12Q23.3) WILD-TYPE                  91
D42V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 18(12Q23.3) MUTATED
  DISTANT METASTASIS                                                                                                  5
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           12
  REGIONAL LYMPH NODE                                                                                                21
                                                                                          clus
vv                                                                                         DEL PEAK 18(12Q23.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   20
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             23
  REGIONAL LYMPH NODE                                                                                                  91
D42V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 18(12Q23.3) MUTATED     17   21
  DEL PEAK 18(12Q23.3) WILD-TYPE   50   85
        clus
vv       DEL PEAK 18(12Q23.3) MUTATED DEL PEAK 18(12Q23.3) WILD-TYPE
  FEMALE                           17                             50
  MALE                             21                             85
                                vv
clus                              M0  M1 M1A M1B M1C
  DEL PEAK 18(12Q23.3) MUTATED    31   0   1   1   1
  DEL PEAK 18(12Q23.3) WILD-TYPE 119   2   1   1   1
D42V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 18(12Q23.3) MUTATED   20  0   2   3  1   1   0   3  4  0
  DEL PEAK 18(12Q23.3) WILD-TYPE 75  2   5  13  0   3  11   2 12  2
D42V6, multiclass
D42V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 18(12Q23.3) MUTATED             1       4        3        2        4
  DEL PEAK 18(12Q23.3) WILD-TYPE           3      13        7       12       15
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 18(12Q23.3) MUTATED           1         2         2         3
  DEL PEAK 18(12Q23.3) WILD-TYPE         7         8         6         6
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 18(12Q23.3) MUTATED            1          4          4        2
  DEL PEAK 18(12Q23.3) WILD-TYPE          5         14         19        4
D42V8, multiclass

Clustering(43) Variable = Del Peak 19(12q24.33) mutation analysis
D43V1, survival
                                 sevent
clus2                              0  1
  DEL PEAK 19(12Q24.33) MUTATED   22 17
  DEL PEAK 19(12Q24.33) WILD-TYPE 61 70
  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                             39                             131 
  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                             17                              70 
$`DEL PEAK 19(12Q24.33) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A2J6 TCGA-D3-A3CC TCGA-D3-A3MV TCGA-DA-A1I1 TCGA-DA-A1IA 
       16.57        43.40        71.24        21.47       194.83        65.92 
TCGA-EE-A20B TCGA-EE-A20H TCGA-EE-A29Q TCGA-EE-A29S TCGA-EE-A29X TCGA-EE-A2A2 
      109.64       168.26        37.35        55.89        17.92        24.43 
TCGA-EE-A2A5 TCGA-EE-A2GP TCGA-EE-A2GU TCGA-EE-A2MG TCGA-EE-A2MK TCGA-EE-A2MP 
       39.25        13.87        67.13       103.17       144.76       248.61 
TCGA-EE-A2MS TCGA-EE-A2MU TCGA-EE-A3AA TCGA-EE-A3AD TCGA-EE-A3AE TCGA-ER-A3PL 
      136.44        53.26         4.24         3.68        26.73        33.21 
TCGA-FS-A1YX TCGA-FS-A1Z4 TCGA-FS-A1ZA TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM 
       48.59        28.08        27.68        32.71        47.38       101.26 
TCGA-FS-A1ZT TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A265 
       53.16        50.14        12.43        22.98        47.54        84.72 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A268 
       10.09        64.41        62.76 

$`DEL PEAK 19(12Q24.33) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J8 
      112.54        71.80       121.22        28.08        31.59        65.49 
TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CE 
       23.77        11.87        48.76        12.10        58.03        60.23 
TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX 
       24.53         9.30       148.31        49.74         2.70         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I0 
       11.34         3.22        48.89        36.03       117.17        20.38 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IB 
      176.55        35.93       107.34        61.18        53.92        23.44 
TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X 
       68.09        28.60        10.49       215.44        15.68        29.82 
TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20F 
        8.65        33.73        14.70        26.86         4.93        78.87 
TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L 
       63.32        47.84        13.97        39.62        32.19         2.56 
TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29R TCGA-EE-A29T TCGA-EE-A29V 
       44.35        18.58        56.42        14.47       345.96        25.87 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD 
       46.82        78.94        58.75        47.54        43.23       314.53 
TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL 
      135.91       182.01        22.55        89.33        54.71        55.00 
TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT 
       75.48        90.94       101.95        14.30        55.59        19.56 
TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       21.67       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MM 
      103.27        16.96       204.62        96.23       203.01       167.87 
TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AB TCGA-EE-A3AC 
       47.54        43.23       103.56        41.59       122.73        25.84 
TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J 
       13.81        23.47       138.77        12.59        26.37         6.41 
TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN 
      131.08        61.05        44.05        79.99        80.32        80.48 
TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1Z7 
      160.60       216.92       228.59       202.62        20.91         7.76 
TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG 
       48.85       357.37        53.52        40.27        15.45         9.70 
TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU 
       23.93        74.73       133.55        11.41       148.77        26.56 
TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4FC TCGA-FW-A3I3 
       49.48        27.06        27.02        77.79        49.45         0.20 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A26A TCGA-GN-A26D 
       76.41       120.46       117.93        32.48        39.58 

  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                           3.68                            0.20 
  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                         248.61                          357.37 
  DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE 
                          47.54                           47.54 
[1] "3.7 - 248.6 (47.5)" "0.2 - 357.4 (47.5)"
                     TCGA-D3-A1Q1                      TCGA-D3-A1Q5 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A1Q6                      TCGA-D3-A1Q7 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A1Q8                      TCGA-D3-A1Q9 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A2J6                      TCGA-D3-A2J8 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A2J9                      TCGA-D3-A2JD 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A2JF                      TCGA-D3-A2JK 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A3C6                      TCGA-D3-A3CC 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-D3-A3CE                      TCGA-D3-A3CF 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A3MO                      TCGA-D3-A3MV 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-D9-A148                      TCGA-D9-A149 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A1JW                      TCGA-D9-A1JX 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A3Z1                      TCGA-D9-A3Z3 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1HV                      TCGA-DA-A1HW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1HY                      TCGA-DA-A1I0 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I1                      TCGA-DA-A1I2 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I4                      TCGA-DA-A1I5 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I7                      TCGA-DA-A1I8 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1IA                      TCGA-DA-A1IB 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1IC                      TCGA-DA-A3F2 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A3F3                      TCGA-DA-A3F5 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A3F8                      TCGA-EE-A17X 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A17Z                      TCGA-EE-A181 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A182                      TCGA-EE-A183 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A185                      TCGA-EE-A20B 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A20F                      TCGA-EE-A20H 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A29A                      TCGA-EE-A29C 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29D                      TCGA-EE-A29E 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29H                      TCGA-EE-A29L 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29M                      TCGA-EE-A29N 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29P                      TCGA-EE-A29Q 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A29R                      TCGA-EE-A29S 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A29T                      TCGA-EE-A29V 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29X                      TCGA-EE-A2A0 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2A1                      TCGA-EE-A2A2 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2A5                      TCGA-EE-A2A6 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GB                      TCGA-EE-A2GC 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GD                      TCGA-EE-A2GE 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GH                      TCGA-EE-A2GI 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GJ                      TCGA-EE-A2GK 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GL                      TCGA-EE-A2GM 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GN                      TCGA-EE-A2GO 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GP                      TCGA-EE-A2GR 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GS                      TCGA-EE-A2GT 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GU                      TCGA-EE-A2M5 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2M6                      TCGA-EE-A2M7 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2M8                      TCGA-EE-A2MC 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MD                      TCGA-EE-A2ME 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MG                      TCGA-EE-A2MH 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MI                      TCGA-EE-A2MJ 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MK                      TCGA-EE-A2ML 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MM                      TCGA-EE-A2MN 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MP                      TCGA-EE-A2MQ 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MR                      TCGA-EE-A2MS 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2MT                      TCGA-EE-A2MU 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A3AA                      TCGA-EE-A3AB 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A3AC                      TCGA-EE-A3AD 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A3AE                      TCGA-EE-A3AF 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A3AG                      TCGA-EE-A3AH 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19D                      TCGA-ER-A19F 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19J                      TCGA-ER-A19L 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19M                      TCGA-ER-A19N 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A1A1                      TCGA-ER-A3ET 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A3PL                      TCGA-FR-A3YN 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FR-A44A                      TCGA-FS-A1YW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZC                      TCGA-FS-A1ZD 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZE                      TCGA-FS-A1ZF 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZG                      TCGA-FS-A1ZH 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZJ                      TCGA-FS-A1ZK 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZM                      TCGA-FS-A1ZP 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZQ                      TCGA-FS-A1ZR 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-GN-A265                      TCGA-GN-A266 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A1Q1                      TCGA-D3-A1Q5 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A1Q6                      TCGA-D3-A1Q7 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A1Q8                      TCGA-D3-A1Q9 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A2J6                      TCGA-D3-A2J8 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A2J9                      TCGA-D3-A2JD 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A2JF                      TCGA-D3-A2JK 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A3C6                      TCGA-D3-A3CC 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-D3-A3CE                      TCGA-D3-A3CF 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A3MO                      TCGA-D3-A3MV 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-D9-A148                      TCGA-D9-A149 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A1JW                      TCGA-D9-A1JX 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A3Z1                      TCGA-D9-A3Z3 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1HV                      TCGA-DA-A1HW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1HY                      TCGA-DA-A1I0 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I1                      TCGA-DA-A1I2 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I4                      TCGA-DA-A1I5 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I7                      TCGA-DA-A1I8 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1IA                      TCGA-DA-A1IB 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1IC                      TCGA-DA-A3F2 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A3F3                      TCGA-DA-A3F5 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A3F8                      TCGA-EE-A17X 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A17Z                      TCGA-EE-A181 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A182                      TCGA-EE-A183 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A185                      TCGA-EE-A20B 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A20F                      TCGA-EE-A20H 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A29A                      TCGA-EE-A29C 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29D                      TCGA-EE-A29E 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29H                      TCGA-EE-A29L 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29M                      TCGA-EE-A29N 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29P                      TCGA-EE-A29Q 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A29R                      TCGA-EE-A29S 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A29T                      TCGA-EE-A29V 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29X                      TCGA-EE-A2A0 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2A1                      TCGA-EE-A2A2 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2A5                      TCGA-EE-A2A6 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GB                      TCGA-EE-A2GC 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GD                      TCGA-EE-A2GE 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GH                      TCGA-EE-A2GI 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GJ                      TCGA-EE-A2GK 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GL                      TCGA-EE-A2GM 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GN                      TCGA-EE-A2GO 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GP                      TCGA-EE-A2GR 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GS                      TCGA-EE-A2GT 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GU                      TCGA-EE-A2M5 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2M6                      TCGA-EE-A2M7 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2M8                      TCGA-EE-A2MC 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MD                      TCGA-EE-A2ME 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MG                      TCGA-EE-A2MH 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MI                      TCGA-EE-A2MJ 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MK                      TCGA-EE-A2ML 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MM                      TCGA-EE-A2MN 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MP                      TCGA-EE-A2MQ 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MR                      TCGA-EE-A2MS 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2MT                      TCGA-EE-A2MU 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A3AA                      TCGA-EE-A3AB 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A3AC                      TCGA-EE-A3AD 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A3AE                      TCGA-EE-A3AF 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A3AG                      TCGA-EE-A3AH 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19D                      TCGA-ER-A19F 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19J                      TCGA-ER-A19L 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19M                      TCGA-ER-A19N 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A1A1                      TCGA-ER-A3ET 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A3PL                      TCGA-FR-A3YN 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FR-A44A                      TCGA-FS-A1YW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZC                      TCGA-FS-A1ZD 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZE                      TCGA-FS-A1ZF 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZG                      TCGA-FS-A1ZH 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZJ                      TCGA-FS-A1ZK 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZM                      TCGA-FS-A1ZP 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZQ                      TCGA-FS-A1ZR 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-GN-A265                      TCGA-GN-A266 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A1Q1                      TCGA-D3-A1Q5 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A1Q6                      TCGA-D3-A1Q7 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A1Q8                      TCGA-D3-A1Q9 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A2J6                      TCGA-D3-A2J8 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A2J9                      TCGA-D3-A2JD 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A2JF                      TCGA-D3-A2JK 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A3C6                      TCGA-D3-A3CC 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-D3-A3CE                      TCGA-D3-A3CF 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D3-A3MO                      TCGA-D3-A3MV 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-D9-A148                      TCGA-D9-A149 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A1JW                      TCGA-D9-A1JX 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-D9-A3Z1                      TCGA-D9-A3Z3 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1HV                      TCGA-DA-A1HW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1HY                      TCGA-DA-A1I0 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I1                      TCGA-DA-A1I2 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I4                      TCGA-DA-A1I5 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1I7                      TCGA-DA-A1I8 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1IA                      TCGA-DA-A1IB 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A1IC                      TCGA-DA-A3F2 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A3F3                      TCGA-DA-A3F5 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-DA-A3F8                      TCGA-EE-A17X 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A17Z                      TCGA-EE-A181 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A182                      TCGA-EE-A183 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A185                      TCGA-EE-A20B 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A20F                      TCGA-EE-A20H 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A29A                      TCGA-EE-A29C 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29D                      TCGA-EE-A29E 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29H                      TCGA-EE-A29L 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29M                      TCGA-EE-A29N 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29P                      TCGA-EE-A29Q 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A29R                      TCGA-EE-A29S 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A29T                      TCGA-EE-A29V 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A29X                      TCGA-EE-A2A0 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2A1                      TCGA-EE-A2A2 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2A5                      TCGA-EE-A2A6 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GB                      TCGA-EE-A2GC 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GD                      TCGA-EE-A2GE 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GH                      TCGA-EE-A2GI 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GJ                      TCGA-EE-A2GK 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GL                      TCGA-EE-A2GM 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GN                      TCGA-EE-A2GO 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GP                      TCGA-EE-A2GR 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GS                      TCGA-EE-A2GT 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2GU                      TCGA-EE-A2M5 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2M6                      TCGA-EE-A2M7 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2M8                      TCGA-EE-A2MC 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MD                      TCGA-EE-A2ME 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MG                      TCGA-EE-A2MH 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MI                      TCGA-EE-A2MJ 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MK                      TCGA-EE-A2ML 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MM                      TCGA-EE-A2MN 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MP                      TCGA-EE-A2MQ 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A2MR                      TCGA-EE-A2MS 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A2MT                      TCGA-EE-A2MU 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A3AA                      TCGA-EE-A3AB 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A3AC                      TCGA-EE-A3AD 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-EE-A3AE                      TCGA-EE-A3AF 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-EE-A3AG                      TCGA-EE-A3AH 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19D                      TCGA-ER-A19F 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19J                      TCGA-ER-A19L 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A19M                      TCGA-ER-A19N 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A1A1                      TCGA-ER-A3ET 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-ER-A3PL                      TCGA-FR-A3YN 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FR-A44A                      TCGA-FS-A1YW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1YX                      TCGA-FS-A1YY 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1Z0                      TCGA-FS-A1Z3 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1Z4                      TCGA-FS-A1Z7 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZA                      TCGA-FS-A1ZB 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZC                      TCGA-FS-A1ZD 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZE                      TCGA-FS-A1ZF 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZG                      TCGA-FS-A1ZH 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZJ                      TCGA-FS-A1ZK 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZM                      TCGA-FS-A1ZP 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZQ                      TCGA-FS-A1ZR 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZS                      TCGA-FS-A1ZT 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A1ZU                      TCGA-FS-A1ZW 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A1ZY                      TCGA-FS-A1ZZ 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FS-A4F0                      TCGA-FS-A4F2 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FS-A4F9                      TCGA-FS-A4FC 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-FW-A3I3                      TCGA-FW-A3R5 
"DEL PEAK 19(12Q24.33) WILD-TYPE"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-FW-A3TU                      TCGA-GN-A261 
  "DEL PEAK 19(12Q24.33) MUTATED" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-GN-A262                      TCGA-GN-A264 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
                     TCGA-GN-A265                      TCGA-GN-A266 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-GN-A267                      TCGA-GN-A268 
  "DEL PEAK 19(12Q24.33) MUTATED"   "DEL PEAK 19(12Q24.33) MUTATED" 
                     TCGA-GN-A26A                      TCGA-GN-A26D 
"DEL PEAK 19(12Q24.33) WILD-TYPE" "DEL PEAK 19(12Q24.33) WILD-TYPE" 
[1] "hr=" "1.1"
D43V2, continuous
                                 vv
clus                              DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 19(12Q24.33) MUTATED                    6             0
  DEL PEAK 19(12Q24.33) WILD-TYPE                 19             1
                                 vv
clus                              REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 19(12Q24.33) MUTATED                                                                                         12
  DEL PEAK 19(12Q24.33) WILD-TYPE                                                                                       23
                                 vv
clus                              REGIONAL LYMPH NODE
  DEL PEAK 19(12Q24.33) MUTATED                    21
  DEL PEAK 19(12Q24.33) WILD-TYPE                  91
D43V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 19(12Q24.33) MUTATED
  DISTANT METASTASIS                                                                                                   6
  PRIMARY TUMOR                                                                                                        0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            12
  REGIONAL LYMPH NODE                                                                                                 21
                                                                                          clus
vv                                                                                         DEL PEAK 19(12Q24.33) WILD-TYPE
  DISTANT METASTASIS                                                                                                    19
  PRIMARY TUMOR                                                                                                          1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                              23
  REGIONAL LYMPH NODE                                                                                                   91
D43V4, binary
[1] "tbl2"
                                 cls
clus                              [,1] [,2]
  DEL PEAK 19(12Q24.33) MUTATED     18   21
  DEL PEAK 19(12Q24.33) WILD-TYPE   49   85
        clus
vv       DEL PEAK 19(12Q24.33) MUTATED DEL PEAK 19(12Q24.33) WILD-TYPE
  FEMALE                            18                              49
  MALE                              21                              85
                                 vv
clus                               M0  M1 M1A M1B M1C
  DEL PEAK 19(12Q24.33) MUTATED    32   0   1   0   1
  DEL PEAK 19(12Q24.33) WILD-TYPE 118   2   1   2   1
D43V5, multiclass
                                 vv
clus                              N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 19(12Q24.33) MUTATED   21  0   2   3  1   1   0   3  3  0
  DEL PEAK 19(12Q24.33) WILD-TYPE 74  2   5  13  0   3  11   2 13  2
D43V6, multiclass
D43V7, continuous
                                 vv
clus                              I OR II NOS STAGE I STAGE IA STAGE IB
  DEL PEAK 19(12Q24.33) MUTATED             0       6        3        2
  DEL PEAK 19(12Q24.33) WILD-TYPE           4      11        7       12
                                 vv
clus                              STAGE II STAGE IIA STAGE IIB STAGE IIC
  DEL PEAK 19(12Q24.33) MUTATED          3         1         3         2
  DEL PEAK 19(12Q24.33) WILD-TYPE       16         7         7         6
                                 vv
clus                              STAGE III STAGE IIIA STAGE IIIB STAGE IIIC
  DEL PEAK 19(12Q24.33) MUTATED           3          1          5          3
  DEL PEAK 19(12Q24.33) WILD-TYPE         6          5         13         20
                                 vv
clus                              STAGE IV
  DEL PEAK 19(12Q24.33) MUTATED          2
  DEL PEAK 19(12Q24.33) WILD-TYPE        4
D43V8, multiclass

Clustering(44) Variable = Del Peak 20(13q34) mutation analysis
D44V1, survival
                              sevent
clus2                           0  1
  DEL PEAK 20(13Q34) MUTATED   23 19
  DEL PEAK 20(13Q34) WILD-TYPE 60 68
  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                          42                          128 
  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                          19                           68 
$`DEL PEAK 20(13Q34) MUTATED`
TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J8 TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A3Z3 
       28.08        31.59        65.49       148.31        49.74         3.22 
TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I8 
       48.89        36.03       176.55        35.93       107.34        53.92 
TCGA-DA-A1IC TCGA-DA-A3F5 TCGA-EE-A181 TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29N 
       68.09       215.44        33.73        13.97        39.62        18.58 
TCGA-EE-A29Q TCGA-EE-A29T TCGA-EE-A2A6 TCGA-EE-A2GE TCGA-EE-A2GI TCGA-EE-A2GJ 
       37.35       345.96        58.75       135.91        22.55        89.33 
TCGA-EE-A2GM TCGA-EE-A2M5 TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MR TCGA-EE-A2MS 
       75.48        21.67       103.17        16.96       103.56       136.44 
TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AE TCGA-EE-A3AH TCGA-FR-A3YN TCGA-FS-A1ZA 
       53.26       122.73        26.73       138.77        80.48        27.68 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZM TCGA-FS-A4F9 TCGA-GN-A266 TCGA-GN-A26D 
       32.71        47.38       101.26        12.43        10.09        39.58 

$`DEL PEAK 20(13Q34) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A2J6 TCGA-D3-A2J9 
       16.57       112.54        71.80       121.22        43.40        23.77 
TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CE 
       11.87        48.76        12.10        58.03        71.24        60.23 
TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 
       24.53         9.30        21.47         2.70         6.38        11.34 
TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I7 TCGA-DA-A1IA TCGA-DA-A1IB 
      117.17        20.38       194.83        61.18        65.92        23.44 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 
       28.60        10.49        15.68        29.82         8.65        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29C TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29R 
       47.84        32.19         2.56        44.35        56.42        14.47 
TCGA-EE-A29S TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
       55.89        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GH TCGA-EE-A2GK 
       39.25        47.54        43.23       314.53       182.01        54.71 
TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       55.00        90.94       101.95        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC 
       19.56        67.13       129.24        28.80        19.76        61.51 
TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2ML 
       47.28       103.27       204.62        96.23       144.76       203.01 
TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MT TCGA-EE-A3AA 
      167.87        47.54       248.61        43.23        41.59         4.24 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AF TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F 
       25.84         3.68        13.81        23.47        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
        6.41       131.08        61.05        44.05        79.99        80.32 
TCGA-ER-A3PL TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 
       33.21       160.60       216.92        48.59       228.59       202.62 
TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD 
       20.91        28.08         7.76        48.85       357.37        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZQ 
       40.27        15.45         9.70        23.93        74.73       133.55 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 
       27.02        77.79        50.14        49.45         0.20        22.98 
TCGA-FW-A3TU TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A267 
       47.54        76.41       120.46       117.93        84.72        64.41 
TCGA-GN-A268 TCGA-GN-A26A 
       62.76        32.48 

  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                        3.22                         0.20 
  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                      345.96                       357.37 
  DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE 
                      49.315                       47.540 
[1] "3.2 - 346.0 (49.3)" "0.2 - 357.4 (47.5)"
                  TCGA-D3-A1Q1                   TCGA-D3-A1Q5 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A1Q6                   TCGA-D3-A1Q7 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A1Q8                   TCGA-D3-A1Q9 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D3-A2J6                   TCGA-D3-A2J8 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D3-A2J9                   TCGA-D3-A2JD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A2JF                   TCGA-D3-A2JK 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3C6                   TCGA-D3-A3CC 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3CE                   TCGA-D3-A3CF 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3MO                   TCGA-D3-A3MV 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D9-A148                   TCGA-D9-A149 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D9-A1JW                   TCGA-D9-A1JX 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D9-A3Z1                   TCGA-D9-A3Z3 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1HV                   TCGA-DA-A1HW 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1HY                   TCGA-DA-A1I0 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1I1                   TCGA-DA-A1I2 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1I4                   TCGA-DA-A1I5 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1I7                   TCGA-DA-A1I8 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1IA                   TCGA-DA-A1IB 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1IC                   TCGA-DA-A3F2 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A3F3                   TCGA-DA-A3F5 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A3F8                   TCGA-EE-A17X 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A17Z                   TCGA-EE-A181 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A182                   TCGA-EE-A183 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A185                   TCGA-EE-A20B 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A20F                   TCGA-EE-A20H 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29A                   TCGA-EE-A29C 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29D                   TCGA-EE-A29E 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29H                   TCGA-EE-A29L 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29M                   TCGA-EE-A29N 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29P                   TCGA-EE-A29Q 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29R                   TCGA-EE-A29S 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29T                   TCGA-EE-A29V 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29X                   TCGA-EE-A2A0 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A1                   TCGA-EE-A2A2 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A5                   TCGA-EE-A2A6 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GB                   TCGA-EE-A2GC 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GD                   TCGA-EE-A2GE 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GH                   TCGA-EE-A2GI 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GJ                   TCGA-EE-A2GK 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GL                   TCGA-EE-A2GM 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GN                   TCGA-EE-A2GO 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GP                   TCGA-EE-A2GR 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GS                   TCGA-EE-A2GT 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GU                   TCGA-EE-A2M5 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2M6                   TCGA-EE-A2M7 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2M8                   TCGA-EE-A2MC 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MD                   TCGA-EE-A2ME 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MG                   TCGA-EE-A2MH 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2MI                   TCGA-EE-A2MJ 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MK                   TCGA-EE-A2ML 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MM                   TCGA-EE-A2MN 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MP                   TCGA-EE-A2MQ 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MR                   TCGA-EE-A2MS 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2MT                   TCGA-EE-A2MU 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A3AA                   TCGA-EE-A3AB 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A3AC                   TCGA-EE-A3AD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AE                   TCGA-EE-A3AF 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AG                   TCGA-EE-A3AH 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-ER-A19D                   TCGA-ER-A19F 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19J                   TCGA-ER-A19L 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19M                   TCGA-ER-A19N 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A1A1                   TCGA-ER-A3ET 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A3PL                   TCGA-FR-A3YN 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-FR-A44A                   TCGA-FS-A1YW 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1YX                   TCGA-FS-A1YY 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1Z0                   TCGA-FS-A1Z3 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1Z4                   TCGA-FS-A1Z7 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZA                   TCGA-FS-A1ZB 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZC                   TCGA-FS-A1ZD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZE                   TCGA-FS-A1ZF 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZG                   TCGA-FS-A1ZH 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-FS-A1ZJ                   TCGA-FS-A1ZK 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZM                   TCGA-FS-A1ZP 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZQ                   TCGA-FS-A1ZR 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZS                   TCGA-FS-A1ZT 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZU                   TCGA-FS-A1ZW 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZY                   TCGA-FS-A1ZZ 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A4F0                   TCGA-FS-A4F2 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A4F9                   TCGA-FS-A4FC 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FW-A3I3                   TCGA-FW-A3R5 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FW-A3TU                   TCGA-GN-A261 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A262                   TCGA-GN-A264 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A265                   TCGA-GN-A266 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-GN-A267                   TCGA-GN-A268 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A26A                   TCGA-GN-A26D 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D3-A1Q1                   TCGA-D3-A1Q5 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A1Q6                   TCGA-D3-A1Q7 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A1Q8                   TCGA-D3-A1Q9 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D3-A2J6                   TCGA-D3-A2J8 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D3-A2J9                   TCGA-D3-A2JD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A2JF                   TCGA-D3-A2JK 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3C6                   TCGA-D3-A3CC 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3CE                   TCGA-D3-A3CF 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3MO                   TCGA-D3-A3MV 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D9-A148                   TCGA-D9-A149 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D9-A1JW                   TCGA-D9-A1JX 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D9-A3Z1                   TCGA-D9-A3Z3 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1HV                   TCGA-DA-A1HW 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1HY                   TCGA-DA-A1I0 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1I1                   TCGA-DA-A1I2 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1I4                   TCGA-DA-A1I5 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1I7                   TCGA-DA-A1I8 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1IA                   TCGA-DA-A1IB 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1IC                   TCGA-DA-A3F2 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A3F3                   TCGA-DA-A3F5 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A3F8                   TCGA-EE-A17X 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A17Z                   TCGA-EE-A181 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A182                   TCGA-EE-A183 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A185                   TCGA-EE-A20B 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A20F                   TCGA-EE-A20H 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29A                   TCGA-EE-A29C 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29D                   TCGA-EE-A29E 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29H                   TCGA-EE-A29L 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29M                   TCGA-EE-A29N 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29P                   TCGA-EE-A29Q 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29R                   TCGA-EE-A29S 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29T                   TCGA-EE-A29V 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29X                   TCGA-EE-A2A0 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A1                   TCGA-EE-A2A2 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A5                   TCGA-EE-A2A6 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GB                   TCGA-EE-A2GC 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GD                   TCGA-EE-A2GE 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GH                   TCGA-EE-A2GI 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GJ                   TCGA-EE-A2GK 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GL                   TCGA-EE-A2GM 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GN                   TCGA-EE-A2GO 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GP                   TCGA-EE-A2GR 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GS                   TCGA-EE-A2GT 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GU                   TCGA-EE-A2M5 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2M6                   TCGA-EE-A2M7 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2M8                   TCGA-EE-A2MC 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MD                   TCGA-EE-A2ME 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MG                   TCGA-EE-A2MH 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2MI                   TCGA-EE-A2MJ 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MK                   TCGA-EE-A2ML 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MM                   TCGA-EE-A2MN 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MP                   TCGA-EE-A2MQ 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MR                   TCGA-EE-A2MS 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2MT                   TCGA-EE-A2MU 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A3AA                   TCGA-EE-A3AB 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A3AC                   TCGA-EE-A3AD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AE                   TCGA-EE-A3AF 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AG                   TCGA-EE-A3AH 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-ER-A19D                   TCGA-ER-A19F 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19J                   TCGA-ER-A19L 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19M                   TCGA-ER-A19N 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A1A1                   TCGA-ER-A3ET 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A3PL                   TCGA-FR-A3YN 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-FR-A44A                   TCGA-FS-A1YW 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1YX                   TCGA-FS-A1YY 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1Z0                   TCGA-FS-A1Z3 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1Z4                   TCGA-FS-A1Z7 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZA                   TCGA-FS-A1ZB 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZC                   TCGA-FS-A1ZD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZE                   TCGA-FS-A1ZF 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZG                   TCGA-FS-A1ZH 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-FS-A1ZJ                   TCGA-FS-A1ZK 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZM                   TCGA-FS-A1ZP 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZQ                   TCGA-FS-A1ZR 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZS                   TCGA-FS-A1ZT 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZU                   TCGA-FS-A1ZW 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZY                   TCGA-FS-A1ZZ 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A4F0                   TCGA-FS-A4F2 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A4F9                   TCGA-FS-A4FC 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FW-A3I3                   TCGA-FW-A3R5 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FW-A3TU                   TCGA-GN-A261 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A262                   TCGA-GN-A264 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A265                   TCGA-GN-A266 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-GN-A267                   TCGA-GN-A268 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A26A                   TCGA-GN-A26D 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D3-A1Q1                   TCGA-D3-A1Q5 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A1Q6                   TCGA-D3-A1Q7 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A1Q8                   TCGA-D3-A1Q9 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D3-A2J6                   TCGA-D3-A2J8 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D3-A2J9                   TCGA-D3-A2JD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A2JF                   TCGA-D3-A2JK 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3C6                   TCGA-D3-A3CC 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3CE                   TCGA-D3-A3CF 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D3-A3MO                   TCGA-D3-A3MV 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D9-A148                   TCGA-D9-A149 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-D9-A1JW                   TCGA-D9-A1JX 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-D9-A3Z1                   TCGA-D9-A3Z3 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1HV                   TCGA-DA-A1HW 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1HY                   TCGA-DA-A1I0 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1I1                   TCGA-DA-A1I2 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1I4                   TCGA-DA-A1I5 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1I7                   TCGA-DA-A1I8 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A1IA                   TCGA-DA-A1IB 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A1IC                   TCGA-DA-A3F2 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-DA-A3F3                   TCGA-DA-A3F5 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-DA-A3F8                   TCGA-EE-A17X 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A17Z                   TCGA-EE-A181 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A182                   TCGA-EE-A183 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A185                   TCGA-EE-A20B 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A20F                   TCGA-EE-A20H 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29A                   TCGA-EE-A29C 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29D                   TCGA-EE-A29E 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29H                   TCGA-EE-A29L 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29M                   TCGA-EE-A29N 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29P                   TCGA-EE-A29Q 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A29R                   TCGA-EE-A29S 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29T                   TCGA-EE-A29V 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A29X                   TCGA-EE-A2A0 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A1                   TCGA-EE-A2A2 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2A5                   TCGA-EE-A2A6 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GB                   TCGA-EE-A2GC 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GD                   TCGA-EE-A2GE 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GH                   TCGA-EE-A2GI 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GJ                   TCGA-EE-A2GK 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GL                   TCGA-EE-A2GM 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2GN                   TCGA-EE-A2GO 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GP                   TCGA-EE-A2GR 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GS                   TCGA-EE-A2GT 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2GU                   TCGA-EE-A2M5 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2M6                   TCGA-EE-A2M7 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2M8                   TCGA-EE-A2MC 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MD                   TCGA-EE-A2ME 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MG                   TCGA-EE-A2MH 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2MI                   TCGA-EE-A2MJ 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MK                   TCGA-EE-A2ML 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MM                   TCGA-EE-A2MN 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MP                   TCGA-EE-A2MQ 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A2MR                   TCGA-EE-A2MS 
  "DEL PEAK 20(13Q34) MUTATED"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A2MT                   TCGA-EE-A2MU 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A3AA                   TCGA-EE-A3AB 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-EE-A3AC                   TCGA-EE-A3AD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AE                   TCGA-EE-A3AF 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-EE-A3AG                   TCGA-EE-A3AH 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-ER-A19D                   TCGA-ER-A19F 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19J                   TCGA-ER-A19L 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A19M                   TCGA-ER-A19N 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A1A1                   TCGA-ER-A3ET 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-ER-A3PL                   TCGA-FR-A3YN 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-FR-A44A                   TCGA-FS-A1YW 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1YX                   TCGA-FS-A1YY 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1Z0                   TCGA-FS-A1Z3 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1Z4                   TCGA-FS-A1Z7 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZA                   TCGA-FS-A1ZB 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZC                   TCGA-FS-A1ZD 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZE                   TCGA-FS-A1ZF 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZG                   TCGA-FS-A1ZH 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-FS-A1ZJ                   TCGA-FS-A1ZK 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZM                   TCGA-FS-A1ZP 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZQ                   TCGA-FS-A1ZR 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZS                   TCGA-FS-A1ZT 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZU                   TCGA-FS-A1ZW 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A1ZY                   TCGA-FS-A1ZZ 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A4F0                   TCGA-FS-A4F2 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FS-A4F9                   TCGA-FS-A4FC 
  "DEL PEAK 20(13Q34) MUTATED" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FW-A3I3                   TCGA-FW-A3R5 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-FW-A3TU                   TCGA-GN-A261 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A262                   TCGA-GN-A264 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A265                   TCGA-GN-A266 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
                  TCGA-GN-A267                   TCGA-GN-A268 
"DEL PEAK 20(13Q34) WILD-TYPE" "DEL PEAK 20(13Q34) WILD-TYPE" 
                  TCGA-GN-A26A                   TCGA-GN-A26D 
"DEL PEAK 20(13Q34) WILD-TYPE"   "DEL PEAK 20(13Q34) MUTATED" 
[1] "hr=" "1.3"
D44V2, continuous
                              vv
clus                           DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 20(13Q34) MUTATED                    2             0
  DEL PEAK 20(13Q34) WILD-TYPE                 23             1
                              vv
clus                           REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 20(13Q34) MUTATED                                                                                          9
  DEL PEAK 20(13Q34) WILD-TYPE                                                                                       26
                              vv
clus                           REGIONAL LYMPH NODE
  DEL PEAK 20(13Q34) MUTATED                    31
  DEL PEAK 20(13Q34) WILD-TYPE                  81
D44V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 20(13Q34) MUTATED
  DISTANT METASTASIS                                                                                                2
  PRIMARY TUMOR                                                                                                     0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                          9
  REGIONAL LYMPH NODE                                                                                              31
                                                                                          clus
vv                                                                                         DEL PEAK 20(13Q34) WILD-TYPE
  DISTANT METASTASIS                                                                                                 23
  PRIMARY TUMOR                                                                                                       1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           26
  REGIONAL LYMPH NODE                                                                                                81
D44V4, binary
[1] "tbl2"
                              cls
clus                           [,1] [,2]
  DEL PEAK 20(13Q34) MUTATED     14   28
  DEL PEAK 20(13Q34) WILD-TYPE   53   78
        clus
vv       DEL PEAK 20(13Q34) MUTATED DEL PEAK 20(13Q34) WILD-TYPE
  FEMALE                         14                           53
  MALE                           28                           78
                              vv
clus                            M0  M1 M1A M1B M1C
  DEL PEAK 20(13Q34) MUTATED    35   0   0   2   2
  DEL PEAK 20(13Q34) WILD-TYPE 115   2   2   0   0
D44V5, multiclass
                              vv
clus                           N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 20(13Q34) MUTATED   21  0   0   5  0   1   3   4  5  1
  DEL PEAK 20(13Q34) WILD-TYPE 74  2   7  11  1   3   8   1 11  1
D44V6, multiclass
D44V7, continuous
                              vv
clus                           I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 20(13Q34) MUTATED             0       5        5        2        4
  DEL PEAK 20(13Q34) WILD-TYPE           4      12        5       12       15
                              vv
clus                           STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 20(13Q34) MUTATED           0         1         2         1
  DEL PEAK 20(13Q34) WILD-TYPE         8         9         6         8
                              vv
clus                           STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 20(13Q34) MUTATED            0          8          5        3
  DEL PEAK 20(13Q34) WILD-TYPE          6         10         18        3
D44V8, multiclass

Clustering(45) Variable = Del Peak 21(14q32.2) mutation analysis
D45V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 21(14Q32.2) MUTATED   27 30
  DEL PEAK 21(14Q32.2) WILD-TYPE 56 57
  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                            57                            113 
  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                            30                             57 
$`DEL PEAK 21(14Q32.2) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q5 TCGA-D3-A2J6 TCGA-D3-A2JF TCGA-D3-A3CC TCGA-D3-A3CE 
       16.57       112.54        43.40        48.76        71.24        60.23 
TCGA-D3-A3MV TCGA-D9-A149 TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I5 
       21.47        49.74        48.89       117.17       194.83       107.34 
TCGA-DA-A1I8 TCGA-DA-A3F5 TCGA-EE-A181 TCGA-EE-A29C TCGA-EE-A29V TCGA-EE-A2A2 
       53.92       215.44        33.73        47.84        25.87        24.43 
TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GE TCGA-EE-A2GJ TCGA-EE-A2GP 
       39.25        58.75        47.54       135.91        89.33        13.87 
TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD 
       67.13       129.24        28.80        19.76        61.51        47.28 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MK TCGA-EE-A2MN TCGA-EE-A2MS TCGA-EE-A3AA 
      103.17        16.96       144.76        47.54       136.44         4.24 
TCGA-EE-A3AH TCGA-ER-A3PL TCGA-FR-A44A TCGA-FS-A1YX TCGA-FS-A1Z4 TCGA-FS-A1Z7 
      138.77        33.21       160.60        48.59        28.08         7.76 
TCGA-FS-A1ZA TCGA-FS-A1ZC TCGA-FS-A1ZE TCGA-FS-A1ZH TCGA-FS-A1ZM TCGA-FS-A1ZQ 
       27.68       357.37        40.27        32.71       101.26       133.55 
TCGA-FS-A1ZR TCGA-FS-A1ZT TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FW-A3TU TCGA-GN-A264 
       11.41        53.16        50.14        12.43        47.54       117.93 
TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26A 
       64.41        62.76        32.48 

$`DEL PEAK 21(14Q32.2) WILD-TYPE`
TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J8 TCGA-D3-A2J9 
       71.80       121.22        28.08        31.59        65.49        23.77 
TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D9-A148 
       11.87        12.10        58.03        24.53         9.30       148.31 
TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1I0 
        2.70         6.38        11.34         3.22        36.03        20.38 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I7 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC 
      176.55        35.93        61.18        65.92        23.44        68.09 
TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 
       28.60        10.49        15.68        29.82         8.65        14.70 
TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A 
       26.86         4.93       109.64        78.87       168.26        63.32 
TCGA-EE-A29D TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N 
       13.97        39.62        32.19         2.56        44.35        18.58 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29X 
       56.42        37.35        14.47        55.89       345.96        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GH TCGA-EE-A2GI 
       46.82        78.94        43.23       314.53       182.01        22.55 
TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GR 
       54.71        55.00        75.48        90.94       101.95        14.30 
TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2ME TCGA-EE-A2MI TCGA-EE-A2MJ 
       55.59        19.56        21.67       103.27       204.62        96.23 
TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MT 
      203.01       167.87       248.61        43.23       103.56        41.59 
TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF 
       53.26       122.73        25.84         3.68        26.73        13.81 
TCGA-EE-A3AG TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M 
       23.47        12.59        26.37         6.41       131.08        61.05 
TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FS-A1YW TCGA-FS-A1YY 
       44.05        79.99        80.32        80.48       216.92       228.59 
TCGA-FS-A1Z0 TCGA-FS-A1Z3 TCGA-FS-A1ZB TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZG 
      202.62        20.91        48.85        53.52        15.45         9.70 
TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZP TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZW 
       47.38        23.93        74.73       148.77        26.56        49.48 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 
       27.06        27.02        77.79        49.45         0.20        22.98 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A26D 
       76.41       120.46        84.72        10.09        39.58 

  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                          4.24                           0.20 
  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                        357.37                         345.96 
  DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE 
                         48.89                          43.23 
[1] "4.2 - 357.4 (48.9)" "0.2 - 346.0 (43.2)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 21(14Q32.2) WILD-TYPE"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 21(14Q32.2) WILD-TYPE" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 21(14Q32.2) MUTATED"   "DEL PEAK 21(14Q32.2) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
  "DEL PEAK 21(14Q32.2) MUTATED" "DEL PEAK 21(14Q32.2) WILD-TYPE" 
[1] "hr=" "1.1"
D45V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 21(14Q32.2) MUTATED                   11             0
  DEL PEAK 21(14Q32.2) WILD-TYPE                 14             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 21(14Q32.2) MUTATED                                                                                         12
  DEL PEAK 21(14Q32.2) WILD-TYPE                                                                                       23
                                vv
clus                             REGIONAL LYMPH NODE
  DEL PEAK 21(14Q32.2) MUTATED                    35
  DEL PEAK 21(14Q32.2) WILD-TYPE                  77
D45V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 21(14Q32.2) MUTATED
  DISTANT METASTASIS                                                                                                 11
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           12
  REGIONAL LYMPH NODE                                                                                                35
                                                                                          clus
vv                                                                                         DEL PEAK 21(14Q32.2) WILD-TYPE
  DISTANT METASTASIS                                                                                                   14
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             23
  REGIONAL LYMPH NODE                                                                                                  77
D45V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 21(14Q32.2) MUTATED     21   37
  DEL PEAK 21(14Q32.2) WILD-TYPE   46   69
        clus
vv       DEL PEAK 21(14Q32.2) MUTATED DEL PEAK 21(14Q32.2) WILD-TYPE
  FEMALE                           21                             46
  MALE                             37                             69
                                vv
clus                             M0 M1 M1A M1B M1C
  DEL PEAK 21(14Q32.2) MUTATED   52  0   1   0   2
  DEL PEAK 21(14Q32.2) WILD-TYPE 98  2   1   2   0
D45V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 21(14Q32.2) MUTATED   33  1   4   6  0   1   1   3  6  0
  DEL PEAK 21(14Q32.2) WILD-TYPE 62  1   3  10  1   3  10   2 10  2
D45V6, multiclass
D45V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 21(14Q32.2) MUTATED             4       7        4        2        9
  DEL PEAK 21(14Q32.2) WILD-TYPE           0      10        6       12       10
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 21(14Q32.2) MUTATED           0         2         3         4
  DEL PEAK 21(14Q32.2) WILD-TYPE         8         8         5         5
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 21(14Q32.2) MUTATED            3          5          8        3
  DEL PEAK 21(14Q32.2) WILD-TYPE          3         13         15        3
D45V8, multiclass

Clustering(46) Variable = Del Peak 22(15q13.3) mutation analysis
D46V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 22(15Q13.3) MUTATED   17 22
  DEL PEAK 22(15Q13.3) WILD-TYPE 66 65
  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                            39                            131 
  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                            22                             65 
$`DEL PEAK 22(15Q13.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D9-A148 TCGA-D9-A1JX TCGA-DA-A1HV 
       16.57        58.03        71.24       148.31         6.38        48.89 
TCGA-DA-A1HW TCGA-DA-A1HY TCGA-DA-A1I1 TCGA-DA-A1I8 TCGA-EE-A17Z TCGA-EE-A29L 
       36.03       117.17       194.83        53.92         8.65         2.56 
TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A2A5 TCGA-EE-A2GP TCGA-EE-A2M5 TCGA-EE-A2MC 
       56.42        37.35        39.25        13.87        21.67        61.51 
TCGA-EE-A2MD TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MT 
       47.28        16.96       204.62       144.76       167.87        41.59 
TCGA-EE-A2MU TCGA-EE-A3AB TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z4 TCGA-FS-A1ZE 
       53.26       122.73        48.59       202.62        28.08        40.27 
TCGA-FS-A1ZG TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FW-A3I3 TCGA-FW-A3TU TCGA-GN-A264 
        9.70        23.93       101.26         0.20        47.54       117.93 
TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26D 
       10.09        64.41        39.58 

$`DEL PEAK 22(15Q13.3) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J6 
      112.54        71.80       121.22        28.08        31.59        43.40 
TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3CE 
       65.49        23.77        11.87        48.76        12.10        60.23 
TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A3Z1 
       24.53         9.30        21.47        49.74         2.70        11.34 
TCGA-D9-A3Z3 TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 
        3.22        20.38       176.55        35.93       107.34        61.18 
TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 
       65.92        23.44        68.09        28.60        10.49       215.44 
TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 
       15.68        29.82        33.73        14.70        26.86         4.93 
TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D 
      109.64        78.87       168.26        63.32        47.84        13.97 
TCGA-EE-A29E TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A29S 
       39.62        32.19        44.35        18.58        14.47        55.89 
TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 
      345.96        25.87        17.92        46.82        78.94        24.43 
TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       58.75        47.54        43.23       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GO TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
      101.95        14.30        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MJ TCGA-EE-A2ML 
       28.80        19.76       103.27       103.17        96.23       203.01 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A3AA 
       47.54       248.61        43.23       103.56       136.44         4.24 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH 
       25.84         3.68        26.73        13.81        23.47       138.77 
TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
       12.59        26.37         6.41       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW 
       79.99        80.32        33.21        80.48       160.60       216.92 
TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC 
      228.59        20.91         7.76        27.68        48.85       357.37 
TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZP TCGA-FS-A1ZQ 
       53.52        15.45        32.71        47.38        74.73       133.55 
TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
       11.41       148.77        53.16        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3R5 
       27.02        77.79        50.14        12.43        49.45        22.98 
TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26A 
       76.41       120.46        84.72        62.76        32.48 

  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                           0.2                            2.7 
  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                        204.62                         357.37 
  DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE 
                         47.54                          47.54 
[1] "0.2 - 204.6 (47.5)" "2.7 - 357.4 (47.5)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "DEL PEAK 22(15Q13.3) MUTATED"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 22(15Q13.3) WILD-TYPE" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 22(15Q13.3) MUTATED" "DEL PEAK 22(15Q13.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 22(15Q13.3) WILD-TYPE"   "DEL PEAK 22(15Q13.3) MUTATED" 
[1] "hr=" "1.2"
D46V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 22(15Q13.3) MUTATED                    5             0
  DEL PEAK 22(15Q13.3) WILD-TYPE                 20             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 22(15Q13.3) MUTATED                                                                                         10
  DEL PEAK 22(15Q13.3) WILD-TYPE                                                                                       25
                                vv
clus                             REGIONAL LYMPH NODE
  DEL PEAK 22(15Q13.3) MUTATED                    25
  DEL PEAK 22(15Q13.3) WILD-TYPE                  87
D46V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 22(15Q13.3) MUTATED
  DISTANT METASTASIS                                                                                                  5
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           10
  REGIONAL LYMPH NODE                                                                                                25
                                                                                          clus
vv                                                                                         DEL PEAK 22(15Q13.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   20
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             25
  REGIONAL LYMPH NODE                                                                                                  87
D46V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 22(15Q13.3) MUTATED     18   22
  DEL PEAK 22(15Q13.3) WILD-TYPE   49   84
        clus
vv       DEL PEAK 22(15Q13.3) MUTATED DEL PEAK 22(15Q13.3) WILD-TYPE
  FEMALE                           18                             49
  MALE                             22                             84
                                vv
clus                              M0  M1 M1A M1B M1C
  DEL PEAK 22(15Q13.3) MUTATED    33   1   0   1   0
  DEL PEAK 22(15Q13.3) WILD-TYPE 117   1   2   1   2
D46V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 22(15Q13.3) MUTATED   22  0   2   1  0   0   3   1  6  1
  DEL PEAK 22(15Q13.3) WILD-TYPE 73  2   5  15  1   4   8   4 10  1
D46V6, multiclass
D46V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 22(15Q13.3) MUTATED             0       5        2        3        4
  DEL PEAK 22(15Q13.3) WILD-TYPE           4      12        8       11       15
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 22(15Q13.3) MUTATED           0         3         4         2
  DEL PEAK 22(15Q13.3) WILD-TYPE         8         7         4         7
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 22(15Q13.3) MUTATED            1          3          6        1
  DEL PEAK 22(15Q13.3) WILD-TYPE          5         15         17        5
D46V8, multiclass

Clustering(47) Variable = Del Peak 23(15q15.3) mutation analysis
D47V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 23(15Q15.3) MUTATED   14 24
  DEL PEAK 23(15Q15.3) WILD-TYPE 69 63
  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                            38                            132 
  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                            24                             63 
$`DEL PEAK 23(15Q15.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D9-A148 TCGA-DA-A1HV TCGA-DA-A1HW 
       16.57        58.03        71.24       148.31        48.89        36.03 
TCGA-DA-A1I1 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 
      194.83        53.92        65.92         8.65        33.73        26.86 
TCGA-EE-A29L TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A2A5 TCGA-EE-A2M5 TCGA-EE-A2MC 
        2.56        56.42        37.35        39.25        21.67        61.51 
TCGA-EE-A2MD TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MU 
       47.28        16.96       204.62       144.76       167.87        53.26 
TCGA-EE-A3AB TCGA-ER-A19J TCGA-ER-A3ET TCGA-FS-A1YX TCGA-FS-A1Z0 TCGA-FS-A1Z4 
      122.73         6.41        80.32        48.59       202.62        28.08 
TCGA-FS-A1ZG TCGA-FS-A1ZM TCGA-FS-A1ZT TCGA-FW-A3TU TCGA-GN-A264 TCGA-GN-A266 
        9.70       101.26        53.16        47.54       117.93        10.09 
TCGA-GN-A267 TCGA-GN-A26D 
       64.41        39.58 

$`DEL PEAK 23(15Q15.3) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J6 
      112.54        71.80       121.22        28.08        31.59        43.40 
TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3CE 
       65.49        23.77        11.87        48.76        12.10        60.23 
TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A1JX 
       24.53         9.30        21.47        49.74         2.70         6.38 
TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I2 TCGA-DA-A1I4 
       11.34         3.22       117.17        20.38       176.55        35.93 
TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 
      107.34        61.18        23.44        68.09        28.60        10.49 
TCGA-DA-A3F5 TCGA-DA-A3F8 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A185 TCGA-EE-A20B 
      215.44        15.68        29.82        14.70         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29E 
       78.87       168.26        63.32        47.84        13.97        39.62 
TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       32.19        44.35        18.58        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 
       25.87        17.92        46.82        78.94        24.43        58.75 
TCGA-EE-A2GB TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       47.54        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GO 
       89.33        54.71        55.00        75.48        90.94       101.95 
TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
       13.87        14.30        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MJ TCGA-EE-A2ML 
       28.80        19.76       103.27       103.17        96.23       203.01 
TCGA-EE-A2MN TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT 
       47.54       248.61        43.23       103.56       136.44        41.59 
TCGA-EE-A3AA TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG 
        4.24        25.84         3.68        26.73        13.81        23.47 
TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N 
      138.77        12.59        26.37       131.08        61.05        44.05 
TCGA-ER-A1A1 TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YY 
       79.99        33.21        80.48       160.60       216.92       228.59 
TCGA-FS-A1Z3 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZD 
       20.91         7.76        27.68        48.85       357.37        53.52 
TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZP 
       40.27        15.45        32.71        47.38        23.93        74.73 
TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY 
      133.55        11.41       148.77        26.56        49.48        27.06 
TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 
       27.02        77.79        50.14        12.43        49.45         0.20 
TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A262 TCGA-GN-A265 TCGA-GN-A268 TCGA-GN-A26A 
       22.98        76.41       120.46        84.72        62.76        32.48 

  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                          2.56                           0.20 
  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                        204.62                         357.37 
  DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE 
                        51.025                         47.100 
[1] "2.6 - 204.6 (51.0)" "0.2 - 357.4 (47.1)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 23(15Q15.3) MUTATED"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 23(15Q15.3) WILD-TYPE" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 23(15Q15.3) MUTATED" "DEL PEAK 23(15Q15.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 23(15Q15.3) WILD-TYPE"   "DEL PEAK 23(15Q15.3) MUTATED" 
[1] "hr=" "1.3"
D47V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 23(15Q15.3) MUTATED                    4             0
  DEL PEAK 23(15Q15.3) WILD-TYPE                 21             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 23(15Q15.3) MUTATED                                                                                         10
  DEL PEAK 23(15Q15.3) WILD-TYPE                                                                                       25
                                vv
clus                             REGIONAL LYMPH NODE
  DEL PEAK 23(15Q15.3) MUTATED                    25
  DEL PEAK 23(15Q15.3) WILD-TYPE                  87
D47V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 23(15Q15.3) MUTATED
  DISTANT METASTASIS                                                                                                  4
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                           10
  REGIONAL LYMPH NODE                                                                                                25
                                                                                          clus
vv                                                                                         DEL PEAK 23(15Q15.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   21
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             25
  REGIONAL LYMPH NODE                                                                                                  87
D47V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 23(15Q15.3) MUTATED     19   20
  DEL PEAK 23(15Q15.3) WILD-TYPE   48   86
        clus
vv       DEL PEAK 23(15Q15.3) MUTATED DEL PEAK 23(15Q15.3) WILD-TYPE
  FEMALE                           19                             48
  MALE                             20                             86
                                vv
clus                              M0  M1 M1A M1B M1C
  DEL PEAK 23(15Q15.3) MUTATED    32   1   0   1   0
  DEL PEAK 23(15Q15.3) WILD-TYPE 118   1   2   1   2
D47V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 23(15Q15.3) MUTATED   20  0   2   3  0   0   3   1  6  0
  DEL PEAK 23(15Q15.3) WILD-TYPE 75  2   5  13  1   4   8   4 10  2
D47V6, multiclass
D47V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 23(15Q15.3) MUTATED             0       6        2        2        4
  DEL PEAK 23(15Q15.3) WILD-TYPE           4      11        8       12       15
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 23(15Q15.3) MUTATED           0         3         3         3
  DEL PEAK 23(15Q15.3) WILD-TYPE         8         7         5         6
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 23(15Q15.3) MUTATED            2          3          5        1
  DEL PEAK 23(15Q15.3) WILD-TYPE          4         15         18        5
D47V8, multiclass

Clustering(48) Variable = Del Peak 24(16p13.3) mutation analysis
D48V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 24(16P13.3) MUTATED   15 16
  DEL PEAK 24(16P13.3) WILD-TYPE 68 71
  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                            31                            139 
  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                            16                             71 
$`DEL PEAK 24(16P13.3) MUTATED`
TCGA-D3-A1Q5 TCGA-D3-A1Q9 TCGA-D3-A3CC TCGA-DA-A1HW TCGA-DA-A1I2 TCGA-EE-A181 
      112.54        31.59        71.24        36.03       176.55        33.73 
TCGA-EE-A29D TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2GC 
       13.97         2.56        44.35        17.92        46.82        43.23 
TCGA-EE-A2GO TCGA-EE-A2GU TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2MK TCGA-EE-A2MM 
      101.95        67.13        21.67       129.24       144.76       167.87 
TCGA-EE-A2MQ TCGA-EE-A2MU TCGA-EE-A3AB TCGA-FS-A1Z0 TCGA-FS-A1ZD TCGA-FS-A1ZT 
       43.23        53.26       122.73       202.62        53.52        53.16 
TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A267 
       26.56        49.48        22.98        47.54       120.46        64.41 
TCGA-GN-A26D 
       39.58 

$`DEL PEAK 24(16P13.3) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J6 TCGA-D3-A2J8 
       16.57        71.80       121.22        28.08        43.40        65.49 
TCGA-D3-A2J9 TCGA-D3-A2JD TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CE 
       23.77        11.87        48.76        12.10        58.03        60.23 
TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW 
       24.53         9.30        21.47       148.31        49.74         2.70 
TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 
        6.38        11.34         3.22        48.89       117.17        20.38 
TCGA-DA-A1I1 TCGA-DA-A1I4 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
      194.83        35.93       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-DA-A3F8 
       23.44        68.09        28.60        10.49       215.44        15.68 
TCGA-EE-A17X TCGA-EE-A17Z TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A185 TCGA-EE-A20B 
       29.82         8.65        14.70        26.86         4.93       109.64 
TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29H 
       78.87       168.26        63.32        47.84        39.62        32.19 
TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T 
       18.58        56.42        37.35        14.47        55.89       345.96 
TCGA-EE-A29V TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A5 TCGA-EE-A2A6 TCGA-EE-A2GB 
       25.87        78.94        24.43        39.25        58.75        47.54 
TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK 
      314.53       135.91       182.01        22.55        89.33        54.71 
TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN TCGA-EE-A2GP TCGA-EE-A2GR TCGA-EE-A2GS 
       55.00        75.48        90.94        13.87        14.30        55.59 
TCGA-EE-A2GT TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME 
       19.56        28.80        19.76        61.51        47.28       103.27 
TCGA-EE-A2MG TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2ML TCGA-EE-A2MN 
      103.17        16.96       204.62        96.23       203.01        47.54 
TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AA TCGA-EE-A3AC 
      248.61       103.56       136.44        41.59         4.24        25.84 
TCGA-EE-A3AD TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        3.68        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A19N TCGA-ER-A1A1 
       26.37         6.41       131.08        61.05        44.05        79.99 
TCGA-ER-A3ET TCGA-ER-A3PL TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX 
       80.32        33.21        80.48       160.60       216.92        48.59 
TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB 
      228.59        20.91        28.08         7.76        27.68        48.85 
TCGA-FS-A1ZC TCGA-FS-A1ZE TCGA-FS-A1ZF TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZJ 
      357.37        40.27        15.45         9.70        32.71        47.38 
TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS 
       23.93       101.26        74.73       133.55        11.41       148.77 
TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 TCGA-FS-A4F9 TCGA-FS-A4FC 
       27.06        27.02        77.79        50.14        12.43        49.45 
TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A268 
        0.20        76.41       117.93        84.72        10.09        62.76 
TCGA-GN-A26A 
       32.48 

  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                          2.56                           0.20 
  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                        202.62                         357.37 
  DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE 
                         49.48                          47.54 
[1] "2.6 - 202.6 (49.5)" "0.2 - 357.4 (47.5)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 24(16P13.3) MUTATED"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 24(16P13.3) WILD-TYPE" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 24(16P13.3) MUTATED" "DEL PEAK 24(16P13.3) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 24(16P13.3) WILD-TYPE"   "DEL PEAK 24(16P13.3) MUTATED" 
[1] "hr=" "1.1"
D48V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 24(16P13.3) MUTATED                    5             1
  DEL PEAK 24(16P13.3) WILD-TYPE                 20             0
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 24(16P13.3) MUTATED                                                                                          4
  DEL PEAK 24(16P13.3) WILD-TYPE                                                                                       31
                                vv
clus                             REGIONAL LYMPH NODE
  DEL PEAK 24(16P13.3) MUTATED                    22
  DEL PEAK 24(16P13.3) WILD-TYPE                  90
D48V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 24(16P13.3) MUTATED
  DISTANT METASTASIS                                                                                                  5
  PRIMARY TUMOR                                                                                                       1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            4
  REGIONAL LYMPH NODE                                                                                                22
                                                                                          clus
vv                                                                                         DEL PEAK 24(16P13.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   20
  PRIMARY TUMOR                                                                                                         0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             31
  REGIONAL LYMPH NODE                                                                                                  90
D48V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 24(16P13.3) MUTATED     17   15
  DEL PEAK 24(16P13.3) WILD-TYPE   50   91
        clus
vv       DEL PEAK 24(16P13.3) MUTATED DEL PEAK 24(16P13.3) WILD-TYPE
  FEMALE                           17                             50
  MALE                             15                             91
                                vv
clus                              M0  M1 M1A M1B M1C
  DEL PEAK 24(16P13.3) MUTATED    28   0   0   0   0
  DEL PEAK 24(16P13.3) WILD-TYPE 122   2   2   2   2
D48V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 24(16P13.3) MUTATED   19  0   2   3  1   2   1   0  1  0
  DEL PEAK 24(16P13.3) WILD-TYPE 76  2   5  13  0   2  10   5 15  2
D48V6, multiclass
D48V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 24(16P13.3) MUTATED             2       3        3        2        3
  DEL PEAK 24(16P13.3) WILD-TYPE           2      14        7       12       16
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 24(16P13.3) MUTATED           2         1         3         2
  DEL PEAK 24(16P13.3) WILD-TYPE         6         9         5         7
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 24(16P13.3) MUTATED            2          3          3        0
  DEL PEAK 24(16P13.3) WILD-TYPE          4         15         20        6
D48V8, multiclass

Clustering(49) Variable = Del Peak 25(16q12.1) mutation analysis
D49V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 25(16Q12.1) MUTATED   26 31
  DEL PEAK 25(16Q12.1) WILD-TYPE 57 56
  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                            57                            113 
  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                            31                             56 
$`DEL PEAK 25(16Q12.1) MUTATED`
TCGA-D3-A1Q5 TCGA-D3-A1Q7 TCGA-D3-A2J6 TCGA-D3-A2JF TCGA-D3-A3CC TCGA-D9-A148 
      112.54       121.22        43.40        48.76        71.24       148.31 
TCGA-D9-A149 TCGA-D9-A3Z3 TCGA-DA-A1HW TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A3F5 
       49.74         3.22        36.03       176.55        35.93       215.44 
TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A185 TCGA-EE-A29C TCGA-EE-A29D 
       15.68         8.65        33.73         4.93        47.84        13.97 
TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29N TCGA-EE-A29P TCGA-EE-A29X TCGA-EE-A2A0 
        2.56        44.35        18.58        56.42        17.92        46.82 
TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2M5 TCGA-EE-A2MD 
       39.25        43.23       101.95        13.87        21.67        47.28 
TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MQ TCGA-EE-A2MS 
       96.23       144.76       167.87        47.54        43.23       136.44 
TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AE TCGA-EE-A3AF TCGA-ER-A19N TCGA-FS-A1Z0 
       53.26       122.73        26.73        13.81        44.05       202.62 
TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZF TCGA-FS-A1ZP TCGA-FS-A1ZT TCGA-FS-A1ZU 
       27.68        48.85        15.45        74.73        53.16        26.56 
TCGA-FS-A1ZW TCGA-FS-A4F2 TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A262 
       49.48        50.14         0.20        22.98        47.54       120.46 
TCGA-GN-A264 TCGA-GN-A267 TCGA-GN-A26D 
      117.93        64.41        39.58 

$`DEL PEAK 25(16Q12.1) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q6 TCGA-D3-A1Q8 TCGA-D3-A1Q9 TCGA-D3-A2J8 TCGA-D3-A2J9 
       16.57        71.80        28.08        31.59        65.49        23.77 
TCGA-D3-A2JD TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CE TCGA-D3-A3CF TCGA-D3-A3MO 
       11.87        12.10        58.03        60.23        24.53         9.30 
TCGA-D3-A3MV TCGA-D9-A1JW TCGA-D9-A1JX TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1HY 
       21.47         2.70         6.38        11.34        48.89       117.17 
TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I5 TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA 
       20.38       194.83       107.34        61.18        53.92        65.92 
TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 TCGA-DA-A3F3 TCGA-EE-A17X TCGA-EE-A182 
       23.44        68.09        28.60        10.49        29.82        14.70 
TCGA-EE-A183 TCGA-EE-A20B TCGA-EE-A20F TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29E 
       26.86       109.64        78.87       168.26        63.32        39.62 
TCGA-EE-A29H TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V 
       32.19        37.35        14.47        55.89       345.96        25.87 
TCGA-EE-A2A1 TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE 
       78.94        24.43        58.75        47.54       314.53       135.91 
TCGA-EE-A2GH TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM 
      182.01        22.55        89.33        54.71        55.00        75.48 
TCGA-EE-A2GN TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 
       90.94        14.30        55.59        19.56        67.13       129.24 
TCGA-EE-A2M7 TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MG TCGA-EE-A2MH 
       28.80        19.76        61.51       103.27       103.17        16.96 
TCGA-EE-A2MI TCGA-EE-A2ML TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A2MT TCGA-EE-A3AA 
      204.62       203.01       248.61       103.56        41.59         4.24 
TCGA-EE-A3AC TCGA-EE-A3AD TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19F 
       25.84         3.68        23.47       138.77        12.59        26.37 
TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19M TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-ER-A3PL 
        6.41       131.08        61.05        79.99        80.32        33.21 
TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z3 
       80.48       160.60       216.92        48.59       228.59        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG 
       28.08         7.76       357.37        53.52        40.27         9.70 
TCGA-FS-A1ZH TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-FS-A1ZR 
       32.71        47.38        23.93       101.26       133.55        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F9 TCGA-FS-A4FC 
      148.77        27.06        27.02        77.79        12.43        49.45 
TCGA-GN-A261 TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A268 TCGA-GN-A26A 
       76.41        84.72        10.09        62.76        32.48 

  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                           0.2                            2.7 
  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                        215.44                         357.37 
  DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE 
                         47.28                          48.89 
[1] "0.2 - 215.4 (47.3)" "2.7 - 357.4 (48.9)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 25(16Q12.1) MUTATED"   "DEL PEAK 25(16Q12.1) MUTATED" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 25(16Q12.1) WILD-TYPE" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 25(16Q12.1) MUTATED" "DEL PEAK 25(16Q12.1) WILD-TYPE" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 25(16Q12.1) WILD-TYPE"   "DEL PEAK 25(16Q12.1) MUTATED" 
[1] "hr=" "1.2"
D49V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 25(16Q12.1) MUTATED                   11             1
  DEL PEAK 25(16Q12.1) WILD-TYPE                 14             0
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 25(16Q12.1) MUTATED                                                                                          8
  DEL PEAK 25(16Q12.1) WILD-TYPE                                                                                       27
                                vv
clus                             REGIONAL LYMPH NODE
  DEL PEAK 25(16Q12.1) MUTATED                    38
  DEL PEAK 25(16Q12.1) WILD-TYPE                  74
D49V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 25(16Q12.1) MUTATED
  DISTANT METASTASIS                                                                                                 11
  PRIMARY TUMOR                                                                                                       1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            8
  REGIONAL LYMPH NODE                                                                                                38
                                                                                          clus
vv                                                                                         DEL PEAK 25(16Q12.1) WILD-TYPE
  DISTANT METASTASIS                                                                                                   14
  PRIMARY TUMOR                                                                                                         0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             27
  REGIONAL LYMPH NODE                                                                                                  74
D49V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 25(16Q12.1) MUTATED     26   32
  DEL PEAK 25(16Q12.1) WILD-TYPE   41   74
        clus
vv       DEL PEAK 25(16Q12.1) MUTATED DEL PEAK 25(16Q12.1) WILD-TYPE
  FEMALE                           26                             41
  MALE                             32                             74
                                vv
clus                              M0  M1 M1A M1B M1C
  DEL PEAK 25(16Q12.1) MUTATED    49   1   0   1   0
  DEL PEAK 25(16Q12.1) WILD-TYPE 101   1   2   1   2
D49V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 25(16Q12.1) MUTATED   34  0   3   5  1   1   3   1  4  0
  DEL PEAK 25(16Q12.1) WILD-TYPE 61  2   4  11  0   3   8   4 12  2
D49V6, multiclass
D49V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 25(16Q12.1) MUTATED             2       3        4        5        8
  DEL PEAK 25(16Q12.1) WILD-TYPE           2      14        6        9       11
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 25(16Q12.1) MUTATED           1         3         6         2
  DEL PEAK 25(16Q12.1) WILD-TYPE         7         7         2         7
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 25(16Q12.1) MUTATED            2          7          5        1
  DEL PEAK 25(16Q12.1) WILD-TYPE          4         11         18        5
D49V8, multiclass

Clustering(50) Variable = Del Peak 26(16q24.3) mutation analysis
D50V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 26(16Q24.3) MUTATED   25 35
  DEL PEAK 26(16Q24.3) WILD-TYPE 58 52
  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                            60                            110 
  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                            35                             52 
$`DEL PEAK 26(16Q24.3) MUTATED`
TCGA-D3-A1Q5 TCGA-D3-A1Q7 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2JF TCGA-D3-A3CC 
      112.54       121.22        31.59        43.40        48.76        71.24 
TCGA-D3-A3CE TCGA-D9-A148 TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A3Z3 TCGA-DA-A1HW 
       60.23       148.31        49.74         2.70         3.22        36.03 
TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A183 
      176.55        35.93        15.68         8.65        33.73        26.86 
TCGA-EE-A185 TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29M TCGA-EE-A29P TCGA-EE-A29X 
        4.93        13.97        32.19        44.35        56.42        17.92 
TCGA-EE-A2A0 TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GO TCGA-EE-A2GP TCGA-EE-A2M5 
       46.82        39.25        43.23       101.95        13.87        21.67 
TCGA-EE-A2MD TCGA-EE-A2MG TCGA-EE-A2MI TCGA-EE-A2MJ TCGA-EE-A2MK TCGA-EE-A2MM 
       47.28       103.17       204.62        96.23       144.76       167.87 
TCGA-EE-A2MQ TCGA-EE-A2MU TCGA-EE-A3AB TCGA-EE-A3AE TCGA-EE-A3AF TCGA-ER-A19F 
       43.23        53.26       122.73        26.73        13.81        26.37 
TCGA-ER-A19N TCGA-ER-A3PL TCGA-FS-A1Z0 TCGA-FS-A1ZB TCGA-FS-A1ZF TCGA-FS-A1ZJ 
       44.05        33.21       202.62        48.85        15.45        47.38 
TCGA-FS-A1ZP TCGA-FS-A1ZT TCGA-FS-A1ZU TCGA-FS-A1ZW TCGA-FS-A1ZY TCGA-FS-A4F2 
       74.73        53.16        26.56        49.48        27.06        50.14 
TCGA-FW-A3R5 TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A267 TCGA-GN-A268 TCGA-GN-A26D 
       22.98        47.54       120.46        64.41        62.76        39.58 

$`DEL PEAK 26(16Q24.3) WILD-TYPE`
TCGA-D3-A1Q1 TCGA-D3-A1Q6 TCGA-D3-A1Q8 TCGA-D3-A2J8 TCGA-D3-A2J9 TCGA-D3-A2JD 
       16.57        71.80        28.08        65.49        23.77        11.87 
TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CF TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A1JX 
       12.10        58.03        24.53         9.30        21.47         6.38 
TCGA-D9-A3Z1 TCGA-DA-A1HV TCGA-DA-A1HY TCGA-DA-A1I0 TCGA-DA-A1I1 TCGA-DA-A1I5 
       11.34        48.89       117.17        20.38       194.83       107.34 
TCGA-DA-A1I7 TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IB TCGA-DA-A1IC TCGA-DA-A3F2 
       61.18        53.92        65.92        23.44        68.09        28.60 
TCGA-DA-A3F3 TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A182 TCGA-EE-A20B TCGA-EE-A20F 
       10.49       215.44        29.82        14.70       109.64        78.87 
TCGA-EE-A20H TCGA-EE-A29A TCGA-EE-A29C TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29N 
      168.26        63.32        47.84        39.62         2.56        18.58 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A29V TCGA-EE-A2A1 
       37.35        14.47        55.89       345.96        25.87        78.94 
TCGA-EE-A2A2 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH 
       24.43        58.75        47.54       314.53       135.91       182.01 
TCGA-EE-A2GI TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GM TCGA-EE-A2GN 
       22.55        89.33        54.71        55.00        75.48        90.94 
TCGA-EE-A2GR TCGA-EE-A2GS TCGA-EE-A2GT TCGA-EE-A2GU TCGA-EE-A2M6 TCGA-EE-A2M7 
       14.30        55.59        19.56        67.13       129.24        28.80 
TCGA-EE-A2M8 TCGA-EE-A2MC TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2ML TCGA-EE-A2MN 
       19.76        61.51       103.27        16.96       203.01        47.54 
TCGA-EE-A2MP TCGA-EE-A2MR TCGA-EE-A2MS TCGA-EE-A2MT TCGA-EE-A3AA TCGA-EE-A3AC 
      248.61       103.56       136.44        41.59         4.24        25.84 
TCGA-EE-A3AD TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D TCGA-ER-A19J TCGA-ER-A19L 
        3.68        23.47       138.77        12.59         6.41       131.08 
TCGA-ER-A19M TCGA-ER-A1A1 TCGA-ER-A3ET TCGA-FR-A3YN TCGA-FR-A44A TCGA-FS-A1YW 
       61.05        79.99        80.32        80.48       160.60       216.92 
TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z3 TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA 
       48.59       228.59        20.91        28.08         7.76        27.68 
TCGA-FS-A1ZC TCGA-FS-A1ZD TCGA-FS-A1ZE TCGA-FS-A1ZG TCGA-FS-A1ZH TCGA-FS-A1ZK 
      357.37        53.52        40.27         9.70        32.71        23.93 
TCGA-FS-A1ZM TCGA-FS-A1ZQ TCGA-FS-A1ZR TCGA-FS-A1ZS TCGA-FS-A1ZZ TCGA-FS-A4F0 
      101.26       133.55        11.41       148.77        27.02        77.79 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-GN-A261 TCGA-GN-A264 TCGA-GN-A265 
       12.43        49.45         0.20        76.41       117.93        84.72 
TCGA-GN-A266 TCGA-GN-A26A 
       10.09        32.48 

  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                           2.7                            0.2 
  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                        204.62                         357.37 
  DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE 
                        45.585                         49.170 
[1] "2.7 - 204.6 (45.6)" "0.2 - 357.4 (49.2)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 26(16Q24.3) MUTATED" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 26(16Q24.3) WILD-TYPE" "DEL PEAK 26(16Q24.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
  "DEL PEAK 26(16Q24.3) MUTATED"   "DEL PEAK 26(16Q24.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 26(16Q24.3) WILD-TYPE"   "DEL PEAK 26(16Q24.3) MUTATED" 
[1] "hr=" "1.4"
D50V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 26(16Q24.3) MUTATED                   10             1
  DEL PEAK 26(16Q24.3) WILD-TYPE                 15             0
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 26(16Q24.3) MUTATED                                                                                          9
  DEL PEAK 26(16Q24.3) WILD-TYPE                                                                                       26
                                vv
clus                             REGIONAL LYMPH NODE
  DEL PEAK 26(16Q24.3) MUTATED                    42
  DEL PEAK 26(16Q24.3) WILD-TYPE                  70
D50V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 26(16Q24.3) MUTATED
  DISTANT METASTASIS                                                                                                 10
  PRIMARY TUMOR                                                                                                       1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            9
  REGIONAL LYMPH NODE                                                                                                42
                                                                                          clus
vv                                                                                         DEL PEAK 26(16Q24.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   15
  PRIMARY TUMOR                                                                                                         0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             26
  REGIONAL LYMPH NODE                                                                                                  70
D50V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 26(16Q24.3) MUTATED     28   34
  DEL PEAK 26(16Q24.3) WILD-TYPE   39   72
        clus
vv       DEL PEAK 26(16Q24.3) MUTATED DEL PEAK 26(16Q24.3) WILD-TYPE
  FEMALE                           28                             39
  MALE                             34                             72
                                vv
clus                             M0 M1 M1A M1B M1C
  DEL PEAK 26(16Q24.3) MUTATED   54  0   1   1   0
  DEL PEAK 26(16Q24.3) WILD-TYPE 96  2   1   1   2
D50V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 26(16Q24.3) MUTATED   38  0   3   7  1   3   3   0  2  0
  DEL PEAK 26(16Q24.3) WILD-TYPE 57  2   4   9  0   1   8   5 14  2
D50V6, multiclass
D50V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 26(16Q24.3) MUTATED             2       5        5        4        7
  DEL PEAK 26(16Q24.3) WILD-TYPE           2      12        5       10       12
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 26(16Q24.3) MUTATED           1         6         6         3
  DEL PEAK 26(16Q24.3) WILD-TYPE         7         4         2         6
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 26(16Q24.3) MUTATED            2          8          3        1
  DEL PEAK 26(16Q24.3) WILD-TYPE          4         10         20        5
D50V8, multiclass

Clustering(51) Variable = Del Peak 27(19p13.3) mutation analysis
D51V1, survival
                                sevent
clus2                             0  1
  DEL PEAK 27(19P13.3) MUTATED   26 25
  DEL PEAK 27(19P13.3) WILD-TYPE 57 62
  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                            51                            119 
  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                            25                             62 
$`DEL PEAK 27(19P13.3) MUTATED`
TCGA-D3-A1Q1 TCGA-D3-A1Q9 TCGA-D3-A2J6 TCGA-D3-A2JD TCGA-D9-A148 TCGA-D9-A1JX 
       16.57        31.59        43.40        11.87       148.31         6.38 
TCGA-D9-A3Z3 TCGA-DA-A1HV TCGA-DA-A1HW TCGA-DA-A1I0 TCGA-DA-A1I5 TCGA-DA-A1I7 
        3.22        48.89        36.03        20.38       107.34        61.18 
TCGA-DA-A1I8 TCGA-DA-A1IA TCGA-DA-A1IC TCGA-DA-A3F5 TCGA-EE-A17X TCGA-EE-A185 
       53.92        65.92        68.09       215.44        29.82         4.93 
TCGA-EE-A20H TCGA-EE-A29C TCGA-EE-A29D TCGA-EE-A29H TCGA-EE-A29N TCGA-EE-A29V 
      168.26        47.84        13.97        32.19        18.58        25.87 
TCGA-EE-A29X TCGA-EE-A2A0 TCGA-EE-A2A6 TCGA-EE-A2GB TCGA-EE-A2GM TCGA-EE-A2GS 
       17.92        46.82        58.75        47.54        75.48        55.59 
TCGA-EE-A2GU TCGA-EE-A2MG TCGA-EE-A2MP TCGA-EE-A2MQ TCGA-EE-A2MS TCGA-EE-A2MT 
       67.13       103.17       248.61        43.23       136.44        41.59 
TCGA-EE-A3AB TCGA-EE-A3AC TCGA-EE-A3AD TCGA-ER-A19M TCGA-FR-A3YN TCGA-FR-A44A 
      122.73        25.84         3.68        61.05        80.48       160.60 
TCGA-FS-A1ZD TCGA-FS-A1ZF TCGA-FS-A1ZH TCGA-FS-A1ZQ TCGA-FS-A1ZT TCGA-FS-A1ZW 
       53.52        15.45        32.71       133.55        53.16        49.48 
TCGA-FW-A3TU TCGA-GN-A262 TCGA-GN-A268 
       47.54       120.46        62.76 

$`DEL PEAK 27(19P13.3) WILD-TYPE`
TCGA-D3-A1Q5 TCGA-D3-A1Q6 TCGA-D3-A1Q7 TCGA-D3-A1Q8 TCGA-D3-A2J8 TCGA-D3-A2J9 
      112.54        71.80       121.22        28.08        65.49        23.77 
TCGA-D3-A2JF TCGA-D3-A2JK TCGA-D3-A3C6 TCGA-D3-A3CC TCGA-D3-A3CE TCGA-D3-A3CF 
       48.76        12.10        58.03        71.24        60.23        24.53 
TCGA-D3-A3MO TCGA-D3-A3MV TCGA-D9-A149 TCGA-D9-A1JW TCGA-D9-A3Z1 TCGA-DA-A1HY 
        9.30        21.47        49.74         2.70        11.34       117.17 
TCGA-DA-A1I1 TCGA-DA-A1I2 TCGA-DA-A1I4 TCGA-DA-A1IB TCGA-DA-A3F2 TCGA-DA-A3F3 
      194.83       176.55        35.93        23.44        28.60        10.49 
TCGA-DA-A3F8 TCGA-EE-A17Z TCGA-EE-A181 TCGA-EE-A182 TCGA-EE-A183 TCGA-EE-A20B 
       15.68         8.65        33.73        14.70        26.86       109.64 
TCGA-EE-A20F TCGA-EE-A29A TCGA-EE-A29E TCGA-EE-A29L TCGA-EE-A29M TCGA-EE-A29P 
       78.87        63.32        39.62         2.56        44.35        56.42 
TCGA-EE-A29Q TCGA-EE-A29R TCGA-EE-A29S TCGA-EE-A29T TCGA-EE-A2A1 TCGA-EE-A2A2 
       37.35        14.47        55.89       345.96        78.94        24.43 
TCGA-EE-A2A5 TCGA-EE-A2GC TCGA-EE-A2GD TCGA-EE-A2GE TCGA-EE-A2GH TCGA-EE-A2GI 
       39.25        43.23       314.53       135.91       182.01        22.55 
TCGA-EE-A2GJ TCGA-EE-A2GK TCGA-EE-A2GL TCGA-EE-A2GN TCGA-EE-A2GO TCGA-EE-A2GP 
       89.33        54.71        55.00        90.94       101.95        13.87 
TCGA-EE-A2GR TCGA-EE-A2GT TCGA-EE-A2M5 TCGA-EE-A2M6 TCGA-EE-A2M7 TCGA-EE-A2M8 
       14.30        19.56        21.67       129.24        28.80        19.76 
TCGA-EE-A2MC TCGA-EE-A2MD TCGA-EE-A2ME TCGA-EE-A2MH TCGA-EE-A2MI TCGA-EE-A2MJ 
       61.51        47.28       103.27        16.96       204.62        96.23 
TCGA-EE-A2MK TCGA-EE-A2ML TCGA-EE-A2MM TCGA-EE-A2MN TCGA-EE-A2MR TCGA-EE-A2MU 
      144.76       203.01       167.87        47.54       103.56        53.26 
TCGA-EE-A3AA TCGA-EE-A3AE TCGA-EE-A3AF TCGA-EE-A3AG TCGA-EE-A3AH TCGA-ER-A19D 
        4.24        26.73        13.81        23.47       138.77        12.59 
TCGA-ER-A19F TCGA-ER-A19J TCGA-ER-A19L TCGA-ER-A19N TCGA-ER-A1A1 TCGA-ER-A3ET 
       26.37         6.41       131.08        44.05        79.99        80.32 
TCGA-ER-A3PL TCGA-FS-A1YW TCGA-FS-A1YX TCGA-FS-A1YY TCGA-FS-A1Z0 TCGA-FS-A1Z3 
       33.21       216.92        48.59       228.59       202.62        20.91 
TCGA-FS-A1Z4 TCGA-FS-A1Z7 TCGA-FS-A1ZA TCGA-FS-A1ZB TCGA-FS-A1ZC TCGA-FS-A1ZE 
       28.08         7.76        27.68        48.85       357.37        40.27 
TCGA-FS-A1ZG TCGA-FS-A1ZJ TCGA-FS-A1ZK TCGA-FS-A1ZM TCGA-FS-A1ZP TCGA-FS-A1ZR 
        9.70        47.38        23.93       101.26        74.73        11.41 
TCGA-FS-A1ZS TCGA-FS-A1ZU TCGA-FS-A1ZY TCGA-FS-A1ZZ TCGA-FS-A4F0 TCGA-FS-A4F2 
      148.77        26.56        27.06        27.02        77.79        50.14 
TCGA-FS-A4F9 TCGA-FS-A4FC TCGA-FW-A3I3 TCGA-FW-A3R5 TCGA-GN-A261 TCGA-GN-A264 
       12.43        49.45         0.20        22.98        76.41       117.93 
TCGA-GN-A265 TCGA-GN-A266 TCGA-GN-A267 TCGA-GN-A26A TCGA-GN-A26D 
       84.72        10.09        64.41        32.48        39.58 

  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                          3.22                           0.20 
  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                        248.61                         357.37 
  DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE 
                         48.89                          47.28 
[1] "3.2 - 248.6 (48.9)" "0.2 - 357.4 (47.3)"
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q1                     TCGA-D3-A1Q5 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q6                     TCGA-D3-A1Q7 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A1Q8                     TCGA-D3-A1Q9 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-D3-A2J6                     TCGA-D3-A2J8 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A2J9                     TCGA-D3-A2JD 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-D3-A2JF                     TCGA-D3-A2JK 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3C6                     TCGA-D3-A3CC 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3CE                     TCGA-D3-A3CF 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D3-A3MO                     TCGA-D3-A3MV 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D9-A148                     TCGA-D9-A149 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-D9-A1JW                     TCGA-D9-A1JX 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-D9-A3Z1                     TCGA-D9-A3Z3 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1HV                     TCGA-DA-A1HW 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1HY                     TCGA-DA-A1I0 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1I1                     TCGA-DA-A1I2 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1I4                     TCGA-DA-A1I5 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1I7                     TCGA-DA-A1I8 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A1IA                     TCGA-DA-A1IB 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A1IC                     TCGA-DA-A3F2 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-DA-A3F3                     TCGA-DA-A3F5 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-DA-A3F8                     TCGA-EE-A17X 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A17Z                     TCGA-EE-A181 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A182                     TCGA-EE-A183 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A185                     TCGA-EE-A20B 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A20F                     TCGA-EE-A20H 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29A                     TCGA-EE-A29C 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29D                     TCGA-EE-A29E 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29H                     TCGA-EE-A29L 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29M                     TCGA-EE-A29N 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29P                     TCGA-EE-A29Q 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29R                     TCGA-EE-A29S 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A29T                     TCGA-EE-A29V 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A29X                     TCGA-EE-A2A0 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2A1                     TCGA-EE-A2A2 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2A5                     TCGA-EE-A2A6 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2GB                     TCGA-EE-A2GC 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GD                     TCGA-EE-A2GE 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GH                     TCGA-EE-A2GI 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GJ                     TCGA-EE-A2GK 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GL                     TCGA-EE-A2GM 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2GN                     TCGA-EE-A2GO 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GP                     TCGA-EE-A2GR 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GS                     TCGA-EE-A2GT 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2GU                     TCGA-EE-A2M5 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2M6                     TCGA-EE-A2M7 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2M8                     TCGA-EE-A2MC 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MD                     TCGA-EE-A2ME 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MG                     TCGA-EE-A2MH 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MI                     TCGA-EE-A2MJ 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MK                     TCGA-EE-A2ML 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MM                     TCGA-EE-A2MN 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A2MP                     TCGA-EE-A2MQ 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MR                     TCGA-EE-A2MS 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A2MT                     TCGA-EE-A2MU 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AA                     TCGA-EE-A3AB 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A3AC                     TCGA-EE-A3AD 
  "DEL PEAK 27(19P13.3) MUTATED"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-EE-A3AE                     TCGA-EE-A3AF 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-EE-A3AG                     TCGA-EE-A3AH 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19D                     TCGA-ER-A19F 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19J                     TCGA-ER-A19L 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A19M                     TCGA-ER-A19N 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A1A1                     TCGA-ER-A3ET 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-ER-A3PL                     TCGA-FR-A3YN 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FR-A44A                     TCGA-FS-A1YW 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1YX                     TCGA-FS-A1YY 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z0                     TCGA-FS-A1Z3 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1Z4                     TCGA-FS-A1Z7 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZA                     TCGA-FS-A1ZB 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZC                     TCGA-FS-A1ZD 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZE                     TCGA-FS-A1ZF 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZG                     TCGA-FS-A1ZH 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZJ                     TCGA-FS-A1ZK 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZM                     TCGA-FS-A1ZP 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZQ                     TCGA-FS-A1ZR 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A1ZS                     TCGA-FS-A1ZT 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZU                     TCGA-FS-A1ZW 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-FS-A1ZY                     TCGA-FS-A1ZZ 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A4F0                     TCGA-FS-A4F2 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FS-A4F9                     TCGA-FS-A4FC 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FW-A3I3                     TCGA-FW-A3R5 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-FW-A3TU                     TCGA-GN-A261 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A262                     TCGA-GN-A264 
  "DEL PEAK 27(19P13.3) MUTATED" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A265                     TCGA-GN-A266 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
                    TCGA-GN-A267                     TCGA-GN-A268 
"DEL PEAK 27(19P13.3) WILD-TYPE"   "DEL PEAK 27(19P13.3) MUTATED" 
                    TCGA-GN-A26A                     TCGA-GN-A26D 
"DEL PEAK 27(19P13.3) WILD-TYPE" "DEL PEAK 27(19P13.3) WILD-TYPE" 
[1] "hr=" "1"  
D51V2, continuous
                                vv
clus                             DISTANT METASTASIS PRIMARY TUMOR
  DEL PEAK 27(19P13.3) MUTATED                    9             0
  DEL PEAK 27(19P13.3) WILD-TYPE                 16             1
                                vv
clus                             REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)
  DEL PEAK 27(19P13.3) MUTATED                                                                                          6
  DEL PEAK 27(19P13.3) WILD-TYPE                                                                                       29
                                vv
clus                             REGIONAL LYMPH NODE
  DEL PEAK 27(19P13.3) MUTATED                    38
  DEL PEAK 27(19P13.3) WILD-TYPE                  74
D51V3, multiclass
                                                                                          clus
vv                                                                                         DEL PEAK 27(19P13.3) MUTATED
  DISTANT METASTASIS                                                                                                  9
  PRIMARY TUMOR                                                                                                       0
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                            6
  REGIONAL LYMPH NODE                                                                                                38
                                                                                          clus
vv                                                                                         DEL PEAK 27(19P13.3) WILD-TYPE
  DISTANT METASTASIS                                                                                                   16
  PRIMARY TUMOR                                                                                                         1
  REGIONAL CUTANEOUS OR SUBCUTANEOUS TISSUE (INCLUDES SATELLITE AND IN-TRANSIT METASTASIS)                             29
  REGIONAL LYMPH NODE                                                                                                  74
D51V4, binary
[1] "tbl2"
                                cls
clus                             [,1] [,2]
  DEL PEAK 27(19P13.3) MUTATED     24   29
  DEL PEAK 27(19P13.3) WILD-TYPE   43   77
        clus
vv       DEL PEAK 27(19P13.3) MUTATED DEL PEAK 27(19P13.3) WILD-TYPE
  FEMALE                           24                             43
  MALE                             29                             77
                                vv
clus                              M0  M1 M1A M1B M1C
  DEL PEAK 27(19P13.3) MUTATED    44   0   1   1   2
  DEL PEAK 27(19P13.3) WILD-TYPE 106   2   1   1   0
D51V5, multiclass
                                vv
clus                             N0 N1 N1A N1B N2 N2A N2B N2C N3 NX
  DEL PEAK 27(19P13.3) MUTATED   25  0   2   7  0   2   3   2  6  1
  DEL PEAK 27(19P13.3) WILD-TYPE 70  2   5   9  1   2   8   3 10  1
D51V6, multiclass
D51V7, continuous
                                vv
clus                             I OR II NOS STAGE I STAGE IA STAGE IB STAGE II
  DEL PEAK 27(19P13.3) MUTATED             2       3        4        6        2
  DEL PEAK 27(19P13.3) WILD-TYPE           2      14        6        8       17
                                vv
clus                             STAGE IIA STAGE IIB STAGE IIC STAGE III
  DEL PEAK 27(19P13.3) MUTATED           2         2         2         2
  DEL PEAK 27(19P13.3) WILD-TYPE         6         8         6         7
                                vv
clus                             STAGE IIIA STAGE IIIB STAGE IIIC STAGE IV
  DEL PEAK 27(19P13.3) MUTATED            2          8          8        2
  DEL PEAK 27(19P13.3) WILD-TYPE          4         10         15        4
D51V8, multiclass
                     V1.D                        V2                        V3 
          "Time to Death"                     "AGE" "PRIMARY.SITE.OF.DISEASE" 
                       V4                        V5                        V6 
                 "GENDER"      "DISTANT.METASTASIS"   "LYMPH.NODE.METASTASIS" 
                       V7                        V8 
        "TUMOR.STAGECODE"   "NEOPLASM.DISEASESTAGE" 
> q(save="no")
