
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_mutation_onlysig.3.4048/Clusters2ClinicalAnalysis_nozzle_onlysig.R")
> result <- main("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/Correlate_Cluster_mutation_onlysig.3.4048/", "-nF=/xchip/tcga/Tools/Nozzle/v1.current", "-iD=/xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/399306/SKCM-NF1_Any_Mutants.mutsig.cluster.txt", "-iC=/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergedClusteringPipeline/SKCM-NF1_Any_Mutants/3157448/1.GDAC_mergedClustering.Finished/SKCM-NF1_Any_Mutants.transferedmergedcluster.txt", "-fF=ALL", "-fC=3", "-fH=5", "-fW=9", "-fP=OUT", "-cP=0.05", "-cQ=0.25", "-MF=ONLYSIG", "-oT=SKCM-NF1_Any_Mutants", "-nV=Nozzle.R1", "-OP=MUTSIG", "-iT=", "-iX=")
[1] "nver"          "-nV=Nozzle.R1"
[1] "nfn"                                 "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
[1] "successfully load Nozzle.R1"
[1] "ofn"                      "-oT=SKCM-NF1_Any_Mutants"
[1] "opt"        "-OP=MUTSIG"
[1] "tl"   "-iT="
[1] "dx"   "-iX="
[1] "opt"    "MUTSIG"
[1] "dx" ""  

nPatients in clinical file=31, in cluster file=31, common to both=31
[1] "Reduce the number of clustering variables from 76 to 75."
[1] 75 31
[1] "NRAS MUTATION ANALYSIS"
[1] 3
  NRAS MUTATED NRAS WILD-TYPE 
             9             22 
  NRAS MUTATED NRAS WILD-TYPE 
             9             22 
[1] "TPTE MUTATION ANALYSIS"
[1] 3
  TPTE MUTATED TPTE WILD-TYPE 
            15             16 
  TPTE MUTATED TPTE WILD-TYPE 
            15             16 
[1] "TP53 MUTATION ANALYSIS"
[1] 3
  TP53 MUTATED TP53 WILD-TYPE 
            10             21 
  TP53 MUTATED TP53 WILD-TYPE 
            10             21 
[1] "GRXCR1 MUTATION ANALYSIS"
[1] 3
  GRXCR1 MUTATED GRXCR1 WILD-TYPE 
              10               21 
  GRXCR1 MUTATED GRXCR1 WILD-TYPE 
              10               21 
[1] "BRAF MUTATION ANALYSIS"
[1] 3
  BRAF MUTATED BRAF WILD-TYPE 
             9             22 
  BRAF MUTATED BRAF WILD-TYPE 
             9             22 
[1] "TRAT1 MUTATION ANALYSIS"
[1] 3
  TRAT1 MUTATED TRAT1 WILD-TYPE 
              7              24 
  TRAT1 MUTATED TRAT1 WILD-TYPE 
              7              24 
[1] "ZNF585B MUTATION ANALYSIS"
[1] 3
  ZNF585B MUTATED ZNF585B WILD-TYPE 
                9                22 
  ZNF585B MUTATED ZNF585B WILD-TYPE 
                9                22 
[1] "TPTE2 MUTATION ANALYSIS"
[1] 3
  TPTE2 MUTATED TPTE2 WILD-TYPE 
             12              19 
  TPTE2 MUTATED TPTE2 WILD-TYPE 
             12              19 
[1] "OR51S1 MUTATION ANALYSIS"
[1] 3
  OR51S1 MUTATED OR51S1 WILD-TYPE 
              11               20 
  OR51S1 MUTATED OR51S1 WILD-TYPE 
              11               20 
[1] "RAC1 MUTATION ANALYSIS"
[1] 3
  RAC1 MUTATED RAC1 WILD-TYPE 
             5             26 
  RAC1 MUTATED RAC1 WILD-TYPE 
             5             26 
[1] "CDKN2A MUTATION ANALYSIS"
[1] 3
  CDKN2A MUTATED CDKN2A WILD-TYPE 
               6               25 
  CDKN2A MUTATED CDKN2A WILD-TYPE 
               6               25 
[1] "C7 MUTATION ANALYSIS"
[1] 3
  C7 MUTATED C7 WILD-TYPE 
          14           17 
  C7 MUTATED C7 WILD-TYPE 
          14           17 
[1] "C15ORF23 MUTATION ANALYSIS"
[1] 3
  C15ORF23 MUTATED C15ORF23 WILD-TYPE 
                 6                 25 
  C15ORF23 MUTATED C15ORF23 WILD-TYPE 
                 6                 25 
[1] "GLRB MUTATION ANALYSIS"
[1] 3
  GLRB MUTATED GLRB WILD-TYPE 
             9             22 
  GLRB MUTATED GLRB WILD-TYPE 
             9             22 
[1] "FAM58A MUTATION ANALYSIS"
[1] 3
  FAM58A MUTATED FAM58A WILD-TYPE 
               5               26 
  FAM58A MUTATED FAM58A WILD-TYPE 
               5               26 
[1] "EPHA6 MUTATION ANALYSIS"
[1] 3
  EPHA6 MUTATED EPHA6 WILD-TYPE 
             15              16 
  EPHA6 MUTATED EPHA6 WILD-TYPE 
             15              16 
[1] "NAP1L2 MUTATION ANALYSIS"
[1] 3
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               9               22 
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               9               22 
[1] "OR4K5 MUTATION ANALYSIS"
[1] 3
  OR4K5 MUTATED OR4K5 WILD-TYPE 
             10              21 
  OR4K5 MUTATED OR4K5 WILD-TYPE 
             10              21 
[1] "SLC9A11 MUTATION ANALYSIS"
[1] 3
  SLC9A11 MUTATED SLC9A11 WILD-TYPE 
               13                18 
  SLC9A11 MUTATED SLC9A11 WILD-TYPE 
               13                18 
[1] "ADAMTS20 MUTATION ANALYSIS"
[1] 3
  ADAMTS20 MUTATED ADAMTS20 WILD-TYPE 
                18                 13 
  ADAMTS20 MUTATED ADAMTS20 WILD-TYPE 
                18                 13 
[1] "SLC38A4 MUTATION ANALYSIS"
[1] 3
  SLC38A4 MUTATED SLC38A4 WILD-TYPE 
               13                18 
  SLC38A4 MUTATED SLC38A4 WILD-TYPE 
               13                18 
[1] "OR2T2 MUTATION ANALYSIS"
[1] 3
  OR2T2 MUTATED OR2T2 WILD-TYPE 
              8              23 
  OR2T2 MUTATED OR2T2 WILD-TYPE 
              8              23 
[1] "PRB2 MUTATION ANALYSIS"
[1] 3
  PRB2 MUTATED PRB2 WILD-TYPE 
            11             20 
  PRB2 MUTATED PRB2 WILD-TYPE 
            11             20 
[1] "COL21A1 MUTATION ANALYSIS"
[1] 3
  COL21A1 MUTATED COL21A1 WILD-TYPE 
               12                19 
  COL21A1 MUTATED COL21A1 WILD-TYPE 
               12                19 
[1] "OR4N2 MUTATION ANALYSIS"
[1] 3
  OR4N2 MUTATED OR4N2 WILD-TYPE 
             10              21 
  OR4N2 MUTATED OR4N2 WILD-TYPE 
             10              21 
[1] "PROX1 MUTATION ANALYSIS"
[1] 3
  PROX1 MUTATED PROX1 WILD-TYPE 
              7              24 
  PROX1 MUTATED PROX1 WILD-TYPE 
              7              24 
[1] "ANGPT1 MUTATION ANALYSIS"
[1] 3
  ANGPT1 MUTATED ANGPT1 WILD-TYPE 
              10               21 
  ANGPT1 MUTATED ANGPT1 WILD-TYPE 
              10               21 
[1] "C8A MUTATION ANALYSIS"
[1] 3
  C8A MUTATED C8A WILD-TYPE 
           11            20 
  C8A MUTATED C8A WILD-TYPE 
           11            20 
[1] "SERPINB11 MUTATION ANALYSIS"
[1] 3
  SERPINB11 MUTATED SERPINB11 WILD-TYPE 
                  7                  24 
  SERPINB11 MUTATED SERPINB11 WILD-TYPE 
                  7                  24 
[1] "C18ORF34 MUTATION ANALYSIS"
[1] 3
  C18ORF34 MUTATED C18ORF34 WILD-TYPE 
                11                 20 
  C18ORF34 MUTATED C18ORF34 WILD-TYPE 
                11                 20 
[1] "FRG2B MUTATION ANALYSIS"
[1] 3
  FRG2B MUTATED FRG2B WILD-TYPE 
              7              24 
  FRG2B MUTATED FRG2B WILD-TYPE 
              7              24 
[1] "LPPR1 MUTATION ANALYSIS"
[1] 3
  LPPR1 MUTATED LPPR1 WILD-TYPE 
              5              26 
  LPPR1 MUTATED LPPR1 WILD-TYPE 
              5              26 
[1] "THEMIS MUTATION ANALYSIS"
[1] 3
  THEMIS MUTATED THEMIS WILD-TYPE 
              10               21 
  THEMIS MUTATED THEMIS WILD-TYPE 
              10               21 
[1] "SNAP91 MUTATION ANALYSIS"
[1] 3
  SNAP91 MUTATED SNAP91 WILD-TYPE 
              10               21 
  SNAP91 MUTATED SNAP91 WILD-TYPE 
              10               21 
[1] "SLC27A6 MUTATION ANALYSIS"
[1] 3
  SLC27A6 MUTATED SLC27A6 WILD-TYPE 
                8                23 
  SLC27A6 MUTATED SLC27A6 WILD-TYPE 
                8                23 
[1] "CXORF22 MUTATION ANALYSIS"
[1] 3
  CXORF22 MUTATED CXORF22 WILD-TYPE 
               11                20 
  CXORF22 MUTATED CXORF22 WILD-TYPE 
               11                20 
[1] "NOBOX MUTATION ANALYSIS"
[1] 3
  NOBOX MUTATED NOBOX WILD-TYPE 
              8              23 
  NOBOX MUTATED NOBOX WILD-TYPE 
              8              23 
[1] "MUC7 MUTATION ANALYSIS"
[1] 3
  MUC7 MUTATED MUC7 WILD-TYPE 
             8             23 
  MUC7 MUTATED MUC7 WILD-TYPE 
             8             23 
[1] "GIMAP7 MUTATION ANALYSIS"
[1] 3
  GIMAP7 MUTATED GIMAP7 WILD-TYPE 
               6               25 
  GIMAP7 MUTATED GIMAP7 WILD-TYPE 
               6               25 
[1] "SYT17 MUTATION ANALYSIS"
[1] 3
  SYT17 MUTATED SYT17 WILD-TYPE 
              6              25 
  SYT17 MUTATED SYT17 WILD-TYPE 
              6              25 
[1] "ASB15 MUTATION ANALYSIS"
[1] 3
  ASB15 MUTATED ASB15 WILD-TYPE 
              9              22 
  ASB15 MUTATED ASB15 WILD-TYPE 
              9              22 
[1] "OR4A15 MUTATION ANALYSIS"
[1] 3
  OR4A15 MUTATED OR4A15 WILD-TYPE 
               8               23 
  OR4A15 MUTATED OR4A15 WILD-TYPE 
               8               23 
[1] "PROL1 MUTATION ANALYSIS"
[1] 3
  PROL1 MUTATED PROL1 WILD-TYPE 
              9              22 
  PROL1 MUTATED PROL1 WILD-TYPE 
              9              22 
[1] "DSG3 MUTATION ANALYSIS"
[1] 3
  DSG3 MUTATED DSG3 WILD-TYPE 
            16             15 
  DSG3 MUTATED DSG3 WILD-TYPE 
            16             15 
[1] "OPRK1 MUTATION ANALYSIS"
[1] 3
  OPRK1 MUTATED OPRK1 WILD-TYPE 
              9              22 
  OPRK1 MUTATED OPRK1 WILD-TYPE 
              9              22 
[1] "PCSK5 MUTATION ANALYSIS"
[1] 3
  PCSK5 MUTATED PCSK5 WILD-TYPE 
             13              18 
  PCSK5 MUTATED PCSK5 WILD-TYPE 
             13              18 
[1] "OR52A1 MUTATION ANALYSIS"
[1] 3
  OR52A1 MUTATED OR52A1 WILD-TYPE 
               8               23 
  OR52A1 MUTATED OR52A1 WILD-TYPE 
               8               23 
[1] "ACSM2B MUTATION ANALYSIS"
[1] 3
  ACSM2B MUTATED ACSM2B WILD-TYPE 
              10               21 
  ACSM2B MUTATED ACSM2B WILD-TYPE 
              10               21 
[1] "NOL4 MUTATION ANALYSIS"
[1] 3
  NOL4 MUTATED NOL4 WILD-TYPE 
            11             20 
  NOL4 MUTATED NOL4 WILD-TYPE 
            11             20 
[1] "OXA1L MUTATION ANALYSIS"
[1] 3
  OXA1L MUTATED OXA1L WILD-TYPE 
              4              27 
  OXA1L MUTATED OXA1L WILD-TYPE 
              4              27 
[1] "PPFIA2 MUTATION ANALYSIS"
[1] 3
  PPFIA2 MUTATED PPFIA2 WILD-TYPE 
              12               19 
  PPFIA2 MUTATED PPFIA2 WILD-TYPE 
              12               19 
[1] "IL1F8 MUTATION ANALYSIS"
[1] 3
  IL1F8 MUTATED IL1F8 WILD-TYPE 
              6              25 
  IL1F8 MUTATED IL1F8 WILD-TYPE 
              6              25 
[1] "UGT2A1 MUTATION ANALYSIS"
[1] 3
  UGT2A1 MUTATED UGT2A1 WILD-TYPE 
               7               24 
  UGT2A1 MUTATED UGT2A1 WILD-TYPE 
               7               24 
[1] "SYT13 MUTATION ANALYSIS"
[1] 3
  SYT13 MUTATED SYT13 WILD-TYPE 
              4              27 
  SYT13 MUTATED SYT13 WILD-TYPE 
              4              27 
[1] "ASAH2 MUTATION ANALYSIS"
[1] 3
  ASAH2 MUTATED ASAH2 WILD-TYPE 
              6              25 
  ASAH2 MUTATED ASAH2 WILD-TYPE 
              6              25 
[1] "ZNF679 MUTATION ANALYSIS"
[1] 3
  ZNF679 MUTATED ZNF679 WILD-TYPE 
               7               24 
  ZNF679 MUTATED ZNF679 WILD-TYPE 
               7               24 
[1] "C10ORF54 MUTATION ANALYSIS"
[1] 3
  C10ORF54 MUTATED C10ORF54 WILD-TYPE 
                 6                 25 
  C10ORF54 MUTATED C10ORF54 WILD-TYPE 
                 6                 25 
[1] "C10ORF120 MUTATION ANALYSIS"
[1] 3
  C10ORF120 MUTATED C10ORF120 WILD-TYPE 
                  7                  24 
  C10ORF120 MUTATED C10ORF120 WILD-TYPE 
                  7                  24 
[1] "CHSY1 MUTATION ANALYSIS"
[1] 3
  CHSY1 MUTATED CHSY1 WILD-TYPE 
              5              26 
  CHSY1 MUTATED CHSY1 WILD-TYPE 
              5              26 
[1] "CSF2RA MUTATION ANALYSIS"
[1] 3
  CSF2RA MUTATED CSF2RA WILD-TYPE 
               6               25 
  CSF2RA MUTATED CSF2RA WILD-TYPE 
               6               25 
[1] "KCND2 MUTATION ANALYSIS"
[1] 3
  KCND2 MUTATED KCND2 WILD-TYPE 
             10              21 
  KCND2 MUTATED KCND2 WILD-TYPE 
             10              21 
[1] "SPEF2 MUTATION ANALYSIS"
[1] 3
  SPEF2 MUTATED SPEF2 WILD-TYPE 
             12              19 
  SPEF2 MUTATED SPEF2 WILD-TYPE 
             12              19 
[1] "RPGRIP1 MUTATION ANALYSIS"
[1] 3
  RPGRIP1 MUTATED RPGRIP1 WILD-TYPE 
                8                23 
  RPGRIP1 MUTATED RPGRIP1 WILD-TYPE 
                8                23 
[1] "OR2L3 MUTATION ANALYSIS"
[1] 3
  OR2L3 MUTATED OR2L3 WILD-TYPE 
              4              27 
  OR2L3 MUTATED OR2L3 WILD-TYPE 
              4              27 
[1] "CCDC54 MUTATION ANALYSIS"
[1] 3
  CCDC54 MUTATED CCDC54 WILD-TYPE 
               6               25 
  CCDC54 MUTATED CCDC54 WILD-TYPE 
               6               25 
[1] "KLHL14 MUTATION ANALYSIS"
[1] 3
  KLHL14 MUTATED KLHL14 WILD-TYPE 
               7               24 
  KLHL14 MUTATED KLHL14 WILD-TYPE 
               7               24 
[1] "ZFX MUTATION ANALYSIS"
[1] 3
  ZFX MUTATED ZFX WILD-TYPE 
            7            24 
  ZFX MUTATED ZFX WILD-TYPE 
            7            24 
[1] "KLHL13 MUTATION ANALYSIS"
[1] 3
  KLHL13 MUTATED KLHL13 WILD-TYPE 
              10               21 
  KLHL13 MUTATED KLHL13 WILD-TYPE 
              10               21 
[1] "NSUN7 MUTATION ANALYSIS"
[1] 3
  NSUN7 MUTATED NSUN7 WILD-TYPE 
              5              26 
  NSUN7 MUTATED NSUN7 WILD-TYPE 
              5              26 
[1] "VEGFC MUTATION ANALYSIS"
[1] 3
  VEGFC MUTATED VEGFC WILD-TYPE 
              6              25 
  VEGFC MUTATED VEGFC WILD-TYPE 
              6              25 
[1] "TMEM202 MUTATION ANALYSIS"
[1] 3
  TMEM202 MUTATED TMEM202 WILD-TYPE 
                5                26 
  TMEM202 MUTATED TMEM202 WILD-TYPE 
                5                26 
[1] "ERC2 MUTATION ANALYSIS"
[1] 3
  ERC2 MUTATED ERC2 WILD-TYPE 
            15             16 
  ERC2 MUTATED ERC2 WILD-TYPE 
            15             16 
[1] "GRM3 MUTATION ANALYSIS"
[1] 3
  GRM3 MUTATED GRM3 WILD-TYPE 
            12             19 
  GRM3 MUTATED GRM3 WILD-TYPE 
            12             19 
[1] "CDH12 MUTATION ANALYSIS"
[1] 3
  CDH12 MUTATED CDH12 WILD-TYPE 
              9              22 
  CDH12 MUTATED CDH12 WILD-TYPE 
              9              22 
[1] "SIRPB1 MUTATION ANALYSIS"
[1] 3
  SIRPB1 MUTATED SIRPB1 WILD-TYPE 
               7               24 
  SIRPB1 MUTATED SIRPB1 WILD-TYPE 
               7               24 
[1] "data2feature, selection=ALL"
[1] "CN_CNMF"               "METHLYATION_CNMF"      "RPPA_CNMF"            
[4] "RPPA_CHIERARCHICAL"    "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL"
[7] "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 

Input Data has 8 rows and 31 columns.

Variable 1:'CN_CNMF':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'RPPA_CNMF':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'RPPA_CHIERARCHICAL':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_CNMF':	nDistinctValues=2,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=6,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "rownames(nsurv.mat)"
[1] "CN_CNMF"               "METHLYATION_CNMF"      "RPPA_CNMF"            
[4] "RPPA_CHIERARCHICAL"    "MRNASEQ_CNMF"          "MRNASEQ_CHIERARCHICAL"
[7] "MIRSEQ_CNMF"           "MIRSEQ_CHIERARCHICAL" 
[1] "TUMOR.?STAGE"
[1] "TUMOR.?GRADE"
[1] "PATHOLOGY.T"
[1] "PATHOLOGY.N"
Output Data has 31 columns, 0 survival variables, and 8 non-survival variables.
CN_CNMF, nv=2, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=2, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=2, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=2, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=2, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=6, binary=FALSE, numeric=FALSE

Clustering(1) Variable = NRAS MUTATION ANALYSIS
D1V1, binary
                cls
clus              0  1
  NRAS MUTATED    4  5
  NRAS WILD-TYPE 12 10
[1] "tbl2"
                cls
clus             [,1] [,2]
  NRAS MUTATED      4    5
  NRAS WILD-TYPE   12   10
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            4             12
  CLUS_2            5             10
D1V2, binary
                cls
clus              0  1
  NRAS MUTATED    1  8
  NRAS WILD-TYPE 13  9
[1] "tbl2"
                cls
clus             [,1] [,2]
  NRAS MUTATED      1    8
  NRAS WILD-TYPE   13    9
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            1             13
  CLUS_2            8              9
D1V3, binary
                cls
clus              0  1
  NRAS MUTATED    3  6
  NRAS WILD-TYPE  4 10
[1] "tbl2"
                cls
clus             [,1] [,2]
  NRAS MUTATED      3    6
  NRAS WILD-TYPE    4   10
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            3              4
  CLUS_2            6             10
D1V4, binary
                cls
clus              0  1
  NRAS MUTATED    1  8
  NRAS WILD-TYPE  3 11
[1] "tbl2"
                cls
clus             [,1] [,2]
  NRAS MUTATED      1    8
  NRAS WILD-TYPE    3   11
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            1              3
  CLUS_2            8             11
D1V5, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            3              5
  CLUS_2            2              9
  CLUS_3            4              8
D1V6, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            1              5
  CLUS_2            2              6
  CLUS_3            2              5
  CLUS_4            4              6
D1V7, binary
                cls
clus              0  1
  NRAS MUTATED    4  5
  NRAS WILD-TYPE 12 10
[1] "tbl2"
                cls
clus             [,1] [,2]
  NRAS MUTATED      4    5
  NRAS WILD-TYPE   12   10
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            4             12
  CLUS_2            5             10
D1V8, multiclass

Clustering(2) Variable = TPTE MUTATION ANALYSIS
D2V1, binary
                cls
clus              0  1
  TPTE MUTATED    6  9
  TPTE WILD-TYPE 10  6
[1] "tbl2"
                cls
clus             [,1] [,2]
  TPTE MUTATED      6    9
  TPTE WILD-TYPE   10    6
        clus
vv       TPTE MUTATED TPTE WILD-TYPE
  CLUS_1            6             10
  CLUS_2            9              6
D2V2, binary
                cls
clus             0 1
  TPTE MUTATED   6 9
  TPTE WILD-TYPE 8 8
[1] "tbl2"
                cls
clus             [,1] [,2]
  TPTE MUTATED      6    9
  TPTE WILD-TYPE    8    8
        clus
vv       TPTE MUTATED TPTE WILD-TYPE
  CLUS_1            6              8
  CLUS_2            9              8
D2V3, binary
                cls
clus             0 1
  TPTE MUTATED   4 9
  TPTE WILD-TYPE 3 7
[1] "tbl2"
                cls
clus             [,1] [,2]
  TPTE MUTATED      4    9
  TPTE WILD-TYPE    3    7
        clus
vv       TPTE MUTATED TPTE WILD-TYPE
  CLUS_1            4              3
  CLUS_2            9              7
D2V4, binary
                cls
clus              0  1
  TPTE MUTATED    1 12
  TPTE WILD-TYPE  3  7
[1] "tbl2"
                cls
clus             [,1] [,2]
  TPTE MUTATED      1   12
  TPTE WILD-TYPE    3    7
        clus
vv       TPTE MUTATED TPTE WILD-TYPE
  CLUS_1            1              3
  CLUS_2           12              7
D2V5, multiclass
        clus
vv       TPTE MUTATED TPTE WILD-TYPE
  CLUS_1            4              4
  CLUS_2            6              5
  CLUS_3            5              7
D2V6, multiclass
        clus
vv       TPTE MUTATED TPTE WILD-TYPE
  CLUS_1            2              4
  CLUS_2            5              3
  CLUS_3            1              6
  CLUS_4            7              3
D2V7, binary
                cls
clus              0  1
  TPTE MUTATED    6  9
  TPTE WILD-TYPE 10  6
[1] "tbl2"
                cls
clus             [,1] [,2]
  TPTE MUTATED      6    9
  TPTE WILD-TYPE   10    6
        clus
vv       TPTE MUTATED TPTE WILD-TYPE
  CLUS_1            6             10
  CLUS_2            9              6
D2V8, multiclass

Clustering(3) Variable = TP53 MUTATION ANALYSIS
D3V1, binary
                cls
clus              0  1
  TP53 MUTATED    8  2
  TP53 WILD-TYPE  8 13
[1] "tbl2"
                cls
clus             [,1] [,2]
  TP53 MUTATED      8    2
  TP53 WILD-TYPE    8   13
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1            8              8
  CLUS_2            2             13
D3V2, binary
                cls
clus              0  1
  TP53 MUTATED    6  4
  TP53 WILD-TYPE  8 13
[1] "tbl2"
                cls
clus             [,1] [,2]
  TP53 MUTATED      6    4
  TP53 WILD-TYPE    8   13
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1            6              8
  CLUS_2            4             13
D3V3, binary
                cls
clus              0  1
  TP53 MUTATED    1  6
  TP53 WILD-TYPE  6 10
[1] "tbl2"
                cls
clus             [,1] [,2]
  TP53 MUTATED      1    6
  TP53 WILD-TYPE    6   10
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1            1              6
  CLUS_2            6             10
D3V4, binary
                cls
clus              0  1
  TP53 MUTATED    1  6
  TP53 WILD-TYPE  3 13
[1] "tbl2"
                cls
clus             [,1] [,2]
  TP53 MUTATED      1    6
  TP53 WILD-TYPE    3   13
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1            1              3
  CLUS_2            6             13
D3V5, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1            1              7
  CLUS_2            7              4
  CLUS_3            2             10
D3V6, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1            3              3
  CLUS_2            5              3
  CLUS_3            1              6
  CLUS_4            1              9
D3V7, binary
                cls
clus              0  1
  TP53 MUTATED    5  5
  TP53 WILD-TYPE 11 10
[1] "tbl2"
                cls
clus             [,1] [,2]
  TP53 MUTATED      5    5
  TP53 WILD-TYPE   11   10
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1            5             11
  CLUS_2            5             10
D3V8, multiclass

Clustering(4) Variable = GRXCR1 MUTATION ANALYSIS
D4V1, binary
                  cls
clus                0  1
  GRXCR1 MUTATED    6  4
  GRXCR1 WILD-TYPE 10 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  GRXCR1 MUTATED      6    4
  GRXCR1 WILD-TYPE   10   11
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              6               10
  CLUS_2              4               11
D4V2, binary
                  cls
clus                0  1
  GRXCR1 MUTATED    5  5
  GRXCR1 WILD-TYPE  9 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  GRXCR1 MUTATED      5    5
  GRXCR1 WILD-TYPE    9   12
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              5                9
  CLUS_2              5               12
D4V3, binary
                  cls
clus                0  1
  GRXCR1 MUTATED    1  5
  GRXCR1 WILD-TYPE  6 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  GRXCR1 MUTATED      1    5
  GRXCR1 WILD-TYPE    6   11
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              1                6
  CLUS_2              5               11
D4V4, binary
                  cls
clus                0  1
  GRXCR1 MUTATED    0  6
  GRXCR1 WILD-TYPE  4 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  GRXCR1 MUTATED      0    6
  GRXCR1 WILD-TYPE    4   13
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              0                4
  CLUS_2              6               13
D4V5, multiclass
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              3                5
  CLUS_2              5                6
  CLUS_3              2               10
D4V6, multiclass
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              2                4
  CLUS_2              4                4
  CLUS_3              0                7
  CLUS_4              4                6
D4V7, binary
                  cls
clus                0  1
  GRXCR1 MUTATED    4  6
  GRXCR1 WILD-TYPE 12  9
[1] "tbl2"
                  cls
clus               [,1] [,2]
  GRXCR1 MUTATED      4    6
  GRXCR1 WILD-TYPE   12    9
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              4               12
  CLUS_2              6                9
D4V8, multiclass

Clustering(5) Variable = BRAF MUTATION ANALYSIS
D5V1, binary
                cls
clus              0  1
  BRAF MUTATED    6  3
  BRAF WILD-TYPE 10 12
[1] "tbl2"
                cls
clus             [,1] [,2]
  BRAF MUTATED      6    3
  BRAF WILD-TYPE   10   12
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            6             10
  CLUS_2            3             12
D5V2, binary
                cls
clus              0  1
  BRAF MUTATED    5  4
  BRAF WILD-TYPE  9 13
[1] "tbl2"
                cls
clus             [,1] [,2]
  BRAF MUTATED      5    4
  BRAF WILD-TYPE    9   13
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            5              9
  CLUS_2            4             13
D5V3, binary
                cls
clus              0  1
  BRAF MUTATED    2  3
  BRAF WILD-TYPE  5 13
[1] "tbl2"
                cls
clus             [,1] [,2]
  BRAF MUTATED      2    3
  BRAF WILD-TYPE    5   13
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            2              5
  CLUS_2            3             13
D5V4, binary
                cls
clus              0  1
  BRAF MUTATED    0  5
  BRAF WILD-TYPE  4 14
[1] "tbl2"
                cls
clus             [,1] [,2]
  BRAF MUTATED      0    5
  BRAF WILD-TYPE    4   14
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            0              4
  CLUS_2            5             14
D5V5, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            2              6
  CLUS_2            4              7
  CLUS_3            3              9
D5V6, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            2              4
  CLUS_2            3              5
  CLUS_3            1              6
  CLUS_4            3              7
D5V7, binary
                cls
clus              0  1
  BRAF MUTATED    5  4
  BRAF WILD-TYPE 11 11
[1] "tbl2"
                cls
clus             [,1] [,2]
  BRAF MUTATED      5    4
  BRAF WILD-TYPE   11   11
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            5             11
  CLUS_2            4             11
D5V8, multiclass

Clustering(6) Variable = TRAT1 MUTATION ANALYSIS
D6V1, binary
                 cls
clus               0  1
  TRAT1 MUTATED    3  4
  TRAT1 WILD-TYPE 13 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TRAT1 MUTATED      3    4
  TRAT1 WILD-TYPE   13   11
        clus
vv       TRAT1 MUTATED TRAT1 WILD-TYPE
  CLUS_1             3              13
  CLUS_2             4              11
D6V2, binary
                 cls
clus               0  1
  TRAT1 MUTATED    3  4
  TRAT1 WILD-TYPE 11 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TRAT1 MUTATED      3    4
  TRAT1 WILD-TYPE   11   13
        clus
vv       TRAT1 MUTATED TRAT1 WILD-TYPE
  CLUS_1             3              11
  CLUS_2             4              13
D6V3, binary
                 cls
clus               0  1
  TRAT1 MUTATED    2  5
  TRAT1 WILD-TYPE  5 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TRAT1 MUTATED      2    5
  TRAT1 WILD-TYPE    5   11
        clus
vv       TRAT1 MUTATED TRAT1 WILD-TYPE
  CLUS_1             2               5
  CLUS_2             5              11
D6V4, binary
                 cls
clus               0  1
  TRAT1 MUTATED    1  6
  TRAT1 WILD-TYPE  3 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TRAT1 MUTATED      1    6
  TRAT1 WILD-TYPE    3   13
        clus
vv       TRAT1 MUTATED TRAT1 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             6              13
D6V5, multiclass
        clus
vv       TRAT1 MUTATED TRAT1 WILD-TYPE
  CLUS_1             0               8
  CLUS_2             3               8
  CLUS_3             4               8
D6V6, multiclass
        clus
vv       TRAT1 MUTATED TRAT1 WILD-TYPE
  CLUS_1             1               5
  CLUS_2             2               6
  CLUS_3             1               6
  CLUS_4             3               7
D6V7, binary
                 cls
clus               0  1
  TRAT1 MUTATED    1  6
  TRAT1 WILD-TYPE 15  9
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TRAT1 MUTATED      1    6
  TRAT1 WILD-TYPE   15    9
        clus
vv       TRAT1 MUTATED TRAT1 WILD-TYPE
  CLUS_1             1              15
  CLUS_2             6               9
D6V8, multiclass

Clustering(7) Variable = ZNF585B MUTATION ANALYSIS
D7V1, binary
                   cls
clus                 0  1
  ZNF585B MUTATED    5  4
  ZNF585B WILD-TYPE 11 11
[1] "tbl2"
                   cls
clus                [,1] [,2]
  ZNF585B MUTATED      5    4
  ZNF585B WILD-TYPE   11   11
        clus
vv       ZNF585B MUTATED ZNF585B WILD-TYPE
  CLUS_1               5                11
  CLUS_2               4                11
D7V2, binary
                   cls
clus                 0  1
  ZNF585B MUTATED    5  4
  ZNF585B WILD-TYPE  9 13
[1] "tbl2"
                   cls
clus                [,1] [,2]
  ZNF585B MUTATED      5    4
  ZNF585B WILD-TYPE    9   13
        clus
vv       ZNF585B MUTATED ZNF585B WILD-TYPE
  CLUS_1               5                 9
  CLUS_2               4                13
D7V3, binary
                   cls
clus                0 1
  ZNF585B MUTATED   0 8
  ZNF585B WILD-TYPE 7 8
[1] "tbl2"
                   cls
clus                [,1] [,2]
  ZNF585B MUTATED      0    8
  ZNF585B WILD-TYPE    7    8
        clus
vv       ZNF585B MUTATED ZNF585B WILD-TYPE
  CLUS_1               0                 7
  CLUS_2               8                 8
D7V4, binary
                   cls
clus                 0  1
  ZNF585B MUTATED    0  8
  ZNF585B WILD-TYPE  4 11
[1] "tbl2"
                   cls
clus                [,1] [,2]
  ZNF585B MUTATED      0    8
  ZNF585B WILD-TYPE    4   11
        clus
vv       ZNF585B MUTATED ZNF585B WILD-TYPE
  CLUS_1               0                 4
  CLUS_2               8                11
D7V5, multiclass
        clus
vv       ZNF585B MUTATED ZNF585B WILD-TYPE
  CLUS_1               2                 6
  CLUS_2               5                 6
  CLUS_3               2                10
D7V6, multiclass
        clus
vv       ZNF585B MUTATED ZNF585B WILD-TYPE
  CLUS_1               1                 5
  CLUS_2               5                 3
  CLUS_3               0                 7
  CLUS_4               3                 7
D7V7, binary
                   cls
clus                 0  1
  ZNF585B MUTATED    2  7
  ZNF585B WILD-TYPE 14  8
[1] "tbl2"
                   cls
clus                [,1] [,2]
  ZNF585B MUTATED      2    7
  ZNF585B WILD-TYPE   14    8
        clus
vv       ZNF585B MUTATED ZNF585B WILD-TYPE
  CLUS_1               2                14
  CLUS_2               7                 8
D7V8, multiclass

Clustering(8) Variable = TPTE2 MUTATION ANALYSIS
D8V1, binary
                 cls
clus               0  1
  TPTE2 MUTATED    4  8
  TPTE2 WILD-TYPE 12  7
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TPTE2 MUTATED      4    8
  TPTE2 WILD-TYPE   12    7
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             4              12
  CLUS_2             8               7
D8V2, binary
                 cls
clus               0  1
  TPTE2 MUTATED    5  7
  TPTE2 WILD-TYPE  9 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TPTE2 MUTATED      5    7
  TPTE2 WILD-TYPE    9   10
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             5               9
  CLUS_2             7              10
D8V3, binary
                 cls
clus              0 1
  TPTE2 MUTATED   2 8
  TPTE2 WILD-TYPE 5 8
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TPTE2 MUTATED      2    8
  TPTE2 WILD-TYPE    5    8
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             2               5
  CLUS_2             8               8
D8V4, binary
                 cls
clus               0  1
  TPTE2 MUTATED    1  9
  TPTE2 WILD-TYPE  3 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TPTE2 MUTATED      1    9
  TPTE2 WILD-TYPE    3   10
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             9              10
D8V5, multiclass
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             4               4
  CLUS_2             2               9
  CLUS_3             6               6
D8V6, multiclass
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             1               5
  CLUS_2             1               7
  CLUS_3             2               5
  CLUS_4             8               2
D8V7, binary
                 cls
clus               0  1
  TPTE2 MUTATED    5  7
  TPTE2 WILD-TYPE 11  8
[1] "tbl2"
                 cls
clus              [,1] [,2]
  TPTE2 MUTATED      5    7
  TPTE2 WILD-TYPE   11    8
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             5              11
  CLUS_2             7               8
D8V8, multiclass

Clustering(9) Variable = OR51S1 MUTATION ANALYSIS
D9V1, binary
                  cls
clus                0  1
  OR51S1 MUTATED    7  4
  OR51S1 WILD-TYPE  9 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR51S1 MUTATED      7    4
  OR51S1 WILD-TYPE    9   11
        clus
vv       OR51S1 MUTATED OR51S1 WILD-TYPE
  CLUS_1              7                9
  CLUS_2              4               11
D9V2, binary
                  cls
clus                0  1
  OR51S1 MUTATED    7  4
  OR51S1 WILD-TYPE  7 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR51S1 MUTATED      7    4
  OR51S1 WILD-TYPE    7   13
        clus
vv       OR51S1 MUTATED OR51S1 WILD-TYPE
  CLUS_1              7                7
  CLUS_2              4               13
D9V3, binary
                  cls
clus               0 1
  OR51S1 MUTATED   1 7
  OR51S1 WILD-TYPE 6 9
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR51S1 MUTATED      1    7
  OR51S1 WILD-TYPE    6    9
        clus
vv       OR51S1 MUTATED OR51S1 WILD-TYPE
  CLUS_1              1                6
  CLUS_2              7                9
D9V4, binary
                  cls
clus                0  1
  OR51S1 MUTATED    0  8
  OR51S1 WILD-TYPE  4 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR51S1 MUTATED      0    8
  OR51S1 WILD-TYPE    4   11
        clus
vv       OR51S1 MUTATED OR51S1 WILD-TYPE
  CLUS_1              0                4
  CLUS_2              8               11
D9V5, multiclass
        clus
vv       OR51S1 MUTATED OR51S1 WILD-TYPE
  CLUS_1              4                4
  CLUS_2              6                5
  CLUS_3              1               11
D9V6, multiclass
        clus
vv       OR51S1 MUTATED OR51S1 WILD-TYPE
  CLUS_1              2                4
  CLUS_2              4                4
  CLUS_3              0                7
  CLUS_4              5                5
D9V7, binary
                  cls
clus                0  1
  OR51S1 MUTATED    6  5
  OR51S1 WILD-TYPE 10 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR51S1 MUTATED      6    5
  OR51S1 WILD-TYPE   10   10
        clus
vv       OR51S1 MUTATED OR51S1 WILD-TYPE
  CLUS_1              6               10
  CLUS_2              5               10
D9V8, multiclass

Clustering(10) Variable = RAC1 MUTATION ANALYSIS
D10V1, binary
                cls
clus              0  1
  RAC1 MUTATED    4  1
  RAC1 WILD-TYPE 12 14
[1] "tbl2"
                cls
clus             [,1] [,2]
  RAC1 MUTATED      4    1
  RAC1 WILD-TYPE   12   14
        clus
vv       RAC1 MUTATED RAC1 WILD-TYPE
  CLUS_1            4             12
  CLUS_2            1             14
D10V2, binary
                cls
clus              0  1
  RAC1 MUTATED    3  2
  RAC1 WILD-TYPE 11 15
[1] "tbl2"
                cls
clus             [,1] [,2]
  RAC1 MUTATED      3    2
  RAC1 WILD-TYPE   11   15
        clus
vv       RAC1 MUTATED RAC1 WILD-TYPE
  CLUS_1            3             11
  CLUS_2            2             15
D10V3, binary
                cls
clus              0  1
  RAC1 MUTATED    1  3
  RAC1 WILD-TYPE  6 13
[1] "tbl2"
                cls
clus             [,1] [,2]
  RAC1 MUTATED      1    3
  RAC1 WILD-TYPE    6   13
        clus
vv       RAC1 MUTATED RAC1 WILD-TYPE
  CLUS_1            1              6
  CLUS_2            3             13
D10V4, binary
                cls
clus              0  1
  RAC1 MUTATED    0  4
  RAC1 WILD-TYPE  4 15
[1] "tbl2"
                cls
clus             [,1] [,2]
  RAC1 MUTATED      0    4
  RAC1 WILD-TYPE    4   15
        clus
vv       RAC1 MUTATED RAC1 WILD-TYPE
  CLUS_1            0              4
  CLUS_2            4             15
D10V5, multiclass
        clus
vv       RAC1 MUTATED RAC1 WILD-TYPE
  CLUS_1            1              7
  CLUS_2            4              7
  CLUS_3            0             12
D10V6, multiclass
        clus
vv       RAC1 MUTATED RAC1 WILD-TYPE
  CLUS_1            3              3
  CLUS_2            2              6
  CLUS_3            0              7
  CLUS_4            0             10
D10V7, binary
                cls
clus              0  1
  RAC1 MUTATED    3  2
  RAC1 WILD-TYPE 13 13
[1] "tbl2"
                cls
clus             [,1] [,2]
  RAC1 MUTATED      3    2
  RAC1 WILD-TYPE   13   13
        clus
vv       RAC1 MUTATED RAC1 WILD-TYPE
  CLUS_1            3             13
  CLUS_2            2             13
D10V8, multiclass

Clustering(11) Variable = CDKN2A MUTATION ANALYSIS
D11V1, binary
                  cls
clus                0  1
  CDKN2A MUTATED    5  1
  CDKN2A WILD-TYPE 11 14
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CDKN2A MUTATED      5    1
  CDKN2A WILD-TYPE   11   14
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              5               11
  CLUS_2              1               14
D11V2, binary
                  cls
clus                0  1
  CDKN2A MUTATED    4  2
  CDKN2A WILD-TYPE 10 15
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CDKN2A MUTATED      4    2
  CDKN2A WILD-TYPE   10   15
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              4               10
  CLUS_2              2               15
D11V3, binary
                  cls
clus                0  1
  CDKN2A MUTATED    1  3
  CDKN2A WILD-TYPE  6 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CDKN2A MUTATED      1    3
  CDKN2A WILD-TYPE    6   13
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              1                6
  CLUS_2              3               13
D11V4, binary
                  cls
clus                0  1
  CDKN2A MUTATED    1  3
  CDKN2A WILD-TYPE  3 16
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CDKN2A MUTATED      1    3
  CDKN2A WILD-TYPE    3   16
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              1                3
  CLUS_2              3               16
D11V5, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              0                8
  CLUS_2              5                6
  CLUS_3              1               11
D11V6, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              2                4
  CLUS_2              3                5
  CLUS_3              1                6
  CLUS_4              0               10
D11V7, binary
                  cls
clus                0  1
  CDKN2A MUTATED    3  3
  CDKN2A WILD-TYPE 13 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CDKN2A MUTATED      3    3
  CDKN2A WILD-TYPE   13   12
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              3               13
  CLUS_2              3               12
D11V8, multiclass

Clustering(12) Variable = C7 MUTATION ANALYSIS
D12V1, binary
              cls
clus            0  1
  C7 MUTATED    6  8
  C7 WILD-TYPE 10  7
[1] "tbl2"
              cls
clus           [,1] [,2]
  C7 MUTATED      6    8
  C7 WILD-TYPE   10    7
        clus
vv       C7 MUTATED C7 WILD-TYPE
  CLUS_1          6           10
  CLUS_2          8            7
D12V2, binary
              cls
clus            0  1
  C7 MUTATED    4 10
  C7 WILD-TYPE 10  7
[1] "tbl2"
              cls
clus           [,1] [,2]
  C7 MUTATED      4   10
  C7 WILD-TYPE   10    7
        clus
vv       C7 MUTATED C7 WILD-TYPE
  CLUS_1          4           10
  CLUS_2         10            7
D12V3, binary
              cls
clus           0 1
  C7 MUTATED   2 9
  C7 WILD-TYPE 5 7
[1] "tbl2"
              cls
clus           [,1] [,2]
  C7 MUTATED      2    9
  C7 WILD-TYPE    5    7
        clus
vv       C7 MUTATED C7 WILD-TYPE
  CLUS_1          2            5
  CLUS_2          9            7
D12V4, binary
              cls
clus            0  1
  C7 MUTATED    1 10
  C7 WILD-TYPE  3  9
[1] "tbl2"
              cls
clus           [,1] [,2]
  C7 MUTATED      1   10
  C7 WILD-TYPE    3    9
        clus
vv       C7 MUTATED C7 WILD-TYPE
  CLUS_1          1            3
  CLUS_2         10            9
D12V5, multiclass
        clus
vv       C7 MUTATED C7 WILD-TYPE
  CLUS_1          5            3
  CLUS_2          5            6
  CLUS_3          4            8
D12V6, multiclass
        clus
vv       C7 MUTATED C7 WILD-TYPE
  CLUS_1          3            3
  CLUS_2          3            5
  CLUS_3          1            6
  CLUS_4          7            3
D12V7, binary
              cls
clus            0  1
  C7 MUTATED    6  8
  C7 WILD-TYPE 10  7
[1] "tbl2"
              cls
clus           [,1] [,2]
  C7 MUTATED      6    8
  C7 WILD-TYPE   10    7
        clus
vv       C7 MUTATED C7 WILD-TYPE
  CLUS_1          6           10
  CLUS_2          8            7
D12V8, multiclass

Clustering(13) Variable = C15ORF23 MUTATION ANALYSIS
D13V1, binary
                    cls
clus                  0  1
  C15ORF23 MUTATED    5  1
  C15ORF23 WILD-TYPE 11 14
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C15ORF23 MUTATED      5    1
  C15ORF23 WILD-TYPE   11   14
        clus
vv       C15ORF23 MUTATED C15ORF23 WILD-TYPE
  CLUS_1                5                 11
  CLUS_2                1                 14
D13V2, binary
                    cls
clus                  0  1
  C15ORF23 MUTATED    3  3
  C15ORF23 WILD-TYPE 11 14
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C15ORF23 MUTATED      3    3
  C15ORF23 WILD-TYPE   11   14
        clus
vv       C15ORF23 MUTATED C15ORF23 WILD-TYPE
  CLUS_1                3                 11
  CLUS_2                3                 14
D13V3, binary
                    cls
clus                  0  1
  C15ORF23 MUTATED    1  4
  C15ORF23 WILD-TYPE  6 12
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C15ORF23 MUTATED      1    4
  C15ORF23 WILD-TYPE    6   12
        clus
vv       C15ORF23 MUTATED C15ORF23 WILD-TYPE
  CLUS_1                1                  6
  CLUS_2                4                 12
D13V4, binary
                    cls
clus                  0  1
  C15ORF23 MUTATED    1  4
  C15ORF23 WILD-TYPE  3 15
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C15ORF23 MUTATED      1    4
  C15ORF23 WILD-TYPE    3   15
        clus
vv       C15ORF23 MUTATED C15ORF23 WILD-TYPE
  CLUS_1                1                  3
  CLUS_2                4                 15
D13V5, multiclass
        clus
vv       C15ORF23 MUTATED C15ORF23 WILD-TYPE
  CLUS_1                0                  8
  CLUS_2                5                  6
  CLUS_3                1                 11
D13V6, multiclass
        clus
vv       C15ORF23 MUTATED C15ORF23 WILD-TYPE
  CLUS_1                1                  5
  CLUS_2                4                  4
  CLUS_3                1                  6
  CLUS_4                0                 10
D13V7, binary
                    cls
clus                  0  1
  C15ORF23 MUTATED    2  4
  C15ORF23 WILD-TYPE 14 11
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C15ORF23 MUTATED      2    4
  C15ORF23 WILD-TYPE   14   11
        clus
vv       C15ORF23 MUTATED C15ORF23 WILD-TYPE
  CLUS_1                2                 14
  CLUS_2                4                 11
D13V8, multiclass

Clustering(14) Variable = GLRB MUTATION ANALYSIS
D14V1, binary
                cls
clus              0  1
  GLRB MUTATED    5  4
  GLRB WILD-TYPE 11 11
[1] "tbl2"
                cls
clus             [,1] [,2]
  GLRB MUTATED      5    4
  GLRB WILD-TYPE   11   11
        clus
vv       GLRB MUTATED GLRB WILD-TYPE
  CLUS_1            5             11
  CLUS_2            4             11
D14V2, binary
                cls
clus              0  1
  GLRB MUTATED    5  4
  GLRB WILD-TYPE  9 13
[1] "tbl2"
                cls
clus             [,1] [,2]
  GLRB MUTATED      5    4
  GLRB WILD-TYPE    9   13
        clus
vv       GLRB MUTATED GLRB WILD-TYPE
  CLUS_1            5              9
  CLUS_2            4             13
D14V3, binary
                cls
clus              0  1
  GLRB MUTATED    3  3
  GLRB WILD-TYPE  4 13
[1] "tbl2"
                cls
clus             [,1] [,2]
  GLRB MUTATED      3    3
  GLRB WILD-TYPE    4   13
        clus
vv       GLRB MUTATED GLRB WILD-TYPE
  CLUS_1            3              4
  CLUS_2            3             13
D14V4, binary
                cls
clus              0  1
  GLRB MUTATED    2  4
  GLRB WILD-TYPE  2 15
[1] "tbl2"
                cls
clus             [,1] [,2]
  GLRB MUTATED      2    4
  GLRB WILD-TYPE    2   15
        clus
vv       GLRB MUTATED GLRB WILD-TYPE
  CLUS_1            2              2
  CLUS_2            4             15
D14V5, multiclass
        clus
vv       GLRB MUTATED GLRB WILD-TYPE
  CLUS_1            2              6
  CLUS_2            4              7
  CLUS_3            3              9
D14V6, multiclass
        clus
vv       GLRB MUTATED GLRB WILD-TYPE
  CLUS_1            2              4
  CLUS_2            2              6
  CLUS_3            2              5
  CLUS_4            3              7
D14V7, binary
                cls
clus              0  1
  GLRB MUTATED    5  4
  GLRB WILD-TYPE 11 11
[1] "tbl2"
                cls
clus             [,1] [,2]
  GLRB MUTATED      5    4
  GLRB WILD-TYPE   11   11
        clus
vv       GLRB MUTATED GLRB WILD-TYPE
  CLUS_1            5             11
  CLUS_2            4             11
D14V8, multiclass

Clustering(15) Variable = FAM58A MUTATION ANALYSIS
D15V1, binary
                  cls
clus                0  1
  FAM58A MUTATED    3  2
  FAM58A WILD-TYPE 13 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  FAM58A MUTATED      3    2
  FAM58A WILD-TYPE   13   13
        clus
vv       FAM58A MUTATED FAM58A WILD-TYPE
  CLUS_1              3               13
  CLUS_2              2               13
D15V2, binary
                  cls
clus                0  1
  FAM58A MUTATED    4  1
  FAM58A WILD-TYPE 10 16
[1] "tbl2"
                  cls
clus               [,1] [,2]
  FAM58A MUTATED      4    1
  FAM58A WILD-TYPE   10   16
        clus
vv       FAM58A MUTATED FAM58A WILD-TYPE
  CLUS_1              4               10
  CLUS_2              1               16
D15V3, binary
                  cls
clus                0  1
  FAM58A MUTATED    2  1
  FAM58A WILD-TYPE  5 15
[1] "tbl2"
                  cls
clus               [,1] [,2]
  FAM58A MUTATED      2    1
  FAM58A WILD-TYPE    5   15
        clus
vv       FAM58A MUTATED FAM58A WILD-TYPE
  CLUS_1              2                5
  CLUS_2              1               15
D15V4, binary
                  cls
clus                0  1
  FAM58A MUTATED    1  2
  FAM58A WILD-TYPE  3 17
[1] "tbl2"
                  cls
clus               [,1] [,2]
  FAM58A MUTATED      1    2
  FAM58A WILD-TYPE    3   17
        clus
vv       FAM58A MUTATED FAM58A WILD-TYPE
  CLUS_1              1                3
  CLUS_2              2               17
D15V5, multiclass
        clus
vv       FAM58A MUTATED FAM58A WILD-TYPE
  CLUS_1              0                8
  CLUS_2              3                8
  CLUS_3              2               10
D15V6, multiclass
        clus
vv       FAM58A MUTATED FAM58A WILD-TYPE
  CLUS_1              1                5
  CLUS_2              2                6
  CLUS_3              1                6
  CLUS_4              1                9
D15V7, binary
                  cls
clus                0  1
  FAM58A MUTATED    3  2
  FAM58A WILD-TYPE 13 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  FAM58A MUTATED      3    2
  FAM58A WILD-TYPE   13   13
        clus
vv       FAM58A MUTATED FAM58A WILD-TYPE
  CLUS_1              3               13
  CLUS_2              2               13
D15V8, multiclass

Clustering(16) Variable = EPHA6 MUTATION ANALYSIS
D16V1, binary
                 cls
clus               0  1
  EPHA6 MUTATED   10  5
  EPHA6 WILD-TYPE  6 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  EPHA6 MUTATED     10    5
  EPHA6 WILD-TYPE    6   10
        clus
vv       EPHA6 MUTATED EPHA6 WILD-TYPE
  CLUS_1            10               6
  CLUS_2             5              10
D16V2, binary
                 cls
clus               0  1
  EPHA6 MUTATED    9  6
  EPHA6 WILD-TYPE  5 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  EPHA6 MUTATED      9    6
  EPHA6 WILD-TYPE    5   11
        clus
vv       EPHA6 MUTATED EPHA6 WILD-TYPE
  CLUS_1             9               5
  CLUS_2             6              11
D16V3, binary
                 cls
clus              0 1
  EPHA6 MUTATED   3 8
  EPHA6 WILD-TYPE 4 8
[1] "tbl2"
                 cls
clus              [,1] [,2]
  EPHA6 MUTATED      3    8
  EPHA6 WILD-TYPE    4    8
        clus
vv       EPHA6 MUTATED EPHA6 WILD-TYPE
  CLUS_1             3               4
  CLUS_2             8               8
D16V4, binary
                 cls
clus               0  1
  EPHA6 MUTATED    0 11
  EPHA6 WILD-TYPE  4  8
[1] "tbl2"
                 cls
clus              [,1] [,2]
  EPHA6 MUTATED      0   11
  EPHA6 WILD-TYPE    4    8
        clus
vv       EPHA6 MUTATED EPHA6 WILD-TYPE
  CLUS_1             0               4
  CLUS_2            11               8
D16V5, multiclass
        clus
vv       EPHA6 MUTATED EPHA6 WILD-TYPE
  CLUS_1             5               3
  CLUS_2             8               3
  CLUS_3             2              10
D16V6, multiclass
        clus
vv       EPHA6 MUTATED EPHA6 WILD-TYPE
  CLUS_1             5               1
  CLUS_2             5               3
  CLUS_3             0               7
  CLUS_4             5               5
D16V7, binary
                 cls
clus              0 1
  EPHA6 MUTATED   8 7
  EPHA6 WILD-TYPE 8 8
[1] "tbl2"
                 cls
clus              [,1] [,2]
  EPHA6 MUTATED      8    7
  EPHA6 WILD-TYPE    8    8
        clus
vv       EPHA6 MUTATED EPHA6 WILD-TYPE
  CLUS_1             8               8
  CLUS_2             7               8
D16V8, multiclass

Clustering(17) Variable = NAP1L2 MUTATION ANALYSIS
D17V1, binary
                  cls
clus                0  1
  NAP1L2 MUTATED    3  6
  NAP1L2 WILD-TYPE 13  9
[1] "tbl2"
                  cls
clus               [,1] [,2]
  NAP1L2 MUTATED      3    6
  NAP1L2 WILD-TYPE   13    9
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              3               13
  CLUS_2              6                9
D17V2, binary
                  cls
clus                0  1
  NAP1L2 MUTATED    3  6
  NAP1L2 WILD-TYPE 11 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  NAP1L2 MUTATED      3    6
  NAP1L2 WILD-TYPE   11   11
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              3               11
  CLUS_2              6               11
D17V3, binary
                  cls
clus                0  1
  NAP1L2 MUTATED    2  5
  NAP1L2 WILD-TYPE  5 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  NAP1L2 MUTATED      2    5
  NAP1L2 WILD-TYPE    5   11
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              2                5
  CLUS_2              5               11
D17V4, binary
                  cls
clus                0  1
  NAP1L2 MUTATED    1  6
  NAP1L2 WILD-TYPE  3 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  NAP1L2 MUTATED      1    6
  NAP1L2 WILD-TYPE    3   13
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              1                3
  CLUS_2              6               13
D17V5, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              3                5
  CLUS_2              2                9
  CLUS_3              4                8
D17V6, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              1                5
  CLUS_2              1                7
  CLUS_3              1                6
  CLUS_4              6                4
D17V7, binary
                  cls
clus                0  1
  NAP1L2 MUTATED    4  5
  NAP1L2 WILD-TYPE 12 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  NAP1L2 MUTATED      4    5
  NAP1L2 WILD-TYPE   12   10
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              4               12
  CLUS_2              5               10
D17V8, multiclass

Clustering(18) Variable = OR4K5 MUTATION ANALYSIS
D18V1, binary
                 cls
clus               0  1
  OR4K5 MUTATED    5  5
  OR4K5 WILD-TYPE 11 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR4K5 MUTATED      5    5
  OR4K5 WILD-TYPE   11   10
        clus
vv       OR4K5 MUTATED OR4K5 WILD-TYPE
  CLUS_1             5              11
  CLUS_2             5              10
D18V2, binary
                 cls
clus               0  1
  OR4K5 MUTATED    4  6
  OR4K5 WILD-TYPE 10 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR4K5 MUTATED      4    6
  OR4K5 WILD-TYPE   10   11
        clus
vv       OR4K5 MUTATED OR4K5 WILD-TYPE
  CLUS_1             4              10
  CLUS_2             6              11
D18V3, binary
                 cls
clus               0  1
  OR4K5 MUTATED    3  5
  OR4K5 WILD-TYPE  4 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR4K5 MUTATED      3    5
  OR4K5 WILD-TYPE    4   11
        clus
vv       OR4K5 MUTATED OR4K5 WILD-TYPE
  CLUS_1             3               4
  CLUS_2             5              11
D18V4, binary
                 cls
clus               0  1
  OR4K5 MUTATED    2  6
  OR4K5 WILD-TYPE  2 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR4K5 MUTATED      2    6
  OR4K5 WILD-TYPE    2   13
        clus
vv       OR4K5 MUTATED OR4K5 WILD-TYPE
  CLUS_1             2               2
  CLUS_2             6              13
D18V5, multiclass
        clus
vv       OR4K5 MUTATED OR4K5 WILD-TYPE
  CLUS_1             1               7
  CLUS_2             4               7
  CLUS_3             5               7
D18V6, multiclass
        clus
vv       OR4K5 MUTATED OR4K5 WILD-TYPE
  CLUS_1             2               4
  CLUS_2             2               6
  CLUS_3             2               5
  CLUS_4             4               6
D18V7, binary
                 cls
clus               0  1
  OR4K5 MUTATED    5  5
  OR4K5 WILD-TYPE 11 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR4K5 MUTATED      5    5
  OR4K5 WILD-TYPE   11   10
        clus
vv       OR4K5 MUTATED OR4K5 WILD-TYPE
  CLUS_1             5              11
  CLUS_2             5              10
D18V8, multiclass

Clustering(19) Variable = SLC9A11 MUTATION ANALYSIS
D19V1, binary
                   cls
clus                0 1
  SLC9A11 MUTATED   7 6
  SLC9A11 WILD-TYPE 9 9
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC9A11 MUTATED      7    6
  SLC9A11 WILD-TYPE    9    9
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               7                 9
  CLUS_2               6                 9
D19V2, binary
                   cls
clus                 0  1
  SLC9A11 MUTATED    3 10
  SLC9A11 WILD-TYPE 11  7
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC9A11 MUTATED      3   10
  SLC9A11 WILD-TYPE   11    7
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               3                11
  CLUS_2              10                 7
D19V3, binary
                   cls
clus                0 1
  SLC9A11 MUTATED   2 9
  SLC9A11 WILD-TYPE 5 7
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC9A11 MUTATED      2    9
  SLC9A11 WILD-TYPE    5    7
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               2                 5
  CLUS_2               9                 7
D19V4, binary
                   cls
clus                 0  1
  SLC9A11 MUTATED    1 10
  SLC9A11 WILD-TYPE  3  9
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC9A11 MUTATED      1   10
  SLC9A11 WILD-TYPE    3    9
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               1                 3
  CLUS_2              10                 9
D19V5, multiclass
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               4                 4
  CLUS_2               5                 6
  CLUS_3               4                 8
D19V6, multiclass
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               2                 4
  CLUS_2               3                 5
  CLUS_3               2                 5
  CLUS_4               6                 4
D19V7, binary
                   cls
clus                 0  1
  SLC9A11 MUTATED    5  8
  SLC9A11 WILD-TYPE 11  7
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC9A11 MUTATED      5    8
  SLC9A11 WILD-TYPE   11    7
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               5                11
  CLUS_2               8                 7
D19V8, multiclass

Clustering(20) Variable = ADAMTS20 MUTATION ANALYSIS
D20V1, binary
                    cls
clus                 0 1
  ADAMTS20 MUTATED   9 9
  ADAMTS20 WILD-TYPE 7 6
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  ADAMTS20 MUTATED      9    9
  ADAMTS20 WILD-TYPE    7    6
        clus
vv       ADAMTS20 MUTATED ADAMTS20 WILD-TYPE
  CLUS_1                9                  7
  CLUS_2                9                  6
D20V2, binary
                    cls
clus                  0  1
  ADAMTS20 MUTATED    7 11
  ADAMTS20 WILD-TYPE  7  6
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  ADAMTS20 MUTATED      7   11
  ADAMTS20 WILD-TYPE    7    6
        clus
vv       ADAMTS20 MUTATED ADAMTS20 WILD-TYPE
  CLUS_1                7                  7
  CLUS_2               11                  6
D20V3, binary
                    cls
clus                  0  1
  ADAMTS20 MUTATED    5 10
  ADAMTS20 WILD-TYPE  2  6
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  ADAMTS20 MUTATED      5   10
  ADAMTS20 WILD-TYPE    2    6
        clus
vv       ADAMTS20 MUTATED ADAMTS20 WILD-TYPE
  CLUS_1                5                  2
  CLUS_2               10                  6
D20V4, binary
                    cls
clus                  0  1
  ADAMTS20 MUTATED    3 12
  ADAMTS20 WILD-TYPE  1  7
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  ADAMTS20 MUTATED      3   12
  ADAMTS20 WILD-TYPE    1    7
        clus
vv       ADAMTS20 MUTATED ADAMTS20 WILD-TYPE
  CLUS_1                3                  1
  CLUS_2               12                  7
D20V5, multiclass
        clus
vv       ADAMTS20 MUTATED ADAMTS20 WILD-TYPE
  CLUS_1                3                  5
  CLUS_2                8                  3
  CLUS_3                7                  5
D20V6, multiclass
        clus
vv       ADAMTS20 MUTATED ADAMTS20 WILD-TYPE
  CLUS_1                4                  2
  CLUS_2                5                  3
  CLUS_3                3                  4
  CLUS_4                6                  4
D20V7, binary
                    cls
clus                  0  1
  ADAMTS20 MUTATED    8 10
  ADAMTS20 WILD-TYPE  8  5
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  ADAMTS20 MUTATED      8   10
  ADAMTS20 WILD-TYPE    8    5
        clus
vv       ADAMTS20 MUTATED ADAMTS20 WILD-TYPE
  CLUS_1                8                  8
  CLUS_2               10                  5
D20V8, multiclass

Clustering(21) Variable = SLC38A4 MUTATION ANALYSIS
D21V1, binary
                   cls
clus                 0  1
  SLC38A4 MUTATED    9  4
  SLC38A4 WILD-TYPE  7 11
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC38A4 MUTATED      9    4
  SLC38A4 WILD-TYPE    7   11
        clus
vv       SLC38A4 MUTATED SLC38A4 WILD-TYPE
  CLUS_1               9                 7
  CLUS_2               4                11
D21V2, binary
                   cls
clus                 0  1
  SLC38A4 MUTATED   10  3
  SLC38A4 WILD-TYPE  4 14
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC38A4 MUTATED     10    3
  SLC38A4 WILD-TYPE    4   14
        clus
vv       SLC38A4 MUTATED SLC38A4 WILD-TYPE
  CLUS_1              10                 4
  CLUS_2               3                14
D21V3, binary
                   cls
clus                0 1
  SLC38A4 MUTATED   2 8
  SLC38A4 WILD-TYPE 5 8
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC38A4 MUTATED      2    8
  SLC38A4 WILD-TYPE    5    8
        clus
vv       SLC38A4 MUTATED SLC38A4 WILD-TYPE
  CLUS_1               2                 5
  CLUS_2               8                 8
D21V4, binary
                   cls
clus                 0  1
  SLC38A4 MUTATED    2  8
  SLC38A4 WILD-TYPE  2 11
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC38A4 MUTATED      2    8
  SLC38A4 WILD-TYPE    2   11
        clus
vv       SLC38A4 MUTATED SLC38A4 WILD-TYPE
  CLUS_1               2                 2
  CLUS_2               8                11
D21V5, multiclass
        clus
vv       SLC38A4 MUTATED SLC38A4 WILD-TYPE
  CLUS_1               4                 4
  CLUS_2               7                 4
  CLUS_3               2                10
D21V6, multiclass
        clus
vv       SLC38A4 MUTATED SLC38A4 WILD-TYPE
  CLUS_1               4                 2
  CLUS_2               4                 4
  CLUS_3               2                 5
  CLUS_4               3                 7
D21V7, binary
                   cls
clus                0 1
  SLC38A4 MUTATED   7 6
  SLC38A4 WILD-TYPE 9 9
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC38A4 MUTATED      7    6
  SLC38A4 WILD-TYPE    9    9
        clus
vv       SLC38A4 MUTATED SLC38A4 WILD-TYPE
  CLUS_1               7                 9
  CLUS_2               6                 9
D21V8, multiclass

Clustering(22) Variable = OR2T2 MUTATION ANALYSIS
D22V1, binary
                 cls
clus               0  1
  OR2T2 MUTATED    5  3
  OR2T2 WILD-TYPE 11 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR2T2 MUTATED      5    3
  OR2T2 WILD-TYPE   11   12
        clus
vv       OR2T2 MUTATED OR2T2 WILD-TYPE
  CLUS_1             5              11
  CLUS_2             3              12
D22V2, binary
                 cls
clus               0  1
  OR2T2 MUTATED    4  4
  OR2T2 WILD-TYPE 10 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR2T2 MUTATED      4    4
  OR2T2 WILD-TYPE   10   13
        clus
vv       OR2T2 MUTATED OR2T2 WILD-TYPE
  CLUS_1             4              10
  CLUS_2             4              13
D22V3, binary
                 cls
clus               0  1
  OR2T2 MUTATED    2  4
  OR2T2 WILD-TYPE  5 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR2T2 MUTATED      2    4
  OR2T2 WILD-TYPE    5   12
        clus
vv       OR2T2 MUTATED OR2T2 WILD-TYPE
  CLUS_1             2               5
  CLUS_2             4              12
D22V4, binary
                 cls
clus               0  1
  OR2T2 MUTATED    2  4
  OR2T2 WILD-TYPE  2 15
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR2T2 MUTATED      2    4
  OR2T2 WILD-TYPE    2   15
        clus
vv       OR2T2 MUTATED OR2T2 WILD-TYPE
  CLUS_1             2               2
  CLUS_2             4              15
D22V5, multiclass
        clus
vv       OR2T2 MUTATED OR2T2 WILD-TYPE
  CLUS_1             2               6
  CLUS_2             4               7
  CLUS_3             2              10
D22V6, multiclass
        clus
vv       OR2T2 MUTATED OR2T2 WILD-TYPE
  CLUS_1             2               4
  CLUS_2             2               6
  CLUS_3             2               5
  CLUS_4             2               8
D22V7, binary
                 cls
clus               0  1
  OR2T2 MUTATED    5  3
  OR2T2 WILD-TYPE 11 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR2T2 MUTATED      5    3
  OR2T2 WILD-TYPE   11   12
        clus
vv       OR2T2 MUTATED OR2T2 WILD-TYPE
  CLUS_1             5              11
  CLUS_2             3              12
D22V8, multiclass

Clustering(23) Variable = PRB2 MUTATION ANALYSIS
D23V1, binary
                cls
clus              0  1
  PRB2 MUTATED    7  4
  PRB2 WILD-TYPE  9 11
[1] "tbl2"
                cls
clus             [,1] [,2]
  PRB2 MUTATED      7    4
  PRB2 WILD-TYPE    9   11
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            7              9
  CLUS_2            4             11
D23V2, binary
                cls
clus              0  1
  PRB2 MUTATED    6  5
  PRB2 WILD-TYPE  8 12
[1] "tbl2"
                cls
clus             [,1] [,2]
  PRB2 MUTATED      6    5
  PRB2 WILD-TYPE    8   12
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            6              8
  CLUS_2            5             12
D23V3, binary
                cls
clus              0  1
  PRB2 MUTATED    3  6
  PRB2 WILD-TYPE  4 10
[1] "tbl2"
                cls
clus             [,1] [,2]
  PRB2 MUTATED      3    6
  PRB2 WILD-TYPE    4   10
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            3              4
  CLUS_2            6             10
D23V4, binary
                cls
clus              0  1
  PRB2 MUTATED    1  8
  PRB2 WILD-TYPE  3 11
[1] "tbl2"
                cls
clus             [,1] [,2]
  PRB2 MUTATED      1    8
  PRB2 WILD-TYPE    3   11
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            1              3
  CLUS_2            8             11
D23V5, multiclass
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            3              5
  CLUS_2            6              5
  CLUS_3            2             10
D23V6, multiclass
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            2              4
  CLUS_2            5              3
  CLUS_3            1              6
  CLUS_4            3              7
D23V7, binary
                cls
clus              0  1
  PRB2 MUTATED    6  5
  PRB2 WILD-TYPE 10 10
[1] "tbl2"
                cls
clus             [,1] [,2]
  PRB2 MUTATED      6    5
  PRB2 WILD-TYPE   10   10
        clus
vv       PRB2 MUTATED PRB2 WILD-TYPE
  CLUS_1            6             10
  CLUS_2            5             10
D23V8, multiclass

Clustering(24) Variable = COL21A1 MUTATION ANALYSIS
D24V1, binary
                   cls
clus                 0  1
  COL21A1 MUTATED    7  5
  COL21A1 WILD-TYPE  9 10
[1] "tbl2"
                   cls
clus                [,1] [,2]
  COL21A1 MUTATED      7    5
  COL21A1 WILD-TYPE    9   10
        clus
vv       COL21A1 MUTATED COL21A1 WILD-TYPE
  CLUS_1               7                 9
  CLUS_2               5                10
D24V2, binary
                   cls
clus                 0  1
  COL21A1 MUTATED    7  5
  COL21A1 WILD-TYPE  7 12
[1] "tbl2"
                   cls
clus                [,1] [,2]
  COL21A1 MUTATED      7    5
  COL21A1 WILD-TYPE    7   12
        clus
vv       COL21A1 MUTATED COL21A1 WILD-TYPE
  CLUS_1               7                 7
  CLUS_2               5                12
D24V3, binary
                   cls
clus                0 1
  COL21A1 MUTATED   0 8
  COL21A1 WILD-TYPE 7 8
[1] "tbl2"
                   cls
clus                [,1] [,2]
  COL21A1 MUTATED      0    8
  COL21A1 WILD-TYPE    7    8
        clus
vv       COL21A1 MUTATED COL21A1 WILD-TYPE
  CLUS_1               0                 7
  CLUS_2               8                 8
D24V4, binary
                   cls
clus                 0  1
  COL21A1 MUTATED    0  8
  COL21A1 WILD-TYPE  4 11
[1] "tbl2"
                   cls
clus                [,1] [,2]
  COL21A1 MUTATED      0    8
  COL21A1 WILD-TYPE    4   11
        clus
vv       COL21A1 MUTATED COL21A1 WILD-TYPE
  CLUS_1               0                 4
  CLUS_2               8                11
D24V5, multiclass
        clus
vv       COL21A1 MUTATED COL21A1 WILD-TYPE
  CLUS_1               1                 7
  CLUS_2               5                 6
  CLUS_3               6                 6
D24V6, multiclass
        clus
vv       COL21A1 MUTATED COL21A1 WILD-TYPE
  CLUS_1               3                 3
  CLUS_2               2                 6
  CLUS_3               2                 5
  CLUS_4               5                 5
D24V7, binary
                   cls
clus                 0  1
  COL21A1 MUTATED    5  7
  COL21A1 WILD-TYPE 11  8
[1] "tbl2"
                   cls
clus                [,1] [,2]
  COL21A1 MUTATED      5    7
  COL21A1 WILD-TYPE   11    8
        clus
vv       COL21A1 MUTATED COL21A1 WILD-TYPE
  CLUS_1               5                11
  CLUS_2               7                 8
D24V8, multiclass

Clustering(25) Variable = OR4N2 MUTATION ANALYSIS
D25V1, binary
                 cls
clus               0  1
  OR4N2 MUTATED    6  4
  OR4N2 WILD-TYPE 10 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR4N2 MUTATED      6    4
  OR4N2 WILD-TYPE   10   11
        clus
vv       OR4N2 MUTATED OR4N2 WILD-TYPE
  CLUS_1             6              10
  CLUS_2             4              11
D25V2, binary
                 cls
clus               0  1
  OR4N2 MUTATED    7  3
  OR4N2 WILD-TYPE  7 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR4N2 MUTATED      7    3
  OR4N2 WILD-TYPE    7   14
        clus
vv       OR4N2 MUTATED OR4N2 WILD-TYPE
  CLUS_1             7               7
  CLUS_2             3              14
D25V3, binary
                 cls
clus               0  1
  OR4N2 MUTATED    2  6
  OR4N2 WILD-TYPE  5 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR4N2 MUTATED      2    6
  OR4N2 WILD-TYPE    5   10
        clus
vv       OR4N2 MUTATED OR4N2 WILD-TYPE
  CLUS_1             2               5
  CLUS_2             6              10
D25V4, binary
                 cls
clus               0  1
  OR4N2 MUTATED    2  6
  OR4N2 WILD-TYPE  2 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR4N2 MUTATED      2    6
  OR4N2 WILD-TYPE    2   13
        clus
vv       OR4N2 MUTATED OR4N2 WILD-TYPE
  CLUS_1             2               2
  CLUS_2             6              13
D25V5, multiclass
        clus
vv       OR4N2 MUTATED OR4N2 WILD-TYPE
  CLUS_1             1               7
  CLUS_2             4               7
  CLUS_3             5               7
D25V6, multiclass
        clus
vv       OR4N2 MUTATED OR4N2 WILD-TYPE
  CLUS_1             2               4
  CLUS_2             2               6
  CLUS_3             3               4
  CLUS_4             3               7
D25V7, binary
                 cls
clus               0  1
  OR4N2 MUTATED    5  5
  OR4N2 WILD-TYPE 11 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR4N2 MUTATED      5    5
  OR4N2 WILD-TYPE   11   10
        clus
vv       OR4N2 MUTATED OR4N2 WILD-TYPE
  CLUS_1             5              11
  CLUS_2             5              10
D25V8, multiclass

Clustering(26) Variable = PROX1 MUTATION ANALYSIS
D26V1, binary
                 cls
clus               0  1
  PROX1 MUTATED    4  3
  PROX1 WILD-TYPE 12 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PROX1 MUTATED      4    3
  PROX1 WILD-TYPE   12   12
        clus
vv       PROX1 MUTATED PROX1 WILD-TYPE
  CLUS_1             4              12
  CLUS_2             3              12
D26V2, binary
                 cls
clus               0  1
  PROX1 MUTATED    5  2
  PROX1 WILD-TYPE  9 15
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PROX1 MUTATED      5    2
  PROX1 WILD-TYPE    9   15
        clus
vv       PROX1 MUTATED PROX1 WILD-TYPE
  CLUS_1             5               9
  CLUS_2             2              15
D26V3, binary
                 cls
clus               0  1
  PROX1 MUTATED    1  5
  PROX1 WILD-TYPE  6 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PROX1 MUTATED      1    5
  PROX1 WILD-TYPE    6   11
        clus
vv       PROX1 MUTATED PROX1 WILD-TYPE
  CLUS_1             1               6
  CLUS_2             5              11
D26V4, binary
                 cls
clus               0  1
  PROX1 MUTATED    1  5
  PROX1 WILD-TYPE  3 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PROX1 MUTATED      1    5
  PROX1 WILD-TYPE    3   14
        clus
vv       PROX1 MUTATED PROX1 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             5              14
D26V5, multiclass
        clus
vv       PROX1 MUTATED PROX1 WILD-TYPE
  CLUS_1             1               7
  CLUS_2             4               7
  CLUS_3             2              10
D26V6, multiclass
        clus
vv       PROX1 MUTATED PROX1 WILD-TYPE
  CLUS_1             0               6
  CLUS_2             4               4
  CLUS_3             1               6
  CLUS_4             2               8
D26V7, binary
                 cls
clus               0  1
  PROX1 MUTATED    2  5
  PROX1 WILD-TYPE 14 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PROX1 MUTATED      2    5
  PROX1 WILD-TYPE   14   10
        clus
vv       PROX1 MUTATED PROX1 WILD-TYPE
  CLUS_1             2              14
  CLUS_2             5              10
D26V8, multiclass

Clustering(27) Variable = ANGPT1 MUTATION ANALYSIS
D27V1, binary
                  cls
clus                0  1
  ANGPT1 MUTATED    5  5
  ANGPT1 WILD-TYPE 11 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ANGPT1 MUTATED      5    5
  ANGPT1 WILD-TYPE   11   10
        clus
vv       ANGPT1 MUTATED ANGPT1 WILD-TYPE
  CLUS_1              5               11
  CLUS_2              5               10
D27V2, binary
                  cls
clus                0  1
  ANGPT1 MUTATED    4  6
  ANGPT1 WILD-TYPE 10 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ANGPT1 MUTATED      4    6
  ANGPT1 WILD-TYPE   10   11
        clus
vv       ANGPT1 MUTATED ANGPT1 WILD-TYPE
  CLUS_1              4               10
  CLUS_2              6               11
D27V3, binary
                  cls
clus                0  1
  ANGPT1 MUTATED    2  5
  ANGPT1 WILD-TYPE  5 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ANGPT1 MUTATED      2    5
  ANGPT1 WILD-TYPE    5   11
        clus
vv       ANGPT1 MUTATED ANGPT1 WILD-TYPE
  CLUS_1              2                5
  CLUS_2              5               11
D27V4, binary
                  cls
clus                0  1
  ANGPT1 MUTATED    1  6
  ANGPT1 WILD-TYPE  3 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ANGPT1 MUTATED      1    6
  ANGPT1 WILD-TYPE    3   13
        clus
vv       ANGPT1 MUTATED ANGPT1 WILD-TYPE
  CLUS_1              1                3
  CLUS_2              6               13
D27V5, multiclass
        clus
vv       ANGPT1 MUTATED ANGPT1 WILD-TYPE
  CLUS_1              3                5
  CLUS_2              5                6
  CLUS_3              2               10
D27V6, multiclass
        clus
vv       ANGPT1 MUTATED ANGPT1 WILD-TYPE
  CLUS_1              4                2
  CLUS_2              3                5
  CLUS_3              1                6
  CLUS_4              2                8
D27V7, binary
                  cls
clus                0  1
  ANGPT1 MUTATED    7  3
  ANGPT1 WILD-TYPE  9 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ANGPT1 MUTATED      7    3
  ANGPT1 WILD-TYPE    9   12
        clus
vv       ANGPT1 MUTATED ANGPT1 WILD-TYPE
  CLUS_1              7                9
  CLUS_2              3               12
D27V8, multiclass

Clustering(28) Variable = C8A MUTATION ANALYSIS
D28V1, binary
               cls
clus             0  1
  C8A MUTATED    8  3
  C8A WILD-TYPE  8 12
[1] "tbl2"
               cls
clus            [,1] [,2]
  C8A MUTATED      8    3
  C8A WILD-TYPE    8   12
        clus
vv       C8A MUTATED C8A WILD-TYPE
  CLUS_1           8             8
  CLUS_2           3            12
D28V2, binary
               cls
clus             0  1
  C8A MUTATED    5  6
  C8A WILD-TYPE  9 11
[1] "tbl2"
               cls
clus            [,1] [,2]
  C8A MUTATED      5    6
  C8A WILD-TYPE    9   11
        clus
vv       C8A MUTATED C8A WILD-TYPE
  CLUS_1           5             9
  CLUS_2           6            11
D28V3, binary
               cls
clus            0 1
  C8A MUTATED   1 7
  C8A WILD-TYPE 6 9
[1] "tbl2"
               cls
clus            [,1] [,2]
  C8A MUTATED      1    7
  C8A WILD-TYPE    6    9
        clus
vv       C8A MUTATED C8A WILD-TYPE
  CLUS_1           1             6
  CLUS_2           7             9
D28V4, binary
               cls
clus             0  1
  C8A MUTATED    1  7
  C8A WILD-TYPE  3 12
[1] "tbl2"
               cls
clus            [,1] [,2]
  C8A MUTATED      1    7
  C8A WILD-TYPE    3   12
        clus
vv       C8A MUTATED C8A WILD-TYPE
  CLUS_1           1             3
  CLUS_2           7            12
D28V5, multiclass
        clus
vv       C8A MUTATED C8A WILD-TYPE
  CLUS_1           1             7
  CLUS_2           6             5
  CLUS_3           4             8
D28V6, multiclass
        clus
vv       C8A MUTATED C8A WILD-TYPE
  CLUS_1           2             4
  CLUS_2           4             4
  CLUS_3           2             5
  CLUS_4           3             7
D28V7, binary
               cls
clus             0  1
  C8A MUTATED    5  6
  C8A WILD-TYPE 11  9
[1] "tbl2"
               cls
clus            [,1] [,2]
  C8A MUTATED      5    6
  C8A WILD-TYPE   11    9
        clus
vv       C8A MUTATED C8A WILD-TYPE
  CLUS_1           5            11
  CLUS_2           6             9
D28V8, multiclass

Clustering(29) Variable = SERPINB11 MUTATION ANALYSIS
D29V1, binary
                     cls
clus                   0  1
  SERPINB11 MUTATED    2  5
  SERPINB11 WILD-TYPE 14 10
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  SERPINB11 MUTATED      2    5
  SERPINB11 WILD-TYPE   14   10
        clus
vv       SERPINB11 MUTATED SERPINB11 WILD-TYPE
  CLUS_1                 2                  14
  CLUS_2                 5                  10
D29V2, binary
                     cls
clus                   0  1
  SERPINB11 MUTATED    4  3
  SERPINB11 WILD-TYPE 10 14
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  SERPINB11 MUTATED      4    3
  SERPINB11 WILD-TYPE   10   14
        clus
vv       SERPINB11 MUTATED SERPINB11 WILD-TYPE
  CLUS_1                 4                  10
  CLUS_2                 3                  14
D29V3, binary
                     cls
clus                   0  1
  SERPINB11 MUTATED    1  4
  SERPINB11 WILD-TYPE  6 12
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  SERPINB11 MUTATED      1    4
  SERPINB11 WILD-TYPE    6   12
        clus
vv       SERPINB11 MUTATED SERPINB11 WILD-TYPE
  CLUS_1                 1                   6
  CLUS_2                 4                  12
D29V4, binary
                     cls
clus                   0  1
  SERPINB11 MUTATED    1  4
  SERPINB11 WILD-TYPE  3 15
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  SERPINB11 MUTATED      1    4
  SERPINB11 WILD-TYPE    3   15
        clus
vv       SERPINB11 MUTATED SERPINB11 WILD-TYPE
  CLUS_1                 1                   3
  CLUS_2                 4                  15
D29V5, multiclass
        clus
vv       SERPINB11 MUTATED SERPINB11 WILD-TYPE
  CLUS_1                 2                   6
  CLUS_2                 1                  10
  CLUS_3                 4                   8
D29V6, multiclass
        clus
vv       SERPINB11 MUTATED SERPINB11 WILD-TYPE
  CLUS_1                 1                   5
  CLUS_2                 1                   7
  CLUS_3                 2                   5
  CLUS_4                 3                   7
D29V7, binary
                     cls
clus                   0  1
  SERPINB11 MUTATED    4  3
  SERPINB11 WILD-TYPE 12 12
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  SERPINB11 MUTATED      4    3
  SERPINB11 WILD-TYPE   12   12
        clus
vv       SERPINB11 MUTATED SERPINB11 WILD-TYPE
  CLUS_1                 4                  12
  CLUS_2                 3                  12
D29V8, multiclass

Clustering(30) Variable = C18ORF34 MUTATION ANALYSIS
D30V1, binary
                    cls
clus                  0  1
  C18ORF34 MUTATED    7  4
  C18ORF34 WILD-TYPE  9 11
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C18ORF34 MUTATED      7    4
  C18ORF34 WILD-TYPE    9   11
        clus
vv       C18ORF34 MUTATED C18ORF34 WILD-TYPE
  CLUS_1                7                  9
  CLUS_2                4                 11
D30V2, binary
                    cls
clus                  0  1
  C18ORF34 MUTATED    5  6
  C18ORF34 WILD-TYPE  9 11
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C18ORF34 MUTATED      5    6
  C18ORF34 WILD-TYPE    9   11
        clus
vv       C18ORF34 MUTATED C18ORF34 WILD-TYPE
  CLUS_1                5                  9
  CLUS_2                6                 11
D30V3, binary
                    cls
clus                  0  1
  C18ORF34 MUTATED    3  5
  C18ORF34 WILD-TYPE  4 11
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C18ORF34 MUTATED      3    5
  C18ORF34 WILD-TYPE    4   11
        clus
vv       C18ORF34 MUTATED C18ORF34 WILD-TYPE
  CLUS_1                3                  4
  CLUS_2                5                 11
D30V4, binary
                    cls
clus                  0  1
  C18ORF34 MUTATED    1  7
  C18ORF34 WILD-TYPE  3 12
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C18ORF34 MUTATED      1    7
  C18ORF34 WILD-TYPE    3   12
        clus
vv       C18ORF34 MUTATED C18ORF34 WILD-TYPE
  CLUS_1                1                  3
  CLUS_2                7                 12
D30V5, multiclass
        clus
vv       C18ORF34 MUTATED C18ORF34 WILD-TYPE
  CLUS_1                1                  7
  CLUS_2                6                  5
  CLUS_3                4                  8
D30V6, multiclass
        clus
vv       C18ORF34 MUTATED C18ORF34 WILD-TYPE
  CLUS_1                3                  3
  CLUS_2                4                  4
  CLUS_3                2                  5
  CLUS_4                2                  8
D30V7, binary
                    cls
clus                  0  1
  C18ORF34 MUTATED    5  6
  C18ORF34 WILD-TYPE 11  9
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C18ORF34 MUTATED      5    6
  C18ORF34 WILD-TYPE   11    9
        clus
vv       C18ORF34 MUTATED C18ORF34 WILD-TYPE
  CLUS_1                5                 11
  CLUS_2                6                  9
D30V8, multiclass

Clustering(31) Variable = FRG2B MUTATION ANALYSIS
D31V1, binary
                 cls
clus               0  1
  FRG2B MUTATED    4  3
  FRG2B WILD-TYPE 12 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  FRG2B MUTATED      4    3
  FRG2B WILD-TYPE   12   12
        clus
vv       FRG2B MUTATED FRG2B WILD-TYPE
  CLUS_1             4              12
  CLUS_2             3              12
D31V2, binary
                 cls
clus               0  1
  FRG2B MUTATED    2  5
  FRG2B WILD-TYPE 12 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  FRG2B MUTATED      2    5
  FRG2B WILD-TYPE   12   12
        clus
vv       FRG2B MUTATED FRG2B WILD-TYPE
  CLUS_1             2              12
  CLUS_2             5              12
D31V3, binary
                 cls
clus               0  1
  FRG2B MUTATED    1  4
  FRG2B WILD-TYPE  6 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  FRG2B MUTATED      1    4
  FRG2B WILD-TYPE    6   12
        clus
vv       FRG2B MUTATED FRG2B WILD-TYPE
  CLUS_1             1               6
  CLUS_2             4              12
D31V4, binary
                 cls
clus               0  1
  FRG2B MUTATED    1  4
  FRG2B WILD-TYPE  3 15
[1] "tbl2"
                 cls
clus              [,1] [,2]
  FRG2B MUTATED      1    4
  FRG2B WILD-TYPE    3   15
        clus
vv       FRG2B MUTATED FRG2B WILD-TYPE
  CLUS_1             1               3
  CLUS_2             4              15
D31V5, multiclass
        clus
vv       FRG2B MUTATED FRG2B WILD-TYPE
  CLUS_1             2               6
  CLUS_2             3               8
  CLUS_3             2              10
D31V6, multiclass
        clus
vv       FRG2B MUTATED FRG2B WILD-TYPE
  CLUS_1             1               5
  CLUS_2             2               6
  CLUS_3             1               6
  CLUS_4             3               7
D31V7, binary
                 cls
clus               0  1
  FRG2B MUTATED    4  3
  FRG2B WILD-TYPE 12 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  FRG2B MUTATED      4    3
  FRG2B WILD-TYPE   12   12
        clus
vv       FRG2B MUTATED FRG2B WILD-TYPE
  CLUS_1             4              12
  CLUS_2             3              12
D31V8, multiclass

Clustering(32) Variable = LPPR1 MUTATION ANALYSIS
D32V1, binary
                 cls
clus               0  1
  LPPR1 MUTATED    3  2
  LPPR1 WILD-TYPE 13 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  LPPR1 MUTATED      3    2
  LPPR1 WILD-TYPE   13   13
        clus
vv       LPPR1 MUTATED LPPR1 WILD-TYPE
  CLUS_1             3              13
  CLUS_2             2              13
D32V2, binary
                 cls
clus               0  1
  LPPR1 MUTATED    4  1
  LPPR1 WILD-TYPE 10 16
[1] "tbl2"
                 cls
clus              [,1] [,2]
  LPPR1 MUTATED      4    1
  LPPR1 WILD-TYPE   10   16
        clus
vv       LPPR1 MUTATED LPPR1 WILD-TYPE
  CLUS_1             4              10
  CLUS_2             1              16
D32V3, binary
                 cls
clus               0  1
  LPPR1 MUTATED    2  3
  LPPR1 WILD-TYPE  5 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  LPPR1 MUTATED      2    3
  LPPR1 WILD-TYPE    5   13
        clus
vv       LPPR1 MUTATED LPPR1 WILD-TYPE
  CLUS_1             2               5
  CLUS_2             3              13
D32V4, binary
                 cls
clus               0  1
  LPPR1 MUTATED    1  4
  LPPR1 WILD-TYPE  3 15
[1] "tbl2"
                 cls
clus              [,1] [,2]
  LPPR1 MUTATED      1    4
  LPPR1 WILD-TYPE    3   15
        clus
vv       LPPR1 MUTATED LPPR1 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             4              15
D32V5, multiclass
        clus
vv       LPPR1 MUTATED LPPR1 WILD-TYPE
  CLUS_1             2               6
  CLUS_2             2               9
  CLUS_3             1              11
D32V6, multiclass
        clus
vv       LPPR1 MUTATED LPPR1 WILD-TYPE
  CLUS_1             1               5
  CLUS_2             1               7
  CLUS_3             1               6
  CLUS_4             2               8
D32V7, binary
                 cls
clus               0  1
  LPPR1 MUTATED    3  2
  LPPR1 WILD-TYPE 13 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  LPPR1 MUTATED      3    2
  LPPR1 WILD-TYPE   13   13
        clus
vv       LPPR1 MUTATED LPPR1 WILD-TYPE
  CLUS_1             3              13
  CLUS_2             2              13
D32V8, multiclass

Clustering(33) Variable = THEMIS MUTATION ANALYSIS
D33V1, binary
                  cls
clus                0  1
  THEMIS MUTATED    5  5
  THEMIS WILD-TYPE 11 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  THEMIS MUTATED      5    5
  THEMIS WILD-TYPE   11   10
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              5               11
  CLUS_2              5               10
D33V2, binary
                  cls
clus                0  1
  THEMIS MUTATED    3  7
  THEMIS WILD-TYPE 11 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  THEMIS MUTATED      3    7
  THEMIS WILD-TYPE   11   10
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              3               11
  CLUS_2              7               10
D33V3, binary
                  cls
clus                0  1
  THEMIS MUTATED    2  5
  THEMIS WILD-TYPE  5 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  THEMIS MUTATED      2    5
  THEMIS WILD-TYPE    5   11
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              2                5
  CLUS_2              5               11
D33V4, binary
                  cls
clus                0  1
  THEMIS MUTATED    1  6
  THEMIS WILD-TYPE  3 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  THEMIS MUTATED      1    6
  THEMIS WILD-TYPE    3   13
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              1                3
  CLUS_2              6               13
D33V5, multiclass
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              4                4
  CLUS_2              3                8
  CLUS_3              3                9
D33V6, multiclass
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              1                5
  CLUS_2              3                5
  CLUS_3              2                5
  CLUS_4              4                6
D33V7, binary
                  cls
clus                0  1
  THEMIS MUTATED    5  5
  THEMIS WILD-TYPE 11 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  THEMIS MUTATED      5    5
  THEMIS WILD-TYPE   11   10
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              5               11
  CLUS_2              5               10
D33V8, multiclass

Clustering(34) Variable = SNAP91 MUTATION ANALYSIS
D34V1, binary
                  cls
clus                0  1
  SNAP91 MUTATED    6  4
  SNAP91 WILD-TYPE 10 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  SNAP91 MUTATED      6    4
  SNAP91 WILD-TYPE   10   11
        clus
vv       SNAP91 MUTATED SNAP91 WILD-TYPE
  CLUS_1              6               10
  CLUS_2              4               11
D34V2, binary
                  cls
clus                0  1
  SNAP91 MUTATED    6  4
  SNAP91 WILD-TYPE  8 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  SNAP91 MUTATED      6    4
  SNAP91 WILD-TYPE    8   13
        clus
vv       SNAP91 MUTATED SNAP91 WILD-TYPE
  CLUS_1              6                8
  CLUS_2              4               13
D34V3, binary
                  cls
clus               0 1
  SNAP91 MUTATED   1 7
  SNAP91 WILD-TYPE 6 9
[1] "tbl2"
                  cls
clus               [,1] [,2]
  SNAP91 MUTATED      1    7
  SNAP91 WILD-TYPE    6    9
        clus
vv       SNAP91 MUTATED SNAP91 WILD-TYPE
  CLUS_1              1                6
  CLUS_2              7                9
D34V4, binary
                  cls
clus                0  1
  SNAP91 MUTATED    1  7
  SNAP91 WILD-TYPE  3 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  SNAP91 MUTATED      1    7
  SNAP91 WILD-TYPE    3   12
        clus
vv       SNAP91 MUTATED SNAP91 WILD-TYPE
  CLUS_1              1                3
  CLUS_2              7               12
D34V5, multiclass
        clus
vv       SNAP91 MUTATED SNAP91 WILD-TYPE
  CLUS_1              3                5
  CLUS_2              4                7
  CLUS_3              3                9
D34V6, multiclass
        clus
vv       SNAP91 MUTATED SNAP91 WILD-TYPE
  CLUS_1              3                3
  CLUS_2              2                6
  CLUS_3              2                5
  CLUS_4              3                7
D34V7, binary
                  cls
clus                0  1
  SNAP91 MUTATED    7  3
  SNAP91 WILD-TYPE  9 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  SNAP91 MUTATED      7    3
  SNAP91 WILD-TYPE    9   12
        clus
vv       SNAP91 MUTATED SNAP91 WILD-TYPE
  CLUS_1              7                9
  CLUS_2              3               12
D34V8, multiclass

Clustering(35) Variable = SLC27A6 MUTATION ANALYSIS
D35V1, binary
                   cls
clus                 0  1
  SLC27A6 MUTATED    4  4
  SLC27A6 WILD-TYPE 12 11
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC27A6 MUTATED      4    4
  SLC27A6 WILD-TYPE   12   11
        clus
vv       SLC27A6 MUTATED SLC27A6 WILD-TYPE
  CLUS_1               4                12
  CLUS_2               4                11
D35V2, binary
                   cls
clus                 0  1
  SLC27A6 MUTATED    2  6
  SLC27A6 WILD-TYPE 12 11
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC27A6 MUTATED      2    6
  SLC27A6 WILD-TYPE   12   11
        clus
vv       SLC27A6 MUTATED SLC27A6 WILD-TYPE
  CLUS_1               2                12
  CLUS_2               6                11
D35V3, binary
                   cls
clus                 0  1
  SLC27A6 MUTATED    1  6
  SLC27A6 WILD-TYPE  6 10
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC27A6 MUTATED      1    6
  SLC27A6 WILD-TYPE    6   10
        clus
vv       SLC27A6 MUTATED SLC27A6 WILD-TYPE
  CLUS_1               1                 6
  CLUS_2               6                10
D35V4, binary
                   cls
clus                 0  1
  SLC27A6 MUTATED    1  6
  SLC27A6 WILD-TYPE  3 13
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC27A6 MUTATED      1    6
  SLC27A6 WILD-TYPE    3   13
        clus
vv       SLC27A6 MUTATED SLC27A6 WILD-TYPE
  CLUS_1               1                 3
  CLUS_2               6                13
D35V5, multiclass
        clus
vv       SLC27A6 MUTATED SLC27A6 WILD-TYPE
  CLUS_1               1                 7
  CLUS_2               4                 7
  CLUS_3               3                 9
D35V6, multiclass
        clus
vv       SLC27A6 MUTATED SLC27A6 WILD-TYPE
  CLUS_1               0                 6
  CLUS_2               4                 4
  CLUS_3               1                 6
  CLUS_4               3                 7
D35V7, binary
                   cls
clus                 0  1
  SLC27A6 MUTATED    2  6
  SLC27A6 WILD-TYPE 14  9
[1] "tbl2"
                   cls
clus                [,1] [,2]
  SLC27A6 MUTATED      2    6
  SLC27A6 WILD-TYPE   14    9
        clus
vv       SLC27A6 MUTATED SLC27A6 WILD-TYPE
  CLUS_1               2                14
  CLUS_2               6                 9
D35V8, multiclass

Clustering(36) Variable = CXORF22 MUTATION ANALYSIS
D36V1, binary
                   cls
clus                 0  1
  CXORF22 MUTATED    3  8
  CXORF22 WILD-TYPE 13  7
[1] "tbl2"
                   cls
clus                [,1] [,2]
  CXORF22 MUTATED      3    8
  CXORF22 WILD-TYPE   13    7
        clus
vv       CXORF22 MUTATED CXORF22 WILD-TYPE
  CLUS_1               3                13
  CLUS_2               8                 7
D36V2, binary
                   cls
clus                 0  1
  CXORF22 MUTATED    4  7
  CXORF22 WILD-TYPE 10 10
[1] "tbl2"
                   cls
clus                [,1] [,2]
  CXORF22 MUTATED      4    7
  CXORF22 WILD-TYPE   10   10
        clus
vv       CXORF22 MUTATED CXORF22 WILD-TYPE
  CLUS_1               4                10
  CLUS_2               7                10
D36V3, binary
                   cls
clus                 0  1
  CXORF22 MUTATED    2  6
  CXORF22 WILD-TYPE  5 10
[1] "tbl2"
                   cls
clus                [,1] [,2]
  CXORF22 MUTATED      2    6
  CXORF22 WILD-TYPE    5   10
        clus
vv       CXORF22 MUTATED CXORF22 WILD-TYPE
  CLUS_1               2                 5
  CLUS_2               6                10
D36V4, binary
                   cls
clus                 0  1
  CXORF22 MUTATED    1  7
  CXORF22 WILD-TYPE  3 12
[1] "tbl2"
                   cls
clus                [,1] [,2]
  CXORF22 MUTATED      1    7
  CXORF22 WILD-TYPE    3   12
        clus
vv       CXORF22 MUTATED CXORF22 WILD-TYPE
  CLUS_1               1                 3
  CLUS_2               7                12
D36V5, multiclass
        clus
vv       CXORF22 MUTATED CXORF22 WILD-TYPE
  CLUS_1               6                 2
  CLUS_2               2                 9
  CLUS_3               3                 9
D36V6, multiclass
        clus
vv       CXORF22 MUTATED CXORF22 WILD-TYPE
  CLUS_1               4                 2
  CLUS_2               0                 8
  CLUS_3               1                 6
  CLUS_4               6                 4
D36V7, binary
                   cls
clus                 0  1
  CXORF22 MUTATED    7  4
  CXORF22 WILD-TYPE  9 11
[1] "tbl2"
                   cls
clus                [,1] [,2]
  CXORF22 MUTATED      7    4
  CXORF22 WILD-TYPE    9   11
        clus
vv       CXORF22 MUTATED CXORF22 WILD-TYPE
  CLUS_1               7                 9
  CLUS_2               4                11
D36V8, multiclass

Clustering(37) Variable = NOBOX MUTATION ANALYSIS
D37V1, binary
                 cls
clus               0  1
  NOBOX MUTATED    3  5
  NOBOX WILD-TYPE 13 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  NOBOX MUTATED      3    5
  NOBOX WILD-TYPE   13   10
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             3              13
  CLUS_2             5              10
D37V2, binary
                 cls
clus               0  1
  NOBOX MUTATED    3  5
  NOBOX WILD-TYPE 11 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  NOBOX MUTATED      3    5
  NOBOX WILD-TYPE   11   12
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             3              11
  CLUS_2             5              12
D37V3, binary
                 cls
clus              0 1
  NOBOX MUTATED   1 7
  NOBOX WILD-TYPE 6 9
[1] "tbl2"
                 cls
clus              [,1] [,2]
  NOBOX MUTATED      1    7
  NOBOX WILD-TYPE    6    9
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             1               6
  CLUS_2             7               9
D37V4, binary
                 cls
clus               0  1
  NOBOX MUTATED    1  7
  NOBOX WILD-TYPE  3 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  NOBOX MUTATED      1    7
  NOBOX WILD-TYPE    3   12
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             1               3
  CLUS_2             7              12
D37V5, multiclass
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             3               5
  CLUS_2             3               8
  CLUS_3             2              10
D37V6, multiclass
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             1               5
  CLUS_2             3               5
  CLUS_3             1               6
  CLUS_4             3               7
D37V7, binary
                 cls
clus               0  1
  NOBOX MUTATED    1  7
  NOBOX WILD-TYPE 15  8
[1] "tbl2"
                 cls
clus              [,1] [,2]
  NOBOX MUTATED      1    7
  NOBOX WILD-TYPE   15    8
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             1              15
  CLUS_2             7               8
D37V8, multiclass

Clustering(38) Variable = MUC7 MUTATION ANALYSIS
D38V1, binary
                cls
clus              0  1
  MUC7 MUTATED    5  3
  MUC7 WILD-TYPE 11 12
[1] "tbl2"
                cls
clus             [,1] [,2]
  MUC7 MUTATED      5    3
  MUC7 WILD-TYPE   11   12
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            5             11
  CLUS_2            3             12
D38V2, binary
                cls
clus              0  1
  MUC7 MUTATED    4  4
  MUC7 WILD-TYPE 10 13
[1] "tbl2"
                cls
clus             [,1] [,2]
  MUC7 MUTATED      4    4
  MUC7 WILD-TYPE   10   13
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            4             10
  CLUS_2            4             13
D38V3, binary
                cls
clus              0  1
  MUC7 MUTATED    1  4
  MUC7 WILD-TYPE  6 12
[1] "tbl2"
                cls
clus             [,1] [,2]
  MUC7 MUTATED      1    4
  MUC7 WILD-TYPE    6   12
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            1              6
  CLUS_2            4             12
D38V4, binary
                cls
clus              0  1
  MUC7 MUTATED    1  4
  MUC7 WILD-TYPE  3 15
[1] "tbl2"
                cls
clus             [,1] [,2]
  MUC7 MUTATED      1    4
  MUC7 WILD-TYPE    3   15
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            1              3
  CLUS_2            4             15
D38V5, multiclass
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            3              5
  CLUS_2            4              7
  CLUS_3            1             11
D38V6, multiclass
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            1              5
  CLUS_2            3              5
  CLUS_3            1              6
  CLUS_4            3              7
D38V7, binary
                cls
clus              0  1
  MUC7 MUTATED    4  4
  MUC7 WILD-TYPE 12 11
[1] "tbl2"
                cls
clus             [,1] [,2]
  MUC7 MUTATED      4    4
  MUC7 WILD-TYPE   12   11
        clus
vv       MUC7 MUTATED MUC7 WILD-TYPE
  CLUS_1            4             12
  CLUS_2            4             11
D38V8, multiclass

Clustering(39) Variable = GIMAP7 MUTATION ANALYSIS
D39V1, binary
                  cls
clus                0  1
  GIMAP7 MUTATED    3  3
  GIMAP7 WILD-TYPE 13 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  GIMAP7 MUTATED      3    3
  GIMAP7 WILD-TYPE   13   12
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              3               13
  CLUS_2              3               12
D39V2, binary
                  cls
clus                0  1
  GIMAP7 MUTATED    3  3
  GIMAP7 WILD-TYPE 11 14
[1] "tbl2"
                  cls
clus               [,1] [,2]
  GIMAP7 MUTATED      3    3
  GIMAP7 WILD-TYPE   11   14
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              3               11
  CLUS_2              3               14
D39V3, binary
                  cls
clus                0  1
  GIMAP7 MUTATED    1  4
  GIMAP7 WILD-TYPE  6 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  GIMAP7 MUTATED      1    4
  GIMAP7 WILD-TYPE    6   12
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              1                6
  CLUS_2              4               12
D39V4, binary
                  cls
clus                0  1
  GIMAP7 MUTATED    1  4
  GIMAP7 WILD-TYPE  3 15
[1] "tbl2"
                  cls
clus               [,1] [,2]
  GIMAP7 MUTATED      1    4
  GIMAP7 WILD-TYPE    3   15
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              1                3
  CLUS_2              4               15
D39V5, multiclass
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              0                8
  CLUS_2              3                8
  CLUS_3              3                9
D39V6, multiclass
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              2                4
  CLUS_2              1                7
  CLUS_3              1                6
  CLUS_4              2                8
D39V7, binary
                  cls
clus                0  1
  GIMAP7 MUTATED    3  3
  GIMAP7 WILD-TYPE 13 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  GIMAP7 MUTATED      3    3
  GIMAP7 WILD-TYPE   13   12
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              3               13
  CLUS_2              3               12
D39V8, multiclass

Clustering(40) Variable = SYT17 MUTATION ANALYSIS
D40V1, binary
                 cls
clus               0  1
  SYT17 MUTATED    2  4
  SYT17 WILD-TYPE 14 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SYT17 MUTATED      2    4
  SYT17 WILD-TYPE   14   11
        clus
vv       SYT17 MUTATED SYT17 WILD-TYPE
  CLUS_1             2              14
  CLUS_2             4              11
D40V2, binary
                 cls
clus               0  1
  SYT17 MUTATED    0  6
  SYT17 WILD-TYPE 14 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SYT17 MUTATED      0    6
  SYT17 WILD-TYPE   14   11
        clus
vv       SYT17 MUTATED SYT17 WILD-TYPE
  CLUS_1             0              14
  CLUS_2             6              11
D40V3, binary
                 cls
clus               0  1
  SYT17 MUTATED    1  4
  SYT17 WILD-TYPE  6 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SYT17 MUTATED      1    4
  SYT17 WILD-TYPE    6   12
        clus
vv       SYT17 MUTATED SYT17 WILD-TYPE
  CLUS_1             1               6
  CLUS_2             4              12
D40V4, binary
                 cls
clus               0  1
  SYT17 MUTATED    1  4
  SYT17 WILD-TYPE  3 15
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SYT17 MUTATED      1    4
  SYT17 WILD-TYPE    3   15
        clus
vv       SYT17 MUTATED SYT17 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             4              15
D40V5, multiclass
        clus
vv       SYT17 MUTATED SYT17 WILD-TYPE
  CLUS_1             0               8
  CLUS_2             2               9
  CLUS_3             4               8
D40V6, multiclass
        clus
vv       SYT17 MUTATED SYT17 WILD-TYPE
  CLUS_1             0               6
  CLUS_2             2               6
  CLUS_3             1               6
  CLUS_4             3               7
D40V7, binary
                 cls
clus               0  1
  SYT17 MUTATED    0  6
  SYT17 WILD-TYPE 16  9
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SYT17 MUTATED      0    6
  SYT17 WILD-TYPE   16    9
        clus
vv       SYT17 MUTATED SYT17 WILD-TYPE
  CLUS_1             0              16
  CLUS_2             6               9
D40V8, multiclass

Clustering(41) Variable = ASB15 MUTATION ANALYSIS
D41V1, binary
                 cls
clus               0  1
  ASB15 MUTATED    4  5
  ASB15 WILD-TYPE 12 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  ASB15 MUTATED      4    5
  ASB15 WILD-TYPE   12   10
        clus
vv       ASB15 MUTATED ASB15 WILD-TYPE
  CLUS_1             4              12
  CLUS_2             5              10
D41V2, binary
                 cls
clus               0  1
  ASB15 MUTATED    6  3
  ASB15 WILD-TYPE  8 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  ASB15 MUTATED      6    3
  ASB15 WILD-TYPE    8   14
        clus
vv       ASB15 MUTATED ASB15 WILD-TYPE
  CLUS_1             6               8
  CLUS_2             3              14
D41V3, binary
                 cls
clus               0  1
  ASB15 MUTATED    1  6
  ASB15 WILD-TYPE  6 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  ASB15 MUTATED      1    6
  ASB15 WILD-TYPE    6   10
        clus
vv       ASB15 MUTATED ASB15 WILD-TYPE
  CLUS_1             1               6
  CLUS_2             6              10
D41V4, binary
                 cls
clus               0  1
  ASB15 MUTATED    1  6
  ASB15 WILD-TYPE  3 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  ASB15 MUTATED      1    6
  ASB15 WILD-TYPE    3   13
        clus
vv       ASB15 MUTATED ASB15 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             6              13
D41V5, multiclass
        clus
vv       ASB15 MUTATED ASB15 WILD-TYPE
  CLUS_1             2               6
  CLUS_2             3               8
  CLUS_3             4               8
D41V6, multiclass
        clus
vv       ASB15 MUTATED ASB15 WILD-TYPE
  CLUS_1             3               3
  CLUS_2             1               7
  CLUS_3             2               5
  CLUS_4             3               7
D41V7, binary
                 cls
clus               0  1
  ASB15 MUTATED    5  4
  ASB15 WILD-TYPE 11 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  ASB15 MUTATED      5    4
  ASB15 WILD-TYPE   11   11
        clus
vv       ASB15 MUTATED ASB15 WILD-TYPE
  CLUS_1             5              11
  CLUS_2             4              11
D41V8, multiclass

Clustering(42) Variable = OR4A15 MUTATION ANALYSIS
D42V1, binary
                  cls
clus                0  1
  OR4A15 MUTATED    5  3
  OR4A15 WILD-TYPE 11 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR4A15 MUTATED      5    3
  OR4A15 WILD-TYPE   11   12
        clus
vv       OR4A15 MUTATED OR4A15 WILD-TYPE
  CLUS_1              5               11
  CLUS_2              3               12
D42V2, binary
                  cls
clus                0  1
  OR4A15 MUTATED    4  4
  OR4A15 WILD-TYPE 10 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR4A15 MUTATED      4    4
  OR4A15 WILD-TYPE   10   13
        clus
vv       OR4A15 MUTATED OR4A15 WILD-TYPE
  CLUS_1              4               10
  CLUS_2              4               13
D42V3, binary
                  cls
clus                0  1
  OR4A15 MUTATED    2  4
  OR4A15 WILD-TYPE  5 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR4A15 MUTATED      2    4
  OR4A15 WILD-TYPE    5   12
        clus
vv       OR4A15 MUTATED OR4A15 WILD-TYPE
  CLUS_1              2                5
  CLUS_2              4               12
D42V4, binary
                  cls
clus                0  1
  OR4A15 MUTATED    2  4
  OR4A15 WILD-TYPE  2 15
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR4A15 MUTATED      2    4
  OR4A15 WILD-TYPE    2   15
        clus
vv       OR4A15 MUTATED OR4A15 WILD-TYPE
  CLUS_1              2                2
  CLUS_2              4               15
D42V5, multiclass
        clus
vv       OR4A15 MUTATED OR4A15 WILD-TYPE
  CLUS_1              1                7
  CLUS_2              5                6
  CLUS_3              2               10
D42V6, multiclass
        clus
vv       OR4A15 MUTATED OR4A15 WILD-TYPE
  CLUS_1              1                5
  CLUS_2              4                4
  CLUS_3              2                5
  CLUS_4              1                9
D42V7, binary
                  cls
clus                0  1
  OR4A15 MUTATED    4  4
  OR4A15 WILD-TYPE 12 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR4A15 MUTATED      4    4
  OR4A15 WILD-TYPE   12   11
        clus
vv       OR4A15 MUTATED OR4A15 WILD-TYPE
  CLUS_1              4               12
  CLUS_2              4               11
D42V8, multiclass

Clustering(43) Variable = PROL1 MUTATION ANALYSIS
D43V1, binary
                 cls
clus               0  1
  PROL1 MUTATED    5  4
  PROL1 WILD-TYPE 11 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PROL1 MUTATED      5    4
  PROL1 WILD-TYPE   11   11
        clus
vv       PROL1 MUTATED PROL1 WILD-TYPE
  CLUS_1             5              11
  CLUS_2             4              11
D43V2, binary
                 cls
clus               0  1
  PROL1 MUTATED    6  3
  PROL1 WILD-TYPE  8 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PROL1 MUTATED      6    3
  PROL1 WILD-TYPE    8   14
        clus
vv       PROL1 MUTATED PROL1 WILD-TYPE
  CLUS_1             6               8
  CLUS_2             3              14
D43V3, binary
                 cls
clus               0  1
  PROL1 MUTATED    2  4
  PROL1 WILD-TYPE  5 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PROL1 MUTATED      2    4
  PROL1 WILD-TYPE    5   12
        clus
vv       PROL1 MUTATED PROL1 WILD-TYPE
  CLUS_1             2               5
  CLUS_2             4              12
D43V4, binary
                 cls
clus               0  1
  PROL1 MUTATED    1  5
  PROL1 WILD-TYPE  3 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PROL1 MUTATED      1    5
  PROL1 WILD-TYPE    3   14
        clus
vv       PROL1 MUTATED PROL1 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             5              14
D43V5, multiclass
        clus
vv       PROL1 MUTATED PROL1 WILD-TYPE
  CLUS_1             2               6
  CLUS_2             4               7
  CLUS_3             3               9
D43V6, multiclass
        clus
vv       PROL1 MUTATED PROL1 WILD-TYPE
  CLUS_1             2               4
  CLUS_2             3               5
  CLUS_3             2               5
  CLUS_4             2               8
D43V7, binary
                 cls
clus               0  1
  PROL1 MUTATED    6  3
  PROL1 WILD-TYPE 10 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PROL1 MUTATED      6    3
  PROL1 WILD-TYPE   10   12
        clus
vv       PROL1 MUTATED PROL1 WILD-TYPE
  CLUS_1             6              10
  CLUS_2             3              12
D43V8, multiclass

Clustering(44) Variable = DSG3 MUTATION ANALYSIS
D44V1, binary
                cls
clus             0 1
  DSG3 MUTATED   8 8
  DSG3 WILD-TYPE 8 7
[1] "tbl2"
                cls
clus             [,1] [,2]
  DSG3 MUTATED      8    8
  DSG3 WILD-TYPE    8    7
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            8              8
  CLUS_2            8              7
D44V2, binary
                cls
clus             0 1
  DSG3 MUTATED   8 8
  DSG3 WILD-TYPE 6 9
[1] "tbl2"
                cls
clus             [,1] [,2]
  DSG3 MUTATED      8    8
  DSG3 WILD-TYPE    6    9
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            8              6
  CLUS_2            8              9
D44V3, binary
                cls
clus             0 1
  DSG3 MUTATED   3 8
  DSG3 WILD-TYPE 4 8
[1] "tbl2"
                cls
clus             [,1] [,2]
  DSG3 MUTATED      3    8
  DSG3 WILD-TYPE    4    8
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            3              4
  CLUS_2            8              8
D44V4, binary
                cls
clus              0  1
  DSG3 MUTATED    2  9
  DSG3 WILD-TYPE  2 10
[1] "tbl2"
                cls
clus             [,1] [,2]
  DSG3 MUTATED      2    9
  DSG3 WILD-TYPE    2   10
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            2              2
  CLUS_2            9             10
D44V5, multiclass
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            4              4
  CLUS_2            6              5
  CLUS_3            6              6
D44V6, multiclass
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            4              2
  CLUS_2            4              4
  CLUS_3            3              4
  CLUS_4            5              5
D44V7, binary
                cls
clus             0 1
  DSG3 MUTATED   8 8
  DSG3 WILD-TYPE 8 7
[1] "tbl2"
                cls
clus             [,1] [,2]
  DSG3 MUTATED      8    8
  DSG3 WILD-TYPE    8    7
        clus
vv       DSG3 MUTATED DSG3 WILD-TYPE
  CLUS_1            8              8
  CLUS_2            8              7
D44V8, multiclass

Clustering(45) Variable = OPRK1 MUTATION ANALYSIS
D45V1, binary
                 cls
clus               0  1
  OPRK1 MUTATED    5  4
  OPRK1 WILD-TYPE 11 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OPRK1 MUTATED      5    4
  OPRK1 WILD-TYPE   11   11
        clus
vv       OPRK1 MUTATED OPRK1 WILD-TYPE
  CLUS_1             5              11
  CLUS_2             4              11
D45V2, binary
                 cls
clus               0  1
  OPRK1 MUTATED    4  5
  OPRK1 WILD-TYPE 10 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OPRK1 MUTATED      4    5
  OPRK1 WILD-TYPE   10   12
        clus
vv       OPRK1 MUTATED OPRK1 WILD-TYPE
  CLUS_1             4              10
  CLUS_2             5              12
D45V3, binary
                 cls
clus               0  1
  OPRK1 MUTATED    1  6
  OPRK1 WILD-TYPE  6 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OPRK1 MUTATED      1    6
  OPRK1 WILD-TYPE    6   10
        clus
vv       OPRK1 MUTATED OPRK1 WILD-TYPE
  CLUS_1             1               6
  CLUS_2             6              10
D45V4, binary
                 cls
clus               0  1
  OPRK1 MUTATED    0  7
  OPRK1 WILD-TYPE  4 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OPRK1 MUTATED      0    7
  OPRK1 WILD-TYPE    4   12
        clus
vv       OPRK1 MUTATED OPRK1 WILD-TYPE
  CLUS_1             0               4
  CLUS_2             7              12
D45V5, multiclass
        clus
vv       OPRK1 MUTATED OPRK1 WILD-TYPE
  CLUS_1             3               5
  CLUS_2             5               6
  CLUS_3             1              11
D45V6, multiclass
        clus
vv       OPRK1 MUTATED OPRK1 WILD-TYPE
  CLUS_1             3               3
  CLUS_2             4               4
  CLUS_3             0               7
  CLUS_4             2               8
D45V7, binary
                 cls
clus               0  1
  OPRK1 MUTATED    4  5
  OPRK1 WILD-TYPE 12 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OPRK1 MUTATED      4    5
  OPRK1 WILD-TYPE   12   10
        clus
vv       OPRK1 MUTATED OPRK1 WILD-TYPE
  CLUS_1             4              12
  CLUS_2             5              10
D45V8, multiclass

Clustering(46) Variable = PCSK5 MUTATION ANALYSIS
D46V1, binary
                 cls
clus               0  1
  PCSK5 MUTATED    6  7
  PCSK5 WILD-TYPE 10  8
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PCSK5 MUTATED      6    7
  PCSK5 WILD-TYPE   10    8
        clus
vv       PCSK5 MUTATED PCSK5 WILD-TYPE
  CLUS_1             6              10
  CLUS_2             7               8
D46V2, binary
                 cls
clus              0 1
  PCSK5 MUTATED   5 8
  PCSK5 WILD-TYPE 9 9
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PCSK5 MUTATED      5    8
  PCSK5 WILD-TYPE    9    9
        clus
vv       PCSK5 MUTATED PCSK5 WILD-TYPE
  CLUS_1             5               9
  CLUS_2             8               9
D46V3, binary
                 cls
clus              0 1
  PCSK5 MUTATED   3 8
  PCSK5 WILD-TYPE 4 8
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PCSK5 MUTATED      3    8
  PCSK5 WILD-TYPE    4    8
        clus
vv       PCSK5 MUTATED PCSK5 WILD-TYPE
  CLUS_1             3               4
  CLUS_2             8               8
D46V4, binary
                 cls
clus               0  1
  PCSK5 MUTATED    2  9
  PCSK5 WILD-TYPE  2 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PCSK5 MUTATED      2    9
  PCSK5 WILD-TYPE    2   10
        clus
vv       PCSK5 MUTATED PCSK5 WILD-TYPE
  CLUS_1             2               2
  CLUS_2             9              10
D46V5, multiclass
        clus
vv       PCSK5 MUTATED PCSK5 WILD-TYPE
  CLUS_1             4               4
  CLUS_2             5               6
  CLUS_3             4               8
D46V6, multiclass
        clus
vv       PCSK5 MUTATED PCSK5 WILD-TYPE
  CLUS_1             3               3
  CLUS_2             4               4
  CLUS_3             2               5
  CLUS_4             4               6
D46V7, binary
                 cls
clus               0  1
  PCSK5 MUTATED    6  7
  PCSK5 WILD-TYPE 10  8
[1] "tbl2"
                 cls
clus              [,1] [,2]
  PCSK5 MUTATED      6    7
  PCSK5 WILD-TYPE   10    8
        clus
vv       PCSK5 MUTATED PCSK5 WILD-TYPE
  CLUS_1             6              10
  CLUS_2             7               8
D46V8, multiclass

Clustering(47) Variable = OR52A1 MUTATION ANALYSIS
D47V1, binary
                  cls
clus                0  1
  OR52A1 MUTATED    5  3
  OR52A1 WILD-TYPE 11 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR52A1 MUTATED      5    3
  OR52A1 WILD-TYPE   11   12
        clus
vv       OR52A1 MUTATED OR52A1 WILD-TYPE
  CLUS_1              5               11
  CLUS_2              3               12
D47V2, binary
                  cls
clus                0  1
  OR52A1 MUTATED    4  4
  OR52A1 WILD-TYPE 10 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR52A1 MUTATED      4    4
  OR52A1 WILD-TYPE   10   13
        clus
vv       OR52A1 MUTATED OR52A1 WILD-TYPE
  CLUS_1              4               10
  CLUS_2              4               13
D47V3, binary
                  cls
clus                0  1
  OR52A1 MUTATED    0  4
  OR52A1 WILD-TYPE  7 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR52A1 MUTATED      0    4
  OR52A1 WILD-TYPE    7   12
        clus
vv       OR52A1 MUTATED OR52A1 WILD-TYPE
  CLUS_1              0                7
  CLUS_2              4               12
D47V4, binary
                  cls
clus                0  1
  OR52A1 MUTATED    0  4
  OR52A1 WILD-TYPE  4 15
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR52A1 MUTATED      0    4
  OR52A1 WILD-TYPE    4   15
        clus
vv       OR52A1 MUTATED OR52A1 WILD-TYPE
  CLUS_1              0                4
  CLUS_2              4               15
D47V5, multiclass
        clus
vv       OR52A1 MUTATED OR52A1 WILD-TYPE
  CLUS_1              1                7
  CLUS_2              4                7
  CLUS_3              3                9
D47V6, multiclass
        clus
vv       OR52A1 MUTATED OR52A1 WILD-TYPE
  CLUS_1              2                4
  CLUS_2              2                6
  CLUS_3              1                6
  CLUS_4              3                7
D47V7, binary
                  cls
clus                0  1
  OR52A1 MUTATED    5  3
  OR52A1 WILD-TYPE 11 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  OR52A1 MUTATED      5    3
  OR52A1 WILD-TYPE   11   12
        clus
vv       OR52A1 MUTATED OR52A1 WILD-TYPE
  CLUS_1              5               11
  CLUS_2              3               12
D47V8, multiclass

Clustering(48) Variable = ACSM2B MUTATION ANALYSIS
D48V1, binary
                  cls
clus                0  1
  ACSM2B MUTATED    5  5
  ACSM2B WILD-TYPE 11 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ACSM2B MUTATED      5    5
  ACSM2B WILD-TYPE   11   10
        clus
vv       ACSM2B MUTATED ACSM2B WILD-TYPE
  CLUS_1              5               11
  CLUS_2              5               10
D48V2, binary
                  cls
clus                0  1
  ACSM2B MUTATED    6  4
  ACSM2B WILD-TYPE  8 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ACSM2B MUTATED      6    4
  ACSM2B WILD-TYPE    8   13
        clus
vv       ACSM2B MUTATED ACSM2B WILD-TYPE
  CLUS_1              6                8
  CLUS_2              4               13
D48V3, binary
                  cls
clus                0  1
  ACSM2B MUTATED    2  6
  ACSM2B WILD-TYPE  5 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ACSM2B MUTATED      2    6
  ACSM2B WILD-TYPE    5   10
        clus
vv       ACSM2B MUTATED ACSM2B WILD-TYPE
  CLUS_1              2                5
  CLUS_2              6               10
D48V4, binary
                  cls
clus                0  1
  ACSM2B MUTATED    2  6
  ACSM2B WILD-TYPE  2 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ACSM2B MUTATED      2    6
  ACSM2B WILD-TYPE    2   13
        clus
vv       ACSM2B MUTATED ACSM2B WILD-TYPE
  CLUS_1              2                2
  CLUS_2              6               13
D48V5, multiclass
        clus
vv       ACSM2B MUTATED ACSM2B WILD-TYPE
  CLUS_1              2                6
  CLUS_2              4                7
  CLUS_3              4                8
D48V6, multiclass
        clus
vv       ACSM2B MUTATED ACSM2B WILD-TYPE
  CLUS_1              3                3
  CLUS_2              2                6
  CLUS_3              2                5
  CLUS_4              3                7
D48V7, binary
                  cls
clus                0  1
  ACSM2B MUTATED    6  4
  ACSM2B WILD-TYPE 10 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ACSM2B MUTATED      6    4
  ACSM2B WILD-TYPE   10   11
        clus
vv       ACSM2B MUTATED ACSM2B WILD-TYPE
  CLUS_1              6               10
  CLUS_2              4               11
D48V8, multiclass

Clustering(49) Variable = NOL4 MUTATION ANALYSIS
D49V1, binary
                cls
clus              0  1
  NOL4 MUTATED    7  4
  NOL4 WILD-TYPE  9 11
[1] "tbl2"
                cls
clus             [,1] [,2]
  NOL4 MUTATED      7    4
  NOL4 WILD-TYPE    9   11
        clus
vv       NOL4 MUTATED NOL4 WILD-TYPE
  CLUS_1            7              9
  CLUS_2            4             11
D49V2, binary
                cls
clus              0  1
  NOL4 MUTATED    6  5
  NOL4 WILD-TYPE  8 12
[1] "tbl2"
                cls
clus             [,1] [,2]
  NOL4 MUTATED      6    5
  NOL4 WILD-TYPE    8   12
        clus
vv       NOL4 MUTATED NOL4 WILD-TYPE
  CLUS_1            6              8
  CLUS_2            5             12
D49V3, binary
                cls
clus             0 1
  NOL4 MUTATED   2 8
  NOL4 WILD-TYPE 5 8
[1] "tbl2"
                cls
clus             [,1] [,2]
  NOL4 MUTATED      2    8
  NOL4 WILD-TYPE    5    8
        clus
vv       NOL4 MUTATED NOL4 WILD-TYPE
  CLUS_1            2              5
  CLUS_2            8              8
D49V4, binary
                cls
clus              0  1
  NOL4 MUTATED    1  9
  NOL4 WILD-TYPE  3 10
[1] "tbl2"
                cls
clus             [,1] [,2]
  NOL4 MUTATED      1    9
  NOL4 WILD-TYPE    3   10
        clus
vv       NOL4 MUTATED NOL4 WILD-TYPE
  CLUS_1            1              3
  CLUS_2            9             10
D49V5, multiclass
        clus
vv       NOL4 MUTATED NOL4 WILD-TYPE
  CLUS_1            1              7
  CLUS_2            7              4
  CLUS_3            3              9
D49V6, multiclass
        clus
vv       NOL4 MUTATED NOL4 WILD-TYPE
  CLUS_1            2              4
  CLUS_2            5              3
  CLUS_3            1              6
  CLUS_4            3              7
D49V7, binary
                cls
clus              0  1
  NOL4 MUTATED    3  8
  NOL4 WILD-TYPE 13  7
[1] "tbl2"
                cls
clus             [,1] [,2]
  NOL4 MUTATED      3    8
  NOL4 WILD-TYPE   13    7
        clus
vv       NOL4 MUTATED NOL4 WILD-TYPE
  CLUS_1            3             13
  CLUS_2            8              7
D49V8, multiclass

Clustering(50) Variable = OXA1L MUTATION ANALYSIS
D50V1, binary
                 cls
clus               0  1
  OXA1L MUTATED    2  2
  OXA1L WILD-TYPE 14 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OXA1L MUTATED      2    2
  OXA1L WILD-TYPE   14   13
        clus
vv       OXA1L MUTATED OXA1L WILD-TYPE
  CLUS_1             2              14
  CLUS_2             2              13
D50V2, binary
                 cls
clus               0  1
  OXA1L MUTATED    3  1
  OXA1L WILD-TYPE 11 16
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OXA1L MUTATED      3    1
  OXA1L WILD-TYPE   11   16
        clus
vv       OXA1L MUTATED OXA1L WILD-TYPE
  CLUS_1             3              11
  CLUS_2             1              16
D50V3, binary
                 cls
clus               0  1
  OXA1L MUTATED    0  2
  OXA1L WILD-TYPE  7 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OXA1L MUTATED      0    2
  OXA1L WILD-TYPE    7   14
        clus
vv       OXA1L MUTATED OXA1L WILD-TYPE
  CLUS_1             0               7
  CLUS_2             2              14
D50V4, binary
                 cls
clus               0  1
  OXA1L MUTATED    0  2
  OXA1L WILD-TYPE  4 17
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OXA1L MUTATED      0    2
  OXA1L WILD-TYPE    4   17
        clus
vv       OXA1L MUTATED OXA1L WILD-TYPE
  CLUS_1             0               4
  CLUS_2             2              17
D50V5, multiclass
        clus
vv       OXA1L MUTATED OXA1L WILD-TYPE
  CLUS_1             1               7
  CLUS_2             2               9
  CLUS_3             1              11
D50V6, multiclass
        clus
vv       OXA1L MUTATED OXA1L WILD-TYPE
  CLUS_1             1               5
  CLUS_2             1               7
  CLUS_3             0               7
  CLUS_4             2               8
D50V7, binary
                 cls
clus               0  1
  OXA1L MUTATED    1  3
  OXA1L WILD-TYPE 15 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OXA1L MUTATED      1    3
  OXA1L WILD-TYPE   15   12
        clus
vv       OXA1L MUTATED OXA1L WILD-TYPE
  CLUS_1             1              15
  CLUS_2             3              12
D50V8, multiclass

Clustering(51) Variable = PPFIA2 MUTATION ANALYSIS
D51V1, binary
                  cls
clus                0  1
  PPFIA2 MUTATED    6  6
  PPFIA2 WILD-TYPE 10  9
[1] "tbl2"
                  cls
clus               [,1] [,2]
  PPFIA2 MUTATED      6    6
  PPFIA2 WILD-TYPE   10    9
        clus
vv       PPFIA2 MUTATED PPFIA2 WILD-TYPE
  CLUS_1              6               10
  CLUS_2              6                9
D51V2, binary
                  cls
clus                0  1
  PPFIA2 MUTATED    6  6
  PPFIA2 WILD-TYPE  8 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  PPFIA2 MUTATED      6    6
  PPFIA2 WILD-TYPE    8   11
        clus
vv       PPFIA2 MUTATED PPFIA2 WILD-TYPE
  CLUS_1              6                8
  CLUS_2              6               11
D51V3, binary
                  cls
clus               0 1
  PPFIA2 MUTATED   3 7
  PPFIA2 WILD-TYPE 4 9
[1] "tbl2"
                  cls
clus               [,1] [,2]
  PPFIA2 MUTATED      3    7
  PPFIA2 WILD-TYPE    4    9
        clus
vv       PPFIA2 MUTATED PPFIA2 WILD-TYPE
  CLUS_1              3                4
  CLUS_2              7                9
D51V4, binary
                  cls
clus                0  1
  PPFIA2 MUTATED    2  8
  PPFIA2 WILD-TYPE  2 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  PPFIA2 MUTATED      2    8
  PPFIA2 WILD-TYPE    2   11
        clus
vv       PPFIA2 MUTATED PPFIA2 WILD-TYPE
  CLUS_1              2                2
  CLUS_2              8               11
D51V5, multiclass
        clus
vv       PPFIA2 MUTATED PPFIA2 WILD-TYPE
  CLUS_1              3                5
  CLUS_2              5                6
  CLUS_3              4                8
D51V6, multiclass
        clus
vv       PPFIA2 MUTATED PPFIA2 WILD-TYPE
  CLUS_1              3                3
  CLUS_2              3                5
  CLUS_3              2                5
  CLUS_4              4                6
D51V7, binary
                  cls
clus                0  1
  PPFIA2 MUTATED    7  5
  PPFIA2 WILD-TYPE  9 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  PPFIA2 MUTATED      7    5
  PPFIA2 WILD-TYPE    9   10
        clus
vv       PPFIA2 MUTATED PPFIA2 WILD-TYPE
  CLUS_1              7                9
  CLUS_2              5               10
D51V8, multiclass

Clustering(52) Variable = IL1F8 MUTATION ANALYSIS
D52V1, binary
                 cls
clus               0  1
  IL1F8 MUTATED    3  3
  IL1F8 WILD-TYPE 13 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  IL1F8 MUTATED      3    3
  IL1F8 WILD-TYPE   13   12
        clus
vv       IL1F8 MUTATED IL1F8 WILD-TYPE
  CLUS_1             3              13
  CLUS_2             3              12
D52V2, binary
                 cls
clus               0  1
  IL1F8 MUTATED    5  1
  IL1F8 WILD-TYPE  9 16
[1] "tbl2"
                 cls
clus              [,1] [,2]
  IL1F8 MUTATED      5    1
  IL1F8 WILD-TYPE    9   16
        clus
vv       IL1F8 MUTATED IL1F8 WILD-TYPE
  CLUS_1             5               9
  CLUS_2             1              16
D52V3, binary
                 cls
clus               0  1
  IL1F8 MUTATED    1  2
  IL1F8 WILD-TYPE  6 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  IL1F8 MUTATED      1    2
  IL1F8 WILD-TYPE    6   14
        clus
vv       IL1F8 MUTATED IL1F8 WILD-TYPE
  CLUS_1             1               6
  CLUS_2             2              14
D52V4, binary
                 cls
clus               0  1
  IL1F8 MUTATED    1  2
  IL1F8 WILD-TYPE  3 17
[1] "tbl2"
                 cls
clus              [,1] [,2]
  IL1F8 MUTATED      1    2
  IL1F8 WILD-TYPE    3   17
        clus
vv       IL1F8 MUTATED IL1F8 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             2              17
D52V5, multiclass
        clus
vv       IL1F8 MUTATED IL1F8 WILD-TYPE
  CLUS_1             2               6
  CLUS_2             2               9
  CLUS_3             2              10
D52V6, multiclass
        clus
vv       IL1F8 MUTATED IL1F8 WILD-TYPE
  CLUS_1             3               3
  CLUS_2             0               8
  CLUS_3             2               5
  CLUS_4             1               9
D52V7, binary
                 cls
clus               0  1
  IL1F8 MUTATED    6  0
  IL1F8 WILD-TYPE 10 15
[1] "tbl2"
                 cls
clus              [,1] [,2]
  IL1F8 MUTATED      6    0
  IL1F8 WILD-TYPE   10   15
        clus
vv       IL1F8 MUTATED IL1F8 WILD-TYPE
  CLUS_1             6              10
  CLUS_2             0              15
D52V8, multiclass

Clustering(53) Variable = UGT2A1 MUTATION ANALYSIS
D53V1, binary
                  cls
clus                0  1
  UGT2A1 MUTATED    4  3
  UGT2A1 WILD-TYPE 12 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  UGT2A1 MUTATED      4    3
  UGT2A1 WILD-TYPE   12   12
        clus
vv       UGT2A1 MUTATED UGT2A1 WILD-TYPE
  CLUS_1              4               12
  CLUS_2              3               12
D53V2, binary
                  cls
clus                0  1
  UGT2A1 MUTATED    2  5
  UGT2A1 WILD-TYPE 12 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  UGT2A1 MUTATED      2    5
  UGT2A1 WILD-TYPE   12   12
        clus
vv       UGT2A1 MUTATED UGT2A1 WILD-TYPE
  CLUS_1              2               12
  CLUS_2              5               12
D53V3, binary
                  cls
clus                0  1
  UGT2A1 MUTATED    0  4
  UGT2A1 WILD-TYPE  7 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  UGT2A1 MUTATED      0    4
  UGT2A1 WILD-TYPE    7   12
        clus
vv       UGT2A1 MUTATED UGT2A1 WILD-TYPE
  CLUS_1              0                7
  CLUS_2              4               12
D53V4, binary
                  cls
clus                0  1
  UGT2A1 MUTATED    0  4
  UGT2A1 WILD-TYPE  4 15
[1] "tbl2"
                  cls
clus               [,1] [,2]
  UGT2A1 MUTATED      0    4
  UGT2A1 WILD-TYPE    4   15
        clus
vv       UGT2A1 MUTATED UGT2A1 WILD-TYPE
  CLUS_1              0                4
  CLUS_2              4               15
D53V5, multiclass
        clus
vv       UGT2A1 MUTATED UGT2A1 WILD-TYPE
  CLUS_1              2                6
  CLUS_2              2                9
  CLUS_3              3                9
D53V6, multiclass
        clus
vv       UGT2A1 MUTATED UGT2A1 WILD-TYPE
  CLUS_1              1                5
  CLUS_2              1                7
  CLUS_3              1                6
  CLUS_4              4                6
D53V7, binary
                  cls
clus                0  1
  UGT2A1 MUTATED    4  3
  UGT2A1 WILD-TYPE 12 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  UGT2A1 MUTATED      4    3
  UGT2A1 WILD-TYPE   12   12
        clus
vv       UGT2A1 MUTATED UGT2A1 WILD-TYPE
  CLUS_1              4               12
  CLUS_2              3               12
D53V8, multiclass

Clustering(54) Variable = SYT13 MUTATION ANALYSIS
D54V1, binary
                 cls
clus               0  1
  SYT13 MUTATED    2  2
  SYT13 WILD-TYPE 14 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SYT13 MUTATED      2    2
  SYT13 WILD-TYPE   14   13
        clus
vv       SYT13 MUTATED SYT13 WILD-TYPE
  CLUS_1             2              14
  CLUS_2             2              13
D54V2, binary
                 cls
clus               0  1
  SYT13 MUTATED    2  2
  SYT13 WILD-TYPE 12 15
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SYT13 MUTATED      2    2
  SYT13 WILD-TYPE   12   15
        clus
vv       SYT13 MUTATED SYT13 WILD-TYPE
  CLUS_1             2              12
  CLUS_2             2              15
D54V3, binary
                 cls
clus               0  1
  SYT13 MUTATED    0  3
  SYT13 WILD-TYPE  7 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SYT13 MUTATED      0    3
  SYT13 WILD-TYPE    7   13
        clus
vv       SYT13 MUTATED SYT13 WILD-TYPE
  CLUS_1             0               7
  CLUS_2             3              13
D54V4, binary
                 cls
clus               0  1
  SYT13 MUTATED    0  3
  SYT13 WILD-TYPE  4 16
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SYT13 MUTATED      0    3
  SYT13 WILD-TYPE    4   16
        clus
vv       SYT13 MUTATED SYT13 WILD-TYPE
  CLUS_1             0               4
  CLUS_2             3              16
D54V5, multiclass
        clus
vv       SYT13 MUTATED SYT13 WILD-TYPE
  CLUS_1             3               5
  CLUS_2             1              10
  CLUS_3             0              12
D54V6, multiclass
        clus
vv       SYT13 MUTATED SYT13 WILD-TYPE
  CLUS_1             1               5
  CLUS_2             0               8
  CLUS_3             0               7
  CLUS_4             3               7
D54V7, binary
                 cls
clus               0  1
  SYT13 MUTATED    3  1
  SYT13 WILD-TYPE 13 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SYT13 MUTATED      3    1
  SYT13 WILD-TYPE   13   14
        clus
vv       SYT13 MUTATED SYT13 WILD-TYPE
  CLUS_1             3              13
  CLUS_2             1              14
D54V8, multiclass

Clustering(55) Variable = ASAH2 MUTATION ANALYSIS
D55V1, binary
                 cls
clus               0  1
  ASAH2 MUTATED    1  5
  ASAH2 WILD-TYPE 15 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  ASAH2 MUTATED      1    5
  ASAH2 WILD-TYPE   15   10
        clus
vv       ASAH2 MUTATED ASAH2 WILD-TYPE
  CLUS_1             1              15
  CLUS_2             5              10
D55V2, binary
                 cls
clus               0  1
  ASAH2 MUTATED    3  3
  ASAH2 WILD-TYPE 11 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  ASAH2 MUTATED      3    3
  ASAH2 WILD-TYPE   11   14
        clus
vv       ASAH2 MUTATED ASAH2 WILD-TYPE
  CLUS_1             3              11
  CLUS_2             3              14
D55V3, binary
                 cls
clus               0  1
  ASAH2 MUTATED    2  4
  ASAH2 WILD-TYPE  5 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  ASAH2 MUTATED      2    4
  ASAH2 WILD-TYPE    5   12
        clus
vv       ASAH2 MUTATED ASAH2 WILD-TYPE
  CLUS_1             2               5
  CLUS_2             4              12
D55V4, binary
                 cls
clus               0  1
  ASAH2 MUTATED    1  5
  ASAH2 WILD-TYPE  3 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  ASAH2 MUTATED      1    5
  ASAH2 WILD-TYPE    3   14
        clus
vv       ASAH2 MUTATED ASAH2 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             5              14
D55V5, multiclass
        clus
vv       ASAH2 MUTATED ASAH2 WILD-TYPE
  CLUS_1             1               7
  CLUS_2             1              10
  CLUS_3             4               8
D55V6, multiclass
        clus
vv       ASAH2 MUTATED ASAH2 WILD-TYPE
  CLUS_1             1               5
  CLUS_2             1               7
  CLUS_3             1               6
  CLUS_4             3               7
D55V7, binary
                 cls
clus               0  1
  ASAH2 MUTATED    1  5
  ASAH2 WILD-TYPE 15 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  ASAH2 MUTATED      1    5
  ASAH2 WILD-TYPE   15   10
        clus
vv       ASAH2 MUTATED ASAH2 WILD-TYPE
  CLUS_1             1              15
  CLUS_2             5              10
D55V8, multiclass

Clustering(56) Variable = ZNF679 MUTATION ANALYSIS
D56V1, binary
                  cls
clus                0  1
  ZNF679 MUTATED    2  5
  ZNF679 WILD-TYPE 14 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ZNF679 MUTATED      2    5
  ZNF679 WILD-TYPE   14   10
        clus
vv       ZNF679 MUTATED ZNF679 WILD-TYPE
  CLUS_1              2               14
  CLUS_2              5               10
D56V2, binary
                  cls
clus                0  1
  ZNF679 MUTATED    3  4
  ZNF679 WILD-TYPE 11 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ZNF679 MUTATED      3    4
  ZNF679 WILD-TYPE   11   13
        clus
vv       ZNF679 MUTATED ZNF679 WILD-TYPE
  CLUS_1              3               11
  CLUS_2              4               13
D56V3, binary
                  cls
clus                0  1
  ZNF679 MUTATED    2  5
  ZNF679 WILD-TYPE  5 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ZNF679 MUTATED      2    5
  ZNF679 WILD-TYPE    5   11
        clus
vv       ZNF679 MUTATED ZNF679 WILD-TYPE
  CLUS_1              2                5
  CLUS_2              5               11
D56V4, binary
                  cls
clus                0  1
  ZNF679 MUTATED    1  6
  ZNF679 WILD-TYPE  3 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ZNF679 MUTATED      1    6
  ZNF679 WILD-TYPE    3   13
        clus
vv       ZNF679 MUTATED ZNF679 WILD-TYPE
  CLUS_1              1                3
  CLUS_2              6               13
D56V5, multiclass
        clus
vv       ZNF679 MUTATED ZNF679 WILD-TYPE
  CLUS_1              1                7
  CLUS_2              2                9
  CLUS_3              4                8
D56V6, multiclass
        clus
vv       ZNF679 MUTATED ZNF679 WILD-TYPE
  CLUS_1              1                5
  CLUS_2              1                7
  CLUS_3              1                6
  CLUS_4              4                6
D56V7, binary
                  cls
clus                0  1
  ZNF679 MUTATED    2  5
  ZNF679 WILD-TYPE 14 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  ZNF679 MUTATED      2    5
  ZNF679 WILD-TYPE   14   10
        clus
vv       ZNF679 MUTATED ZNF679 WILD-TYPE
  CLUS_1              2               14
  CLUS_2              5               10
D56V8, multiclass

Clustering(57) Variable = C10ORF54 MUTATION ANALYSIS
D57V1, binary
                    cls
clus                  0  1
  C10ORF54 MUTATED    5  1
  C10ORF54 WILD-TYPE 11 14
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C10ORF54 MUTATED      5    1
  C10ORF54 WILD-TYPE   11   14
        clus
vv       C10ORF54 MUTATED C10ORF54 WILD-TYPE
  CLUS_1                5                 11
  CLUS_2                1                 14
D57V2, binary
                    cls
clus                  0  1
  C10ORF54 MUTATED    2  4
  C10ORF54 WILD-TYPE 12 13
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C10ORF54 MUTATED      2    4
  C10ORF54 WILD-TYPE   12   13
        clus
vv       C10ORF54 MUTATED C10ORF54 WILD-TYPE
  CLUS_1                2                 12
  CLUS_2                4                 13
D57V3, binary
                    cls
clus                  0  1
  C10ORF54 MUTATED    1  3
  C10ORF54 WILD-TYPE  6 13
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C10ORF54 MUTATED      1    3
  C10ORF54 WILD-TYPE    6   13
        clus
vv       C10ORF54 MUTATED C10ORF54 WILD-TYPE
  CLUS_1                1                  6
  CLUS_2                3                 13
D57V4, binary
                    cls
clus                  0  1
  C10ORF54 MUTATED    1  3
  C10ORF54 WILD-TYPE  3 16
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C10ORF54 MUTATED      1    3
  C10ORF54 WILD-TYPE    3   16
        clus
vv       C10ORF54 MUTATED C10ORF54 WILD-TYPE
  CLUS_1                1                  3
  CLUS_2                3                 16
D57V5, multiclass
        clus
vv       C10ORF54 MUTATED C10ORF54 WILD-TYPE
  CLUS_1                0                  8
  CLUS_2                4                  7
  CLUS_3                2                 10
D57V6, multiclass
        clus
vv       C10ORF54 MUTATED C10ORF54 WILD-TYPE
  CLUS_1                1                  5
  CLUS_2                3                  5
  CLUS_3                2                  5
  CLUS_4                0                 10
D57V7, binary
                    cls
clus                  0  1
  C10ORF54 MUTATED    3  3
  C10ORF54 WILD-TYPE 13 12
[1] "tbl2"
                    cls
clus                 [,1] [,2]
  C10ORF54 MUTATED      3    3
  C10ORF54 WILD-TYPE   13   12
        clus
vv       C10ORF54 MUTATED C10ORF54 WILD-TYPE
  CLUS_1                3                 13
  CLUS_2                3                 12
D57V8, multiclass

Clustering(58) Variable = C10ORF120 MUTATION ANALYSIS
D58V1, binary
                     cls
clus                   0  1
  C10ORF120 MUTATED    5  2
  C10ORF120 WILD-TYPE 11 13
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  C10ORF120 MUTATED      5    2
  C10ORF120 WILD-TYPE   11   13
        clus
vv       C10ORF120 MUTATED C10ORF120 WILD-TYPE
  CLUS_1                 5                  11
  CLUS_2                 2                  13
D58V2, binary
                     cls
clus                   0  1
  C10ORF120 MUTATED    4  3
  C10ORF120 WILD-TYPE 10 14
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  C10ORF120 MUTATED      4    3
  C10ORF120 WILD-TYPE   10   14
        clus
vv       C10ORF120 MUTATED C10ORF120 WILD-TYPE
  CLUS_1                 4                  10
  CLUS_2                 3                  14
D58V3, binary
                     cls
clus                   0  1
  C10ORF120 MUTATED    1  5
  C10ORF120 WILD-TYPE  6 11
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  C10ORF120 MUTATED      1    5
  C10ORF120 WILD-TYPE    6   11
        clus
vv       C10ORF120 MUTATED C10ORF120 WILD-TYPE
  CLUS_1                 1                   6
  CLUS_2                 5                  11
D58V4, binary
                     cls
clus                   0  1
  C10ORF120 MUTATED    1  5
  C10ORF120 WILD-TYPE  3 14
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  C10ORF120 MUTATED      1    5
  C10ORF120 WILD-TYPE    3   14
        clus
vv       C10ORF120 MUTATED C10ORF120 WILD-TYPE
  CLUS_1                 1                   3
  CLUS_2                 5                  14
D58V5, multiclass
        clus
vv       C10ORF120 MUTATED C10ORF120 WILD-TYPE
  CLUS_1                 1                   7
  CLUS_2                 5                   6
  CLUS_3                 1                  11
D58V6, multiclass
        clus
vv       C10ORF120 MUTATED C10ORF120 WILD-TYPE
  CLUS_1                 0                   6
  CLUS_2                 5                   3
  CLUS_3                 1                   6
  CLUS_4                 1                   9
D58V7, binary
                     cls
clus                   0  1
  C10ORF120 MUTATED    2  5
  C10ORF120 WILD-TYPE 14 10
[1] "tbl2"
                     cls
clus                  [,1] [,2]
  C10ORF120 MUTATED      2    5
  C10ORF120 WILD-TYPE   14   10
        clus
vv       C10ORF120 MUTATED C10ORF120 WILD-TYPE
  CLUS_1                 2                  14
  CLUS_2                 5                  10
D58V8, multiclass

Clustering(59) Variable = CHSY1 MUTATION ANALYSIS
D59V1, binary
                 cls
clus               0  1
  CHSY1 MUTATED    1  4
  CHSY1 WILD-TYPE 15 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CHSY1 MUTATED      1    4
  CHSY1 WILD-TYPE   15   11
        clus
vv       CHSY1 MUTATED CHSY1 WILD-TYPE
  CLUS_1             1              15
  CLUS_2             4              11
D59V2, binary
                 cls
clus               0  1
  CHSY1 MUTATED    2  3
  CHSY1 WILD-TYPE 12 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CHSY1 MUTATED      2    3
  CHSY1 WILD-TYPE   12   14
        clus
vv       CHSY1 MUTATED CHSY1 WILD-TYPE
  CLUS_1             2              12
  CLUS_2             3              14
D59V3, binary
                 cls
clus               0  1
  CHSY1 MUTATED    1  3
  CHSY1 WILD-TYPE  6 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CHSY1 MUTATED      1    3
  CHSY1 WILD-TYPE    6   13
        clus
vv       CHSY1 MUTATED CHSY1 WILD-TYPE
  CLUS_1             1               6
  CLUS_2             3              13
D59V4, binary
                 cls
clus               0  1
  CHSY1 MUTATED    1  3
  CHSY1 WILD-TYPE  3 16
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CHSY1 MUTATED      1    3
  CHSY1 WILD-TYPE    3   16
        clus
vv       CHSY1 MUTATED CHSY1 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             3              16
D59V5, multiclass
        clus
vv       CHSY1 MUTATED CHSY1 WILD-TYPE
  CLUS_1             0               8
  CLUS_2             1              10
  CLUS_3             4               8
D59V6, multiclass
        clus
vv       CHSY1 MUTATED CHSY1 WILD-TYPE
  CLUS_1             0               6
  CLUS_2             1               7
  CLUS_3             1               6
  CLUS_4             3               7
D59V7, binary
                 cls
clus               0  1
  CHSY1 MUTATED    1  4
  CHSY1 WILD-TYPE 15 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CHSY1 MUTATED      1    4
  CHSY1 WILD-TYPE   15   11
        clus
vv       CHSY1 MUTATED CHSY1 WILD-TYPE
  CLUS_1             1              15
  CLUS_2             4              11
D59V8, multiclass

Clustering(60) Variable = CSF2RA MUTATION ANALYSIS
D60V1, binary
                  cls
clus                0  1
  CSF2RA MUTATED    2  4
  CSF2RA WILD-TYPE 14 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CSF2RA MUTATED      2    4
  CSF2RA WILD-TYPE   14   11
        clus
vv       CSF2RA MUTATED CSF2RA WILD-TYPE
  CLUS_1              2               14
  CLUS_2              4               11
D60V2, binary
                  cls
clus                0  1
  CSF2RA MUTATED    2  4
  CSF2RA WILD-TYPE 12 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CSF2RA MUTATED      2    4
  CSF2RA WILD-TYPE   12   13
        clus
vv       CSF2RA MUTATED CSF2RA WILD-TYPE
  CLUS_1              2               12
  CLUS_2              4               13
D60V3, binary
                  cls
clus                0  1
  CSF2RA MUTATED    3  2
  CSF2RA WILD-TYPE  4 14
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CSF2RA MUTATED      3    2
  CSF2RA WILD-TYPE    4   14
        clus
vv       CSF2RA MUTATED CSF2RA WILD-TYPE
  CLUS_1              3                4
  CLUS_2              2               14
D60V4, binary
                  cls
clus                0  1
  CSF2RA MUTATED    2  3
  CSF2RA WILD-TYPE  2 16
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CSF2RA MUTATED      2    3
  CSF2RA WILD-TYPE    2   16
        clus
vv       CSF2RA MUTATED CSF2RA WILD-TYPE
  CLUS_1              2                2
  CLUS_2              3               16
D60V5, multiclass
        clus
vv       CSF2RA MUTATED CSF2RA WILD-TYPE
  CLUS_1              1                7
  CLUS_2              2                9
  CLUS_3              3                9
D60V6, multiclass
        clus
vv       CSF2RA MUTATED CSF2RA WILD-TYPE
  CLUS_1              2                4
  CLUS_2              1                7
  CLUS_3              2                5
  CLUS_4              1                9
D60V7, binary
                  cls
clus                0  1
  CSF2RA MUTATED    3  3
  CSF2RA WILD-TYPE 13 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CSF2RA MUTATED      3    3
  CSF2RA WILD-TYPE   13   12
        clus
vv       CSF2RA MUTATED CSF2RA WILD-TYPE
  CLUS_1              3               13
  CLUS_2              3               12
D60V8, multiclass

Clustering(61) Variable = KCND2 MUTATION ANALYSIS
D61V1, binary
                 cls
clus               0  1
  KCND2 MUTATED    5  5
  KCND2 WILD-TYPE 11 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  KCND2 MUTATED      5    5
  KCND2 WILD-TYPE   11   10
        clus
vv       KCND2 MUTATED KCND2 WILD-TYPE
  CLUS_1             5              11
  CLUS_2             5              10
D61V2, binary
                 cls
clus               0  1
  KCND2 MUTATED    5  5
  KCND2 WILD-TYPE  9 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  KCND2 MUTATED      5    5
  KCND2 WILD-TYPE    9   12
        clus
vv       KCND2 MUTATED KCND2 WILD-TYPE
  CLUS_1             5               9
  CLUS_2             5              12
D61V3, binary
                 cls
clus               0  1
  KCND2 MUTATED    1  6
  KCND2 WILD-TYPE  6 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  KCND2 MUTATED      1    6
  KCND2 WILD-TYPE    6   10
        clus
vv       KCND2 MUTATED KCND2 WILD-TYPE
  CLUS_1             1               6
  CLUS_2             6              10
D61V4, binary
                 cls
clus               0  1
  KCND2 MUTATED    1  6
  KCND2 WILD-TYPE  3 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  KCND2 MUTATED      1    6
  KCND2 WILD-TYPE    3   13
        clus
vv       KCND2 MUTATED KCND2 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             6              13
D61V5, multiclass
        clus
vv       KCND2 MUTATED KCND2 WILD-TYPE
  CLUS_1             3               5
  CLUS_2             5               6
  CLUS_3             2              10
D61V6, multiclass
        clus
vv       KCND2 MUTATED KCND2 WILD-TYPE
  CLUS_1             3               3
  CLUS_2             3               5
  CLUS_3             1               6
  CLUS_4             3               7
D61V7, binary
                 cls
clus               0  1
  KCND2 MUTATED    6  4
  KCND2 WILD-TYPE 10 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  KCND2 MUTATED      6    4
  KCND2 WILD-TYPE   10   11
        clus
vv       KCND2 MUTATED KCND2 WILD-TYPE
  CLUS_1             6              10
  CLUS_2             4              11
D61V8, multiclass

Clustering(62) Variable = SPEF2 MUTATION ANALYSIS
D62V1, binary
                 cls
clus               0  1
  SPEF2 MUTATED    8  4
  SPEF2 WILD-TYPE  8 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SPEF2 MUTATED      8    4
  SPEF2 WILD-TYPE    8   11
        clus
vv       SPEF2 MUTATED SPEF2 WILD-TYPE
  CLUS_1             8               8
  CLUS_2             4              11
D62V2, binary
                 cls
clus               0  1
  SPEF2 MUTATED    5  7
  SPEF2 WILD-TYPE  9 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SPEF2 MUTATED      5    7
  SPEF2 WILD-TYPE    9   10
        clus
vv       SPEF2 MUTATED SPEF2 WILD-TYPE
  CLUS_1             5               9
  CLUS_2             7              10
D62V3, binary
                 cls
clus               0  1
  SPEF2 MUTATED    3  6
  SPEF2 WILD-TYPE  4 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SPEF2 MUTATED      3    6
  SPEF2 WILD-TYPE    4   10
        clus
vv       SPEF2 MUTATED SPEF2 WILD-TYPE
  CLUS_1             3               4
  CLUS_2             6              10
D62V4, binary
                 cls
clus               0  1
  SPEF2 MUTATED    1  8
  SPEF2 WILD-TYPE  3 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SPEF2 MUTATED      1    8
  SPEF2 WILD-TYPE    3   11
        clus
vv       SPEF2 MUTATED SPEF2 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             8              11
D62V5, multiclass
        clus
vv       SPEF2 MUTATED SPEF2 WILD-TYPE
  CLUS_1             1               7
  CLUS_2             7               4
  CLUS_3             4               8
D62V6, multiclass
        clus
vv       SPEF2 MUTATED SPEF2 WILD-TYPE
  CLUS_1             3               3
  CLUS_2             4               4
  CLUS_3             2               5
  CLUS_4             3               7
D62V7, binary
                 cls
clus               0  1
  SPEF2 MUTATED    7  5
  SPEF2 WILD-TYPE  9 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  SPEF2 MUTATED      7    5
  SPEF2 WILD-TYPE    9   10
        clus
vv       SPEF2 MUTATED SPEF2 WILD-TYPE
  CLUS_1             7               9
  CLUS_2             5              10
D62V8, multiclass

Clustering(63) Variable = RPGRIP1 MUTATION ANALYSIS
D63V1, binary
                   cls
clus                 0  1
  RPGRIP1 MUTATED    4  4
  RPGRIP1 WILD-TYPE 12 11
[1] "tbl2"
                   cls
clus                [,1] [,2]
  RPGRIP1 MUTATED      4    4
  RPGRIP1 WILD-TYPE   12   11
        clus
vv       RPGRIP1 MUTATED RPGRIP1 WILD-TYPE
  CLUS_1               4                12
  CLUS_2               4                11
D63V2, binary
                   cls
clus                 0  1
  RPGRIP1 MUTATED    5  3
  RPGRIP1 WILD-TYPE  9 14
[1] "tbl2"
                   cls
clus                [,1] [,2]
  RPGRIP1 MUTATED      5    3
  RPGRIP1 WILD-TYPE    9   14
        clus
vv       RPGRIP1 MUTATED RPGRIP1 WILD-TYPE
  CLUS_1               5                 9
  CLUS_2               3                14
D63V3, binary
                   cls
clus                 0  1
  RPGRIP1 MUTATED    1  5
  RPGRIP1 WILD-TYPE  6 11
[1] "tbl2"
                   cls
clus                [,1] [,2]
  RPGRIP1 MUTATED      1    5
  RPGRIP1 WILD-TYPE    6   11
        clus
vv       RPGRIP1 MUTATED RPGRIP1 WILD-TYPE
  CLUS_1               1                 6
  CLUS_2               5                11
D63V4, binary
                   cls
clus                 0  1
  RPGRIP1 MUTATED    1  5
  RPGRIP1 WILD-TYPE  3 14
[1] "tbl2"
                   cls
clus                [,1] [,2]
  RPGRIP1 MUTATED      1    5
  RPGRIP1 WILD-TYPE    3   14
        clus
vv       RPGRIP1 MUTATED RPGRIP1 WILD-TYPE
  CLUS_1               1                 3
  CLUS_2               5                14
D63V5, multiclass
        clus
vv       RPGRIP1 MUTATED RPGRIP1 WILD-TYPE
  CLUS_1               2                 6
  CLUS_2               4                 7
  CLUS_3               2                10
D63V6, multiclass
        clus
vv       RPGRIP1 MUTATED RPGRIP1 WILD-TYPE
  CLUS_1               2                 4
  CLUS_2               3                 5
  CLUS_3               1                 6
  CLUS_4               2                 8
D63V7, binary
                   cls
clus                 0  1
  RPGRIP1 MUTATED    3  5
  RPGRIP1 WILD-TYPE 13 10
[1] "tbl2"
                   cls
clus                [,1] [,2]
  RPGRIP1 MUTATED      3    5
  RPGRIP1 WILD-TYPE   13   10
        clus
vv       RPGRIP1 MUTATED RPGRIP1 WILD-TYPE
  CLUS_1               3                13
  CLUS_2               5                10
D63V8, multiclass

Clustering(64) Variable = OR2L3 MUTATION ANALYSIS
D64V1, binary
                 cls
clus               0  1
  OR2L3 MUTATED    3  1
  OR2L3 WILD-TYPE 13 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR2L3 MUTATED      3    1
  OR2L3 WILD-TYPE   13   14
        clus
vv       OR2L3 MUTATED OR2L3 WILD-TYPE
  CLUS_1             3              13
  CLUS_2             1              14
D64V2, binary
                 cls
clus               0  1
  OR2L3 MUTATED    3  1
  OR2L3 WILD-TYPE 11 16
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR2L3 MUTATED      3    1
  OR2L3 WILD-TYPE   11   16
        clus
vv       OR2L3 MUTATED OR2L3 WILD-TYPE
  CLUS_1             3              11
  CLUS_2             1              16
D64V3, binary
                 cls
clus               0  1
  OR2L3 MUTATED    1  1
  OR2L3 WILD-TYPE  6 15
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR2L3 MUTATED      1    1
  OR2L3 WILD-TYPE    6   15
        clus
vv       OR2L3 MUTATED OR2L3 WILD-TYPE
  CLUS_1             1               6
  CLUS_2             1              15
D64V4, binary
                 cls
clus               0  1
  OR2L3 MUTATED    0  2
  OR2L3 WILD-TYPE  4 17
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR2L3 MUTATED      0    2
  OR2L3 WILD-TYPE    4   17
        clus
vv       OR2L3 MUTATED OR2L3 WILD-TYPE
  CLUS_1             0               4
  CLUS_2             2              17
D64V5, multiclass
        clus
vv       OR2L3 MUTATED OR2L3 WILD-TYPE
  CLUS_1             0               8
  CLUS_2             2               9
  CLUS_3             2              10
D64V6, multiclass
        clus
vv       OR2L3 MUTATED OR2L3 WILD-TYPE
  CLUS_1             0               6
  CLUS_2             2               6
  CLUS_3             1               6
  CLUS_4             1               9
D64V7, binary
                 cls
clus               0  1
  OR2L3 MUTATED    2  2
  OR2L3 WILD-TYPE 14 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  OR2L3 MUTATED      2    2
  OR2L3 WILD-TYPE   14   13
        clus
vv       OR2L3 MUTATED OR2L3 WILD-TYPE
  CLUS_1             2              14
  CLUS_2             2              13
D64V8, multiclass

Clustering(65) Variable = CCDC54 MUTATION ANALYSIS
D65V1, binary
                  cls
clus                0  1
  CCDC54 MUTATED    5  1
  CCDC54 WILD-TYPE 11 14
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CCDC54 MUTATED      5    1
  CCDC54 WILD-TYPE   11   14
        clus
vv       CCDC54 MUTATED CCDC54 WILD-TYPE
  CLUS_1              5               11
  CLUS_2              1               14
D65V2, binary
                  cls
clus                0  1
  CCDC54 MUTATED    2  4
  CCDC54 WILD-TYPE 12 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CCDC54 MUTATED      2    4
  CCDC54 WILD-TYPE   12   13
        clus
vv       CCDC54 MUTATED CCDC54 WILD-TYPE
  CLUS_1              2               12
  CLUS_2              4               13
D65V3, binary
                  cls
clus                0  1
  CCDC54 MUTATED    1  5
  CCDC54 WILD-TYPE  6 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CCDC54 MUTATED      1    5
  CCDC54 WILD-TYPE    6   11
        clus
vv       CCDC54 MUTATED CCDC54 WILD-TYPE
  CLUS_1              1                6
  CLUS_2              5               11
D65V4, binary
                  cls
clus                0  1
  CCDC54 MUTATED    0  6
  CCDC54 WILD-TYPE  4 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CCDC54 MUTATED      0    6
  CCDC54 WILD-TYPE    4   13
        clus
vv       CCDC54 MUTATED CCDC54 WILD-TYPE
  CLUS_1              0                4
  CLUS_2              6               13
D65V5, multiclass
        clus
vv       CCDC54 MUTATED CCDC54 WILD-TYPE
  CLUS_1              1                7
  CLUS_2              4                7
  CLUS_3              1               11
D65V6, multiclass
        clus
vv       CCDC54 MUTATED CCDC54 WILD-TYPE
  CLUS_1              1                5
  CLUS_2              3                5
  CLUS_3              0                7
  CLUS_4              2                8
D65V7, binary
                  cls
clus                0  1
  CCDC54 MUTATED    3  3
  CCDC54 WILD-TYPE 13 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  CCDC54 MUTATED      3    3
  CCDC54 WILD-TYPE   13   12
        clus
vv       CCDC54 MUTATED CCDC54 WILD-TYPE
  CLUS_1              3               13
  CLUS_2              3               12
D65V8, multiclass

Clustering(66) Variable = KLHL14 MUTATION ANALYSIS
D66V1, binary
                  cls
clus                0  1
  KLHL14 MUTATED    5  2
  KLHL14 WILD-TYPE 11 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  KLHL14 MUTATED      5    2
  KLHL14 WILD-TYPE   11   13
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              5               11
  CLUS_2              2               13
D66V2, binary
                  cls
clus                0  1
  KLHL14 MUTATED    3  4
  KLHL14 WILD-TYPE 11 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  KLHL14 MUTATED      3    4
  KLHL14 WILD-TYPE   11   13
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              3               11
  CLUS_2              4               13
D66V3, binary
                  cls
clus                0  1
  KLHL14 MUTATED    2  4
  KLHL14 WILD-TYPE  5 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  KLHL14 MUTATED      2    4
  KLHL14 WILD-TYPE    5   12
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              2                5
  CLUS_2              4               12
D66V4, binary
                  cls
clus                0  1
  KLHL14 MUTATED    2  4
  KLHL14 WILD-TYPE  2 15
[1] "tbl2"
                  cls
clus               [,1] [,2]
  KLHL14 MUTATED      2    4
  KLHL14 WILD-TYPE    2   15
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              2                2
  CLUS_2              4               15
D66V5, multiclass
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              1                7
  CLUS_2              4                7
  CLUS_3              2               10
D66V6, multiclass
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              1                5
  CLUS_2              3                5
  CLUS_3              2                5
  CLUS_4              1                9
D66V7, binary
                  cls
clus                0  1
  KLHL14 MUTATED    4  3
  KLHL14 WILD-TYPE 12 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  KLHL14 MUTATED      4    3
  KLHL14 WILD-TYPE   12   12
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              4               12
  CLUS_2              3               12
D66V8, multiclass

Clustering(67) Variable = ZFX MUTATION ANALYSIS
D67V1, binary
               cls
clus             0  1
  ZFX MUTATED    4  3
  ZFX WILD-TYPE 12 12
[1] "tbl2"
               cls
clus            [,1] [,2]
  ZFX MUTATED      4    3
  ZFX WILD-TYPE   12   12
        clus
vv       ZFX MUTATED ZFX WILD-TYPE
  CLUS_1           4            12
  CLUS_2           3            12
D67V2, binary
               cls
clus             0  1
  ZFX MUTATED    3  4
  ZFX WILD-TYPE 11 13
[1] "tbl2"
               cls
clus            [,1] [,2]
  ZFX MUTATED      3    4
  ZFX WILD-TYPE   11   13
        clus
vv       ZFX MUTATED ZFX WILD-TYPE
  CLUS_1           3            11
  CLUS_2           4            13
D67V3, binary
               cls
clus             0  1
  ZFX MUTATED    1  3
  ZFX WILD-TYPE  6 13
[1] "tbl2"
               cls
clus            [,1] [,2]
  ZFX MUTATED      1    3
  ZFX WILD-TYPE    6   13
        clus
vv       ZFX MUTATED ZFX WILD-TYPE
  CLUS_1           1             6
  CLUS_2           3            13
D67V4, binary
               cls
clus             0  1
  ZFX MUTATED    0  4
  ZFX WILD-TYPE  4 15
[1] "tbl2"
               cls
clus            [,1] [,2]
  ZFX MUTATED      0    4
  ZFX WILD-TYPE    4   15
        clus
vv       ZFX MUTATED ZFX WILD-TYPE
  CLUS_1           0             4
  CLUS_2           4            15
D67V5, multiclass
        clus
vv       ZFX MUTATED ZFX WILD-TYPE
  CLUS_1           1             7
  CLUS_2           3             8
  CLUS_3           3             9
D67V6, multiclass
        clus
vv       ZFX MUTATED ZFX WILD-TYPE
  CLUS_1           1             5
  CLUS_2           2             6
  CLUS_3           1             6
  CLUS_4           3             7
D67V7, binary
               cls
clus             0  1
  ZFX MUTATED    3  4
  ZFX WILD-TYPE 13 11
[1] "tbl2"
               cls
clus            [,1] [,2]
  ZFX MUTATED      3    4
  ZFX WILD-TYPE   13   11
        clus
vv       ZFX MUTATED ZFX WILD-TYPE
  CLUS_1           3            13
  CLUS_2           4            11
D67V8, multiclass

Clustering(68) Variable = KLHL13 MUTATION ANALYSIS
D68V1, binary
                  cls
clus                0  1
  KLHL13 MUTATED    5  5
  KLHL13 WILD-TYPE 11 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  KLHL13 MUTATED      5    5
  KLHL13 WILD-TYPE   11   10
        clus
vv       KLHL13 MUTATED KLHL13 WILD-TYPE
  CLUS_1              5               11
  CLUS_2              5               10
D68V2, binary
                  cls
clus                0  1
  KLHL13 MUTATED    2  8
  KLHL13 WILD-TYPE 12  9
[1] "tbl2"
                  cls
clus               [,1] [,2]
  KLHL13 MUTATED      2    8
  KLHL13 WILD-TYPE   12    9
        clus
vv       KLHL13 MUTATED KLHL13 WILD-TYPE
  CLUS_1              2               12
  CLUS_2              8                9
D68V3, binary
                  cls
clus                0  1
  KLHL13 MUTATED    3  6
  KLHL13 WILD-TYPE  4 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  KLHL13 MUTATED      3    6
  KLHL13 WILD-TYPE    4   10
        clus
vv       KLHL13 MUTATED KLHL13 WILD-TYPE
  CLUS_1              3                4
  CLUS_2              6               10
D68V4, binary
                  cls
clus                0  1
  KLHL13 MUTATED    1  8
  KLHL13 WILD-TYPE  3 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  KLHL13 MUTATED      1    8
  KLHL13 WILD-TYPE    3   11
        clus
vv       KLHL13 MUTATED KLHL13 WILD-TYPE
  CLUS_1              1                3
  CLUS_2              8               11
D68V5, multiclass
        clus
vv       KLHL13 MUTATED KLHL13 WILD-TYPE
  CLUS_1              3                5
  CLUS_2              4                7
  CLUS_3              3                9
D68V6, multiclass
        clus
vv       KLHL13 MUTATED KLHL13 WILD-TYPE
  CLUS_1              2                4
  CLUS_2              3                5
  CLUS_3              2                5
  CLUS_4              3                7
D68V7, binary
                  cls
clus                0  1
  KLHL13 MUTATED    6  4
  KLHL13 WILD-TYPE 10 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  KLHL13 MUTATED      6    4
  KLHL13 WILD-TYPE   10   11
        clus
vv       KLHL13 MUTATED KLHL13 WILD-TYPE
  CLUS_1              6               10
  CLUS_2              4               11
D68V8, multiclass

Clustering(69) Variable = NSUN7 MUTATION ANALYSIS
D69V1, binary
                 cls
clus               0  1
  NSUN7 MUTATED    3  2
  NSUN7 WILD-TYPE 13 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  NSUN7 MUTATED      3    2
  NSUN7 WILD-TYPE   13   13
        clus
vv       NSUN7 MUTATED NSUN7 WILD-TYPE
  CLUS_1             3              13
  CLUS_2             2              13
D69V2, binary
                 cls
clus               0  1
  NSUN7 MUTATED    2  3
  NSUN7 WILD-TYPE 12 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  NSUN7 MUTATED      2    3
  NSUN7 WILD-TYPE   12   14
        clus
vv       NSUN7 MUTATED NSUN7 WILD-TYPE
  CLUS_1             2              12
  CLUS_2             3              14
D69V3, binary
                 cls
clus               0  1
  NSUN7 MUTATED    1  2
  NSUN7 WILD-TYPE  6 14
[1] "tbl2"
                 cls
clus              [,1] [,2]
  NSUN7 MUTATED      1    2
  NSUN7 WILD-TYPE    6   14
        clus
vv       NSUN7 MUTATED NSUN7 WILD-TYPE
  CLUS_1             1               6
  CLUS_2             2              14
D69V4, binary
                 cls
clus               0  1
  NSUN7 MUTATED    1  2
  NSUN7 WILD-TYPE  3 17
[1] "tbl2"
                 cls
clus              [,1] [,2]
  NSUN7 MUTATED      1    2
  NSUN7 WILD-TYPE    3   17
        clus
vv       NSUN7 MUTATED NSUN7 WILD-TYPE
  CLUS_1             1               3
  CLUS_2             2              17
D69V5, multiclass
        clus
vv       NSUN7 MUTATED NSUN7 WILD-TYPE
  CLUS_1             1               7
  CLUS_2             2               9
  CLUS_3             2              10
D69V6, multiclass
        clus
vv       NSUN7 MUTATED NSUN7 WILD-TYPE
  CLUS_1             1               5
  CLUS_2             1               7
  CLUS_3             1               6
  CLUS_4             2               8
D69V7, binary
                 cls
clus               0  1
  NSUN7 MUTATED    3  2
  NSUN7 WILD-TYPE 13 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  NSUN7 MUTATED      3    2
  NSUN7 WILD-TYPE   13   13
        clus
vv       NSUN7 MUTATED NSUN7 WILD-TYPE
  CLUS_1             3              13
  CLUS_2             2              13
D69V8, multiclass

Clustering(70) Variable = VEGFC MUTATION ANALYSIS
D70V1, binary
                 cls
clus               0  1
  VEGFC MUTATED    3  3
  VEGFC WILD-TYPE 13 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  VEGFC MUTATED      3    3
  VEGFC WILD-TYPE   13   12
        clus
vv       VEGFC MUTATED VEGFC WILD-TYPE
  CLUS_1             3              13
  CLUS_2             3              12
D70V2, binary
                 cls
clus               0  1
  VEGFC MUTATED    1  5
  VEGFC WILD-TYPE 13 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  VEGFC MUTATED      1    5
  VEGFC WILD-TYPE   13   12
        clus
vv       VEGFC MUTATED VEGFC WILD-TYPE
  CLUS_1             1              13
  CLUS_2             5              12
D70V3, binary
                 cls
clus               0  1
  VEGFC MUTATED    2  4
  VEGFC WILD-TYPE  5 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  VEGFC MUTATED      2    4
  VEGFC WILD-TYPE    5   12
        clus
vv       VEGFC MUTATED VEGFC WILD-TYPE
  CLUS_1             2               5
  CLUS_2             4              12
D70V4, binary
                 cls
clus               0  1
  VEGFC MUTATED    0  6
  VEGFC WILD-TYPE  4 13
[1] "tbl2"
                 cls
clus              [,1] [,2]
  VEGFC MUTATED      0    6
  VEGFC WILD-TYPE    4   13
        clus
vv       VEGFC MUTATED VEGFC WILD-TYPE
  CLUS_1             0               4
  CLUS_2             6              13
D70V5, multiclass
        clus
vv       VEGFC MUTATED VEGFC WILD-TYPE
  CLUS_1             2               6
  CLUS_2             3               8
  CLUS_3             1              11
D70V6, multiclass
        clus
vv       VEGFC MUTATED VEGFC WILD-TYPE
  CLUS_1             1               5
  CLUS_2             3               5
  CLUS_3             0               7
  CLUS_4             2               8
D70V7, binary
                 cls
clus               0  1
  VEGFC MUTATED    1  5
  VEGFC WILD-TYPE 15 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  VEGFC MUTATED      1    5
  VEGFC WILD-TYPE   15   10
        clus
vv       VEGFC MUTATED VEGFC WILD-TYPE
  CLUS_1             1              15
  CLUS_2             5              10
D70V8, multiclass

Clustering(71) Variable = TMEM202 MUTATION ANALYSIS
D71V1, binary
                   cls
clus                 0  1
  TMEM202 MUTATED    1  4
  TMEM202 WILD-TYPE 15 11
[1] "tbl2"
                   cls
clus                [,1] [,2]
  TMEM202 MUTATED      1    4
  TMEM202 WILD-TYPE   15   11
        clus
vv       TMEM202 MUTATED TMEM202 WILD-TYPE
  CLUS_1               1                15
  CLUS_2               4                11
D71V2, binary
                   cls
clus                 0  1
  TMEM202 MUTATED    3  2
  TMEM202 WILD-TYPE 11 15
[1] "tbl2"
                   cls
clus                [,1] [,2]
  TMEM202 MUTATED      3    2
  TMEM202 WILD-TYPE   11   15
        clus
vv       TMEM202 MUTATED TMEM202 WILD-TYPE
  CLUS_1               3                11
  CLUS_2               2                15
D71V3, binary
                   cls
clus                 0  1
  TMEM202 MUTATED    2  3
  TMEM202 WILD-TYPE  5 13
[1] "tbl2"
                   cls
clus                [,1] [,2]
  TMEM202 MUTATED      2    3
  TMEM202 WILD-TYPE    5   13
        clus
vv       TMEM202 MUTATED TMEM202 WILD-TYPE
  CLUS_1               2                 5
  CLUS_2               3                13
D71V4, binary
                   cls
clus                 0  1
  TMEM202 MUTATED    2  3
  TMEM202 WILD-TYPE  2 16
[1] "tbl2"
                   cls
clus                [,1] [,2]
  TMEM202 MUTATED      2    3
  TMEM202 WILD-TYPE    2   16
        clus
vv       TMEM202 MUTATED TMEM202 WILD-TYPE
  CLUS_1               2                 2
  CLUS_2               3                16
D71V5, multiclass
        clus
vv       TMEM202 MUTATED TMEM202 WILD-TYPE
  CLUS_1               2                 6
  CLUS_2               1                10
  CLUS_3               2                10
D71V6, multiclass
        clus
vv       TMEM202 MUTATED TMEM202 WILD-TYPE
  CLUS_1               0                 6
  CLUS_2               1                 7
  CLUS_3               2                 5
  CLUS_4               2                 8
D71V7, binary
                   cls
clus                 0  1
  TMEM202 MUTATED    2  3
  TMEM202 WILD-TYPE 14 12
[1] "tbl2"
                   cls
clus                [,1] [,2]
  TMEM202 MUTATED      2    3
  TMEM202 WILD-TYPE   14   12
        clus
vv       TMEM202 MUTATED TMEM202 WILD-TYPE
  CLUS_1               2                14
  CLUS_2               3                12
D71V8, multiclass

Clustering(72) Variable = ERC2 MUTATION ANALYSIS
D72V1, binary
                cls
clus              0  1
  ERC2 MUTATED   10  5
  ERC2 WILD-TYPE  6 10
[1] "tbl2"
                cls
clus             [,1] [,2]
  ERC2 MUTATED     10    5
  ERC2 WILD-TYPE    6   10
        clus
vv       ERC2 MUTATED ERC2 WILD-TYPE
  CLUS_1           10              6
  CLUS_2            5             10
D72V2, binary
                cls
clus              0  1
  ERC2 MUTATED    9  6
  ERC2 WILD-TYPE  5 11
[1] "tbl2"
                cls
clus             [,1] [,2]
  ERC2 MUTATED      9    6
  ERC2 WILD-TYPE    5   11
        clus
vv       ERC2 MUTATED ERC2 WILD-TYPE
  CLUS_1            9              5
  CLUS_2            6             11
D72V3, binary
                cls
clus              0  1
  ERC2 MUTATED    1 12
  ERC2 WILD-TYPE  6  4
[1] "tbl2"
                cls
clus             [,1] [,2]
  ERC2 MUTATED      1   12
  ERC2 WILD-TYPE    6    4
        clus
vv       ERC2 MUTATED ERC2 WILD-TYPE
  CLUS_1            1              6
  CLUS_2           12              4
D72V4, binary
                cls
clus              0  1
  ERC2 MUTATED    1 12
  ERC2 WILD-TYPE  3  7
[1] "tbl2"
                cls
clus             [,1] [,2]
  ERC2 MUTATED      1   12
  ERC2 WILD-TYPE    3    7
        clus
vv       ERC2 MUTATED ERC2 WILD-TYPE
  CLUS_1            1              3
  CLUS_2           12              7
D72V5, multiclass
        clus
vv       ERC2 MUTATED ERC2 WILD-TYPE
  CLUS_1            4              4
  CLUS_2            8              3
  CLUS_3            3              9
D72V6, multiclass
        clus
vv       ERC2 MUTATED ERC2 WILD-TYPE
  CLUS_1            4              2
  CLUS_2            5              3
  CLUS_3            1              6
  CLUS_4            5              5
D72V7, binary
                cls
clus              0  1
  ERC2 MUTATED    6  9
  ERC2 WILD-TYPE 10  6
[1] "tbl2"
                cls
clus             [,1] [,2]
  ERC2 MUTATED      6    9
  ERC2 WILD-TYPE   10    6
        clus
vv       ERC2 MUTATED ERC2 WILD-TYPE
  CLUS_1            6             10
  CLUS_2            9              6
D72V8, multiclass

Clustering(73) Variable = GRM3 MUTATION ANALYSIS
D73V1, binary
                cls
clus              0  1
  GRM3 MUTATED    7  5
  GRM3 WILD-TYPE  9 10
[1] "tbl2"
                cls
clus             [,1] [,2]
  GRM3 MUTATED      7    5
  GRM3 WILD-TYPE    9   10
        clus
vv       GRM3 MUTATED GRM3 WILD-TYPE
  CLUS_1            7              9
  CLUS_2            5             10
D73V2, binary
                cls
clus              0  1
  GRM3 MUTATED    7  5
  GRM3 WILD-TYPE  7 12
[1] "tbl2"
                cls
clus             [,1] [,2]
  GRM3 MUTATED      7    5
  GRM3 WILD-TYPE    7   12
        clus
vv       GRM3 MUTATED GRM3 WILD-TYPE
  CLUS_1            7              7
  CLUS_2            5             12
D73V3, binary
                cls
clus             0 1
  GRM3 MUTATED   1 8
  GRM3 WILD-TYPE 6 8
[1] "tbl2"
                cls
clus             [,1] [,2]
  GRM3 MUTATED      1    8
  GRM3 WILD-TYPE    6    8
        clus
vv       GRM3 MUTATED GRM3 WILD-TYPE
  CLUS_1            1              6
  CLUS_2            8              8
D73V4, binary
                cls
clus              0  1
  GRM3 MUTATED    0  9
  GRM3 WILD-TYPE  4 10
[1] "tbl2"
                cls
clus             [,1] [,2]
  GRM3 MUTATED      0    9
  GRM3 WILD-TYPE    4   10
        clus
vv       GRM3 MUTATED GRM3 WILD-TYPE
  CLUS_1            0              4
  CLUS_2            9             10
D73V5, multiclass
        clus
vv       GRM3 MUTATED GRM3 WILD-TYPE
  CLUS_1            1              7
  CLUS_2            7              4
  CLUS_3            4              8
D73V6, multiclass
        clus
vv       GRM3 MUTATED GRM3 WILD-TYPE
  CLUS_1            3              3
  CLUS_2            4              4
  CLUS_3            0              7
  CLUS_4            5              5
D73V7, binary
                cls
clus              0  1
  GRM3 MUTATED    4  8
  GRM3 WILD-TYPE 12  7
[1] "tbl2"
                cls
clus             [,1] [,2]
  GRM3 MUTATED      4    8
  GRM3 WILD-TYPE   12    7
        clus
vv       GRM3 MUTATED GRM3 WILD-TYPE
  CLUS_1            4             12
  CLUS_2            8              7
D73V8, multiclass

Clustering(74) Variable = CDH12 MUTATION ANALYSIS
D74V1, binary
                 cls
clus               0  1
  CDH12 MUTATED    3  6
  CDH12 WILD-TYPE 13  9
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CDH12 MUTATED      3    6
  CDH12 WILD-TYPE   13    9
        clus
vv       CDH12 MUTATED CDH12 WILD-TYPE
  CLUS_1             3              13
  CLUS_2             6               9
D74V2, binary
                 cls
clus               0  1
  CDH12 MUTATED    2  7
  CDH12 WILD-TYPE 12 10
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CDH12 MUTATED      2    7
  CDH12 WILD-TYPE   12   10
        clus
vv       CDH12 MUTATED CDH12 WILD-TYPE
  CLUS_1             2              12
  CLUS_2             7              10
D74V3, binary
                 cls
clus               0  1
  CDH12 MUTATED    2  5
  CDH12 WILD-TYPE  5 11
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CDH12 MUTATED      2    5
  CDH12 WILD-TYPE    5   11
        clus
vv       CDH12 MUTATED CDH12 WILD-TYPE
  CLUS_1             2               5
  CLUS_2             5              11
D74V4, binary
                 cls
clus               0  1
  CDH12 MUTATED    0  7
  CDH12 WILD-TYPE  4 12
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CDH12 MUTATED      0    7
  CDH12 WILD-TYPE    4   12
        clus
vv       CDH12 MUTATED CDH12 WILD-TYPE
  CLUS_1             0               4
  CLUS_2             7              12
D74V5, multiclass
        clus
vv       CDH12 MUTATED CDH12 WILD-TYPE
  CLUS_1             3               5
  CLUS_2             3               8
  CLUS_3             3               9
D74V6, multiclass
        clus
vv       CDH12 MUTATED CDH12 WILD-TYPE
  CLUS_1             3               3
  CLUS_2             2               6
  CLUS_3             0               7
  CLUS_4             4               6
D74V7, binary
                 cls
clus               0  1
  CDH12 MUTATED    3  6
  CDH12 WILD-TYPE 13  9
[1] "tbl2"
                 cls
clus              [,1] [,2]
  CDH12 MUTATED      3    6
  CDH12 WILD-TYPE   13    9
        clus
vv       CDH12 MUTATED CDH12 WILD-TYPE
  CLUS_1             3              13
  CLUS_2             6               9
D74V8, multiclass

Clustering(75) Variable = SIRPB1 MUTATION ANALYSIS
D75V1, binary
                  cls
clus                0  1
  SIRPB1 MUTATED    4  3
  SIRPB1 WILD-TYPE 12 12
[1] "tbl2"
                  cls
clus               [,1] [,2]
  SIRPB1 MUTATED      4    3
  SIRPB1 WILD-TYPE   12   12
        clus
vv       SIRPB1 MUTATED SIRPB1 WILD-TYPE
  CLUS_1              4               12
  CLUS_2              3               12
D75V2, binary
                  cls
clus                0  1
  SIRPB1 MUTATED    4  3
  SIRPB1 WILD-TYPE 10 14
[1] "tbl2"
                  cls
clus               [,1] [,2]
  SIRPB1 MUTATED      4    3
  SIRPB1 WILD-TYPE   10   14
        clus
vv       SIRPB1 MUTATED SIRPB1 WILD-TYPE
  CLUS_1              4               10
  CLUS_2              3               14
D75V3, binary
                  cls
clus                0  1
  SIRPB1 MUTATED    0  6
  SIRPB1 WILD-TYPE  7 10
[1] "tbl2"
                  cls
clus               [,1] [,2]
  SIRPB1 MUTATED      0    6
  SIRPB1 WILD-TYPE    7   10
        clus
vv       SIRPB1 MUTATED SIRPB1 WILD-TYPE
  CLUS_1              0                7
  CLUS_2              6               10
D75V4, binary
                  cls
clus                0  1
  SIRPB1 MUTATED    0  6
  SIRPB1 WILD-TYPE  4 13
[1] "tbl2"
                  cls
clus               [,1] [,2]
  SIRPB1 MUTATED      0    6
  SIRPB1 WILD-TYPE    4   13
        clus
vv       SIRPB1 MUTATED SIRPB1 WILD-TYPE
  CLUS_1              0                4
  CLUS_2              6               13
D75V5, multiclass
        clus
vv       SIRPB1 MUTATED SIRPB1 WILD-TYPE
  CLUS_1              1                7
  CLUS_2              4                7
  CLUS_3              2               10
D75V6, multiclass
        clus
vv       SIRPB1 MUTATED SIRPB1 WILD-TYPE
  CLUS_1              2                4
  CLUS_2              3                5
  CLUS_3              0                7
  CLUS_4              2                8
D75V7, binary
                  cls
clus                0  1
  SIRPB1 MUTATED    3  4
  SIRPB1 WILD-TYPE 13 11
[1] "tbl2"
                  cls
clus               [,1] [,2]
  SIRPB1 MUTATED      3    4
  SIRPB1 WILD-TYPE   13   11
        clus
vv       SIRPB1 MUTATED SIRPB1 WILD-TYPE
  CLUS_1              3               13
  CLUS_2              4               11
D75V8, multiclass
                     V1                      V2                      V3 
              "CN_CNMF"      "METHLYATION_CNMF"             "RPPA_CNMF" 
                     V4                      V5                      V6 
   "RPPA_CHIERARCHICAL"          "MRNASEQ_CNMF" "MRNASEQ_CHIERARCHICAL" 
                     V7                      V8 
          "MIRSEQ_CNMF"  "MIRSEQ_CHIERARCHICAL" 
> q(save="no")
