Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-D3-A1Q1-06A-21D-A194-01	TCGA-D3-A1Q8-06A-11D-A192-01	TCGA-D3-A1QB-06A-11D-A192-01	TCGA-D3-A2J8-06A-11D-A194-01	TCGA-D3-A2JL-06A-11D-A194-01	TCGA-D3-A2JO-06A-11D-A194-01	TCGA-D3-A3ML-06A-11D-A219-01	TCGA-D3-A3MV-06A-11D-A219-01	TCGA-DA-A1HV-06A-21D-A194-01	TCGA-DA-A1I1-06A-12D-A194-01	TCGA-DA-A3F3-06A-11D-A20B-01	TCGA-EE-A17X-06A-11D-A191-01	TCGA-EE-A184-06A-11D-A194-01	TCGA-EE-A185-06A-11D-A194-01	TCGA-EE-A20C-06A-11D-A194-01	TCGA-EE-A29G-06A-12D-A194-01	TCGA-EE-A29L-06A-12D-A194-01	TCGA-EE-A29Q-06A-11D-A191-01	TCGA-EE-A29R-06A-11D-A191-01	TCGA-EE-A29S-06A-11D-A191-01	TCGA-EE-A29V-06A-12D-A191-01	TCGA-EE-A29X-06A-11D-A194-01	TCGA-EE-A2A1-06A-11D-A191-01	TCGA-EE-A2A2-06A-11D-A194-01	TCGA-EE-A2A5-06A-11D-A191-01	TCGA-EE-A2GD-06A-11D-A194-01	TCGA-EE-A2GJ-06A-11D-A194-01	TCGA-EE-A2GL-06A-11D-A194-01	TCGA-EE-A2GM-06B-11D-A194-01	TCGA-EE-A2GN-06A-11D-A194-01	TCGA-EE-A2GP-06A-11D-A191-01	TCGA-EE-A2GU-06A-11D-A194-01	TCGA-EE-A2MC-06A-12D-A191-01	TCGA-EE-A2MD-06A-11D-A191-01	TCGA-EE-A2MF-06A-11D-A219-01	TCGA-EE-A2ML-06A-11D-A191-01	TCGA-EE-A2MM-06A-11D-A194-01	TCGA-EE-A2MN-06A-11D-A191-01	TCGA-EE-A3AC-06A-11D-A194-01	TCGA-EE-A3J7-06A-11D-A20B-01	TCGA-EE-A3J8-06A-11D-A20B-01	TCGA-EE-A3JA-06A-11D-A20B-01	TCGA-EE-A3JI-06A-11D-A219-01	TCGA-ER-A195-06A-11D-A194-01	TCGA-ER-A199-06A-11D-A191-01	TCGA-ER-A19D-06A-11D-A191-01	TCGA-ER-A19N-06A-11D-A191-01	TCGA-ER-A2NC-06A-11D-A191-01	TCGA-ER-A2NE-06A-21D-A194-01	TCGA-ER-A2NH-06A-11D-A194-01	TCGA-FS-A1YW-06A-11D-A191-01	TCGA-FS-A1Z0-06A-11D-A191-01	TCGA-FS-A1Z3-06A-11D-A191-01	TCGA-FS-A1ZB-06A-12D-A191-01	TCGA-FS-A1ZE-06A-11D-A191-01	TCGA-FS-A1ZP-06A-11D-A191-01	TCGA-FS-A1ZQ-06A-11D-A191-01	TCGA-FS-A1ZT-06A-11D-A191-01	TCGA-FS-A1ZW-06A-12D-A191-01	TCGA-FS-A1ZY-06A-11D-A191-01	TCGA-GN-A267-06A-21D-A194-01	TCGA-GN-A268-06A-11D-A194-01	
Amplification Peak  1	1p13.2 	chr1:115474768-115492397(probes 64613:64620)    	chr1:115476840-115489038(probes 64614:64619)    	chr1:114937873-115836019(probes 64350:64910)    	0.0035701	  0.0035701		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	0	0	1	1	1	0	0	0	2	0	0	0	0	1	2	0	0	0	2	1	0	0	0	0	1	1	0	0	2	0	0	1	0	0	1	0	0	1	0	1	0	0	1	2	0	0	0	2	0	0	0	0	0	0	1	0	0	0	1	0	
Amplification Peak  2	1q31.2 	chr1:192415363-192421226(probes 93928:93934)    	chr1:192416201-192420896(probes 93929:93933)    	chr1:192416201-192424786(probes 93929:93936)    	0.045239	    0.20452		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	1	1	1	1	0	1	1	0	1	2	0	2	1	0	1	2	0	2	1	0	0	1	1	0	1	2	1	2	2	0	1	0	0	0	0	0	2	1	1	0	1	0	0	1	2	0	0	0	1	0	1	1	0	0	2	1	2	0	2	1	0	
Amplification Peak  3	1q44   	chr1:237145919-249250621(probes 122543:129199)  	chr1:246015893-246125066(probes 128628:128725)  	chr1:237146516-249250621(probes 122544:129199)  	0.020754	   0.029564		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	1	1	1	1	1	1	1	0	1	2	0	2	1	0	1	2	0	2	0	0	0	1	1	0	1	2	0	2	2	0	2	0	0	1	2	0	2	1	1	0	1	0	0	1	1	0	0	0	1	0	1	1	0	0	2	1	2	0	2	1	0	
Amplification Peak  4	5p15.33	chr5:1019815-1309073(probes 469827:469837)          	chr5:1020355-1308551(probes 469828:469836)          	chr5:1020355-1313666(probes 469828:469839)          	0.20452	    0.20452		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	1	0	0	2	0	1	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	1	0	0	0	0	2	0	1	0	0	1	0	0	
Amplification Peak  5	6p25.1 	chr6:2311646-14532705(probes 571289:580024)        	chr6:5654713-5684889(probes 573586:573614)          	chr6:1-33412156(probes 570331:589796)              	0.00090095	 0.00090095		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	1	1	0	1	1	2	2	1	2	0	1	1	0	1	1	0	2	1	1	0	0	0	2	1	2	1	0	2	1	1	0	1	1	0	2	1	0	1	1	1	2	0	1	1	2	1	2	0	1	2	1	0	1	2	0	2	1	1	1	1	
Amplification Peak  6	7p21.3 	chr7:1-11104052(probes 666868:670954)               	chr7:8623715-8657318(probes 670085:670104)          	chr7:1-12344987(probes 666868:671947)               	0.011186	   0.011186		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	2	1	1	1	1	0	0	0	0	0	1	2	0	1	0	0	0	0	1	0	0	0	0	0	2	0	2	0	2	0	1	0	0	1	1	1	
Amplification Peak  7	11q14.1	chr11:64592727-95916902(probes 1013747:1030773)  	chr11:77382836-77602543(probes 1019382:1019479)  	chr11:77382836-77610141(probes 1019382:1019482)  	0.23814	    0.23814		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	2	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	2	0	0	0	2	0	0	0	1	
Amplification Peak  8	12q15  	chr12:69102070-71303057(probes 1092602:1094092)  	chr12:69590825-69624486(probes 1092950:1092968)  	chr12:67564679-72979226(probes 1091477:1095016)  	0.0029707	  0.0029707		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	2	0	0	0	1	1	
Amplification Peak  9	15q26.1	chr15:70195332-102531392(probes 1262618:1280725)	chr15:77290270-102531392(probes 1266352:1280725)	chr15:77290270-102531392(probes 1266352:1280725)	0.19558	    0.19558		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	1	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	2	0	1	0	1	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	2	1	0	0	1	1	0	
Amplification Peak 10	17q25.3	chr17:48473854-81195210(probes 1341253:1358544)  	chr17:80571061-80572627(probes 1358357:1358361)  	chr17:48751877-81195210(probes 1341402:1358544)  	0.017217	   0.017217		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	0	1	0	1	1	1	2	1	0	1	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	1	1	0	0	1	1	0	0	0	2	1	2	0	1	0	0	0	0	0	1	1	0	0	0	2	
Amplification Peak 11	20q13.2	chr20:46817357-52442168(probes 1452242:1455774)  	chr20:50398002-50486628(probes 1454467:1454509)  	chr20:49556879-51149531(probes 1453839:1454916)  	0.10989	    0.10989		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	0	0	1	0	0	1	2	2	0	0	2	0	0	0	1	0	1	0	0	0	2	0	1	0	0	0	1	1	1	1	1	0	0	0	0	0	2	2	0	1	1	0	1	0	0	2	0	0	0	1	0	0	2	0	1	2	0	2	1	1	
Amplification Peak 12	22q13.2	chr22:41132403-42445765(probes 1494546:1495303)  	chr22:41506594-41834225(probes 1494722:1495006)  	chr22:40649696-43355943(probes 1494332:1495681)  	0.016432	   0.016432		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	0	1	2	0	2	1	1	0	0	2	0	0	0	2	0	1	0	0	1	0	1	1	0	0	0	1	1	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	1	1	2	1	1	
Deletion Peak  1	1p36.13 	chr1:1-227508249(probes 1:116179)                   	chr1:9005321-24196400(probes 3482:11459)             	chr1:1-24449820(probes 1:11530)                      	0.070916	   0.070916		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	1	0	0	1	1	1	1	0	0	0	0	0	1	1	1	0	0	
Deletion Peak  2	4q34.3  	chr4:178360197-191154276(probes 464935:469777)    	chr4:181521852-182082855(probes 466567:466570)    	chr4:181525132-182303211(probes 466568:466770)    	0.13013	    0.13174		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	1	1	0	0	0	1	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	
Deletion Peak  3	5q31.1  	chr5:1-180915260(probes 469778:570330)               	chr5:135261333-135280836(probes 542760:542771)    	chr5:116467151-180228141(probes 531765:570268)    	0.0057912	          1		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	1	1	0	1	1	0	0	1	0	1	0	1	0	1	0	1	1	1	0	1	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	1	1	0	1	1	1	0	0	0	1	0	0	0	0	1	0	0	1	1	1	0	1	1	
Deletion Peak  4	5q31.1  	chr5:115778741-180258856(probes 531397:570284)    	chr5:135261333-135280836(probes 542760:542771)    	chr5:116467151-180228141(probes 531765:570268)    	0.0057912	  0.0057912		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	1	1	0	1	1	0	0	1	0	1	0	1	0	1	0	1	1	1	0	1	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	1	1	0	1	1	1	0	0	0	1	0	0	0	0	1	0	0	1	1	1	0	1	1	
Deletion Peak  5	6q16.3  	chr6:64422985-171115067(probes 605244:666867)      	chr6:101300179-101332214(probes 625696:625709)    	chr6:98790549-171115067(probes 624127:666867)      	0.0087459	    0.16997		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	1	1	0	1	1	1	0	1	1	0	1	1	1	1	1	1	1	1	1	1	1	0	1	0	1	1	1	1	0	1	0	0	0	1	1	0	1	1	1	1	0	1	0	1	0	1	1	0	1	1	0	1	1	1	0	1	1	
Deletion Peak  6	6q22.31 	chr6:97531677-171115067(probes 623467:666867)      	chr6:124105198-125149024(probes 638573:639214)    	chr6:98790549-171115067(probes 624127:666867)      	0.010546	    0.16997		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	1	1	1	0	1	1	1	0	1	1	0	1	1	1	1	1	1	1	1	1	1	1	0	1	0	1	1	1	1	0	1	0	0	0	1	1	0	1	1	1	1	1	1	0	1	0	1	1	0	1	0	0	1	1	1	0	1	1	
Deletion Peak  7	6q26    	chr6:152422456-171115067(probes 656407:666867)    	chr6:161767520-163153207(probes 662487:663097)    	chr6:98790549-171115067(probes 624127:666867)      	0.0028011	   0.024893		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	1	1	1	0	1	1	1	0	1	1	0	1	1	1	1	1	1	1	1	1	1	1	0	1	0	1	1	1	1	0	1	0	0	0	1	1	0	1	1	1	1	1	1	0	1	0	1	1	0	1	0	0	1	1	1	1	1	1	
Deletion Peak  8	7q31.1  	chr7:45950030-129080432(probes 692887:732670)      	chr7:110236682-111354928(probes 722989:723268)    	chr7:100317466-113530050(probes 717719:724294)    	0.16884	    0.15867		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	1	0	0	
Deletion Peak  9	9p23    	chr9:8310705-12693402(probes 834354:836096)          	chr9:8310705-10619051(probes 834354:835688)          	chr9:4966912-30010807(probes 832802:847863)          	2.2653e-06	   0.050898		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	0	0	1	0	1	1	1	1	1	1	0	1	1	1	1	1	0	1	1	1	0	0	1	1	0	1	1	1	1	1	0	1	1	1	1	1	0	1	1	1	1	1	1	1	1	0	1	1	1	0	1	1	0	0	1	1	1	1	0	1	
Deletion Peak 10	9p21.3  	chr9:21865498-21997722(probes 843249:843313)        	chr9:21959052-21997722(probes 843300:843313)        	chr9:4966912-30010807(probes 832802:847863)          	6.9278e-40	 7.1673e-38		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	0	0	1	0	1	1	1	1	1	1	0	1	1	1	1	1	1	1	1	1	0	0	1	1	0	1	1	1	1	1	0	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	0	1	1	1	1	0	1	
Deletion Peak 11	10p15.3 	chr10:1-857150(probes 897861:898006)                   	chr10:1-742144(probes 897861:897948)                   	chr10:1-781123(probes 897861:897976)                   	0.088271	   0.091503		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	0	0	0	1	0	1	0	1	0	0	1	1	0	1	1	1	0	1	0	1	0	1	1	0	1	0	1	1	1	0	0	0	0	0	1	0	0	0	1	1	1	0	1	1	0	1	1	1	0	1	1	0	0	0	1	0	1	1	1	1	
Deletion Peak 12	10q23.31	chr10:89617158-90034038(probes 950066:950496)      	chr10:89617402-89735596(probes 950067:950255)      	chr10:89662107-89701031(probes 950133:950182)      	0.0024285	  0.0024285		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	0	0	1	1	0	1	0	1	0	0	0	1	0	1	1	1	0	0	0	1	0	1	1	1	1	0	1	1	1	1	0	1	1	0	1	0	0	0	1	1	1	0	1	1	0	1	1	1	0	1	1	0	0	0	1	0	1	1	1	0	
Deletion Peak 13	11q24.2 	chr11:103906053-135006516(probes 1035872:1056050)	chr11:124617940-124635034(probes 1049615:1049621)	chr11:92784204-135006516(probes 1028847:1056050)  	1.1886e-08	 1.1886e-08		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	0	1	1	1	1	1	1	1	0	0	0	1	0	1	1	1	1	1	0	0	1	1	0	1	0	0	0	0	1	1	1	0	1	1	1	0	1	1	1	0	0	1	1	1	0	1	1	0	1	1	1	1	0	1	1	1	1	1	1	
Deletion Peak 14	12p12.3 	chr12:1-20169548(probes 1056051:1067090)             	chr12:16338433-16437394(probes 1064745:1064805)    	chr12:16368704-16401704(probes 1064768:1064789)    	0.078701	   0.078273		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	1	0	0	1	1	0	0	0	0	1	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	
Deletion Peak 15	12q23.3 	chr12:74931350-133851895(probes 1095950:1130029)  	chr12:103976914-104163845(probes 1113872:1114033)	chr12:104068705-104073351(probes 1113953:1113954)	0.065123	   0.069066		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	1	0	0	1	0	1	0	0	0	0	1	1	0	1	0	1	0	1	0	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	1	1	0	1	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	1	1	
Deletion Peak 16	13q14.2 	chr13:1-115169878(probes 1130030:1186705)         	chr13:48984816-49108009(probes 1148797:1148901)    	chr13:48996547-48997006(probes 1148810:1148811)    	0.25058	    0.24281		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	0	1	0	0	0	1	1	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 17	14q31.3 	chr14:72396248-107349540(probes 1215495:1236175)  	chr14:85994292-86099301(probes 1224324:1224407)    	chr14:77234219-107349540(probes 1218483:1236175)  	0.050898	   0.050898		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	1	0	1	1	1	0	0	0	0	0	1	0	0	0	0	1	1	0	1	1	0	1	0	0	0	1	1	1	1	0	0	0	1	0	1	0	1	1	0	1	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	1	1	
Deletion Peak 18	15q13.3 	chr15:1-54921359(probes 1236176:1252776)           	chr15:33044592-33361732(probes 1239514:1239779)    	chr15:1-50421829(probes 1236176:1249802)           	0.070916	   0.070916		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	0	0	0	1	0	1	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	1	0	0	1	0	0	1	0	1	0	0	1	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	1	0	
Deletion Peak 19	16p13.3 	chr16:5144019-7771745(probes 1282392:1283891)        	chr16:6066397-7771745(probes 1283029:1283891)        	chr16:7369731-7376241(probes 1283461:1283462)        	0.025352	   0.024893		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	1	0	
Deletion Peak 20	16q23.3 	chr16:68265240-90354753(probes 1308436:1321540)    	chr16:82658729-83830499(probes 1317829:1318951)    	chr16:82460190-83217258(probes 1317563:1318192)    	0.16472	    0.15867		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	1	1	0	0	0	1	1	0	0	0	1	0	1	0	1	0	1	1	0	1	1	
Deletion Peak 21	21q11.2 	chr21:1-22117102(probes 1462493:1466744)           	chr21:15474707-15580753(probes 1462536:1462584)    	chr21:15516331-15518204(probes 1462561:1462562)    	0.12244	    0.12731		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	1	1	0	0	1	
Amplification Peak  1 - CN values	1p13.2 	chr1:115474768-115492397(probes 64613:64620)    	chr1:115476840-115489038(probes 64614:64619)    	chr1:114937873-115836019(probes 64350:64910)    	0.0035701	  0.0035701		Actual Copy Change Given	1.0256	0.0077928	0.013911	-0.023292	0.12741	0.34365	0.76926	-0.10355	0.0054279	0.0019418	3.2285	-0.0089704	-0.022881	0.003191	0.0015041	0.2035	1.739	0	-0.38085	0.0093098	1.9386	0.34542	0.010424	0.080767	0.077542	0.0072217	0.72918	0.37413	-0.022881	0.003191	0.94048	0.0037465	-0.014641	0.51874	0.0090312	0.0051862	0.51404	0.014	0.011958	0.67586	0.039619	0.18428	0.046772	0.0027902	0.1382	1.5432	0	0.0011093	0.013987	3.6569	0.011261	-0.1945	-0.021251	0.05908	0	0.0019418	0.23954	-0.26769	0.077645	-0.03286	0.13228	0.013213	
Amplification Peak  2 - CN values	1q31.2 	chr1:192415363-192421226(probes 93928:93934)    	chr1:192416201-192420896(probes 93929:93933)    	chr1:192416201-192424786(probes 93929:93936)    	0.045239	    0.20452		Actual Copy Change Given	1.0256	0.55602	0.75108	0.38287	0.12741	-0.10413	0.75758	0.65811	-0.42963	0.87727	1.8581	-0.0089704	3.6569	0.83549	-0.010443	0.2035	0.93427	0	1.4849	0.61009	0.019783	-0.36891	0.6257	0.76239	0.077542	0.36838	1.3256	0.3378	0.99252	1.2382	-0.0063668	0.50811	-0.014641	0.0016642	0.0090312	-0.0083886	0.011539	1.1865	0.69486	0.61945	0.039619	0.18428	0.046772	0.0016642	0.1382	3.6569	0	0.0011093	-0.86542	0.45071	0.012516	0.54665	0.74326	0.0075323	0	1.4255	0.23954	0.93488	0.077645	2.0654	0.82748	-0.0097851	
Amplification Peak  3 - CN values	1q44   	chr1:237145919-249250621(probes 122543:129199)  	chr1:246015893-246125066(probes 128628:128725)  	chr1:237146516-249250621(probes 122544:129199)  	0.020754	   0.029564		Actual Copy Change Given	1.0755	0.5142	0.73808	0.38287	0.12741	0.51814	0.76811	0.63994	-0.0059522	0.87727	1.8581	0.0015936	1.6114	0.79007	0.023913	0.2035	0.93427	0	1.4769	-0.005261	0.019783	-0.38712	0.6257	0.76239	0.077542	0.36838	1.339	-0.0026322	1.0644	1.2805	0	0.92898	-0.014641	0.0016642	0.74252	1.1895	-0.07276	1.2	0.70304	0.61577	0.039619	0.18428	0.046772	0.0016642	0.1382	0.64005	0	0.0011093	0.041818	0.4463	0.020203	0.54013	0.76849	0.0075323	-0.0016428	1.4255	0.32205	0.92196	0.072179	2.0654	0.89387	-0.0097851	
Amplification Peak  4 - CN values	5p15.33	chr5:1019815-1309073(probes 469827:469837)          	chr5:1020355-1308551(probes 469828:469836)          	chr5:1020355-1313666(probes 469828:469839)          	0.20452	    0.20452		Actual Copy Change Given	0.056228	0.023706	0.006109	-0.014706	-0.52358	0.3117	-0.00097017	-0.1088	1.3235	-0.0012058	0.77753	-0.90324	1.3044	-0.8808	0.038273	1.1212	-0.15149	-0.12889	-0.018902	-0.021921	0.012516	0.0061268	0.058795	-0.51063	-0.015772	-0.15528	0.08161	-0.022806	0.50307	-0.012851	-0.031905	0.0087528	-0.020831	0.0027745	0.0015255	-0.0053492	-0.33422	-0.00060521	0.00035767	-0.070402	0.024829	0.72935	0.32476	0.011261	-0.16307	0.0023135	0.28074	-0.0083834	-0.97131	0.47444	-0.018216	0.048972	-0.037082	-0.012162	0.90742	-0.0033243	0.35659	-0.62083	-0.24211	0.47049	-0.22182	-0.21206	
Amplification Peak  5 - CN values	6p25.1 	chr6:2311646-14532705(probes 571289:580024)        	chr6:5654713-5684889(probes 573586:573614)          	chr6:1-33412156(probes 570331:589796)              	0.00090095	 0.00090095		Actual Copy Change Given	1.0962	0.0062481	0.45275	0.11932	0.010146	0.55931	0.78003	1.1451	1.0674	0.38386	3.6569	-0.022539	0.81708	0.80982	-0.4635	0.20748	0.59548	-0.77931	2.8196	0.62424	0.66198	0.098177	0.093475	0.088425	1.0312	0.36444	1.3529	0.23566	-0.038306	1.3539	0.39065	0.49389	-0.11813	0.51403	0.7429	0.0085247	2.3236	0.8059	-0.0036011	0.66383	0.10964	0.78361	3.6569	0.0056919	0.25953	0.54189	1.008	0.49459	1.0002	0.010424	0.81025	1.4581	0.6954	-0.016599	0.89413	1.4546	-0.14978	1.1683	0.65213	0.53257	0.45037	0.86054	
Amplification Peak  6 - CN values	7p21.3 	chr7:1-11104052(probes 666868:670954)               	chr7:8623715-8657318(probes 670085:670104)          	chr7:1-12344987(probes 666868:671947)               	0.011186	   0.011186		Actual Copy Change Given	1.046	0.019223	0.0058309	-0.0059522	0.15502	0.028238	0.81259	-0.12579	0.388	-0.0023553	-0.021647	0.01105	0.0027745	0.036512	-0.47549	0.0043021	1.071	0.98313	-0.027398	0.0072217	0.027357	0.059499	-0.025136	0.087267	-0.44224	0.0020805	1.3863	0.2573	0.52731	0.81084	0.34096	0	-0.0020784	0.0026357	0.0022193	0.0011595	0.12668	1.2532	0.033267	0.68626	0.031718	-0.40168	-0.13135	-0.0023553	0.25183	-0.00059897	-0.0095426	-0.0055375	0.06602	0.0081959	1.5744	0.0065262	3.4088	0.01433	3.2935	0.024408	0.15906	-0.15298	0.091081	0.52941	0.72565	0.14325	
Amplification Peak  7 - CN values	11q14.1	chr11:64592727-95916902(probes 1013747:1030773)  	chr11:77382836-77602543(probes 1019382:1019479)  	chr11:77382836-77610141(probes 1019382:1019482)  	0.23814	    0.23814		Actual Copy Change Given	-0.62029	-0.51893	0.00069327	0	-0.51671	-0.47119	-0.0055375	-0.11874	-0.41146	-0.45826	3.6569	0.0045093	-0.012827	-0.015825	0.0072878	-0.078622	-0.72292	-0.74812	-0.39764	0.012097	-0.00015651	0.091932	-0.027563	-0.40582	-0.55078	0.0030522	0.00099343	-0.0049844	-0.60496	-0.016237	0.31354	-0.026577	0.36244	-0.55987	-0.0070576	0.0030908	0.91057	0.00022648	-0.010784	-0.77124	-0.4033	0.15466	0.38176	-0.017516	-0.26095	-0.46699	0.34039	-0.026714	-0.96205	-0.0016629	0.017264	-0.050641	0.004719	0.98866	-0.0071518	-0.011749	0.093621	2.2717	-0.29052	-0.033405	-0.60516	0.16325	
Amplification Peak  8 - CN values	12q15  	chr12:69102070-71303057(probes 1092602:1094092)  	chr12:69590825-69624486(probes 1092950:1092968)  	chr12:67564679-72979226(probes 1091477:1095016)  	0.0029707	  0.0029707		Actual Copy Change Given	2.6354	0.0065262	-0.00079963	-0.0011087	-0.23753	0.11383	-0.0043732	0.5763	0.15768	-0.42396	-0.026304	0.0137	-0.0047079	0.003191	-0.45955	-0.17107	-0.015329	-0.73258	-0.017666	0.032422	0.0041632	-0.66335	-0.020549	-0.383	-0.53756	-0.0044312	0.0066035	0.0019418	-0.015454	0	-0.24168	-0.55537	0.020203	0	-0.0083005	-0.0020283	0.010564	-0.024575	0.0097276	-0.14017	-0.0090625	-0.38933	3.6569	0.0086135	-0.25067	0.051057	-0.0038779	-0.0034627	3.5433	0.0086135	-0.0008316	-0.08559	-0.012221	0.0073609	0.00087604	-0.0013858	2.1806	-0.26714	0.085292	-0.037241	0.16655	0.49044	
Amplification Peak  9 - CN values	15q26.1	chr15:70195332-102531392(probes 1262618:1280725)	chr15:77290270-102531392(probes 1266352:1280725)	chr15:77290270-102531392(probes 1266352:1280725)	0.19558	    0.19558		Actual Copy Change Given	-0.0079294	-0.0088526	0.013213	-0.055072	0.17407	0.0082155	0.00055459	0.63883	0.11712	-0.46664	0.77387	-0.0050548	-0.015996	-0.010094	0.017191	-0.031905	-0.41135	-0.12168	0.0051359	-0.0024938	-0.01414	0.10211	0.32495	0	-0.53715	-0.0073339	-0.0030475	0.00083195	0.46981	1.4455	0.097397	0.43699	-0.10026	0.53116	-0.38414	-0.031992	-0.24216	0.59919	-0.032723	-0.22047	0.025952	-0.36016	0.44833	-0.0098185	0.087534	0.13964	0.010982	-0.00041585	-0.031967	0.0066653	0.020203	-0.3126	0.75834	0.010703	-0.0018958	2.8272	0.10906	-0.25842	-0.0027897	0.50259	0.12491	-0.046718	
Amplification Peak 10 - CN values	17q25.3	chr17:48473854-81195210(probes 1341253:1358544)  	chr17:80571061-80572627(probes 1358357:1358361)  	chr17:48751877-81195210(probes 1341402:1358544)  	0.017217	   0.017217		Actual Copy Change Given	0.50463	-0.02603	0.04344	0.021463	0.21868	-0.18451	0.75987	0.45309	0.5649	0.93067	0.75777	0.0090996	0.72481	0.71039	-1.0023	0.037359	0.50776	-0.015741	0.16445	0.055529	-0.036538	-0.62404	-0.058462	0.033571	0.020871	-0.041444	-0.071256	-0.01637	0.44285	-0.01354	0.47753	-0.040752	-0.12629	0.50394	-0.036674	0.00032744	-0.076259	0.60948	0.5523	-0.20571	-1.2929	0.24787	0.46058	-0.015741	-0.018353	-0.021965	0.9365	0.52853	3.5307	0.018523	0.87847	-0.043793	0.012795	-0.014366	-0.029268	0.00027728	0.89131	0.63317	-0.17746	-0.093001	-0.22662	0.93854	
Amplification Peak 11 - CN values	20q13.2	chr20:46817357-52442168(probes 1452242:1455774)  	chr20:50398002-50486628(probes 1454467:1454509)  	chr20:49556879-51149531(probes 1453839:1454916)  	0.10989	    0.10989		Actual Copy Change Given	1.0333	-0.012851	0.011818	0.0012481	0.47358	0	-0.023429	0.53837	1.8341	2.7737	0.032281	-0.02651	1.4907	-0.01904	0.056295	-0.15477	0.44037	-0.0085913	0.54646	-0.010922	-0.032607	0.098613	0.97708	0.0079387	0.57255	-0.04211	0.0083962	-0.010784	0.43919	0.67345	0.89433	0.44952	0.35072	0.011679	-0.012438	0.010057	0.078006	0.020151	1.2825	1.183	0.03863	0.28906	0.44054	-0.018353	0.20736	-0.017161	-0.0094046	1.0237	0.0032661	0.064368	0	0.23829	0.016146	-0.028081	1.6769	-0.0027707	0.13169	2.0284	0.098777	1.015	0.16055	0.13347	
Amplification Peak 12 - CN values	22q13.2	chr22:41132403-42445765(probes 1494546:1495303)  	chr22:41506594-41834225(probes 1494722:1495006)  	chr22:40649696-43355943(probes 1494332:1495681)  	0.016432	   0.016432		Actual Copy Change Given	0.53239	-0.54975	0.016146	0.0036076	0.21547	1.396	0.0069435	1.1299	0.4519	0.51002	0.041588	-0.062295	1.3872	-0.056712	0.01803	0.082765	2.4143	0.093475	0.52407	0.013353	-0.033269	0.14509	-0.0030475	0.77102	0.15678	-0.025072	0.0013868	-0.0029091	0.4257	0.69409	-0.45971	-0.054016	-0.0083005	0.021043	0.022725	0.0062984	-0.97438	1.5803	-0.075211	1.1582	-0.012851	-0.32799	-0.093271	-0.023977	0.0040243	-0.56488	0.0016067	0.021603	-0.021298	0.012795	-0.82097	0.046984	-0.011473	-0.03817	3.5664	0.022585	0.13155	0.32947	0.27403	1.2409	0.34545	0.12358	
Deletion Peak  1 - CN values	1p36.13 	chr1:1-227508249(probes 1:116179)                   	chr1:9005321-24196400(probes 3482:11459)             	chr1:1-24449820(probes 1:11530)                      	0.070916	   0.070916		Actual Copy Change Given	-0.63443	-0.039394	0.013911	-0.023292	-0.014782	-0.19918	-0.0053992	-0.13974	0	0.021561	0.023987	-0.0089704	-0.022881	-0.091084	0.0029381	0.2035	0.65461	0	-0.37482	0.0093098	-0.0095426	0.38905	0.010424	0.045871	0.09504	-0.017666	0.015168	-0.0051227	-0.088282	-0.0026322	0.6666	0.01872	-0.014641	-0.56206	0.0090312	0.0051862	0.43316	-0.0026905	-0.041974	0.7215	0.039619	-0.96949	0.20567	-0.56873	-0.0040418	-0.5545	0	-0.005814	-0.97351	-0.45586	-0.80845	-0.1945	-0.013677	0.05908	0	0.0019418	0.060222	-0.28156	-0.22151	-0.12244	0.13228	0.019923	
Deletion Peak  2 - CN values	4q34.3  	chr4:178360197-191154276(probes 464935:469777)    	chr4:181521852-182082855(probes 466567:466570)    	chr4:181525132-182303211(probes 466568:466770)    	0.13013	    0.13174		Actual Copy Change Given	-0.57644	-0.4959	-0.014916	-0.026988	0.032704	-0.43696	-0.010784	-0.1025	0.39662	0.38717	-0.021921	0.022794	0.026514	0.046275	0.90723	0.52573	0.0069435	0.0049969	-0.030267	0.013353	0.026514	-1.2929	0	0.085457	-0.11825	0.003191	-0.0070576	0.0033299	-0.60864	-0.0084385	0.38221	-0.54027	0.0011093	-0.015466	0.0024969	-0.006048	-0.90428	-0.073313	0.038489	0.48992	-0.39697	-1.2929	-0.022058	-0.0055375	0.0020805	-0.5536	-0.005814	-0.005814	0.024764	-0.46249	-0.0049844	-0.36669	-0.0038779	0.010146	-0.98215	-0.0083005	0.087143	0.067232	0.048093	0.0054139	0.09101	0.15129	
Deletion Peak  3 - CN values	5q31.1  	chr5:1-180915260(probes 469778:570330)               	chr5:135261333-135280836(probes 542760:542771)    	chr5:116467151-180228141(probes 531765:570268)    	0.0057912	          1		Actual Copy Change Given	0	-0.50888	0.006109	0.00069327	-0.52654	-0.10549	-0.017529	-0.11308	-0.42615	-0.00013862	-0.057198	-0.8907	-0.0033243	-0.86594	0.017604	-0.37909	-0.069838	-0.11234	-0.0092666	-0.64893	-0.68067	-0.68939	0.058031	-0.86095	0	-0.16034	0.16385	-0.01849	-0.58098	-0.010646	-0.041592	-0.010232	0.00069327	0.0013868	0.0015255	-0.0065895	-0.33422	-0.00060521	0.022164	-0.12434	-0.9207	0.17672	-0.72685	-0.54256	-0.16307	0.0023135	0.035965	0.001803	-0.95706	0.40827	0.017264	0.04344	-0.037082	-0.45404	-0.0030277	-0.0033243	-0.35726	-0.62083	-0.24211	-0.0070892	-0.22182	-0.90055	
Deletion Peak  4 - CN values	5q31.1  	chr5:115778741-180258856(probes 531397:570284)    	chr5:135261333-135280836(probes 542760:542771)    	chr5:116467151-180228141(probes 531765:570268)    	0.0057912	  0.0057912		Actual Copy Change Given	0	-0.50888	0.006109	0.00069327	-0.52654	-0.10549	-0.017529	-0.11308	-0.42615	-0.00013862	-0.057198	-0.8907	-0.0033243	-0.86594	0.017604	-0.37909	-0.069838	-0.11234	-0.0092666	-0.64893	-0.68067	-0.68939	0.058031	-0.86095	0	-0.16034	0.16385	-0.01849	-0.58098	-0.010646	-0.041592	-0.010232	0.00069327	0.0013868	0.0015255	-0.0065895	-0.33422	-0.00060521	0.022164	-0.12434	-0.9207	0.17672	-0.72685	-0.54256	-0.16307	0.0023135	0.035965	0.001803	-0.95706	0.40827	0.017264	0.04344	-0.037082	-0.45404	-0.0030277	-0.0033243	-0.35726	-0.62083	-0.24211	-0.0070892	-0.22182	-0.90055	
Deletion Peak  5 - CN values	6q16.3  	chr6:64422985-171115067(probes 605244:666867)      	chr6:101300179-101332214(probes 625696:625709)    	chr6:98790549-171115067(probes 624127:666867)      	0.0087459	    0.16997		Actual Copy Change Given	-0.61431	0.027076	-0.0088526	-0.0020379	0.040044	-0.43761	-0.90206	-0.094856	-0.4395	-0.53205	-0.10303	0.018803	-0.87299	-0.86689	0	-0.19563	-0.6236	-0.77931	-0.4064	-0.65398	-0.67747	-0.62137	-0.34021	-0.82756	-0.49336	-0.39608	-0.012438	-0.24861	-0.00097017	-0.15477	-0.50619	-0.55407	-0.11813	-0.0048461	-0.83664	0	0.05459	0.1432	-0.78159	-0.18207	0.10964	-0.42674	-0.2233	-0.53764	-0.26156	0.54095	-0.36635	0.50116	-0.95901	0.010424	-0.84841	-1.2929	-0.045128	-0.46557	-0.9622	-0.01904	-0.70379	-0.36906	-0.56888	0.015727	-0.63064	-1.0236	
Deletion Peak  6 - CN values	6q22.31 	chr6:97531677-171115067(probes 623467:666867)      	chr6:124105198-125149024(probes 638573:639214)    	chr6:98790549-171115067(probes 624127:666867)      	0.010546	    0.16997		Actual Copy Change Given	-0.61431	0.027076	-0.0088526	-0.0020379	-0.53338	-0.43761	-0.92518	-0.094856	-0.43594	-0.53205	-0.10303	0.018803	-0.87299	-0.86689	0	-0.19563	-0.63953	-0.77931	-0.4064	-0.65398	-0.68095	-0.62137	-0.34389	-0.82756	-0.49154	-0.39608	-0.012438	-0.24861	-0.00097017	-0.15477	-0.50619	-0.55407	-0.11813	-0.0048461	-0.83664	0	0.05459	0.1432	-0.78159	-0.18207	0.10964	-0.42674	-0.2233	-0.54229	-0.26156	-0.56321	-0.36635	0.50116	-0.95901	0.010424	-0.84841	-0.68241	-0.045128	-0.46557	0.011584	-0.01904	-0.70379	-0.41166	-0.56888	0.57755	-0.63064	-1.0236	
Deletion Peak  7 - CN values	6q26    	chr6:152422456-171115067(probes 656407:666867)    	chr6:161767520-163153207(probes 662487:663097)    	chr6:98790549-171115067(probes 624127:666867)      	0.0028011	   0.024893		Actual Copy Change Given	-0.62703	0.02511	-0.0088526	-0.0020379	-0.53338	-0.43761	-0.92518	-0.094856	-0.43665	-0.53205	-0.10303	0.018803	-0.88962	-0.87984	0.044357	-0.57546	-0.6897	-1.075	-0.4064	-0.65398	-0.68095	-0.62137	-0.37988	-0.82756	-0.49154	-0.39608	-0.0089906	-0.24861	-0.00097017	-0.15652	-0.50619	-0.55407	-0.12503	0.017544	-0.83664	-0.0034127	0.05459	0.1432	-0.78159	-0.18207	0.10964	-0.42674	-0.2233	-0.54229	-0.26023	-0.60529	-0.37375	0.48889	-0.95901	0.010424	-0.8457	-0.67477	-0.03681	-0.47258	0.011584	-0.021615	-0.71337	-0.37471	-0.57602	-0.66439	-0.63064	-1.0236	
Deletion Peak  8 - CN values	7q31.1  	chr7:45950030-129080432(probes 692887:732670)      	chr7:110236682-111354928(probes 722989:723268)    	chr7:100317466-113530050(probes 717719:724294)    	0.16884	    0.15867		Actual Copy Change Given	1.0706	0.024308	-0.00027724	-0.0059522	0.15502	-0.003063	0.77707	1.1626	0.388	-0.0023553	-0.021647	0	0.00055459	-0.87479	0.015653	0.0043021	-0.017116	0.014749	-0.027398	0.0072217	0.031295	0.070582	-0.0020784	0.08322	-0.44224	0.0020805	0.0090312	0.2553	0.52731	-0.14294	0.34096	0.011649	-0.0020784	-0.0034102	-0.83325	-0.67916	0.097727	-0.0058646	0.033267	0.67678	0.032273	-0.41379	-0.12304	-0.0023553	0.25183	-0.00059897	-0.0095426	-0.0087959	0.059443	0.0081959	-0.00027724	0.0065262	0.0051359	-0.45929	-0.14395	-0.0094811	0.16928	-0.15298	0.091081	-0.63292	0.72565	0.13356	
Deletion Peak  9 - CN values	9p23    	chr9:8310705-12693402(probes 834354:836096)          	chr9:8310705-10619051(probes 834354:835688)          	chr9:4966912-30010807(probes 832802:847863)          	2.2653e-06	   0.050898		Actual Copy Change Given	-1.2528	-0.51835	0.006109	0.013492	-0.52936	0.046139	-0.90757	-0.11678	-0.41124	-0.4607	-0.84939	-0.89538	0.58327	-0.86696	-0.4469	-0.21231	-1.2929	-0.78083	0.019083	-0.65329	-0.68424	-0.67248	-0.036401	0.020644	-0.54323	-0.38817	0.011958	-0.24423	-0.6039	-0.92047	-0.47986	-0.56992	-4.6223e-05	-1.2037	-0.83454	-0.6821	-0.14849	-0.72743	0.014888	-0.77363	-0.91522	-1.2929	-0.70576	-0.54623	-0.25926	-0.5747	-0.73099	0.40327	-0.94645	-0.46312	-0.85229	0.14438	-0.82252	-0.43702	0.010887	-0.0055375	-0.71221	-0.61997	-0.34015	-0.63169	0.0418	-1.0273	
Deletion Peak 10 - CN values	9p21.3  	chr9:21865498-21997722(probes 843249:843313)        	chr9:21959052-21997722(probes 843300:843313)        	chr9:4966912-30010807(probes 832802:847863)          	6.9278e-40	 7.1673e-38		Actual Copy Change Given	-1.2302	-1.0494	0.006109	0.013492	-1.098	0.046139	-0.89657	-0.1184	-0.41124	-0.4607	-1.2929	-1.2929	0.58578	-0.86696	-0.4469	-0.21231	-1.2929	-1.2929	-1.2929	-0.65329	-0.68424	-0.67248	-0.036401	0.020644	-1.2929	-0.38817	0.011958	-0.24423	-0.6039	-0.87072	-0.45929	-0.55837	-0.0049844	-0.56027	-1.2929	-1.2929	-0.14849	-0.71483	-0.76826	-0.76629	-0.91522	-0.99217	-0.70576	-1.0994	-0.25926	-0.54908	-0.7019	-1.2929	-1.2929	-0.92361	-0.83414	-1.2929	-1.2929	-0.92294	-0.95551	-0.0055375	-0.71221	-0.61133	-0.34015	-1.2929	0.0418	-1.0073	
Deletion Peak 11 - CN values	10p15.3 	chr10:1-857150(probes 897861:898006)                   	chr10:1-742144(probes 897861:897948)                   	chr10:1-781123(probes 897861:897976)                   	0.088271	   0.091503		Actual Copy Change Given	-0.63765	-0.51887	0	-0.0029091	0.067375	-0.18889	-0.0081624	-0.14025	0.0027745	-0.49401	-0.028821	-0.014421	-0.37426	-0.83424	0.028548	-0.17259	-0.70268	-0.12043	-0.043071	-0.70657	0	-0.67661	-0.047898	-0.16279	-0.61865	0.0020805	-0.72888	-0.00069303	-0.62798	-0.91957	-0.49216	-0.089699	0.0024969	-0.0042929	-0.0049844	0.003519	-0.93556	0.0052239	-0.015186	-0.095516	-0.36952	-0.38004	-1.2929	-0.0012473	-0.26625	-0.56249	-0.0026322	-0.73617	-1.2929	-0.4627	0.0094491	-0.17386	-0.84464	-0.017116	-0.0013418	-0.088242	-0.71844	0	-0.10349	-0.64311	-0.69102	-0.96803	
Deletion Peak 12 - CN values	10q23.31	chr10:89617158-90034038(probes 950066:950496)      	chr10:89617402-89735596(probes 950067:950255)      	chr10:89662107-89701031(probes 950133:950182)      	0.0024285	  0.0024285		Actual Copy Change Given	-0.58696	-0.51887	0	-0.0055341	-0.2463	-0.84038	-0.0081624	-0.12328	-0.039394	-0.45875	0.0024568	-0.0051931	-0.0088526	-0.82056	0.0195	-0.17259	-0.66235	-0.12219	-0.011749	0.0044411	0	-0.67661	-0.030813	-0.20235	-0.61865	-0.38694	-0.7139	-0.00069303	-0.60719	-0.83349	-0.68415	-0.56823	0.0024969	-0.55387	-1.2929	0.0064374	-0.44037	0.0052239	-0.00027724	0.63737	-0.37214	-0.38004	-0.40097	0.0041632	-0.25757	-0.54958	-0.0026322	-0.90737	-0.9629	-0.4627	0.022725	-0.17386	-0.82181	-0.017116	-0.0013418	-0.088242	-0.71844	0	-0.10349	-0.64311	-0.59818	-0.077078	
Deletion Peak 13 - CN values	11q24.2 	chr11:103906053-135006516(probes 1035872:1056050)	chr11:124617940-124635034(probes 1049615:1049621)	chr11:92784204-135006516(probes 1028847:1056050)  	1.1886e-08	 1.1886e-08		Actual Copy Change Given	-0.62029	-0.0016629	-0.43572	0	-0.51671	-0.44635	-0.925	-0.11874	-0.41146	-0.46078	-0.89263	0.0045093	-0.0060904	-0.015825	-0.43154	0.018943	-0.70019	-0.74681	-0.39852	-0.64968	-0.68843	0.033764	-0.037354	-0.38278	-0.56923	0.003191	-0.71791	-0.0049844	-0.051991	-0.006505	0.31354	-0.57682	-0.36431	-0.55987	0.0034687	-0.68274	-0.94999	-0.72384	-0.010784	-0.77124	-0.4033	-1.2929	0.38176	-0.0044312	-0.26095	-0.46699	-0.36771	-0.012576	-0.96067	-0.46812	-0.01396	-0.71399	-0.82277	-0.46408	-0.95968	-0.011749	-0.73582	-0.63578	-0.10217	-0.65155	-0.60516	-1.0499	
Deletion Peak 14 - CN values	12p12.3 	chr12:1-20169548(probes 1056051:1067090)             	chr12:16338433-16437394(probes 1064745:1064805)    	chr12:16368704-16401704(probes 1064768:1064789)    	0.078701	   0.078273		Actual Copy Change Given	1.6553	0	-0.0027888	-0.0011087	-0.24107	-0.17049	0	0.63446	-0.42833	-0.42396	-0.0047079	0.0137	-0.0047079	0.003191	-0.46456	-0.17107	-0.015329	-0.71069	-0.017666	0.018243	0.66604	0.7749	-0.020549	-0.3898	0.60951	-0.0044312	-0.0047079	0.0019418	-0.031018	0	-0.24168	0.48923	0.020203	0	-0.0053992	-0.0020283	-0.90616	-0.024575	0.0097276	-0.79369	-0.0090625	-0.38015	0.43289	0.0022158	0.0083351	0.051057	-0.0038779	-0.0034627	-0.95133	0.0062481	0.0043021	-0.08559	-0.012221	0.0073609	-0.0024498	-0.0037208	0.18844	-0.61422	0.090356	-0.029857	0.16655	0.078294	
Deletion Peak 15 - CN values	12q23.3 	chr12:74931350-133851895(probes 1095950:1130029)  	chr12:103976914-104163845(probes 1113872:1114033)	chr12:104068705-104073351(probes 1113953:1113954)	0.065123	   0.069066		Actual Copy Change Given	-0.62102	0.0065262	-0.00079963	-0.0011087	-0.15042	0.10871	-0.0043732	-0.11129	0.029747	-0.42484	-0.0008316	0.0137	-0.0047079	0.003191	-0.45955	-0.17107	-0.062509	-0.73258	-0.017666	-0.64416	0.0041632	-0.66335	-0.020549	-0.383	0.022413	-0.0044312	0.0066035	0.0019418	-0.017941	0	-0.24168	-0.5614	0.020203	0	-0.0083005	-0.0020283	0.021043	-0.025259	0.0097276	-0.14017	-0.0090625	-0.38933	-0.71479	0.0073609	-0.25067	0.052906	-0.0038779	-0.0034627	-0.95293	0.0086135	-0.0008316	-0.08559	0.01447	0.0073609	0.00087604	-0.0013858	-0.69767	-0.2642	0.085292	-0.040888	-0.59944	-0.88966	
Deletion Peak 16 - CN values	13q14.2 	chr13:1-115169878(probes 1130030:1186705)         	chr13:48984816-49108009(probes 1148797:1148901)    	chr13:48996547-48997006(probes 1148810:1148811)    	0.25058	    0.24281		Actual Copy Change Given	0.49588	-0.50049	-0.43637	-0.0076101	-0.51115	0.073772	0.016146	0.031489	-0.42079	-0.88704	0.71039	0.020236	-1.2929	0.0087528	0.024896	0.20003	-0.63784	-0.73608	2.8366	0.011958	-0.029175	0.042925	-0.02151	0.083793	0.97931	0.0049969	-0.72533	0.0077783	0.51525	0.66925	0.31338	0.00055459	0	-0.010508	0.13969	0.054077	0.045282	0.015256	0.018103	0.62715	0.010842	0.13168	0.35063	0.010703	0.23907	0.18384	0.32382	0.27947	0.038792	-0.0053992	0.5865	0.80292	0.79937	-0.00013862	0.91527	0.0076392	0.10074	0.31402	0.072898	0.50516	0.90009	0.46212	
Deletion Peak 17 - CN values	14q31.3 	chr14:72396248-107349540(probes 1215495:1236175)  	chr14:85994292-86099301(probes 1224324:1224407)    	chr14:77234219-107349540(probes 1218483:1236175)  	0.050898	   0.050898		Actual Copy Change Given	-0.59526	0.0058309	0.010842	-0.0059522	0.49891	-0.19655	-0.0066463	-0.12278	-0.42309	-0.46916	-0.0015243	-0.0024258	-0.0089906	0	0.019569	-0.17272	0.46041	0.0051359	-0.054016	0.024268	-0.70854	-1.2929	-0.032041	-0.26315	-0.54786	-0.007472	-0.73005	-0.0036011	0.40494	-0.0092666	-0.47649	-0.58559	-0.38179	-0.56724	0	0.0036579	0.040185	-0.66886	-0.0038779	-0.19737	0.024689	-0.38318	-0.7367	0.001803	-0.26336	-0.036581	-0.0059522	-0.0069195	0.0082712	0.0090312	0.0083351	0.071104	-0.0036011	-0.018902	-0.95903	0.23347	-0.59711	-0.27739	0.17833	0.51821	-0.60478	-0.94255	
Deletion Peak 18 - CN values	15q13.3 	chr15:1-54921359(probes 1236176:1252776)           	chr15:33044592-33361732(probes 1239514:1239779)    	chr15:1-50421829(probes 1236176:1249802)           	0.070916	   0.070916		Actual Copy Change Given	-0.57881	0.01433	-0.43025	-0.043217	0.025513	0.076793	-0.90069	0.63883	-0.40893	-0.46664	0.024969	-0.0050548	-0.015996	-0.010094	0.0056505	-0.031905	-0.41135	-0.12082	0.0051359	0.0065262	0.0066653	0.10211	0.32495	0.080162	-0.53715	-0.0073339	-0.0030475	0.00083195	0.46981	-0.0048461	-0.48155	-0.022469	-0.10026	-0.56157	-0.0085766	-0.031992	-0.24582	-0.047851	-0.032723	-0.22047	0.02511	-0.36911	0.44833	-0.0098185	-0.26227	-0.0092259	0.010982	-0.005261	-0.12564	0.0066653	-0.0024938	-0.3126	0.75834	0.010703	-0.96184	-0.0048461	0.046133	0.079591	6.7691e-05	0.5142	-0.59964	-0.046718	
Deletion Peak 19 - CN values	16p13.3 	chr16:5144019-7771745(probes 1282392:1283891)        	chr16:6066397-7771745(probes 1283029:1283891)        	chr16:7369731-7376241(probes 1283461:1283462)        	0.025352	   0.024893		Actual Copy Change Given	-0.021328	-0.015604	-0.022744	0.029888	-0.27105	-0.20366	-0.0030475	-0.034522	-0.006505	0.039478	0.74765	-0.0434	-0.019177	-0.018628	0.043507	0.031436	-0.15554	-0.017391	0.56917	-0.013953	-0.042302	-0.61821	0.18761	-0.0048251	1.2918	-0.0040162	-0.0036011	0.0098669	0.35463	0.71716	-0.025756	-0.60738	-0.0089906	0.0094491	0.011261	0.01159	-0.26035	0.019731	-0.045916	0.43564	0.041881	-0.32999	-0.70657	-0.022744	0.21883	0.49225	0.49422	-0.0040162	-0.0073973	0	0.015168	-0.20199	0.023847	-0.046989	0.011444	0.75242	0	-0.29815	-0.19469	0.54841	-1.046	0.040609	
Deletion Peak 20 - CN values	16q23.3 	chr16:68265240-90354753(probes 1308436:1321540)    	chr16:82658729-83830499(probes 1317829:1318951)    	chr16:82460190-83217258(probes 1317563:1318192)    	0.16472	    0.15867		Actual Copy Change Given	-0.019081	-0.015604	-0.05918	0.029888	-0.52951	-0.20366	-0.0011495	-0.0069295	-0.006505	0.037466	0.035794	-0.0434	-0.019177	-0.89152	-0.97983	0.031436	-0.084262	-0.017391	0.56917	-0.014366	0.55142	-0.66343	0.15286	-0.0020572	-0.54343	-0.0040162	-0.0039779	0.0098669	0.38753	0.0076955	-0.46589	-0.018765	-0.0089906	-0.51969	0.011261	0.01159	-0.26035	0.050198	-0.065984	0.43817	0.030873	-0.36056	-0.70657	-0.021373	0.05466	0.52813	-0.2201	-0.76604	0.049313	0	0.015168	-0.2005	0.023847	-0.47638	0.011444	-0.63547	0	-0.2888	-0.19469	0.54841	-0.6104	-1.025	
Deletion Peak 21 - CN values	21q11.2 	chr21:1-22117102(probes 1462493:1466744)           	chr21:15474707-15580753(probes 1462536:1462584)    	chr21:15516331-15518204(probes 1462561:1462562)    	0.12244	    0.12731		Actual Copy Change Given	-0.014503	0.0013868	-0.0026322	-0.0089906	-0.23704	-0.41909	0.004719	0.55072	0.026373	-0.0044312	0.74803	-0.015399	0.53257	-0.00069303	0.026159	-0.17132	0.63627	-0.11404	0.58095	-0.023018	-0.86397	-0.20243	0.4932	-0.8668	0.64264	0	0.031577	0.011818	0.49874	0.63609	-0.053071	-0.017391	-0.017297	-0.041159	-0.031496	0.0086639	-0.036231	-0.42531	0.027778	0.58381	0.015866	-0.37948	0.65921	-0.55056	0.0022193	0.51903	-0.0066432	-0.023703	-0.0082258	-0.0024938	-0.0092666	-0.05752	-0.017803	-0.022606	-0.96299	0.0041632	-0.90995	-0.26769	-0.27769	-0.022744	0.085799	-0.81005	
