Broad GDAC Analyses Status
awg_thca__2013_08_08 Run for Tumor Type: THCA
Note that the links below require Broad internal Firehose login credentials.
Pipeline
NotRunnable
Runnable
InProcess
Successful
Unsuccessful
1
Add_CustomClinical
0
0
0
1
0
2
Add_CustomEvents
0
0
0
1
0
3
Aggregate_Gene_Status
0
0
0
1
0
4
Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
5
CoMut1.5
0
0
0
1
0
6
CoMut2.0
0
0
0
1
0
7
CoMutCV
0
0
0
1
0
8
CoMutMerged
0
0
0
1
0
9
CopyNumber_Clustering_CNMF
0
0
0
1
0
10
CopyNumber_Clustering_CNMF_armlevel
0
0
0
1
0
11
CopyNumber_Gistic2
0
0
0
1
0
12
CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
13
Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
14
Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
15
Correlate_Clinical_vs_CustomEvents
0
0
0
1
0
16
Correlate_Clinical_vs_Methylation
0
0
0
1
0
17
Correlate_Clinical_vs_miR
1
0
0
0
0
18
Correlate_Clinical_vs_miRseq
0
0
0
1
0
19
Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
20
Correlate_Clinical_vs_mRNA
1
0
0
0
0
21
Correlate_Clinical_vs_mRNAseq
0
0
0
1
0
22
Correlate_Clinical_vs_Mutation
0
0
0
1
0
23
Correlate_Clinical_vs_RPPA
0
0
0
1
0
24
Correlate_CopyNumber_vs_miR
1
0
0
0
0
25
Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
26
Correlate_CopyNumber_vs_mRNAseq
0
0
0
1
0
27
Correlate_CustomClinical_vs_CopyNumber_Arm
0
0
0
1
0
28
Correlate_CustomClinical_vs_CopyNumber_Focal
0
0
0
1
0
29
Correlate_CustomClinical_vs_CustomEvents
0
0
0
1
0
30
Correlate_CustomClinical_vs_Methylation
0
0
0
1
0
31
Correlate_CustomClinical_vs_miRseq
0
0
0
1
0
32
Correlate_CustomClinical_vs_Molecular_Subtypes
0
0
0
1
0
33
Correlate_CustomClinical_vs_mRNAseq
0
0
0
1
0
34
Correlate_CustomClinical_vs_Mutation
0
0
0
1
0
35
Correlate_CustomClinical_vs_RPPA
0
0
0
1
0
36
Correlate_Methylation_vs_mRNA
0
0
0
1
0
37
Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
38
Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
39
Correlate_molecularSubtype_vs_Mutation
0
0
0
1
0
40
expanded_coMutPlot
0
0
0
0
1
41
GenerateStickFigures1.5
0
0
0
1
0
42
GenerateStickFigures2.0
0
0
0
1
0
43
GenerateStickFiguresCV
0
0
0
1
0
44
GenerateStickFiguresMerged
0
0
0
1
0
45
LegoPlotter1.5
0
0
0
1
0
46
LegoPlotter2.0
0
0
0
1
0
47
LegoPlotterCV
0
0
0
1
0
48
LegoPlotterMerged
0
0
0
1
0
49
MergeMutSigRunResults
0
0
0
1
0
50
Methylation_Clustering_CNMF
0
0
0
1
0
51
Methylation_Preprocess
0
0
0
1
0
52
miRseq_Clustering_CNMF
0
0
0
1
0
53
miRseq_Clustering_Consensus
0
0
0
1
0
54
miRseq_Mature_Clustering_CNMF
0
0
0
1
0
55
miRseq_Mature_Clustering_Consensus
0
0
0
1
0
56
miRseq_Mature_Preprocess
0
0
0
1
0
57
miRseq_Preprocess
0
0
0
1
0
58
miR_Clustering_CNMF
1
0
0
0
0
59
miR_Clustering_Consensus
1
0
0
0
0
60
miR_FindDirectTargets
1
0
0
0
0
61
mRNAseq_Clustering_CNMF
0
0
0
1
0
62
mRNAseq_Clustering_Consensus
0
0
0
1
0
63
mRNA_Clustering_CNMF
1
0
0
0
0
64
mRNA_Clustering_Consensus
1
0
0
0
0
65
mRNA_Preprocess_Median
1
0
0
0
0
66
Mutation_Assessor
0
0
0
1
0
67
MutSigNozzleReport1.5
0
0
0
1
0
68
MutSigNozzleReport2.0
0
0
0
1
0
69
MutSigNozzleReportCV
0
0
0
1
0
70
MutSigNozzleReportMerged
0
0
0
1
0
71
MutSigPreprocess1.5
0
0
0
1
0
72
MutSigPreprocess2.0
0
0
0
1
0
73
MutSigRun1.5
0
0
0
1
0
74
MutSigRun2.0
0
0
0
1
0
75
MutSigRunCV
0
0
0
1
0
76
ParadigmPreprocess_mRNA
1
0
0
0
0
77
ParadigmPreprocess_RNASeq
0
0
0
1
0
78
Paradigm_mRNA
1
0
0
0
0
79
Paradigm_mRNA_And_CopyNumber
1
0
0
0
0
80
Paradigm_Prepare_mRNA
1
0
0
0
0
81
Paradigm_Prepare_mRNA_And_Copy_Number
1
0
0
0
0
82
Paradigm_Prepare_RNASeq
0
0
0
1
0
83
Paradigm_Prepare_RNASeq_And_Copy_Number
0
0
0
1
0
84
Paradigm_Preprocess_mRNA
1
0
0
0
0
85
Paradigm_Preprocess_mRNA_And_Copy_Number
1
0
0
0
0
86
Paradigm_Preprocess_RNASeq
0
0
0
1
0
87
Paradigm_Preprocess_RNASeq_And_Copy_Number
0
0
0
1
0
88
Paradigm_Report_Preprocess_mRNA
1
0
0
0
0
89
Paradigm_Report_Preprocess_mRNA_And_CopyNumber
1
0
0
0
0
90
Paradigm_Report_Preprocess_RNASeq
0
0
0
1
0
91
Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
0
0
0
1
0
92
Paradigm_RNASeq
0
0
0
1
0
93
Paradigm_RNASeq_And_Copy_Number
0
0
0
1
0
94
Pathway_FindEnrichedGenes
1
0
0
0
0
95
Pathway_Hotnet
0
0
0
1
0
96
Pathway_Paradigm_mRNA
1
0
0
0
0
97
Pathway_Paradigm_mRNA_And_Copy_Number
1
0
0
0
0
98
Pathway_Paradigm_RNASeq
0
0
0
1
0
99
Pathway_Paradigm_RNASeq_And_Copy_Number
0
0
0
1
0
100
ProcessCoverageForMutSig1.5
0
0
0
1
0
101
ProcessCoverageForMutSig2.0
0
0
0
1
0
102
RPPA_Clustering_CNMF
0
0
0
1
0
103
RPPA_Clustering_Consensus
0
0
0
1
0
104
Clinical_Pick_Tier1
0
0
0
1
0
105
CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
1
0
0
0
0
106
CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
1
0
0
0
0
107
CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
1
0
0
0
0
108
CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
1
0
0
0
0
109
CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
1
0
0
0
0
110
CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
1
0
0
0
0
111
CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
1
0
0
0
0
112
CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
1
0
0
0
0
113
CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
1
0
0
0
0
114
CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
1
0
0
0
0
115
Merge_Clinical
0
0
0
1
0
116
Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data
1
0
0
0
0
117
Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
118
Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data
1
0
0
0
0
119
Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
120
Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data
1
0
0
0
0
121
Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
122
Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data
1
0
0
0
0
123
Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
124
Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
0
0
0
1
0
125
Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
1
0
0
0
0
126
Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
1
0
0
0
0
127
Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
1
0
0
0
0
128
Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
1
0
0
0
0
129
Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
1
0
0
0
0
130
Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
131
Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
1
0
0
0
0
132
Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
1
0
0
0
0
133
Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
1
0
0
0
0
134
Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
135
Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
136
Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data
1
0
0
0
0
137
Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
138
Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data
1
0
0
0
0
139
Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
140
Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
0
0
0
1
0
141
Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
142
Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
143
Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
144
Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
145
Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
146
Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
0
0
0
1
0
147
Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
0
0
0
1
0
148
Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
0
0
0
1
0
149
Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
0
0
0
1
0
150
Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
0
0
0
1
0
151
Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
152
Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
153
Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
154
Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
155
Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
156
Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
157
Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
158
Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
159
Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
160
Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
0
0
0
1
0
161
Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data
0
0
0
1
0
162
Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data
0
0
0
1
0
163
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data
1
0
0
0
0
164
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
0
0
0
1
0
165
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data
1
0
0
0
0
166
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data
1
0
0
0
0
167
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data
1
0
0
0
0
168
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data
1
0
0
0
0
169
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg
0
0
0
1
0
170
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
0
0
0
1
0
171
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
0
0
0
1
0
172
Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg
0
0
0
1
0
173
Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data
1
0
0
0
0
174
Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data
1
0
0
0
0
175
Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
1
0
0
0
0
176
Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data
1
0
0
0
0
177
Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data
1
0
0
0
0
178
Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data
1
0
0
0
0
179
Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data
1
0
0
0
0
180
Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
181
Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
182
Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
183
Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data
1
0
0
0
0
184
Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data
1
0
0
0
0
185
Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
1
0
0
0
0
186
Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data
1
0
0
0
0
187
Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data
1
0
0
0
0
188
Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data
1
0
0
0
0
189
Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data
1
0
0
0
0
190
Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
191
Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
192
Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
193
Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
194
Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
195
Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
196
Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
197
Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
198
Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
199
Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data
1
0
0
0
0
200
Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
1
0
0
0
0
201
mRNAseq_Preprocess
0
0
0
1
0
202
Mutation_Packager_Calls
0
0
0
1
0
203
Mutation_Packager_Coverage
0
0
0
1
0
204
RPPA_AnnotateWithGene
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TP_NON_HistologicalType_Other-Add_CustomClinical
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TP_NON_HistologicalType_Other-Add_CustomEvents
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TP_NON_HistologicalType_Other-Aggregate_Gene_Status
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208
TP_NON_HistologicalType_Other-Aggregate_Molecular_Subtype_Clusters
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TP_NON_HistologicalType_Other-CoMut1.5
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TP_NON_HistologicalType_Other-CoMut2.0
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TP_NON_HistologicalType_Other-CoMutCV
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TP_NON_HistologicalType_Other-CoMutMerged
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TP_NON_HistologicalType_Other-CopyNumber_Clustering_CNMF
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TP_NON_HistologicalType_Other-CopyNumber_Clustering_CNMF_armlevel
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TP_NON_HistologicalType_Other-CopyNumber_Gistic2
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TP_NON_HistologicalType_Other-CopyNumber_Gistic2_Postprocess_Focal
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TP_NON_HistologicalType_Other-Correlate_Clinical_vs_CopyNumber_Arm
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TP_NON_HistologicalType_Other-Correlate_Clinical_vs_CopyNumber_Focal
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TP_NON_HistologicalType_Other-Correlate_Clinical_vs_CustomEvents
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TP_NON_HistologicalType_Other-Correlate_Clinical_vs_Methylation
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221
TP_NON_HistologicalType_Other-Correlate_Clinical_vs_miR
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222
TP_NON_HistologicalType_Other-Correlate_Clinical_vs_miRseq
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TP_NON_HistologicalType_Other-Correlate_Clinical_vs_Molecular_Subtypes
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TP_NON_HistologicalType_Other-Correlate_Clinical_vs_mRNA
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TP_NON_HistologicalType_Other-Correlate_Clinical_vs_mRNAseq
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TP_NON_HistologicalType_Other-Correlate_Clinical_vs_Mutation
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TP_NON_HistologicalType_Other-Correlate_Clinical_vs_RPPA
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TP_NON_HistologicalType_Other-Correlate_CopyNumber_vs_miR
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TP_NON_HistologicalType_Other-Correlate_CopyNumber_vs_mRNA
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TP_NON_HistologicalType_Other-Correlate_CopyNumber_vs_mRNAseq
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TP_NON_HistologicalType_Other-Correlate_CustomClinical_vs_CopyNumber_Arm
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TP_NON_HistologicalType_Other-Correlate_CustomClinical_vs_CopyNumber_Focal
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TP_NON_HistologicalType_Other-Correlate_CustomClinical_vs_CustomEvents
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TP_NON_HistologicalType_Other-Correlate_CustomClinical_vs_Methylation
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TP_NON_HistologicalType_Other-Correlate_CustomClinical_vs_miRseq
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TP_NON_HistologicalType_Other-Correlate_CustomClinical_vs_Molecular_Subtypes
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TP_NON_HistologicalType_Other-Correlate_CustomClinical_vs_mRNAseq
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TP_NON_HistologicalType_Other-Correlate_CustomClinical_vs_Mutation
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TP_NON_HistologicalType_Other-Correlate_CustomClinical_vs_RPPA
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240
TP_NON_HistologicalType_Other-Correlate_Methylation_vs_mRNA
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TP_NON_HistologicalType_Other-Correlate_molecularSubtype_vs_CopyNumber_Arm
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TP_NON_HistologicalType_Other-Correlate_molecularSubtype_vs_CopyNumber_Focal
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TP_NON_HistologicalType_Other-Correlate_molecularSubtype_vs_Mutation
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TP_NON_HistologicalType_Other-expanded_coMutPlot
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TP_NON_HistologicalType_Other-GenerateStickFigures1.5
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TP_NON_HistologicalType_Other-GenerateStickFigures2.0
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TP_NON_HistologicalType_Other-GenerateStickFiguresCV
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TP_NON_HistologicalType_Other-GenerateStickFiguresMerged
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TP_NON_HistologicalType_Other-LegoPlotter1.5
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TP_NON_HistologicalType_Other-LegoPlotter2.0
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TP_NON_HistologicalType_Other-LegoPlotterCV
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TP_NON_HistologicalType_Other-LegoPlotterMerged
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TP_NON_HistologicalType_Other-MergeMutSigRunResults
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TP_NON_HistologicalType_Other-Methylation_Clustering_CNMF
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TP_NON_HistologicalType_Other-Methylation_Preprocess
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TP_NON_HistologicalType_Other-miRseq_Clustering_CNMF
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TP_NON_HistologicalType_Other-miRseq_Clustering_Consensus
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TP_NON_HistologicalType_Other-miRseq_Mature_Clustering_CNMF
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TP_NON_HistologicalType_Other-miRseq_Mature_Clustering_Consensus
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260
TP_NON_HistologicalType_Other-miRseq_Mature_Preprocess
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TP_NON_HistologicalType_Other-miRseq_Preprocess
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262
TP_NON_HistologicalType_Other-miR_Clustering_CNMF
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TP_NON_HistologicalType_Other-miR_Clustering_Consensus
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TP_NON_HistologicalType_Other-miR_FindDirectTargets
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TP_NON_HistologicalType_Other-mRNAseq_Clustering_CNMF
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TP_NON_HistologicalType_Other-mRNAseq_Clustering_Consensus
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TP_NON_HistologicalType_Other-mRNA_Clustering_CNMF
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TP_NON_HistologicalType_Other-mRNA_Clustering_Consensus
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TP_NON_HistologicalType_Other-mRNA_Preprocess_Median
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TP_NON_HistologicalType_Other-Mutation_Assessor
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TP_NON_HistologicalType_Other-MutSigNozzleReport1.5
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272
TP_NON_HistologicalType_Other-MutSigNozzleReport2.0
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TP_NON_HistologicalType_Other-MutSigNozzleReportCV
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TP_NON_HistologicalType_Other-MutSigNozzleReportMerged
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TP_NON_HistologicalType_Other-MutSigPreprocess1.5
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276
TP_NON_HistologicalType_Other-MutSigPreprocess2.0
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TP_NON_HistologicalType_Other-MutSigRun1.5
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278
TP_NON_HistologicalType_Other-MutSigRun2.0
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TP_NON_HistologicalType_Other-MutSigRunCV
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280
TP_NON_HistologicalType_Other-ParadigmPreprocess_mRNA
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281
TP_NON_HistologicalType_Other-ParadigmPreprocess_RNASeq
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TP_NON_HistologicalType_Other-Paradigm_mRNA
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TP_NON_HistologicalType_Other-Paradigm_mRNA_And_CopyNumber
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TP_NON_HistologicalType_Other-Paradigm_Prepare_mRNA
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TP_NON_HistologicalType_Other-Paradigm_Prepare_mRNA_And_Copy_Number
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TP_NON_HistologicalType_Other-Paradigm_Prepare_RNASeq
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TP_NON_HistologicalType_Other-Paradigm_Preprocess_mRNA
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TP_NON_HistologicalType_Other-Paradigm_Preprocess_mRNA_And_Copy_Number
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TP_NON_HistologicalType_Other-Paradigm_Report_Preprocess_mRNA
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TP_NON_HistologicalType_Other-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
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TP_NON_HistologicalType_Other-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
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TP_NON_HistologicalType_Other-Pathway_Hotnet
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TP_NON_HistologicalType_Other-Pathway_Paradigm_mRNA_And_Copy_Number
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TP_NON_HistologicalType_Other-ProcessCoverageForMutSig2.0
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TP_NON_HistologicalType_Other-Clinical_Pick_Tier1
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NT-miRseq_Mature_Clustering_Consensus
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NT-miRseq_Mature_Preprocess
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NT-miRseq_Preprocess
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NT-miR_Clustering_CNMF
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NT-miR_Clustering_Consensus
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NT-miR_FindDirectTargets
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NT-mRNAseq_Clustering_CNMF
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NT-mRNAseq_Clustering_Consensus
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NT-mRNA_Clustering_CNMF
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NT-mRNA_Clustering_Consensus
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NT-mRNA_Preprocess_Median
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NT-Mutation_Assessor
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NT-MutSigNozzleReport1.5
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NT-MutSigNozzleReport2.0
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NT-MutSigNozzleReportCV
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NT-MutSigNozzleReportMerged
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NT-MutSigPreprocess1.5
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NT-MutSigPreprocess2.0
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NT-MutSigRun1.5
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NT-MutSigRun2.0
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NT-MutSigRunCV
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NT-Paradigm_mRNA_And_CopyNumber
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NT-Paradigm_Prepare_mRNA_And_Copy_Number
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NT-Paradigm_Preprocess_RNASeq_And_Copy_Number
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NT-Paradigm_Report_Preprocess_mRNA
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NT-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
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NT-Paradigm_Report_Preprocess_RNASeq
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NT-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
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NT-Paradigm_RNASeq_And_Copy_Number
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NT-Pathway_FindEnrichedGenes
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NT-Pathway_Hotnet
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NT-Pathway_Paradigm_mRNA
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NT-Pathway_Paradigm_mRNA_And_Copy_Number
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NT-Pathway_Paradigm_RNASeq_And_Copy_Number
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NT-ProcessCoverageForMutSig2.0
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NT-RPPA_Clustering_CNMF
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NT-RPPA_Clustering_Consensus
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NT-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
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NT-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
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NT-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
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NT-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
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NT-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
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NT-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
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NT-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
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NT-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
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NT-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
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NT-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
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NT-Merge_Clinical
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NT-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
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NT-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
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NT-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data
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NT-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
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NT-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data
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NT-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
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NT-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
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NT-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
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NT-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
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NT-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
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NT-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
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NT-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
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NT-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
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NT-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
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NT-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
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NT-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
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NT-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
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NT-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data
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NT-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
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NT-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data
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NT-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
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NT-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
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NT-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
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NT-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
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NT-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
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NT-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
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NT-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
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NT-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
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NT-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
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NT-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
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NT-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
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NT-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
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NT-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
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NT-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
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NT-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
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NT-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
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NT-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
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NT-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
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NT-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
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NT-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
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NT-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
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NT-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data
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NT-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
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NT-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
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NT-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
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NT-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
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NT-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
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NT-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
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NT-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
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NT-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
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NT-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
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NT-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
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NT-mRNAseq_Preprocess
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NT-Mutation_Packager_Calls
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NT-Mutation_Packager_Coverage
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1632
NT-RPPA_AnnotateWithGene
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NB-Add_CustomClinical
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NB-Add_CustomEvents
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NB-Aggregate_Gene_Status
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NB-Aggregate_Molecular_Subtype_Clusters
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NB-CoMut1.5
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NB-CoMutMerged
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NB-CopyNumber_Clustering_CNMF
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NB-CopyNumber_Clustering_CNMF_armlevel
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NB-CopyNumber_Gistic2
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NB-CopyNumber_Gistic2_Postprocess_Focal
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NB-Correlate_Clinical_vs_CopyNumber_Arm
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NB-Correlate_Clinical_vs_CopyNumber_Focal
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NB-Correlate_Clinical_vs_CustomEvents
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NB-Correlate_Clinical_vs_Methylation
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NB-Correlate_Clinical_vs_miR
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NB-Correlate_Clinical_vs_miRseq
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NB-Correlate_Clinical_vs_Molecular_Subtypes
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NB-Correlate_Clinical_vs_mRNA
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NB-Correlate_Clinical_vs_mRNAseq
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NB-Correlate_Clinical_vs_Mutation
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NB-Correlate_Clinical_vs_RPPA
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NB-Correlate_CopyNumber_vs_miR
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NB-Correlate_CopyNumber_vs_mRNA
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NB-Correlate_CopyNumber_vs_mRNAseq
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NB-Correlate_CustomClinical_vs_CopyNumber_Arm
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NB-Correlate_CustomClinical_vs_CopyNumber_Focal
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NB-Correlate_CustomClinical_vs_CustomEvents
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NB-Correlate_CustomClinical_vs_Methylation
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NB-Correlate_CustomClinical_vs_miRseq
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1664
NB-Correlate_CustomClinical_vs_Molecular_Subtypes
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NB-Correlate_CustomClinical_vs_mRNAseq
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NB-Correlate_CustomClinical_vs_Mutation
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NB-Correlate_CustomClinical_vs_RPPA
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NB-Correlate_Methylation_vs_mRNA
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1669
NB-Correlate_molecularSubtype_vs_CopyNumber_Arm
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NB-Correlate_molecularSubtype_vs_CopyNumber_Focal
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NB-Correlate_molecularSubtype_vs_Mutation
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NB-expanded_coMutPlot
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NB-GenerateStickFigures1.5
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NB-MergeMutSigRunResults
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NB-miRseq_Clustering_Consensus
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NB-miRseq_Mature_Clustering_Consensus
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NB-miRseq_Mature_Preprocess
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NB-miR_Clustering_Consensus
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NB-miR_FindDirectTargets
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NB-mRNAseq_Clustering_CNMF
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NB-MutSigNozzleReport2.0
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NB-ParadigmPreprocess_RNASeq
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NB-Paradigm_mRNA_And_CopyNumber
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NB-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
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NB-Pathway_FindEnrichedGenes
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NB-Pathway_Hotnet
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NB-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
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NB-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
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NB-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data
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NB-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
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NB-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
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NB-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
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NB-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data
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NB-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
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NB-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
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NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
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NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
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NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
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NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
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0
1855
Mut_RAS-Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
1856
Mut_RAS-Correlate_Clinical_vs_mRNA
1
0
0
0
0
1857
Mut_RAS-Correlate_Clinical_vs_mRNAseq
0
0
0
1
0
1858
Mut_RAS-Correlate_Clinical_vs_Mutation
0
0
0
1
0
1859
Mut_RAS-Correlate_Clinical_vs_RPPA
0
0
0
1
0
1860
Mut_RAS-Correlate_CopyNumber_vs_miR
1
0
0
0
0
1861
Mut_RAS-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
1862
Mut_RAS-Correlate_CopyNumber_vs_mRNAseq
0
0
0
1
0
1863
Mut_RAS-Correlate_CustomClinical_vs_CopyNumber_Arm
1
0
0
0
0
1864
Mut_RAS-Correlate_CustomClinical_vs_CopyNumber_Focal
1
0
0
0
0
1865
Mut_RAS-Correlate_CustomClinical_vs_CustomEvents
1
0
0
0
0
1866
Mut_RAS-Correlate_CustomClinical_vs_Methylation
1
0
0
0
0
1867
Mut_RAS-Correlate_CustomClinical_vs_miRseq
1
0
0
0
0
1868
Mut_RAS-Correlate_CustomClinical_vs_Molecular_Subtypes
1
0
0
0
0
1869
Mut_RAS-Correlate_CustomClinical_vs_mRNAseq
1
0
0
0
0
1870
Mut_RAS-Correlate_CustomClinical_vs_Mutation
1
0
0
0
0
1871
Mut_RAS-Correlate_CustomClinical_vs_RPPA
1
0
0
0
0
1872
Mut_RAS-Correlate_Methylation_vs_mRNA
0
0
0
1
0
1873
Mut_RAS-Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
1874
Mut_RAS-Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
0
1
1875
Mut_RAS-Correlate_molecularSubtype_vs_Mutation
0
0
0
1
0
1876
Mut_RAS-expanded_coMutPlot
0
0
0
0
1
1877
Mut_RAS-GenerateStickFigures1.5
0
0
0
1
0
1878
Mut_RAS-GenerateStickFigures2.0
0
0
0
1
0
1879
Mut_RAS-GenerateStickFiguresCV
0
0
0
1
0
1880
Mut_RAS-GenerateStickFiguresMerged
0
0
0
1
0
1881
Mut_RAS-LegoPlotter1.5
0
0
0
1
0
1882
Mut_RAS-LegoPlotter2.0
0
0
0
1
0
1883
Mut_RAS-LegoPlotterCV
0
0
0
1
0
1884
Mut_RAS-LegoPlotterMerged
0
0
0
1
0
1885
Mut_RAS-MergeMutSigRunResults
0
0
0
1
0
1886
Mut_RAS-Methylation_Clustering_CNMF
0
0
0
1
0
1887
Mut_RAS-Methylation_Preprocess
0
0
0
1
0
1888
Mut_RAS-miRseq_Clustering_CNMF
0
0
0
1
0
1889
Mut_RAS-miRseq_Clustering_Consensus
0
0
0
1
0
1890
Mut_RAS-miRseq_Mature_Clustering_CNMF
0
0
0
1
0
1891
Mut_RAS-miRseq_Mature_Clustering_Consensus
0
0
0
1
0
1892
Mut_RAS-miRseq_Mature_Preprocess
0
0
0
1
0
1893
Mut_RAS-miRseq_Preprocess
0
0
0
1
0
1894
Mut_RAS-miR_Clustering_CNMF
1
0
0
0
0
1895
Mut_RAS-miR_Clustering_Consensus
1
0
0
0
0
1896
Mut_RAS-miR_FindDirectTargets
1
0
0
0
0
1897
Mut_RAS-mRNAseq_Clustering_CNMF
0
0
0
1
0
1898
Mut_RAS-mRNAseq_Clustering_Consensus
0
0
0
1
0
1899
Mut_RAS-mRNA_Clustering_CNMF
1
0
0
0
0
1900
Mut_RAS-mRNA_Clustering_Consensus
1
0
0
0
0
1901
Mut_RAS-mRNA_Preprocess_Median
1
0
0
0
0
1902
Mut_RAS-Mutation_Assessor
0
0
0
1
0
1903
Mut_RAS-MutSigNozzleReport1.5
0
0
0
1
0
1904
Mut_RAS-MutSigNozzleReport2.0
0
0
0
1
0
1905
Mut_RAS-MutSigNozzleReportCV
0
0
0
1
0
1906
Mut_RAS-MutSigNozzleReportMerged
0
0
0
1
0
1907
Mut_RAS-MutSigPreprocess1.5
0
0
0
1
0
1908
Mut_RAS-MutSigPreprocess2.0
0
0
0
1
0
1909
Mut_RAS-MutSigRun1.5
0
0
0
1
0
1910
Mut_RAS-MutSigRun2.0
0
0
0
1
0
1911
Mut_RAS-MutSigRunCV
0
0
0
1
0
1912
Mut_RAS-ParadigmPreprocess_mRNA
1
0
0
0
0
1913
Mut_RAS-ParadigmPreprocess_RNASeq
0
0
0
1
0
1914
Mut_RAS-Paradigm_mRNA
1
0
0
0
0
1915
Mut_RAS-Paradigm_mRNA_And_CopyNumber
1
0
0
0
0
1916
Mut_RAS-Paradigm_Prepare_mRNA
1
0
0
0
0
1917
Mut_RAS-Paradigm_Prepare_mRNA_And_Copy_Number
1
0
0
0
0
1918
Mut_RAS-Paradigm_Prepare_RNASeq
0
0
0
1
0
1919
Mut_RAS-Paradigm_Prepare_RNASeq_And_Copy_Number
0
0
0
1
0
1920
Mut_RAS-Paradigm_Preprocess_mRNA
1
0
0
0
0
1921
Mut_RAS-Paradigm_Preprocess_mRNA_And_Copy_Number
1
0
0
0
0
1922
Mut_RAS-Paradigm_Preprocess_RNASeq
0
0
0
1
0
1923
Mut_RAS-Paradigm_Preprocess_RNASeq_And_Copy_Number
0
0
0
1
0
1924
Mut_RAS-Paradigm_Report_Preprocess_mRNA
1
0
0
0
0
1925
Mut_RAS-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
1
0
0
0
0
1926
Mut_RAS-Paradigm_Report_Preprocess_RNASeq
0
0
0
1
0
1927
Mut_RAS-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
0
0
0
1
0
1928
Mut_RAS-Paradigm_RNASeq
0
0
0
1
0
1929
Mut_RAS-Paradigm_RNASeq_And_Copy_Number
0
0
0
1
0
1930
Mut_RAS-Pathway_FindEnrichedGenes
1
0
0
0
0
1931
Mut_RAS-Pathway_Hotnet
0
0
0
0
1
1932
Mut_RAS-Pathway_Paradigm_mRNA
1
0
0
0
0
1933
Mut_RAS-Pathway_Paradigm_mRNA_And_Copy_Number
1
0
0
0
0
1934
Mut_RAS-Pathway_Paradigm_RNASeq
0
0
0
1
0
1935
Mut_RAS-Pathway_Paradigm_RNASeq_And_Copy_Number
0
0
0
1
0
1936
Mut_RAS-ProcessCoverageForMutSig1.5
0
0
0
1
0
1937
Mut_RAS-ProcessCoverageForMutSig2.0
0
0
0
1
0
1938
Mut_RAS-RPPA_Clustering_CNMF
0
0
0
1
0
1939
Mut_RAS-RPPA_Clustering_Consensus
0
0
0
1
0
1940
Mut_RAS-Clinical_Pick_Tier1
0
0
0
1
0
1941
Mut_RAS-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
1
0
0
0
0
1942
Mut_RAS-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
1
0
0
0
0
1943
Mut_RAS-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
1
0
0
0
0
1944
Mut_RAS-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
1
0
0
0
0
1945
Mut_RAS-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
1
0
0
0
0
1946
Mut_RAS-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
1
0
0
0
0
1947
Mut_RAS-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
1
0
0
0
0
1948
Mut_RAS-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
1
0
0
0
0
1949
Mut_RAS-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
1
0
0
0
0
1950
Mut_RAS-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
1
0
0
0
0
1951
Mut_RAS-Merge_Clinical
0
0
0
1
0
1952
Mut_RAS-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data
1
0
0
0
0
1953
Mut_RAS-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
1954
Mut_RAS-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data
1
0
0
0
0
1955
Mut_RAS-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
1956
Mut_RAS-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data
1
0
0
0
0
1957
Mut_RAS-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
1958
Mut_RAS-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data
1
0
0
0
0
1959
Mut_RAS-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
1960
Mut_RAS-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
0
0
0
1
0
1961
Mut_RAS-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
1
0
0
0
0
1962
Mut_RAS-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
1
0
0
0
0
1963
Mut_RAS-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
1
0
0
0
0
1964
Mut_RAS-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
1
0
0
0
0
1965
Mut_RAS-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
1
0
0
0
0
1966
Mut_RAS-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
1967
Mut_RAS-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
1
0
0
0
0
1968
Mut_RAS-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
1
0
0
0
0
1969
Mut_RAS-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
1
0
0
0
0
1970
Mut_RAS-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
1971
Mut_RAS-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
1972
Mut_RAS-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data
1
0
0
0
0
1973
Mut_RAS-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
1974
Mut_RAS-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data
1
0
0
0
0
1975
Mut_RAS-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
1976
Mut_RAS-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
0
0
0
1
0
1977
Mut_RAS-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
1978
Mut_RAS-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
1979
Mut_RAS-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
1980
Mut_RAS-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
1981
Mut_RAS-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
1982
Mut_RAS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
0
0
0
1
0
1983
Mut_RAS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
0
0
0
1
0
1984
Mut_RAS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
0
0
0
1
0
1985
Mut_RAS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
0
0
0
1
0
1986
Mut_RAS-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
0
0
0
1
0
1987
Mut_RAS-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
1988
Mut_RAS-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
1989
Mut_RAS-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
1990
Mut_RAS-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
1991
Mut_RAS-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
1992
Mut_RAS-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
1993
Mut_RAS-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
1994
Mut_RAS-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
1995
Mut_RAS-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
1996
Mut_RAS-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
1997
Mut_RAS-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
1998
Mut_RAS-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
1999
Mut_RAS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data
1
0
0
0
0
2000
Mut_RAS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
0
0
0
1
0
2001
Mut_RAS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data
1
0
0
0
0
2002
Mut_RAS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data
1
0
0
0
0
2003
Mut_RAS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data
1
0
0
0
0
2004
Mut_RAS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data
1
0
0
0
0
2005
Mut_RAS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg
0
0
0
1
0
2006
Mut_RAS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
0
0
0
1
0
2007
Mut_RAS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
0
0
0
1
0
2008
Mut_RAS-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg
0
0
0
1
0
2009
Mut_RAS-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data
1
0
0
0
0
2010
Mut_RAS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data
1
0
0
0
0
2011
Mut_RAS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
1
0
0
0
0
2012
Mut_RAS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data
1
0
0
0
0
2013
Mut_RAS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data
1
0
0
0
0
2014
Mut_RAS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data
1
0
0
0
0
2015
Mut_RAS-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data
1
0
0
0
0
2016
Mut_RAS-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
2017
Mut_RAS-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
2018
Mut_RAS-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
2019
Mut_RAS-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data
1
0
0
0
0
2020
Mut_RAS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data
1
0
0
0
0
2021
Mut_RAS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
1
0
0
0
0
2022
Mut_RAS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data
1
0
0
0
0
2023
Mut_RAS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data
1
0
0
0
0
2024
Mut_RAS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data
1
0
0
0
0
2025
Mut_RAS-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data
1
0
0
0
0
2026
Mut_RAS-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
2027
Mut_RAS-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
2028
Mut_RAS-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
2029
Mut_RAS-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
2030
Mut_RAS-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
2031
Mut_RAS-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
2032
Mut_RAS-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
2033
Mut_RAS-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
2034
Mut_RAS-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
2035
Mut_RAS-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data
1
0
0
0
0
2036
Mut_RAS-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
1
0
0
0
0
2037
Mut_RAS-mRNAseq_Preprocess
0
0
0
1
0
2038
Mut_RAS-Mutation_Packager_Calls
0
0
0
1
0
2039
Mut_RAS-Mutation_Packager_Coverage
0
0
0
1
0
2040
Mut_RAS-RPPA_AnnotateWithGene
0
0
0
1
0
2041
Mut_DARK-Add_CustomClinical
0
0
0
1
0
2042
Mut_DARK-Add_CustomEvents
0
0
0
1
0
2043
Mut_DARK-Aggregate_Gene_Status
0
0
0
1
0
2044
Mut_DARK-Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
2045
Mut_DARK-CoMut1.5
1
0
0
0
0
2046
Mut_DARK-CoMut2.0
1
0
0
0
0
2047
Mut_DARK-CoMutCV
1
0
0
0
0
2048
Mut_DARK-CoMutMerged
1
0
0
0
0
2049
Mut_DARK-CopyNumber_Clustering_CNMF
1
0
0
0
0
2050
Mut_DARK-CopyNumber_Clustering_CNMF_armlevel
1
0
0
0
0
2051
Mut_DARK-CopyNumber_Gistic2
0
0
0
1
0
2052
Mut_DARK-CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
2053
Mut_DARK-Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
2054
Mut_DARK-Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
2055
Mut_DARK-Correlate_Clinical_vs_CustomEvents
0
0
0
1
0
2056
Mut_DARK-Correlate_Clinical_vs_Methylation
0
0
0
1
0
2057
Mut_DARK-Correlate_Clinical_vs_miR
1
0
0
0
0
2058
Mut_DARK-Correlate_Clinical_vs_miRseq
0
0
0
1
0
2059
Mut_DARK-Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
2060
Mut_DARK-Correlate_Clinical_vs_mRNA
1
0
0
0
0
2061
Mut_DARK-Correlate_Clinical_vs_mRNAseq
0
0
0
1
0
2062
Mut_DARK-Correlate_Clinical_vs_Mutation
1
0
0
0
0
2063
Mut_DARK-Correlate_Clinical_vs_RPPA
0
0
0
1
0
2064
Mut_DARK-Correlate_CopyNumber_vs_miR
1
0
0
0
0
2065
Mut_DARK-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
2066
Mut_DARK-Correlate_CopyNumber_vs_mRNAseq
0
0
0
1
0
2067
Mut_DARK-Correlate_CustomClinical_vs_CopyNumber_Arm
0
0
0
1
0
2068
Mut_DARK-Correlate_CustomClinical_vs_CopyNumber_Focal
0
0
0
1
0
2069
Mut_DARK-Correlate_CustomClinical_vs_CustomEvents
0
0
0
1
0
2070
Mut_DARK-Correlate_CustomClinical_vs_Methylation
0
0
0
1
0
2071
Mut_DARK-Correlate_CustomClinical_vs_miRseq
0
0
0
1
0
2072
Mut_DARK-Correlate_CustomClinical_vs_Molecular_Subtypes
0
0
0
1
0
2073
Mut_DARK-Correlate_CustomClinical_vs_mRNAseq
0
0
0
1
0
2074
Mut_DARK-Correlate_CustomClinical_vs_Mutation
1
0
0
0
0
2075
Mut_DARK-Correlate_CustomClinical_vs_RPPA
0
0
0
1
0
2076
Mut_DARK-Correlate_Methylation_vs_mRNA
0
0
0
1
0
2077
Mut_DARK-Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
2078
Mut_DARK-Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
2079
Mut_DARK-Correlate_molecularSubtype_vs_Mutation
1
0
0
0
0
2080
Mut_DARK-expanded_coMutPlot
1
0
0
0
0
2081
Mut_DARK-GenerateStickFigures1.5
1
0
0
0
0
2082
Mut_DARK-GenerateStickFigures2.0
1
0
0
0
0
2083
Mut_DARK-GenerateStickFiguresCV
1
0
0
0
0
2084
Mut_DARK-GenerateStickFiguresMerged
1
0
0
0
0
2085
Mut_DARK-LegoPlotter1.5
1
0
0
0
0
2086
Mut_DARK-LegoPlotter2.0
1
0
0
0
0
2087
Mut_DARK-LegoPlotterCV
1
0
0
0
0
2088
Mut_DARK-LegoPlotterMerged
1
0
0
0
0
2089
Mut_DARK-MergeMutSigRunResults
1
0
0
0
0
2090
Mut_DARK-Methylation_Clustering_CNMF
0
0
0
1
0
2091
Mut_DARK-Methylation_Preprocess
0
0
0
1
0
2092
Mut_DARK-miRseq_Clustering_CNMF
0
0
0
1
0
2093
Mut_DARK-miRseq_Clustering_Consensus
0
0
0
1
0
2094
Mut_DARK-miRseq_Mature_Clustering_CNMF
0
0
0
1
0
2095
Mut_DARK-miRseq_Mature_Clustering_Consensus
0
0
0
1
0
2096
Mut_DARK-miRseq_Mature_Preprocess
0
0
0
1
0
2097
Mut_DARK-miRseq_Preprocess
0
0
0
1
0
2098
Mut_DARK-miR_Clustering_CNMF
1
0
0
0
0
2099
Mut_DARK-miR_Clustering_Consensus
1
0
0
0
0
2100
Mut_DARK-miR_FindDirectTargets
1
0
0
0
0
2101
Mut_DARK-mRNAseq_Clustering_CNMF
0
0
0
1
0
2102
Mut_DARK-mRNAseq_Clustering_Consensus
0
0
0
1
0
2103
Mut_DARK-mRNA_Clustering_CNMF
1
0
0
0
0
2104
Mut_DARK-mRNA_Clustering_Consensus
1
0
0
0
0
2105
Mut_DARK-mRNA_Preprocess_Median
1
0
0
0
0
2106
Mut_DARK-Mutation_Assessor
1
0
0
0
0
2107
Mut_DARK-MutSigNozzleReport1.5
1
0
0
0
0
2108
Mut_DARK-MutSigNozzleReport2.0
1
0
0
0
0
2109
Mut_DARK-MutSigNozzleReportCV
1
0
0
0
0
2110
Mut_DARK-MutSigNozzleReportMerged
1
0
0
0
0
2111
Mut_DARK-MutSigPreprocess1.5
1
0
0
0
0
2112
Mut_DARK-MutSigPreprocess2.0
1
0
0
0
0
2113
Mut_DARK-MutSigRun1.5
1
0
0
0
0
2114
Mut_DARK-MutSigRun2.0
1
0
0
0
0
2115
Mut_DARK-MutSigRunCV
1
0
0
0
0
2116
Mut_DARK-ParadigmPreprocess_mRNA
1
0
0
0
0
2117
Mut_DARK-ParadigmPreprocess_RNASeq
0
0
0
1
0
2118
Mut_DARK-Paradigm_mRNA
1
0
0
0
0
2119
Mut_DARK-Paradigm_mRNA_And_CopyNumber
1
0
0
0
0
2120
Mut_DARK-Paradigm_Prepare_mRNA
1
0
0
0
0
2121
Mut_DARK-Paradigm_Prepare_mRNA_And_Copy_Number
1
0
0
0
0
2122
Mut_DARK-Paradigm_Prepare_RNASeq
0
0
0
1
0
2123
Mut_DARK-Paradigm_Prepare_RNASeq_And_Copy_Number
0
0
0
1
0
2124
Mut_DARK-Paradigm_Preprocess_mRNA
1
0
0
0
0
2125
Mut_DARK-Paradigm_Preprocess_mRNA_And_Copy_Number
1
0
0
0
0
2126
Mut_DARK-Paradigm_Preprocess_RNASeq
0
0
0
1
0
2127
Mut_DARK-Paradigm_Preprocess_RNASeq_And_Copy_Number
0
0
0
1
0
2128
Mut_DARK-Paradigm_Report_Preprocess_mRNA
1
0
0
0
0
2129
Mut_DARK-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
1
0
0
0
0
2130
Mut_DARK-Paradigm_Report_Preprocess_RNASeq
0
0
0
1
0
2131
Mut_DARK-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
0
0
0
1
0
2132
Mut_DARK-Paradigm_RNASeq
0
0
0
1
0
2133
Mut_DARK-Paradigm_RNASeq_And_Copy_Number
0
0
0
1
0
2134
Mut_DARK-Pathway_FindEnrichedGenes
1
0
0
0
0
2135
Mut_DARK-Pathway_Hotnet
1
0
0
0
0
2136
Mut_DARK-Pathway_Paradigm_mRNA
1
0
0
0
0
2137
Mut_DARK-Pathway_Paradigm_mRNA_And_Copy_Number
1
0
0
0
0
2138
Mut_DARK-Pathway_Paradigm_RNASeq
0
0
0
1
0
2139
Mut_DARK-Pathway_Paradigm_RNASeq_And_Copy_Number
0
0
0
1
0
2140
Mut_DARK-ProcessCoverageForMutSig1.5
1
0
0
0
0
2141
Mut_DARK-ProcessCoverageForMutSig2.0
1
0
0
0
0
2142
Mut_DARK-RPPA_Clustering_CNMF
0
0
0
1
0
2143
Mut_DARK-RPPA_Clustering_Consensus
0
0
0
1
0
2144
Mut_DARK-Clinical_Pick_Tier1
0
0
0
1
0
2145
Mut_DARK-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
1
0
0
0
0
2146
Mut_DARK-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
1
0
0
0
0
2147
Mut_DARK-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
1
0
0
0
0
2148
Mut_DARK-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
1
0
0
0
0
2149
Mut_DARK-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
1
0
0
0
0
2150
Mut_DARK-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
1
0
0
0
0
2151
Mut_DARK-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
1
0
0
0
0
2152
Mut_DARK-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
1
0
0
0
0
2153
Mut_DARK-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
1
0
0
0
0
2154
Mut_DARK-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
1
0
0
0
0
2155
Mut_DARK-Merge_Clinical
0
0
0
1
0
2156
Mut_DARK-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data
1
0
0
0
0
2157
Mut_DARK-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
2158
Mut_DARK-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data
1
0
0
0
0
2159
Mut_DARK-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
2160
Mut_DARK-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data
1
0
0
0
0
2161
Mut_DARK-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
2162
Mut_DARK-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data
1
0
0
0
0
2163
Mut_DARK-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
2164
Mut_DARK-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
0
0
0
1
0
2165
Mut_DARK-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
1
0
0
0
0
2166
Mut_DARK-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
1
0
0
0
0
2167
Mut_DARK-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
1
0
0
0
0
2168
Mut_DARK-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
1
0
0
0
0
2169
Mut_DARK-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
1
0
0
0
0
2170
Mut_DARK-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
2171
Mut_DARK-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
1
0
0
0
0
2172
Mut_DARK-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
1
0
0
0
0
2173
Mut_DARK-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
1
0
0
0
0
2174
Mut_DARK-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
2175
Mut_DARK-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
2176
Mut_DARK-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data
1
0
0
0
0
2177
Mut_DARK-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
2178
Mut_DARK-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data
1
0
0
0
0
2179
Mut_DARK-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
2180
Mut_DARK-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
0
0
0
1
0
2181
Mut_DARK-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
2182
Mut_DARK-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
2183
Mut_DARK-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
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0
0
0
0
2184
Mut_DARK-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
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0
0
0
0
2185
Mut_DARK-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
2186
Mut_DARK-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
0
0
0
1
0
2187
Mut_DARK-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
0
0
0
1
0
2188
Mut_DARK-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
0
0
0
1
0
2189
Mut_DARK-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
0
0
0
1
0
2190
Mut_DARK-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
0
0
0
1
0
2191
Mut_DARK-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
2192
Mut_DARK-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
2193
Mut_DARK-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
2194
Mut_DARK-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
2195
Mut_DARK-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
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0
0
0
0
2196
Mut_DARK-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
2197
Mut_DARK-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
2198
Mut_DARK-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
2199
Mut_DARK-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
2200
Mut_DARK-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
2201
Mut_DARK-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
2202
Mut_DARK-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
2203
Mut_DARK-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data
1
0
0
0
0
2204
Mut_DARK-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
0
0
0
1
0
2205
Mut_DARK-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data
1
0
0
0
0
2206
Mut_DARK-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data
1
0
0
0
0
2207
Mut_DARK-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data
1
0
0
0
0
2208
Mut_DARK-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data
1
0
0
0
0
2209
Mut_DARK-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg
0
0
0
1
0
2210
Mut_DARK-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
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0
0
1
0
2211
Mut_DARK-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
0
0
0
1
0
2212
Mut_DARK-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg
0
0
0
1
0
2213
Mut_DARK-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data
1
0
0
0
0
2214
Mut_DARK-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data
1
0
0
0
0
2215
Mut_DARK-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
1
0
0
0
0
2216
Mut_DARK-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data
1
0
0
0
0
2217
Mut_DARK-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data
1
0
0
0
0
2218
Mut_DARK-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data
1
0
0
0
0
2219
Mut_DARK-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data
1
0
0
0
0
2220
Mut_DARK-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
2221
Mut_DARK-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
2222
Mut_DARK-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
2223
Mut_DARK-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data
1
0
0
0
0
2224
Mut_DARK-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data
1
0
0
0
0
2225
Mut_DARK-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
1
0
0
0
0
2226
Mut_DARK-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data
1
0
0
0
0
2227
Mut_DARK-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data
1
0
0
0
0
2228
Mut_DARK-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data
1
0
0
0
0
2229
Mut_DARK-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data
1
0
0
0
0
2230
Mut_DARK-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
2231
Mut_DARK-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
2232
Mut_DARK-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
2233
Mut_DARK-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
2234
Mut_DARK-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
2235
Mut_DARK-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
2236
Mut_DARK-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
2237
Mut_DARK-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
2238
Mut_DARK-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
2239
Mut_DARK-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data
1
0
0
0
0
2240
Mut_DARK-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
1
0
0
0
0
2241
Mut_DARK-mRNAseq_Preprocess
0
0
0
1
0
2242
Mut_DARK-Mutation_Packager_Calls
0
0
0
1
0
2243
Mut_DARK-Mutation_Packager_Coverage
0
0
0
1
0
2244
Mut_DARK-RPPA_AnnotateWithGene
0
0
0
1
0
2245
Mut_BRAF-Add_CustomClinical
0
0
0
0
1
2246
Mut_BRAF-Add_CustomEvents
0
0
0
1
0
2247
Mut_BRAF-Aggregate_Gene_Status
0
0
0
1
0
2248
Mut_BRAF-Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
2249
Mut_BRAF-CoMut1.5
1
0
0
0
0
2250
Mut_BRAF-CoMut2.0
1
0
0
0
0
2251
Mut_BRAF-CoMutCV
1
0
0
0
0
2252
Mut_BRAF-CoMutMerged
1
0
0
0
0
2253
Mut_BRAF-CopyNumber_Clustering_CNMF
0
0
0
1
0
2254
Mut_BRAF-CopyNumber_Clustering_CNMF_armlevel
0
0
0
0
1
2255
Mut_BRAF-CopyNumber_Gistic2
0
0
0
1
0
2256
Mut_BRAF-CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
2257
Mut_BRAF-Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
2258
Mut_BRAF-Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
2259
Mut_BRAF-Correlate_Clinical_vs_CustomEvents
0
0
0
1
0
2260
Mut_BRAF-Correlate_Clinical_vs_Methylation
0
0
0
1
0
2261
Mut_BRAF-Correlate_Clinical_vs_miR
1
0
0
0
0
2262
Mut_BRAF-Correlate_Clinical_vs_miRseq
0
0
0
1
0
2263
Mut_BRAF-Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
2264
Mut_BRAF-Correlate_Clinical_vs_mRNA
1
0
0
0
0
2265
Mut_BRAF-Correlate_Clinical_vs_mRNAseq
0
0
0
1
0
2266
Mut_BRAF-Correlate_Clinical_vs_Mutation
1
0
0
0
0
2267
Mut_BRAF-Correlate_Clinical_vs_RPPA
0
0
0
1
0
2268
Mut_BRAF-Correlate_CopyNumber_vs_miR
1
0
0
0
0
2269
Mut_BRAF-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
2270
Mut_BRAF-Correlate_CopyNumber_vs_mRNAseq
0
0
0
1
0
2271
Mut_BRAF-Correlate_CustomClinical_vs_CopyNumber_Arm
1
0
0
0
0
2272
Mut_BRAF-Correlate_CustomClinical_vs_CopyNumber_Focal
1
0
0
0
0
2273
Mut_BRAF-Correlate_CustomClinical_vs_CustomEvents
1
0
0
0
0
2274
Mut_BRAF-Correlate_CustomClinical_vs_Methylation
1
0
0
0
0
2275
Mut_BRAF-Correlate_CustomClinical_vs_miRseq
1
0
0
0
0
2276
Mut_BRAF-Correlate_CustomClinical_vs_Molecular_Subtypes
1
0
0
0
0
2277
Mut_BRAF-Correlate_CustomClinical_vs_mRNAseq
1
0
0
0
0
2278
Mut_BRAF-Correlate_CustomClinical_vs_Mutation
1
0
0
0
0
2279
Mut_BRAF-Correlate_CustomClinical_vs_RPPA
1
0
0
0
0
2280
Mut_BRAF-Correlate_Methylation_vs_mRNA
0
0
0
1
0
2281
Mut_BRAF-Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
2282
Mut_BRAF-Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
2283
Mut_BRAF-Correlate_molecularSubtype_vs_Mutation
1
0
0
0
0
2284
Mut_BRAF-expanded_coMutPlot
1
0
0
0
0
2285
Mut_BRAF-GenerateStickFigures1.5
1
0
0
0
0
2286
Mut_BRAF-GenerateStickFigures2.0
1
0
0
0
0
2287
Mut_BRAF-GenerateStickFiguresCV
1
0
0
0
0
2288
Mut_BRAF-GenerateStickFiguresMerged
1
0
0
0
0
2289
Mut_BRAF-LegoPlotter1.5
1
0
0
0
0
2290
Mut_BRAF-LegoPlotter2.0
1
0
0
0
0
2291
Mut_BRAF-LegoPlotterCV
1
0
0
0
0
2292
Mut_BRAF-LegoPlotterMerged
1
0
0
0
0
2293
Mut_BRAF-MergeMutSigRunResults
1
0
0
0
0
2294
Mut_BRAF-Methylation_Clustering_CNMF
0
0
0
1
0
2295
Mut_BRAF-Methylation_Preprocess
0
0
0
1
0
2296
Mut_BRAF-miRseq_Clustering_CNMF
0
0
0
1
0
2297
Mut_BRAF-miRseq_Clustering_Consensus
0
0
0
1
0
2298
Mut_BRAF-miRseq_Mature_Clustering_CNMF
0
0
0
1
0
2299
Mut_BRAF-miRseq_Mature_Clustering_Consensus
0
0
0
1
0
2300
Mut_BRAF-miRseq_Mature_Preprocess
0
0
0
1
0
2301
Mut_BRAF-miRseq_Preprocess
0
0
0
1
0
2302
Mut_BRAF-miR_Clustering_CNMF
1
0
0
0
0
2303
Mut_BRAF-miR_Clustering_Consensus
1
0
0
0
0
2304
Mut_BRAF-miR_FindDirectTargets
1
0
0
0
0
2305
Mut_BRAF-mRNAseq_Clustering_CNMF
0
0
0
1
0
2306
Mut_BRAF-mRNAseq_Clustering_Consensus
0
0
0
1
0
2307
Mut_BRAF-mRNA_Clustering_CNMF
1
0
0
0
0
2308
Mut_BRAF-mRNA_Clustering_Consensus
1
0
0
0
0
2309
Mut_BRAF-mRNA_Preprocess_Median
1
0
0
0
0
2310
Mut_BRAF-Mutation_Assessor
1
0
0
0
0
2311
Mut_BRAF-MutSigNozzleReport1.5
1
0
0
0
0
2312
Mut_BRAF-MutSigNozzleReport2.0
1
0
0
0
0
2313
Mut_BRAF-MutSigNozzleReportCV
1
0
0
0
0
2314
Mut_BRAF-MutSigNozzleReportMerged
1
0
0
0
0
2315
Mut_BRAF-MutSigPreprocess1.5
1
0
0
0
0
2316
Mut_BRAF-MutSigPreprocess2.0
1
0
0
0
0
2317
Mut_BRAF-MutSigRun1.5
1
0
0
0
0
2318
Mut_BRAF-MutSigRun2.0
1
0
0
0
0
2319
Mut_BRAF-MutSigRunCV
1
0
0
0
0
2320
Mut_BRAF-ParadigmPreprocess_mRNA
1
0
0
0
0
2321
Mut_BRAF-ParadigmPreprocess_RNASeq
0
0
0
1
0
2322
Mut_BRAF-Paradigm_mRNA
1
0
0
0
0
2323
Mut_BRAF-Paradigm_mRNA_And_CopyNumber
1
0
0
0
0
2324
Mut_BRAF-Paradigm_Prepare_mRNA
1
0
0
0
0
2325
Mut_BRAF-Paradigm_Prepare_mRNA_And_Copy_Number
1
0
0
0
0
2326
Mut_BRAF-Paradigm_Prepare_RNASeq
0
0
0
1
0
2327
Mut_BRAF-Paradigm_Prepare_RNASeq_And_Copy_Number
0
0
0
1
0
2328
Mut_BRAF-Paradigm_Preprocess_mRNA
1
0
0
0
0
2329
Mut_BRAF-Paradigm_Preprocess_mRNA_And_Copy_Number
1
0
0
0
0
2330
Mut_BRAF-Paradigm_Preprocess_RNASeq
0
0
0
1
0
2331
Mut_BRAF-Paradigm_Preprocess_RNASeq_And_Copy_Number
0
0
0
1
0
2332
Mut_BRAF-Paradigm_Report_Preprocess_mRNA
1
0
0
0
0
2333
Mut_BRAF-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
1
0
0
0
0
2334
Mut_BRAF-Paradigm_Report_Preprocess_RNASeq
0
0
0
1
0
2335
Mut_BRAF-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
0
0
0
1
0
2336
Mut_BRAF-Paradigm_RNASeq
0
0
0
1
0
2337
Mut_BRAF-Paradigm_RNASeq_And_Copy_Number
0
0
0
1
0
2338
Mut_BRAF-Pathway_FindEnrichedGenes
1
0
0
0
0
2339
Mut_BRAF-Pathway_Hotnet
1
0
0
0
0
2340
Mut_BRAF-Pathway_Paradigm_mRNA
1
0
0
0
0
2341
Mut_BRAF-Pathway_Paradigm_mRNA_And_Copy_Number
1
0
0
0
0
2342
Mut_BRAF-Pathway_Paradigm_RNASeq
0
0
0
1
0
2343
Mut_BRAF-Pathway_Paradigm_RNASeq_And_Copy_Number
0
0
0
1
0
2344
Mut_BRAF-ProcessCoverageForMutSig1.5
1
0
0
0
0
2345
Mut_BRAF-ProcessCoverageForMutSig2.0
1
0
0
0
0
2346
Mut_BRAF-RPPA_Clustering_CNMF
0
0
0
1
0
2347
Mut_BRAF-RPPA_Clustering_Consensus
0
0
0
1
0
2348
Mut_BRAF-Clinical_Pick_Tier1
0
0
0
1
0
2349
Mut_BRAF-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
1
0
0
0
0
2350
Mut_BRAF-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
1
0
0
0
0
2351
Mut_BRAF-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
1
0
0
0
0
2352
Mut_BRAF-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
1
0
0
0
0
2353
Mut_BRAF-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
1
0
0
0
0
2354
Mut_BRAF-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
1
0
0
0
0
2355
Mut_BRAF-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
1
0
0
0
0
2356
Mut_BRAF-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
1
0
0
0
0
2357
Mut_BRAF-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
1
0
0
0
0
2358
Mut_BRAF-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
1
0
0
0
0
2359
Mut_BRAF-Merge_Clinical
0
0
0
1
0
2360
Mut_BRAF-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data
1
0
0
0
0
2361
Mut_BRAF-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
2362
Mut_BRAF-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data
1
0
0
0
0
2363
Mut_BRAF-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
2364
Mut_BRAF-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data
1
0
0
0
0
2365
Mut_BRAF-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
2366
Mut_BRAF-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data
1
0
0
0
0
2367
Mut_BRAF-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
2368
Mut_BRAF-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
0
0
0
1
0
2369
Mut_BRAF-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
1
0
0
0
0
2370
Mut_BRAF-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
1
0
0
0
0
2371
Mut_BRAF-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
1
0
0
0
0
2372
Mut_BRAF-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
1
0
0
0
0
2373
Mut_BRAF-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
1
0
0
0
0
2374
Mut_BRAF-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
2375
Mut_BRAF-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
1
0
0
0
0
2376
Mut_BRAF-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
1
0
0
0
0
2377
Mut_BRAF-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
1
0
0
0
0
2378
Mut_BRAF-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
2379
Mut_BRAF-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
2380
Mut_BRAF-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data
1
0
0
0
0
2381
Mut_BRAF-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
2382
Mut_BRAF-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data
1
0
0
0
0
2383
Mut_BRAF-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
2384
Mut_BRAF-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
0
0
0
1
0
2385
Mut_BRAF-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
2386
Mut_BRAF-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
2387
Mut_BRAF-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
2388
Mut_BRAF-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
2389
Mut_BRAF-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
2390
Mut_BRAF-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
0
0
0
1
0
2391
Mut_BRAF-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
0
0
0
1
0
2392
Mut_BRAF-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
0
0
0
1
0
2393
Mut_BRAF-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
0
0
0
1
0
2394
Mut_BRAF-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
0
0
0
1
0
2395
Mut_BRAF-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
2396
Mut_BRAF-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
2397
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HistologicalType_Tall_cell-LegoPlotter1.5
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HistologicalType_Tall_cell-LegoPlotter2.0
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HistologicalType_Tall_cell-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
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0
0
0
0
2574
HistologicalType_Tall_cell-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
1
0
0
0
0
2575
HistologicalType_Tall_cell-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
1
0
0
0
0
2576
HistologicalType_Tall_cell-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
1
0
0
0
0
2577
HistologicalType_Tall_cell-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
1
0
0
0
0
2578
HistologicalType_Tall_cell-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
2579
HistologicalType_Tall_cell-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
1
0
0
0
0
2580
HistologicalType_Tall_cell-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
1
0
0
0
0
2581
HistologicalType_Tall_cell-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
1
0
0
0
0
2582
HistologicalType_Tall_cell-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
2583
HistologicalType_Tall_cell-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
2584
HistologicalType_Tall_cell-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data
1
0
0
0
0
2585
HistologicalType_Tall_cell-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
2586
HistologicalType_Tall_cell-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data
1
0
0
0
0
2587
HistologicalType_Tall_cell-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
2588
HistologicalType_Tall_cell-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
0
0
0
1
0
2589
HistologicalType_Tall_cell-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
2590
HistologicalType_Tall_cell-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
2591
HistologicalType_Tall_cell-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
2592
HistologicalType_Tall_cell-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
2593
HistologicalType_Tall_cell-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
2594
HistologicalType_Tall_cell-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
0
0
0
1
0
2595
HistologicalType_Tall_cell-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
0
0
0
1
0
2596
HistologicalType_Tall_cell-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
0
0
0
1
0
2597
HistologicalType_Tall_cell-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
0
0
0
1
0
2598
HistologicalType_Tall_cell-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
0
0
0
1
0
2599
HistologicalType_Tall_cell-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
2600
HistologicalType_Tall_cell-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
2601
HistologicalType_Tall_cell-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
2602
HistologicalType_Tall_cell-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
2603
HistologicalType_Tall_cell-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
2604
HistologicalType_Tall_cell-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
2605
HistologicalType_Tall_cell-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
2606
HistologicalType_Tall_cell-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
2607
HistologicalType_Tall_cell-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
2608
HistologicalType_Tall_cell-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
2609
HistologicalType_Tall_cell-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
2610
HistologicalType_Tall_cell-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
2611
HistologicalType_Tall_cell-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data
1
0
0
0
0
2612
HistologicalType_Tall_cell-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
0
0
0
1
0
2613
HistologicalType_Tall_cell-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data
1
0
0
0
0
2614
HistologicalType_Tall_cell-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data
1
0
0
0
0
2615
HistologicalType_Tall_cell-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data
1
0
0
0
0
2616
HistologicalType_Tall_cell-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data
1
0
0
0
0
2617
HistologicalType_Tall_cell-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg
0
0
0
1
0
2618
HistologicalType_Tall_cell-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
0
0
0
1
0
2619
HistologicalType_Tall_cell-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
0
0
0
1
0
2620
HistologicalType_Tall_cell-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg
0
0
0
1
0
2621
HistologicalType_Tall_cell-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data
1
0
0
0
0
2622
HistologicalType_Tall_cell-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data
1
0
0
0
0
2623
HistologicalType_Tall_cell-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
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0
0
0
0
2624
HistologicalType_Tall_cell-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data
1
0
0
0
0
2625
HistologicalType_Tall_cell-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data
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0
0
0
0
2626
HistologicalType_Tall_cell-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data
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0
0
0
0
2627
HistologicalType_Tall_cell-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data
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0
0
0
0
2628
HistologicalType_Tall_cell-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
1
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0
0
0
2629
HistologicalType_Tall_cell-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
2630
HistologicalType_Tall_cell-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
2631
HistologicalType_Tall_cell-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data
1
0
0
0
0
2632
HistologicalType_Tall_cell-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data
1
0
0
0
0
2633
HistologicalType_Tall_cell-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
1
0
0
0
0
2634
HistologicalType_Tall_cell-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data
1
0
0
0
0
2635
HistologicalType_Tall_cell-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data
1
0
0
0
0
2636
HistologicalType_Tall_cell-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data
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0
0
0
0
2637
HistologicalType_Tall_cell-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data
1
0
0
0
0
2638
HistologicalType_Tall_cell-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
2639
HistologicalType_Tall_cell-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
2640
HistologicalType_Tall_cell-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
2641
HistologicalType_Tall_cell-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
2642
HistologicalType_Tall_cell-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
2643
HistologicalType_Tall_cell-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
2644
HistologicalType_Tall_cell-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
2645
HistologicalType_Tall_cell-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
2646
HistologicalType_Tall_cell-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
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0
0
0
0
2647
HistologicalType_Tall_cell-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data
1
0
0
0
0
2648
HistologicalType_Tall_cell-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
1
0
0
0
0
2649
HistologicalType_Tall_cell-mRNAseq_Preprocess
0
0
0
1
0
2650
HistologicalType_Tall_cell-Mutation_Packager_Calls
0
0
0
1
0
2651
HistologicalType_Tall_cell-Mutation_Packager_Coverage
0
0
0
1
0
2652
HistologicalType_Tall_cell-RPPA_AnnotateWithGene
0
0
0
1
0
2653
HistologicalType_Other-Add_CustomClinical
1
0
0
0
0
2654
HistologicalType_Other-Add_CustomEvents
1
0
0
0
0
2655
HistologicalType_Other-Aggregate_Gene_Status
0
0
0
1
0
2656
HistologicalType_Other-Aggregate_Molecular_Subtype_Clusters
1
0
0
0
0
2657
HistologicalType_Other-CoMut1.5
0
0
0
1
0
2658
HistologicalType_Other-CoMut2.0
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0
0
1
0
2659
HistologicalType_Other-CoMutCV
0
0
0
1
0
2660
HistologicalType_Other-CoMutMerged
0
0
0
1
0
2661
HistologicalType_Other-CopyNumber_Clustering_CNMF
1
0
0
0
0
2662
HistologicalType_Other-CopyNumber_Clustering_CNMF_armlevel
1
0
0
0
0
2663
HistologicalType_Other-CopyNumber_Gistic2
0
0
0
1
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2664
HistologicalType_Other-CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
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2665
HistologicalType_Other-Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
2666
HistologicalType_Other-Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
2667
HistologicalType_Other-Correlate_Clinical_vs_CustomEvents
1
0
0
0
0
2668
HistologicalType_Other-Correlate_Clinical_vs_Methylation
1
0
0
0
0
2669
HistologicalType_Other-Correlate_Clinical_vs_miR
1
0
0
0
0
2670
HistologicalType_Other-Correlate_Clinical_vs_miRseq
1
0
0
0
0
2671
HistologicalType_Other-Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
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2672
HistologicalType_Other-Correlate_Clinical_vs_mRNA
1
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0
0
0
2673
HistologicalType_Other-Correlate_Clinical_vs_mRNAseq
1
0
0
0
0
2674
HistologicalType_Other-Correlate_Clinical_vs_Mutation
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0
0
0
1
2675
HistologicalType_Other-Correlate_Clinical_vs_RPPA
1
0
0
0
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2676
HistologicalType_Other-Correlate_CopyNumber_vs_miR
1
0
0
0
0
2677
HistologicalType_Other-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
2678
HistologicalType_Other-Correlate_CopyNumber_vs_mRNAseq
1
0
0
0
0
2679
HistologicalType_Other-Correlate_CustomClinical_vs_CopyNumber_Arm
1
0
0
0
0
2680
HistologicalType_Other-Correlate_CustomClinical_vs_CopyNumber_Focal
1
0
0
0
0
2681
HistologicalType_Other-Correlate_CustomClinical_vs_CustomEvents
1
0
0
0
0
2682
HistologicalType_Other-Correlate_CustomClinical_vs_Methylation
1
0
0
0
0
2683
HistologicalType_Other-Correlate_CustomClinical_vs_miRseq
1
0
0
0
0
2684
HistologicalType_Other-Correlate_CustomClinical_vs_Molecular_Subtypes
1
0
0
0
0
2685
HistologicalType_Other-Correlate_CustomClinical_vs_mRNAseq
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0
0
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2686
HistologicalType_Other-Correlate_CustomClinical_vs_Mutation
1
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0
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2687
HistologicalType_Other-Correlate_CustomClinical_vs_RPPA
1
0
0
0
0
2688
HistologicalType_Other-Correlate_Methylation_vs_mRNA
1
0
0
0
0
2689
HistologicalType_Other-Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
2690
HistologicalType_Other-Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
2691
HistologicalType_Other-Correlate_molecularSubtype_vs_Mutation
1
0
0
0
0
2692
HistologicalType_Other-expanded_coMutPlot
1
0
0
0
0
2693
HistologicalType_Other-GenerateStickFigures1.5
0
0
0
1
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2694
HistologicalType_Other-GenerateStickFigures2.0
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0
0
1
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2695
HistologicalType_Other-GenerateStickFiguresCV
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0
0
1
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2696
HistologicalType_Other-GenerateStickFiguresMerged
0
0
0
1
0
2697
HistologicalType_Other-LegoPlotter1.5
0
0
0
1
0
2698
HistologicalType_Other-LegoPlotter2.0
0
0
0
1
0
2699
HistologicalType_Other-LegoPlotterCV
0
0
0
1
0
2700
HistologicalType_Other-LegoPlotterMerged
0
0
0
1
0
2701
HistologicalType_Other-MergeMutSigRunResults
0
0
0
1
0
2702
HistologicalType_Other-Methylation_Clustering_CNMF
0
0
0
0
1
2703
HistologicalType_Other-Methylation_Preprocess
0
0
0
1
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2704
HistologicalType_Other-miRseq_Clustering_CNMF
1
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0
0
0
2705
HistologicalType_Other-miRseq_Clustering_Consensus
1
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0
0
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2706
HistologicalType_Other-miRseq_Mature_Clustering_CNMF
1
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0
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2707
HistologicalType_Other-miRseq_Mature_Clustering_Consensus
1
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0
0
2708
HistologicalType_Other-miRseq_Mature_Preprocess
0
0
0
1
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2709
HistologicalType_Other-miRseq_Preprocess
0
0
0
1
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2710
HistologicalType_Other-miR_Clustering_CNMF
1
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0
0
0
2711
HistologicalType_Other-miR_Clustering_Consensus
1
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0
0
0
2712
HistologicalType_Other-miR_FindDirectTargets
1
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0
0
0
2713
HistologicalType_Other-mRNAseq_Clustering_CNMF
1
0
0
0
0
2714
HistologicalType_Other-mRNAseq_Clustering_Consensus
1
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0
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2715
HistologicalType_Other-mRNA_Clustering_CNMF
1
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2716
HistologicalType_Other-mRNA_Clustering_Consensus
1
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0
0
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2717
HistologicalType_Other-mRNA_Preprocess_Median
1
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0
0
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2718
HistologicalType_Other-Mutation_Assessor
0
0
0
1
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2719
HistologicalType_Other-MutSigNozzleReport1.5
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0
0
1
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2720
HistologicalType_Other-MutSigNozzleReport2.0
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0
1
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2721
HistologicalType_Other-MutSigNozzleReportCV
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0
0
1
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2722
HistologicalType_Other-MutSigNozzleReportMerged
0
0
0
1
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2723
HistologicalType_Other-MutSigPreprocess1.5
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0
0
1
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2724
HistologicalType_Other-MutSigPreprocess2.0
0
0
0
1
0
2725
HistologicalType_Other-MutSigRun1.5
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0
0
1
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2726
HistologicalType_Other-MutSigRun2.0
0
0
0
1
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2727
HistologicalType_Other-MutSigRunCV
0
0
0
1
0
2728
HistologicalType_Other-ParadigmPreprocess_mRNA
1
0
0
0
0
2729
HistologicalType_Other-ParadigmPreprocess_RNASeq
1
0
0
0
0
2730
HistologicalType_Other-Paradigm_mRNA
1
0
0
0
0
2731
HistologicalType_Other-Paradigm_mRNA_And_CopyNumber
1
0
0
0
0
2732
HistologicalType_Other-Paradigm_Prepare_mRNA
1
0
0
0
0
2733
HistologicalType_Other-Paradigm_Prepare_mRNA_And_Copy_Number
1
0
0
0
0
2734
HistologicalType_Other-Paradigm_Prepare_RNASeq
1
0
0
0
0
2735
HistologicalType_Other-Paradigm_Prepare_RNASeq_And_Copy_Number
1
0
0
0
0
2736
HistologicalType_Other-Paradigm_Preprocess_mRNA
1
0
0
0
0
2737
HistologicalType_Other-Paradigm_Preprocess_mRNA_And_Copy_Number
1
0
0
0
0
2738
HistologicalType_Other-Paradigm_Preprocess_RNASeq
1
0
0
0
0
2739
HistologicalType_Other-Paradigm_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
2740
HistologicalType_Other-Paradigm_Report_Preprocess_mRNA
1
0
0
0
0
2741
HistologicalType_Other-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
1
0
0
0
0
2742
HistologicalType_Other-Paradigm_Report_Preprocess_RNASeq
1
0
0
0
0
2743
HistologicalType_Other-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
2744
HistologicalType_Other-Paradigm_RNASeq
1
0
0
0
0
2745
HistologicalType_Other-Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
2746
HistologicalType_Other-Pathway_FindEnrichedGenes
1
0
0
0
0
2747
HistologicalType_Other-Pathway_Hotnet
0
0
0
0
1
2748
HistologicalType_Other-Pathway_Paradigm_mRNA
1
0
0
0
0
2749
HistologicalType_Other-Pathway_Paradigm_mRNA_And_Copy_Number
1
0
0
0
0
2750
HistologicalType_Other-Pathway_Paradigm_RNASeq
1
0
0
0
0
2751
HistologicalType_Other-Pathway_Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
2752
HistologicalType_Other-ProcessCoverageForMutSig1.5
0
0
0
1
0
2753
HistologicalType_Other-ProcessCoverageForMutSig2.0
0
0
0
1
0
2754
HistologicalType_Other-RPPA_Clustering_CNMF
1
0
0
0
0
2755
HistologicalType_Other-RPPA_Clustering_Consensus
1
0
0
0
0
2756
HistologicalType_Other-Clinical_Pick_Tier1
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0
0
1
0
2757
HistologicalType_Other-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
1
0
0
0
0
2758
HistologicalType_Other-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
1
0
0
0
0
2759
HistologicalType_Other-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
1
0
0
0
0
2760
HistologicalType_Other-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
1
0
0
0
0
2761
HistologicalType_Other-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
1
0
0
0
0
2762
HistologicalType_Other-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
1
0
0
0
0
2763
HistologicalType_Other-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
1
0
0
0
0
2764
HistologicalType_Other-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
1
0
0
0
0
2765
HistologicalType_Other-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
1
0
0
0
0
2766
HistologicalType_Other-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
1
0
0
0
0
2767
HistologicalType_Other-Merge_Clinical
0
0
0
1
0
2768
HistologicalType_Other-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data
1
0
0
0
0
2769
HistologicalType_Other-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
2770
HistologicalType_Other-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data
1
0
0
0
0
2771
HistologicalType_Other-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
2772
HistologicalType_Other-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data
1
0
0
0
0
2773
HistologicalType_Other-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
1
0
0
0
0
2774
HistologicalType_Other-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data
1
0
0
0
0
2775
HistologicalType_Other-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
1
0
0
0
0
2776
HistologicalType_Other-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
0
0
0
1
0
2777
HistologicalType_Other-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
1
0
0
0
0
2778
HistologicalType_Other-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
1
0
0
0
0
2779
HistologicalType_Other-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
1
0
0
0
0
2780
HistologicalType_Other-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
1
0
0
0
0
2781
HistologicalType_Other-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
1
0
0
0
0
2782
HistologicalType_Other-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
0
0
0
1
0
2783
HistologicalType_Other-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
1
0
0
0
0
2784
HistologicalType_Other-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
1
0
0
0
0
2785
HistologicalType_Other-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
1
0
0
0
0
2786
HistologicalType_Other-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
0
0
0
1
0
2787
HistologicalType_Other-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
0
0
0
1
0
2788
HistologicalType_Other-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data
1
0
0
0
0
2789
HistologicalType_Other-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
2790
HistologicalType_Other-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data
1
0
0
0
0
2791
HistologicalType_Other-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
1
0
0
0
0
2792
HistologicalType_Other-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
0
0
0
1
0
2793
HistologicalType_Other-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
1
0
0
0
0
2794
HistologicalType_Other-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
1
0
0
0
0
2795
HistologicalType_Other-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
1
0
0
0
0
2796
HistologicalType_Other-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
1
0
0
0
0
2797
HistologicalType_Other-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
1
0
0
0
0
2798
HistologicalType_Other-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
0
0
0
1
0
2799
HistologicalType_Other-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
0
0
0
1
0
2800
HistologicalType_Other-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
0
0
0
1
0
2801
HistologicalType_Other-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
0
0
0
1
0
2802
HistologicalType_Other-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
0
0
0
1
0
2803
HistologicalType_Other-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
2804
HistologicalType_Other-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
2805
HistologicalType_Other-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
2806
HistologicalType_Other-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
2807
HistologicalType_Other-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
2808
HistologicalType_Other-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
2809
HistologicalType_Other-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
1
0
0
0
0
2810
HistologicalType_Other-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
1
0
0
0
0
2811
HistologicalType_Other-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
1
0
0
0
0
2812
HistologicalType_Other-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
1
0
0
0
0
2813
HistologicalType_Other-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data
1
0
0
0
0
2814
HistologicalType_Other-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data
1
0
0
0
0
2815
HistologicalType_Other-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data
1
0
0
0
0
2816
HistologicalType_Other-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
0
0
0
1
0
2817
HistologicalType_Other-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data
1
0
0
0
0
2818
HistologicalType_Other-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data
1
0
0
0
0
2819
HistologicalType_Other-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data
1
0
0
0
0
2820
HistologicalType_Other-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data
1
0
0
0
0
2821
HistologicalType_Other-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg
0
0
0
1
0
2822
HistologicalType_Other-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
0
0
0
1
0
2823
HistologicalType_Other-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
0
0
0
1
0
2824
HistologicalType_Other-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg
0
0
0
1
0
2825
HistologicalType_Other-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data
1
0
0
0
0
2826
HistologicalType_Other-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data
1
0
0
0
0
2827
HistologicalType_Other-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
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0
0
0
0
2828
HistologicalType_Other-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data
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0
0
0
0
2829
HistologicalType_Other-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data
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0
0
0
0
2830
HistologicalType_Other-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data
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0
0
0
0
2831
HistologicalType_Other-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data
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0
0
0
0
2832
HistologicalType_Other-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
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0
0
0
0
2833
HistologicalType_Other-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
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0
0
0
0
2834
HistologicalType_Other-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
2835
HistologicalType_Other-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data
1
0
0
0
0
2836
HistologicalType_Other-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data
1
0
0
0
0
2837
HistologicalType_Other-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
1
0
0
0
0
2838
HistologicalType_Other-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data
1
0
0
0
0
2839
HistologicalType_Other-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data
1
0
0
0
0
2840
HistologicalType_Other-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data
1
0
0
0
0
2841
HistologicalType_Other-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data
1
0
0
0
0
2842
HistologicalType_Other-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
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0
0
0
0
2843
HistologicalType_Other-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
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0
0
0
0
2844
HistologicalType_Other-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
2845
HistologicalType_Other-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
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0
0
0
0
2846
HistologicalType_Other-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
2847
HistologicalType_Other-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
2848
HistologicalType_Other-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
2849
HistologicalType_Other-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
2850
HistologicalType_Other-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
2851
HistologicalType_Other-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data
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0
0
0
0
2852
HistologicalType_Other-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
1
0
0
0
0
2853
HistologicalType_Other-mRNAseq_Preprocess
0
0
0
1
0
2854
HistologicalType_Other-Mutation_Packager_Calls
0
0
0
1
0
2855
HistologicalType_Other-Mutation_Packager_Coverage
0
0
0
1
0
2856
HistologicalType_Other-RPPA_AnnotateWithGene
0
0
0
1
0
2857
HistologicalType_Follicular-Add_CustomClinical
0
0
0
1
0
2858
HistologicalType_Follicular-Add_CustomEvents
0
0
0
1
0
2859
HistologicalType_Follicular-Aggregate_Gene_Status
0
0
0
1
0
2860
HistologicalType_Follicular-Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
2861
HistologicalType_Follicular-CoMut1.5
0
0
0
1
0
2862
HistologicalType_Follicular-CoMut2.0
0
0
0
1
0
2863
HistologicalType_Follicular-CoMutCV
0
0
0
1
0
2864
HistologicalType_Follicular-CoMutMerged
0
0
0
1
0
2865
HistologicalType_Follicular-CopyNumber_Clustering_CNMF
1
0
0
0
0
2866
HistologicalType_Follicular-CopyNumber_Clustering_CNMF_armlevel
1
0
0
0
0
2867
HistologicalType_Follicular-CopyNumber_Gistic2
0
0
0
1
0
2868
HistologicalType_Follicular-CopyNumber_Gistic2_Postprocess_Focal
0
0
0
0
1
2869
HistologicalType_Follicular-Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
2870
HistologicalType_Follicular-Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
2871
HistologicalType_Follicular-Correlate_Clinical_vs_CustomEvents
0
0
0
1
0
2872
HistologicalType_Follicular-Correlate_Clinical_vs_Methylation
0
0
0
1
0
2873
HistologicalType_Follicular-Correlate_Clinical_vs_miR
1
0
0
0
0
2874
HistologicalType_Follicular-Correlate_Clinical_vs_miRseq
0
0
0
1
0
2875
HistologicalType_Follicular-Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
2876
HistologicalType_Follicular-Correlate_Clinical_vs_mRNA
1
0
0
0
0
2877
HistologicalType_Follicular-Correlate_Clinical_vs_mRNAseq
0
0
0
1
0
2878
HistologicalType_Follicular-Correlate_Clinical_vs_Mutation
0
0
0
1
0
2879
HistologicalType_Follicular-Correlate_Clinical_vs_RPPA
0
0
0
1
0
2880
HistologicalType_Follicular-Correlate_CopyNumber_vs_miR
1
0
0
0
0
2881
HistologicalType_Follicular-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
2882
HistologicalType_Follicular-Correlate_CopyNumber_vs_mRNAseq
0
0
0
1
0
2883
HistologicalType_Follicular-Correlate_CustomClinical_vs_CopyNumber_Arm
0
0
0
1
0
2884
HistologicalType_Follicular-Correlate_CustomClinical_vs_CopyNumber_Focal
0
0
0
1
0
2885
HistologicalType_Follicular-Correlate_CustomClinical_vs_CustomEvents
0
0
0
1
0
2886
HistologicalType_Follicular-Correlate_CustomClinical_vs_Methylation
0
0
0
1
0
2887
HistologicalType_Follicular-Correlate_CustomClinical_vs_miRseq
0
0
0
1
0
2888
HistologicalType_Follicular-Correlate_CustomClinical_vs_Molecular_Subtypes
0
0
0
1
0
2889
HistologicalType_Follicular-Correlate_CustomClinical_vs_mRNAseq
0
0
0
1
0
2890
HistologicalType_Follicular-Correlate_CustomClinical_vs_Mutation
0
0
0
1
0
2891
HistologicalType_Follicular-Correlate_CustomClinical_vs_RPPA
0
0
0
1
0
2892
HistologicalType_Follicular-Correlate_Methylation_vs_mRNA
0
0
0
1
0
2893
HistologicalType_Follicular-Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
2894
HistologicalType_Follicular-Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
2895
HistologicalType_Follicular-Correlate_molecularSubtype_vs_Mutation
0
0
0
1
0
2896
HistologicalType_Follicular-expanded_coMutPlot
0
0
0
0
1
2897
HistologicalType_Follicular-GenerateStickFigures1.5
0
0
0
1
0
2898
HistologicalType_Follicular-GenerateStickFigures2.0
0
0
0
1
0
2899
HistologicalType_Follicular-GenerateStickFiguresCV
0
0
0
1
0
2900
HistologicalType_Follicular-GenerateStickFiguresMerged
0
0
0
1
0
2901
HistologicalType_Follicular-LegoPlotter1.5
0
0
0
1
0
2902
HistologicalType_Follicular-LegoPlotter2.0
0
0
0
1
0
2903
HistologicalType_Follicular-LegoPlotterCV
0
0
0
1
0
2904
HistologicalType_Follicular-LegoPlotterMerged
0
0
0
1
0
2905
HistologicalType_Follicular-MergeMutSigRunResults
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0
0
1
0
2906
HistologicalType_Follicular-Methylation_Clustering_CNMF
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0
0
1
0
2907
HistologicalType_Follicular-Methylation_Preprocess
0
0
0
1
0
2908
HistologicalType_Follicular-miRseq_Clustering_CNMF
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0
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1
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2909
HistologicalType_Follicular-miRseq_Clustering_Consensus
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0
0
1
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2910
HistologicalType_Follicular-miRseq_Mature_Clustering_CNMF
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1
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2911
HistologicalType_Follicular-miRseq_Mature_Clustering_Consensus
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0
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1
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2912
HistologicalType_Follicular-miRseq_Mature_Preprocess
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0
0
1
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2913
HistologicalType_Follicular-miRseq_Preprocess
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0
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2914
HistologicalType_Follicular-miR_Clustering_CNMF
1
0
0
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0
2915
HistologicalType_Follicular-miR_Clustering_Consensus
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0
2916
HistologicalType_Follicular-miR_FindDirectTargets
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0
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2917
HistologicalType_Follicular-mRNAseq_Clustering_CNMF
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1
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2918
HistologicalType_Follicular-mRNAseq_Clustering_Consensus
0
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0
1
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2919
HistologicalType_Follicular-mRNA_Clustering_CNMF
1
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2920
HistologicalType_Follicular-mRNA_Clustering_Consensus
1
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2921
HistologicalType_Follicular-mRNA_Preprocess_Median
1
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2922
HistologicalType_Follicular-Mutation_Assessor
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2923
HistologicalType_Follicular-MutSigNozzleReport1.5
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0
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2924
HistologicalType_Follicular-MutSigNozzleReport2.0
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2925
HistologicalType_Follicular-MutSigNozzleReportCV
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2926
HistologicalType_Follicular-MutSigNozzleReportMerged
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2927
HistologicalType_Follicular-MutSigPreprocess1.5
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2928
HistologicalType_Follicular-MutSigPreprocess2.0
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2929
HistologicalType_Follicular-MutSigRun1.5
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2930
HistologicalType_Follicular-MutSigRun2.0
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2931
HistologicalType_Follicular-MutSigRunCV
0
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2932
HistologicalType_Follicular-ParadigmPreprocess_mRNA
1
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2933
HistologicalType_Follicular-ParadigmPreprocess_RNASeq
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2934
HistologicalType_Follicular-Paradigm_mRNA
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2935
HistologicalType_Follicular-Paradigm_mRNA_And_CopyNumber
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2936
HistologicalType_Follicular-Paradigm_Prepare_mRNA
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2937
HistologicalType_Follicular-Paradigm_Prepare_mRNA_And_Copy_Number
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2938
HistologicalType_Follicular-Paradigm_Prepare_RNASeq
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2939
HistologicalType_Follicular-Paradigm_Prepare_RNASeq_And_Copy_Number
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2940
HistologicalType_Follicular-Paradigm_Preprocess_mRNA
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2941
HistologicalType_Follicular-Paradigm_Preprocess_mRNA_And_Copy_Number
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2942
HistologicalType_Follicular-Paradigm_Preprocess_RNASeq
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2943
HistologicalType_Follicular-Paradigm_Preprocess_RNASeq_And_Copy_Number
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2944
HistologicalType_Follicular-Paradigm_Report_Preprocess_mRNA
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2945
HistologicalType_Follicular-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
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2946
HistologicalType_Follicular-Paradigm_Report_Preprocess_RNASeq
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2947
HistologicalType_Follicular-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
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2948
HistologicalType_Follicular-Paradigm_RNASeq
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2949
HistologicalType_Follicular-Paradigm_RNASeq_And_Copy_Number
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2950
HistologicalType_Follicular-Pathway_FindEnrichedGenes
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2951
HistologicalType_Follicular-Pathway_Hotnet
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2952
HistologicalType_Follicular-Pathway_Paradigm_mRNA
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2953
HistologicalType_Follicular-Pathway_Paradigm_mRNA_And_Copy_Number
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2954
HistologicalType_Follicular-Pathway_Paradigm_RNASeq
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2955
HistologicalType_Follicular-Pathway_Paradigm_RNASeq_And_Copy_Number
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2956
HistologicalType_Follicular-ProcessCoverageForMutSig1.5
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2957
HistologicalType_Follicular-ProcessCoverageForMutSig2.0
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2958
HistologicalType_Follicular-RPPA_Clustering_CNMF
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2959
HistologicalType_Follicular-RPPA_Clustering_Consensus
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2960
HistologicalType_Follicular-Clinical_Pick_Tier1
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2961
HistologicalType_Follicular-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
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2962
HistologicalType_Follicular-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
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2963
HistologicalType_Follicular-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
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2964
HistologicalType_Follicular-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
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2965
HistologicalType_Follicular-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
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2966
HistologicalType_Follicular-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT
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2967
HistologicalType_Follicular-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
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2968
HistologicalType_Follicular-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
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2969
HistologicalType_Follicular-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
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2970
HistologicalType_Follicular-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
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2971
HistologicalType_Follicular-Merge_Clinical
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2972
HistologicalType_Follicular-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data
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2973
HistologicalType_Follicular-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
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2974
HistologicalType_Follicular-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data
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2975
HistologicalType_Follicular-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg
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2976
HistologicalType_Follicular-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data
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2977
HistologicalType_Follicular-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
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2978
HistologicalType_Follicular-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data
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2979
HistologicalType_Follicular-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
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2980
HistologicalType_Follicular-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg
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2981
HistologicalType_Follicular-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data
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2982
HistologicalType_Follicular-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data
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2983
HistologicalType_Follicular-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data
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2984
HistologicalType_Follicular-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
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2985
HistologicalType_Follicular-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
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2986
HistologicalType_Follicular-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
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0
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2987
HistologicalType_Follicular-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
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2988
HistologicalType_Follicular-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
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2989
HistologicalType_Follicular-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
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2990
HistologicalType_Follicular-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data
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2991
HistologicalType_Follicular-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
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2992
HistologicalType_Follicular-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data
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2993
HistologicalType_Follicular-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
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2994
HistologicalType_Follicular-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data
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2995
HistologicalType_Follicular-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data
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2996
HistologicalType_Follicular-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data
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2997
HistologicalType_Follicular-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data
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2998
HistologicalType_Follicular-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data
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2999
HistologicalType_Follicular-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
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3000
HistologicalType_Follicular-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
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3001
HistologicalType_Follicular-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
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3002
HistologicalType_Follicular-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data
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3003
HistologicalType_Follicular-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data
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3004
HistologicalType_Follicular-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data
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3005
HistologicalType_Follicular-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data
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3006
HistologicalType_Follicular-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data
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3007
HistologicalType_Follicular-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data
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3008
HistologicalType_Follicular-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data
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3009
HistologicalType_Follicular-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
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0
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3010
HistologicalType_Follicular-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data
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0
0
3011
HistologicalType_Follicular-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data
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0
0
3012
HistologicalType_Follicular-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data
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0
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3013
HistologicalType_Follicular-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data
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0
3014
HistologicalType_Follicular-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data
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3015
HistologicalType_Follicular-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data
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3016
HistologicalType_Follicular-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data
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3017
HistologicalType_Follicular-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data
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3018
HistologicalType_Follicular-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data
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3019
HistologicalType_Follicular-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data
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3020
HistologicalType_Follicular-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed
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3021
HistologicalType_Follicular-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data
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3022
HistologicalType_Follicular-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data
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3023
HistologicalType_Follicular-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data
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3024
HistologicalType_Follicular-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data
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3025
HistologicalType_Follicular-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg
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3026
HistologicalType_Follicular-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg
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3027
HistologicalType_Follicular-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg
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3028
HistologicalType_Follicular-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg
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3029
HistologicalType_Follicular-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data
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3030
HistologicalType_Follicular-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data
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HistologicalType_Follicular-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
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HistologicalType_Follicular-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data
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HistologicalType_Follicular-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data
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HistologicalType_Follicular-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data
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3035
HistologicalType_Follicular-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data
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3036
HistologicalType_Follicular-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
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3037
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3038
HistologicalType_Follicular-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
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3039
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HistologicalType_Follicular-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
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HistologicalType_Follicular-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data
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HistologicalType_Follicular-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data
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HistologicalType_Follicular-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
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3047
HistologicalType_Follicular-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
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3048
HistologicalType_Follicular-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
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3049
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3050
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3051
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3052
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3053
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HistologicalType_Follicular-Mutation_Packager_Calls
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3059
HistologicalType_Follicular-Mutation_Packager_Coverage
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1
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3060
HistologicalType_Follicular-RPPA_AnnotateWithGene
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1
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3061
HistologicalType_Classical-Add_CustomClinical
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3062
HistologicalType_Classical-Add_CustomEvents
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3063
HistologicalType_Classical-Aggregate_Gene_Status
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3064
HistologicalType_Classical-Aggregate_Molecular_Subtype_Clusters
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3065
HistologicalType_Classical-CoMut1.5
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3066
HistologicalType_Classical-CoMut2.0
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3067
HistologicalType_Classical-CoMutCV
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3068
HistologicalType_Classical-CoMutMerged
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3069
HistologicalType_Classical-CopyNumber_Clustering_CNMF
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3070
HistologicalType_Classical-CopyNumber_Clustering_CNMF_armlevel
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3071
HistologicalType_Classical-CopyNumber_Gistic2
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3072
HistologicalType_Classical-CopyNumber_Gistic2_Postprocess_Focal
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3073
HistologicalType_Classical-Correlate_Clinical_vs_CopyNumber_Arm
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3074
HistologicalType_Classical-Correlate_Clinical_vs_CopyNumber_Focal
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3075
HistologicalType_Classical-Correlate_Clinical_vs_CustomEvents
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3076
HistologicalType_Classical-Correlate_Clinical_vs_Methylation
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3077
HistologicalType_Classical-Correlate_Clinical_vs_miR
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3078
HistologicalType_Classical-Correlate_Clinical_vs_miRseq
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3079
HistologicalType_Classical-Correlate_Clinical_vs_Molecular_Subtypes
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3080
HistologicalType_Classical-Correlate_Clinical_vs_mRNA
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3081
HistologicalType_Classical-Correlate_Clinical_vs_mRNAseq
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3082
HistologicalType_Classical-Correlate_Clinical_vs_Mutation
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3083
HistologicalType_Classical-Correlate_Clinical_vs_RPPA
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1
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3084
HistologicalType_Classical-Correlate_CopyNumber_vs_miR
1
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3085
HistologicalType_Classical-Correlate_CopyNumber_vs_mRNA
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3086
HistologicalType_Classical-Correlate_CopyNumber_vs_mRNAseq
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3087
HistologicalType_Classical-Correlate_CustomClinical_vs_CopyNumber_Arm
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3088
HistologicalType_Classical-Correlate_CustomClinical_vs_CopyNumber_Focal
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3089
HistologicalType_Classical-Correlate_CustomClinical_vs_CustomEvents
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3090
HistologicalType_Classical-Correlate_CustomClinical_vs_Methylation
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3091
HistologicalType_Classical-Correlate_CustomClinical_vs_miRseq
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3092
HistologicalType_Classical-Correlate_CustomClinical_vs_Molecular_Subtypes
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3093
HistologicalType_Classical-Correlate_CustomClinical_vs_mRNAseq
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3094
HistologicalType_Classical-Correlate_CustomClinical_vs_Mutation
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3095
HistologicalType_Classical-Correlate_CustomClinical_vs_RPPA
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3096
HistologicalType_Classical-Correlate_Methylation_vs_mRNA
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3097
HistologicalType_Classical-Correlate_molecularSubtype_vs_CopyNumber_Arm
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3098
HistologicalType_Classical-Correlate_molecularSubtype_vs_CopyNumber_Focal
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3099
HistologicalType_Classical-Correlate_molecularSubtype_vs_Mutation
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3100
HistologicalType_Classical-expanded_coMutPlot
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3101
HistologicalType_Classical-GenerateStickFigures1.5
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HistologicalType_Classical-GenerateStickFigures2.0
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HistologicalType_Classical-GenerateStickFiguresCV
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3104
HistologicalType_Classical-GenerateStickFiguresMerged
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3105
HistologicalType_Classical-LegoPlotter1.5
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3106
HistologicalType_Classical-LegoPlotter2.0
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3107
HistologicalType_Classical-LegoPlotterCV
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3108
HistologicalType_Classical-LegoPlotterMerged
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3109
HistologicalType_Classical-MergeMutSigRunResults
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3110
HistologicalType_Classical-Methylation_Clustering_CNMF
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3111
HistologicalType_Classical-Methylation_Preprocess
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3112
HistologicalType_Classical-miRseq_Clustering_CNMF
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3113
HistologicalType_Classical-miRseq_Clustering_Consensus
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3114
HistologicalType_Classical-miRseq_Mature_Clustering_CNMF
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3115
HistologicalType_Classical-miRseq_Mature_Clustering_Consensus
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3116
HistologicalType_Classical-miRseq_Mature_Preprocess
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HistologicalType_Classical-miRseq_Preprocess
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HistologicalType_Classical-miR_Clustering_CNMF
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3119
HistologicalType_Classical-miR_Clustering_Consensus
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3120
HistologicalType_Classical-miR_FindDirectTargets
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HistologicalType_Classical-mRNAseq_Clustering_CNMF
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HistologicalType_Classical-mRNAseq_Clustering_Consensus
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HistologicalType_Classical-mRNA_Clustering_CNMF
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HistologicalType_Classical-mRNA_Clustering_Consensus
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HistologicalType_Classical-mRNA_Preprocess_Median
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HistologicalType_Classical-Mutation_Assessor
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HistologicalType_Classical-MutSigNozzleReport1.5
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HistologicalType_Classical-MutSigNozzleReport2.0
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3129
HistologicalType_Classical-MutSigNozzleReportCV
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3130
HistologicalType_Classical-MutSigNozzleReportMerged
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3131
HistologicalType_Classical-MutSigPreprocess1.5
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HistologicalType_Classical-MutSigPreprocess2.0
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HistologicalType_Classical-MutSigRun1.5
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HistologicalType_Classical-MutSigRun2.0
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3135
HistologicalType_Classical-MutSigRunCV
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HistologicalType_Classical-ParadigmPreprocess_mRNA
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3137
HistologicalType_Classical-ParadigmPreprocess_RNASeq
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HistologicalType_Classical-Paradigm_mRNA
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HistologicalType_Classical-Paradigm_mRNA_And_CopyNumber
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HistologicalType_Classical-Paradigm_Prepare_mRNA
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3141
HistologicalType_Classical-Paradigm_Prepare_mRNA_And_Copy_Number
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3142
HistologicalType_Classical-Paradigm_Prepare_RNASeq
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HistologicalType_Classical-Paradigm_Preprocess_mRNA
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HistologicalType_Classical-Paradigm_Preprocess_mRNA_And_Copy_Number
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HistologicalType_Classical-Paradigm_Preprocess_RNASeq
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HistologicalType_Classical-Paradigm_Preprocess_RNASeq_And_Copy_Number
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HistologicalType_Classical-Paradigm_Report_Preprocess_mRNA
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3149
HistologicalType_Classical-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
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HistologicalType_Classical-Paradigm_Report_Preprocess_RNASeq
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HistologicalType_Classical-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
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HistologicalType_Classical-Paradigm_RNASeq
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HistologicalType_Classical-Paradigm_RNASeq_And_Copy_Number
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HistologicalType_Classical-Pathway_FindEnrichedGenes
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HistologicalType_Classical-Pathway_Hotnet
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HistologicalType_Classical-Pathway_Paradigm_mRNA
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HistologicalType_Classical-Pathway_Paradigm_mRNA_And_Copy_Number
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HistologicalType_Classical-Pathway_Paradigm_RNASeq
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HistologicalType_Classical-Pathway_Paradigm_RNASeq_And_Copy_Number
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HistologicalType_Classical-ProcessCoverageForMutSig1.5
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3161
HistologicalType_Classical-ProcessCoverageForMutSig2.0
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3162
HistologicalType_Classical-RPPA_Clustering_CNMF
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HistologicalType_Classical-RPPA_Clustering_Consensus
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HistologicalType_Classical-Clinical_Pick_Tier1
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HistologicalType_Classical-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB
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HistologicalType_Classical-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT
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HistologicalType_Classical-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB
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HistologicalType_Classical-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT
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HistologicalType_Classical-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB
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3170
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HistologicalType_Classical-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB
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HistologicalType_Classical-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT
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HistologicalType_Classical-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB
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HistologicalType_Classical-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT
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HistologicalType_Classical-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg
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HistologicalType_Classical-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg
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HistologicalType_Classical-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg
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HistologicalType_Classical-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
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HistologicalType_Classical-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
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HistologicalType_Classical-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data
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HistologicalType_Classical-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data
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HistologicalType_Classical-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data
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3200
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1
0
0
0
0
3235
HistologicalType_Classical-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
1
0
0
0
0
3236
HistologicalType_Classical-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data
1
0
0
0
0
3237
HistologicalType_Classical-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data
1
0
0
0
0
3238
HistologicalType_Classical-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data
1
0
0
0
0
3239
HistologicalType_Classical-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data
1
0
0
0
0
3240
HistologicalType_Classical-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
3241
HistologicalType_Classical-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
3242
HistologicalType_Classical-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
3243
HistologicalType_Classical-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data
1
0
0
0
0
3244
HistologicalType_Classical-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data
1
0
0
0
0
3245
HistologicalType_Classical-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data
1
0
0
0
0
3246
HistologicalType_Classical-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data
1
0
0
0
0
3247
HistologicalType_Classical-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data
1
0
0
0
0
3248
HistologicalType_Classical-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data
1
0
0
0
0
3249
HistologicalType_Classical-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data
1
0
0
0
0
3250
HistologicalType_Classical-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg
1
0
0
0
0
3251
HistologicalType_Classical-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg
1
0
0
0
0
3252
HistologicalType_Classical-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg
1
0
0
0
0
3253
HistologicalType_Classical-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
3254
HistologicalType_Classical-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
3255
HistologicalType_Classical-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
3256
HistologicalType_Classical-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
3257
HistologicalType_Classical-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data
1
0
0
0
0
3258
HistologicalType_Classical-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data
1
0
0
0
0
3259
HistologicalType_Classical-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data
1
0
0
0
0
3260
HistologicalType_Classical-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data
1
0
0
0
0
3261
HistologicalType_Classical-mRNAseq_Preprocess
0
0
0
1
0
3262
HistologicalType_Classical-Mutation_Packager_Calls
0
0
0
1
0
3263
HistologicalType_Classical-Mutation_Packager_Coverage
0
0
0
1
0
3264
HistologicalType_Classical-RPPA_AnnotateWithGene
0
0
0
1
0
Total
1949
3
1
1276
35
This table generated on Wed Oct 16 05:33:28 2013