Broad GDAC dev Run Status : GBMLGG

Cohort	BCR	Clinical	CN	LowP	Methylation	mRNA	mRNASeq	miR	miRSeq	RPPA	MAF	rawMAF
GBMLGG	1129	1110	1090	52	936	567	676	565	512	668	576	806

Note that the links below require Broad internal Firehose login credentials.

	Pipeline	NotRunnable	Runnable	Successful	Unsuccessful
1	Aggregate_AnalysisFeatures	0	0	0	1
2	Aggregate_Molecular_Subtype_Clusters	0	0	1	0
3	CopyNumber_Clustering_CNMF	0	0	1	0
4	CopyNumber_Clustering_CNMF_thresholded	0	0	1	0
5	CopyNumber_Gistic2	0	0	1	0
6	CopyNumber_Gistic2_Postprocess_Focal	0	0	1	0
7	Correlate_Clinical_vs_CopyNumber_Arm	0	0	1	0
8	Correlate_Clinical_vs_CopyNumber_Focal	0	0	1	0
9	Correlate_Clinical_vs_Methylation	1	0	0	0
10	Correlate_Clinical_vs_miR	0	1	0	0
11	Correlate_Clinical_vs_Molecular_Subtypes	0	0	1	0
12	Correlate_Clinical_vs_mRNA	0	0	1	0
13	Correlate_Clinical_vs_Mutation	1	0	0	0
14	Correlate_CopyNumber_vs_miR	0	0	1	0
15	Correlate_CopyNumber_vs_mRNA	0	0	1	0
16	Correlate_Methylation_vs_mRNA	1	0	0	0
17	Correlate_molecularSubtype_vs_CopyNumber_Arm	0	0	1	0
18	Correlate_molecularSubtype_vs_CopyNumber_Focal	0	0	1	0
19	Methylation_Clustering_CNMF	1	0	0	0
20	Methylation_Preprocess	1	0	0	0
21	miR_FindDirectTargets	0	0	1	0
22	miR_Mature_Clustering_CNMF	0	0	1	0
23	miR_Mature_Clustering_Consensus_Plus	0	0	1	0
24	miR_Mature_Preprocess	0	0	1	0
25	mRNA_lincRNA_Clustering_Consensus_Plus	0	0	1	0
26	mRNA_lincRNA_CNMF	0	0	1	0
27	mRNA_Preprocess	0	0	1	0
28	mRNA_protein_coding_Clustering_CNMF	0	0	1	0
29	mRNA_protein_coding_Clustering_Consensus_Plus	0	0	1	0
30	Mutation_APOBEC	0	1	0	0
31	Mutation_CoOccurrence	1	0	0	0
32	Mutation_Signature	0	1	0	0
33	Pathway_GSEA_mRNA	0	0	1	0
34	Aggregate_AnalysisFeatures	0	0	1	0
35	Aggregate_Molecular_Subtype_Clusters	0	0	1	0
36	CopyNumber_Clustering_CNMF	1	0	0	0
37	CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
38	CopyNumber_Gistic2	0	0	1	0
39	CopyNumber_Gistic2_Postprocess_Focal	0	0	1	0
40	Correlate_Clinical_vs_CopyNumber_Arm	0	0	1	0
41	Correlate_Clinical_vs_CopyNumber_Focal	0	0	1	0
42	Correlate_Clinical_vs_Methylation	1	0	0	0
43	Correlate_Clinical_vs_miR	1	0	0	0
44	Correlate_Clinical_vs_Molecular_Subtypes	0	0	1	0
45	Correlate_Clinical_vs_mRNA	0	0	1	0
46	Correlate_Clinical_vs_Mutation	1	0	0	0
47	Correlate_CopyNumber_vs_miR	1	0	0	0
48	Correlate_CopyNumber_vs_mRNA	0	0	1	0
49	Correlate_Methylation_vs_mRNA	1	0	0	0
50	Correlate_molecularSubtype_vs_CopyNumber_Arm	0	0	1	0
51	Correlate_molecularSubtype_vs_CopyNumber_Focal	0	0	1	0
52	Methylation_Clustering_CNMF	1	0	0	0
53	Methylation_Preprocess	1	0	0	0
54	miR_FindDirectTargets	1	0	0	0
55	miR_Mature_Clustering_CNMF	1	0	0	0
56	miR_Mature_Clustering_Consensus_Plus	1	0	0	0
57	miR_Mature_Preprocess	0	0	1	0
58	mRNA_lincRNA_Clustering_Consensus_Plus	0	0	0	1
59	mRNA_lincRNA_CNMF	0	0	0	1
60	mRNA_Preprocess	0	0	1	0
61	mRNA_protein_coding_Clustering_CNMF	0	0	0	1
62	mRNA_protein_coding_Clustering_Consensus_Plus	0	0	0	1
63	Mutation_APOBEC	0	1	0	0
64	Mutation_CoOccurrence	0	0	1	0
65	Mutation_Signature	0	1	0	0
66	Pathway_GSEA_mRNA	0	0	1	0
67	Aggregate_AnalysisFeatures	0	0	1	0
68	Aggregate_Molecular_Subtype_Clusters	0	0	1	0
69	CopyNumber_Clustering_CNMF	0	0	1	0
70	CopyNumber_Clustering_CNMF_thresholded	0	0	1	0
71	CopyNumber_Gistic2	0	0	1	0
72	CopyNumber_Gistic2_Postprocess_Focal	0	0	1	0
73	Correlate_Clinical_vs_CopyNumber_Arm	0	0	1	0
74	Correlate_Clinical_vs_CopyNumber_Focal	0	0	1	0
75	Correlate_Clinical_vs_Methylation	1	0	0	0
76	Correlate_Clinical_vs_miR	0	1	0	0
77	Correlate_Clinical_vs_Molecular_Subtypes	0	0	1	0
78	Correlate_Clinical_vs_mRNA	0	0	1	0
79	Correlate_Clinical_vs_Mutation	1	0	0	0
80	Correlate_CopyNumber_vs_miR	0	0	1	0
81	Correlate_CopyNumber_vs_mRNA	0	0	1	0
82	Correlate_Methylation_vs_mRNA	1	0	0	0
83	Correlate_molecularSubtype_vs_CopyNumber_Arm	0	0	1	0
84	Correlate_molecularSubtype_vs_CopyNumber_Focal	0	0	1	0
85	Methylation_Clustering_CNMF	1	0	0	0
86	Methylation_Preprocess	1	0	0	0
87	miR_FindDirectTargets	0	0	1	0
88	miR_Mature_Clustering_CNMF	0	0	1	0
89	miR_Mature_Clustering_Consensus_Plus	0	0	1	0
90	miR_Mature_Preprocess	0	0	1	0
91	mRNA_lincRNA_Clustering_Consensus_Plus	0	0	1	0
92	mRNA_lincRNA_CNMF	0	0	1	0
93	mRNA_Preprocess	0	0	1	0
94	mRNA_protein_coding_Clustering_CNMF	0	0	1	0
95	mRNA_protein_coding_Clustering_Consensus_Plus	0	0	1	0
96	Mutation_APOBEC	0	1	0	0
97	Mutation_CoOccurrence	0	0	1	0
98	Mutation_Signature	0	1	0	0
99	Pathway_GSEA_mRNA	0	0	1	0
100	Aggregate_AnalysisFeatures	0	1	0	0
101	Aggregate_Molecular_Subtype_Clusters	1	0	0	0
102	CopyNumber_Clustering_CNMF	1	0	0	0
103	CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
104	CopyNumber_Gistic2	0	0	0	1
105	CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
106	Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
107	Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
108	Correlate_Clinical_vs_Methylation	1	0	0	0
109	Correlate_Clinical_vs_miR	1	0	0	0
110	Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
111	Correlate_Clinical_vs_mRNA	0	0	0	1
112	Correlate_Clinical_vs_Mutation	1	0	0	0
113	Correlate_CopyNumber_vs_miR	1	0	0	0
114	Correlate_CopyNumber_vs_mRNA	1	0	0	0
115	Correlate_Methylation_vs_mRNA	1	0	0	0
116	Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
117	Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
118	Methylation_Clustering_CNMF	1	0	0	0
119	Methylation_Preprocess	1	0	0	0
120	miR_FindDirectTargets	1	0	0	0
121	miR_Mature_Clustering_CNMF	1	0	0	0
122	miR_Mature_Clustering_Consensus_Plus	1	0	0	0
123	miR_Mature_Preprocess	0	0	1	0
124	mRNA_lincRNA_Clustering_Consensus_Plus	0	0	0	1
125	mRNA_lincRNA_CNMF	0	0	0	1
126	mRNA_Preprocess	0	0	1	0
127	mRNA_protein_coding_Clustering_CNMF	0	0	0	1
128	mRNA_protein_coding_Clustering_Consensus_Plus	0	0	0	1
129	Mutation_APOBEC	1	0	0	0
130	Mutation_CoOccurrence	1	0	0	0
131	Mutation_Signature	1	0	0	0
132	Pathway_GSEA_mRNA	1	0	0	0
133	Aggregate_AnalysisFeatures	0	1	0	0
134	Aggregate_Molecular_Subtype_Clusters	1	0	0	0
135	CopyNumber_Clustering_CNMF	1	0	0	0
136	CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
137	CopyNumber_Gistic2	0	0	0	1
138	CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
139	Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
140	Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
141	Correlate_Clinical_vs_Methylation	1	0	0	0
142	Correlate_Clinical_vs_miR	1	0	0	0
143	Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
144	Correlate_Clinical_vs_mRNA	1	0	0	0
145	Correlate_Clinical_vs_Mutation	1	0	0	0
146	Correlate_CopyNumber_vs_miR	1	0	0	0
147	Correlate_CopyNumber_vs_mRNA	1	0	0	0
148	Correlate_Methylation_vs_mRNA	1	0	0	0
149	Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
150	Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
151	Methylation_Clustering_CNMF	1	0	0	0
152	Methylation_Preprocess	1	0	0	0
153	miR_FindDirectTargets	1	0	0	0
154	miR_Mature_Clustering_CNMF	1	0	0	0
155	miR_Mature_Clustering_Consensus_Plus	1	0	0	0
156	miR_Mature_Preprocess	1	0	0	0
157	mRNA_lincRNA_Clustering_Consensus_Plus	1	0	0	0
158	mRNA_lincRNA_CNMF	1	0	0	0
159	mRNA_Preprocess	1	0	0	0
160	mRNA_protein_coding_Clustering_CNMF	1	0	0	0
161	mRNA_protein_coding_Clustering_Consensus_Plus	1	0	0	0
162	Mutation_APOBEC	1	0	0	0
163	Mutation_CoOccurrence	1	0	0	0
164	Mutation_Signature	1	0	0	0
165	Pathway_GSEA_mRNA	1	0	0	0
166	Aggregate_AnalysisFeatures	0	1	0	0
167	Aggregate_Molecular_Subtype_Clusters	1	0	0	0
168	CopyNumber_Clustering_CNMF	1	0	0	0
169	CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
170	CopyNumber_Gistic2	0	0	0	1
171	CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
172	Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
173	Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
174	Correlate_Clinical_vs_Methylation	1	0	0	0
175	Correlate_Clinical_vs_miR	1	0	0	0
176	Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
177	Correlate_Clinical_vs_mRNA	1	0	0	0
178	Correlate_Clinical_vs_Mutation	1	0	0	0
179	Correlate_CopyNumber_vs_miR	1	0	0	0
180	Correlate_CopyNumber_vs_mRNA	1	0	0	0
181	Correlate_Methylation_vs_mRNA	1	0	0	0
182	Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
183	Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
184	Methylation_Clustering_CNMF	1	0	0	0
185	Methylation_Preprocess	1	0	0	0
186	miR_FindDirectTargets	1	0	0	0
187	miR_Mature_Clustering_CNMF	1	0	0	0
188	miR_Mature_Clustering_Consensus_Plus	1	0	0	0
189	miR_Mature_Preprocess	1	0	0	0
190	mRNA_lincRNA_Clustering_Consensus_Plus	1	0	0	0
191	mRNA_lincRNA_CNMF	1	0	0	0
192	mRNA_Preprocess	1	0	0	0
193	mRNA_protein_coding_Clustering_CNMF	1	0	0	0
194	mRNA_protein_coding_Clustering_Consensus_Plus	1	0	0	0
195	Mutation_APOBEC	1	0	0	0
196	Mutation_CoOccurrence	1	0	0	0
197	Mutation_Signature	1	0	0	0
198	Pathway_GSEA_mRNA	1	0	0	0
199	Aggregate_AnalysisFeatures	0	1	0	0
200	Aggregate_Gene_Status	1	0	0	0
201	Aggregate_Molecular_Subtype_Clusters	0	1	0	0
202	Append_CustomClinical	0	1	0	0
203	CoMut2.0	1	0	0	0
204	CoMut2CV	1	0	0	0
205	CoMutCV	1	0	0	0
206	CopyNumber_Clustering_CNMF	1	0	0	0
207	CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
208	CopyNumber_Gistic2	0	1	0	0
209	CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
210	CopyNumberLowPass_Gistic2	0	1	0	0
211	Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
212	Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
213	Correlate_Clinical_vs_Methylation	1	0	0	0
214	Correlate_Clinical_vs_miR	1	0	0	0
215	Correlate_Clinical_vs_miRseq	1	0	0	0
216	Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
217	Correlate_Clinical_vs_mRNA	1	0	0	0
218	Correlate_Clinical_vs_mRNAseq	1	0	0	0
219	Correlate_Clinical_vs_Mutation	1	0	0	0
220	Correlate_Clinical_vs_Mutation_APOBEC_Categorical	1	0	0	0
221	Correlate_Clinical_vs_Mutation_APOBEC_Continuous	1	0	0	0
222	Correlate_Clinical_vs_MutationRate	1	0	0	0
223	Correlate_Clinical_vs_RPPA	1	0	0	0
224	Correlate_CopyNumber_vs_miR	1	0	0	0
225	Correlate_CopyNumber_vs_mRNA	1	0	0	0
226	Correlate_CopyNumber_vs_mRNAseq	1	0	0	0
227	Correlate_Methylation_vs_mRNA	0	1	0	0
228	Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
229	Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
230	Correlate_molecularSubtype_vs_Mutation	1	0	0	0
231	Correlate_mRNAseq_vs_Mutation_APOBEC	1	0	0	0
232	GenerateStickFigures2.0	1	0	0	0
233	GenerateStickFigures2CV	1	0	0	0
234	GenerateStickFiguresCV	1	0	0	0
235	iClusterPlus	1	0	0	0
236	LegoPlotter2.0	1	0	0	0
237	LegoPlotter2CV	1	0	0	0
238	LegoPlotterCV	1	0	0	0
239	Methylation_Clustering_CNMF	0	1	0	0
240	miR_Clustering_CNMF	0	1	0	0
241	miR_Clustering_Consensus_Plus	0	1	0	0
242	miR_FindDirectTargets	0	1	0	0
243	miRseq_Clustering_CNMF	0	1	0	0
244	miRseq_Clustering_Consensus_Plus	0	1	0	0
245	miRseq_FindDirectTargets	0	1	0	0
246	miRseq_Mature_Clustering_CNMF	0	1	0	0
247	miRseq_Mature_Clustering_Consensus_Plus	0	1	0	0
248	mRNA_Clustering_CNMF	0	1	0	0
249	mRNA_Clustering_Consensus_Plus	0	1	0	0
250	mRNAseq_Clustering_CNMF	0	1	0	0
251	mRNAseq_Clustering_Consensus_Plus	0	0	1	0
252	Mutation_APOBEC	1	0	0	0
253	Mutation_Assessor	1	0	0	0
254	Mutation_CHASM	1	0	0	0
255	Mutation_CoOccurrence	1	0	0	0
256	Mutation_CoOccurrence_Custom	1	0	0	0
257	MutSigNozzleReport2.0	1	0	0	0
258	MutSigNozzleReport2CV	1	0	0	0
259	MutSigNozzleReportCV	1	0	0	0
260	MutSigPreprocess2.0	1	0	0	0
261	MutSigRun2.0	1	0	0	0
262	MutSigRun2CV	1	0	0	0
263	MutSigRunCV	1	0	0	0
264	Paradigm_mRNA	1	0	0	0
265	Paradigm_mRNA_And_CopyNumber	1	0	0	0
266	Paradigm_Prepare_mRNA	1	0	0	0
267	Paradigm_Prepare_mRNA_And_Copy_Number	1	0	0	0
268	Paradigm_Prepare_RNASeq	1	0	0	0
269	Paradigm_Prepare_RNASeq_And_Copy_Number	1	0	0	0
270	ParadigmPreprocess_mRNA	0	1	0	0
271	Paradigm_Preprocess_mRNA	1	0	0	0
272	Paradigm_Preprocess_mRNA_And_Copy_Number	1	0	0	0
273	ParadigmPreprocess_RNASeq	0	1	0	0
274	Paradigm_Preprocess_RNASeq	1	0	0	0
275	Paradigm_Preprocess_RNASeq_And_Copy_Number	1	0	0	0
276	Paradigm_Report_Preprocess_mRNA	1	0	0	0
277	Paradigm_Report_Preprocess_mRNA_And_CopyNumber	1	0	0	0
278	Paradigm_Report_Preprocess_RNASeq	1	0	0	0
279	Paradigm_Report_Preprocess_RNASeq_And_Copy_Number	1	0	0	0
280	Paradigm_RNASeq	1	0	0	0
281	Paradigm_RNASeq_And_Copy_Number	1	0	0	0
282	Pathway_FindEnrichedGenes	1	0	0	0
283	Pathway_GSEA_mRNAseq	1	0	0	0
284	Pathway_Hotnet	1	0	0	0
285	Pathway_Overlaps_MSigDB_MutSig2CV	1	0	0	0
286	Pathway_Paradigm_mRNA	1	0	0	0
287	Pathway_Paradigm_mRNA_And_Copy_Number	1	0	0	0
288	Pathway_Paradigm_RNASeq	1	0	0	0
289	Pathway_Paradigm_RNASeq_And_Copy_Number	1	0	0	0
290	ProcessCoverageForMutSig2.0	1	0	0	0
291	RPPA_Clustering_CNMF	0	1	0	0
292	RPPA_Clustering_Consensus_Plus	0	1	0	0
293	TR-Aggregate_AnalysisFeatures	0	1	0	0
294	TR-Aggregate_Gene_Status	1	0	0	0
295	TR-Aggregate_Molecular_Subtype_Clusters	0	1	0	0
296	TR-Append_CustomClinical	0	1	0	0
297	TR-CoMut2.0	1	0	0	0
298	TR-CoMut2CV	1	0	0	0
299	TR-CoMutCV	1	0	0	0
300	TR-CopyNumber_Clustering_CNMF	1	0	0	0
301	TR-CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
302	TR-CopyNumber_Gistic2	0	1	0	0
303	TR-CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
304	TR-CopyNumberLowPass_Gistic2	1	0	0	0
305	TR-Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
306	TR-Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
307	TR-Correlate_Clinical_vs_Methylation	1	0	0	0
308	TR-Correlate_Clinical_vs_miR	1	0	0	0
309	TR-Correlate_Clinical_vs_miRseq	1	0	0	0
310	TR-Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
311	TR-Correlate_Clinical_vs_mRNA	1	0	0	0
312	TR-Correlate_Clinical_vs_mRNAseq	1	0	0	0
313	TR-Correlate_Clinical_vs_Mutation	1	0	0	0
314	TR-Correlate_Clinical_vs_Mutation_APOBEC_Categorical	1	0	0	0
315	TR-Correlate_Clinical_vs_Mutation_APOBEC_Continuous	1	0	0	0
316	TR-Correlate_Clinical_vs_MutationRate	1	0	0	0
317	TR-Correlate_Clinical_vs_RPPA	1	0	0	0
318	TR-Correlate_CopyNumber_vs_miR	1	0	0	0
319	TR-Correlate_CopyNumber_vs_mRNA	1	0	0	0
320	TR-Correlate_CopyNumber_vs_mRNAseq	1	0	0	0
321	TR-Correlate_Methylation_vs_mRNA	0	1	0	0
322	TR-Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
323	TR-Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
324	TR-Correlate_molecularSubtype_vs_Mutation	1	0	0	0
325	TR-Correlate_mRNAseq_vs_Mutation_APOBEC	1	0	0	0
326	TR-GenerateStickFigures2.0	1	0	0	0
327	TR-GenerateStickFigures2CV	1	0	0	0
328	TR-GenerateStickFiguresCV	1	0	0	0
329	TR-iClusterPlus	1	0	0	0
330	TR-LegoPlotter2.0	1	0	0	0
331	TR-LegoPlotter2CV	1	0	0	0
332	TR-LegoPlotterCV	1	0	0	0
333	TR-Methylation_Clustering_CNMF	0	1	0	0
334	TR-miR_Clustering_CNMF	1	0	0	0
335	TR-miR_Clustering_Consensus_Plus	1	0	0	0
336	TR-miR_FindDirectTargets	1	0	0	0
337	TR-miRseq_Clustering_CNMF	1	0	0	0
338	TR-miRseq_Clustering_Consensus_Plus	1	0	0	0
339	TR-miRseq_FindDirectTargets	1	0	0	0
340	TR-miRseq_Mature_Clustering_CNMF	1	0	0	0
341	TR-miRseq_Mature_Clustering_Consensus_Plus	1	0	0	0
342	TR-mRNA_Clustering_CNMF	1	0	0	0
343	TR-mRNA_Clustering_Consensus_Plus	1	0	0	0
344	TR-mRNAseq_Clustering_CNMF	0	1	0	0
345	TR-mRNAseq_Clustering_Consensus_Plus	0	0	1	0
346	TR-Mutation_APOBEC	1	0	0	0
347	TR-Mutation_Assessor	1	0	0	0
348	TR-Mutation_CHASM	1	0	0	0
349	TR-Mutation_CoOccurrence	1	0	0	0
350	TR-Mutation_CoOccurrence_Custom	1	0	0	0
351	TR-MutSigNozzleReport2.0	1	0	0	0
352	TR-MutSigNozzleReport2CV	1	0	0	0
353	TR-MutSigNozzleReportCV	1	0	0	0
354	TR-MutSigPreprocess2.0	1	0	0	0
355	TR-MutSigRun2.0	1	0	0	0
356	TR-MutSigRun2CV	1	0	0	0
357	TR-MutSigRunCV	1	0	0	0
358	TR-Paradigm_mRNA	1	0	0	0
359	TR-Paradigm_mRNA_And_CopyNumber	1	0	0	0
360	TR-Paradigm_Prepare_mRNA	1	0	0	0
361	TR-Paradigm_Prepare_mRNA_And_Copy_Number	1	0	0	0
362	TR-Paradigm_Prepare_RNASeq	1	0	0	0
363	TR-Paradigm_Prepare_RNASeq_And_Copy_Number	1	0	0	0
364	TR-Paradigm_Preprocess_mRNA	1	0	0	0
365	TR-ParadigmPreprocess_mRNA	1	0	0	0
366	TR-Paradigm_Preprocess_mRNA_And_Copy_Number	1	0	0	0
367	TR-ParadigmPreprocess_RNASeq	0	1	0	0
368	TR-Paradigm_Preprocess_RNASeq	1	0	0	0
369	TR-Paradigm_Preprocess_RNASeq_And_Copy_Number	1	0	0	0
370	TR-Paradigm_Report_Preprocess_mRNA	1	0	0	0
371	TR-Paradigm_Report_Preprocess_mRNA_And_CopyNumber	1	0	0	0
372	TR-Paradigm_Report_Preprocess_RNASeq	1	0	0	0
373	TR-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number	1	0	0	0
374	TR-Paradigm_RNASeq	1	0	0	0
375	TR-Paradigm_RNASeq_And_Copy_Number	1	0	0	0
376	TR-Pathway_FindEnrichedGenes	1	0	0	0
377	TR-Pathway_GSEA_mRNAseq	1	0	0	0
378	TR-Pathway_Hotnet	1	0	0	0
379	TR-Pathway_Overlaps_MSigDB_MutSig2CV	1	0	0	0
380	TR-Pathway_Paradigm_mRNA	1	0	0	0
381	TR-Pathway_Paradigm_mRNA_And_Copy_Number	1	0	0	0
382	TR-Pathway_Paradigm_RNASeq	1	0	0	0
383	TR-Pathway_Paradigm_RNASeq_And_Copy_Number	1	0	0	0
384	TR-ProcessCoverageForMutSig2.0	1	0	0	0
385	TR-RPPA_Clustering_CNMF	1	0	0	0
386	TR-RPPA_Clustering_Consensus_Plus	1	0	0	0
387	TP-Aggregate_AnalysisFeatures	0	1	0	0
388	TP-Aggregate_Gene_Status	1	0	0	0
389	TP-Aggregate_Molecular_Subtype_Clusters	0	1	0	0
390	TP-Append_CustomClinical	0	1	0	0
391	TP-CoMut2.0	1	0	0	0
392	TP-CoMut2CV	1	0	0	0
393	TP-CoMutCV	1	0	0	0
394	TP-CopyNumber_Clustering_CNMF	1	0	0	0
395	TP-CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
396	TP-CopyNumber_Gistic2	0	1	0	0
397	TP-CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
398	TP-CopyNumberLowPass_Gistic2	0	1	0	0
399	TP-Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
400	TP-Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
401	TP-Correlate_Clinical_vs_Methylation	1	0	0	0
402	TP-Correlate_Clinical_vs_miR	1	0	0	0
403	TP-Correlate_Clinical_vs_miRseq	1	0	0	0
404	TP-Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
405	TP-Correlate_Clinical_vs_mRNA	1	0	0	0
406	TP-Correlate_Clinical_vs_mRNAseq	1	0	0	0
407	TP-Correlate_Clinical_vs_Mutation	1	0	0	0
408	TP-Correlate_Clinical_vs_Mutation_APOBEC_Categorical	1	0	0	0
409	TP-Correlate_Clinical_vs_Mutation_APOBEC_Continuous	1	0	0	0
410	TP-Correlate_Clinical_vs_MutationRate	1	0	0	0
411	TP-Correlate_Clinical_vs_RPPA	1	0	0	0
412	TP-Correlate_CopyNumber_vs_miR	1	0	0	0
413	TP-Correlate_CopyNumber_vs_mRNA	1	0	0	0
414	TP-Correlate_CopyNumber_vs_mRNAseq	1	0	0	0
415	TP-Correlate_Methylation_vs_mRNA	0	1	0	0
416	TP-Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
417	TP-Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
418	TP-Correlate_molecularSubtype_vs_Mutation	1	0	0	0
419	TP-Correlate_mRNAseq_vs_Mutation_APOBEC	1	0	0	0
420	TP-GenerateStickFigures2.0	1	0	0	0
421	TP-GenerateStickFigures2CV	1	0	0	0
422	TP-GenerateStickFiguresCV	1	0	0	0
423	TP-iClusterPlus	1	0	0	0
424	TP-LegoPlotter2.0	1	0	0	0
425	TP-LegoPlotter2CV	1	0	0	0
426	TP-LegoPlotterCV	1	0	0	0
427	TP-Methylation_Clustering_CNMF	0	1	0	0
428	TP-miR_Clustering_CNMF	0	1	0	0
429	TP-miR_Clustering_Consensus_Plus	0	1	0	0
430	TP-miR_FindDirectTargets	0	1	0	0
431	TP-miRseq_Clustering_CNMF	0	1	0	0
432	TP-miRseq_Clustering_Consensus_Plus	0	1	0	0
433	TP-miRseq_FindDirectTargets	0	1	0	0
434	TP-miRseq_Mature_Clustering_CNMF	0	1	0	0
435	TP-miRseq_Mature_Clustering_Consensus_Plus	0	1	0	0
436	TP-mRNA_Clustering_CNMF	0	1	0	0
437	TP-mRNA_Clustering_Consensus_Plus	0	1	0	0
438	TP-mRNAseq_Clustering_CNMF	0	1	0	0
439	TP-mRNAseq_Clustering_Consensus_Plus	0	0	1	0
440	TP-Mutation_APOBEC	1	0	0	0
441	TP-Mutation_Assessor	1	0	0	0
442	TP-Mutation_CHASM	1	0	0	0
443	TP-Mutation_CoOccurrence	1	0	0	0
444	TP-Mutation_CoOccurrence_Custom	1	0	0	0
445	TP-MutSigNozzleReport2.0	1	0	0	0
446	TP-MutSigNozzleReport2CV	1	0	0	0
447	TP-MutSigNozzleReportCV	1	0	0	0
448	TP-MutSigPreprocess2.0	0	1	0	0
449	TP-MutSigRun2.0	1	0	0	0
450	TP-MutSigRun2CV	0	1	0	0
451	TP-MutSigRunCV	0	1	0	0
452	TP-Paradigm_mRNA	1	0	0	0
453	TP-Paradigm_mRNA_And_CopyNumber	1	0	0	0
454	TP-Paradigm_Prepare_mRNA	1	0	0	0
455	TP-Paradigm_Prepare_mRNA_And_Copy_Number	1	0	0	0
456	TP-Paradigm_Prepare_RNASeq	1	0	0	0
457	TP-Paradigm_Prepare_RNASeq_And_Copy_Number	1	0	0	0
458	TP-ParadigmPreprocess_mRNA	0	1	0	0
459	TP-Paradigm_Preprocess_mRNA	1	0	0	0
460	TP-Paradigm_Preprocess_mRNA_And_Copy_Number	1	0	0	0
461	TP-ParadigmPreprocess_RNASeq	0	1	0	0
462	TP-Paradigm_Preprocess_RNASeq	1	0	0	0
463	TP-Paradigm_Preprocess_RNASeq_And_Copy_Number	1	0	0	0
464	TP-Paradigm_Report_Preprocess_mRNA	1	0	0	0
465	TP-Paradigm_Report_Preprocess_mRNA_And_CopyNumber	1	0	0	0
466	TP-Paradigm_Report_Preprocess_RNASeq	1	0	0	0
467	TP-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number	1	0	0	0
468	TP-Paradigm_RNASeq	1	0	0	0
469	TP-Paradigm_RNASeq_And_Copy_Number	1	0	0	0
470	TP-Pathway_FindEnrichedGenes	1	0	0	0
471	TP-Pathway_GSEA_mRNAseq	1	0	0	0
472	TP-Pathway_Hotnet	1	0	0	0
473	TP-Pathway_Overlaps_MSigDB_MutSig2CV	1	0	0	0
474	TP-Pathway_Paradigm_mRNA	1	0	0	0
475	TP-Pathway_Paradigm_mRNA_And_Copy_Number	1	0	0	0
476	TP-Pathway_Paradigm_RNASeq	1	0	0	0
477	TP-Pathway_Paradigm_RNASeq_And_Copy_Number	1	0	0	0
478	TP-ProcessCoverageForMutSig2.0	1	0	0	0
479	TP-RPPA_Clustering_CNMF	0	1	0	0
480	TP-RPPA_Clustering_Consensus_Plus	0	1	0	0
481	NT-Aggregate_AnalysisFeatures	0	1	0	0
482	NT-Aggregate_Gene_Status	1	0	0	0
483	NT-Aggregate_Molecular_Subtype_Clusters	1	0	0	0
484	NT-Append_CustomClinical	0	1	0	0
485	NT-CoMut2.0	1	0	0	0
486	NT-CoMut2CV	1	0	0	0
487	NT-CoMutCV	1	0	0	0
488	NT-CopyNumber_Clustering_CNMF	1	0	0	0
489	NT-CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
490	NT-CopyNumber_Gistic2	0	1	0	0
491	NT-CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
492	NT-CopyNumberLowPass_Gistic2	1	0	0	0
493	NT-Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
494	NT-Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
495	NT-Correlate_Clinical_vs_Methylation	1	0	0	0
496	NT-Correlate_Clinical_vs_miR	1	0	0	0
497	NT-Correlate_Clinical_vs_miRseq	1	0	0	0
498	NT-Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
499	NT-Correlate_Clinical_vs_mRNA	1	0	0	0
500	NT-Correlate_Clinical_vs_mRNAseq	1	0	0	0
501	NT-Correlate_Clinical_vs_Mutation	1	0	0	0
502	NT-Correlate_Clinical_vs_Mutation_APOBEC_Categorical	1	0	0	0
503	NT-Correlate_Clinical_vs_Mutation_APOBEC_Continuous	1	0	0	0
504	NT-Correlate_Clinical_vs_MutationRate	1	0	0	0
505	NT-Correlate_Clinical_vs_RPPA	1	0	0	0
506	NT-Correlate_CopyNumber_vs_miR	1	0	0	0
507	NT-Correlate_CopyNumber_vs_mRNA	1	0	0	0
508	NT-Correlate_CopyNumber_vs_mRNAseq	1	0	0	0
509	NT-Correlate_Methylation_vs_mRNA	1	0	0	0
510	NT-Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
511	NT-Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
512	NT-Correlate_molecularSubtype_vs_Mutation	1	0	0	0
513	NT-Correlate_mRNAseq_vs_Mutation_APOBEC	1	0	0	0
514	NT-GenerateStickFigures2.0	1	0	0	0
515	NT-GenerateStickFigures2CV	1	0	0	0
516	NT-GenerateStickFiguresCV	1	0	0	0
517	NT-iClusterPlus	1	0	0	0
518	NT-LegoPlotter2.0	1	0	0	0
519	NT-LegoPlotter2CV	1	0	0	0
520	NT-LegoPlotterCV	1	0	0	0
521	NT-Methylation_Clustering_CNMF	0	1	0	0
522	NT-miR_Clustering_CNMF	0	1	0	0
523	NT-miR_Clustering_Consensus_Plus	0	1	0	0
524	NT-miR_FindDirectTargets	0	1	0	0
525	NT-miRseq_Clustering_CNMF	1	0	0	0
526	NT-miRseq_Clustering_Consensus_Plus	1	0	0	0
527	NT-miRseq_FindDirectTargets	1	0	0	0
528	NT-miRseq_Mature_Clustering_CNMF	1	0	0	0
529	NT-miRseq_Mature_Clustering_Consensus_Plus	1	0	0	0
530	NT-mRNA_Clustering_CNMF	1	0	0	0
531	NT-mRNA_Clustering_Consensus_Plus	1	0	0	0
532	NT-mRNAseq_Clustering_CNMF	1	0	0	0
533	NT-mRNAseq_Clustering_Consensus_Plus	1	0	0	0
534	NT-Mutation_APOBEC	1	0	0	0
535	NT-Mutation_Assessor	1	0	0	0
536	NT-Mutation_CHASM	1	0	0	0
537	NT-Mutation_CoOccurrence	1	0	0	0
538	NT-Mutation_CoOccurrence_Custom	1	0	0	0
539	NT-MutSigNozzleReport2.0	1	0	0	0
540	NT-MutSigNozzleReport2CV	1	0	0	0
541	NT-MutSigNozzleReportCV	1	0	0	0
542	NT-MutSigPreprocess2.0	1	0	0	0
543	NT-MutSigRun2.0	1	0	0	0
544	NT-MutSigRun2CV	1	0	0	0
545	NT-MutSigRunCV	1	0	0	0
546	NT-Paradigm_mRNA	1	0	0	0
547	NT-Paradigm_mRNA_And_CopyNumber	1	0	0	0
548	NT-Paradigm_Prepare_mRNA	1	0	0	0
549	NT-Paradigm_Prepare_mRNA_And_Copy_Number	1	0	0	0
550	NT-Paradigm_Prepare_RNASeq	1	0	0	0
551	NT-Paradigm_Prepare_RNASeq_And_Copy_Number	1	0	0	0
552	NT-ParadigmPreprocess_mRNA	0	1	0	0
553	NT-Paradigm_Preprocess_mRNA	1	0	0	0
554	NT-Paradigm_Preprocess_mRNA_And_Copy_Number	1	0	0	0
555	NT-ParadigmPreprocess_RNASeq	0	1	0	0
556	NT-Paradigm_Preprocess_RNASeq	1	0	0	0
557	NT-Paradigm_Preprocess_RNASeq_And_Copy_Number	1	0	0	0
558	NT-Paradigm_Report_Preprocess_mRNA	1	0	0	0
559	NT-Paradigm_Report_Preprocess_mRNA_And_CopyNumber	1	0	0	0
560	NT-Paradigm_Report_Preprocess_RNASeq	1	0	0	0
561	NT-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number	1	0	0	0
562	NT-Paradigm_RNASeq	1	0	0	0
563	NT-Paradigm_RNASeq_And_Copy_Number	1	0	0	0
564	NT-Pathway_FindEnrichedGenes	1	0	0	0
565	NT-Pathway_GSEA_mRNAseq	1	0	0	0
566	NT-Pathway_Hotnet	1	0	0	0
567	NT-Pathway_Overlaps_MSigDB_MutSig2CV	1	0	0	0
568	NT-Pathway_Paradigm_mRNA	1	0	0	0
569	NT-Pathway_Paradigm_mRNA_And_Copy_Number	1	0	0	0
570	NT-Pathway_Paradigm_RNASeq	1	0	0	0
571	NT-Pathway_Paradigm_RNASeq_And_Copy_Number	1	0	0	0
572	NT-ProcessCoverageForMutSig2.0	1	0	0	0
573	NT-RPPA_Clustering_CNMF	1	0	0	0
574	NT-RPPA_Clustering_Consensus_Plus	1	0	0	0
575	NB-Aggregate_AnalysisFeatures	0	1	0	0
576	NB-Aggregate_Gene_Status	1	0	0	0
577	NB-Aggregate_Molecular_Subtype_Clusters	1	0	0	0
578	NB-Append_CustomClinical	0	1	0	0
579	NB-CoMut2.0	1	0	0	0
580	NB-CoMut2CV	1	0	0	0
581	NB-CoMutCV	1	0	0	0
582	NB-CopyNumber_Clustering_CNMF	1	0	0	0
583	NB-CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
584	NB-CopyNumber_Gistic2	0	1	0	0
585	NB-CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
586	NB-CopyNumberLowPass_Gistic2	0	1	0	0
587	NB-Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
588	NB-Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
589	NB-Correlate_Clinical_vs_Methylation	1	0	0	0
590	NB-Correlate_Clinical_vs_miR	1	0	0	0
591	NB-Correlate_Clinical_vs_miRseq	1	0	0	0
592	NB-Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
593	NB-Correlate_Clinical_vs_mRNA	1	0	0	0
594	NB-Correlate_Clinical_vs_mRNAseq	1	0	0	0
595	NB-Correlate_Clinical_vs_Mutation	1	0	0	0
596	NB-Correlate_Clinical_vs_Mutation_APOBEC_Categorical	1	0	0	0
597	NB-Correlate_Clinical_vs_Mutation_APOBEC_Continuous	1	0	0	0
598	NB-Correlate_Clinical_vs_MutationRate	1	0	0	0
599	NB-Correlate_Clinical_vs_RPPA	1	0	0	0
600	NB-Correlate_CopyNumber_vs_miR	1	0	0	0
601	NB-Correlate_CopyNumber_vs_mRNA	1	0	0	0
602	NB-Correlate_CopyNumber_vs_mRNAseq	1	0	0	0
603	NB-Correlate_Methylation_vs_mRNA	1	0	0	0
604	NB-Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
605	NB-Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
606	NB-Correlate_molecularSubtype_vs_Mutation	1	0	0	0
607	NB-Correlate_mRNAseq_vs_Mutation_APOBEC	1	0	0	0
608	NB-GenerateStickFigures2.0	1	0	0	0
609	NB-GenerateStickFigures2CV	1	0	0	0
610	NB-GenerateStickFiguresCV	1	0	0	0
611	NB-iClusterPlus	1	0	0	0
612	NB-LegoPlotter2.0	1	0	0	0
613	NB-LegoPlotter2CV	1	0	0	0
614	NB-LegoPlotterCV	1	0	0	0
615	NB-Methylation_Clustering_CNMF	1	0	0	0
616	NB-miR_Clustering_CNMF	1	0	0	0
617	NB-miR_Clustering_Consensus_Plus	1	0	0	0
618	NB-miR_FindDirectTargets	1	0	0	0
619	NB-miRseq_Clustering_CNMF	1	0	0	0
620	NB-miRseq_Clustering_Consensus_Plus	1	0	0	0
621	NB-miRseq_FindDirectTargets	1	0	0	0
622	NB-miRseq_Mature_Clustering_CNMF	1	0	0	0
623	NB-miRseq_Mature_Clustering_Consensus_Plus	1	0	0	0
624	NB-mRNA_Clustering_CNMF	1	0	0	0
625	NB-mRNA_Clustering_Consensus_Plus	1	0	0	0
626	NB-mRNAseq_Clustering_CNMF	1	0	0	0
627	NB-mRNAseq_Clustering_Consensus_Plus	1	0	0	0
628	NB-Mutation_APOBEC	1	0	0	0
629	NB-Mutation_Assessor	1	0	0	0
630	NB-Mutation_CHASM	1	0	0	0
631	NB-Mutation_CoOccurrence	1	0	0	0
632	NB-Mutation_CoOccurrence_Custom	1	0	0	0
633	NB-MutSigNozzleReport2.0	1	0	0	0
634	NB-MutSigNozzleReport2CV	1	0	0	0
635	NB-MutSigNozzleReportCV	1	0	0	0
636	NB-MutSigPreprocess2.0	1	0	0	0
637	NB-MutSigRun2.0	1	0	0	0
638	NB-MutSigRun2CV	1	0	0	0
639	NB-MutSigRunCV	1	0	0	0
640	NB-Paradigm_mRNA	1	0	0	0
641	NB-Paradigm_mRNA_And_CopyNumber	1	0	0	0
642	NB-Paradigm_Prepare_mRNA	1	0	0	0
643	NB-Paradigm_Prepare_mRNA_And_Copy_Number	1	0	0	0
644	NB-Paradigm_Prepare_RNASeq	1	0	0	0
645	NB-Paradigm_Prepare_RNASeq_And_Copy_Number	1	0	0	0
646	NB-Paradigm_Preprocess_mRNA	1	0	0	0
647	NB-ParadigmPreprocess_mRNA	1	0	0	0
648	NB-Paradigm_Preprocess_mRNA_And_Copy_Number	1	0	0	0
649	NB-Paradigm_Preprocess_RNASeq	1	0	0	0
650	NB-ParadigmPreprocess_RNASeq	1	0	0	0
651	NB-Paradigm_Preprocess_RNASeq_And_Copy_Number	1	0	0	0
652	NB-Paradigm_Report_Preprocess_mRNA	1	0	0	0
653	NB-Paradigm_Report_Preprocess_mRNA_And_CopyNumber	1	0	0	0
654	NB-Paradigm_Report_Preprocess_RNASeq	1	0	0	0
655	NB-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number	1	0	0	0
656	NB-Paradigm_RNASeq	1	0	0	0
657	NB-Paradigm_RNASeq_And_Copy_Number	1	0	0	0
658	NB-Pathway_FindEnrichedGenes	1	0	0	0
659	NB-Pathway_GSEA_mRNAseq	1	0	0	0
660	NB-Pathway_Hotnet	1	0	0	0
661	NB-Pathway_Overlaps_MSigDB_MutSig2CV	1	0	0	0
662	NB-Pathway_Paradigm_mRNA	1	0	0	0
663	NB-Pathway_Paradigm_mRNA_And_Copy_Number	1	0	0	0
664	NB-Pathway_Paradigm_RNASeq	1	0	0	0
665	NB-Pathway_Paradigm_RNASeq_And_Copy_Number	1	0	0	0
666	NB-ProcessCoverageForMutSig2.0	1	0	0	0
667	NB-RPPA_Clustering_CNMF	1	0	0	0
668	NB-RPPA_Clustering_Consensus_Plus	1	0	0	0
669	NBC-Aggregate_AnalysisFeatures	0	1	0	0
670	NBC-Aggregate_Gene_Status	1	0	0	0
671	NBC-Aggregate_Molecular_Subtype_Clusters	1	0	0	0
672	NBC-Append_CustomClinical	0	1	0	0
673	NBC-CoMut2.0	1	0	0	0
674	NBC-CoMut2CV	1	0	0	0
675	NBC-CoMutCV	1	0	0	0
676	NBC-CopyNumber_Clustering_CNMF	1	0	0	0
677	NBC-CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
678	NBC-CopyNumber_Gistic2	0	1	0	0
679	NBC-CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
680	NBC-CopyNumberLowPass_Gistic2	1	0	0	0
681	NBC-Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
682	NBC-Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
683	NBC-Correlate_Clinical_vs_Methylation	1	0	0	0
684	NBC-Correlate_Clinical_vs_miR	1	0	0	0
685	NBC-Correlate_Clinical_vs_miRseq	1	0	0	0
686	NBC-Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
687	NBC-Correlate_Clinical_vs_mRNA	1	0	0	0
688	NBC-Correlate_Clinical_vs_mRNAseq	1	0	0	0
689	NBC-Correlate_Clinical_vs_Mutation	1	0	0	0
690	NBC-Correlate_Clinical_vs_Mutation_APOBEC_Categorical	1	0	0	0
691	NBC-Correlate_Clinical_vs_Mutation_APOBEC_Continuous	1	0	0	0
692	NBC-Correlate_Clinical_vs_MutationRate	1	0	0	0
693	NBC-Correlate_Clinical_vs_RPPA	1	0	0	0
694	NBC-Correlate_CopyNumber_vs_miR	1	0	0	0
695	NBC-Correlate_CopyNumber_vs_mRNA	1	0	0	0
696	NBC-Correlate_CopyNumber_vs_mRNAseq	1	0	0	0
697	NBC-Correlate_Methylation_vs_mRNA	1	0	0	0
698	NBC-Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
699	NBC-Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
700	NBC-Correlate_molecularSubtype_vs_Mutation	1	0	0	0
701	NBC-Correlate_mRNAseq_vs_Mutation_APOBEC	1	0	0	0
702	NBC-GenerateStickFigures2.0	1	0	0	0
703	NBC-GenerateStickFigures2CV	1	0	0	0
704	NBC-GenerateStickFiguresCV	1	0	0	0
705	NBC-iClusterPlus	1	0	0	0
706	NBC-LegoPlotter2.0	1	0	0	0
707	NBC-LegoPlotter2CV	1	0	0	0
708	NBC-LegoPlotterCV	1	0	0	0
709	NBC-Methylation_Clustering_CNMF	1	0	0	0
710	NBC-miR_Clustering_CNMF	1	0	0	0
711	NBC-miR_Clustering_Consensus_Plus	1	0	0	0
712	NBC-miR_FindDirectTargets	1	0	0	0
713	NBC-miRseq_Clustering_CNMF	1	0	0	0
714	NBC-miRseq_Clustering_Consensus_Plus	1	0	0	0
715	NBC-miRseq_FindDirectTargets	1	0	0	0
716	NBC-miRseq_Mature_Clustering_CNMF	1	0	0	0
717	NBC-miRseq_Mature_Clustering_Consensus_Plus	1	0	0	0
718	NBC-mRNA_Clustering_CNMF	1	0	0	0
719	NBC-mRNA_Clustering_Consensus_Plus	1	0	0	0
720	NBC-mRNAseq_Clustering_CNMF	1	0	0	0
721	NBC-mRNAseq_Clustering_Consensus_Plus	1	0	0	0
722	NBC-Mutation_APOBEC	1	0	0	0
723	NBC-Mutation_Assessor	1	0	0	0
724	NBC-Mutation_CHASM	1	0	0	0
725	NBC-Mutation_CoOccurrence	1	0	0	0
726	NBC-Mutation_CoOccurrence_Custom	1	0	0	0
727	NBC-MutSigNozzleReport2.0	1	0	0	0
728	NBC-MutSigNozzleReport2CV	1	0	0	0
729	NBC-MutSigNozzleReportCV	1	0	0	0
730	NBC-MutSigPreprocess2.0	1	0	0	0
731	NBC-MutSigRun2.0	1	0	0	0
732	NBC-MutSigRun2CV	1	0	0	0
733	NBC-MutSigRunCV	1	0	0	0
734	NBC-Paradigm_mRNA	1	0	0	0
735	NBC-Paradigm_mRNA_And_CopyNumber	1	0	0	0
736	NBC-Paradigm_Prepare_mRNA	1	0	0	0
737	NBC-Paradigm_Prepare_mRNA_And_Copy_Number	1	0	0	0
738	NBC-Paradigm_Prepare_RNASeq	1	0	0	0
739	NBC-Paradigm_Prepare_RNASeq_And_Copy_Number	1	0	0	0
740	NBC-Paradigm_Preprocess_mRNA	1	0	0	0
741	NBC-ParadigmPreprocess_mRNA	1	0	0	0
742	NBC-Paradigm_Preprocess_mRNA_And_Copy_Number	1	0	0	0
743	NBC-Paradigm_Preprocess_RNASeq	1	0	0	0
744	NBC-ParadigmPreprocess_RNASeq	1	0	0	0
745	NBC-Paradigm_Preprocess_RNASeq_And_Copy_Number	1	0	0	0
746	NBC-Paradigm_Report_Preprocess_mRNA	1	0	0	0
747	NBC-Paradigm_Report_Preprocess_mRNA_And_CopyNumber	1	0	0	0
748	NBC-Paradigm_Report_Preprocess_RNASeq	1	0	0	0
749	NBC-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number	1	0	0	0
750	NBC-Paradigm_RNASeq	1	0	0	0
751	NBC-Paradigm_RNASeq_And_Copy_Number	1	0	0	0
752	NBC-Pathway_FindEnrichedGenes	1	0	0	0
753	NBC-Pathway_GSEA_mRNAseq	1	0	0	0
754	NBC-Pathway_Hotnet	1	0	0	0
755	NBC-Pathway_Overlaps_MSigDB_MutSig2CV	1	0	0	0
756	NBC-Pathway_Paradigm_mRNA	1	0	0	0
757	NBC-Pathway_Paradigm_mRNA_And_Copy_Number	1	0	0	0
758	NBC-Pathway_Paradigm_RNASeq	1	0	0	0
759	NBC-Pathway_Paradigm_RNASeq_And_Copy_Number	1	0	0	0
760	NBC-ProcessCoverageForMutSig2.0	1	0	0	0
761	NBC-RPPA_Clustering_CNMF	1	0	0	0
762	NBC-RPPA_Clustering_Consensus_Plus	1	0	0	0
	Total	599	82	68	13

This table generated on Thu Jan 26 11:03:50 2017

Broad GDAC Analyses Status dev Run for Tumor Type: GBMLGG

Broad GDAC Analyses Status
dev Run for Tumor Type: GBMLGG