Broad GDAC Analyses Status
dev Run for Tumor Type: TCGA-DLBC
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Pipeline
NotRunnable
Runnable
InProcess
Successful
Unsuccessful
1
Aggregate_AnalysisFeatures
0
0
0
1
0
2
Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
3
CopyNumber_Clustering_CNMF
0
0
0
1
0
4
CopyNumber_Clustering_CNMF_thresholded
0
0
0
1
0
5
CopyNumber_Gistic2
0
0
0
1
0
6
CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
7
Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
8
Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
9
Correlate_Clinical_vs_Methylation
1
0
0
0
0
10
Correlate_Clinical_vs_miR
0
1
0
0
0
11
Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
12
Correlate_Clinical_vs_mRNA
0
0
0
1
0
13
Correlate_Clinical_vs_Mutation
1
0
0
0
0
14
Correlate_CopyNumber_vs_miR
0
0
0
1
0
15
Correlate_CopyNumber_vs_mRNA
0
0
0
1
0
16
Correlate_Methylation_vs_mRNA
1
0
0
0
0
17
Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
18
Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
19
Methylation_Clustering_CNMF
1
0
0
0
0
20
Methylation_Preprocess
1
0
0
0
0
21
miR_FindDirectTargets
0
0
0
1
0
22
miR_Mature_Clustering_CNMF
0
0
0
1
0
23
miR_Mature_Clustering_Consensus_Plus
0
0
0
1
0
24
miR_Mature_Preprocess
0
0
0
1
0
25
mRNA_lincRNA_Clustering_Consensus_Plus
0
0
0
1
0
26
mRNA_lincRNA_CNMF
0
0
0
1
0
27
mRNA_Preprocess
0
0
0
1
0
28
mRNA_protein_coding_Clustering_CNMF
0
0
0
1
0
29
mRNA_protein_coding_Clustering_Consensus_Plus
0
0
0
1
0
30
Mutation_APOBEC
0
1
0
0
0
31
Mutation_CoOccurrence
0
0
0
1
0
32
Mutation_Signature
0
1
0
0
0
33
Pathway_GSEA_mRNA
0
0
0
1
0
34
TP-Aggregate_AnalysisFeatures
0
0
0
1
0
35
TP-Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
36
TP-CopyNumber_Clustering_CNMF
0
0
0
1
0
37
TP-CopyNumber_Clustering_CNMF_thresholded
0
0
0
1
0
38
TP-CopyNumber_Gistic2
0
0
0
1
0
39
TP-CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
40
TP-Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
41
TP-Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
42
TP-Correlate_Clinical_vs_Methylation
1
0
0
0
0
43
TP-Correlate_Clinical_vs_miR
0
1
0
0
0
44
TP-Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
45
TP-Correlate_Clinical_vs_mRNA
0
0
0
1
0
46
TP-Correlate_Clinical_vs_Mutation
1
0
0
0
0
47
TP-Correlate_CopyNumber_vs_miR
0
0
0
1
0
48
TP-Correlate_CopyNumber_vs_mRNA
0
0
0
1
0
49
TP-Correlate_Methylation_vs_mRNA
1
0
0
0
0
50
TP-Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
51
TP-Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
52
TP-Methylation_Clustering_CNMF
1
0
0
0
0
53
TP-Methylation_Preprocess
1
0
0
0
0
54
TP-miR_FindDirectTargets
0
0
0
1
0
55
TP-miR_Mature_Clustering_CNMF
0
0
0
1
0
56
TP-miR_Mature_Clustering_Consensus_Plus
0
0
0
1
0
57
TP-miR_Mature_Preprocess
0
0
0
1
0
58
TP-mRNA_lincRNA_Clustering_Consensus_Plus
0
0
0
1
0
59
TP-mRNA_lincRNA_CNMF
0
0
0
1
0
60
TP-mRNA_Preprocess
0
0
0
1
0
61
TP-mRNA_protein_coding_Clustering_CNMF
0
0
0
1
0
62
TP-mRNA_protein_coding_Clustering_Consensus_Plus
0
0
0
1
0
63
TP-Mutation_APOBEC
0
1
0
0
0
64
TP-Mutation_CoOccurrence
0
0
0
1
0
65
TP-Mutation_Signature
0
1
0
0
0
66
TP-Pathway_GSEA_mRNA
0
0
0
1
0
67
NB-Aggregate_AnalysisFeatures
0
1
0
0
0
68
NB-Aggregate_Molecular_Subtype_Clusters
1
0
0
0
0
69
NB-CopyNumber_Clustering_CNMF
1
0
0
0
0
70
NB-CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
71
NB-CopyNumber_Gistic2
0
0
0
0
1
72
NB-CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
73
NB-Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
74
NB-Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
75
NB-Correlate_Clinical_vs_Methylation
1
0
0
0
0
76
NB-Correlate_Clinical_vs_miR
1
0
0
0
0
77
NB-Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
78
NB-Correlate_Clinical_vs_mRNA
1
0
0
0
0
79
NB-Correlate_Clinical_vs_Mutation
1
0
0
0
0
80
NB-Correlate_CopyNumber_vs_miR
1
0
0
0
0
81
NB-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
82
NB-Correlate_Methylation_vs_mRNA
1
0
0
0
0
83
NB-Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
84
NB-Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
85
NB-Methylation_Clustering_CNMF
1
0
0
0
0
86
NB-Methylation_Preprocess
1
0
0
0
0
87
NB-miR_FindDirectTargets
1
0
0
0
0
88
NB-miR_Mature_Clustering_CNMF
1
0
0
0
0
89
NB-miR_Mature_Clustering_Consensus_Plus
1
0
0
0
0
90
NB-miR_Mature_Preprocess
1
0
0
0
0
91
NB-mRNA_lincRNA_Clustering_Consensus_Plus
1
0
0
0
0
92
NB-mRNA_lincRNA_CNMF
1
0
0
0
0
93
NB-mRNA_Preprocess
1
0
0
0
0
94
NB-mRNA_protein_coding_Clustering_CNMF
1
0
0
0
0
95
NB-mRNA_protein_coding_Clustering_Consensus_Plus
1
0
0
0
0
96
NB-Mutation_APOBEC
1
0
0
0
0
97
NB-Mutation_CoOccurrence
1
0
0
0
0
98
NB-Mutation_Signature
1
0
0
0
0
99
NB-Pathway_GSEA_mRNA
1
0
0
0
0
100
NBM-Aggregate_AnalysisFeatures
0
1
0
0
0
101
NBM-Aggregate_Molecular_Subtype_Clusters
1
0
0
0
0
102
NBM-CopyNumber_Clustering_CNMF
1
0
0
0
0
103
NBM-CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
104
NBM-CopyNumber_Gistic2
0
0
0
0
1
105
NBM-CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
106
NBM-Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
107
NBM-Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
108
NBM-Correlate_Clinical_vs_Methylation
1
0
0
0
0
109
NBM-Correlate_Clinical_vs_miR
1
0
0
0
0
110
NBM-Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
111
NBM-Correlate_Clinical_vs_mRNA
1
0
0
0
0
112
NBM-Correlate_Clinical_vs_Mutation
1
0
0
0
0
113
NBM-Correlate_CopyNumber_vs_miR
1
0
0
0
0
114
NBM-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
115
NBM-Correlate_Methylation_vs_mRNA
1
0
0
0
0
116
NBM-Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
117
NBM-Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
118
NBM-Methylation_Clustering_CNMF
1
0
0
0
0
119
NBM-Methylation_Preprocess
1
0
0
0
0
120
NBM-miR_FindDirectTargets
1
0
0
0
0
121
NBM-miR_Mature_Clustering_CNMF
1
0
0
0
0
122
NBM-miR_Mature_Clustering_Consensus_Plus
1
0
0
0
0
123
NBM-miR_Mature_Preprocess
1
0
0
0
0
124
NBM-mRNA_lincRNA_Clustering_Consensus_Plus
1
0
0
0
0
125
NBM-mRNA_lincRNA_CNMF
1
0
0
0
0
126
NBM-mRNA_Preprocess
1
0
0
0
0
127
NBM-mRNA_protein_coding_Clustering_CNMF
1
0
0
0
0
128
NBM-mRNA_protein_coding_Clustering_Consensus_Plus
1
0
0
0
0
129
NBM-Mutation_APOBEC
1
0
0
0
0
130
NBM-Mutation_CoOccurrence
1
0
0
0
0
131
NBM-Mutation_Signature
1
0
0
0
0
132
NBM-Pathway_GSEA_mRNA
1
0
0
0
0
Total
72
8
0
50
2
This table generated on Thu Jan 26 11:04:17 2017