Broad GDAC dev Run Status : TCGA-LUSC

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	Pipeline	NotRunnable	Runnable	Successful	Unsuccessful
1	Aggregate_AnalysisFeatures	0	0	1	0
2	Aggregate_Molecular_Subtype_Clusters	0	0	1	0
3	CopyNumber_Clustering_CNMF	0	0	1	0
4	CopyNumber_Clustering_CNMF_thresholded	0	0	1	0
5	CopyNumber_Gistic2	0	0	1	0
6	CopyNumber_Gistic2_Postprocess_Focal	0	0	1	0
7	Correlate_Clinical_vs_CopyNumber_Arm	0	0	1	0
8	Correlate_Clinical_vs_CopyNumber_Focal	0	0	1	0
9	Correlate_Clinical_vs_Methylation	1	0	0	0
10	Correlate_Clinical_vs_miR	0	1	0	0
11	Correlate_Clinical_vs_Molecular_Subtypes	0	0	1	0
12	Correlate_Clinical_vs_mRNA	0	0	1	0
13	Correlate_Clinical_vs_Mutation	1	0	0	0
14	Correlate_CopyNumber_vs_miR	0	0	1	0
15	Correlate_CopyNumber_vs_mRNA	0	0	1	0
16	Correlate_Methylation_vs_mRNA	1	0	0	0
17	Correlate_molecularSubtype_vs_CopyNumber_Arm	0	0	1	0
18	Correlate_molecularSubtype_vs_CopyNumber_Focal	0	0	1	0
19	Methylation_Clustering_CNMF	1	0	0	0
20	Methylation_Preprocess	1	0	0	0
21	miR_FindDirectTargets	0	0	1	0
22	miR_Mature_Clustering_CNMF	0	0	1	0
23	miR_Mature_Clustering_Consensus_Plus	0	0	1	0
24	miR_Mature_Preprocess	0	0	1	0
25	mRNA_lincRNA_Clustering_Consensus_Plus	0	0	1	0
26	mRNA_lincRNA_CNMF	0	0	1	0
27	mRNA_Preprocess	0	0	1	0
28	mRNA_protein_coding_Clustering_CNMF	0	0	1	0
29	mRNA_protein_coding_Clustering_Consensus_Plus	0	0	1	0
30	Mutation_APOBEC	0	1	0	0
31	Mutation_CoOccurrence	0	0	1	0
32	Mutation_Signature	0	1	0	0
33	Pathway_GSEA_mRNA	0	0	1	0
34	TP-Aggregate_AnalysisFeatures	0	0	1	0
35	TP-Aggregate_Molecular_Subtype_Clusters	0	0	1	0
36	TP-CopyNumber_Clustering_CNMF	0	0	1	0
37	TP-CopyNumber_Clustering_CNMF_thresholded	0	0	1	0
38	TP-CopyNumber_Gistic2	0	0	1	0
39	TP-CopyNumber_Gistic2_Postprocess_Focal	0	0	1	0
40	TP-Correlate_Clinical_vs_CopyNumber_Arm	0	0	1	0
41	TP-Correlate_Clinical_vs_CopyNumber_Focal	0	0	1	0
42	TP-Correlate_Clinical_vs_Methylation	1	0	0	0
43	TP-Correlate_Clinical_vs_miR	0	1	0	0
44	TP-Correlate_Clinical_vs_Molecular_Subtypes	0	0	1	0
45	TP-Correlate_Clinical_vs_mRNA	0	0	1	0
46	TP-Correlate_Clinical_vs_Mutation	1	0	0	0
47	TP-Correlate_CopyNumber_vs_miR	0	0	1	0
48	TP-Correlate_CopyNumber_vs_mRNA	0	0	1	0
49	TP-Correlate_Methylation_vs_mRNA	1	0	0	0
50	TP-Correlate_molecularSubtype_vs_CopyNumber_Arm	0	0	1	0
51	TP-Correlate_molecularSubtype_vs_CopyNumber_Focal	0	0	1	0
52	TP-Methylation_Clustering_CNMF	1	0	0	0
53	TP-Methylation_Preprocess	1	0	0	0
54	TP-miR_FindDirectTargets	0	0	1	0
55	TP-miR_Mature_Clustering_CNMF	0	0	1	0
56	TP-miR_Mature_Clustering_Consensus_Plus	0	0	1	0
57	TP-miR_Mature_Preprocess	0	0	1	0
58	TP-mRNA_lincRNA_Clustering_Consensus_Plus	0	0	1	0
59	TP-mRNA_lincRNA_CNMF	0	0	1	0
60	TP-mRNA_Preprocess	0	0	1	0
61	TP-mRNA_protein_coding_Clustering_CNMF	0	0	1	0
62	TP-mRNA_protein_coding_Clustering_Consensus_Plus	0	0	1	0
63	TP-Mutation_APOBEC	0	1	0	0
64	TP-Mutation_CoOccurrence	0	0	1	0
65	TP-Mutation_Signature	0	1	0	0
66	TP-Pathway_GSEA_mRNA	0	0	0	1
67	NT-Aggregate_AnalysisFeatures	0	1	0	0
68	NT-Aggregate_Molecular_Subtype_Clusters	0	0	1	0
69	NT-CopyNumber_Clustering_CNMF	1	0	0	0
70	NT-CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
71	NT-CopyNumber_Gistic2	0	0	0	1
72	NT-CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
73	NT-Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
74	NT-Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
75	NT-Correlate_Clinical_vs_Methylation	1	0	0	0
76	NT-Correlate_Clinical_vs_miR	0	1	0	0
77	NT-Correlate_Clinical_vs_Molecular_Subtypes	0	0	1	0
78	NT-Correlate_Clinical_vs_mRNA	0	0	1	0
79	NT-Correlate_Clinical_vs_Mutation	1	0	0	0
80	NT-Correlate_CopyNumber_vs_miR	1	0	0	0
81	NT-Correlate_CopyNumber_vs_mRNA	1	0	0	0
82	NT-Correlate_Methylation_vs_mRNA	1	0	0	0
83	NT-Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
84	NT-Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
85	NT-Methylation_Clustering_CNMF	1	0	0	0
86	NT-Methylation_Preprocess	1	0	0	0
87	NT-miR_FindDirectTargets	0	0	1	0
88	NT-miR_Mature_Clustering_CNMF	0	0	1	0
89	NT-miR_Mature_Clustering_Consensus_Plus	0	0	1	0
90	NT-miR_Mature_Preprocess	0	0	1	0
91	NT-mRNA_lincRNA_Clustering_Consensus_Plus	0	0	1	0
92	NT-mRNA_lincRNA_CNMF	0	0	1	0
93	NT-mRNA_Preprocess	0	0	1	0
94	NT-mRNA_protein_coding_Clustering_CNMF	0	0	1	0
95	NT-mRNA_protein_coding_Clustering_Consensus_Plus	0	0	1	0
96	NT-Mutation_APOBEC	1	0	0	0
97	NT-Mutation_CoOccurrence	1	0	0	0
98	NT-Mutation_Signature	1	0	0	0
99	NT-Pathway_GSEA_mRNA	0	0	0	1
100	NB-Aggregate_AnalysisFeatures	0	1	0	0
101	NB-Aggregate_Molecular_Subtype_Clusters	1	0	0	0
102	NB-CopyNumber_Clustering_CNMF	1	0	0	0
103	NB-CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
104	NB-CopyNumber_Gistic2	0	0	0	1
105	NB-CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
106	NB-Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
107	NB-Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
108	NB-Correlate_Clinical_vs_Methylation	1	0	0	0
109	NB-Correlate_Clinical_vs_miR	1	0	0	0
110	NB-Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
111	NB-Correlate_Clinical_vs_mRNA	1	0	0	0
112	NB-Correlate_Clinical_vs_Mutation	1	0	0	0
113	NB-Correlate_CopyNumber_vs_miR	1	0	0	0
114	NB-Correlate_CopyNumber_vs_mRNA	1	0	0	0
115	NB-Correlate_Methylation_vs_mRNA	1	0	0	0
116	NB-Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
117	NB-Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
118	NB-Methylation_Clustering_CNMF	1	0	0	0
119	NB-Methylation_Preprocess	1	0	0	0
120	NB-miR_FindDirectTargets	1	0	0	0
121	NB-miR_Mature_Clustering_CNMF	1	0	0	0
122	NB-miR_Mature_Clustering_Consensus_Plus	1	0	0	0
123	NB-miR_Mature_Preprocess	1	0	0	0
124	NB-mRNA_lincRNA_Clustering_Consensus_Plus	1	0	0	0
125	NB-mRNA_lincRNA_CNMF	1	0	0	0
126	NB-mRNA_Preprocess	1	0	0	0
127	NB-mRNA_protein_coding_Clustering_CNMF	1	0	0	0
128	NB-mRNA_protein_coding_Clustering_Consensus_Plus	1	0	0	0
129	NB-Mutation_APOBEC	1	0	0	0
130	NB-Mutation_CoOccurrence	1	0	0	0
131	NB-Mutation_Signature	1	0	0	0
132	NB-Pathway_GSEA_mRNA	1	0	0	0
133	FFPE-Aggregate_AnalysisFeatures	0	1	0	0
134	FFPE-Aggregate_Molecular_Subtype_Clusters	1	0	0	0
135	FFPE-CopyNumber_Clustering_CNMF	1	0	0	0
136	FFPE-CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
137	FFPE-CopyNumber_Gistic2	1	0	0	0
138	FFPE-CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
139	FFPE-Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
140	FFPE-Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
141	FFPE-Correlate_Clinical_vs_Methylation	1	0	0	0
142	FFPE-Correlate_Clinical_vs_miR	1	0	0	0
143	FFPE-Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
144	FFPE-Correlate_Clinical_vs_mRNA	1	0	0	0
145	FFPE-Correlate_Clinical_vs_Mutation	1	0	0	0
146	FFPE-Correlate_CopyNumber_vs_miR	1	0	0	0
147	FFPE-Correlate_CopyNumber_vs_mRNA	1	0	0	0
148	FFPE-Correlate_Methylation_vs_mRNA	1	0	0	0
149	FFPE-Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
150	FFPE-Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
151	FFPE-Methylation_Clustering_CNMF	1	0	0	0
152	FFPE-Methylation_Preprocess	1	0	0	0
153	FFPE-miR_FindDirectTargets	1	0	0	0
154	FFPE-miR_Mature_Clustering_CNMF	1	0	0	0
155	FFPE-miR_Mature_Clustering_Consensus_Plus	1	0	0	0
156	FFPE-miR_Mature_Preprocess	1	0	0	0
157	FFPE-mRNA_lincRNA_Clustering_Consensus_Plus	1	0	0	0
158	FFPE-mRNA_lincRNA_CNMF	1	0	0	0
159	FFPE-mRNA_Preprocess	1	0	0	0
160	FFPE-mRNA_protein_coding_Clustering_CNMF	1	0	0	0
161	FFPE-mRNA_protein_coding_Clustering_Consensus_Plus	1	0	0	0
162	FFPE-Mutation_APOBEC	0	1	0	0
163	FFPE-Mutation_CoOccurrence	1	0	0	0
164	FFPE-Mutation_Signature	0	1	0	0
165	FFPE-Pathway_GSEA_mRNA	1	0	0	0
	Total	88	12	61	4

This table generated on Thu Jan 26 11:04:19 2017

Broad GDAC Analyses Status dev Run for Tumor Type: TCGA-LUSC

Broad GDAC Analyses Status
dev Run for Tumor Type: TCGA-LUSC