Broad GDAC Analyses Status
dev Run for Tumor Type: UCEC
Cohort
BCR
Clinical
CN
LowP
Methylation
mRNA
mRNASeq
miR
miRSeq
RPPA
MAF
rawMAF
UCEC
560
548
540
106
547
54
545
0
538
440
248
0
Note that the links below require Broad internal Firehose login credentials.
Pipeline
NotRunnable
Runnable
InProcess
Successful
Unsuccessful
1
Aggregate_AnalysisFeatures
0
1
0
0
0
2
Aggregate_Gene_Status
1
0
0
0
0
3
Aggregate_Molecular_Subtype_Clusters
0
1
0
0
0
4
Append_CustomClinical
0
1
0
0
0
5
CoMut2.0
1
0
0
0
0
6
CoMut2CV
1
0
0
0
0
7
CoMutCV
1
0
0
0
0
8
CopyNumber_Clustering_CNMF
1
0
0
0
0
9
CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
10
CopyNumber_Gistic2
0
1
0
0
0
11
CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
12
CopyNumberLowPass_Gistic2
0
1
0
0
0
13
Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
14
Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
15
Correlate_Clinical_vs_Methylation
1
0
0
0
0
16
Correlate_Clinical_vs_miR
1
0
0
0
0
17
Correlate_Clinical_vs_miRseq
1
0
0
0
0
18
Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
19
Correlate_Clinical_vs_mRNA
1
0
0
0
0
20
Correlate_Clinical_vs_mRNAseq
1
0
0
0
0
21
Correlate_Clinical_vs_Mutation
1
0
0
0
0
22
Correlate_Clinical_vs_Mutation_APOBEC_Categorical
1
0
0
0
0
23
Correlate_Clinical_vs_Mutation_APOBEC_Continuous
1
0
0
0
0
24
Correlate_Clinical_vs_MutationRate
1
0
0
0
0
25
Correlate_Clinical_vs_RPPA
1
0
0
0
0
26
Correlate_CopyNumber_vs_miR
1
0
0
0
0
27
Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
28
Correlate_CopyNumber_vs_mRNAseq
1
0
0
0
0
29
Correlate_Methylation_vs_mRNA
0
1
0
0
0
30
Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
31
Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
32
Correlate_molecularSubtype_vs_Mutation
1
0
0
0
0
33
Correlate_mRNAseq_vs_Mutation_APOBEC
1
0
0
0
0
34
GenerateStickFigures2.0
1
0
0
0
0
35
GenerateStickFigures2CV
1
0
0
0
0
36
GenerateStickFiguresCV
1
0
0
0
0
37
iClusterPlus
1
0
0
0
0
38
LegoPlotter2.0
1
0
0
0
0
39
LegoPlotter2CV
1
0
0
0
0
40
LegoPlotterCV
1
0
0
0
0
41
Methylation_Clustering_CNMF
0
1
0
0
0
42
miR_Clustering_CNMF
1
0
0
0
0
43
miR_Clustering_Consensus_Plus
1
0
0
0
0
44
miR_FindDirectTargets
1
0
0
0
0
45
miRseq_Clustering_CNMF
0
1
0
0
0
46
miRseq_Clustering_Consensus_Plus
0
1
0
0
0
47
miRseq_FindDirectTargets
0
1
0
0
0
48
miRseq_Mature_Clustering_CNMF
0
1
0
0
0
49
miRseq_Mature_Clustering_Consensus_Plus
0
1
0
0
0
50
mRNA_Clustering_CNMF
0
1
0
0
0
51
mRNA_Clustering_Consensus_Plus
0
1
0
0
0
52
mRNAseq_Clustering_CNMF
0
1
0
0
0
53
mRNAseq_Clustering_Consensus_Plus
0
0
0
1
0
54
Mutation_APOBEC
1
0
0
0
0
55
Mutation_Assessor
1
0
0
0
0
56
Mutation_CHASM
1
0
0
0
0
57
Mutation_CoOccurrence
1
0
0
0
0
58
Mutation_CoOccurrence_Custom
1
0
0
0
0
59
MutSigNozzleReport2.0
1
0
0
0
0
60
MutSigNozzleReport2CV
1
0
0
0
0
61
MutSigNozzleReportCV
1
0
0
0
0
62
MutSigPreprocess2.0
1
0
0
0
0
63
MutSigRun2.0
1
0
0
0
0
64
MutSigRun2CV
1
0
0
0
0
65
MutSigRunCV
1
0
0
0
0
66
Paradigm_mRNA
1
0
0
0
0
67
Paradigm_mRNA_And_CopyNumber
1
0
0
0
0
68
Paradigm_Prepare_mRNA
1
0
0
0
0
69
Paradigm_Prepare_mRNA_And_Copy_Number
1
0
0
0
0
70
Paradigm_Prepare_RNASeq
1
0
0
0
0
71
Paradigm_Prepare_RNASeq_And_Copy_Number
1
0
0
0
0
72
ParadigmPreprocess_mRNA
0
1
0
0
0
73
Paradigm_Preprocess_mRNA
1
0
0
0
0
74
Paradigm_Preprocess_mRNA_And_Copy_Number
1
0
0
0
0
75
ParadigmPreprocess_RNASeq
0
1
0
0
0
76
Paradigm_Preprocess_RNASeq
1
0
0
0
0
77
Paradigm_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
78
Paradigm_Report_Preprocess_mRNA
1
0
0
0
0
79
Paradigm_Report_Preprocess_mRNA_And_CopyNumber
1
0
0
0
0
80
Paradigm_Report_Preprocess_RNASeq
1
0
0
0
0
81
Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
82
Paradigm_RNASeq
1
0
0
0
0
83
Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
84
Pathway_FindEnrichedGenes
1
0
0
0
0
85
Pathway_GSEA_mRNAseq
1
0
0
0
0
86
Pathway_Hotnet
1
0
0
0
0
87
Pathway_Overlaps_MSigDB_MutSig2CV
1
0
0
0
0
88
Pathway_Paradigm_mRNA
1
0
0
0
0
89
Pathway_Paradigm_mRNA_And_Copy_Number
1
0
0
0
0
90
Pathway_Paradigm_RNASeq
1
0
0
0
0
91
Pathway_Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
92
ProcessCoverageForMutSig2.0
1
0
0
0
0
93
RPPA_Clustering_CNMF
0
1
0
0
0
94
RPPA_Clustering_Consensus_Plus
0
1
0
0
0
95
TR-Aggregate_AnalysisFeatures
0
1
0
0
0
96
TR-Aggregate_Gene_Status
1
0
0
0
0
97
TR-Aggregate_Molecular_Subtype_Clusters
1
0
0
0
0
98
TR-Append_CustomClinical
1
0
0
0
0
99
TR-CoMut2.0
1
0
0
0
0
100
TR-CoMut2CV
1
0
0
0
0
101
TR-CoMutCV
1
0
0
0
0
102
TR-CopyNumber_Clustering_CNMF
1
0
0
0
0
103
TR-CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
104
TR-CopyNumber_Gistic2
0
1
0
0
0
105
TR-CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
106
TR-CopyNumberLowPass_Gistic2
1
0
0
0
0
107
TR-Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
108
TR-Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
109
TR-Correlate_Clinical_vs_Methylation
1
0
0
0
0
110
TR-Correlate_Clinical_vs_miR
1
0
0
0
0
111
TR-Correlate_Clinical_vs_miRseq
1
0
0
0
0
112
TR-Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
113
TR-Correlate_Clinical_vs_mRNA
1
0
0
0
0
114
TR-Correlate_Clinical_vs_mRNAseq
1
0
0
0
0
115
TR-Correlate_Clinical_vs_Mutation
1
0
0
0
0
116
TR-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
1
0
0
0
0
117
TR-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
1
0
0
0
0
118
TR-Correlate_Clinical_vs_MutationRate
1
0
0
0
0
119
TR-Correlate_Clinical_vs_RPPA
1
0
0
0
0
120
TR-Correlate_CopyNumber_vs_miR
1
0
0
0
0
121
TR-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
122
TR-Correlate_CopyNumber_vs_mRNAseq
1
0
0
0
0
123
TR-Correlate_Methylation_vs_mRNA
1
0
0
0
0
124
TR-Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
125
TR-Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
126
TR-Correlate_molecularSubtype_vs_Mutation
1
0
0
0
0
127
TR-Correlate_mRNAseq_vs_Mutation_APOBEC
1
0
0
0
0
128
TR-GenerateStickFigures2.0
1
0
0
0
0
129
TR-GenerateStickFigures2CV
1
0
0
0
0
130
TR-GenerateStickFiguresCV
1
0
0
0
0
131
TR-iClusterPlus
1
0
0
0
0
132
TR-LegoPlotter2.0
1
0
0
0
0
133
TR-LegoPlotter2CV
1
0
0
0
0
134
TR-LegoPlotterCV
1
0
0
0
0
135
TR-Methylation_Clustering_CNMF
0
1
0
0
0
136
TR-miR_Clustering_CNMF
1
0
0
0
0
137
TR-miR_Clustering_Consensus_Plus
1
0
0
0
0
138
TR-miR_FindDirectTargets
1
0
0
0
0
139
TR-miRseq_Clustering_CNMF
1
0
0
0
0
140
TR-miRseq_Clustering_Consensus_Plus
1
0
0
0
0
141
TR-miRseq_FindDirectTargets
1
0
0
0
0
142
TR-miRseq_Mature_Clustering_CNMF
1
0
0
0
0
143
TR-miRseq_Mature_Clustering_Consensus_Plus
1
0
0
0
0
144
TR-mRNA_Clustering_CNMF
1
0
0
0
0
145
TR-mRNA_Clustering_Consensus_Plus
1
0
0
0
0
146
TR-mRNAseq_Clustering_CNMF
1
0
0
0
0
147
TR-mRNAseq_Clustering_Consensus_Plus
1
0
0
0
0
148
TR-Mutation_APOBEC
1
0
0
0
0
149
TR-Mutation_Assessor
1
0
0
0
0
150
TR-Mutation_CHASM
1
0
0
0
0
151
TR-Mutation_CoOccurrence
1
0
0
0
0
152
TR-Mutation_CoOccurrence_Custom
1
0
0
0
0
153
TR-MutSigNozzleReport2.0
1
0
0
0
0
154
TR-MutSigNozzleReport2CV
1
0
0
0
0
155
TR-MutSigNozzleReportCV
1
0
0
0
0
156
TR-MutSigPreprocess2.0
1
0
0
0
0
157
TR-MutSigRun2.0
1
0
0
0
0
158
TR-MutSigRun2CV
1
0
0
0
0
159
TR-MutSigRunCV
1
0
0
0
0
160
TR-Paradigm_mRNA
1
0
0
0
0
161
TR-Paradigm_mRNA_And_CopyNumber
1
0
0
0
0
162
TR-Paradigm_Prepare_mRNA
1
0
0
0
0
163
TR-Paradigm_Prepare_mRNA_And_Copy_Number
1
0
0
0
0
164
TR-Paradigm_Prepare_RNASeq
1
0
0
0
0
165
TR-Paradigm_Prepare_RNASeq_And_Copy_Number
1
0
0
0
0
166
TR-Paradigm_Preprocess_mRNA
1
0
0
0
0
167
TR-ParadigmPreprocess_mRNA
1
0
0
0
0
168
TR-Paradigm_Preprocess_mRNA_And_Copy_Number
1
0
0
0
0
169
TR-ParadigmPreprocess_RNASeq
0
1
0
0
0
170
TR-Paradigm_Preprocess_RNASeq
1
0
0
0
0
171
TR-Paradigm_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
172
TR-Paradigm_Report_Preprocess_mRNA
1
0
0
0
0
173
TR-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
1
0
0
0
0
174
TR-Paradigm_Report_Preprocess_RNASeq
1
0
0
0
0
175
TR-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
176
TR-Paradigm_RNASeq
1
0
0
0
0
177
TR-Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
178
TR-Pathway_FindEnrichedGenes
1
0
0
0
0
179
TR-Pathway_GSEA_mRNAseq
1
0
0
0
0
180
TR-Pathway_Hotnet
1
0
0
0
0
181
TR-Pathway_Overlaps_MSigDB_MutSig2CV
1
0
0
0
0
182
TR-Pathway_Paradigm_mRNA
1
0
0
0
0
183
TR-Pathway_Paradigm_mRNA_And_Copy_Number
1
0
0
0
0
184
TR-Pathway_Paradigm_RNASeq
1
0
0
0
0
185
TR-Pathway_Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
186
TR-ProcessCoverageForMutSig2.0
1
0
0
0
0
187
TR-RPPA_Clustering_CNMF
1
0
0
0
0
188
TR-RPPA_Clustering_Consensus_Plus
1
0
0
0
0
189
TP-Aggregate_AnalysisFeatures
0
1
0
0
0
190
TP-Aggregate_Gene_Status
1
0
0
0
0
191
TP-Aggregate_Molecular_Subtype_Clusters
0
1
0
0
0
192
TP-Append_CustomClinical
0
1
0
0
0
193
TP-CoMut2.0
1
0
0
0
0
194
TP-CoMut2CV
1
0
0
0
0
195
TP-CoMutCV
1
0
0
0
0
196
TP-CopyNumber_Clustering_CNMF
1
0
0
0
0
197
TP-CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
198
TP-CopyNumber_Gistic2
0
1
0
0
0
199
TP-CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
200
TP-CopyNumberLowPass_Gistic2
0
1
0
0
0
201
TP-Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
202
TP-Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
203
TP-Correlate_Clinical_vs_Methylation
1
0
0
0
0
204
TP-Correlate_Clinical_vs_miR
1
0
0
0
0
205
TP-Correlate_Clinical_vs_miRseq
1
0
0
0
0
206
TP-Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
207
TP-Correlate_Clinical_vs_mRNA
1
0
0
0
0
208
TP-Correlate_Clinical_vs_mRNAseq
1
0
0
0
0
209
TP-Correlate_Clinical_vs_Mutation
1
0
0
0
0
210
TP-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
1
0
0
0
0
211
TP-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
1
0
0
0
0
212
TP-Correlate_Clinical_vs_MutationRate
1
0
0
0
0
213
TP-Correlate_Clinical_vs_RPPA
1
0
0
0
0
214
TP-Correlate_CopyNumber_vs_miR
1
0
0
0
0
215
TP-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
216
TP-Correlate_CopyNumber_vs_mRNAseq
1
0
0
0
0
217
TP-Correlate_Methylation_vs_mRNA
0
1
0
0
0
218
TP-Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
219
TP-Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
220
TP-Correlate_molecularSubtype_vs_Mutation
1
0
0
0
0
221
TP-Correlate_mRNAseq_vs_Mutation_APOBEC
1
0
0
0
0
222
TP-GenerateStickFigures2.0
1
0
0
0
0
223
TP-GenerateStickFigures2CV
1
0
0
0
0
224
TP-GenerateStickFiguresCV
1
0
0
0
0
225
TP-iClusterPlus
1
0
0
0
0
226
TP-LegoPlotter2.0
1
0
0
0
0
227
TP-LegoPlotter2CV
1
0
0
0
0
228
TP-LegoPlotterCV
1
0
0
0
0
229
TP-Methylation_Clustering_CNMF
0
1
0
0
0
230
TP-miR_Clustering_CNMF
1
0
0
0
0
231
TP-miR_Clustering_Consensus_Plus
1
0
0
0
0
232
TP-miR_FindDirectTargets
1
0
0
0
0
233
TP-miRseq_Clustering_CNMF
0
1
0
0
0
234
TP-miRseq_Clustering_Consensus_Plus
0
1
0
0
0
235
TP-miRseq_FindDirectTargets
0
1
0
0
0
236
TP-miRseq_Mature_Clustering_CNMF
0
1
0
0
0
237
TP-miRseq_Mature_Clustering_Consensus_Plus
0
1
0
0
0
238
TP-mRNA_Clustering_CNMF
0
1
0
0
0
239
TP-mRNA_Clustering_Consensus_Plus
0
1
0
0
0
240
TP-mRNAseq_Clustering_CNMF
0
1
0
0
0
241
TP-mRNAseq_Clustering_Consensus_Plus
0
0
0
1
0
242
TP-Mutation_APOBEC
1
0
0
0
0
243
TP-Mutation_Assessor
1
0
0
0
0
244
TP-Mutation_CHASM
1
0
0
0
0
245
TP-Mutation_CoOccurrence
1
0
0
0
0
246
TP-Mutation_CoOccurrence_Custom
1
0
0
0
0
247
TP-MutSigNozzleReport2.0
1
0
0
0
0
248
TP-MutSigNozzleReport2CV
1
0
0
0
0
249
TP-MutSigNozzleReportCV
1
0
0
0
0
250
TP-MutSigPreprocess2.0
0
1
0
0
0
251
TP-MutSigRun2.0
1
0
0
0
0
252
TP-MutSigRun2CV
0
1
0
0
0
253
TP-MutSigRunCV
0
1
0
0
0
254
TP-Paradigm_mRNA
1
0
0
0
0
255
TP-Paradigm_mRNA_And_CopyNumber
1
0
0
0
0
256
TP-Paradigm_Prepare_mRNA
1
0
0
0
0
257
TP-Paradigm_Prepare_mRNA_And_Copy_Number
1
0
0
0
0
258
TP-Paradigm_Prepare_RNASeq
1
0
0
0
0
259
TP-Paradigm_Prepare_RNASeq_And_Copy_Number
1
0
0
0
0
260
TP-ParadigmPreprocess_mRNA
0
1
0
0
0
261
TP-Paradigm_Preprocess_mRNA
1
0
0
0
0
262
TP-Paradigm_Preprocess_mRNA_And_Copy_Number
1
0
0
0
0
263
TP-ParadigmPreprocess_RNASeq
0
1
0
0
0
264
TP-Paradigm_Preprocess_RNASeq
1
0
0
0
0
265
TP-Paradigm_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
266
TP-Paradigm_Report_Preprocess_mRNA
1
0
0
0
0
267
TP-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
1
0
0
0
0
268
TP-Paradigm_Report_Preprocess_RNASeq
1
0
0
0
0
269
TP-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
270
TP-Paradigm_RNASeq
1
0
0
0
0
271
TP-Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
272
TP-Pathway_FindEnrichedGenes
1
0
0
0
0
273
TP-Pathway_GSEA_mRNAseq
1
0
0
0
0
274
TP-Pathway_Hotnet
1
0
0
0
0
275
TP-Pathway_Overlaps_MSigDB_MutSig2CV
1
0
0
0
0
276
TP-Pathway_Paradigm_mRNA
1
0
0
0
0
277
TP-Pathway_Paradigm_mRNA_And_Copy_Number
1
0
0
0
0
278
TP-Pathway_Paradigm_RNASeq
1
0
0
0
0
279
TP-Pathway_Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
280
TP-ProcessCoverageForMutSig2.0
1
0
0
0
0
281
TP-RPPA_Clustering_CNMF
0
1
0
0
0
282
TP-RPPA_Clustering_Consensus_Plus
0
1
0
0
0
283
NT-Aggregate_AnalysisFeatures
0
1
0
0
0
284
NT-Aggregate_Gene_Status
1
0
0
0
0
285
NT-Aggregate_Molecular_Subtype_Clusters
0
1
0
0
0
286
NT-Append_CustomClinical
0
1
0
0
0
287
NT-CoMut2.0
1
0
0
0
0
288
NT-CoMut2CV
1
0
0
0
0
289
NT-CoMutCV
1
0
0
0
0
290
NT-CopyNumber_Clustering_CNMF
1
0
0
0
0
291
NT-CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
292
NT-CopyNumber_Gistic2
0
1
0
0
0
293
NT-CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
294
NT-CopyNumberLowPass_Gistic2
0
1
0
0
0
295
NT-Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
296
NT-Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
297
NT-Correlate_Clinical_vs_Methylation
1
0
0
0
0
298
NT-Correlate_Clinical_vs_miR
1
0
0
0
0
299
NT-Correlate_Clinical_vs_miRseq
1
0
0
0
0
300
NT-Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
301
NT-Correlate_Clinical_vs_mRNA
1
0
0
0
0
302
NT-Correlate_Clinical_vs_mRNAseq
1
0
0
0
0
303
NT-Correlate_Clinical_vs_Mutation
1
0
0
0
0
304
NT-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
1
0
0
0
0
305
NT-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
1
0
0
0
0
306
NT-Correlate_Clinical_vs_MutationRate
1
0
0
0
0
307
NT-Correlate_Clinical_vs_RPPA
1
0
0
0
0
308
NT-Correlate_CopyNumber_vs_miR
1
0
0
0
0
309
NT-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
310
NT-Correlate_CopyNumber_vs_mRNAseq
1
0
0
0
0
311
NT-Correlate_Methylation_vs_mRNA
0
1
0
0
0
312
NT-Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
313
NT-Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
314
NT-Correlate_molecularSubtype_vs_Mutation
1
0
0
0
0
315
NT-Correlate_mRNAseq_vs_Mutation_APOBEC
1
0
0
0
0
316
NT-GenerateStickFigures2.0
1
0
0
0
0
317
NT-GenerateStickFigures2CV
1
0
0
0
0
318
NT-GenerateStickFiguresCV
1
0
0
0
0
319
NT-iClusterPlus
1
0
0
0
0
320
NT-LegoPlotter2.0
1
0
0
0
0
321
NT-LegoPlotter2CV
1
0
0
0
0
322
NT-LegoPlotterCV
1
0
0
0
0
323
NT-Methylation_Clustering_CNMF
0
1
0
0
0
324
NT-miR_Clustering_CNMF
1
0
0
0
0
325
NT-miR_Clustering_Consensus_Plus
1
0
0
0
0
326
NT-miR_FindDirectTargets
1
0
0
0
0
327
NT-miRseq_Clustering_CNMF
0
1
0
0
0
328
NT-miRseq_Clustering_Consensus_Plus
0
1
0
0
0
329
NT-miRseq_FindDirectTargets
0
1
0
0
0
330
NT-miRseq_Mature_Clustering_CNMF
0
1
0
0
0
331
NT-miRseq_Mature_Clustering_Consensus_Plus
0
1
0
0
0
332
NT-mRNA_Clustering_CNMF
1
0
0
0
0
333
NT-mRNA_Clustering_Consensus_Plus
1
0
0
0
0
334
NT-mRNAseq_Clustering_CNMF
0
1
0
0
0
335
NT-mRNAseq_Clustering_Consensus_Plus
0
0
0
1
0
336
NT-Mutation_APOBEC
1
0
0
0
0
337
NT-Mutation_Assessor
1
0
0
0
0
338
NT-Mutation_CHASM
1
0
0
0
0
339
NT-Mutation_CoOccurrence
1
0
0
0
0
340
NT-Mutation_CoOccurrence_Custom
1
0
0
0
0
341
NT-MutSigNozzleReport2.0
1
0
0
0
0
342
NT-MutSigNozzleReport2CV
1
0
0
0
0
343
NT-MutSigNozzleReportCV
1
0
0
0
0
344
NT-MutSigPreprocess2.0
1
0
0
0
0
345
NT-MutSigRun2.0
1
0
0
0
0
346
NT-MutSigRun2CV
1
0
0
0
0
347
NT-MutSigRunCV
1
0
0
0
0
348
NT-Paradigm_mRNA
1
0
0
0
0
349
NT-Paradigm_mRNA_And_CopyNumber
1
0
0
0
0
350
NT-Paradigm_Prepare_mRNA
1
0
0
0
0
351
NT-Paradigm_Prepare_mRNA_And_Copy_Number
1
0
0
0
0
352
NT-Paradigm_Prepare_RNASeq
1
0
0
0
0
353
NT-Paradigm_Prepare_RNASeq_And_Copy_Number
1
0
0
0
0
354
NT-Paradigm_Preprocess_mRNA
1
0
0
0
0
355
NT-ParadigmPreprocess_mRNA
1
0
0
0
0
356
NT-Paradigm_Preprocess_mRNA_And_Copy_Number
1
0
0
0
0
357
NT-ParadigmPreprocess_RNASeq
0
1
0
0
0
358
NT-Paradigm_Preprocess_RNASeq
1
0
0
0
0
359
NT-Paradigm_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
360
NT-Paradigm_Report_Preprocess_mRNA
1
0
0
0
0
361
NT-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
1
0
0
0
0
362
NT-Paradigm_Report_Preprocess_RNASeq
1
0
0
0
0
363
NT-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
364
NT-Paradigm_RNASeq
1
0
0
0
0
365
NT-Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
366
NT-Pathway_FindEnrichedGenes
1
0
0
0
0
367
NT-Pathway_GSEA_mRNAseq
1
0
0
0
0
368
NT-Pathway_Hotnet
1
0
0
0
0
369
NT-Pathway_Overlaps_MSigDB_MutSig2CV
1
0
0
0
0
370
NT-Pathway_Paradigm_mRNA
1
0
0
0
0
371
NT-Pathway_Paradigm_mRNA_And_Copy_Number
1
0
0
0
0
372
NT-Pathway_Paradigm_RNASeq
1
0
0
0
0
373
NT-Pathway_Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
374
NT-ProcessCoverageForMutSig2.0
1
0
0
0
0
375
NT-RPPA_Clustering_CNMF
1
0
0
0
0
376
NT-RPPA_Clustering_Consensus_Plus
1
0
0
0
0
377
NB-Aggregate_AnalysisFeatures
0
1
0
0
0
378
NB-Aggregate_Gene_Status
1
0
0
0
0
379
NB-Aggregate_Molecular_Subtype_Clusters
1
0
0
0
0
380
NB-Append_CustomClinical
0
1
0
0
0
381
NB-CoMut2.0
1
0
0
0
0
382
NB-CoMut2CV
1
0
0
0
0
383
NB-CoMutCV
1
0
0
0
0
384
NB-CopyNumber_Clustering_CNMF
1
0
0
0
0
385
NB-CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
386
NB-CopyNumber_Gistic2
0
1
0
0
0
387
NB-CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
388
NB-CopyNumberLowPass_Gistic2
0
1
0
0
0
389
NB-Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
390
NB-Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
391
NB-Correlate_Clinical_vs_Methylation
1
0
0
0
0
392
NB-Correlate_Clinical_vs_miR
1
0
0
0
0
393
NB-Correlate_Clinical_vs_miRseq
1
0
0
0
0
394
NB-Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
395
NB-Correlate_Clinical_vs_mRNA
1
0
0
0
0
396
NB-Correlate_Clinical_vs_mRNAseq
1
0
0
0
0
397
NB-Correlate_Clinical_vs_Mutation
1
0
0
0
0
398
NB-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
1
0
0
0
0
399
NB-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
1
0
0
0
0
400
NB-Correlate_Clinical_vs_MutationRate
1
0
0
0
0
401
NB-Correlate_Clinical_vs_RPPA
1
0
0
0
0
402
NB-Correlate_CopyNumber_vs_miR
1
0
0
0
0
403
NB-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
404
NB-Correlate_CopyNumber_vs_mRNAseq
1
0
0
0
0
405
NB-Correlate_Methylation_vs_mRNA
1
0
0
0
0
406
NB-Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
407
NB-Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
408
NB-Correlate_molecularSubtype_vs_Mutation
1
0
0
0
0
409
NB-Correlate_mRNAseq_vs_Mutation_APOBEC
1
0
0
0
0
410
NB-GenerateStickFigures2.0
1
0
0
0
0
411
NB-GenerateStickFigures2CV
1
0
0
0
0
412
NB-GenerateStickFiguresCV
1
0
0
0
0
413
NB-iClusterPlus
1
0
0
0
0
414
NB-LegoPlotter2.0
1
0
0
0
0
415
NB-LegoPlotter2CV
1
0
0
0
0
416
NB-LegoPlotterCV
1
0
0
0
0
417
NB-Methylation_Clustering_CNMF
1
0
0
0
0
418
NB-miR_Clustering_CNMF
1
0
0
0
0
419
NB-miR_Clustering_Consensus_Plus
1
0
0
0
0
420
NB-miR_FindDirectTargets
1
0
0
0
0
421
NB-miRseq_Clustering_CNMF
1
0
0
0
0
422
NB-miRseq_Clustering_Consensus_Plus
1
0
0
0
0
423
NB-miRseq_FindDirectTargets
1
0
0
0
0
424
NB-miRseq_Mature_Clustering_CNMF
1
0
0
0
0
425
NB-miRseq_Mature_Clustering_Consensus_Plus
1
0
0
0
0
426
NB-mRNA_Clustering_CNMF
1
0
0
0
0
427
NB-mRNA_Clustering_Consensus_Plus
1
0
0
0
0
428
NB-mRNAseq_Clustering_CNMF
1
0
0
0
0
429
NB-mRNAseq_Clustering_Consensus_Plus
1
0
0
0
0
430
NB-Mutation_APOBEC
1
0
0
0
0
431
NB-Mutation_Assessor
1
0
0
0
0
432
NB-Mutation_CHASM
1
0
0
0
0
433
NB-Mutation_CoOccurrence
1
0
0
0
0
434
NB-Mutation_CoOccurrence_Custom
1
0
0
0
0
435
NB-MutSigNozzleReport2.0
1
0
0
0
0
436
NB-MutSigNozzleReport2CV
1
0
0
0
0
437
NB-MutSigNozzleReportCV
1
0
0
0
0
438
NB-MutSigPreprocess2.0
1
0
0
0
0
439
NB-MutSigRun2.0
1
0
0
0
0
440
NB-MutSigRun2CV
1
0
0
0
0
441
NB-MutSigRunCV
1
0
0
0
0
442
NB-Paradigm_mRNA
1
0
0
0
0
443
NB-Paradigm_mRNA_And_CopyNumber
1
0
0
0
0
444
NB-Paradigm_Prepare_mRNA
1
0
0
0
0
445
NB-Paradigm_Prepare_mRNA_And_Copy_Number
1
0
0
0
0
446
NB-Paradigm_Prepare_RNASeq
1
0
0
0
0
447
NB-Paradigm_Prepare_RNASeq_And_Copy_Number
1
0
0
0
0
448
NB-Paradigm_Preprocess_mRNA
1
0
0
0
0
449
NB-ParadigmPreprocess_mRNA
1
0
0
0
0
450
NB-Paradigm_Preprocess_mRNA_And_Copy_Number
1
0
0
0
0
451
NB-Paradigm_Preprocess_RNASeq
1
0
0
0
0
452
NB-ParadigmPreprocess_RNASeq
1
0
0
0
0
453
NB-Paradigm_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
454
NB-Paradigm_Report_Preprocess_mRNA
1
0
0
0
0
455
NB-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
1
0
0
0
0
456
NB-Paradigm_Report_Preprocess_RNASeq
1
0
0
0
0
457
NB-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
458
NB-Paradigm_RNASeq
1
0
0
0
0
459
NB-Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
460
NB-Pathway_FindEnrichedGenes
1
0
0
0
0
461
NB-Pathway_GSEA_mRNAseq
1
0
0
0
0
462
NB-Pathway_Hotnet
1
0
0
0
0
463
NB-Pathway_Overlaps_MSigDB_MutSig2CV
1
0
0
0
0
464
NB-Pathway_Paradigm_mRNA
1
0
0
0
0
465
NB-Pathway_Paradigm_mRNA_And_Copy_Number
1
0
0
0
0
466
NB-Pathway_Paradigm_RNASeq
1
0
0
0
0
467
NB-Pathway_Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
468
NB-ProcessCoverageForMutSig2.0
1
0
0
0
0
469
NB-RPPA_Clustering_CNMF
1
0
0
0
0
470
NB-RPPA_Clustering_Consensus_Plus
1
0
0
0
0
471
FFPE-Aggregate_AnalysisFeatures
0
1
0
0
0
472
FFPE-Aggregate_Gene_Status
1
0
0
0
0
473
FFPE-Aggregate_Molecular_Subtype_Clusters
1
0
0
0
0
474
FFPE-Append_CustomClinical
1
0
0
0
0
475
FFPE-CoMut2.0
1
0
0
0
0
476
FFPE-CoMut2CV
1
0
0
0
0
477
FFPE-CoMutCV
1
0
0
0
0
478
FFPE-CopyNumber_Clustering_CNMF
1
0
0
0
0
479
FFPE-CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
480
FFPE-CopyNumber_Gistic2
0
1
0
0
0
481
FFPE-CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
482
FFPE-CopyNumberLowPass_Gistic2
1
0
0
0
0
483
FFPE-Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
484
FFPE-Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
485
FFPE-Correlate_Clinical_vs_Methylation
1
0
0
0
0
486
FFPE-Correlate_Clinical_vs_miR
1
0
0
0
0
487
FFPE-Correlate_Clinical_vs_miRseq
1
0
0
0
0
488
FFPE-Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
489
FFPE-Correlate_Clinical_vs_mRNA
1
0
0
0
0
490
FFPE-Correlate_Clinical_vs_mRNAseq
1
0
0
0
0
491
FFPE-Correlate_Clinical_vs_Mutation
1
0
0
0
0
492
FFPE-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
1
0
0
0
0
493
FFPE-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
1
0
0
0
0
494
FFPE-Correlate_Clinical_vs_MutationRate
1
0
0
0
0
495
FFPE-Correlate_Clinical_vs_RPPA
1
0
0
0
0
496
FFPE-Correlate_CopyNumber_vs_miR
1
0
0
0
0
497
FFPE-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
498
FFPE-Correlate_CopyNumber_vs_mRNAseq
1
0
0
0
0
499
FFPE-Correlate_Methylation_vs_mRNA
1
0
0
0
0
500
FFPE-Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
501
FFPE-Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
502
FFPE-Correlate_molecularSubtype_vs_Mutation
1
0
0
0
0
503
FFPE-Correlate_mRNAseq_vs_Mutation_APOBEC
1
0
0
0
0
504
FFPE-GenerateStickFigures2.0
1
0
0
0
0
505
FFPE-GenerateStickFigures2CV
1
0
0
0
0
506
FFPE-GenerateStickFiguresCV
1
0
0
0
0
507
FFPE-iClusterPlus
1
0
0
0
0
508
FFPE-LegoPlotter2.0
1
0
0
0
0
509
FFPE-LegoPlotter2CV
1
0
0
0
0
510
FFPE-LegoPlotterCV
1
0
0
0
0
511
FFPE-Methylation_Clustering_CNMF
0
1
0
0
0
512
FFPE-miR_Clustering_CNMF
1
0
0
0
0
513
FFPE-miR_Clustering_Consensus_Plus
1
0
0
0
0
514
FFPE-miR_FindDirectTargets
1
0
0
0
0
515
FFPE-miRseq_Clustering_CNMF
1
0
0
0
0
516
FFPE-miRseq_Clustering_Consensus_Plus
1
0
0
0
0
517
FFPE-miRseq_FindDirectTargets
1
0
0
0
0
518
FFPE-miRseq_Mature_Clustering_CNMF
1
0
0
0
0
519
FFPE-miRseq_Mature_Clustering_Consensus_Plus
1
0
0
0
0
520
FFPE-mRNA_Clustering_CNMF
1
0
0
0
0
521
FFPE-mRNA_Clustering_Consensus_Plus
1
0
0
0
0
522
FFPE-mRNAseq_Clustering_CNMF
1
0
0
0
0
523
FFPE-mRNAseq_Clustering_Consensus_Plus
1
0
0
0
0
524
FFPE-Mutation_APOBEC
1
0
0
0
0
525
FFPE-Mutation_Assessor
1
0
0
0
0
526
FFPE-Mutation_CHASM
1
0
0
0
0
527
FFPE-Mutation_CoOccurrence
1
0
0
0
0
528
FFPE-Mutation_CoOccurrence_Custom
1
0
0
0
0
529
FFPE-MutSigNozzleReport2.0
1
0
0
0
0
530
FFPE-MutSigNozzleReport2CV
1
0
0
0
0
531
FFPE-MutSigNozzleReportCV
1
0
0
0
0
532
FFPE-MutSigPreprocess2.0
1
0
0
0
0
533
FFPE-MutSigRun2.0
1
0
0
0
0
534
FFPE-MutSigRun2CV
1
0
0
0
0
535
FFPE-MutSigRunCV
1
0
0
0
0
536
FFPE-Paradigm_mRNA
1
0
0
0
0
537
FFPE-Paradigm_mRNA_And_CopyNumber
1
0
0
0
0
538
FFPE-Paradigm_Prepare_mRNA
1
0
0
0
0
539
FFPE-Paradigm_Prepare_mRNA_And_Copy_Number
1
0
0
0
0
540
FFPE-Paradigm_Prepare_RNASeq
1
0
0
0
0
541
FFPE-Paradigm_Prepare_RNASeq_And_Copy_Number
1
0
0
0
0
542
FFPE-Paradigm_Preprocess_mRNA
1
0
0
0
0
543
FFPE-ParadigmPreprocess_mRNA
1
0
0
0
0
544
FFPE-Paradigm_Preprocess_mRNA_And_Copy_Number
1
0
0
0
0
545
FFPE-Paradigm_Preprocess_RNASeq
1
0
0
0
0
546
FFPE-ParadigmPreprocess_RNASeq
1
0
0
0
0
547
FFPE-Paradigm_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
548
FFPE-Paradigm_Report_Preprocess_mRNA
1
0
0
0
0
549
FFPE-Paradigm_Report_Preprocess_mRNA_And_CopyNumber
1
0
0
0
0
550
FFPE-Paradigm_Report_Preprocess_RNASeq
1
0
0
0
0
551
FFPE-Paradigm_Report_Preprocess_RNASeq_And_Copy_Number
1
0
0
0
0
552
FFPE-Paradigm_RNASeq
1
0
0
0
0
553
FFPE-Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
554
FFPE-Pathway_FindEnrichedGenes
1
0
0
0
0
555
FFPE-Pathway_GSEA_mRNAseq
1
0
0
0
0
556
FFPE-Pathway_Hotnet
1
0
0
0
0
557
FFPE-Pathway_Overlaps_MSigDB_MutSig2CV
1
0
0
0
0
558
FFPE-Pathway_Paradigm_mRNA
1
0
0
0
0
559
FFPE-Pathway_Paradigm_mRNA_And_Copy_Number
1
0
0
0
0
560
FFPE-Pathway_Paradigm_RNASeq
1
0
0
0
0
561
FFPE-Pathway_Paradigm_RNASeq_And_Copy_Number
1
0
0
0
0
562
FFPE-ProcessCoverageForMutSig2.0
1
0
0
0
0
563
FFPE-RPPA_Clustering_CNMF
1
0
0
0
0
564
FFPE-RPPA_Clustering_Consensus_Plus
1
0
0
0
0
565
Aggregate_AnalysisFeatures
0
0
0
0
1
566
Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
567
CopyNumber_Clustering_CNMF
0
0
0
1
0
568
CopyNumber_Clustering_CNMF_thresholded
0
0
0
1
0
569
CopyNumber_Gistic2
0
0
0
1
0
570
CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
571
Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
572
Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
573
Correlate_Clinical_vs_Methylation
1
0
0
0
0
574
Correlate_Clinical_vs_miR
0
1
0
0
0
575
Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
576
Correlate_Clinical_vs_mRNA
0
0
0
1
0
577
Correlate_Clinical_vs_Mutation
1
0
0
0
0
578
Correlate_CopyNumber_vs_miR
0
0
0
1
0
579
Correlate_CopyNumber_vs_mRNA
0
0
0
1
0
580
Correlate_Methylation_vs_mRNA
1
0
0
0
0
581
Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
582
Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
583
Methylation_Clustering_CNMF
1
0
0
0
0
584
Methylation_Preprocess
1
0
0
0
0
585
miR_FindDirectTargets
0
0
0
1
0
586
miR_Mature_Clustering_CNMF
0
0
0
1
0
587
miR_Mature_Clustering_Consensus_Plus
0
0
0
1
0
588
miR_Mature_Preprocess
0
0
0
1
0
589
mRNA_lincRNA_Clustering_Consensus_Plus
0
0
0
1
0
590
mRNA_lincRNA_CNMF
0
0
0
1
0
591
mRNA_Preprocess
0
0
0
1
0
592
mRNA_protein_coding_Clustering_CNMF
0
0
0
1
0
593
mRNA_protein_coding_Clustering_Consensus_Plus
0
0
0
1
0
594
Mutation_APOBEC
0
1
0
0
0
595
Mutation_CoOccurrence
1
0
0
0
0
596
Mutation_Signature
0
1
0
0
0
597
Pathway_GSEA_mRNA
0
0
0
1
0
598
Aggregate_AnalysisFeatures
0
1
0
0
0
599
Aggregate_Molecular_Subtype_Clusters
1
0
0
0
0
600
CopyNumber_Clustering_CNMF
1
0
0
0
0
601
CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
602
CopyNumber_Gistic2
0
0
0
0
1
603
CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
604
Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
605
Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
606
Correlate_Clinical_vs_Methylation
1
0
0
0
0
607
Correlate_Clinical_vs_miR
1
0
0
0
0
608
Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
609
Correlate_Clinical_vs_mRNA
1
0
0
0
0
610
Correlate_Clinical_vs_Mutation
1
0
0
0
0
611
Correlate_CopyNumber_vs_miR
1
0
0
0
0
612
Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
613
Correlate_Methylation_vs_mRNA
1
0
0
0
0
614
Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
615
Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
616
Methylation_Clustering_CNMF
1
0
0
0
0
617
Methylation_Preprocess
1
0
0
0
0
618
miR_FindDirectTargets
1
0
0
0
0
619
miR_Mature_Clustering_CNMF
1
0
0
0
0
620
miR_Mature_Clustering_Consensus_Plus
1
0
0
0
0
621
miR_Mature_Preprocess
0
0
0
1
0
622
mRNA_lincRNA_Clustering_Consensus_Plus
0
0
0
0
1
623
mRNA_lincRNA_CNMF
0
0
0
0
1
624
mRNA_Preprocess
0
0
0
1
0
625
mRNA_protein_coding_Clustering_CNMF
0
0
0
0
1
626
mRNA_protein_coding_Clustering_Consensus_Plus
0
0
0
0
1
627
Mutation_APOBEC
0
1
0
0
0
628
Mutation_CoOccurrence
1
0
0
0
0
629
Mutation_Signature
0
1
0
0
0
630
Pathway_GSEA_mRNA
1
0
0
0
0
631
Aggregate_AnalysisFeatures
0
0
0
0
1
632
Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
633
CopyNumber_Clustering_CNMF
0
0
0
1
0
634
CopyNumber_Clustering_CNMF_thresholded
0
0
0
1
0
635
CopyNumber_Gistic2
0
0
0
1
0
636
CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
637
Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
638
Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
639
Correlate_Clinical_vs_Methylation
1
0
0
0
0
640
Correlate_Clinical_vs_miR
0
1
0
0
0
641
Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
642
Correlate_Clinical_vs_mRNA
0
0
0
1
0
643
Correlate_Clinical_vs_Mutation
1
0
0
0
0
644
Correlate_CopyNumber_vs_miR
0
0
0
1
0
645
Correlate_CopyNumber_vs_mRNA
0
0
0
1
0
646
Correlate_Methylation_vs_mRNA
1
0
0
0
0
647
Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
648
Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
649
Methylation_Clustering_CNMF
1
0
0
0
0
650
Methylation_Preprocess
1
0
0
0
0
651
miR_FindDirectTargets
0
0
0
1
0
652
miR_Mature_Clustering_CNMF
0
0
0
1
0
653
miR_Mature_Clustering_Consensus_Plus
0
0
0
1
0
654
miR_Mature_Preprocess
0
0
0
1
0
655
mRNA_lincRNA_Clustering_Consensus_Plus
0
0
0
1
0
656
mRNA_lincRNA_CNMF
0
0
0
1
0
657
mRNA_Preprocess
0
0
0
1
0
658
mRNA_protein_coding_Clustering_CNMF
0
0
0
1
0
659
mRNA_protein_coding_Clustering_Consensus_Plus
0
0
0
1
0
660
Mutation_APOBEC
0
1
0
0
0
661
Mutation_CoOccurrence
1
0
0
0
0
662
Mutation_Signature
0
1
0
0
0
663
Pathway_GSEA_mRNA
0
0
0
0
1
664
Aggregate_AnalysisFeatures
0
1
0
0
0
665
Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
666
CopyNumber_Clustering_CNMF
1
0
0
0
0
667
CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
668
CopyNumber_Gistic2
0
0
0
0
1
669
CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
670
Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
671
Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
672
Correlate_Clinical_vs_Methylation
1
0
0
0
0
673
Correlate_Clinical_vs_miR
0
1
0
0
0
674
Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
675
Correlate_Clinical_vs_mRNA
0
0
0
1
0
676
Correlate_Clinical_vs_Mutation
1
0
0
0
0
677
Correlate_CopyNumber_vs_miR
1
0
0
0
0
678
Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
679
Correlate_Methylation_vs_mRNA
1
0
0
0
0
680
Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
681
Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
682
Methylation_Clustering_CNMF
1
0
0
0
0
683
Methylation_Preprocess
1
0
0
0
0
684
miR_FindDirectTargets
0
0
0
1
0
685
miR_Mature_Clustering_CNMF
0
0
0
1
0
686
miR_Mature_Clustering_Consensus_Plus
0
0
0
1
0
687
miR_Mature_Preprocess
0
0
0
1
0
688
mRNA_lincRNA_Clustering_Consensus_Plus
0
0
0
0
1
689
mRNA_lincRNA_CNMF
0
0
0
0
1
690
mRNA_Preprocess
0
0
0
1
0
691
mRNA_protein_coding_Clustering_CNMF
0
0
0
0
1
692
mRNA_protein_coding_Clustering_Consensus_Plus
0
0
0
0
1
693
Mutation_APOBEC
1
0
0
0
0
694
Mutation_CoOccurrence
1
0
0
0
0
695
Mutation_Signature
1
0
0
0
0
696
Pathway_GSEA_mRNA
0
0
0
0
1
697
Aggregate_AnalysisFeatures
0
1
0
0
0
698
Aggregate_Molecular_Subtype_Clusters
1
0
0
0
0
699
CopyNumber_Clustering_CNMF
1
0
0
0
0
700
CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
701
CopyNumber_Gistic2
0
0
0
0
1
702
CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
703
Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
704
Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
705
Correlate_Clinical_vs_Methylation
1
0
0
0
0
706
Correlate_Clinical_vs_miR
1
0
0
0
0
707
Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
708
Correlate_Clinical_vs_mRNA
1
0
0
0
0
709
Correlate_Clinical_vs_Mutation
1
0
0
0
0
710
Correlate_CopyNumber_vs_miR
1
0
0
0
0
711
Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
712
Correlate_Methylation_vs_mRNA
1
0
0
0
0
713
Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
714
Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
715
Methylation_Clustering_CNMF
1
0
0
0
0
716
Methylation_Preprocess
1
0
0
0
0
717
miR_FindDirectTargets
1
0
0
0
0
718
miR_Mature_Clustering_CNMF
1
0
0
0
0
719
miR_Mature_Clustering_Consensus_Plus
1
0
0
0
0
720
miR_Mature_Preprocess
1
0
0
0
0
721
mRNA_lincRNA_Clustering_Consensus_Plus
1
0
0
0
0
722
mRNA_lincRNA_CNMF
1
0
0
0
0
723
mRNA_Preprocess
1
0
0
0
0
724
mRNA_protein_coding_Clustering_CNMF
1
0
0
0
0
725
mRNA_protein_coding_Clustering_Consensus_Plus
1
0
0
0
0
726
Mutation_APOBEC
1
0
0
0
0
727
Mutation_CoOccurrence
1
0
0
0
0
728
Mutation_Signature
1
0
0
0
0
729
Pathway_GSEA_mRNA
1
0
0
0
0
730
Aggregate_AnalysisFeatures
0
1
0
0
0
731
Aggregate_Molecular_Subtype_Clusters
1
0
0
0
0
732
CopyNumber_Clustering_CNMF
1
0
0
0
0
733
CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
734
CopyNumber_Gistic2
0
1
0
0
0
735
CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
736
Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
737
Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
738
Correlate_Clinical_vs_Methylation
1
0
0
0
0
739
Correlate_Clinical_vs_miR
1
0
0
0
0
740
Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
741
Correlate_Clinical_vs_mRNA
1
0
0
0
0
742
Correlate_Clinical_vs_Mutation
1
0
0
0
0
743
Correlate_CopyNumber_vs_miR
1
0
0
0
0
744
Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
745
Correlate_Methylation_vs_mRNA
1
0
0
0
0
746
Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
747
Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
748
Methylation_Clustering_CNMF
1
0
0
0
0
749
Methylation_Preprocess
1
0
0
0
0
750
miR_FindDirectTargets
1
0
0
0
0
751
miR_Mature_Clustering_CNMF
1
0
0
0
0
752
miR_Mature_Clustering_Consensus_Plus
1
0
0
0
0
753
miR_Mature_Preprocess
0
1
0
0
0
754
mRNA_lincRNA_Clustering_Consensus_Plus
1
0
0
0
0
755
mRNA_lincRNA_CNMF
1
0
0
0
0
756
mRNA_Preprocess
0
1
0
0
0
757
mRNA_protein_coding_Clustering_CNMF
1
0
0
0
0
758
mRNA_protein_coding_Clustering_Consensus_Plus
1
0
0
0
0
759
Mutation_APOBEC
0
1
0
0
0
760
Mutation_CoOccurrence
1
0
0
0
0
761
Mutation_Signature
0
1
0
0
0
762
Pathway_GSEA_mRNA
1
0
0
0
0
Total
605
84
0
58
15
This table generated on Thu Jan 26 11:04:29 2017