Broad GDAC Analyses Status
dev Run for Tumor Type: KIRP

CohortBCRClinicalCNLowPMethylationmRNAmRNASeqmiRmiRSeqRPPAMAF
KIRP3232232890242162890291207161

Note that the links below require Broad internal Firehose login credentials.

PipelineNotRunnableRunnableInProcessSuccessfulUnsuccessful
1Clinical_Pick_Tier100010
2CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB10000
3CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT10000
4CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB10000
5CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT10000
6CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB10000
7CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT10000
8CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB10000
9CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT10000
10CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB10000
11CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT10000
12Merge_Clinical00010
13Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data10000
14Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg10000
15Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
16Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg10000
17Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data10000
18Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg10000
19Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
20Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg10000
21Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg10000
22Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data10000
23Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data10000
24Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data10000
25Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
26Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data00010
27Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data00010
28Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
29Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data10000
30Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
31Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data10000
32Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
33Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data00010
34Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data00010
35Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data00010
36Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data00010
37Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data00010
38Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
39Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
40Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
41Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data10000
42Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data10000
43Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
44Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
45Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
46Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
47Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data00010
48Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data00010
49Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data00010
50Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data10000
51Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data10000
52Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data10000
53Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data10000
54Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data10000
55Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data00010
56Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data00010
57Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data00010
58Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data00010
59Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data00010
60Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data10000
61Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed00010
62Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data10000
63Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data10000
64Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data10000
65Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data10000
66Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg00010
67Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg00010
68Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg00010
69Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg00010
70Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data10000
71Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data10000
72Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
73Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data10000
74Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data10000
75Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data10000
76Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
77Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg10000
78Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg10000
79Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg10000
80Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data10000
81Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data10000
82Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
83Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data10000
84Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data10000
85Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data10000
86Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
87Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg10000
88Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg10000
89Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg10000
90Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
91Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
92Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
93Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
94Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data00010
95Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data00010
96Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data10000
97Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data10000
98mRNAseq_Preprocess00010
99Mutation_Packager_Calls01000
100Mutation_Packager_Coverage01000
101RPPA_AnnotateWithGene00010
102TP-Clinical_Pick_Tier100010
103TP-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB10000
104TP-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT10000
105TP-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB10000
106TP-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT10000
107TP-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB10000
108TP-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT10000
109TP-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB10000
110TP-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT10000
111TP-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB10000
112TP-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT10000
113TP-Merge_Clinical00010
114TP-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data10000
115TP-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg10000
116TP-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
117TP-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg10000
118TP-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data10000
119TP-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg10000
120TP-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
121TP-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg10000
122TP-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg10000
123TP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data10000
124TP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data10000
125TP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data10000
126TP-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
127TP-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data00010
128TP-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data00010
129TP-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
130TP-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data10000
131TP-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
132TP-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data10000
133TP-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
134TP-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data00010
135TP-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data00010
136TP-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data00010
137TP-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data00010
138TP-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data00010
139TP-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
140TP-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
141TP-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
142TP-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data10000
143TP-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data10000
144TP-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
145TP-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
146TP-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
147TP-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
148TP-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data00010
149TP-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data00010
150TP-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data00010
151TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data10000
152TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data10000
153TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data10000
154TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data10000
155TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data10000
156TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data00010
157TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data00010
158TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data00010
159TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data00010
160TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data00010
161TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data10000
162TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed00010
163TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data10000
164TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data10000
165TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data10000
166TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data10000
167TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg00010
168TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg00010
169TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg00010
170TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg00010
171TP-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data10000
172TP-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data10000
173TP-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
174TP-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data10000
175TP-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data10000
176TP-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data10000
177TP-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
178TP-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg10000
179TP-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg10000
180TP-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg10000
181TP-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data10000
182TP-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data10000
183TP-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
184TP-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data10000
185TP-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data10000
186TP-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data10000
187TP-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
188TP-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg10000
189TP-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg10000
190TP-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg10000
191TP-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
192TP-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
193TP-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
194TP-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
195TP-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data00010
196TP-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data00010
197TP-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data10000
198TP-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data10000
199TP-mRNAseq_Preprocess00010
200TP-Mutation_Packager_Calls01000
201TP-Mutation_Packager_Coverage01000
202TP-RPPA_AnnotateWithGene00010
203TAP-Clinical_Pick_Tier110000
204TAP-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB10000
205TAP-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT10000
206TAP-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB10000
207TAP-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT10000
208TAP-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB10000
209TAP-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT10000
210TAP-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB10000
211TAP-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT10000
212TAP-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB10000
213TAP-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT10000
214TAP-Merge_Clinical10000
215TAP-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data10000
216TAP-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg10000
217TAP-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
218TAP-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg10000
219TAP-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data10000
220TAP-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg10000
221TAP-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
222TAP-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg10000
223TAP-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg10000
224TAP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data10000
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300TAP-mRNAseq_Preprocess00010
301TAP-Mutation_Packager_Calls10000
302TAP-Mutation_Packager_Coverage10000
303TAP-RPPA_AnnotateWithGene01000
304NT-Clinical_Pick_Tier100010
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306NT-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT10000
307NT-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB10000
308NT-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT10000
309NT-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB10000
310NT-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT01000
311NT-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB10000
312NT-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT10000
313NT-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB10000
314NT-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT10000
315NT-Merge_Clinical00010
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362NT-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data00010
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364NT-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed00010
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370NT-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg00010
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372NT-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg00010
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375NT-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
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381NT-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg10000
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401NT-mRNAseq_Preprocess00010
402NT-Mutation_Packager_Calls10000
403NT-Mutation_Packager_Coverage10000
404NT-RPPA_AnnotateWithGene10000
405NB-Clinical_Pick_Tier100010
406NB-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB10000
407NB-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT10000
408NB-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB10000
409NB-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT10000
410NB-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB10000
411NB-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT10000
412NB-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB10000
413NB-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT10000
414NB-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB10000
415NB-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT10000
416NB-Merge_Clinical00010
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418NB-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg10000
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424NB-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg10000
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436NB-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
437NB-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data10000
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439NB-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data10000
440NB-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data10000
441NB-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data10000
442NB-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
443NB-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
444NB-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
445NB-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data10000
446NB-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data10000
447NB-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
448NB-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
449NB-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
450NB-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
451NB-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data10000
452NB-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data10000
453NB-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
454NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data10000
455NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data10000
456NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data10000
457NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data10000
458NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data10000
459NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data10000
460NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data10000
461NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data10000
462NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data10000
463NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data10000
464NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data10000
465NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed00010
466NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data10000
467NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data10000
468NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data10000
469NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data10000
470NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg00010
471NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg00010
472NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg00010
473NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg00010
474NB-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data10000
475NB-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data10000
476NB-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
477NB-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data10000
478NB-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data10000
479NB-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data10000
480NB-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
481NB-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg10000
482NB-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg10000
483NB-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg10000
484NB-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data10000
485NB-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data10000
486NB-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
487NB-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data10000
488NB-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data10000
489NB-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data10000
490NB-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
491NB-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg10000
492NB-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg10000
493NB-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg10000
494NB-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
495NB-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
496NB-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
497NB-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
498NB-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
499NB-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
500NB-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data10000
501NB-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data10000
502NB-mRNAseq_Preprocess10000
503NB-Mutation_Packager_Calls10000
504NB-Mutation_Packager_Coverage10000
505NB-RPPA_AnnotateWithGene10000
Total41460850

This table generated on Wed Feb 18 16:34:01 2015