Broad GDAC Analyses Status
dev Run for Tumor Type: UVM

CohortBCRClinicalCNLowPMethylationmRNAmRNASeqmiRmiRSeqRPPAMAF
UVM8008008008007900

Note that the links below require Broad internal Firehose login credentials.

PipelineNotRunnableRunnableInProcessSuccessfulUnsuccessful
1Clinical_Pick_Tier110000
2CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB10000
3CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT10000
4CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB10000
5CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT10000
6CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB10000
7CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT10000
8CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB10000
9CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT10000
10CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB10000
11CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT10000
12Merge_Clinical10000
13Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data10000
14Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg10000
15Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
16Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg10000
17Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data10000
18Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg10000
19Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
20Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg10000
21Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg10000
22Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data10000
23Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data10000
24Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data10000
25Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
26Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data10000
27Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data00010
28Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
29Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data10000
30Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
31Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data10000
32Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
33Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data10000
34Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data10000
35Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data00010
36Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data00010
37Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data10000
38Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
39Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
40Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
41Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data10000
42Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data10000
43Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
44Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
45Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
46Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
47Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data10000
48Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data10000
49Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
50Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data10000
51Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data10000
52Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data10000
53Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data10000
54Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data10000
55Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data00010
56Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data00010
57Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data00010
58Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data00010
59Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data00010
60Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data10000
61Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed00010
62Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data10000
63Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data10000
64Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data10000
65Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data10000
66Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg00010
67Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg00010
68Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg00010
69Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg00010
70Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data10000
71Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data10000
72Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
73Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data10000
74Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data10000
75Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data10000
76Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
77Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg10000
78Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg10000
79Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg10000
80Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data10000
81Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data10000
82Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
83Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data10000
84Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data10000
85Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data10000
86Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
87Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg10000
88Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg10000
89Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg10000
90Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
91Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
92Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
93Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
94Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
95Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
96Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data10000
97Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data10000
98mRNAseq_Preprocess00010
99Mutation_Packager_Calls10000
100Mutation_Packager_Coverage10000
101RPPA_AnnotateWithGene10000
102TP-Clinical_Pick_Tier110000
103TP-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB10000
104TP-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT10000
105TP-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB10000
106TP-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT10000
107TP-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB10000
108TP-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT10000
109TP-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB10000
110TP-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT10000
111TP-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB10000
112TP-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT10000
113TP-Merge_Clinical10000
114TP-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data10000
115TP-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg10000
116TP-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
117TP-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg10000
118TP-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data10000
119TP-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg10000
120TP-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
121TP-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg10000
122TP-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg10000
123TP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data10000
124TP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data10000
125TP-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data10000
126TP-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
127TP-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data10000
128TP-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data00010
129TP-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
130TP-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data10000
131TP-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
132TP-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data10000
133TP-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
134TP-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data10000
135TP-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data10000
136TP-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data00010
137TP-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data00010
138TP-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data10000
139TP-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
140TP-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
141TP-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
142TP-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data10000
143TP-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data10000
144TP-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
145TP-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
146TP-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
147TP-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
148TP-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data10000
149TP-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data10000
150TP-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
151TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data10000
152TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data10000
153TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data10000
154TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data10000
155TP-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data10000
156TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data00010
157TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data00010
158TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data00010
159TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data00010
160TP-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data00010
161TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data10000
162TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed00010
163TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data10000
164TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data10000
165TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data10000
166TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data10000
167TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg00010
168TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg00010
169TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg00010
170TP-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg00010
171TP-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data10000
172TP-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data10000
173TP-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
174TP-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data10000
175TP-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data10000
176TP-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data10000
177TP-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
178TP-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg10000
179TP-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg10000
180TP-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg10000
181TP-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data10000
182TP-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data10000
183TP-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
184TP-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data10000
185TP-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data10000
186TP-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data10000
187TP-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
188TP-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg10000
189TP-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg10000
190TP-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg10000
191TP-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
192TP-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
193TP-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
194TP-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
195TP-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
196TP-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
197TP-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data10000
198TP-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data10000
199TP-mRNAseq_Preprocess00010
200TP-Mutation_Packager_Calls10000
201TP-Mutation_Packager_Coverage10000
202TP-RPPA_AnnotateWithGene10000
203NB-Clinical_Pick_Tier110000
204NB-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NB10000
205NB-CreateLoadfile_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data_NT10000
206NB-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NB10000
207NB-CreateLoadfile_paradigm_mRNAseq_exp_RPKM_log2_NT10000
208NB-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NB10000
209NB-CreateLoadfile_paradigm_mRNAseq_exp_RSEM_log2_NT10000
210NB-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NB10000
211NB-CreateLoadfile_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data_NT10000
212NB-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NB10000
213NB-CreateLoadfile_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data_NT10000
214NB-Merge_Clinical10000
215NB-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_2__bioassay_data_transformation__data10000
216NB-Merge_cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg10000
217NB-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
218NB-Merge_cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg10000
219NB-Merge_cna__hg_cgh_244a__mskcc_org__Level_2__bioassay_data_transformation__data10000
220NB-Merge_cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg10000
221NB-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_2__lowess_global_normalization__data10000
222NB-Merge_cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg10000
223NB-Merge_cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg10000
224NB-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data10000
225NB-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data10000
226NB-Merge_exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data10000
227NB-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
228NB-Merge_methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data10000
229NB-Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data10000
230NB-Merge_methylation__illuminadnamethylation_oma003_cpi__jhu_usc_edu__Level_2__within_bioassay_data_set_function__data10000
231NB-Merge_mirna__h_mirna_8x15k__unc_edu__Level_2__unc_quantile_normalization__data10000
232NB-Merge_mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
233NB-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_2__unc_quantile_normalization__data10000
234NB-Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data10000
235NB-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data10000
236NB-Merge_mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data10000
237NB-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data10000
238NB-Merge_mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data10000
239NB-Merge_protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data10000
240NB-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
241NB-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
242NB-Merge_rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
243NB-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data10000
244NB-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data10000
245NB-Merge_rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
246NB-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data10000
247NB-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data10000
248NB-Merge_rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data10000
249NB-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data10000
250NB-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data10000
251NB-Merge_rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data10000
252NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__exon_quantification__data10000
253NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__junction_quantification__data10000
254NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes__data10000
255NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data10000
256NB-Merge_rnaseqv2__illuminaga_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data10000
257NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data10000
258NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data10000
259NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data10000
260NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data10000
261NB-Merge_rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data10000
262NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__after_5NN_copy_number__data10000
263NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed00010
264NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copynumber_byallele__data10000
265NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__copy_number__data10000
266NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__invariantset_medianpolish__data10000
267NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_2__no_outlier_copy_number__data10000
268NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg00010
269NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg00010
270NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg00010
271NB-Merge_snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg00010
272NB-Merge_snp__human1mduo__hudsonalpha_org__Level_1__XandYintensity__data10000
273NB-Merge_snp__human1mduo__hudsonalpha_org__Level_2__B_allele_freq__data10000
274NB-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
275NB-Merge_snp__human1mduo__hudsonalpha_org__Level_2__genotyping__data10000
276NB-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Normal_LogR__data10000
277NB-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Paired_LogR__data10000
278NB-Merge_snp__human1mduo__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
279NB-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg10000
280NB-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_cnv__seg10000
281NB-Merge_snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg10000
282NB-Merge_snp__humanhap550__hudsonalpha_org__Level_1__XandYintensity__data10000
283NB-Merge_snp__humanhap550__hudsonalpha_org__Level_2__B_allele_freq__data10000
284NB-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Delta_B_allele_freq__data10000
285NB-Merge_snp__humanhap550__hudsonalpha_org__Level_2__genotyping__data10000
286NB-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Normal_LogR__data10000
287NB-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Paired_LogR__data10000
288NB-Merge_snp__humanhap550__hudsonalpha_org__Level_2__Unpaired_LogR__data10000
289NB-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg10000
290NB-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_cnv__seg10000
291NB-Merge_snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg10000
292NB-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
293NB-Merge_transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
294NB-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
295NB-Merge_transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
296NB-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data10000
297NB-Merge_transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data10000
298NB-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data10000
299NB-Merge_transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data10000
300NB-mRNAseq_Preprocess10000
301NB-Mutation_Packager_Calls10000
302NB-Mutation_Packager_Coverage10000
303NB-RPPA_AnnotateWithGene10000
Total27000330

This table generated on Wed Feb 18 16:34:18 2015