Broad GDAC Analyses Status
gdc_dev Run for Tumor Type: TCGA-LAML
Note that the links below require Broad internal Firehose login credentials.
Pipeline
NotRunnable
Runnable
InProcess
Successful
Unsuccessful
1
Aggregate_AnalysisFeatures
0
0
0
1
0
2
Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
3
CopyNumber_Clustering_CNMF
0
0
0
1
0
4
CopyNumber_Clustering_CNMF_thresholded
0
0
0
1
0
5
CopyNumber_Gistic2
0
0
0
1
0
6
CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
7
Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
8
Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
9
Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
10
Correlate_Clinical_vs_mRNA
0
0
0
1
0
11
Correlate_CopyNumber_vs_miR
0
0
0
1
0
12
Correlate_CopyNumber_vs_mRNA
0
0
0
1
0
13
Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
14
Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
15
miR_FindDirectTargets
0
0
0
1
0
16
miR_Mature_Clustering_CNMF
0
0
0
1
0
17
miR_Mature_Clustering_Consensus_Plus
0
0
0
1
0
18
miR_Mature_Preprocess
0
0
0
1
0
19
mRNA_lincRNA_Clustering_Consensus_Plus
0
0
0
1
0
20
mRNA_lincRNA_CNMF
0
0
0
1
0
21
mRNA_Preprocess
0
0
0
1
0
22
mRNA_protein_coding_Clustering_CNMF
0
0
0
1
0
23
mRNA_protein_coding_Clustering_Consensus_Plus
0
0
0
1
0
24
Mutation_CoOccurrence
0
0
0
0
1
25
Pathway_GSEA_mRNA
0
0
0
0
1
26
TB-Aggregate_AnalysisFeatures
0
0
0
1
0
27
TB-Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
28
TB-CopyNumber_Clustering_CNMF
0
0
0
1
0
29
TB-CopyNumber_Clustering_CNMF_thresholded
0
0
0
1
0
30
TB-CopyNumber_Gistic2
0
0
0
1
0
31
TB-CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
32
TB-Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
33
TB-Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
34
TB-Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
35
TB-Correlate_Clinical_vs_mRNA
0
0
0
1
0
36
TB-Correlate_CopyNumber_vs_miR
0
0
0
1
0
37
TB-Correlate_CopyNumber_vs_mRNA
0
0
0
1
0
38
TB-Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
39
TB-Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
40
TB-miR_FindDirectTargets
0
0
0
1
0
41
TB-miR_Mature_Clustering_CNMF
0
0
0
1
0
42
TB-miR_Mature_Clustering_Consensus_Plus
0
0
0
1
0
43
TB-miR_Mature_Preprocess
0
0
0
1
0
44
TB-mRNA_lincRNA_Clustering_Consensus_Plus
0
0
0
1
0
45
TB-mRNA_lincRNA_CNMF
0
0
0
1
0
46
TB-mRNA_Preprocess
0
0
0
1
0
47
TB-mRNA_protein_coding_Clustering_CNMF
0
0
0
1
0
48
TB-mRNA_protein_coding_Clustering_Consensus_Plus
0
0
0
1
0
49
TB-Mutation_CoOccurrence
0
0
0
0
1
50
TB-Pathway_GSEA_mRNA
0
0
0
0
1
51
NT-Aggregate_AnalysisFeatures
0
1
0
0
0
52
NT-Aggregate_Molecular_Subtype_Clusters
1
0
0
0
0
53
NT-CopyNumber_Clustering_CNMF
1
0
0
0
0
54
NT-CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
55
NT-CopyNumber_Gistic2
0
0
0
0
1
56
NT-CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
57
NT-Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
58
NT-Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
59
NT-Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
60
NT-Correlate_Clinical_vs_mRNA
1
0
0
0
0
61
NT-Correlate_CopyNumber_vs_miR
1
0
0
0
0
62
NT-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
63
NT-Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
64
NT-Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
65
NT-miR_FindDirectTargets
1
0
0
0
0
66
NT-miR_Mature_Clustering_CNMF
1
0
0
0
0
67
NT-miR_Mature_Clustering_Consensus_Plus
1
0
0
0
0
68
NT-miR_Mature_Preprocess
1
0
0
0
0
69
NT-mRNA_lincRNA_Clustering_Consensus_Plus
1
0
0
0
0
70
NT-mRNA_lincRNA_CNMF
1
0
0
0
0
71
NT-mRNA_Preprocess
1
0
0
0
0
72
NT-mRNA_protein_coding_Clustering_CNMF
1
0
0
0
0
73
NT-mRNA_protein_coding_Clustering_Consensus_Plus
1
0
0
0
0
74
NT-Mutation_CoOccurrence
1
0
0
0
0
75
NT-Pathway_GSEA_mRNA
1
0
0
0
0
Total
23
1
0
46
5
This table generated on Sat Nov 5 12:09:33 2016