Broad GDAC gdc_dev Run Status : TCGA-PCPG

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	Pipeline	NotRunnable	Runnable	Successful	Unsuccessful
1	Aggregate_AnalysisFeatures	0	0	0	1
2	Aggregate_Molecular_Subtype_Clusters	0	0	1	0
3	CopyNumber_Clustering_CNMF	0	0	1	0
4	CopyNumber_Clustering_CNMF_thresholded	0	0	1	0
5	CopyNumber_Gistic2	0	0	1	0
6	CopyNumber_Gistic2_Postprocess_Focal	0	0	1	0
7	Correlate_Clinical_vs_CopyNumber_Arm	0	0	1	0
8	Correlate_Clinical_vs_CopyNumber_Focal	0	0	1	0
9	Correlate_Clinical_vs_Molecular_Subtypes	0	0	1	0
10	Correlate_Clinical_vs_mRNA	0	0	1	0
11	Correlate_CopyNumber_vs_miR	0	0	1	0
12	Correlate_CopyNumber_vs_mRNA	0	0	1	0
13	Correlate_molecularSubtype_vs_CopyNumber_Arm	0	0	1	0
14	Correlate_molecularSubtype_vs_CopyNumber_Focal	0	0	1	0
15	miR_FindDirectTargets	0	0	1	0
16	miR_Mature_Clustering_CNMF	0	0	1	0
17	miR_Mature_Clustering_Consensus_Plus	0	0	1	0
18	miR_Mature_Preprocess	0	0	1	0
19	mRNA_lincRNA_Clustering_Consensus_Plus	0	0	1	0
20	mRNA_lincRNA_CNMF	0	0	1	0
21	mRNA_Preprocess	0	0	1	0
22	mRNA_protein_coding_Clustering_CNMF	0	0	1	0
23	mRNA_protein_coding_Clustering_Consensus_Plus	0	0	1	0
24	Mutation_CoOccurrence	1	0	0	0
25	Pathway_GSEA_mRNA	0	0	0	1
26	TP-Aggregate_AnalysisFeatures	0	0	1	0
27	TP-Aggregate_Molecular_Subtype_Clusters	0	0	1	0
28	TP-CopyNumber_Clustering_CNMF	0	0	1	0
29	TP-CopyNumber_Clustering_CNMF_thresholded	0	0	1	0
30	TP-CopyNumber_Gistic2	0	0	1	0
31	TP-CopyNumber_Gistic2_Postprocess_Focal	0	0	1	0
32	TP-Correlate_Clinical_vs_CopyNumber_Arm	0	0	1	0
33	TP-Correlate_Clinical_vs_CopyNumber_Focal	0	0	1	0
34	TP-Correlate_Clinical_vs_Molecular_Subtypes	0	0	1	0
35	TP-Correlate_Clinical_vs_mRNA	0	0	1	0
36	TP-Correlate_CopyNumber_vs_miR	0	0	1	0
37	TP-Correlate_CopyNumber_vs_mRNA	0	0	1	0
38	TP-Correlate_molecularSubtype_vs_CopyNumber_Arm	0	0	1	0
39	TP-Correlate_molecularSubtype_vs_CopyNumber_Focal	0	0	1	0
40	TP-miR_FindDirectTargets	0	0	1	0
41	TP-miR_Mature_Clustering_CNMF	0	0	1	0
42	TP-miR_Mature_Clustering_Consensus_Plus	0	0	1	0
43	TP-miR_Mature_Preprocess	0	0	1	0
44	TP-mRNA_lincRNA_Clustering_Consensus_Plus	0	0	1	0
45	TP-mRNA_lincRNA_CNMF	0	0	1	0
46	TP-mRNA_Preprocess	0	0	1	0
47	TP-mRNA_protein_coding_Clustering_CNMF	0	0	1	0
48	TP-mRNA_protein_coding_Clustering_Consensus_Plus	0	0	1	0
49	TP-Mutation_CoOccurrence	0	0	1	0
50	TP-Pathway_GSEA_mRNA	0	0	0	1
51	TM-Aggregate_AnalysisFeatures	0	0	0	1
52	TM-Aggregate_Molecular_Subtype_Clusters	1	0	0	0
53	TM-CopyNumber_Clustering_CNMF	1	0	0	0
54	TM-CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
55	TM-CopyNumber_Gistic2	0	0	1	0
56	TM-CopyNumber_Gistic2_Postprocess_Focal	0	0	1	0
57	TM-Correlate_Clinical_vs_CopyNumber_Arm	0	0	0	1
58	TM-Correlate_Clinical_vs_CopyNumber_Focal	0	0	0	1
59	TM-Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
60	TM-Correlate_Clinical_vs_mRNA	0	0	0	1
61	TM-Correlate_CopyNumber_vs_miR	1	0	0	0
62	TM-Correlate_CopyNumber_vs_mRNA	0	0	1	0
63	TM-Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
64	TM-Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
65	TM-miR_FindDirectTargets	1	0	0	0
66	TM-miR_Mature_Clustering_CNMF	1	0	0	0
67	TM-miR_Mature_Clustering_Consensus_Plus	1	0	0	0
68	TM-miR_Mature_Preprocess	0	0	1	0
69	TM-mRNA_lincRNA_Clustering_Consensus_Plus	0	0	0	1
70	TM-mRNA_lincRNA_CNMF	0	0	0	1
71	TM-mRNA_Preprocess	0	0	1	0
72	TM-mRNA_protein_coding_Clustering_CNMF	0	0	0	1
73	TM-mRNA_protein_coding_Clustering_Consensus_Plus	0	0	0	1
74	TM-Mutation_CoOccurrence	1	0	0	0
75	TM-Pathway_GSEA_mRNA	1	0	0	0
76	TAP-Aggregate_AnalysisFeatures	0	0	1	0
77	TAP-Aggregate_Molecular_Subtype_Clusters	1	0	0	0
78	TAP-CopyNumber_Clustering_CNMF	1	0	0	0
79	TAP-CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
80	TAP-CopyNumber_Gistic2	0	0	1	0
81	TAP-CopyNumber_Gistic2_Postprocess_Focal	0	0	1	0
82	TAP-Correlate_Clinical_vs_CopyNumber_Arm	0	0	0	1
83	TAP-Correlate_Clinical_vs_CopyNumber_Focal	0	0	0	1
84	TAP-Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
85	TAP-Correlate_Clinical_vs_mRNA	0	0	0	1
86	TAP-Correlate_CopyNumber_vs_miR	1	0	0	0
87	TAP-Correlate_CopyNumber_vs_mRNA	0	0	1	0
88	TAP-Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
89	TAP-Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
90	TAP-miR_FindDirectTargets	1	0	0	0
91	TAP-miR_Mature_Clustering_CNMF	1	0	0	0
92	TAP-miR_Mature_Clustering_Consensus_Plus	1	0	0	0
93	TAP-miR_Mature_Preprocess	0	0	1	0
94	TAP-mRNA_lincRNA_Clustering_Consensus_Plus	0	0	0	1
95	TAP-mRNA_lincRNA_CNMF	0	0	0	1
96	TAP-mRNA_Preprocess	0	0	1	0
97	TAP-mRNA_protein_coding_Clustering_CNMF	0	0	0	1
98	TAP-mRNA_protein_coding_Clustering_Consensus_Plus	0	0	0	1
99	TAP-Mutation_CoOccurrence	0	0	0	1
100	TAP-Pathway_GSEA_mRNA	1	0	0	0
101	NT-Aggregate_AnalysisFeatures	0	1	0	0
102	NT-Aggregate_Molecular_Subtype_Clusters	1	0	0	0
103	NT-CopyNumber_Clustering_CNMF	1	0	0	0
104	NT-CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
105	NT-CopyNumber_Gistic2	0	0	0	1
106	NT-CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
107	NT-Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
108	NT-Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
109	NT-Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
110	NT-Correlate_Clinical_vs_mRNA	0	0	0	1
111	NT-Correlate_CopyNumber_vs_miR	1	0	0	0
112	NT-Correlate_CopyNumber_vs_mRNA	1	0	0	0
113	NT-Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
114	NT-Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
115	NT-miR_FindDirectTargets	1	0	0	0
116	NT-miR_Mature_Clustering_CNMF	1	0	0	0
117	NT-miR_Mature_Clustering_Consensus_Plus	1	0	0	0
118	NT-miR_Mature_Preprocess	0	0	1	0
119	NT-mRNA_lincRNA_Clustering_Consensus_Plus	0	0	0	1
120	NT-mRNA_lincRNA_CNMF	0	0	0	1
121	NT-mRNA_Preprocess	0	0	1	0
122	NT-mRNA_protein_coding_Clustering_CNMF	0	0	0	1
123	NT-mRNA_protein_coding_Clustering_Consensus_Plus	0	0	0	1
124	NT-Mutation_CoOccurrence	1	0	0	0
125	NT-Pathway_GSEA_mRNA	1	0	0	0
126	NB-Aggregate_AnalysisFeatures	0	1	0	0
127	NB-Aggregate_Molecular_Subtype_Clusters	1	0	0	0
128	NB-CopyNumber_Clustering_CNMF	1	0	0	0
129	NB-CopyNumber_Clustering_CNMF_thresholded	1	0	0	0
130	NB-CopyNumber_Gistic2	0	0	0	1
131	NB-CopyNumber_Gistic2_Postprocess_Focal	1	0	0	0
132	NB-Correlate_Clinical_vs_CopyNumber_Arm	1	0	0	0
133	NB-Correlate_Clinical_vs_CopyNumber_Focal	1	0	0	0
134	NB-Correlate_Clinical_vs_Molecular_Subtypes	1	0	0	0
135	NB-Correlate_Clinical_vs_mRNA	1	0	0	0
136	NB-Correlate_CopyNumber_vs_miR	1	0	0	0
137	NB-Correlate_CopyNumber_vs_mRNA	1	0	0	0
138	NB-Correlate_molecularSubtype_vs_CopyNumber_Arm	1	0	0	0
139	NB-Correlate_molecularSubtype_vs_CopyNumber_Focal	1	0	0	0
140	NB-miR_FindDirectTargets	1	0	0	0
141	NB-miR_Mature_Clustering_CNMF	1	0	0	0
142	NB-miR_Mature_Clustering_Consensus_Plus	1	0	0	0
143	NB-miR_Mature_Preprocess	1	0	0	0
144	NB-mRNA_lincRNA_Clustering_Consensus_Plus	1	0	0	0
145	NB-mRNA_lincRNA_CNMF	1	0	0	0
146	NB-mRNA_Preprocess	1	0	0	0
147	NB-mRNA_protein_coding_Clustering_CNMF	1	0	0	0
148	NB-mRNA_protein_coding_Clustering_Consensus_Plus	1	0	0	0
149	NB-Mutation_CoOccurrence	1	0	0	0
150	NB-Pathway_GSEA_mRNA	1	0	0	0
	Total	63	2	59	26

This table generated on Sat Nov 5 12:09:35 2016

Broad GDAC Analyses Status gdc_dev Run for Tumor Type: TCGA-PCPG

Broad GDAC Analyses Status
gdc_dev Run for Tumor Type: TCGA-PCPG