Broad GDAC Analyses Status
gdc_dev Run for Tumor Type: TCGA-UVM
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Pipeline
NotRunnable
Runnable
InProcess
Successful
Unsuccessful
1
Aggregate_AnalysisFeatures
0
0
0
1
0
2
Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
3
CopyNumber_Clustering_CNMF
0
0
0
1
0
4
CopyNumber_Clustering_CNMF_thresholded
0
0
0
1
0
5
CopyNumber_Gistic2
0
0
0
1
0
6
CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
7
Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
8
Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
9
Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
10
Correlate_Clinical_vs_mRNA
0
0
0
1
0
11
Correlate_CopyNumber_vs_miR
0
0
0
1
0
12
Correlate_CopyNumber_vs_mRNA
0
0
0
1
0
13
Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
14
Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
15
miR_FindDirectTargets
0
0
0
1
0
16
miR_Mature_Clustering_CNMF
0
0
0
1
0
17
miR_Mature_Clustering_Consensus_Plus
0
0
0
1
0
18
miR_Mature_Preprocess
0
0
0
1
0
19
mRNA_lincRNA_Clustering_Consensus_Plus
0
0
0
1
0
20
mRNA_lincRNA_CNMF
0
0
0
1
0
21
mRNA_Preprocess
0
0
0
1
0
22
mRNA_protein_coding_Clustering_CNMF
0
0
0
1
0
23
mRNA_protein_coding_Clustering_Consensus_Plus
0
0
0
1
0
24
Mutation_CoOccurrence
0
0
0
1
0
25
Pathway_GSEA_mRNA
0
0
0
0
1
26
TP-Aggregate_AnalysisFeatures
0
0
0
1
0
27
TP-Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
28
TP-CopyNumber_Clustering_CNMF
0
0
0
1
0
29
TP-CopyNumber_Clustering_CNMF_thresholded
0
0
0
1
0
30
TP-CopyNumber_Gistic2
0
0
0
1
0
31
TP-CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
32
TP-Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
33
TP-Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
34
TP-Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
35
TP-Correlate_Clinical_vs_mRNA
0
0
0
1
0
36
TP-Correlate_CopyNumber_vs_miR
0
0
0
1
0
37
TP-Correlate_CopyNumber_vs_mRNA
0
0
0
1
0
38
TP-Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
39
TP-Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
40
TP-miR_FindDirectTargets
0
0
0
1
0
41
TP-miR_Mature_Clustering_CNMF
0
0
0
1
0
42
TP-miR_Mature_Clustering_Consensus_Plus
0
0
0
1
0
43
TP-miR_Mature_Preprocess
0
0
0
1
0
44
TP-mRNA_lincRNA_Clustering_Consensus_Plus
0
0
0
1
0
45
TP-mRNA_lincRNA_CNMF
0
0
0
1
0
46
TP-mRNA_Preprocess
0
0
0
1
0
47
TP-mRNA_protein_coding_Clustering_CNMF
0
0
0
1
0
48
TP-mRNA_protein_coding_Clustering_Consensus_Plus
0
0
0
1
0
49
TP-Mutation_CoOccurrence
0
0
0
1
0
50
TP-Pathway_GSEA_mRNA
0
0
0
0
1
51
NB-Aggregate_AnalysisFeatures
0
1
0
0
0
52
NB-Aggregate_Molecular_Subtype_Clusters
1
0
0
0
0
53
NB-CopyNumber_Clustering_CNMF
1
0
0
0
0
54
NB-CopyNumber_Clustering_CNMF_thresholded
1
0
0
0
0
55
NB-CopyNumber_Gistic2
0
0
0
0
1
56
NB-CopyNumber_Gistic2_Postprocess_Focal
1
0
0
0
0
57
NB-Correlate_Clinical_vs_CopyNumber_Arm
1
0
0
0
0
58
NB-Correlate_Clinical_vs_CopyNumber_Focal
1
0
0
0
0
59
NB-Correlate_Clinical_vs_Molecular_Subtypes
1
0
0
0
0
60
NB-Correlate_Clinical_vs_mRNA
1
0
0
0
0
61
NB-Correlate_CopyNumber_vs_miR
1
0
0
0
0
62
NB-Correlate_CopyNumber_vs_mRNA
1
0
0
0
0
63
NB-Correlate_molecularSubtype_vs_CopyNumber_Arm
1
0
0
0
0
64
NB-Correlate_molecularSubtype_vs_CopyNumber_Focal
1
0
0
0
0
65
NB-miR_FindDirectTargets
1
0
0
0
0
66
NB-miR_Mature_Clustering_CNMF
1
0
0
0
0
67
NB-miR_Mature_Clustering_Consensus_Plus
1
0
0
0
0
68
NB-miR_Mature_Preprocess
1
0
0
0
0
69
NB-mRNA_lincRNA_Clustering_Consensus_Plus
1
0
0
0
0
70
NB-mRNA_lincRNA_CNMF
1
0
0
0
0
71
NB-mRNA_Preprocess
1
0
0
0
0
72
NB-mRNA_protein_coding_Clustering_CNMF
1
0
0
0
0
73
NB-mRNA_protein_coding_Clustering_Consensus_Plus
1
0
0
0
0
74
NB-Mutation_CoOccurrence
1
0
0
0
0
75
NB-Pathway_GSEA_mRNA
1
0
0
0
0
Total
23
1
0
48
3
This table generated on Sat Nov 5 12:09:37 2016