Summary of TCGA Tumor Data
Ingested into Broad GDAC Pipeline
2016_01_28 integration Run

CohortBCRClinicalCNLowPMethylationmRNAmRNASeqmiRmiRSeqRPPAMAFrawMAF
ACC92929008007908046900
BLCA41241241011241204080409344130395
BRCA1098109710891910975261093010788879770
CESC30730729550307030403071731940
CHOL51453603603603630350
COAD460458451694571534570406360154367
COADREAD6316296161046222226230549491223489
DLBC58484804804804733480
ESCA18518518451185018401841261850
FPPP383800000023000
GBM61359557704205401605650238290290
GBMLGG11291110109052936567676565512668576806
HNSC52852852210852805200523212279510
KICH11311366066066066636666
KIPAN9739418830892888890873756644799
KIRC5375375280535725330516478417451
KIRP3232912890291162900291215161282
LAML20020019701940179018801970
LGG51651551352516275160512430286516
LIHC37737737003770371037263198373
LUAD585522516120578325150513365230542
LUSC504504501050315450104783281780
MESO8787870870870876300
OV6025915860594574304570453426316469
PAAD185185184018401780178123150184
PCPG179179175017901790179801790
PRAD49949949211549804970494352332498
READ1711711653516569166014313169122
SARC2612612570261025902592232470
SKCM47047046911847004690448353343366
STAD44344344210744304150436357289395
STES62862862615862805990620483474395
TGCT1501341500150015001501181490
THCA5035034999850305010502222402496
THYM124124123012401200124901230
UCEC5605485401065475454505384402480
UCS57575605705705648570
UVM808080518008008012800
Totals113681119610987121110972221710267113510156742970996322