Dear TCGA Colleagues,

Version 2012_07_25 of the Firehose stddata package has been released and will
be available in the protected data tree pending internal mirroring by the DCC.
Highlights of this run are given below, and in our dashboard release notes at

			http://gdac.broadinstitute.org

If you have any questions or comments please do not hesitate to send them to
our gdac@broadinstitute.org mailing list.


Regards,
Michael S. Noble
Broad Institute of MIT & Harvard

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* New Samples
	* BCR		+65	(6846 total)
	* Clinical	+6	(5633 total)
	* Methylation	+140	(5465 total)
	* mRNAseq	+170	(3460 total)
	* miRseq	+195	(3976 total)

* Pipelines now recognize WashU as submitting BCR where applicable, which e.g. adds LAML clinical samples to our data stream.
* The WIGs we fabricate to simulate coverage for MutSig have been
* updated to hg19 for:
	* BLCA
	* BRCA
	* CESC
	* KIRC
	* LUSC
	* LUAD
	* PRAD
	* STAD
	* UCEC
  This was done to address item (9) in our 2012_06_23 Analysis Run Release Notes