Observations
2016_07_15 Data Snapshot

Table 1.  Get Full Table

Barcode UUID Date Type Category Notes
TCGA-04-1335 ab3dbbbe-eed6-4a35-a505-1815225e86c9 07/30/2010 OV Item may not meet study protocol [schaefc]: Pathology indicates Stage I disease
TCGA-04-1351-11A 91b4c678-b371-4571-a201-d0f00cc458c6 07/30/2010 OV Normal class but appears diseased [schaefc]: Genomic data resembles tumor data
TCGA-04-1353-01A-01R-1048-01 b4d1d595-41fa-4b9d-9f01-e820fdace4f6 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-04-1353-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-04-1353 but seem to represent results for participant TCGA-09-2043
TCGA-04-1360 e0502c47-3234-4609-a8d5-730a9e6eb5b8 07/30/2010 OV Item may not meet study protocol [schaefc]: Pathology indicates Stage I disease
TCGA-04-1364 80f85c54-e12f-4afa-8fa5-5f3e083b6f95 10/28/2010 OV General This subject was duplicated by TCGA-24-0981; 0981 was redacted and this one retained
TCGA-04-1369-01A-02R-1048-01 940c48c2-f75f-498a-9c40-a33d65dfbce1 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-04-1369-01A-02R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-04-1369 but seem to represent results for participant TCGA-09-2044
TCGA-04-1371-11A 6fefb3d5-7fea-438f-8986-681082be8819 07/30/2010 OV Normal class but appears diseased [schaefc]: Genomic data resembles tumor data
TCGA-04-1516-01A-01R-1048-01 0c2520a9-0937-40b7-a09f-9f21a4726876 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-04-1516-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-04-1516 but seem to represent results for participant TCGA-09-2045
TCGA-04-1644-01B-01R-1048-01 5c14dcb5-1dd3-4eaa-a71a-e7b62d4698ee 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-04-1644-01B-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-04-1644 but seem to represent results for participant TCGA-09-2048
TCGA-06-0178 53abce1d-7e33-4ebd-832f-f3789f67377f 07/30/2010 GBM Normal class but appears diseased [schaefc]: Genomic data resembles tumor data
TCGA-06-0240-01A-01 (none) 07/30/2010 GBM Tumor class but appears normal [schaefc]: Dx slide resembles normal tissue
TCGA-06-0240-01A-02 58955a9c-b15c-41a1-8a98-bc997926c988 07/30/2010 GBM Tumor class but appears normal [schaefc]: Dx slide resembles normal tissue
TCGA-06-0240-01A-03 bfd417c5-c8f4-4759-a250-ee8f8aa57272 07/30/2010 GBM Tumor class but appears normal [schaefc]: Dx slide resembles normal tissue
TCGA-06-A6S1-10A-01D 0ff5d286-e53d-484e-9400-415687d729b7 11/19/2013 GBM General DNA analyte UUID: 0FF5D286-E53D-484E-9400-415687D729B7 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-07-0227 9320e9fd-9bb5-4ec0-9a59-acccdb0d7563 08/12/2013 MISC General " This is a 'test of the single-quote issue. this is a test of the ""add note feature, with single quote"" ""Single quote Adding another note."
TCGA-08-0386-11 (none) 07/30/2010 GBM Normal class but appears diseased [schaefc]: Genomic data resembles tumor data
TCGA-09-1675 0fc8777c-8f12-472f-a0ea-085139b35d1f 07/30/2010 OV Item may not meet study protocol [schaefc]: Pathology indicates Stage I disease
TCGA-09-2043-01A-01R-0709-01 dec0d15f-9489-4987-83ff-3613cf21c379 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-09-2043 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-04-1353
TCGA-09-2044-01B-01R-0709-01 0b4c7448-2729-45db-b1b2-0fba79016c76 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-09-2044 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-04-1369
TCGA-09-2045-01A-01R-0709-01 4456d296-bac1-461d-bda9-d3c52aba590c 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-09-2045 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-04-1516
TCGA-09-2048-01A-01R-0709-01 8d5f3a67-69eb-49b0-a1bc-f626eb70c76f 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-09-2048 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-04-1644
TCGA-09-2049-01D-01R-0709-01 870e7182-fd31-4863-b19b-001fb9a2a11d 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-09-2049 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-42-2582
TCGA-09-2050-01A-01R-0709-01 968defb5-7701-4ec8-9c4f-7b73a13b0411 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-09-2050 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-42-2587
TCGA-09-2051-01A-01R-0709-01 34b0a38d-33f0-436f-a30b-4c730a37e27c 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-09-2051 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-42-2588
TCGA-09-2055-01B-01R-0709-01 7c240854-d066-4ecd-905d-1f6dea67d509 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-09-2055 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-42-2589
TCGA-12-0615 141a1ef1-9be6-46d1-b445-305b222727d2 10/28/2010 GBM Item may not meet study protocol Case identified (by Duke) as a secondary GBM; original annotation 06/22/09
TCGA-12-0662 a3cc2845-8a44-4b50-8a3e-17a3c2c3e077 10/28/2010 GBM Item may not meet study protocol Case identified (by Duke) as a secondary GBM; original annotation 06/22/09
TCGA-12-0691 bb0aca6b-55ab-4b24-8e64-29e0c96a9862 10/28/2010 GBM Item may not meet study protocol Case identified (by Duke) as a secondary GBM; original annotation 06/22/09
TCGA-12-0769 29b34909-9cdc-4a52-b0ab-fa99f3ab17bb 10/28/2010 GBM Item may not meet study protocol Case identified (by Duke) as a secondary GBM; original annotation 06/22/09
TCGA-12-0818 e57b296a-80e9-4446-a3d1-3dbfeaf04f5e 10/28/2010 GBM Item may not meet study protocol Case identified (by Duke) as a secondary GBM; original annotation 06/22/09
TCGA-12-0819 025a7401-a65d-4ea0-8b4e-0ba775b0322a 10/28/2010 GBM Item may not meet study protocol Case identified (by Duke) as a secondary GBM; original annotation 06/22/09 Case identified (by Duke) as a secondary GBM; original annotation 06/22/14
TCGA-13-0791-02A-01R-0808-01 3038dbe5-a4fd-4ebf-b582-503b3041822b 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-13-0791 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-23-2649
TCGA-13-0913-02A-01R-0808-01 b9367a1a-2b4b-4beb-a02f-743f826bf85d 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-13-0913 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-59-2372
TCGA-13-1489-02A-01R-0808-01 141d2716-c6c3-4495-b30f-12dc204d77a3 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-13-1489 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2545
TCGA-13-1817-02A-01R-0808-01 29cf6928-081b-4498-89b3-89bd24b61608 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-13-1817 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-23-2645
TCGA-13-1819-01A-01R-0808-01 3816ef10-585d-4480-bee6-d3d3fe9cbef5 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-13-1819 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2551
TCGA-13-1819-02A-01R-0808-01 71492b0a-c202-4688-bb17-1828ed1d9d97 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-13-1819 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2551
TCGA-13-2057-01A-02R-1048-01 0b1c95cf-0eb2-4297-956e-85702b3bbbc3 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-13-2057-01A-02R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-13-2057 but seem to represent results for participant TCGA-24-2271
TCGA-13-2059-01A-01R-1048-01 96ef4c4d-9292-4281-b23d-8e29fe47119f 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-13-2059-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-13-2059 but seem to represent results for participant TCGA-24-2280
TCGA-13-2060-01A-01R-0709-01 60beab4b-53c5-4c97-af8f-21f4076b4850 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-13-2060 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-42-2590
TCGA-13-2061-01A-01R-1048-01 7183ed35-46c8-49c5-b247-09d01df7f6de 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-13-2061-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-13-2061 but seem to represent results for participant TCGA-24-2281
TCGA-13-2065-01A-01R-1048-01 d020829d-93e8-4b1d-9b6e-006efc029547 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-13-2065-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-13-2065 but seem to represent results for participant TCGA-24-2288
TCGA-13-2066-01A-01R-1048-01 bfe15bbc-6ec4-4c49-b86d-4b01aa23093a 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-13-2066-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-13-2066 but seem to represent results for participant TCGA-24-2289
TCGA-13-2071-01A-02R-1048-01 97c72a04-f6a3-4f0e-89ca-8b6a47ee6d25 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-13-2071-01A-02R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-13-2071 but seem to represent results for participant TCGA-24-2290
TCGA-23-2641-01A-01R-1048-01 c7559a8a-552e-44e1-97dd-d3a333a5e283 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-23-2641-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-23-2641 but seem to represent results for participant TCGA-24-2293
TCGA-23-2643-01A-01R-1048-01 02d0fc82-4de5-4543-88e1-b069652b6c4b 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-23-2643-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-23-2643 but seem to represent results for participant TCGA-24-2295
TCGA-23-2645-01A-01R-1048-01 f6880438-40e9-4c78-ac4b-fbdf71637a68 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-23-2645-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-23-2645 but seem to represent results for participant TCGA-13-1817
TCGA-23-2647-01A-01R-1048-01 f50b14e1-8106-4823-9bbd-68cf5f17189b 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-23-2647-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-23-2647 but seem to represent results for participant TCGA-24-2298
TCGA-23-2649-01A-01R-1048-01 408178f3-62ee-4c5d-a160-355deedc69c8 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-23-2649-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-23-2649 but seem to represent results for participant TCGA-13-0791
TCGA-24-1852-01A-01R-0808-01 8bc4b5b7-b987-475b-90f7-28c8bd19a0fa 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-1852 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2532
TCGA-24-1852-02A-01R-0808-01 7c459b65-7eca-4081-83f0-ff67f0410a9b 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-1852 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-29-2431
TCGA-24-2262-01A-01R-0709-01 8462f214-6bf7-4018-b40b-f9a3f3847542 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-2262 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-42-2591
TCGA-24-2267-01A-01R-0709-01 7d6e82dd-4715-42df-8325-444be465aa24 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-2267 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-42-2593
TCGA-24-2271-01A-01R-0709-01 3f1bd8a1-5a33-4c68-9d62-a65289c677dd 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-2271 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-13-2057
TCGA-24-2280-01A-01R-0709-01 964fcf21-982e-474f-ab2d-cfcb0bbd0e15 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-2280 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-13-2059
TCGA-24-2281-01A-01R-0709-01 0ca4dc50-aee3-49e2-b327-b86ddfce658f 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-2281 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-13-2061
TCGA-24-2288-01A-01R-0709-01 bea203c5-e349-4941-aa28-d3b9372ad7a2 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-2288 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-13-2065
TCGA-24-2289-01A-01R-0709-01 9ef0fcf7-e7c3-4c19-ab2b-185392963182 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-2289 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-13-2066
TCGA-24-2290-01A-01R-0709-01 ad9e04b7-2000-411e-81bd-d1d22381d5c8 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-2290 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-13-2071
TCGA-24-2293-01A-01R-0709-01 87480009-8495-4826-9d10-dbe6dc6281f1 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-2293 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-23-2641
TCGA-24-2295-01A-01R-0709-01 8a525a38-29e3-457d-a665-e05297e6b07a 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-2295 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-23-2643
TCGA-24-2297-01A-01R-0709-01 971a0b51-b807-436b-ac4c-ef9cc2e2038d 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-2297 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-61-2611
TCGA-24-2298-01A-01R-0709-01 9c71ce7f-4e80-46bc-b66c-c893614dd207 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-24-2298 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-23-2647
TCGA-25-2392-01A-01R-0709-01 62414e51-fd9a-4ed8-bc34-c4d194fdc884 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-25-2392 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-29-2432
TCGA-25-2393-01A-01R-0709-01 93d53663-d5fc-4a27-8844-d58f09f47c64 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-25-2393 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-29-2434
TCGA-25-2396-01A-01R-0709-01 5cbceba0-c820-45dc-926d-ee4893659503 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-25-2396 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-29-2436
TCGA-25-2397-01A-01R-0709-01 3faab68c-41ef-4eef-8ed1-1d5c7c5b9a8b 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-25-2397 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-61-2612
TCGA-25-2398-01A-01R-0709-01 bcdd8efe-1f50-4bb6-904a-b8bdfd32dfbd 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-25-2398 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2530
TCGA-25-2400-01A-01R-0709-01 1dab017a-bf35-4cec-9bef-f03b5c5b363c 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-25-2400 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2533
TCGA-25-2404-01A-01R-0709-01 df215206-d33b-40b7-94dc-86d5a3cfbc87 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-25-2404 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2537
TCGA-25-2408-01A-01R-0709-01 a693a4be-bb91-4608-bacb-4ffa101e413a 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-25-2408 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2538
TCGA-25-2409-01A-01R-0709-01 71b8d6ab-57cb-411e-89f3-9ea82e67abff 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-25-2409 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2539
TCGA-27-1838 6fc6b9ca-84d8-4647-bbc8-c5ab472b1c02 10/09/2015 GBM Item may not meet study protocol Pt treated with oxcarbazepine 11 days prior to procurement. According to the NIH, this drug is an anticonvulsant to treat seizures.
TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 10/09/2015 GBM Item may not meet study protocol Pt treated with dexmethasone and phenytoin sodium 6 days prior to procurement. According to the NIH, dexmethasone is an ancillary or hormone drug; SEER lists phenytoin sodium as an anticonvulsant to treat seizures.
TCGA-29-1692-01B-01R-0808-01 2ecbe10e-1afc-4a38-91ee-cb0cc670f254 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-29-1692 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-61-2610
TCGA-29-1704-01B-01R-0808-01 bbc42149-d2c4-44f9-a59f-bd9397bc96e8 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-29-1704 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2529
TCGA-29-1710-02A-01R-0808-01 4a8f0084-d5a6-4f5b-bc46-8494a2bfe6b1 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-29-1710 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2543
TCGA-29-1770-02A-01R-0808-01 4ccece6b-c6cf-4921-81e5-af3780afffbc 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-29-1770 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2534
TCGA-29-2414-01A-02R-0709-01 9d580db8-ad4f-4ecb-affd-e9ae032e8ebb 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-29-2414 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-61-2613
TCGA-29-2425-01A-01R-0709-01 572ffa30-3fd6-49b7-a250-f8505555bde9 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-29-2425 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2542
TCGA-29-2428-01A-01R-0709-01 b7c8f2a5-de96-4a38-bfa4-2a6c1b8ea1e2 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-29-2428 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2544
TCGA-29-2431-01A-01R-1048-01 88be95fd-3aa9-4279-91ff-e705db3e187c 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-29-2431-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-29-2431 but seem to represent results for participant TCGA-24-1852
TCGA-29-2432-01A-01R-1048-01 6fcda1cc-9224-452c-8fda-369e73f2f05e 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-29-2432-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-29-2432 but seem to represent results for participant TCGA-25-2392
TCGA-29-2434-01A-01R-1048-01 7b45cfcd-a37c-4f92-b35f-e75ac6b1d000 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-29-2434-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-29-2434 but seem to represent results for participant TCGA-25-2393
TCGA-29-2436-01A-01R-1048-01 e467e3e0-9311-48ff-8da8-f3b9118011e7 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-29-2436-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-29-2436 but seem to represent results for participant TCGA-25-2396
TCGA-2E-A9G8 9583c10b-b21a-4863-98fa-61e735e64ea5 09/19/2014 UCEC Item may not meet study protocol Per the tissue source site: chemotherapy is mentioned once in the medical record, however, there is no record of the chemotherapy being administered or any reference to chemo type treatment.
TCGA-2J-AABP a4569ce7-dde7-4660-a24c-409d294b2b8c 10/15/2014 PAAD Item may not meet study protocol PAAD EPC had insufficient evidence to include this as an undifferentiated ductal adenocarcinoma
TCGA-36-2529-01A-01R-1048-01 d63b58d4-56b8-4879-b103-74cb3f92c242 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2529-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2529 but seem to represent results for participant TCGA-29-1704
TCGA-36-2530-01A-01R-1048-01 f4fa786b-3eaf-45ab-9d3e-4cf7ec61de3c 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2530-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2530 but seem to represent results for participant TCGA-25-2398
TCGA-36-2532-01A-01R-1048-01 0830b9f6-0220-4c58-9c8b-58478ac2f49e 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2532-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2532 but seem to represent results for participant TCGA-24-1852
TCGA-36-2533-01A-01R-1048-01 06bf48f2-1c9a-42eb-bf68-505501a4c354 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2533-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2533 but seem to represent results for participant TCGA-25-2400
TCGA-36-2534-01A-01R-1048-01 39d1a308-db4f-4161-ad51-7cb9ccb4d059 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2534-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2534 but seem to represent results for participant TCGA-29-1770
TCGA-36-2537-01A-01R-1048-01 74f16c9d-4f75-4307-a243-35a387eb20db 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2537-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2537 but seem to represent results for participant TCGA-25-2404
TCGA-36-2538-01A-01R-1048-01 8e5e1961-d950-4ae8-9f07-1c5a10c82ad4 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2538-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2538 but seem to represent results for participant TCGA-25-2408
TCGA-36-2539-01A-01R-1048-01 f335ca72-d387-445f-a46c-542b608b2646 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2539-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2539 but seem to represent results for participant TCGA-25-2409
TCGA-36-2540-01A-01R-1048-01 75cee431-5541-49ea-a935-5e3b287f367b 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2540-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2540 but seem to represent results for participant TCGA-61-1916
TCGA-36-2542-01A-01R-1048-01 e4d9b54f-bf90-484f-9f85-06cd87712fd7 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2542-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2542 but seem to represent results for participant TCGA-29-2425
TCGA-36-2543-01A-01R-1048-01 c25023f6-f376-41b0-8346-3f898a11fd1f 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2543-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2543 but seem to represent results for participant TCGA-29-1710
TCGA-36-2544-01A-01R-1048-01 7f53f5f6-c900-4ebb-87d8-9e1edcbe1de5 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2544-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2544 but seem to represent results for participant TCGA-29-2428
TCGA-36-2545-01A-01R-1048-01 625f1165-c70d-4a7f-be3b-ff55aca5ca12 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2545-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2545 but seem to represent results for participant TCGA-13-1489
TCGA-36-2547-01A-01R-1048-01 40ca7354-e907-4a61-853e-c1d66651f9a3 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2547-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2547 but seem to represent results for participant TCGA-59-2349
TCGA-36-2548-01A-01R-1048-01 abe78829-2661-4c6e-ba83-03e06963d9aa 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2548-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2548 but seem to represent results for participant TCGA-59-2350
TCGA-36-2549-01A-01R-1048-01 3dac49f4-f485-4050-93d1-cbc22eef91d9 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2549-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2549 but seem to represent results for participant TCGA-59-2351
TCGA-36-2551-01A-01R-1048-01 543cc9e3-5fb6-4229-aedb-a55273230b98 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2551-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2551 but seem to represent results for participant TCGA-13-1819
TCGA-36-2552-01A-01R-1048-01 4f0b1c4b-e033-4679-a32a-9bf80ff6d42d 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-36-2552-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-36-2552 but seem to represent results for participant TCGA-59-2354
TCGA-38-4630 f1985735-a188-4567-a88a-530f9b80291b 08/31/2012 LUAD Item may not meet study protocol There was disagreement among clinicians as to whether the lung adenocarcinoma or uterine serous endometrial adenocarcinoma was the primary tumor. The endometrial adenocarcinoma was diagnosed 5 years prior to the so-called lung primary.
TCGA-42-2582-01A-01R-1048-01 7f63006e-7016-483d-9a09-7d535a342d3a 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-42-2582-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-42-2582 but seem to represent results for participant TCGA-09-2049
TCGA-42-2587-01A-01R-1048-01 e8013ca8-18e0-42ee-aa94-b7171902da03 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-42-2587-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-42-2587 but seem to represent results for participant TCGA-09-2050
TCGA-42-2588-01A-01R-1048-01 fd52301b-6882-4868-95e8-501ec794f7a8 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-42-2588-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-42-2588 but seem to represent results for participant TCGA-09-2051
TCGA-42-2589-01A-01R-1048-01 9add86b7-a9d7-41ea-8536-41a204c97ae1 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-42-2589-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-42-2589 but seem to represent results for participant TCGA-09-2055
TCGA-42-2590-01A-01R-1048-01 919946b9-3135-45fd-9fdd-b2d40c8bc3ba 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-42-2590-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-42-2590 but seem to represent results for participant TCGA-13-2060
TCGA-42-2591-01A-01R-1048-01 5c6e2798-32a6-4fb9-b246-c6267f7dfc51 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-42-2591-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-42-2591 but seem to represent results for participant TCGA-24-2262
TCGA-42-2593-01A-01R-1048-01 f5e8a865-c4eb-4043-9a8f-7979d3fe6532 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-42-2593-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-42-2593 but seem to represent results for participant TCGA-24-2267
TCGA-57-1992 419a486f-7fa5-4fbd-9e98-2f8f4c6d5081 07/30/2010 OV Item may not meet study protocol [schaefc]: Pathology indicates Stage I disease
TCGA-59-2349-01A-01R-0709-01 7557f686-ae87-4ab8-b7df-b1f1b0850e51 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-59-2349 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2547
TCGA-59-2350-01A-01R-0709-01 e5b094fc-335d-4a9e-9ead-d0bda9695e33 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-59-2350 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2548
TCGA-59-2351-01A-01R-0709-01 2c72e167-d9b6-47e2-ae10-3183a6d13e7a 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-59-2351 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2549
TCGA-59-2352-01A-01R-0709-01 87ec1cd8-27d3-4cde-a59b-58c82ab8cbbe 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-59-2352 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-61-2614
TCGA-59-2354-01A-01R-0709-01 e0e3aedf-ace3-4525-83c2-887b517837c0 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-59-2354 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2552
TCGA-59-2372-01A-01R-1048-01 b368a37f-fa86-47ae-9a1c-d1038f19a663 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-59-2372-01A-01R-1048-01 for the platform of HT_HG-U133A do not represent participant TCGA-59-2372 but seem to represent results for participant TCGA-13-0913
TCGA-60-2712 f355cd59-eaa9-46c7-ab07-b90a7afc875c 09/05/2013 LUSC General This subject was duplicated by TCGA-O2-A5IC; TCGA-O2-A5IC was redacted and this one retained
TCGA-61-1721-01A a65361d0-e9ae-4d90-bbf7-70bc213d263e 07/30/2010 OV Tumor class but appears normal [schaefc]: Genomic data resembles normal data
TCGA-61-1722 47feba88-1ec9-4904-b0e2-3718f294badb 07/30/2010 OV Item may not meet study protocol [schaefc]: Pathology indicates Stage I disease
TCGA-61-1727 99407c1d-40b5-4ded-ba29-1e40dfd65be4 07/30/2010 OV Item may not meet study protocol [schaefc]: Pathology indicates Stage I disease
TCGA-61-1730 107bd8af-13e6-4c6a-9bdc-83c08eaaff90 07/30/2010 OV Item may not meet study protocol [schaefc]: Pathology indicates Stage I disease
TCGA-61-1734 b5e64bdb-24f1-400d-aaf7-8fda8ab6fd3c 07/30/2010 OV Item may not meet study protocol [schaefc]: Pathology indicates Stage I disease
TCGA-61-1903 b3df9c0a-420c-4cc2-a3e0-56df1ed7e997 07/30/2010 OV Item may not meet study protocol [schaefc]: Pathology indicates Stage I disease
TCGA-61-1916-02A-01R-0808-01 6490d8bc-620c-45d2-9314-97ec1b52e4d0 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that a sample for the participant TCGA-61-1916 had been run in duplicate for the platform of HT_HG-U133A, with the second value being reported as results for TCGA-36-2540
TCGA-61-2018 13d6c31a-6899-4119-a5c2-90adcb5bd20c 07/30/2010 OV Item may not meet study protocol [schaefc]: Pathology indicates Stage I disease
TCGA-61-2096 6beaa1cb-a9f1-4127-898c-7aff2273788e 07/30/2010 OV Item may not meet study protocol [schaefc]: Pathology indicates Stage I disease
TCGA-61-2610-02A-01R-1139-01 30ed8178-1e57-4d4e-af54-ea8097a33bbe 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-61-2610-02A-01R-1139-01 for the platform of HT_HG-U133A do not represent participant TCGA-61-2610 but seem to represent results for participant TCGA-29-1692
TCGA-61-2611-02A-01R-1139-01 2983d372-ea74-4ceb-a26e-7b4e6a8acf8f 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-61-2611-02A-01R-1139-01 for the platform of HT_HG-U133A do not represent participant TCGA-61-2611 but seem to represent results for participant TCGA-24-2297
TCGA-61-2612-01A-01R-1139-01 9b739900-7aff-4e27-aa8b-5feaaaa77247 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-61-2612-01A-01R-1139-01 for the platform of HT_HG-U133A do not represent participant TCGA-61-2612 but seem to represent results for participant TCGA-25-2397
TCGA-61-2613-01A-01R-1139-01 4f3e6b8b-2c5b-4c59-aca0-d3a6b7ee46b5 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-61-2613-01A-01R-1139-01 for the platform of HT_HG-U133A do not represent participant TCGA-61-2613 but seem to represent results for participant TCGA-29-2414
TCGA-61-2614-01A-01R-1139-01 59193352-8a67-49d4-9ca0-430c36fe0d12 10/08/2013 OV General Pairwise comparisons of expression results between platforms HT_HG-U133A and AgilentG4502A_07 suggests that results of TCGA-61-2614-01A-01R-1139-01 for the platform of HT_HG-U133A do not represent participant TCGA-61-2614 but seem to represent results for participant TCGA-59-2352
TCGA-77-7138-01A-02-BS2 7ebacc9b-2f09-47d1-b3f5-01230b15b6b2 09/27/2013 LUSC General Slide barcode TCGA-77-7138-01A-02-BS2 differs from parent portion barcode TCGA-77-7138-01A-41
TCGA-77-7140-01A-02-BS2 88433ee8-9427-441b-b735-7ea2bf7e1a8f 09/27/2013 LUSC General Slide barcode TCGA-77-7140-01A-02-BS2 differs from parent portion barcode TCGA-77-7140-01A-41
TCGA-A3-A6NI-01A-11D 627df01e-7f2e-4232-aa4d-616748b38f66 10/21/2013 KIRC General DNA analyte UUID: 627DF01E-7F2E-4232-AA4D-616748B38F66 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-A3-A6NI-10A-01D b12cebe9-422e-4c2f-9ef5-710459b1fe4f 10/21/2013 KIRC General DNA analyte UUID: 7D358B42-361B-4146-B2B4-EFF236C2A0AB was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-A3-A6NJ-10A-01D 1e0f3b0b-7349-4aa9-a2a2-d949654ab5f5 10/21/2013 KIRC General DNA analyte UUID: 1E0F3B0B-7349-4AA9-A2A2-D949654AB5F5 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-A3-A6NJ-11A-11D 98f3c7f3-4db6-4d7b-a816-bfde19324507 10/21/2013 KIRC General DNA analyte UUID: 27602BB3-23D3-42A4-AF21-C8CE4D3A2724 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-A3-A6NL-01A-11D 29368134-1d72-41f9-9ef4-45e18ae7d77b 10/21/2013 KIRC General DNA analyte UUID: DE0A6BB4-58F3-44BE-96A5-3CC37E624322 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-A3-A6NL-10A-01D d2f95d94-2da2-4dbc-b5ee-550264442904 10/21/2013 KIRC General DNA analyte UUID: 44207730-1377-4188-936C-6810DC350BEF was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-A3-A6NL-11A-11D 12b7cfdd-36f1-44a4-b336-534880f50109 10/21/2013 KIRC General DNA analyte UUID: 89DAF05C-85C8-42FF-9C36-DBDC5F7A9C45 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-A3-A6NN-10A-01D f8a21ea5-10af-4a0b-809b-52c6053e842e 10/21/2013 KIRC General DNA analyte UUID: F8A21EA5-10AF-4A0B-809B-52C6053E842E was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-A7-A6VV-10A-01D e27e9375-d153-4d0d-80ea-19c0f58c6c60 10/21/2013 BRCA General DNA analyte UUID: E27E9375-D153-4D0D-80EA-19C0F58C6C60 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-A7-A6VW-10A-01D 5b31eb4a-2559-498b-9204-f6fd17338905 10/21/2013 BRCA General DNA analyte UUID: 5B31EB4A-2559-498B-9204-F6FD17338905 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-A7-A6VX-10A-01D 91ac9c48-a751-4e9a-96c3-558bb07c2754 10/21/2013 BRCA General DNA analyte UUID: 4C130AE4-B1AA-4EC6-BA88-6B32460E0F9C was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-A7-A6VY-10A-01D 04727f81-231a-4f9d-80ab-7fd3d3564a98 10/21/2013 BRCA General DNA analyte UUID: 96DB3A0E-2D63-4E79-BF6D-BC7D2FE60157 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-AA-3715 e394e9ec-7288-4ede-9ef8-41b631d100dd 02/26/2015 COAD Item may not meet study protocol This case was accepted into TCGA but the pathology report is not consistent with study specific metrics. The BCR will ICD code per the pathology report, which may not match the clinical data.
TCGA-AA-3811 d7ebd11a-1339-4b28-be90-a788d2cfa706 02/26/2015 COAD Item may not meet study protocol This case was accepted into TCGA but the pathology report is not consistent with study specific metrics. The BCR will ICD code per the pathology report, which may not match the clinical data.
TCGA-AA-3814 f38d49b7-6cad-4460-abd0-3685a3b2d941 02/26/2015 COAD Item may not meet study protocol This case was accepted into TCGA but the pathology report is not consistent with study specific metrics. The BCR will ICD code per the pathology report, which may not match the clinical data.
TCGA-AC-A6IV-10A-01D 7291657b-2a8c-467d-a763-3de577b6401b 10/21/2013 BRCA General DNA analyte UUID: 7291657B-2A8C-467D-A763-3DE577B6401B was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-AC-A6IW-10A-01D fe7f0b20-42ce-48c7-a407-61dc0ea0878e 10/21/2013 BRCA General DNA analyte UUID: FE7F0B20-42CE-48C7-A407-61DC0EA0878E was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-AC-A6NO-10A-01D e277fe01-b1da-4a50-a5f7-9d97706c29fe 10/21/2013 BRCA General DNA analyte UUID: E277FE01-B1DA-4A50-A5F7-9D97706C29FE was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-AJ-A6NU-01A-11D e4a90fb2-9a81-49b7-83d1-01edcb34e9ec 12/03/2013 UCEC General DNA analyte UUID: E4A90FB2-9A81-49B7-83D1-01EDCB34E9EC was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-AJ-A6NU-10A-01D 93f9e956-42f0-4ed6-9d2b-bccfab003a13 12/03/2013 UCEC General DNA analyte UUID: 93F9E956-42F0-4ED6-9D2B-BCCFAB003A13 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-B2-3923-01B-09-BS9 545910de-e796-4723-9018-a5560007a49d 09/27/2013 KIRC General Slide barcode TCGA-B2-3923-01B-09-BS9 differs from parent portion barcode TCGA-B2-3923-01B-10
TCGA-B2-4098 52d73201-9333-422f-a530-5958e866a298 07/17/2015 KIRC Item may not meet study protocol Per the pathology report, this case is 50% clear cell and 50% papillary, which is not acceptable for TCGA.
TCGA-B3-A6W5-10A-01D c429796a-d9f2-4ded-9876-21d6522f0f4f 11/19/2013 KIRP General DNA analyte UUID: C429796A-D9F2-4DED-9876-21D6522F0F4F was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-BB-A6UM-10A-01D a8abdd05-2743-4251-9438-75dbaea02241 12/03/2013 HNSC General DNA analyte UUID: A8ABDD05-2743-4251-9438-75DBAEA02241 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-BB-A6UO-10A-01D 442204cc-52fa-4681-b5ac-a5c7a82b58f9 12/03/2013 HNSC General DNA analyte UUID: 442204CC-52FA-4681-B5AC-A5C7A82B58F9 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 01/30/2015 LIHC General Case originally accepted in the liver study, but is not a hepatocellular. This is a Cholangiocarcinoma and will not be removed or change studies, but will be analyzed in the CHOL study and not in the LIHC study.
TCGA-BH-A0HL-01A-11R f2aa69bd-6402-4c43-b08b-37b762e30edf 05/20/2013 BRCA General Users should discard data fpr this analyte obtained before 5/7/13, and use the latest data available on the Data Portal instead. See http://tcgadcc.com/browse/TCGA-955.
TCGA-BH-A0HL-01A-11R-A10U-07 1ee60bda-48df-4288-90cb-480fbfbc5d50 01/15/2013 BRCA General This is the corrected tcgaBarcode for RNA aliquot UUID: 1ee60bda-48df-4288-90cb-480fbfbc5d50. It replaces the incorrect tcgaBarcode: TCGA-C4-A0F1-01A-11R-A10U-07.
TCGA-BH-A0HL-01A-11R-A10V-13 4819bd80-3cad-4071-9cbd-16eece970f4f 01/15/2013 BRCA General This is the corrected tcgaBarcode for RNA aliquot UUID: 4819bd80-3cad-4071-9cbd-16eece970f4f. It replaces the incorrect tcgaBarcode: TCGA-C4-A0F1-01A-11R-A10V-13. Due to platform incompatibility, data will not be available for this aliquot.
TCGA-BH-A0HM-01A-11R-A10U-07 (none) 01/15/2013 BRCA General This is the corrected barcode for RNA aliquot UUID: 737d212c-43cd-4925-a6a5-568964075a0d. It replaces the incorrect barcode TCGA-C4-A0EZ-01A-21R-A10U-07.
TCGA-BH-A0HM-01A-11R-A10V-13 (none) 01/15/2013 BRCA General This is the corrected barcode for RNA aliquot UUID: a979613c-5f14-47e9-a153-197552c289e6. It replaces the incorrect barcode TCGA-C4-A0EZ-01A-21R-A10V-13. Note, however, the entire case is redacted for unrelated reasons.
TCGA-BH-A0HN-01A-11R 7e941190-5a08-476f-9643-381c45602859 05/20/2013 BRCA General Users should discard data fpr this analyte obtained before 5/7/13, and use the latest data available on the Data Portal instead. See http://tcgadcc.com/browse/TCGA-955.
TCGA-BH-A0HN-01A-11R-A10U-07 6f0cf450-76f1-489d-9890-5093816c0680 01/15/2013 BRCA General This is the corrected tcgaBarcode for RNA aliquot UUID: 6f0cf450-76f1-489d-9890-5093816c0680. It replaces the incorrect tcgaBarcode: TCGA-C4-A0F7-01A-11R-A10U-07.
TCGA-BH-A0HN-01A-11R-A10V-13 2688aaae-389f-4fe9-a198-a95fa9b3ee9b 01/15/2013 BRCA General This is the corrected tcgaBarcode for RNA aliquot UUID: 2688aaae-389f-4fe9-a198-a95fa9b3ee9b. It replaces the incorrect tcgaBarcode: TCGA-C4-A0F7-01A-11R-A10V-13. Due to platform incompatibility, data will not be available for this aliquot.
TCGA-BH-A6R8-10A-01D 89907265-4e6c-4b3c-9f2f-e5ec2ad50d07 10/21/2013 BRCA General DNA analyte UUID: C88EB59E-18A1-4F37-9FC8-9BE86EA9CBDF was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-BH-A6R9-10A-01D d0330be0-6b5b-4f07-a73f-2bf53bce86cd 10/08/2013 BRCA General DNA analyte UUID: D0330BE0-6B5B-4F07-A73F-2BF53BCE86CD was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-BK-A6W3-10A-01D fe1cea79-2ca2-44fb-ab48-7494b1609eb0 12/03/2013 UCEC General DNA analyte UUID: FE1CEA79-2CA2-44FB-AB48-7494B1609EB0 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-BK-A6W4-10A-01D 0fafe583-da6f-4769-bf0f-0f70bc7bec05 12/03/2013 UCEC General DNA analyte UUID: 0FAFE583-DA6F-4769-BF0F-0F70BC7BEC05 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-BP-4334 e5eca191-f585-490d-81e3-9cced1047093 06/16/2014 KIRC Item may not meet study protocol Case possible Kidney Chromophobe
TCGA-BP-4994 82f069c4-7928-4b7b-8a42-114db7de0501 06/16/2014 KIRC Item may not meet study protocol Case possible Kidney Chromophobe
TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad 02/17/2016 BLCA Item may not meet study protocol Per EPC pathology review this case may be a cervical primary and not a bladder primary.
TCGA-C4-A0EZ-01A-21R-A24X-07 8f482c29-37fe-400f-b178-224765a0c037 01/15/2013 BLCA General This is the correct replacement barcode for RNA aliquot UUID: 8f482c29-37fe-400f-b178-224765a0c037, which is a replacement aliquot for UUID: 737d212c-43cd-4925-a6a5-568964075a0d that was incorrectly assigned patient A0EZ, but is actually tcgaBarcode TCGA-BH-A0HM-01A-11R-A10U-07.
TCGA-C4-A0EZ-01A-21R-A24Y-13 8f2b04bd-aa6d-4394-a654-5b8b03152d09 01/15/2013 BLCA General This is the correct replacement barcode for RNA aliquot UUID: 8f2b04bd-aa6d-4394-a654-5b8b03152d09, which is a replacment aliquot for UUID: a979613c-5f14-47e9-a153-197552c289e6 that was incorrectly assigned patient A0HM, but was actually tcgaBarcode TCGA-C4-A0EZ-01A-21R-A10V-13.
TCGA-C4-A0F1-01A-11R fa1fd379-a55f-46b8-a46e-e024611f4704 05/20/2013 BLCA General Users should discard data fpr this analyte obtained before 5/7/13, and use the latest data available on the Data Portal instead. See http://tcgadcc.com/browse/TCGA-955.
TCGA-C4-A0F1-01A-11R-A034-07 791dd985-420e-46a0-a770-ebaf0d2beaf1 01/15/2013 BLCA General This is the corrected tcgaBarcode for RNA aliquot UUID: 791dd985-420e-46a0-a770-ebaf0d2beaf1. It replaces the incorrect tcgaBarcode: TCGA-BH-A0HL-01A-11R-A034-07.
TCGA-C4-A0F1-01A-11R-A25G-13 90df1b76-c43f-473a-a5aa-e60ddf5a9723 01/15/2013 BLCA General This is the correct replacement barcode for RNA aliquot UUID: 90df1b76-c43f-473a-a5aa-e60ddf5a9723, which is a replacement aliquot for UUID: f42e0597-5162-4680-b3f4-bf3edee4d77aa that was incorrectly assigned patient A0F1, but is actually tcgaBarcode TCGA-BH-A0HL-01A-11R-A035-13.
TCGA-C4-A0F7-01A-11R d2e90442-2523-45f0-b900-67fc642807d7 05/20/2013 BLCA General Users should discard data fpr this analyte obtained before 5/7/13, and use the latest data available on the Data Portal instead. See http://tcgadcc.com/browse/TCGA-955.
TCGA-C4-A0F7-01A-11R-A084-07 c0ccb685-0789-4559-9189-05b841173aff 01/15/2013 BLCA General This is the corrected tcgaBarcode for RNA aliquot UUID: c0ccb685-0789-4559-9189-05b841173aff. It replaces the incorrect tcgaBarcode: TCGA-BH-A0HN-01A-11R-A084-07.
TCGA-C4-A0F7-01A-11R-A25G-13 a8894202-2030-4c60-a3d1-803fe9fa3f61 01/15/2013 BLCA General This is the correct replacement barcode for RNA aliquot UUID: a8894202-2030-4c60-a3d1-803fe9fa3f61, which is a replacement aliquot for UUID: c63c6c2c-03ce-44bb-a7b8-98cbf845f8ab that was incorrectly assigned patient A0F7, but is actually tcgaBarcode TCGA-BH-A0HN-01A-11R-A085-13.
TCGA-CG-4472 306f0222-8734-44ca-9a31-86e4e62b0a1b 02/26/2015 STAD Item may not meet study protocol This case was accepted into TCGA but the pathology report is not consistent with study specific metrics. The BCR will ICD code per the pathology report, which may not match the clinical data.
TCGA-CG-4475 cad2adc1-0f41-4651-9c80-ae9961e2dc8d 02/26/2015 STAD Item may not meet study protocol This case was accepted into TCGA but the pathology report is not consistent with study specific metrics. The BCR will ICD code per the pathology report, which may not match the clinical data.
TCGA-CJ-4897-01A-01-BS1 aa540a01-05c2-46ec-a54e-6af8ea740943 09/27/2013 KIRC General Slide barcode TCGA-CJ-4897-01A-01-BS1 differs from parent portion barcode TCGA-CJ-4897-01A-03
TCGA-CN-A6V3-10A-01D 8ac54931-b7f4-4110-bc40-b92c3e69a431 12/03/2013 HNSC General DNA analyte UUID: 8AC54931-B7F4-4110-BC40-B92C3E69A431 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-CN-A6V6-10A-01D 7cd432b2-0633-459a-a1a7-cd21daf761ce 12/03/2013 HNSC General DNA analyte UUID: 7CD432B2-0633-459A-A1A7-CD21DAF761CE was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-CN-A6V7-10A-01D ea7478e9-63d9-435b-b806-95ea4f077523 12/03/2013 HNSC General DNA analyte UUID: EA7478E9-63D9-435B-B806-95EA4F077523 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-CV-7099-01A-02-BS2 1e152adb-e0cb-4962-8004-a9d9310c5e30 09/27/2013 HNSC General Slide barcode TCGA-CV-7099-01A-02-BS2 differs from parent portion barcode TCGA-CV-7099-01A-41
TCGA-DD-A116-11A-12R-A25G-13 f0452a08-12e7-4ea8-af29-3443ce1decbb 01/15/2013 LIHC General This is the correct replacement barcode for RNA aliquot UUID: f0452a08-12e7-4ea8-af29-3443ce1decbb, which is a replacement aliquot for redacted UUID: 6c8c920d-a2bf-4130-86ad-7ce83dc3fd1c that was found to have inconclusive identity (RNA only).
TCGA-DD-A116-11A-12R-A26B-07 f099f7fb-f07a-4529-83dc-e7023c52a999 01/31/2013 LIHC General This is the correct replacement barcode for RNA aliquot UUID: F099F7FB-F07A-4529-83DC-E7023C52A999, which is a replacement aliquot for UUID: baf99a71-0ee9-4f3d-8f35-e350deea64de that was found to have inconclusive identity (RNA only). Note that while this replacement aliquot is derived from the same portion as the DNA, it was created from a different subportion.
TCGA-DD-A3A6 c4c4820b-6f4c-4cdd-b233-4d22f5933fd9 02/05/2015 LIHC Item may not meet study protocol The EPC found that the diagnostic slides were not representative of a hepatocellular case, but is representative of the piece sent for TCGA.
TCGA-DM-A286-01A-21-A17M-20 1d36958d-731f-4fe8-9f75-060e092f310f 07/16/2013 COAD General This tissue portion was included in the last colorectal RPPA shipment while nucleic acids were still being extracted. The analytes ultimately failed molecular QC and this portion of tissue was the only sample from this case that shipped.
TCGA-DU-A6S2-10A-01D d11de879-b970-4b60-b6cc-c5469b9abf39 10/08/2013 LGG General DNA analyte UUID: D11DE879-B970-4B60-B6CC-C5469B9ABF39 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-DU-A6S3-10A-01D 72d579ee-ef62-4cf0-b2c8-d967e6e3b29d 10/08/2013 LGG General DNA analyte UUID: 72D579EE-EF62-4CF0-B2C8-D967E6E3B29D was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-DU-A6S6-10A-01D 35c57159-aa57-43ca-9ee8-1bde4b7f26af 10/08/2013 LGG General DNA analyte UUID: 35C57159-AA57-43CA-9EE8-1BDE4B7F26AF was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-DU-A6S7-10A-01D 7c1ef900-08e4-4c8b-83db-29a1321e93c8 10/08/2013 LGG General DNA analyte UUID: 7C1EF900-08E4-4C8B-83DB-29A1321E93C8 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-DU-A6S8-10A-01D 4a28b218-3746-458f-85a4-65841eddffb9 10/08/2013 LGG General DNA analyte UUID: 4A28B218-3746-458F-85A4-65841EDDFFB9 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-DX-A6YQ-10A-01D 6a58c118-d4ad-4210-8a45-c03b8b0d0df9 10/21/2013 SARC General DNA analyte UUID: 70853205-5DBF-4506-9A0B-6BB41CE8BB22 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-DX-A6YS-10A-01D 7a8d37e7-86d6-4a45-b987-0b5354140358 12/20/2013 SARC General DNA analyte UUID: 7A8D37E7-86D6-4A45-B987-0B5354140358 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-DX-A6YU-10A-01D 1c1e1003-a3e4-40d0-a6c0-b047c7b5a746 10/21/2013 SARC General DNA analyte UUID: 1C1E1003-A3E4-40D0-A6C0-B047C7B5A746 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-DX-AB2L 27a6bd26-4b57-4eee-be02-6b20f5b69e1e 01/12/2015 SARC Item may not meet study protocol TSS informed the BCR that, upon pathologist review of FFPE slide prior to shipment to BCR, this case has no tumor in the TCGA specimen. It is a re-resection specimen. The BCRs pathologists reviewed the TSS frozen top slide, the 3 BCR frozen top slides, and the 25 diagnostic FFPE slides from the initial resection. The initial resection contained myxofibrosarcoma. The frozen top slides of the TCGA tumor do not show any tumor, only reactive tissue.
TCGA-E9-A1NC-01A-21R-A26B-07 50f23d00-f6fd-4b3d-aed2-0705f7ae6a17 01/31/2013 BRCA General This is the correct replacement barcode for RNA aliquot UUID: 50F23D00-F6FD-4B3D-AED2-0705F7AE6A17, which is a replacement aliquot for UUID: 60770e58-3b35-4222-97e9-d92e973f0203 that was found to have inconclusive identity (RNA only). Note that this replacement aliquot is derived from a different portion than the DNA.
TCGA-EJ-7218-10A-01D 172586e8-4b25-4f92-87e0-64cc84380b15 10/08/2013 PRAD General DNA analyte UUID: 172586E8-4B25-4F92-87E0-64CC84380B15 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-EJ-A6RA-10A-01D ca97831a-a906-4b0e-921d-c6b00aaa3c8b 11/19/2013 PRAD General DNA analyte UUID: CA97831A-A906-4B0E-921D-C6B00AAA3C8B was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-EL-A3H2 77200abe-4a09-4a4a-bb45-60d9b96d4998 06/16/2014 THCA General Patient received radiation in early childhood to the thyroid unrelated to treatment of any malignancy
TCGA-EW-A6S9-10A-01D 87a5cafc-582e-4d14-8c3d-dfffce15e63b 10/21/2013 BRCA General DNA analyte UUID: 87A5CAFC-582E-4D14-8C3D-DFFFCE15E63B was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-EW-A6SA-10A-01D 36228261-b2db-4465-869a-672916782b71 10/08/2013 BRCA General DNA analyte UUID: 36228261-B2DB-4465-869A-672916782B71 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-EW-A6SB-10A-01D d0c0f4f4-2ae0-4f76-8faf-a4e35622f14e 10/08/2013 BRCA General DNA analyte UUID: D0C0F4F4-2AE0-4F76-8FAF-A4E35622F14E was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-EW-A6SC-10A-01D 11f3c3e2-2b1d-4409-a43e-42eae8358ce3 10/08/2013 BRCA General DNA analyte UUID: 11F3C3E2-2B1D-4409-A43E-42EAE8358CE3 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-EW-A6SD-10A-01D 024b6e54-dc95-457d-a70d-9db56806159f 10/21/2013 BRCA General DNA analyte UUID: 5493F123-5740-48C9-A531-B351FDA6B081 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-EX-A449 eb0eb159-732e-43ff-a402-7f2d9f67daa8 06/30/2014 CESC General Same patient as FR-A44A...2 different primaries.
TCGA-EY-A72D-10A-01D bb477022-81b7-4680-bfb4-3e17498fdb31 12/03/2013 UCEC General DNA analyte UUID: BB477022-81B7-4680-BFB4-3E17498FDB31 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-F1-A72C-10A-01D 6b5d1b99-7b90-45fb-87d1-e3a9cd5d5317 11/19/2013 STAD General DNA analyte UUID: 6B5D1B99-7B90-45FB-87D1-E3A9CD5D5317 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-FB-A7DR d47e214d-efbc-436d-b928-303d1f5135c4 10/15/2014 PAAD Item may not meet study protocol the PAAD EPC states that this case likely did not arise in the pancreas (ampullary or duodenal)
TCGA-FG-A70Z-10A-01D 6f46bc05-324c-47bd-b3a6-b5684d1a72e7 11/19/2013 LGG General DNA analyte UUID: 6F46BC05-324C-47BD-B3A6-B5684D1A72E7 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-FG-A710-10A-01D 0b92f418-f4d0-47c5-b233-0fefbc9def25 11/19/2013 LGG General DNA analyte UUID: 0B92F418-F4D0-47C5-B233-0FEFBC9DEF25 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-FG-A711-10A-01D c093cb0a-fa73-42bd-9206-a40e52ec81c6 11/19/2013 LGG General DNA analyte UUID: C093CB0A-FA73-42BD-9206-A40E52EC81C6 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-FR-A44A 18e7b73c-4520-42cd-ac9b-23bac1c8ecc6 06/30/2014 SKCM General Same patient as EX-A449...2 different primaries.
TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 01/30/2015 LIHC General Case originally accepted in the liver study, but is not a hepatocellular. This is a Cholangiocarcinoma and will not be removed or change studies, but will be analyzed in the CHOL study and not in the LIHC study.
TCGA-FY-A40K-01B-01-TS1 48283f9e-c813-48a2-aa10-38c051eea783 09/27/2013 THCA General Slide barcode TCGA-FY-A40K-01B-01-TS1 differs from parent sample barcode TCGA-FY-A40K-01A-11
TCGA-G3-A6UC-10A-01D 49a581f3-a79d-4950-988b-099e3860f0ad 10/21/2013 LIHC General DNA analyte UUID: 2D60257D-E8BE-4AAB-8FBB-E4F9064B1CD2 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-HM-A6W2-10A-01D bf58356d-04d2-4124-b870-a44c2b56327f 11/19/2013 CESC General DNA analyte UUID: BF58356D-04D2-4124-B870-A44C2B56327F was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-HT-7483 183dd089-e932-4be2-b252-0e8572e7da4e 03/06/2015 LGG Item may not meet study protocol TSS confirmed that submitted tumor is a recurrence and patient had 2 prior resections before tumor submitted to BCR. Submitted tumor was in same tumor bed as primary. The patient had no prior chemo/radiation treatment.
TCGA-HZ-7289 1521ac6d-31f7-4240-9d54-4f7600e78e16 10/15/2014 PAAD Item may not meet study protocol the PAAD EPC states that this case likely did not arise in the pancreas (ampullary)
TCGA-HZ-8638 5f9a5aba-8db8-45cc-8784-c5058445bd6f 10/15/2014 PAAD Item may not meet study protocol the PAAD EPC states that this case likely did not arise in the pancreas (ampullary)
TCGA-IB-A6UF-10A-01D 87251429-8fd9-476c-bfd6-970fe356f01e 11/19/2013 PAAD General DNA analyte UUID: 87251429-8FD9-476C-BFD6-970FE356F01E was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-IB-A6UG-10A-01D 7c232a9e-0bfc-4ce3-9cb4-1f191d7d2c75 11/19/2013 PAAD General DNA analyte UUID: 7C232A9E-0BFC-4CE3-9CB4-1F191D7D2C75 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-IN-A6RP-01A-21D 44e7d07f-b42f-4015-872b-7a128e7dab60 11/19/2013 STAD General DNA analyte UUID: 44E7D07F-B42F-4015-872B-7A128E7DAB60 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-IN-A6RS-10A-01D 33afd9e3-ed43-4335-8268-d6e3324e4680 01/08/2014 STAD General DNA analyte UUID: 33AFD9E3-ED43-4335-8268-D6E3324E4680 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-IQ-A6SG-10A-01D f764fc5e-a598-43b5-95b1-8c5fb7a5b3e8 12/03/2013 HNSC General DNA analyte UUID: F764FC5E-A598-43B5-95B1-8C5FB7A5B3E8 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-IQ-A6SH-10A-01D 6a19902e-3e13-4ef2-8cd0-a4d529f09ec6 12/03/2013 HNSC General DNA analyte UUID: 6A19902E-3E13-4EF2-8CD0-A4D529F09EC6 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-K1-A6RT-01A-32D 9e1040ef-b104-464f-ae80-730fea5aa973 10/21/2013 SARC General DNA analyte UUID: 9E1040EF-B104-464F-AE80-730FEA5AA973 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-K1-A6RT-10A-01D 40af733e-9424-4d13-bee0-4619a5984c8b 10/21/2013 SARC General DNA analyte UUID: 3C3F705D-416E-4778-8200-E0CF1803794F was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-KC-A7F6-10A-01D f4d29bf4-45fe-4e6a-a438-56a5a74a7650 07/08/2014 PRAD General WGA amplification resulted in a reproducibly abnormal genotype. There is no genotype issue with the stock. The WGA product from this analyte will not be distributed to the GSC.
TCGA-KR-A7K2 fbb398fe-2ba8-4845-8083-6533ecb4a52e 03/04/2015 LIHC General Case originally accepted in the liver study, but is a cholongio-liver mix. This case will not be removed or change studies, but will be analyzed in the CHOL study and not in the LIHC study.
TCGA-MH-A857 919e9d37-3c44-4d15-a246-b7af1c13c1b8 06/30/2014 KIRP Item may not meet study protocol Patient had a synchronous left kidney chromophobe renal cell carcinoma. Therefore, this was in the same organ as the left kidney papillary renal cell carcinoma and may not meet study protocol.
TCGA-NG-A4VW-01A-11 08192fb6-200a-45c9-8d9e-2aec5a70557f 03/14/2014 UCS General Tumor appears to be low purity based on SNP and methylation data.
TCGA-OL-A6VO-10A-01D 44e34ec8-b65b-451c-aea9-89a6537bc689 10/21/2013 BRCA General DNA analyte UUID: 44E34EC8-B65B-451C-AEA9-89A6537BC689 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-OL-A6VR-10A-01D 74f3a478-527e-4d49-9c3f-29f353e1fb6c 10/21/2013 BRCA General DNA analyte UUID: 74F3A478-527E-4D49-9C3F-29F353E1FB6C was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6SW-01A-11D 0a3749e3-1d68-4cd2-899c-6b47fbd57399 12/03/2013 HNSC General DNA analyte UUID: 0A3749E3-1D68-4CD2-899C-6B47FBD57399 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6SX-01A-11D d94f879e-33be-4ad7-851b-8c077146c609 12/03/2013 HNSC General DNA analyte UUID: D94F879E-33BE-4AD7-851B-8C077146C609 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T0-10A-01D eb2ab86e-b29b-4848-ae67-bfd4028f4bd9 12/03/2013 HNSC General DNA analyte UUID: EB2AB86E-B29B-4848-AE67-BFD4028F4BD9 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T2-01A-11D 55419146-d25f-40ac-aac4-853b946aef17 12/03/2013 HNSC General DNA analyte UUID: 55419146-D25F-40AC-AAC4-853B946AEF17 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T2-10A-01D fffb6e9b-dafa-4ea2-a7fd-00ee6ab73300 12/03/2013 HNSC General DNA analyte UUID: FFFB6E9B-DAFA-4EA2-A7FD-00EE6AB73300 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T3-01A-11D 41e7d334-8fe1-43c1-988c-fe09a995f8ef 12/03/2013 HNSC General DNA analyte UUID: 41E7D334-8FE1-43C1-988C-FE09A995F8EF was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T3-10A-01D 72cb7623-0b0e-4469-9d94-10b441847f18 12/03/2013 HNSC General DNA analyte UUID: 72CB7623-0B0E-4469-9D94-10B441847F18 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T4-01A-11D c7d55795-3faf-435b-a116-d8c19dd62e59 12/03/2013 HNSC General DNA analyte UUID: C7D55795-3FAF-435B-A116-D8C19DD62E59 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T4-10A-01D 764fafbe-d595-480b-ba76-c5dd744f5276 12/03/2013 HNSC General DNA analyte UUID: 764FAFBE-D595-480B-BA76-C5DD744F5276 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T5-01A-11D 774509a4-7e68-404a-bdb5-374278b5f3d6 12/03/2013 HNSC General DNA analyte UUID: 774509A4-7E68-404A-BDB5-374278B5F3D6 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T5-10A-01D a6229556-b75b-4f1b-a34c-2b4eeff30921 12/03/2013 HNSC General DNA analyte UUID: A6229556-B75B-4F1B-A34C-2B4EEFF30921 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T6-01A-11D f0df2f48-db9f-477c-8a9d-565869ded1f8 12/03/2013 HNSC General DNA analyte UUID: F0DF2F48-DB9F-477C-8A9D-565869DED1F8 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T6-10A-01D ad8f1789-d7c1-4ace-8bb5-9519c841012e 12/03/2013 HNSC General DNA analyte UUID: AD8F1789-D7C1-4ACE-8BB5-9519C841012E was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T7-01A-11D ee9eaf17-bede-4c7b-8136-aa136f824e48 12/03/2013 HNSC General DNA analyte UUID: EE9EAF17-BEDE-4C7B-8136-AA136F824E48 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T7-10A-01D 93ad9e6b-2a0e-45a9-bad5-9519c7d0af8d 12/03/2013 HNSC General DNA analyte UUID: 93AD9E6B-2A0E-45A9-BAD5-9519C7D0AF8D was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T8-01A-11D d2aeab9c-f88e-4aa8-86ec-ff7fc6502cc7 12/03/2013 HNSC General DNA analyte UUID: D2AEAB9C-F88E-4AA8-86EC-FF7FC6502CC7 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P3-A6T8-10A-01D 3a893c2f-e933-416f-b95c-a92093a29ead 12/03/2013 HNSC General DNA analyte UUID: 3A893C2F-E933-416F-B95C-A92093A29EAD was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-P8-A6RY-10A-01D bd6d293a-9305-4b0d-921a-14092bdda860 01/08/2014 PCPG General DNA analyte UUID: BD6D293A-9305-4B0D-921A-14092BDDA860 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QK-A6V9-01A-11D 21b88c07-4ef5-4137-b5c6-68385592b1b6 12/03/2013 HNSC General DNA analyte UUID: 21B88C07-4EF5-4137-B5C6-68385592B1B6 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A6GZ-05A-11D b0eaed4c-411a-49fa-8241-a310930ae5dc 12/20/2013 PCPG General DNA analyte UUID: B0EAED4C-411A-49FA-8241-A310930AE5DC was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A6ZZ-01A-11D 6e91ae9d-892f-4144-ac36-080760834f1a 12/20/2013 PCPG General DNA analyte UUID: 6E91AE9D-892F-4144-AC36-080760834F1A was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A6ZZ-10A-01D ca3b2578-f9d3-4cd2-9a3c-3b769cb3ec04 01/08/2014 PCPG General DNA analyte UUID: CA3B2578-F9D3-4CD2-9A3C-3B769CB3EC04 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A700-01A-11D 13cee28f-81ce-4071-9e41-43d85db2f64c 12/20/2013 PCPG General DNA analyte UUID: 13CEE28F-81CE-4071-9E41-43D85DB2F64C was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A700-10A-01D 89613383-a402-4571-9e8b-03eeb464445f 01/08/2014 PCPG General DNA analyte UUID: 89613383-A402-4571-9E8B-03EEB464445F was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A703-01A-11D 77f536b5-9d48-474b-8b14-4bc3a12a2a1f 12/20/2013 PCPG General DNA analyte UUID: 77F536B5-9D48-474B-8B14-4BC3A12A2A1F was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A703-10A-01D 1386b987-d78e-42c1-ab3d-0e22f8d45e15 01/08/2014 PCPG General DNA analyte UUID: 1386B987-D78E-42C1-AB3D-0E22F8D45E15 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A705-01A-11D ef9b0a51-10ce-4780-881b-d114e7329c18 12/20/2013 PCPG General DNA analyte UUID: EF9B0A51-10CE-4780-881B-D114E7329C18 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A705-10A-01D 4fe2a9d9-0afa-45a1-bf14-0f8eb45b71c1 01/08/2014 PCPG General DNA analyte UUID: 4FE2A9D9-0AFA-45A1-BF14-0F8EB45B71C1 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A706-01A-11D dcfbad88-1112-4b73-a738-5c3aa7ce51dd 12/20/2013 PCPG General DNA analyte UUID: DCFBAD88-1112-4B73-A738-5C3AA7CE51DD was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A706-10A-01D f8fae78d-719c-4f90-9c53-7185db59dae8 01/08/2014 PCPG General DNA analyte UUID: F8FAE78D-719C-4F90-9C53-7185DB59DAE8 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A707-01A-11D b0a20dae-1bbf-49f0-bd21-78b6e84b2890 12/20/2013 PCPG General DNA analyte UUID: B0A20DAE-1BBF-49F0-BD21-78B6E84B2890 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A707-10A-01D 21c10d67-0a18-4453-8242-dda705689134 01/08/2014 PCPG General DNA analyte UUID: 21C10D67-0A18-4453-8242-DDA705689134 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A708-01A-11D 7a0d951e-b040-4a28-94b2-3b7cbb6af638 12/20/2013 PCPG General DNA analyte UUID: 7A0D951E-B040-4A28-94B2-3B7CBB6AF638 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A708-10A-01D 342e27f7-4955-4971-9b3e-c42386fb1ebe 01/08/2014 PCPG General DNA analyte UUID: 342E27F7-4955-4971-9B3E-C42386FB1EBE was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70A-01A-11D 53d79cde-2071-4da5-a9b9-32df99790d63 12/20/2013 PCPG General DNA analyte UUID: 53D79CDE-2071-4DA5-A9B9-32DF99790D63 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70A-10A-01D e30c6e04-412d-4688-9757-32a68fdafd06 01/08/2014 PCPG General DNA analyte UUID: E30C6E04-412D-4688-9757-32A68FDAFD06 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70C-10A-01D 37b682ad-d4a1-4a66-81f5-143608b40958 01/08/2014 PCPG General DNA analyte UUID: 37B682AD-D4A1-4A66-81F5-143608B40958 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70D-01A-11D c3beb205-0568-4f0b-bbab-37d3b20be344 12/20/2013 PCPG General DNA analyte UUID: C3BEB205-0568-4F0B-BBAB-37D3B20BE344 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70E-01A-11D 437a5db8-0842-4b57-8b4e-bfa23d4a7f10 12/20/2013 PCPG General DNA analyte UUID: 437A5DB8-0842-4B57-8B4E-BFA23D4A7F10 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70E-10A-01D 456ab55a-18ec-45d6-a788-fbb06f35beca 01/08/2014 PCPG General DNA analyte UUID: 456AB55A-18EC-45D6-A788-FBB06F35BECA was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70G-10A-01D 081944ea-c3be-4185-8457-3b77776bcd31 01/08/2014 PCPG General DNA analyte UUID: 081944EA-C3BE-4185-8457-3B77776BCD31 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70H-10A-01D 67c033c0-9fe8-4004-967e-c605e1890f4d 01/08/2014 PCPG General DNA analyte UUID: 67C033C0-9FE8-4004-967E-C605E1890F4D was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70I-01A-11D 1fa9cbd1-a06f-4c8a-b57a-02ce5540c928 12/20/2013 PCPG General DNA analyte UUID: 1FA9CBD1-A06F-4C8A-B57A-02CE5540C928 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70I-10A-01D c08441d8-69e2-4fc1-8e32-a9caae37ae44 01/08/2014 PCPG General DNA analyte UUID: C08441D8-69E2-4FC1-8E32-A9CAAE37AE44 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70J-01A-11D d56cda01-e002-4bf1-bdfe-cfbbacabdd02 12/20/2013 PCPG General DNA analyte UUID: D56CDA01-E002-4BF1-BDFE-CFBBACABDD02 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70J-10A-01D 8b92450d-3186-44be-aa0c-42d6bdbd6e22 01/08/2014 PCPG General DNA analyte UUID: 8B92450D-3186-44BE-AA0C-42D6BDBD6E22 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70M-01A-11D 2ad1e388-3756-4694-8355-12c448c5d227 12/20/2013 PCPG General DNA analyte UUID: 2AD1E388-3756-4694-8355-12C448C5D227 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70O-01A-11D 58c95132-b946-478b-a5f8-9d76e3f5efde 12/20/2013 PCPG General DNA analyte UUID: 58C95132-B946-478B-A5F8-9D76E3F5EFDE was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70R-01A-11D 1e46c444-81c0-4372-b88e-369d1620bc36 12/20/2013 PCPG General DNA analyte UUID: 1E46C444-81C0-4372-B88E-369D1620BC36 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70R-10A-01D 22500689-d20d-436c-b038-bd001c41e415 01/08/2014 PCPG General DNA analyte UUID: 22500689-D20D-436C-B038-BD001C41E415 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70T-01A-11D 1cf4aba7-fac3-4311-8e1b-3e29ea735752 12/20/2013 PCPG General DNA analyte UUID: 1CF4ABA7-FAC3-4311-8E1B-3E29EA735752 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70T-10A-01D 7121b1c6-3124-4355-a540-67a16d2881cb 01/08/2014 PCPG General DNA analyte UUID: 7121B1C6-3124-4355-A540-67A16D2881CB was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70U-01A-11D 5dc425a0-4350-4db6-bd3f-8cf751979874 12/20/2013 PCPG General DNA analyte UUID: 5DC425A0-4350-4DB6-BD3F-8CF751979874 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70U-10A-01D 795a1130-96c8-4705-8fec-5fc051ea34a3 01/08/2014 PCPG General DNA analyte UUID: 795A1130-96C8-4705-8FEC-5FC051EA34A3 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70V-01A-11D df2c3513-31eb-4f2d-8196-d1cd7cc5f4ea 12/20/2013 PCPG General DNA analyte UUID: DF2C3513-31EB-4F2D-8196-D1CD7CC5F4EA was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70V-10A-01D 80b423f0-bf92-42ce-870d-77b744373526 01/08/2014 PCPG General DNA analyte UUID: 80B423F0-BF92-42CE-870D-77B744373526 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70X-01A-11D c7761f1e-3ba9-4035-8a82-c25774d4b11c 12/20/2013 PCPG General DNA analyte UUID: C7761F1E-3BA9-4035-8A82-C25774D4B11C was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-QR-A70X-10A-01D fa61e3bb-dc97-437c-bb1d-e1f5db139dc1 01/08/2014 PCPG General DNA analyte UUID: FA61E3BB-DC97-437C-BB1D-E1F5DB139DC1 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-R8-A6MO-10C-01D 624ee58b-68f5-42a3-ac56-c278d3dd6c6f 11/19/2013 LGG General DNA analyte UUID: 624EE58B-68F5-42A3-AC56-C278D3DD6C6F was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-RS-A6TO-10A-01D 46bba007-3f7f-4b77-b33d-1151900dfb62 12/03/2013 HNSC General DNA analyte UUID: 46BBA007-3F7F-4B77-B33D-1151900DFB62 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-RS-A6TP-10A-01D 8304f61f-c217-4b9f-ba64-6486da54e6c8 12/03/2013 HNSC General DNA analyte UUID: 8304F61F-C217-4B9F-BA64-6486DA54E6C8 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6TS-10A-01D 971670c8-610e-4731-82fd-1c311c14e769 11/19/2013 LGG General DNA analyte UUID: 971670C8-610E-4731-82FD-1C311C14E769 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6TU-10A-01D 3e0c51e7-dfb8-4ba3-8534-402890e134bb 10/08/2013 LGG General DNA analyte UUID: 3E0C51E7-DFB8-4BA3-8534-402890E134BB was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6TW-10A-01D 152d9334-cebc-49b6-8807-965fadcc5565 10/08/2013 LGG General DNA analyte UUID: 152D9334-CEBC-49B6-8807-965FADCC5565 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6TX-10A-01D ec5cfeeb-fb31-4e85-b698-3ae8957b8f9d 10/08/2013 LGG General DNA analyte UUID: EC5CFEEB-FB31-4E85-B698-3AE8957B8F9D was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6TY-10A-01D 6378c82e-2382-483b-a097-bafd1da676f2 10/08/2013 LGG General DNA analyte UUID: 6378C82E-2382-483B-A097-BAFD1DA676F2 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6TZ-10A-01D 966bc35e-1139-4801-a3d9-54dc9b0a13e8 10/08/2013 LGG General DNA analyte UUID: 966BC35E-1139-4801-A3D9-54DC9B0A13E8 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6U0-10A-01D 3a02af22-6d16-4e92-9b8c-46249b3b4659 10/08/2013 LGG General DNA analyte UUID: 3A02AF22-6D16-4E92-9B8C-46249B3B4659 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6U1-10A-01D 4e9a39dc-3b63-4fd5-bfb9-49abbc0fb396 11/19/2013 LGG General DNA analyte UUID: 4E9A39DC-3B63-4FD5-BFB9-49ABBC0FB396 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6U2-10A-01D 2c600422-2be3-4503-b6a1-afc22d652695 11/19/2013 LGG General DNA analyte UUID: 2C600422-2BE3-4503-B6A1-AFC22D652695 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6U5-10A-01D 4c45ca39-62dc-4b63-9614-ff20c1a0c0f6 11/19/2013 LGG General DNA analyte UUID: 4C45CA39-62DC-4B63-9614-FF20C1A0C0F6 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6U6-10A-01D 0013b95d-6e52-4bd0-8dd7-a72f30838bde 11/19/2013 LGG General DNA analyte UUID: 0013B95D-6E52-4BD0-8DD7-A72F30838BDE was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6U8-01A-21D 82ef45cd-29ab-4e9f-a5c7-85d2868ad109 11/19/2013 LGG General DNA analyte UUID: 82EF45CD-29AB-4E9F-A5C7-85D2868AD109 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6U8-10A-01D 7f22063a-48f1-4778-bf8a-e7d7d072f3fc 11/19/2013 LGG General DNA analyte UUID: 7F22063A-48F1-4778-BF8A-E7D7D072F3FC was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6UA-10A-01D 86d27624-192f-47a4-aa8a-222f1a5e0c3c 11/19/2013 LGG General DNA analyte UUID: 86D27624-192F-47A4-AA8A-222F1A5E0C3C was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6UB-10A-01D e33b93af-4055-44fd-873c-206cd3382541 11/19/2013 LGG General DNA analyte UUID: E33B93AF-4055-44FD-873C-206CD3382541 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6WD-10A-01D bcfdafc7-ec31-4e3b-a9f6-84f936daa3e5 11/19/2013 LGG General DNA analyte UUID: BCFDAFC7-EC31-4E3B-A9F6-84F936DAA3E5 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6WE-10A-01D d062e21e-eaca-4897-a072-6a39994f9cf1 11/19/2013 LGG General DNA analyte UUID: D062E21E-EACA-4897-A072-6A39994F9CF1 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6WG-01A-11D edb2be44-e108-4375-9d67-f5e7f0461651 11/19/2013 LGG General DNA analyte UUID: EDB2BE44-E108-4375-9D67-F5E7F0461651 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6WG-10A-01D 9099ad14-a8cf-4c0c-96dd-39d989c90019 11/19/2013 LGG General DNA analyte UUID: 9099AD14-A8CF-4C0C-96DD-39D989C90019 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6WH-10A-01D 0a76195c-7c1b-4789-bc3d-411f9cd25baa 11/19/2013 LGG General DNA analyte UUID: 0A76195C-7C1B-4789-BC3D-411F9CD25BAA was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6WI-10A-01D 056cb29f-b552-47f9-9917-1c2af84a4c80 11/19/2013 LGG General DNA analyte UUID: 056CB29F-B552-47F9-9917-1C2AF84A4C80 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6WL-10A-01D 2ca08806-7058-4262-98a0-1a9b88662c7a 11/19/2013 LGG General DNA analyte UUID: 2CA08806-7058-4262-98A0-1A9B88662C7A was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6WM-10A-01D a4e6c10b-639b-42b2-94ba-ba042c3d814f 11/19/2013 LGG General DNA analyte UUID: A4E6C10B-639B-42B2-94BA-BA042C3D814F was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6WN-10A-01D d7c41735-ec6b-4d8d-8e24-e0078b3dd5d0 11/19/2013 LGG General DNA analyte UUID: D7C41735-EC6B-4D8D-8E24-E0078B3DD5D0 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6WO-10A-01D f13596af-ac01-47db-b06d-422eaae4f714 12/03/2013 LGG General DNA analyte UUID: F13596AF-AC01-47DB-B06D-422EAAE4F714 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6WP-10A-01D 4ad5fa31-73d9-446e-bca0-75b261964e9b 12/03/2013 LGG General DNA analyte UUID: 4AD5FA31-73D9-446E-BCA0-75B261964E9B was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-S9-A6WQ-10A-01D 40385046-32ff-47dc-ad2c-6bca97e6fd96 12/03/2013 LGG General DNA analyte UUID: 40385046-32FF-47DC-AD2C-6BCA97E6FD96 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SG-A6Z4-10A-01D 0f29710e-62a6-4383-9be8-e2407a214149 10/21/2013 SARC General DNA analyte UUID: 38888A35-E274-438D-9A1A-235ABAFD037C was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SI-A71O-10A-01D fa3ff59b-4476-4713-82b0-1db1d2659033 10/21/2013 SARC General DNA analyte UUID: 73B65A5D-C8AE-4832-825D-85457183FFB3 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SI-A71P-10A-01D 8e6ee3b0-fad1-4b41-9e0c-808066c4921d 10/21/2013 SARC General DNA analyte UUID: 8E6EE3B0-FAD1-4B41-9E0C-808066C4921D was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SI-A71Q-10A-01D 4407e49b-6eb6-482a-b936-2bf04c0d283d 10/21/2013 SARC General DNA analyte UUID: A4363127-A73D-460A-AF41-5E12648923D7 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SP-A6QD-10A-01D bca2d18e-d680-475e-a2f8-9d5bbc4fbc5c 01/08/2014 PCPG General DNA analyte UUID: BCA2D18E-D680-475E-A2F8-9D5BBC4FBC5C was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SP-A6QG-10A-01D 00e60d68-85c2-4851-9897-2d24296dff34 01/08/2014 PCPG General DNA analyte UUID: 00E60D68-85C2-4851-9897-2D24296DFF34 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SP-A6QH-01A-21D 872474bd-2769-4a4b-bd92-ddfb7837fa10 12/20/2013 PCPG General DNA analyte UUID: 872474BD-2769-4A4B-BD92-DDFB7837FA10 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SP-A6QI-10A-01D 55fd038b-93e2-4487-a5b1-51e71e871075 01/08/2014 PCPG General DNA analyte UUID: 55FD038B-93E2-4487-A5B1-51E71E871075 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SR-A6MR-01A-11D 752ea57e-83e5-41e0-9ea2-424b9d14df14 12/20/2013 PCPG General DNA analyte UUID: 752EA57E-83E5-41E0-9EA2-424B9D14DF14 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SR-A6MU-01A-11D ab828e83-a88e-47ed-84ed-bdd6c39bbf42 12/20/2013 PCPG General DNA analyte UUID: AB828E83-A88E-47ED-84ED-BDD6C39BBF42 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SR-A6MV-01A-11D 7b097f52-8ff2-4893-9394-42e5fcf00291 12/20/2013 PCPG General DNA analyte UUID: 7B097F52-8FF2-4893-9394-42E5FCF00291 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SX-A71R-10A-01D 6b384651-81d9-4018-9a0c-1dc9515fa340 11/19/2013 KIRP General DNA analyte UUID: 6B384651-81D9-4018-9A0C-1DC9515FA340 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SX-A71S-01A-11D 784166c8-aab7-467e-999c-e63963afecdf 11/19/2013 KIRP General DNA analyte UUID: 784166C8-AAB7-467E-999C-E63963AFECDF was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SX-A71S-10A-01D 4c566901-3b8d-4017-9f89-b3bf151c9294 11/19/2013 KIRP General DNA analyte UUID: 4C566901-3B8D-4017-9F89-B3BF151C9294 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SX-A71U-10A-01D 1b13f47b-09db-409e-ba3e-47a70c9fd3e0 11/19/2013 KIRP General DNA analyte UUID: 1B13F47B-09DB-409E-BA3E-47A70C9FD3E0 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SX-A71V-01A-11D 22763f78-071e-4680-91c4-735978ad8365 11/19/2013 KIRP General DNA analyte UUID: 22763F78-071E-4680-91C4-735978AD8365 was involved in an extraction protocol deviation wherein isopropanol precipitation was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SX-A71V-10A-01D 5c795dc4-bc2a-4fe4-9ecf-05c980b4d7ca 11/19/2013 KIRP General DNA analyte UUID: 5C795DC4-BC2A-4FE4-9ECF-05C980B4D7CA was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SX-A71W-01A-12D 15e80fc7-c58b-4009-aa2d-b3c1273bd5c5 12/20/2013 KIRC General DNA analyte UUID: 15E80FC7-C58B-4009-AA2D-B3C1273BD5C5 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-SX-A71W-10A-01D 4cb23b95-2126-425e-b174-5c5da620069e 12/20/2013 KIRC General DNA analyte UUID: 4CB23B95-2126-425E-B174-5C5DA620069E was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-TT-A6YJ-01A-11D 34049748-3dd8-469e-8b08-0a097051a044 12/20/2013 PCPG General DNA analyte UUID: 34049748-3DD8-469E-8B08-0A097051A044 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-TT-A6YK-01A-11D 30267ac9-1aa7-4455-8414-00aa5fde7f82 12/20/2013 PCPG General DNA analyte UUID: 30267AC9-1AA7-4455-8414-00AA5FDE7F82 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-TT-A6YK-10A-01D e566c752-4042-4d54-8bf2-fcf9f97aecbb 01/08/2014 PCPG General DNA analyte UUID: E566C752-4042-4D54-8BF2-FCF9F97AECBB was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-TT-A6YN-10A-01D 8def814b-98ec-4ff7-a4cc-7e33bb5a37f1 01/08/2014 PCPG General DNA analyte UUID: 8DEF814B-98EC-4FF7-A4CC-7E33BB5A37F1 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-TT-A6YO-01A-11D 24bd1bd7-3a8b-47b8-8f5a-54820a1d6cd2 12/20/2013 PCPG General DNA analyte UUID: 24BD1BD7-3A8B-47B8-8F5A-54820A1D6CD2 was involved in an extraction protocol deviation wherein an isopropanol precipitation step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-TT-A6YO-10A-01D 14c2d366-ba0e-4f66-9411-3348cd6f1f54 01/08/2014 PCPG General DNA analyte UUID: 14C2D366-BA0E-4F66-9411-3348CD6F1F54 was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-TT-A6YP-10A-01D b4de462a-1728-4bc6-b670-c2836b95796d 01/08/2014 PCPG General DNA analyte UUID: B4DE462A-1728-4BC6-B670-C2836B95796D was involved in an extraction protocol deviation wherein an additional column purification step was used as a means of buffer exchange on the column-eluted analyte.
TCGA-UB-A7MA 10179efc-a091-4119-8ec2-30db6269d674 03/04/2015 LIHC General Case originally accepted in the liver study, but is a cholongio-liver mix. This case will not be removed or change studies, but will be analyzed in the CHOL study and not in the LIHC study.
TCGA-UD-AABY a20fb646-2a9e-42ac-a2cc-ff3d6a0625fa 10/03/2014 MESO Item may not meet study protocol Patient was diagnosed 2 years prior to cancer procurement with no surgery until TCGA tumor was resected, therefore this may be considered a progression. Patient was treated with pleurodesis more than 90 days prior to cancer procurement which is acceptable.
TCGA-V5-AASX-11A 1c466f84-31c4-4a5f-a92b-0137f8f7dcf8 01/19/2015 ESCA General Normal Tissue shipped is a Barrett's mucosa with mild dysplasia, negative for adenocarcinoma
TCGA-ZF-AA4N c692e696-37fe-4fc1-90eb-8e34a91a98fc 11/18/2014 BLCA Item may not meet study protocol the reviewing pathologist could not determine whether the case was urothelial or squamous cell