Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
A2ML1	144568	genome.wustl.edu	37	12	8994108	8994108	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	8994108	8994108	G	C	SNP	A2ML1	NM_144670	human	genbank	57_37b	+1	validated	missense	c.1224	p.W408C	0.995	NULL	HMMPfam_A2M_N,HMMPfam_A2M_N_2,HMMPfam_A2M,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN,HMMPfam_A2M_comp,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_recep	-	no_errors	
ABI3	51225	genome.wustl.edu	37	17	47297295	47297295	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	47297295	47297295	G	A	SNP	ABI3	NM_016428	human	genbank	57_37b	+1	reviewed	silent	c.624	p.A208	0.466	NULL	HMMPfam_Abi_HHR,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors	
ADAMTS17	170691	genome.wustl.edu	37	15	100516261	100516261	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	100516261	100516261	G	A	SNP	ADAMTS17	NM_139057	human	genbank	57_37b	-1	reviewed	missense	c.3116	p.S1039F	1.000	NULL	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,HMMSmart_SM00608,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ADAM_spacer1,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_PLAC"	-	no_errors	
ADCY1	107	genome.wustl.edu	37	7	45662233	45662233	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	45662233	45662233	T	G	SNP	ADCY1	NM_021116	human	genbank	57_37b	+1	reviewed	missense	c.911	p.I304S	1.000	HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_Guanylate_cyc	HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors	
ADPGK	83440	genome.wustl.edu	37	15	73044527	73044527	+	RNA	SNP	T	T	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	73044527	73044527	T	C	SNP	ADPGK	NR_023318	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.985	-	-	-	no_errors	
ALKBH8	91801	genome.wustl.edu	37	11	107424599	107424602	+	Frame_Shift_Del	DEL	CAAT	CAAT	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	CAAT	CAAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	107424599	107424602	CAAT	-	DEL	ALKBH8	NM_138775	human	genbank	57_37b	-1	validated	frame_shift_del	c.473_470	p.D157fs	1.000:1.000:0.998:1.000	NULL	HMMPfam_DUF1891,PatternScan_RIBOSOMAL_L23,HMMPfam_2OG-FeII_Oxy,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_11	(deletion:cds_exon[107424573,107424704])	no_errors	
AMZ1	155185	genome.wustl.edu	37	7	2740317	2740317	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	2740317	2740317	C	T	SNP	AMZ1	NM_133463	human	genbank	57_37b	+1	provisional	nonsense	c.232	p.Q78*	0.966	NULL	"superfamily_Metalloproteases (""zincins"") catalytic domain,PatternScan_ZINC_PROTEASE"	-	no_errors	
ANK1	286	genome.wustl.edu	37	8	41580687	41580687	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	41580687	41580687	C	G	SNP	ANK1	NM_001142446	human	genbank	57_37b	-1	reviewed	missense	c.964	p.E322Q	1.000	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,HMMPfam_ZU5,HMMSmart_ZU5,HMMSmart_DEATH,superfamily_DEATH_like,HMMPfam_Death	-	no_errors	
ANKRD31	256006	genome.wustl.edu	37	5	74400296	74400296	+	Silent	SNP	C	A	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	74400296	74400296	C	A	SNP	ANKRD31	ENST00000274361	human	ensembl	57_37b	-1	known	silent	c.4917	p.G1639	0.000	NULL	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank	-	no_errors	
AR	367	genome.wustl.edu	37	X	66942814	66942814	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	66942814	66942814	C	A	SNP	AR	NM_000044	human	genbank	57_37b	+1	reviewed	missense	c.2595	p.D865E	1.000	superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	HMMPfam_Androgen_recep,HMMSmart_SM00399,HMMPfam_zf-C4,superfamily_Glucocorticoid receptor-like (DNA-binding domain),PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors	
ARHGAP25	9938	genome.wustl.edu	37	2	69040480	69040480	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	69040480	69040480	C	A	SNP	ARHGAP25	NM_001007231	human	genbank	57_37b	+1	validated	missense	c.733	p.P245T	1.000	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
ARL8B	55207	genome.wustl.edu	37	3	5164036	5164036	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	5164036	5164036	C	G	SNP	ARL8B	ENST00000438743	human	ensembl	57_37b	+1	known	missense	c.58	p.R20G	0.030	NULL	HMMSmart_ARF,HMMPfam_Arf,superfamily_SSF52540	-	no_errors	
ARSB	411	genome.wustl.edu	37	5	78181641	78181641	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	78181641	78181641	C	T	SNP	ARSB	NM_000046	human	genbank	57_37b	-1	reviewed	missense	c.908	p.G303E	1.000	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core	HMMPfam_Sulfatase,superfamily_Alkaline_phosphatase_core,PatternScan_SULFATASE_1,PatternScan_SULFATASE_2	-	no_errors	
ARSE	415	genome.wustl.edu	37	X	2861123	2861123	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	2861123	2861123	C	G	SNP	ARSE	NM_000047	human	genbank	57_37b	-1	reviewed	missense	c.1109	p.W370S	1.000	superfamily_Alkaline_phosphatase_core,HMMPfam_Sulfatase	superfamily_Alkaline_phosphatase_core,HMMPfam_Sulfatase,PatternScan_SULFATASE_1,PatternScan_SULFATASE_2	-	no_errors	
ASS1	445	genome.wustl.edu	37	9	133355834	133355834	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	133355834	133355834	G	C	SNP	ASS1	NM_000050	human	genbank	57_37b	+1	reviewed	missense	c.836	p.R279P	1.000	HMMPfam_Arginosuc_synth,superfamily_Argininosuccinate synthetase C-terminal domain	superfamily_Adenine nucleotide alpha hydrolases-like,HMMPfam_Arginosuc_synth,PatternScan_ARGININOSUCCIN_SYN_1,PatternScan_ARGININOSUCCIN_SYN_2,superfamily_Argininosuccinate synthetase C-terminal domain	-	no_errors	
ASXL3	80816	genome.wustl.edu	37	18	31324097	31324097	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	31324097	31324097	C	A	SNP	ASXL3	NM_030632	human	genbank	57_37b	+1	provisional	missense	c.4285	p.P1429T	0.828	NULL	NULL	-	no_errors	
ATG4C	84938	genome.wustl.edu	37	1	63300523	63300523	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	63300523	63300523	G	A	SNP	ATG4C	NM_032852	human	genbank	57_37b	+1	reviewed	silent	c.1089	p.E363	1.000	HMMPfam_Peptidase_C54	HMMPfam_Peptidase_C54	-	no_errors	
ATL3	25923	genome.wustl.edu	37	11	63438856	63438856	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	63438856	63438856	A	C	SNP	ATL3	ENST00000332645	human	ensembl	57_37b	-1	known	silent	c.108	p.R36	0.022	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GBP,superfamily_Interferon-induced guanylate-binding protein 1 (GBP1) C-terminal domain	-	no_errors	
ATP2B3	492	genome.wustl.edu	37	X	152830499	152830499	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	152830499	152830499	G	C	SNP	ATP2B3	NM_001001344	human	genbank	57_37b	+1	reviewed	missense	c.3280	p.E1094Q	1.000	NULL	HMMPfam_Cation_ATPase_N,superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,HMMPfam_Hydrolase,superfamily_HAD-like,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,HMMPfam_Cation_ATPase_C	-	no_errors	
BBX	56987	genome.wustl.edu	37	3	107466845	107466845	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	107466845	107466845	A	G	SNP	BBX	NM_001142568	human	genbank	57_37b	+1	validated	missense	c.784	p.T262A	0.729	HMMPfam_DUF2028	superfamily_HMG-box,HMMSmart_SM00398,HMMPfam_HMG_box,HMMPfam_DUF2028	-	no_errors	
BEST2	54831	genome.wustl.edu	37	19	12867020	12867020	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	12867020	12867020	G	C	SNP	BEST2	NM_017682	human	genbank	57_37b	+1	reviewed	missense	c.1014	p.W338C	1.000	HMMPfam_Bestrophin	HMMPfam_Bestrophin	-	no_errors	
BRCA1	672	genome.wustl.edu	37	17	41276033	41276033	+	Splice_Site	SNP	C	T	T	rs80358010	byCluster	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	41276033	41276033	C	T	SNP	BRCA1	NM_007294	human	genbank	57_37b	-1	reviewed	splice_site	c.80+1	e1+1	1.000	-	-	-		
BRIP1	83990	genome.wustl.edu	37	17	59793371	59793371	+	Silent	SNP	T	G	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	59793371	59793371	T	G	SNP	BRIP1	NM_032043	human	genbank	57_37b	-1	reviewed	silent	c.2433	p.L811	1.000	HMMSmart_SM00491	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00488,HMMSmart_SM00487,HMMPfam_DEAD_2,HMMSmart_SM00491	-	no_errors	
BTBD9	114781	genome.wustl.edu	37	6	38142776	38142776	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	38142776	38142776	G	T	SNP	BTBD9	NM_001099272	human	genbank	57_37b	-1	reviewed	missense	c.1824	p.N608K	0.875	NULL	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,HMMPfam_BACK,superfamily_Gal_bind_like,HMMPfam_F5_F8_type_C	-	no_errors	
BTNL9	153579	genome.wustl.edu	37	5	180475204	180475204	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	180475204	180475204	C	A	SNP	BTNL9	NM_152547	human	genbank	57_37b	+1	validated	silent	c.387	p.G129	0.004	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00406	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00406,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors	
C11orf41	25758	genome.wustl.edu	37	11	33667568	33667568	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	33667568	33667568	A	T	SNP	C11orf41	NM_012194	human	genbank	57_37b	+1	validated	missense	c.4873	p.S1625C	1.000	NULL	NULL	-	no_errors	
C15orf38	348110	genome.wustl.edu	37	15	90446465	90446465	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	90446465	90446465	C	T	SNP	C15orf38	NM_182616	human	genbank	57_37b	-1	validated	missense	c.655	p.A219T	1.000	HMMPfam_UPF0552	HMMPfam_UPF0552	-	no_errors	
C16orf62	57020	genome.wustl.edu	37	16	19566935	19566935	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	19566935	19566935	T	G	SNP	C16orf62	ENST00000438132	human	ensembl	57_37b	+1	known	missense	c.151	p.C51G	0.000	NULL	NULL	-	no_errors	
C16orf62	57020	genome.wustl.edu	37	16	19651363	19651363	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	19651363	19651363	G	T	SNP	C16orf62	NM_020314	human	genbank	57_37b	+1	predicted	missense	c.1725	p.M575I	1.000	NULL	NULL	-	no_errors	
C17orf66	256957	genome.wustl.edu	37	17	34182707	34182707	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	34182707	34182707	G	C	SNP	C17orf66	NM_152781	human	genbank	57_37b	-1	validated	missense	c.1326	p.D442E	1.000	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors	
C17orf71	55181	genome.wustl.edu	37	17	57288043	57288043	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	57288043	57288043	C	A	SNP	C17orf71	NM_018149	human	genbank	57_37b	+1	validated	missense	c.631	p.L211I	1.000	HMMPfam_DUF2146	HMMPfam_DUF2146	-	no_errors	
C1orf58	148362	genome.wustl.edu	37	1	222903439	222903451	+	Frame_Shift_Del	DEL	TTCAGGACATCTG	TTCAGGACATCTG	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	TTCAGGACATCTG	TTCAGGACATCTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	222903439	222903451	TTCAGGACATCTG	-	DEL	C1orf58	NM_144695	human	genbank	57_37b	+1	validated	frame_shift_del	c.909_921	p.G305fs	0.614:0.998:0.999:0.008:0.998:0.999:0.991:1.000:1.000:1.000:1.000:1.000:0.995	HMMPfam_BRO1	HMMPfam_BRO1	(deletion:cds_exon[222903369,222903519])	no_errors	
C1orf58	148362	genome.wustl.edu	37	1	222903458	222903458	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	222903458	222903458	A	-	DEL	C1orf58	NM_144695	human	genbank	57_37b	+1	validated	frame_shift_del	c.928	p.R310fs	0.774	HMMPfam_BRO1	HMMPfam_BRO1	(deletion:cds_exon[222903369,222903519])	no_errors	
C20orf43	51507	genome.wustl.edu	37	20	55093275	55093275	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	55093275	55093275	A	T	SNP	C20orf43	NM_016407	human	genbank	57_37b	+1	validated	missense	c.875	p.K292M	1.000	NULL	HMMPfam_DUF602	-	no_errors	
C5orf33	133686	genome.wustl.edu	37	5	36211996	36211996	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	36211996	36211996	C	T	SNP	C5orf33	NM_001085411	human	genbank	57_37b	-1	validated	silent	c.810	p.L270	1.000	superfamily_NAD kinase (Pfam 01513)	superfamily_NAD kinase (Pfam 01513),HMMPfam_NAD_kinase	-	no_errors	
CACNA1F	778	genome.wustl.edu	37	X	49066136	49066136	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49066136	49066136	C	A	SNP	CACNA1F	NM_005183	human	genbank	57_37b	-1	reviewed	missense	c.4807	p.G1603W	1.000	HMMPfam_Ca_chan_IQ	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ	-	no_errors	
CACNA1F	778	genome.wustl.edu	37	X	49089736	49089736	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49089736	49089736	G	A	SNP	CACNA1F	ENST00000376251	human	ensembl	57_37b	-1	known	silent	c.36	p.I12	0.001	NULL	HMMPfam_Ion_trans,HMMPfam_Ca_chan_IQ,superfamily_SSF81324	-	no_errors	
CACNA1I	8911	genome.wustl.edu	37	22	40075213	40075213	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	40075213	40075213	C	T	SNP	CACNA1I	NM_021096	human	genbank	57_37b	+1	reviewed	silent	c.5157	p.F1719	0.992	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors	
CACNA2D1	781	genome.wustl.edu	37	7	81643739	81643739	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	81643739	81643739	C	A	SNP	CACNA2D1	NM_000722	human	genbank	57_37b	-1	reviewed	missense	c.1200	p.Q400H	1.000	superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA	HMMPfam_VWA_N,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA,HMMPfam_Cache_1,HMMPfam_VGCC_alpha2	-	no_errors	
CACNG3	10368	genome.wustl.edu	37	16	24366196	24366196	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	24366196	24366196	C	T	SNP	CACNG3	NM_006539	human	genbank	57_37b	+1	reviewed	missense	c.338	p.T113M	0.994	HMMPfam_PMP22_Claudin	HMMPfam_PMP22_Claudin	-	no_errors	
CBX4	8535	genome.wustl.edu	37	17	77809031	77809031	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	77809031	77809031	C	T	SNP	CBX4	NM_003655	human	genbank	57_37b	-1	validated	missense	c.410	p.R137Q	0.556	NULL	superfamily_Chromodomain-like,HMMSmart_CHROMO,HMMPfam_Chromo,PatternScan_CHROMO_1	-	no_errors	
CCDC104	112942	genome.wustl.edu	37	2	55771103	55771103	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	55771103	55771103	A	G	SNP	CCDC104	NM_080667	human	genbank	57_37b	+1	validated	missense	c.670	p.I224V	0.074	NULL	NULL	-	no_errors	
CCDC68	80323	genome.wustl.edu	37	18	52609945	52609945	+	Silent	SNP	C	C	T	rs61743412	byCluster;byFrequency;by1000genomes	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	52609945	52609945	C	T	SNP	CCDC68	NM_001143829	human	genbank	57_37b	-1	validated	silent	c.78	p.T26	0.000	NULL	NULL	-		
CD19	930	genome.wustl.edu	37	16	28944399	28944399	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	28944399	28944399	C	G	SNP	CD19	NM_001770	human	genbank	57_37b	+1	reviewed	missense	c.523	p.P175A	0.000	superfamily_SSF48726	superfamily_SSF48726,HMMSmart_IG	-	no_errors	
CDH24	64403	genome.wustl.edu	37	14	23523514	23523514	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23523514	23523514	C	G	SNP	CDH24	NM_022478	human	genbank	57_37b	-1	validated	missense	c.808	p.E270Q	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
CHD6	84181	genome.wustl.edu	37	20	40033370	40033370	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	40033370	40033370	G	C	SNP	CHD6	NM_032221	human	genbank	57_37b	-1	reviewed	missense	c.8011	p.P2671A	1.000	NULL	superfamily_Chromo domain-like,HMMSmart_SM00298,HMMPfam_Chromo,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_BRK,HMMSmart_SM00592	-	no_errors	
CHN1	1123	genome.wustl.edu	37	2	175689201	175689201	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	175689201	175689201	A	T	SNP	CHN1	NM_001822	human	genbank	57_37b	-1	reviewed	missense	c.673	p.F225I	1.000	superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Cysteine-rich domain,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
CHRM5	1133	genome.wustl.edu	37	15	34355438	34355438	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	34355438	34355438	G	-	DEL	CHRM5	NM_012125	human	genbank	57_37b	+1	validated	frame_shift_del	c.520	p.K175fs	1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	(deletion:cds_exon[34354919,34356517])	no_errors	
CLCN1	1180	genome.wustl.edu	37	7	143013381	143013381	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	143013381	143013381	C	A	SNP	CLCN1	NM_000083	human	genbank	57_37b	+1	reviewed	missense	c.76	p.P26T	1.000	NULL	superfamily_Clc chloride channel,HMMPfam_Voltage_CLC,superfamily_CBS-domain,HMMPfam_CBS	-	no_errors	
CLIP1	6249	genome.wustl.edu	37	12	122825432	122825432	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	122825432	122825432	G	C	SNP	CLIP1	NM_002956	human	genbank	57_37b	-1	validated	silent	c.2286	p.L762	0.925	NULL	superfamily_Cap-Gly domain,HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1	-	no_errors	
COMMD4	54939	genome.wustl.edu	37	15	75632150	75632150	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	75632150	75632150	G	A	SNP	COMMD4	NM_017828	human	genbank	57_37b	+1	validated	missense	c.490	p.A164T	0.000	HMMPfam_HCaRG	HMMPfam_HCaRG	-	no_errors	
CPAMD8	27151	genome.wustl.edu	37	19	17015092	17015092	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	17015092	17015092	C	A	SNP	CPAMD8	NM_015692	human	genbank	57_37b	-1	validated	missense	c.4336	p.V1446L	0.999	superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_A2M_comp	HMMPfam_A2M_N,HMMPfam_A2M_N_2,HMMPfam_A2M,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_Thiol-ester_cl,PatternScan_ALPHA_2_MACROGLOBULIN,HMMPfam_A2M_comp,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_recep,superfamily_Kazal-type serine protease inhibitors,HMMSmart_SM00280,HMMPfam_Kazal_1	-	no_errors	
CPSF1	29894	genome.wustl.edu	37	8	145623208	145623208	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	145623208	145623208	G	T	SNP	CPSF1	NM_013291	human	genbank	57_37b	-1	validated	silent	c.2034	p.R678	0.998	NULL	HMMPfam_CPSF_A	-	no_errors	
CSF2RA	1438	genome.wustl.edu	37	X	1422866	1422866	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	1422866	1422866	G	A	SNP	CSF2RA	NM_006140	human	genbank	57_37b	+1	reviewed	missense	c.997	p.V333M	0.032	NULL	superfamily_Fibronectin type III,HMMPfam_Haemat_rec_S_F2,PatternScan_HEMATOPO_REC_S_F2	-	no_errors	
DARS2	55157	genome.wustl.edu	37	1	173808592	173808592	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	173808592	173808592	G	C	SNP	DARS2	NM_018122	human	genbank	57_37b	+1	reviewed	missense	c.928	p.D310H	0.036	superfamily_SSF55681,HMMPfam_tRNA-synt_2	superfamily_Nucleic_acid_OB,HMMPfam_tRNA_anti,superfamily_SSF55681,HMMPfam_tRNA-synt_2,superfamily_SSF55261,HMMPfam_GAD	-	no_errors	
DCLK2	166614	genome.wustl.edu	37	4	151145689	151145689	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	151145689	151145689	C	G	SNP	DCLK2	NM_001040260	human	genbank	57_37b	+1	validated	missense	c.1278	p.D426E	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Doublecortin (DC),HMMSmart_SM00537,HMMPfam_DCX,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
DGKI	9162	genome.wustl.edu	37	7	137339506	137339506	+	Missense_Mutation	SNP	C	C	A	rs75772069	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	137339506	137339506	C	A	SNP	DGKI	NM_004717	human	genbank	57_37b	-1	reviewed	missense	c.710	p.R237L	1.000	NULL	PatternScan_ZF_DAG_PE_1,HMMSmart_C1,HMMPfam_C1_1,HMMPfam_DAGK_cat,HMMSmart_DAGKc,HMMPfam_DAGK_acc,HMMSmart_DAGKa,superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK	-		
DLG5	9231	genome.wustl.edu	37	10	79589152	79589152	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	79589152	79589152	C	G	SNP	DLG5	NM_004747	human	genbank	57_37b	-1	reviewed	missense	c.2146	p.V716L	1.000	superfamily_PDZ domain-like	superfamily_DEATH domain,HMMPfam_CARD,HMMPfam_DUF622,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,PatternScan_RCC1_2,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00072,HMMPfam_Guanylate_kin,HMMPfam_Gua_kin_assoc_C	-	no_errors	
DNAH5	1767	genome.wustl.edu	37	5	13868016	13868016	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	13868016	13868016	T	A	SNP	DNAH5	NM_001369	human	genbank	57_37b	-1	reviewed	missense	c.3920	p.E1307V	1.000	superfamily_Spectrin	HMMPfam_DHC_N1,superfamily_Spectrin,HMMPfam_DHC_N2,superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
DNAH9	1770	genome.wustl.edu	37	17	11515049	11515049	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	11515049	11515049	A	T	SNP	DNAH9	NM_001372	human	genbank	57_37b	+1	reviewed	missense	c.856	p.S286C	1.000	HMMPfam_DHC_N1	HMMPfam_DHC_N1,superfamily_Spectrin repeat,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy,PatternScan_CPSASE_2	-	no_errors	
DNAH9	1770	genome.wustl.edu	37	17	11786995	11786995	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	11786995	11786995	C	A	SNP	DNAH9	NM_001372	human	genbank	57_37b	+1	reviewed	missense	c.10899	p.N3633K	1.000	NULL	HMMSmart_SM00382,HMMPfam_Dynein_heavy,PatternScan_CPSASE_2,HMMPfam_AAA_5,HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_Spectrin repeat,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
DPCR1	135656	genome.wustl.edu	37	6	30916555	30916555	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	30916555	30916555	C	G	SNP	DPCR1	ENST00000462446	human	ensembl	57_37b	+1	known	missense	c.314	p.T105S	0.000	NULL	NULL	-	no_errors	
DUOX1	53905	genome.wustl.edu	37	15	45453997	45453997	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	45453997	45453997	G	A	SNP	DUOX1	NM_017434	human	genbank	57_37b	+1	reviewed	silent	c.3918	p.V1306	1.000	superfamily_Riboflavin synthase domain-like,HMMPfam_FAD_binding_8	superfamily_Heme-dependent peroxidases,HMMPfam_An_peroxidase,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_Ferric_reduct,superfamily_Riboflavin synthase domain-like,HMMPfam_FAD_binding_8,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain,HMMPfam_NAD_binding_6	-	no_errors	
DYSF	8291	genome.wustl.edu	37	2	71795113	71795113	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	71795113	71795113	G	A	SNP	DYSF	NM_001130987	human	genbank	57_37b	+1	reviewed	missense	c.2598	p.M866I	1.000	HMMPfam_FerB	HMMSmart_C2,superfamily_C2_CaLB,HMMPfam_C2,HMMPfam_FerI,HMMPfam_FerA,HMMPfam_FerB,HMMSmart_DysFN,HMMSmart_DysFC	-	no_errors	
E4F1	1877	genome.wustl.edu	37	16	2283444	2283444	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2283444	2283444	C	T	SNP	E4F1	NM_004424	human	genbank	57_37b	+1	reviewed	silent	c.1062	p.P354	0.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
EIF2B1	1967	genome.wustl.edu	37	12	124114778	124114778	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124114778	124114778	T	C	SNP	EIF2B1	NM_001414	human	genbank	57_37b	-1	reviewed	missense	c.307	p.R103G	1.000	superfamily_NagB/RpiA/CoA transferase-like,HMMPfam_IF-2B	superfamily_NagB/RpiA/CoA transferase-like,HMMPfam_IF-2B	-	no_errors	
EIF2C4	192670	genome.wustl.edu	37	1	36307019	36307019	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	36307019	36307019	C	T	SNP	EIF2C4	NM_017629	human	genbank	57_37b	+1	reviewed	missense	c.1978	p.R660C	1.000	superfamily_Ribonuclease H-like,HMMPfam_Piwi	superfamily_PAZ domain,HMMPfam_DUF1785,HMMPfam_PAZ,superfamily_Ribonuclease H-like,HMMPfam_Piwi	-	no_errors	
ELP2	55250	genome.wustl.edu	37	18	33726241	33726241	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	33726241	33726241	C	G	SNP	ELP2	NM_018255	human	genbank	57_37b	+1	provisional	missense	c.1022	p.T341S	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors	
ENSG00000167433	0	genome.wustl.edu	37	16	33738885	33738885	+	Silent	SNP	G	G	A	rs58856893	byCluster;by1000genomes	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	33738885	33738885	G	A	SNP	ENSG00000167433	ENST00000300901	human	ensembl	57_37b	-1	known	silent	c.261	p.G87	0.996	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-		
ENSG00000181943	0	genome.wustl.edu	37	11	55259427	55259427	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	55259427	55259427	G	T	SNP	ENSG00000181943	ENST00000314657	human	ensembl	57_37b	+1	known	missense	c.709	p.V237F	0.003	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors	
ENSG00000200424	0	genome.wustl.edu	37	16	58778204	58778204	+	RNA	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	58778204	58778204	C	A	SNP	ENSG00000200424	ENST00000363554	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	0.007	-	-	-	no_errors	
ENSG00000241327	0	genome.wustl.edu	37	4	105895837	105895837	+	RNA	SNP	G	A	A	rs13147309	byCluster;byFrequency;by1000genomes	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	105895837	105895837	G	A	SNP	ENSG00000241327	ENST00000462647	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.145	-	-	-		
ENSG00000245520	0	genome.wustl.edu	37	1	16956555	16956555	+	RNA	SNP	C	C	T	rs9329440	byCluster;byFrequency;by2Hit2Allele	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16956555	16956555	C	T	SNP	ENSG00000245520	ENST00000376847	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.995	-	-	-		
ENSG00000245747	0	genome.wustl.edu	37	19	8026861	8026896	+	RNA	DEL	TTTGTGATTCTCTCTGTAAACTAGTTATTTATAAAC	TTTGTGATTCTCTCTGTAAACTAGTTATTTATAAAC	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	TTTGTGATTCTCTCTGTAAACTAGTTATTTATAAAC	TTTGTGATTCTCTCTGTAAACTAGTTATTTATAAAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	8026861	8026896	TTTGTGATTCTCTCTGTAAACTAGTTATTTATAAAC	-	DEL	ENSG00000245747	ENST00000500700	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000:0.001:0.002:0.002:0.000:0.000:0.000:0.000:0.000:0.002:0.003:0.013:0.025:0.023:0.008:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.002:0.002:0.000:0.000:0.001:0.000:0.002:0.002:0.003:0.004:0.003:0.006:0.004:0.000	-	-	(deletion:rna[8023464,8026899])	no_errors	
ENSG00000246637	0	genome.wustl.edu	37	3	176750669	176750669	+	RNA	SNP	A	A	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	176750669	176750669	A	T	SNP	ENSG00000246637	ENST00000501295	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.049	-	-	-	no_errors	
ENTHD1	150350	genome.wustl.edu	37	22	40139929	40139929	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	40139929	40139929	G	T	SNP	ENTHD1	NM_152512	human	genbank	57_37b	-1	provisional	missense	c.1579	p.L527M	0.000	NULL	superfamily_ENTH/VHS domain,HMMPfam_ENTH,HMMSmart_SM00273	-	no_errors	
EPHB3	2049	genome.wustl.edu	37	3	184299147	184299147	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	184299147	184299147	G	T	SNP	EPHB3	NM_004443	human	genbank	57_37b	+1	reviewed	missense	c.2839	p.V947F	0.530	superfamily_SAM_homology,HMMSmart_SAM,HMMPfam_SAM_1	superfamily_Gal_bind_like,HMMPfam_Ephrin_lbd,HMMSmart_EPH_lbd,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,superfamily_FN_III-like,HMMPfam_fn3,HMMSmart_FN3,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,superfamily_SAM_homology,HMMSmart_SAM,HMMPfam_SAM_1	-	no_errors	
EPS8L3	79574	genome.wustl.edu	37	1	110301155	110301155	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	110301155	110301155	G	T	SNP	EPS8L3	NM_139053	human	genbank	57_37b	-1	reviewed	missense	c.595	p.L199I	0.135	NULL	HMMPfam_PTB,superfamily_SH3,HMMPfam_SH3_1,HMMSmart_SH3	-	no_errors	
ERG	2078	genome.wustl.edu	37	21	39775576	39775576	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	39775576	39775576	T	A	SNP	ERG	NM_001136154	human	genbank	57_37b	-1	validated	missense	c.465	p.K155N	0.984	superfamily_SAM/Pointed domain,HMMPfam_SAM_PNT,HMMSmart_SM00251	"superfamily_SAM/Pointed domain,HMMPfam_SAM_PNT,HMMSmart_SM00251,superfamily_""Winged helix"" DNA-binding domain,HMMPfam_Ets,HMMSmart_SM00413,PatternScan_ETS_DOMAIN_1,PatternScan_ETS_DOMAIN_2"	-	no_errors	
EVPL	2125	genome.wustl.edu	37	17	74006094	74006094	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	74006094	74006094	C	G	SNP	EVPL	NM_001988	human	genbank	57_37b	-1	validated	missense	c.3192	p.E1064D	1.000	NULL	superfamily_Spectrin repeat,HMMSmart_SM00150,HMMSmart_SM00250,superfamily_Prefoldin,superfamily_Plakin repeat,HMMPfam_Plectin	-	no_errors	
EZR	7430	genome.wustl.edu	37	6	159190927	159190927	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	159190927	159190927	C	A	SNP	EZR	NM_001111077	human	genbank	57_37b	-1	reviewed	missense	c.1140	p.K380N	0.985	HMMPfam_ERM	HMMSmart_B41,superfamily_SSF54236,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_FERM_3-hlx,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_SSF50729,HMMPfam_FERM_C,HMMPfam_ERM,superfamily_Moesin	-	no_errors	
FAM117B	150864	genome.wustl.edu	37	2	203560685	203560685	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	203560685	203560685	A	T	SNP	FAM117B	ENST00000392238	human	ensembl	57_37b	+1	known	missense	c.683	p.Y228F	1.000	NULL	NULL	-	no_errors	
FAM123C	205147	genome.wustl.edu	37	2	131520314	131520314	+	Silent	SNP	G	G	A	rs113140060	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	131520314	131520314	G	A	SNP	FAM123C	NM_001105193	human	genbank	57_37b	+1	validated	silent	c.669	p.L223	0.000	HMMPfam_WTX	HMMPfam_WTX	-		
FILIP1	27145	genome.wustl.edu	37	6	76023340	76023340	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	76023340	76023340	G	T	SNP	FILIP1	NM_015687	human	genbank	57_37b	-1	validated	missense	c.2208	p.N736K	1.000	NULL	HMMPfam_CortBP2	-	no_errors	
FRY	10129	genome.wustl.edu	37	13	32818202	32818218	+	Frame_Shift_Del	DEL	TGTGCAGCAGCCCCTGC	TGTGCAGCAGCCCCTGC	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	TGTGCAGCAGCCCCTGC	TGTGCAGCAGCCCCTGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	32818202	32818218	TGTGCAGCAGCCCCTGC	-	DEL	FRY	NM_023037	human	genbank	57_37b	+1	validated	frame_shift_del	c.6711_6727	p.V2238fs	0.350:0.993:1.000:1.000:1.000:1.000:0.998:1.000:1.000:1.000:1.000:1.000:0.962:0.994:0.999:0.943:0.995	NULL	PatternScan_GHMP_KINASES_ATP	(deletion:cds_exon[32818179,32818319])	no_errors	
GAGE10	643832	genome.wustl.edu	37	X	49173663	49173663	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	49173663	49173663	G	T	SNP	GAGE10	NM_001098413	human	genbank	57_37b	+1	provisional	missense	c.224	p.S75I	0.000	HMMPfam_GAGE	HMMPfam_GAGE	-	no_errors	
GALNT1	2589	genome.wustl.edu	37	18	33267013	33267013	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	33267013	33267013	C	T	SNP	GALNT1	NM_020474	human	genbank	57_37b	+1	reviewed	silent	c.723	p.I241	1.000	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,HMMSmart_SM00458,HMMPfam_Ricin_B_lectin	-	no_errors	
GH2	2689	genome.wustl.edu	37	17	61958115	61958115	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	61958115	61958115	C	A	SNP	GH2	NM_022557	human	genbank	57_37b	-1	reviewed	missense	c.473	p.G158V	0.002	superfamily_4-helical cytokines	HMMPfam_Hormone_1,superfamily_4-helical cytokines,PatternScan_SOMATOTROPIN_1	-	no_errors	
GHSR	2693	genome.wustl.edu	37	3	172165999	172165999	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	172165999	172165999	A	T	SNP	GHSR	NM_198407	human	genbank	57_37b	-1	reviewed	missense	c.205	p.S69T	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
GIPC2	54810	genome.wustl.edu	37	1	78546542	78546546	+	In_Frame_Del	DEL	AAGGT	AAGGT	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	AAGGT	AAGGT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	78546542	78546546	AAGGT	-	DEL	GIPC2	NM_017655	human	genbank	57_37b	+1	validated	in_frame_del	c.424_426	p.K142in_frame_del	1.000:1.000:1.000	superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	(deletion:cds_exon[78546359,78546544], intron[78546545,78560635])	no_errors	
GOLGB1	2804	genome.wustl.edu	37	3	121415745	121415745	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	121415745	121415745	C	A	SNP	GOLGB1	NM_004487	human	genbank	57_37b	-1	validated	nonsense	c.3610	p.E1204*	1.000	superfamily_Prefoldin	superfamily_Spectrin repeat,superfamily_Prefoldin,HMMSmart_SM00340	-	no_errors	
GPR158	57512	genome.wustl.edu	37	10	25755604	25755604	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	25755604	25755604	C	A	SNP	GPR158	NM_020752	human	genbank	57_37b	+1	validated	missense	c.1360	p.L454M	1.000	HMMPfam_7tm_3	PatternScan_G_PROTEIN_RECEP_F3_1,PatternScan_G_PROTEIN_RECEP_F3_2,PatternScan_G_PROTEIN_RECEP_F3_3,HMMPfam_7tm_3	-	no_errors	
GRIA1	2890	genome.wustl.edu	37	5	153085287	153085303	+	Frame_Shift_Del	DEL	ATCACTTTGGTCCGGGA	ATCACTTTGGTCCGGGA	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	ATCACTTTGGTCCGGGA	ATCACTTTGGTCCGGGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	153085287	153085303	ATCACTTTGGTCCGGGA	-	DEL	GRIA1	NM_000827	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.1483_1499	p.I495fs	1.000:1.000:1.000:1.000:1.000:0.992:0.999:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.998:1.000:1.000	HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan	(deletion:cds_exon[153085257,153085627])	no_errors	
GRM3	2913	genome.wustl.edu	37	7	86468211	86468211	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	86468211	86468211	G	C	SNP	GRM3	NM_000840	human	genbank	57_37b	+1	reviewed	missense	c.1381	p.D461H	1.000	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,PatternScan_G_PROTEIN_RECEP_F3_1,HMMPfam_NCD3G,PatternScan_G_PROTEIN_RECEP_F3_2,HMMPfam_7tm_3,PatternScan_G_PROTEIN_RECEP_F3_3	-	no_errors	
GTF3A	2971	genome.wustl.edu	37	13	27998983	27998983	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	27998983	27998983	C	T	SNP	GTF3A	NM_002097	human	genbank	57_37b	+1	reviewed	missense	c.109	p.P37S	0.000	NULL	HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers	-	no_errors	
HAP1	9001	genome.wustl.edu	37	17	39889028	39889028	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39889028	39889028	C	T	SNP	HAP1	NM_177977	human	genbank	57_37b	-1	reviewed	silent	c.492	p.P164	0.000	HMMPfam_HAP1_N	HMMPfam_HAP1_N	-	no_errors	
HCN4	10021	genome.wustl.edu	37	15	73624616	73624616	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	73624616	73624616	G	A	SNP	HCN4	NM_005477	human	genbank	57_37b	-1	reviewed	silent	c.1227	p.Y409	0.997	superfamily_SSF81324,HMMPfam_Ion_trans	PatternScan_CNMP_BINDING_2,HMMPfam_Ion_trans_N,superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1	-	no_errors	
HDGFRP2	0	genome.wustl.edu	37	19	4493843	4493843	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	4493843	4493843	G	T	SNP	HDGFRP2	NM_001001520	human	genbank	57_37b	+1	reviewed	silent	c.822	p.P274	0.000	NULL	superfamily_Tudor/PWWP/MBT,HMMPfam_PWWP,HMMSmart_SM00293	-	no_errors	
HELZ	9931	genome.wustl.edu	37	17	65144684	65144684	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	65144684	65144684	C	A	SNP	HELZ	NM_014877	human	genbank	57_37b	-1	validated	splice_site	c.2621+1	e17+1	1.000	-	-	-	no_errors	
HEPHL1	341208	genome.wustl.edu	37	11	93819195	93819195	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	93819195	93819195	G	T	SNP	HEPHL1	NM_001098672	human	genbank	57_37b	+1	validated	missense	c.1920	p.R640S	0.721	superfamily_Cupredoxin	superfamily_Cupredoxin,HMMPfam_Cu-oxidase_3,HMMPfam_Cu-oxidase_2,PatternScan_MULTICOPPER_OXIDASE1,PatternScan_MULTICOPPER_OXIDASE2	-	no_errors	
HERC3	8916	genome.wustl.edu	37	4	89597532	89597532	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	89597532	89597532	C	T	SNP	HERC3	NM_014606	human	genbank	57_37b	+1	provisional	silent	c.1983	p.A661	1.000	NULL	superfamily_RCC1/BLIP-II,PatternScan_RCC1_2,HMMPfam_RCC1,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors	
HIPK1	204851	genome.wustl.edu	37	1	114514630	114514630	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	114514630	114514630	C	T	SNP	HIPK1	NM_152696	human	genbank	57_37b	+1	reviewed	silent	c.3198	p.F1066	0.904	NULL	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
HIPK4	147746	genome.wustl.edu	37	19	40889772	40889772	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	40889772	40889772	T	A	SNP	HIPK4	NM_144685	human	genbank	57_37b	-1	provisional	missense	c.740	p.H247L	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
HNRNPCL1	343069	genome.wustl.edu	37	1	12907909	12907909	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	12907909	12907909	C	G	SNP	HNRNPCL1	NM_001013631	human	genbank	57_37b	-1	validated	missense	c.234	p.Q78H	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
HPCA	3208	genome.wustl.edu	37	1	33359202	33359202	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	33359202	33359202	C	A	SNP	HPCA	NM_002143	human	genbank	57_37b	+1	reviewed	silent	c.456	p.I152	1.000	superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand	superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1	-	no_errors	
HSD17B2	3294	genome.wustl.edu	37	16	82069075	82069075	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	82069075	82069075	C	A	SNP	HSD17B2	NM_002153	human	genbank	57_37b	+1	validated	missense	c.46	p.P16T	0.001	NULL	PatternScan_2FE2S_FER_1,superfamily_NAD(P)-binding Rossmann-fold domains,HMMPfam_adh_short,PatternScan_ADH_SHORT	-	no_errors	
HTR5A	3361	genome.wustl.edu	37	7	154862919	154862919	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	154862919	154862919	G	T	SNP	HTR5A	NM_024012	human	genbank	57_37b	+1	reviewed	missense	c.310	p.G104W	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
IDS	3423	genome.wustl.edu	37	X	148568462	148568462	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	148568462	148568462	C	T	SNP	IDS	NM_000202	human	genbank	57_37b	-1	reviewed	missense	c.1174	p.E392K	0.000	superfamily_Alkaline phosphatase-like	HMMPfam_Sulfatase,superfamily_Alkaline phosphatase-like,PatternScan_SULFATASE_1,PatternScan_SULFATASE_2	-	no_errors	
IKBKB	3551	genome.wustl.edu	37	8	42177138	42177138	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	42177138	42177138	G	A	SNP	IKBKB	NM_001556	human	genbank	57_37b	+1	validated	missense	c.1552	p.E518K	1.000	NULL	PatternScan_PROTEIN_KINASE_ATP,superfamily_Kinase_like,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,HMMPfam_ubiquitin	-	no_errors	
IKZF2	22807	genome.wustl.edu	37	2	213872586	213872586	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	213872586	213872586	T	A	SNP	IKZF2	NM_016260	human	genbank	57_37b	-1	reviewed	missense	c.1079	p.H360L	1.000	NULL	HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2	-	no_errors	
ISCA1L	389293	genome.wustl.edu	37	5	62072647	62072647	+	Silent	SNP	C	G	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	62072647	62072647	C	G	SNP	ISCA1L	NM_001080540	human	genbank	57_37b	-1	provisional	silent	c.351	p.G117	0.136	NULL	superfamily_HesB_yadR_yfhF-like,HMMPfam_Fe-S_biosyn	-	no_errors	
KCNA5	3741	genome.wustl.edu	37	12	5154349	5154349	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	5154349	5154349	T	A	SNP	KCNA5	NM_002234	human	genbank	57_37b	+1	reviewed	missense	c.1036	p.C346S	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_POZ domain,HMMSmart_SM00225,HMMPfam_K_tetra,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors	
KCNU1	0	genome.wustl.edu	37	8	36671892	36671892	+	Silent	SNP	T	C	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	36671892	36671892	T	C	SNP	KCNU1	NM_001031836	human	genbank	57_37b	+1	validated	silent	c.900	p.S300	1.000	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_NAD(P)-bd,HMMPfam_BK_channel_a	-	no_errors	
KIAA1107	23285	genome.wustl.edu	37	1	92634546	92634546	+	Nonsense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	92634546	92634546	C	T	SNP	KIAA1107	NM_015237	human	genbank	57_37b	+1	validated	nonsense	c.253	p.Q85*	1.000	NULL	NULL	-	no_errors	
KIAA1751	85452	genome.wustl.edu	37	1	1895246	1895259	+	Frame_Shift_Del	DEL	TCGTGTAGGTGGTG	TCGTGTAGGTGGTG	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	TCGTGTAGGTGGTG	TCGTGTAGGTGGTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	1895246	1895259	TCGTGTAGGTGGTG	-	DEL	KIAA1751	NM_001080484	human	genbank	57_37b	-1	predicted	frame_shift_del	c.1636_1623	p.T542fs	0.894:0.486:0.934:0.975:1.000:1.000:0.999:0.982:1.000:1.000:1.000:0.999:0.968:0.869	NULL	NULL	(deletion:cds_exon[1895188,1895306])	no_errors	
KIRREL2	84063	genome.wustl.edu	37	19	36352899	36352899	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	36352899	36352899	G	T	SNP	KIRREL2	NM_199180	human	genbank	57_37b	+1	validated	missense	c.1483	p.G495C	0.019	superfamily_Immunoglobulin,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_C2-set_2,HMMPfam_I-set	-	no_errors	
KLKB1	3818	genome.wustl.edu	37	4	187159474	187159474	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	187159474	187159474	G	A	SNP	KLKB1	NM_000892	human	genbank	57_37b	+1	reviewed	missense	c.553	p.V185M	0.070	HMMSmart_APPLE,PatternScan_APPLE,HMMPfam_PAN_1	HMMSmart_APPLE,PatternScan_APPLE,HMMPfam_PAN_1,superfamily_Pept_Ser_Cys,HMMSmart_Tryp_SPc,HMMPfam_Trypsin,PatternScan_TRYPSIN_HIS,PatternScan_TRYPSIN_SER	-	no_errors	
KNDC1	85442	genome.wustl.edu	37	10	135012652	135012652	+	Silent	SNP	T	C	C	rs3008388	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	135012652	135012652	T	C	SNP	KNDC1	NM_152643	human	genbank	57_37b	+1	validated	silent	c.2640	p.D880	0.005	NULL	HMMSmart_SM00750,superfamily_Ras GEF,HMMSmart_SM00229,HMMPfam_RasGEF_N,HMMSmart_SM00147,HMMPfam_RasGEF	-		
KRBA1	84626	genome.wustl.edu	37	7	149425677	149425677	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149425677	149425677	C	T	SNP	KRBA1	ENST00000255992	human	ensembl	57_37b	+1	known	missense	c.1538	p.P513L	0.000	NULL	NULL	-	no_errors	
KRT31	3881	genome.wustl.edu	37	17	39553726	39553726	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39553726	39553726	C	A	SNP	KRT31	NM_002277	human	genbank	57_37b	-1	reviewed	silent	c.66	p.V22	0.001	NULL	HMMPfam_Filament,PatternScan_IF	-	no_errors	
KRT36	8689	genome.wustl.edu	37	17	39645694	39645694	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39645694	39645694	C	A	SNP	KRT36	NM_003771	human	genbank	57_37b	-1	reviewed	missense	c.423	p.Q141H	0.986	HMMPfam_Filament	HMMPfam_Filament,superfamily_Prefoldin,PatternScan_IF	-	no_errors	
KRTAP10-7	386675	genome.wustl.edu	37	21	46021285	46021285	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	46021285	46021285	G	T	SNP	KRTAP10-7	ENST00000380102	human	ensembl	57_37b	+1	known	missense	c.764	p.C255F	0.994	HMMPfam_Keratin_B2	HMMPfam_Keratin_B2	-	no_errors	
LAS1L	81887	genome.wustl.edu	37	X	64734836	64734836	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	64734836	64734836	T	G	SNP	LAS1L	NM_031206	human	genbank	57_37b	-1	validated	missense	c.1945	p.T649P	0.002	NULL	HMMPfam_Las1	-	no_errors	
LCT	3938	genome.wustl.edu	37	2	136575337	136575337	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	136575337	136575337	C	T	SNP	LCT	NM_002299	human	genbank	57_37b	-1	reviewed	silent	c.1281	p.E427	0.074	HMMPfam_Glyco_hydro_1,superfamily_Glyco_hydro_cat	superfamily_Glyco_hydro_cat,HMMPfam_Glyco_hydro_1,PatternScan_GLYCOSYL_HYDROL_F1_2,PatternScan_GLYCOSYL_HYDROL_F1_1	-	no_errors	
LIG3	3980	genome.wustl.edu	37	17	33310177	33310177	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	33310177	33310177	G	T	SNP	LIG3	NM_013975	human	genbank	57_37b	+1	reviewed	silent	c.153	p.L51	0.929	NULL	superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMPfam_zf-PARP,PatternScan_PARP_ZN_FINGER_1,HMMPfam_DNA_ligase_A_N,superfamily_DNA ligase/mRNA capping enzyme catalytic domain,HMMPfam_DNA_ligase_A_M,PatternScan_DNA_LIGASE_A1,PatternScan_DNA_LIGASE_A2,HMMPfam_DNA_ligase_A_C,superfamily_BRCT domain,HMMSmart_SM00292	-	no_errors	
LOC100130599	0	genome.wustl.edu	37	21	46122300	46122301	+	In_Frame_Ins	INS	-	-	CCAGCGCCTGCCAATCAGGCTGCA	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	46122300	46122301	-	CCAGCGCCTGCCAATCAGGCTGCA	INS	LOC100130599	XM_002343756	human	genbank	57_37b	+1	model	in_frame_ins	c.556_557	p.188in_frame_insACQSGCTS	0.665:0.600	HMMPfam_Keratin_B2	HMMPfam_Keratin_B2	-	no_errors	
LOC100132405	0	genome.wustl.edu	37	3	131080999	131080999	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	131080999	131080999	G	C	SNP	LOC100132405	XM_002342370	human	genbank	57_37b	-1	model	missense	c.348	p.S116R	0.000	NULL	NULL	-	no_errors	
LOC100287256	0	genome.wustl.edu	37	4	80993727	80993727	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	80993727	80993727	G	A	SNP	LOC100287256	XM_002342456	human	genbank	57_37b	+1	model	missense	c.98	p.G33E	0.000	NULL	NULL	-	no_errors	
LOC100287722	0	genome.wustl.edu	37	1	114447319	114447319	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	114447319	114447319	C	T	SNP	LOC100287722	XM_002342103	human	genbank	57_37b	+1	model	missense	c.373	p.L125F	1.000	NULL	NULL	-	no_errors	
LOC100287897	0	genome.wustl.edu	37	12	113403850	113403850	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	113403850	113403850	G	A	SNP	LOC100287897	XM_002343215	human	genbank	57_37b	-1	model	missense	c.91	p.R31C	0.000	NULL	NULL	-	no_errors	
LOC100289317	0	genome.wustl.edu	37	22	45723958	45723958	+	Missense_Mutation	SNP	G	G	C	rs113718742	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	45723958	45723958	G	C	SNP	LOC100289317	XM_002343782	human	genbank	57_37b	-1	model	missense	c.284	p.T95S	0.007	NULL	NULL	-		
LOC390956	390956	genome.wustl.edu	37	19	51430695	51430695	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51430695	51430695	C	A	SNP	LOC390956	XM_372741	human	genbank	57_37b	-1	model	missense	c.200	p.G67V	1.000	superfamily_Cyclophilin-like,HMMPfam_Pro_isomerase	superfamily_Cyclophilin-like,HMMPfam_Pro_isomerase,PatternScan_CSA_PPIASE_1	-	no_errors	
LOC440243	440243	genome.wustl.edu	37	15	23579246	23579246	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	23579246	23579246	G	C	SNP	LOC440243	XM_496041	human	genbank	57_37b	-1	model	missense	c.298	p.L100V	0.191	NULL	NULL	-	no_errors	
LOC440518	440518	genome.wustl.edu	37	19	22780092	22780102	+	RNA	DEL	GACTATCAGTG	GACTATCAGTG	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	GACTATCAGTG	GACTATCAGTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	22780092	22780102	GACTATCAGTG	-	DEL	LOC440518	XR_041921	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.066:0.060:0.061:0.070:0.075:0.076:0.075:0.069:0.060:0.044:0.038	-	-	(deletion:rna[22780086,22780202])	no_errors	
LOC645490	645490	genome.wustl.edu	37	11	20596356	20596356	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	20596356	20596356	C	T	SNP	LOC645490	XM_928515	human	genbank	57_37b	+1	model	missense	c.818	p.A273V	0.971	superfamily_HMG-box,HMMSmart_SM00398,HMMPfam_HMG_box	HMMSmart_SM00398,superfamily_HMG-box,HMMPfam_HMG_box	-	no_errors	
LRRC33	375387	genome.wustl.edu	37	3	196387493	196387493	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	196387493	196387493	C	G	SNP	LRRC33	NM_198565	human	genbank	57_37b	+1	provisional	missense	c.979	p.L327V	1.000	superfamily_SSF52058	superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP	-	no_errors	
LRRC37A3	374819	genome.wustl.edu	37	17	62856626	62856626	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	62856626	62856626	T	C	SNP	LRRC37A3	NM_199340	human	genbank	57_37b	-1	provisional	missense	c.3638	p.E1213G	0.006	NULL	superfamily_SSF52058,HMMSmart_LRR_TYP,HMMPfam_LRR_1	-	no_errors	
LRRC42	115353	genome.wustl.edu	37	1	54433480	54433480	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	54433480	54433480	C	G	SNP	LRRC42	NM_052940	human	genbank	57_37b	+1	provisional	missense	c.1155	p.S385R	0.743	NULL	superfamily_SSF52047	-	no_errors	
LYN	4067	genome.wustl.edu	37	8	56863331	56863331	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	56863331	56863331	G	A	SNP	LYN	NM_002350	human	genbank	57_37b	+1	validated	missense	c.475	p.E159K	1.000	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
LYSMD3	116068	genome.wustl.edu	37	5	89815236	89815236	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	89815236	89815236	G	C	SNP	LYSMD3	NM_198273	human	genbank	57_37b	-1	validated	missense	c.321	p.I107M	1.000	HMMSmart_SM00257	HMMSmart_SM00257,HMMPfam_LysM	-	no_errors	
MACF1	23499	genome.wustl.edu	37	1	39753221	39753222	+	Frame_Shift_Del	DEL	TA	TA	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	TA	TA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	39753221	39753222	TA	-	DEL	MACF1	NM_012090	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.1787_1788	p.V596fs	1.000:0.998	HMMSmart_SM00150,superfamily_Spectrin repeat	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,HMMPfam_Spectrin,PatternScan_GLYCOSYL_HYDROL_F5,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_GAS2,HMMSmart_SM00243	(deletion:cds_exon[39752958,39753234])	no_errors	
MAPK13	5603	genome.wustl.edu	37	6	36098410	36098410	+	Silent	SNP	A	A	C	rs1059227	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	36098410	36098410	A	C	SNP	MAPK13	NM_002754	human	genbank	57_37b	+1	reviewed	silent	c.51	p.T17	0.852	superfamily_Protein kinase-like (PK-like)	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_MAPK	-		
MORC1	27136	genome.wustl.edu	37	3	108812333	108812333	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	108812333	108812333	C	A	SNP	MORC1	NM_014429	human	genbank	57_37b	-1	reviewed	missense	c.639	p.L213F	1.000	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	superfamily_ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase,HMMPfam_HATPase_c,HMMPfam_zf-CW	-	no_errors	
MOSPD3	64598	genome.wustl.edu	37	7	100210890	100210890	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100210890	100210890	C	T	SNP	MOSPD3	NM_001040097	human	genbank	57_37b	+1	reviewed	silent	c.279	p.D93	1.000	HMMPfam_Motile_Sperm,superfamily_PapD-like	HMMPfam_Motile_Sperm,superfamily_PapD-like	-	no_errors	
MUC17	140453	genome.wustl.edu	37	7	100684815	100684815	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100684815	100684815	C	T	SNP	MUC17	NM_001040105	human	genbank	57_37b	+1	provisional	missense	c.10118	p.T3373I	0.000	NULL	superfamily_EGF/Laminin,PatternScan_EGF_1,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors	
MUC5B	727897	genome.wustl.edu	37	11	1262629	1262629	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1262629	1262629	T	G	SNP	MUC5B	NM_002458	human	genbank	57_37b	+1	validated	missense	c.4528	p.C1510G	0.751	NULL	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,PatternScan_VWFC_1,HMMPfam_VWC,HMMSmart_SM00041,HMMPfam_Cys_knot,PatternScan_CTCK_1	-	no_errors	
MYCBP2	23077	genome.wustl.edu	37	13	77672956	77672956	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	77672956	77672956	T	A	SNP	MYCBP2	NM_015057	human	genbank	57_37b	-1	validated	missense	c.8219	p.K2740M	1.000	NULL	superfamily_RCC1/BLIP-II,PatternScan_RCC1_2,HMMPfam_RCC1,HMMPfam_PHR,superfamily_E set domains,superfamily_Galactose-binding domain-like,superfamily_RING/U-box,HMMSmart_SM00184	-	no_errors	
MYH4	4622	genome.wustl.edu	37	17	10348650	10348652	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	CTT	CTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	10348650	10348652	CTT	-	DEL	MYH4	NM_017533	human	genbank	57_37b	-1	validated	in_frame_del	c.5199_5197	p.K1733in_frame_del	1.000:1.000:1.000	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_Myosin_tail_1	(deletion:cds_exon[10348554,10348679])	no_errors	
MYH7	4625	genome.wustl.edu	37	14	23898233	23898233	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23898233	23898233	G	A	SNP	MYH7	NM_000257	human	genbank	57_37b	-1	reviewed	silent	c.1338	p.T446	0.993	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Prefoldin,HMMPfam_Myosin_tail_1	-	no_errors	
MYLK	4638	genome.wustl.edu	37	3	123512607	123512607	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	123512607	123512607	G	T	SNP	MYLK	NM_053025	human	genbank	57_37b	-1	reviewed	missense	c.82	p.P28T	0.531	superfamily_Immunoglobulin	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
MYO18B	84700	genome.wustl.edu	37	22	26307000	26307000	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	26307000	26307000	G	A	SNP	MYO18B	NM_032608	human	genbank	57_37b	+1	reviewed	missense	c.5347	p.G1783R	0.815	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMPfam_IQ	-	no_errors	
NARS	4677	genome.wustl.edu	37	18	55274697	55274697	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	55274697	55274697	G	T	SNP	NARS	NM_004539	human	genbank	57_37b	-1	validated	missense	c.780	p.F260L	1.000	HMMPfam_tRNA-synt_2,superfamily_SSF55681	superfamily_Nucleic_acid_OB,HMMPfam_tRNA_anti,HMMPfam_tRNA-synt_2,superfamily_SSF55681	-	no_errors	
NAV3	89795	genome.wustl.edu	37	12	78604291	78604291	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	78604291	78604291	C	A	SNP	NAV3	NM_014903	human	genbank	57_37b	+1	validated	silent	c.7086	p.T2362	0.981	NULL	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,HMMSmart_SM00033,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382	-	no_errors	
NBEAL2	23218	genome.wustl.edu	37	3	47041418	47041422	+	Frame_Shift_Del	DEL	CTTCT	CTTCT	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	CTTCT	CTTCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	47041418	47041422	CTTCT	-	DEL	NBEAL2	NM_015175	human	genbank	57_37b	+1	validated	frame_shift_del	c.3829_3833	p.L1277fs	1.000:1.000:0.984:1.000:1.000	NULL	superfamily_ARM repeat,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	(deletion:cds_exon[47041379,47041894])	no_errors	
NCOR2	9612	genome.wustl.edu	37	12	124824901	124824901	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124824901	124824901	C	A	SNP	NCOR2	NM_006312	human	genbank	57_37b	-1	validated	missense	c.5448	p.E1816D	0.997	NULL	superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	-	no_errors	
NDUFB4	4710	genome.wustl.edu	37	3	120315286	120315286	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	120315286	120315286	C	T	SNP	NDUFB4	NM_004547	human	genbank	57_37b	+1	reviewed	missense	c.80	p.P27L	0.995	HMMPfam_NDUF_B4	HMMPfam_NDUF_B4	-	no_errors	
NEK8	284086	genome.wustl.edu	37	17	27065227	27065227	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	27065227	27065227	G	T	SNP	NEK8	NM_178170	human	genbank	57_37b	+1	reviewed	missense	c.1186	p.V396L	1.000	superfamily_RCC1/BLIP-II	PatternScan_RCC1_1,PatternScan_RCC1_2,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,superfamily_RCC1/BLIP-II,HMMPfam_RCC1	-	no_errors	
NIPAL4	348938	genome.wustl.edu	37	5	156890274	156890274	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	156890274	156890274	C	T	SNP	NIPAL4	NM_001099287	human	genbank	57_37b	+1	reviewed	silent	c.396	p.I132	0.996	HMMPfam_DUF803	HMMPfam_DUF803,superfamily_Multidrug resistance efflux transporter EmrE	-	no_errors	
NLRP12	91662	genome.wustl.edu	37	19	54314363	54314363	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	54314363	54314363	C	T	SNP	NLRP12	NM_144687	human	genbank	57_37b	-1	reviewed	missense	c.550	p.A184T	0.000	NULL	HMMPfam_PAAD_DAPIN,superfamily_DEATH domain,HMMPfam_NACHT,superfamily_RNI-like,HMMSmart_SM00368	-	no_errors	
NOBOX	135935	genome.wustl.edu	37	7	144101772	144101772	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	144101772	144101772	C	T	SNP	NOBOX	NM_001080413	human	genbank	57_37b	-1	provisional	silent	c.87	p.G29	0.000	NULL	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox	-	no_errors	
NOX5	79400	genome.wustl.edu	37	15	69328237	69328237	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	69328237	69328237	C	T	SNP	NOX5	NM_024505	human	genbank	57_37b	+1	provisional	silent	c.1095	p.I365	0.981	HMMPfam_Ferric_reduct	superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_Ferric_reduct,superfamily_Riboflavin_synthase_like_b-brl,HMMPfam_FAD_binding_8,superfamily_SSF52343,HMMPfam_NAD_binding_6	-	no_errors	
ODZ3	55714	genome.wustl.edu	37	4	183522142	183522142	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	183522142	183522142	T	A	SNP	ODZ3	NM_001080477	human	genbank	57_37b	+1	provisional	missense	c.577	p.S193T	0.970	HMMPfam_Ten_N	HMMPfam_Ten_N,HMMPfam_EGF_2,superfamily_ConA_like_lec_gl,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_SSF57196,HMMSmart_EGF,superfamily_CarboxypepD_reg,superfamily_SSF101898,HMMPfam_NHL,superfamily_SSF63829,HMMPfam_RHS_repeat	-	no_errors	
OPN4	94233	genome.wustl.edu	37	10	88425489	88425489	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	88425489	88425489	G	T	SNP	OPN4	NM_001030015	human	genbank	57_37b	+1	validated	missense	c.1451	p.S484I	0.049	NULL	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_OPSIN	-	no_errors	
OR51F2	119694	genome.wustl.edu	37	11	4842915	4842915	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	4842915	4842915	G	T	SNP	OR51F2	NM_001004753	human	genbank	57_37b	+1	provisional	missense	c.300	p.W100C	1.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR5AN1	390195	genome.wustl.edu	37	11	59131936	59131936	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	59131936	59131936	C	T	SNP	OR5AN1	NM_001004729	human	genbank	57_37b	+1	provisional	missense	c.5	p.T2I	0.002	superfamily_SSF81321	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR5V1	81696	genome.wustl.edu	37	6	29323322	29323322	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	29323322	29323322	G	C	SNP	OR5V1	NM_030876	human	genbank	57_37b	-1	validated	silent	c.651	p.S217	0.066	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OSBPL5	114879	genome.wustl.edu	37	11	3111849	3111849	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	3111849	3111849	T	A	SNP	OSBPL5	NM_020896	human	genbank	57_37b	-1	reviewed	silent	c.2337	p.G779	0.997	NULL	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMPfam_Oxysterol_BP,PatternScan_OSBP	-	no_errors	
PCDH12	51294	genome.wustl.edu	37	5	141329074	141329074	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	141329074	141329074	G	A	SNP	PCDH12	NM_016580	human	genbank	57_37b	-1	reviewed	missense	c.3053	p.P1018L	0.071	NULL	superfamily_Cadherin,HMMPfam_Cadherin_2,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDH15	65217	genome.wustl.edu	37	10	55826517	55826517	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	55826517	55826517	T	A	SNP	PCDH15	NM_001142763	human	genbank	57_37b	-1	reviewed	missense	c.2235	p.K745N	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like,HMMPfam_Cadherin	-	no_errors	
PHF2	5253	genome.wustl.edu	37	9	96425216	96425216	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	96425216	96425216	A	-	DEL	PHF2	NM_005392	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.1726	p.N576fs	0.977	NULL	superfamily_FYVE_PHD_ZnF,HMMSmart_PHD,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_SSF51197,HMMSmart_JmjC,HMMPfam_JmjC	(deletion:cds_exon[96425189,96425308])	no_errors	
PKDCC	0	genome.wustl.edu	37	2	42284801	42284801	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	42284801	42284801	G	A	SNP	PKDCC	NM_138370	human	genbank	57_37b	+1	validated	silent	c.1455	p.K485	1.000	NULL	superfamily_Protein kinase-like (PK-like)	-	no_errors	
PLEK2	26499	genome.wustl.edu	37	14	67854072	67854081	+	Frame_Shift_Del	DEL	TCCACTCGGC	TCCACTCGGC	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	TCCACTCGGC	TCCACTCGGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	67854072	67854081	TCCACTCGGC	-	DEL	PLEK2	NM_016445	human	genbank	57_37b	-1	provisional	frame_shift_del	c.1036_1027	p.A343fs	1.000:1.000:1.000:1.000:1.000:1.000:0.995:0.000:0.000:0.005	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,superfamily_SSF46785,HMMPfam_DEP,HMMSmart_DEP	(deletion:cds_exon[67854046,67854173])	no_errors	
PLEKHA4	57664	genome.wustl.edu	37	19	49344514	49344514	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	49344514	49344514	G	C	SNP	PLEKHA4	NM_020904	human	genbank	57_37b	-1	validated	silent	c.1797	p.R599	0.989	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors	
PM20D1	148811	genome.wustl.edu	37	1	205797837	205797837	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	205797837	205797837	C	A	SNP	PM20D1	NM_152491	human	genbank	57_37b	-1	validated	missense	c.1420	p.A474S	0.265	superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M20	superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M20,HMMPfam_M20_dimer,superfamily_Bacterial exopeptidase dimerisation domain	-	no_errors	
PM20D1	148811	genome.wustl.edu	37	1	205814011	205814011	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	205814011	205814011	G	A	SNP	PM20D1	NM_152491	human	genbank	57_37b	-1	validated	silent	c.504	p.A168	0.987	HMMPfam_Peptidase_M20,superfamily_Zn-dependent exopeptidases	HMMPfam_Peptidase_M20,HMMPfam_M20_dimer,superfamily_Bacterial exopeptidase dimerisation domain,superfamily_Zn-dependent exopeptidases	-	no_errors	
PMEPA1	56937	genome.wustl.edu	37	20	56227204	56227204	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	56227204	56227204	C	A	SNP	PMEPA1	NM_020182	human	genbank	57_37b	-1	validated	nonsense	c.769	p.E257*	1.000	NULL	NULL	-	no_errors	
POLD4	57804	genome.wustl.edu	37	11	67119477	67119477	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	67119477	67119477	A	G	SNP	POLD4	NM_021173	human	genbank	57_37b	-1	validated	missense	c.313	p.Y105H	0.999	NULL	HMMPfam_DNA_pol_delta_4	-	no_errors	
PPAN	56342	genome.wustl.edu	37	19	10224439	10224439	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	10224439	10224439	G	T	SNP	PPAN	ENST00000428358	human	ensembl	57_37b	+1	known	missense	c.1472	p.C491F	0.987	NULL	HMMPfam_Brix	-	no_errors	
PPAP2A	8611	genome.wustl.edu	37	5	54771192	54771192	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	54771192	54771192	A	C	SNP	PPAP2A	NM_003711	human	genbank	57_37b	-1	reviewed	missense	c.145	p.Y49D	1.000	superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase	superfamily_Acid phosphatase/Vanadium-dependent haloperoxidase,HMMPfam_PAP2,HMMSmart_SM00014	-	no_errors	
PPFIA1	8500	genome.wustl.edu	37	11	70118391	70118391	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	70118391	70118391	A	C	SNP	PPFIA1	NM_003626	human	genbank	57_37b	+1	reviewed	missense	c.113	p.Q38P	1.000	NULL	superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1,HMMPfam_SAM_2	-	no_errors	
PRMT2	3275	genome.wustl.edu	37	21	48081768	48081768	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	48081768	48081768	C	T	SNP	PRMT2	NM_001535	human	genbank	57_37b	+1	validated	silent	c.1017	p.F339	1.000	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_MTS	-	no_errors	
PROCR	10544	genome.wustl.edu	37	20	33764173	33764173	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	33764173	33764173	G	A	SNP	PROCR	NM_006404	human	genbank	57_37b	+1	reviewed	silent	c.525	p.R175	0.969	superfamily_MHC antigen-recognition domain	superfamily_MHC antigen-recognition domain	-	no_errors	
RANBP9	10048	genome.wustl.edu	37	6	13632730	13632730	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	13632730	13632730	G	A	SNP	RANBP9	NM_005493	human	genbank	57_37b	-1	reviewed	missense	c.1819	p.R607C	1.000	NULL	HMMPfam_SPRY,HMMSmart_SM00449,HMMSmart_SM00667,HMMPfam_LisH,HMMSmart_SM00668,HMMSmart_SM00757,HMMPfam_RanBPM_CRA	-	no_errors	
RDH5	5959	genome.wustl.edu	37	12	56118211	56118238	+	Frame_Shift_Del	DEL	GCTACAGCCCAGGTTGGGATGCCAAGCT	GCTACAGCCCAGGTTGGGATGCCAAGCT	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	GCTACAGCCCAGGTTGGGATGCCAAGCT	GCTACAGCCCAGGTTGGGATGCCAAGCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	56118211	56118238	GCTACAGCCCAGGTTGGGATGCCAAGCT	-	DEL	RDH5	NM_002905	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.839_866	p.Y281fs	1.000:0.987:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.994:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.986:1.000:1.000:1.000:1.000:1.000:1.000:0.992:1.000	superfamily_NAD(P)-bd	PatternScan_ADH_SHORT,superfamily_NAD(P)-bd,HMMPfam_adh_short	(deletion:cds_exon[56118106,56118329])	no_errors	
REEP1	65055	genome.wustl.edu	37	2	86479180	86479180	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	86479180	86479180	C	A	SNP	REEP1	NM_022912	human	genbank	57_37b	-1	reviewed	missense	c.317	p.C106F	1.000	NULL	HMMPfam_TB2_DP1_HVA22	-	no_errors	
RGS9	8787	genome.wustl.edu	37	17	63200288	63200288	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	63200288	63200288	C	T	SNP	RGS9	NM_003835	human	genbank	57_37b	+1	reviewed	silent	c.1072	p.L358	1.000	superfamily_Regulator of G-protein signaling RGS,HMMPfam_RGS,HMMSmart_SM00315	"superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00049,HMMPfam_DEP,superfamily_Transducin (heterotrimeric G protein) gamma chain,HMMPfam_G-gamma,HMMSmart_SM00224,superfamily_Regulator of G-protein signaling RGS,HMMPfam_RGS,HMMSmart_SM00315"	-	no_errors	
RNF113B	140432	genome.wustl.edu	37	13	98828564	98828564	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	98828564	98828564	C	T	SNP	RNF113B	NM_178861	human	genbank	57_37b	-1	validated	silent	c.927	p.A309	0.000	NULL	superfamily_SSF90229,HMMSmart_ZnF_C3H1,HMMPfam_zf-CCCH,superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1	-	no_errors	
RNF31	55072	genome.wustl.edu	37	14	24617315	24617315	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	24617315	24617315	C	A	SNP	RNF31	NM_017999	human	genbank	57_37b	+1	validated	missense	c.323	p.T108K	1.000	HMMPfam_PUB	HMMPfam_PUB,superfamily_Znf265 first zinc-finger domain,HMMSmart_SM00547,PatternScan_ZF_RANBP2_1,superfamily_NZF domain,HMMPfam_zf-RanBP,superfamily_RING/U-box,HMMSmart_SM00647,PatternScan_ZF_RING_1	-	no_errors	
RPL35	11224	genome.wustl.edu	37	9	127620210	127620210	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	127620210	127620210	G	C	SNP	RPL35	NM_007209	human	genbank	57_37b	-1	reviewed	missense	c.359	p.A120G	1.000	NULL	superfamily_Ribosomal_L29,HMMPfam_Ribosomal_L29,PatternScan_RIBOSOMAL_L29	-	no_errors	
RTN4	57142	genome.wustl.edu	37	2	55253457	55253457	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	55253457	55253457	G	T	SNP	RTN4	NM_020532	human	genbank	57_37b	-1	reviewed	missense	c.1778	p.A593E	0.000	NULL	HMMPfam_Reticulon	-	no_errors	
SAMSN1	64092	genome.wustl.edu	37	21	15872964	15872964	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	15872964	15872964	A	G	SNP	SAMSN1	NM_022136	human	genbank	57_37b	-1	validated	silent	c.654	p.Y218	0.991	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_2	-	no_errors	
SBNO1	55206	genome.wustl.edu	37	12	123794118	123794118	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	123794118	123794118	C	G	SNP	SBNO1	NM_018183	human	genbank	57_37b	-1	validated	missense	c.3452	p.G1151A	1.000	NULL	NULL	-	no_errors	
SCG3	29106	genome.wustl.edu	37	15	51984365	51984365	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	51984365	51984365	G	T	SNP	SCG3	NM_013243	human	genbank	57_37b	+1	reviewed	missense	c.700	p.A234S	0.989	NULL	NULL	-	no_errors	
SCN7A	6332	genome.wustl.edu	37	2	167322362	167322362	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	167322362	167322362	C	T	SNP	SCN7A	NM_002976	human	genbank	57_37b	-1	validated	missense	c.800	p.C267Y	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc	-	no_errors	
SETDB1	9869	genome.wustl.edu	37	1	150916412	150916412	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	150916412	150916412	G	T	SNP	SETDB1	NM_001145415	human	genbank	57_37b	+1	reviewed	missense	c.892	p.D298Y	1.000	HMMSmart_SM00333	HMMSmart_SM00333,HMMPfam_MBD,superfamily_DNA-binding domain,HMMSmart_SM00391,superfamily_SET domain,HMMSmart_SM00468,HMMPfam_Pre-SET,HMMPfam_SET,HMMSmart_SM00317	-	no_errors	
SFPQ	6421	genome.wustl.edu	37	1	35653669	35653670	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	TT	TT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	35653669	35653670	TT	-	DEL	SFPQ	NM_005066	human	genbank	57_37b	-1	validated	frame_shift_del	c.1720_1719	p.E575fs	1.000:0.999	superfamily_RNA-binding domain RBD	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1,HMMPfam_NOPS	(deletion:cds_exon[35653574,35653691])	no_errors	
SFRS4	6429	genome.wustl.edu	37	1	29475392	29475392	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	29475392	29475392	C	T	SNP	SFRS4	NM_005626	human	genbank	57_37b	-1	reviewed	missense	c.1015	p.G339S	0.975	NULL	HMMSmart_RRM,superfamily_SSF54928,HMMPfam_RRM_1	-	no_errors	
SFTA3	253970	genome.wustl.edu	37	14	36960496	36960496	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	36960496	36960496	C	A	SNP	SFTA3	NM_001101341	human	genbank	57_37b	-1	provisional	missense	c.43	p.V15F	0.028	NULL	NULL	-	no_errors	
SGCD	6444	genome.wustl.edu	37	5	156184694	156184694	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	156184694	156184694	A	G	SNP	SGCD	NM_000337	human	genbank	57_37b	+1	reviewed	silent	c.678	p.R226	0.979	HMMPfam_Sarcoglycan_1	HMMPfam_Sarcoglycan_1	-	no_errors	
SIPA1L3	23094	genome.wustl.edu	37	19	38621312	38621312	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	38621312	38621312	G	A	SNP	SIPA1L3	NM_015073	human	genbank	57_37b	+1	validated	missense	c.3043	p.V1015M	0.999	superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	superfamily_SSF111347,HMMPfam_Rap_GAP,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ	-	no_errors	
SLC13A4	26266	genome.wustl.edu	37	7	135380202	135380202	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	135380202	135380202	G	T	SNP	SLC13A4	NM_012450	human	genbank	57_37b	-1	validated	silent	c.930	p.G310	1.000	HMMPfam_Na_sulph_symp	HMMPfam_Na_sulph_symp	-	no_errors	
SLC28A1	9154	genome.wustl.edu	37	15	85438332	85438332	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	85438332	85438332	C	T	SNP	SLC28A1	NM_004213	human	genbank	57_37b	+1	validated	missense	c.439	p.R147C	0.000	NULL	HMMPfam_Nucleos_tra2_N,HMMPfam_Gate,HMMPfam_Nucleos_tra2_C	-	no_errors	
SLC35B2	347734	genome.wustl.edu	37	6	44223091	44223091	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	44223091	44223091	G	C	SNP	SLC35B2	NM_178148	human	genbank	57_37b	-1	validated	silent	c.651	p.A217	1.000	HMMPfam_UAA,superfamily_Multidrug resistance efflux transporter EmrE	HMMPfam_UAA,superfamily_Multidrug resistance efflux transporter EmrE,PatternScan_COPPER_BLUE	-	no_errors	
SLC35B3	51000	genome.wustl.edu	37	6	8417178	8417178	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	8417178	8417178	A	G	SNP	SLC35B3	NM_001142540	human	genbank	57_37b	-1	validated	silent	c.924	p.Y308	1.000	HMMPfam_UAA,superfamily_Multidrug resistance efflux transporter EmrE	HMMPfam_UAA,superfamily_Multidrug resistance efflux transporter EmrE	-	no_errors	
SNX1	6642	genome.wustl.edu	37	15	64428539	64428539	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	64428539	64428539	G	C	SNP	SNX1	NM_003099	human	genbank	57_37b	+1	reviewed	missense	c.1376	p.R459P	0.996	HMMPfam_Vps5	HMMPfam_Sorting_nexin,superfamily_PX domain,HMMPfam_PX,HMMSmart_SM00312,HMMPfam_Vps5	-	no_errors	
SPAG6	9576	genome.wustl.edu	37	10	22675859	22675859	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	22675859	22675859	A	G	SNP	SPAG6	NM_012443	human	genbank	57_37b	+1	reviewed	missense	c.649	p.M217V	1.000	superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185	superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185	-	no_errors	
SPATA21	374955	genome.wustl.edu	37	1	16748558	16748558	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16748558	16748558	G	C	SNP	SPATA21	ENST00000375584	human	ensembl	57_37b	-1	known	missense	c.621	p.I207M	0.000	NULL	NULL	-	no_errors	
SRRM2	23524	genome.wustl.edu	37	16	2817240	2817240	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2817240	2817240	G	A	SNP	SRRM2	NM_016333	human	genbank	57_37b	+1	validated	silent	c.6711	p.A2237	1.000	NULL	HMMPfam_cwf21	-	no_errors	
SSC5D	284297	genome.wustl.edu	37	19	56024423	56024423	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	56024423	56024423	C	A	SNP	SSC5D	NM_001144950	human	genbank	57_37b	+1	provisional	nonsense	c.2831	p.S944*	0.000	NULL	superfamily_SRCR-like,HMMSmart_SM00202,HMMPfam_SRCR,PatternScan_SRCR_1	-	no_errors	
SSPO	23145	genome.wustl.edu	37	7	149477134	149477134	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149477134	149477134	G	T	SNP	SSPO	ENST00000378016	human	ensembl	57_37b	+1	known	missense	c.1311	p.Q437H	0.980	HMMPfam_C8	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_VWC,HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_BPTI_KUNITZ_1,PatternScan_GLYCO_HORMONE_BETA_1,PatternScan_EGF_1,PatternScan_VWFC_1	-	no_errors	
STEAP1	26872	genome.wustl.edu	37	7	89789083	89789083	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	89789083	89789083	C	T	SNP	STEAP1	ENST00000433102	human	ensembl	57_37b	+1	known	missense	c.422	p.P141L	0.008	NULL	HMMPfam_Ferric_reduct	-	no_errors	
STRA6	64220	genome.wustl.edu	37	15	74476323	74476323	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	74476323	74476323	G	A	SNP	STRA6	NM_001142617	human	genbank	57_37b	-1	reviewed	missense	c.1174	p.L392F	0.990	NULL	NULL	-	no_errors	
T	6862	genome.wustl.edu	37	6	166571853	166571853	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	166571853	166571853	G	C	SNP	T	NM_003181	human	genbank	57_37b	-1	reviewed	missense	c.1258	p.Q420E	0.990	NULL	HMMSmart_TBOX,superfamily_P53_like_DNA_bnd,HMMPfam_T-box,PatternScan_TBOX_1,PatternScan_TBOX_2	-	no_errors	
TACR1	6869	genome.wustl.edu	37	2	75425803	75425803	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	75425803	75425803	T	A	SNP	TACR1	NM_001058	human	genbank	57_37b	-1	reviewed	silent	c.258	p.T86	0.001	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
TANC1	85461	genome.wustl.edu	37	2	160086123	160086123	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	160086123	160086123	G	C	SNP	TANC1	NM_033394	human	genbank	57_37b	+1	validated	missense	c.4186	p.A1396P	1.000	superfamily_TPR-like,HMMPfam_TPR_2,HMMSmart_SM00028	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00248,HMMPfam_Ank,superfamily_Ankyrin repeat,HMMSmart_SM00028,superfamily_TPR-like,HMMPfam_TPR_1,HMMPfam_TPR_2	-	no_errors	
TBC1D25	4943	genome.wustl.edu	37	X	48418756	48418756	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	48418756	48418756	A	C	SNP	TBC1D25	NM_002536	human	genbank	57_37b	+1	validated	missense	c.1460	p.H487P	0.418	superfamily_Ypt/Rab-GAP domain of gyp1p	superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	-	no_errors	
TBX20	57057	genome.wustl.edu	37	7	35242302	35242302	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	35242302	35242302	G	T	SNP	TBX20	NM_001077653	human	genbank	57_37b	-1	reviewed	missense	c.1084	p.P362T	1.000	NULL	superfamily_P53_like_DNA_bnd,HMMSmart_TBOX,HMMPfam_T-box,PatternScan_TBOX_1,PatternScan_TBOX_2	-	no_errors	
TBXAS1	6916	genome.wustl.edu	37	7	139661880	139661880	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	139661880	139661880	G	C	SNP	TBXAS1	NM_001061	human	genbank	57_37b	+1	reviewed	missense	c.985	p.V329L	0.182	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors	
TMED8	283578	genome.wustl.edu	37	14	77808211	77808211	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	77808211	77808211	T	C	SNP	TMED8	NM_213601	human	genbank	57_37b	-1	provisional	missense	c.881	p.D294G	1.000	superfamily_SSF101576	superfamily_SSF101576	-	no_errors	
TNFAIP2	7127	genome.wustl.edu	37	14	103601617	103601617	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	103601617	103601617	C	T	SNP	TNFAIP2	NM_006291	human	genbank	57_37b	+1	reviewed	missense	c.1885	p.R629C	0.234	HMMPfam_Sec6	HMMPfam_Sec6	-	no_errors	
TNFRSF11B	4982	genome.wustl.edu	37	8	119938847	119938847	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	119938847	119938847	C	A	SNP	TNFRSF11B	NM_002546	human	genbank	57_37b	-1	reviewed	nonsense	c.703	p.E235*	0.843	superfamily_DEATH domain	HMMSmart_SM00208,superfamily_TNF receptor-like,HMMPfam_TNFR_c6,PatternScan_TNFR_NGFR_1,superfamily_DEATH domain,HMMSmart_SM00005,HMMPfam_Death	-	no_errors	
TNKS1BP1	85456	genome.wustl.edu	37	11	57080433	57080433	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	57080433	57080433	C	A	SNP	TNKS1BP1	NM_033396	human	genbank	57_37b	-1	validated	missense	c.1729	p.G577C	0.001	NULL	NULL	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7578190	7578190	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578190	7578190	T	C	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.659	p.Y220C	0.998	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TSPAN10	83882	genome.wustl.edu	37	17	79612476	79612476	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79612476	79612476	C	T	SNP	TSPAN10	ENST00000328585	human	ensembl	57_37b	+1	known	silent	c.495	p.A165	0.002	HMMPfam_Tetraspannin	HMMPfam_Tetraspannin,PatternScan_TM4_1,superfamily_Tetraspanin	-	no_errors	
TSPYL1	7259	genome.wustl.edu	37	6	116599945	116599945	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	116599945	116599945	G	C	SNP	TSPYL1	NM_003309	human	genbank	57_37b	-1	reviewed	missense	c.1049	p.S350C	1.000	HMMPfam_NAP	HMMPfam_NAP	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179558410	179558410	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179558410	179558410	T	A	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.27788	p.E9263V	0.998	HMMPfam_PPAK	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors	
TUFM	7284	genome.wustl.edu	37	16	28854300	28854300	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	28854300	28854300	C	T	SNP	TUFM	NM_003321	human	genbank	57_37b	-1	reviewed	missense	c.1364	p.G455D	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_GTP_EFTU,PatternScan_EFACTOR_GTP,superfamily_Translation proteins,HMMPfam_GTP_EFTU_D2,HMMPfam_GTP_EFTU_D3,superfamily_EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	-	no_errors	
UNC5C	8633	genome.wustl.edu	37	4	96199426	96199426	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	96199426	96199426	C	G	SNP	UNC5C	NM_003728	human	genbank	57_37b	-1	reviewed	missense	c.578	p.G193A	1.000	HMMPfam_I-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_ZU5,HMMSmart_SM00218,superfamily_DEATH domain,HMMSmart_SM00005,HMMPfam_Death	-	no_errors	
UQCRC1	7384	genome.wustl.edu	37	3	48638832	48638852	+	In_Frame_Del	DEL	CTGCATATGTCCATGGGATGC	CTGCATATGTCCATGGGATGC	-	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	CTGCATATGTCCATGGGATGC	CTGCATATGTCCATGGGATGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	48638832	48638852	CTGCATATGTCCATGGGATGC	-	DEL	UQCRC1	NM_003365	human	genbank	57_37b	-1	validated	in_frame_del	c.775_755	p.GIPWTYA252in_frame_del	0.979:0.011:0.008:0.007:0.066:0.960:0.956:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.524:0.200:0.066:0.099:0.000:0.001:0.175	superfamily_LuxS/MPP-like metallohydrolase,HMMPfam_Peptidase_M16_C	superfamily_LuxS/MPP-like metallohydrolase,HMMPfam_Peptidase_M16,HMMPfam_Peptidase_M16_C	(deletion:cds_exon[48638785,48638900])	no_errors	
URGCP	0	genome.wustl.edu	37	7	43918056	43918056	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	43918056	43918056	T	A	SNP	URGCP	NM_001077663	human	genbank	57_37b	-1	validated	missense	c.1006	p.N336Y	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
VPS13D	55187	genome.wustl.edu	37	1	12343711	12343711	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	12343711	12343711	T	C	SNP	VPS13D	NM_015378	human	genbank	57_37b	+1	reviewed	missense	c.5552	p.I1851T	0.000	NULL	superfamily_UBA-like,HMMPfam_UBA,HMMSmart_SM00165,HMMPfam_DUF1162	-	no_errors	
WDR45L	56270	genome.wustl.edu	37	17	80574405	80574405	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	80574405	80574405	A	C	SNP	WDR45L	NM_019613	human	genbank	57_37b	-1	reviewed	missense	c.923	p.V308G	1.000	superfamily_WD40 repeat-like	superfamily_WD40 repeat-like,HMMSmart_SM00320	-	no_errors	
WDR7	23335	genome.wustl.edu	37	18	54444046	54444046	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	54444046	54444046	C	G	SNP	WDR7	NM_015285	human	genbank	57_37b	+1	reviewed	missense	c.2882	p.A961G	1.000	NULL	HMMSmart_SM00320,HMMPfam_WD40,superfamily_Prolyl oligopeptidase N-terminal domain,PatternScan_WD_REPEATS_1,superfamily_WD40 repeat-like	-	no_errors	
ZBTB41	360023	genome.wustl.edu	37	1	197128698	197128698	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	197128698	197128698	G	C	SNP	ZBTB41	NM_194314	human	genbank	57_37b	-1	validated	missense	c.2521	p.P841A	0.001	NULL	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
ZDHHC17	23390	genome.wustl.edu	37	12	77236736	77236736	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	77236736	77236736	T	A	SNP	ZDHHC17	NM_015336	human	genbank	57_37b	+1	validated	missense	c.1304	p.L435H	1.000	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,HMMPfam_zf-DHHC	-	no_errors	
ZDHHC5	25921	genome.wustl.edu	37	11	57466569	57466569	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	57466569	57466569	C	G	SNP	ZDHHC5	NM_015457	human	genbank	57_37b	+1	validated	nonsense	c.1661	p.S554*	1.000	NULL	HMMPfam_zf-DHHC	-	no_errors	
ZNF268	10795	genome.wustl.edu	37	12	133779830	133779830	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	133779830	133779830	A	G	SNP	ZNF268	NM_003415	human	genbank	57_37b	+1	validated	missense	c.1558	p.R520G	0.038	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF410	57862	genome.wustl.edu	37	14	74371680	74371680	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	74371680	74371680	C	T	SNP	ZNF410	ENST00000398139	human	ensembl	57_37b	+1	known	missense	c.778	p.H260Y	1.000	NULL	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF528	84436	genome.wustl.edu	37	19	52919021	52919021	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52919021	52919021	T	G	SNP	ZNF528	NM_032423	human	genbank	57_37b	+1	validated	missense	c.916	p.F306V	0.279	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF780A	284323	genome.wustl.edu	37	19	40587737	40587737	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A1-A0SO-01A-22D-A099-09	TCGA-A1-A0SO-10A-03D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	40587737	40587737	C	A	SNP	ZNF780A	NM_001142577	human	genbank	57_37b	-1	validated	missense	c.224	p.R75I	0.001	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
