Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABCB1	5243	genome.wustl.edu	37	7	87135240	87135240	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	87135240	87135240	C	T	SNP	ABCB1	NM_000927	human	genbank	57_37b	-1	reviewed	silent	c.3609	p.T1203	0.799	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ABCF1	23	genome.wustl.edu	37	6	30558385	30558385	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	30558385	30558385	G	C	SNP	ABCF1	NM_001025091	human	genbank	57_37b	+1	reviewed	missense	c.2445	p.Q815H	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ADCY7	113	genome.wustl.edu	37	16	50324435	50324435	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	50324435	50324435	C	G	SNP	ADCY7	NM_001114	human	genbank	57_37b	+1	reviewed	missense	c.239	p.S80C	0.985	NULL	HMMSmart_CYCc,superfamily_A/G_cyclase,HMMPfam_Guanylate_cyc,HMMPfam_DUF1053,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors	
ALDH1L2	160428	genome.wustl.edu	37	12	105456678	105456678	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	105456678	105456678	G	A	SNP	ALDH1L2	NM_001034173	human	genbank	57_37b	-1	reviewed	silent	c.909	p.N303	1.000	superfamily_FMT C-terminal domain-like,HMMPfam_Formyl_trans_C	HMMPfam_Formyl_trans_N,superfamily_Formyltransferase,PatternScan_GART,superfamily_FMT C-terminal domain-like,HMMPfam_Formyl_trans_C,PatternScan_PHOSPHOPANTETHEINE,superfamily_ALDH-like,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_GLU,PatternScan_ALDEHYDE_DEHYDR_CYS	-	no_errors	
ANK2	287	genome.wustl.edu	37	4	114238897	114238897	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	114238897	114238897	C	G	SNP	ANK2	NM_001148	human	genbank	57_37b	+1	reviewed	missense	c.2728	p.L910V	1.000	NULL	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,HMMPfam_ZU5,PatternScan_ALDEHYDE_DEHYDR_GLU,superfamily_DEATH_like,HMMSmart_DEATH,HMMPfam_Death	-	no_errors	
ASPM	259266	genome.wustl.edu	37	1	197111819	197111819	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	197111819	197111819	G	T	SNP	ASPM	NM_018136	human	genbank	57_37b	-1	reviewed	silent	c.1563	p.L521	0.805	NULL	superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00033,HMMPfam_CH,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00015,HMMPfam_IQ	-	no_errors	
ATAD2	29028	genome.wustl.edu	37	8	124340530	124340530	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	124340530	124340530	C	T	SNP	ATAD2	NM_014109	human	genbank	57_37b	-1	reviewed	silent	c.3768	p.R1256	0.000	NULL	HMMPfam_YL1,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain	-	no_errors	
AZI1	22994	genome.wustl.edu	37	17	79182778	79182778	+	Silent	SNP	T	T	C	rs62075318	byCluster;by1000genomes	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	79182778	79182778	T	C	SNP	AZI1	NM_014984	human	genbank	57_37b	-1	validated	silent	c.222	p.R74	0.397	NULL	NULL	-		
BTNL3	10917	genome.wustl.edu	37	5	180420100	180420100	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	180420100	180420100	G	A	SNP	BTNL3	NM_197975	human	genbank	57_37b	+1	validated	missense	c.337	p.G113R	0.000	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IG	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IG,HMMSmart_PRY,HMMPfam_SPRY,HMMSmart_SPRY	-	no_errors	
C20orf46	55321	genome.wustl.edu	37	20	1161624	1161624	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	1161624	1161624	G	A	SNP	C20orf46	NM_018354	human	genbank	57_37b	-1	provisional	silent	c.639	p.G213	1.000	NULL	NULL	-	no_errors	
C3orf34	84984	genome.wustl.edu	37	3	196434580	196434580	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	196434580	196434580	C	A	SNP	C3orf34	NM_032898	human	genbank	57_37b	-1	validated	nonsense	c.346	p.E116*	1.000	NULL	NULL	-	no_errors	
C4orf40	401137	genome.wustl.edu	37	4	71021774	71021774	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	71021774	71021774	C	T	SNP	C4orf40	NM_214711	human	genbank	57_37b	+1	validated	missense	c.55	p.R19W	0.004	NULL	NULL	-	no_errors	
CCDC40	55036	genome.wustl.edu	37	17	78055837	78055837	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	78055837	78055837	C	A	SNP	CCDC40	NM_017950	human	genbank	57_37b	+1	validated	missense	c.1969	p.Q657K	0.997	NULL	HMMPfam_BRE1	-	no_errors	
CDH2	1000	genome.wustl.edu	37	18	25565518	25565518	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	25565518	25565518	C	G	SNP	CDH2	NM_001792	human	genbank	57_37b	-1	reviewed	missense	c.1949	p.R650T	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_pro,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
CDYL	9425	genome.wustl.edu	37	6	4943943	4943943	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	4943943	4943943	G	A	SNP	CDYL	NM_004824	human	genbank	57_37b	+1	reviewed	missense	c.1285	p.D429N	1.000	superfamily_SSF52096,HMMPfam_ECH	superfamily_Chromodomain-like,HMMSmart_CHROMO,HMMPfam_Chromo,PatternScan_CHROMO_1,superfamily_SSF52096,HMMPfam_ECH	-	no_errors	
CLASP2	23122	genome.wustl.edu	37	3	33644558	33644558	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	33644558	33644558	C	T	SNP	CLASP2	NM_015097	human	genbank	57_37b	-1	validated	missense	c.1810	p.D604N	1.000	NULL	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors	
CNGA3	1261	genome.wustl.edu	37	2	99013495	99013495	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	99013495	99013495	C	T	SNP	CNGA3	NM_001298	human	genbank	57_37b	+1	reviewed	missense	c.1862	p.A621V	0.088	NULL	superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1,PatternScan_CNMP_BINDING_2	-	no_errors	
CROCCL1	84809	genome.wustl.edu	37	1	16945027	16945027	+	RNA	SNP	T	C	C	rs1050322	byCluster;byFrequency;by2Hit2Allele;byHapMap	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16945027	16945027	T	C	SNP	CROCCL1	NR_026752	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.007	-	-	-		
CYP2S1	29785	genome.wustl.edu	37	19	41703775	41703775	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	41703775	41703775	C	T	SNP	CYP2S1	NM_030622	human	genbank	57_37b	+1	reviewed	silent	c.435	p.G145	0.090	HMMPfam_p450,superfamily_Cytochrome P450	HMMPfam_p450,superfamily_Cytochrome P450,PatternScan_CYTOCHROME_P450	-	no_errors	
DDX11L8	0	genome.wustl.edu	37	12	9453797	9453797	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	9453797	9453797	C	A	SNP	DDX11L8	ENST00000341155	human	ensembl	57_37b	+1	known	silent	c.1203	p.I401	0.525	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00488,HMMPfam_DEAD_2	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00488,HMMPfam_DEAD_2,HMMSmart_SM00491	-	no_errors	
EFCAB5	374786	genome.wustl.edu	37	17	28380797	28380797	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	28380797	28380797	C	T	SNP	EFCAB5	NM_198529	human	genbank	57_37b	+1	validated	missense	c.1825	p.R609C	0.000	superfamily_EF-hand	superfamily_EF-hand,PatternScan_EF_HAND_1	-	no_errors	
EML3	256364	genome.wustl.edu	37	11	62378798	62378799	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	62378798	62378799	-	C	INS	EML3	NM_153265	human	genbank	57_37b	-1	validated	frame_shift_ins	c.213_212	p.L72fs	0.990:1.000	NULL	HMMPfam_HELP,HMMSmart_SM00320,HMMPfam_WD40,superfamily_WD40 repeat-like	-	no_errors	
ENSG00000247257	0	genome.wustl.edu	37	7	138731999	138731999	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	138731999	138731999	C	T	SNP	ENSG00000247257	ENST00000433128	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	
EXT1	2131	genome.wustl.edu	37	8	119122505	119122505	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	119122505	119122505	T	C	SNP	EXT1	NM_000127	human	genbank	57_37b	-1	reviewed	missense	c.781	p.K261E	1.000	HMMPfam_Exostosin	HMMPfam_Exostosin,superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glyco_transf_64	-	no_errors	
FBXO22	26263	genome.wustl.edu	37	15	76196845	76196845	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	76196845	76196845	T	C	SNP	FBXO22	NM_147188	human	genbank	57_37b	+1	reviewed	missense	c.154	p.W52R	0.992	HMMPfam_F-box,superfamily_F-box domain	HMMPfam_F-box,superfamily_F-box domain,HMMPfam_FIST_C	-	no_errors	
FLNB	2317	genome.wustl.edu	37	3	58135903	58135904	+	In_Frame_Ins	INS	-	-	CGT	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	58135903	58135904	-	CGT	INS	FLNB	NM_001457	human	genbank	57_37b	+1	reviewed	in_frame_ins	c.6316_6317	p.2108in_frame_insS	1.000:1.000	HMMSmart_IG_FLMN,superfamily_Ig_E-set	superfamily_Calponin-homology,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_CH,PatternScan_ACTININ_2,superfamily_Ig_E-set,HMMPfam_Filamin,HMMSmart_IG_FLMN	-	no_errors	
FRMD4A	55691	genome.wustl.edu	37	10	13782556	13782556	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	13782556	13782556	G	A	SNP	FRMD4A	NM_018027	human	genbank	57_37b	-1	validated	silent	c.570	p.H190	1.000	HMMSmart_B41,superfamily_FERM_3-hlx,HMMPfam_FERM_M	superfamily_SSF54236,HMMSmart_B41,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_FERM_3-hlx,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_SSF50729,HMMPfam_FERM_C	-	no_errors	
FRMPD3	84443	genome.wustl.edu	37	X	106844028	106844028	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	106844028	106844028	C	-	DEL	FRMPD3	XM_042978	human	genbank	57_37b	+1	model	frame_shift_del	c.2858	p.L954fs	0.903	NULL	PatternScan_FERM_1,PatternScan_FERM_2,superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,HMMSmart_B41,superfamily_FERM_3-hlx,HMMPfam_FERM_M	(deletion:cds_exon[106843533,106846603])	no_errors	
FRYL	285527	genome.wustl.edu	37	4	48636482	48636482	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	48636482	48636482	A	G	SNP	FRYL	ENST00000302806	human	ensembl	57_37b	-1	known	silent	c.99	p.N33	1.000	NULL	NULL	-	no_errors	
GPR97	222487	genome.wustl.edu	37	16	57714456	57714456	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	57714456	57714456	C	T	SNP	GPR97	NM_170776	human	genbank	57_37b	+1	validated	missense	c.808	p.R270C	0.144	HMMPfam_7tm_2	PatternScan_G_PROTEIN_RECEP_F2_1,PatternScan_G_PROTEIN_RECEP_F2_2,HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2	-	no_errors	
GRK4	2868	genome.wustl.edu	37	4	3039136	3039136	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	3039136	3039136	C	G	SNP	GRK4	NM_182982	human	genbank	57_37b	+1	reviewed	missense	c.1443	p.I481M	0.198	HMMSmart_SM00133	superfamily_Regulator of G-protein signaling RGS,HMMPfam_RGS,HMMSmart_SM00315,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00133	-	no_errors	
HCN4	10021	genome.wustl.edu	37	15	73621931	73621931	+	Missense_Mutation	SNP	G	A	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	73621931	73621931	G	A	SNP	HCN4	NM_005477	human	genbank	57_37b	-1	reviewed	missense	c.1573	p.R525C	1.000	superfamily_SSF81324,superfamily_cNMP_binding	PatternScan_CNMP_BINDING_2,HMMPfam_Ion_trans_N,superfamily_SSF81324,HMMPfam_Ion_trans,superfamily_cNMP_binding,HMMSmart_cNMP,HMMPfam_cNMP_binding,PatternScan_CNMP_BINDING_1	-	no_errors	
HIST1H2AK	8330	genome.wustl.edu	37	6	27806113	27806113	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	27806113	27806113	G	A	SNP	HIST1H2AK	NM_003510	human	genbank	57_37b	-1	reviewed	missense	c.5	p.S2L	0.992	superfamily_Histone-fold	superfamily_Histone-fold,HMMSmart_SM00414,HMMPfam_Histone,PatternScan_HISTONE_H2A	-	no_errors	
IL17RC	84818	genome.wustl.edu	37	3	9974335	9974335	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	9974335	9974335	C	T	SNP	IL17RC	NM_153461	human	genbank	57_37b	+1	reviewed	silent	c.1644	p.L548	0.016	NULL	HMMPfam_SEFIR	-	no_errors	
INPP5F	22876	genome.wustl.edu	37	10	121583335	121583335	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	121583335	121583335	C	T	SNP	INPP5F	NM_014937	human	genbank	57_37b	+1	reviewed	nonsense	c.2170	p.Q724*	1.000	NULL	HMMPfam_Syja_N	-	no_errors	
ITK	3702	genome.wustl.edu	37	5	156638350	156638350	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	156638350	156638350	G	A	SNP	ITK	NM_005546	human	genbank	57_37b	+1	reviewed	missense	c.296	p.R99Q	1.000	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00107,HMMPfam_BTK,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
KIAA1468	57614	genome.wustl.edu	37	18	59854856	59854856	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	59854856	59854856	C	A	SNP	KIAA1468	NM_020854	human	genbank	57_37b	+1	validated	silent	c.118	p.R40	0.998	NULL	HMMSmart_SM00667,superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors	
KIF11	3832	genome.wustl.edu	37	10	94393475	94393475	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	94393475	94393475	G	T	SNP	KIF11	NM_004523	human	genbank	57_37b	+1	reviewed	missense	c.1798	p.V600F	0.331	NULL	superfamily_SSF52540,HMMSmart_KISc,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors	
KRT1	3848	genome.wustl.edu	37	12	53069105	53069105	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	53069105	53069105	C	T	SNP	KRT1	NM_006121	human	genbank	57_37b	-1	reviewed	missense	c.1807	p.G603S	0.008	NULL	HMMPfam_Filament,superfamily_Prefoldin,PatternScan_IF	-	no_errors	
LARS	51520	genome.wustl.edu	37	5	145537087	145537087	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	145537087	145537087	C	T	SNP	LARS	NM_020117	human	genbank	57_37b	-1	reviewed	missense	c.944	p.G315E	0.995	superfamily_Nucleotidylyl transferase,superfamily_ValRS/IleRS/LeuRS editing domain	superfamily_Nucleotidylyl transferase,PatternScan_AA_TRNA_LIGASE_I,superfamily_ValRS/IleRS/LeuRS editing domain,HMMPfam_tRNA-synt_1g,superfamily_Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases,HMMPfam_Anticodon_1	-	no_errors	
LOC100287115	0	genome.wustl.edu	37	15	60298165	60298165	+	Silent	SNP	C	T	T	rs72739945	byCluster;by1000genomes	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	60298165	60298165	C	T	SNP	LOC100287115	XM_002343348	human	genbank	57_37b	-1	model	silent	c.78	p.T26	0.000	NULL	NULL	-		
LOC100287127	0	genome.wustl.edu	37	11	47603972	47603972	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	47603972	47603972	C	T	SNP	LOC100287127	XM_002343059	human	genbank	57_37b	-1	model	missense	c.236	p.R79Q	0.998	NULL	NULL	-	no_errors	
LOC100287198	0	genome.wustl.edu	37	7	99764898	99764898	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	99764898	99764898	T	C	SNP	LOC100287198	XM_002342774	human	genbank	57_37b	+1	model	missense	c.553	p.C185R	1.000	NULL	NULL	-	no_errors	
LOC100287484	0	genome.wustl.edu	37	11	49878979	49878979	+	Missense_Mutation	SNP	G	A	A	rs7482269	byCluster;byFrequency;by2Hit2Allele	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	49878979	49878979	G	A	SNP	LOC100287484	XM_002343064	human	genbank	57_37b	+1	model	missense	c.1210	p.A404T	0.000	NULL	NULL	-		
LOC100289173	0	genome.wustl.edu	37	6	12514663	12514663	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	12514663	12514663	C	T	SNP	LOC100289173	XM_002342615	human	genbank	57_37b	-1	model	silent	c.213	p.A71	1.000	NULL	NULL	-	no_errors	
LOC100290951	0	genome.wustl.edu	37	2	47093923	47093923	+	Missense_Mutation	SNP	A	G	G	rs10177751	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	47093923	47093923	A	G	SNP	LOC100290951	XM_002346460	human	genbank	57_37b	-1	model	missense	c.803	p.V268A	0.000	NULL	NULL	-		
LOC392264	392264	genome.wustl.edu	37	8	120492271	120492271	+	RNA	SNP	C	C	A	rs113201173	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	120492271	120492271	C	A	SNP	LOC392264	XR_016686	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.165	-	-	-		
LRRIQ3	127255	genome.wustl.edu	37	1	74507579	74507579	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	74507579	74507579	C	A	SNP	LRRIQ3	NM_001105659	human	genbank	57_37b	-1	provisional	missense	c.1036	p.D346Y	0.013	NULL	superfamily_Outer arm dynein light chain 1,HMMPfam_LRR_1	-	no_errors	
LTBP2	4053	genome.wustl.edu	37	14	74972768	74972768	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	74972768	74972768	C	T	SNP	LTBP2	NM_000428	human	genbank	57_37b	-1	reviewed	missense	c.4160	p.R1387H	0.994	superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,HMMPfam_EGF,superfamily_Growth factor receptor domain	-	no_errors	
LYN	4067	genome.wustl.edu	37	8	56864664	56864664	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	56864664	56864664	A	T	SNP	LYN	NM_002350	human	genbank	57_37b	+1	validated	missense	c.627	p.K209N	0.913	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
LYST	1130	genome.wustl.edu	37	1	235969153	235969153	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	235969153	235969153	C	T	SNP	LYST	NM_000081	human	genbank	57_37b	-1	reviewed	missense	c.3283	p.E1095K	0.998	NULL	PatternScan_COPPER_BLUE,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
MCRS1	10445	genome.wustl.edu	37	12	49953743	49953743	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	49953743	49953743	G	C	SNP	MCRS1	NM_001012300	human	genbank	57_37b	-1	validated	missense	c.928	p.R310G	1.000	NULL	superfamily_SMAD_FHA,HMMSmart_FHA,HMMPfam_FHA	-	no_errors	
MLL2	8085	genome.wustl.edu	37	12	49427728	49427728	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	49427728	49427728	T	A	SNP	MLL2	NM_003482	human	genbank	57_37b	-1	validated	missense	c.10760	p.E3587V	1.000	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMSmart_SM00184,PatternScan_ZF_PHD_1,HMMPfam_PHD,PatternScan_RECOMBINASES_2,HMMSmart_SM00398,superfamily_HMG-box,HMMPfam_HMG_box,HMMPfam_FYRN,HMMSmart_SM00541,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors	
MYH10	4628	genome.wustl.edu	37	17	8384646	8384646	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	8384646	8384646	G	A	SNP	MYH10	NM_005964	human	genbank	57_37b	-1	validated	missense	c.5165	p.S1722F	1.000	HMMPfam_Myosin_tail_1,superfamily_Prefoldin	superfamily_Myosin S1 fragment N-terminal domain,HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,superfamily_Prefoldin,HMMPfam_Myosin_tail_1	-	no_errors	
MYH10	4628	genome.wustl.edu	37	17	8424562	8424562	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	8424562	8424562	C	T	SNP	MYH10	NM_005964	human	genbank	57_37b	-1	validated	missense	c.1906	p.E636K	1.000	HMMPfam_Myosin_head,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_IQ,HMMSmart_SM00015,HMMPfam_Myosin_head,HMMSmart_SM00242,HMMPfam_Myosin_tail_1,HMMPfam_Myosin_N,superfamily_Myosin S1 fragment N-terminal domain,superfamily_Prefoldin,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
MYH11	4629	genome.wustl.edu	37	16	15818522	15818522	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	15818522	15818522	G	C	SNP	MYH11	NM_001040114	human	genbank	57_37b	-1	reviewed	missense	c.4119	p.I1373M	1.000	HMMPfam_Myosin_tail_1	HMMPfam_Myosin_N,superfamily_SSF52540,HMMSmart_MYSc,HMMPfam_Myosin_head,HMMSmart_IQ,HMMPfam_IQ,HMMPfam_Myosin_tail_1	-	no_errors	
MYH6	4624	genome.wustl.edu	37	14	23874854	23874854	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23874854	23874854	G	A	SNP	MYH6	NM_002471	human	genbank	57_37b	-1	validated	silent	c.327	p.Y109	0.996	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,superfamily_Prefoldin,HMMPfam_Myosin_tail_1	-	no_errors	
NUDT5	11164	genome.wustl.edu	37	10	12215795	12215795	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	12215795	12215795	C	T	SNP	NUDT5	NM_014142	human	genbank	57_37b	-1	validated	missense	c.307	p.E103K	0.998	superfamily_Nudix,HMMPfam_NUDIX,PatternScan_NUDIX	superfamily_Nudix,HMMPfam_NUDIX,PatternScan_NUDIX	-	no_errors	
NXN	64359	genome.wustl.edu	37	17	729229	729229	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	729229	729229	C	T	SNP	NXN	NM_022463	human	genbank	57_37b	-1	validated	silent	c.450	p.G150	0.961	superfamily_Thioredoxin-like	superfamily_Thioredoxin-like,HMMPfam_AhpC-TSA	-	no_errors	
OR10A6	390093	genome.wustl.edu	37	11	7949711	7949711	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	7949711	7949711	G	A	SNP	OR10A6	NM_001004461	human	genbank	57_37b	-1	provisional	missense	c.499	p.P167S	0.457	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR2Z1	284383	genome.wustl.edu	37	19	8841768	8841768	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	8841768	8841768	G	T	SNP	OR2Z1	NM_001004699	human	genbank	57_37b	+1	provisional	silent	c.378	p.V126	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
PCDHA4	56144	genome.wustl.edu	37	5	140188814	140188814	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140188814	140188814	G	A	SNP	PCDHA4	NM_018907	human	genbank	57_37b	+1	reviewed	missense	c.2042	p.R681Q	0.016	NULL	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHGB4	8641	genome.wustl.edu	37	5	140768708	140768708	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140768708	140768708	C	T	SNP	PCDHGB4	NM_003736	human	genbank	57_37b	+1	reviewed	silent	c.1257	p.T419	0.002	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PKHD1L1	93035	genome.wustl.edu	37	8	110499005	110499005	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	110499005	110499005	C	T	SNP	PKHD1L1	NM_177531	human	genbank	57_37b	+1	validated	missense	c.9835	p.R3279C	1.000	superfamily_Pectin lyase-like	superfamily_E set domains,HMMSmart_SM00429,HMMPfam_TIG,HMMSmart_SM00758,superfamily_Anthrax protective antigen,HMMSmart_SM00710,superfamily_Cupredoxins,HMMPfam_G8,superfamily_Pectin lyase-like	-	no_errors	
RCBTB2	1102	genome.wustl.edu	37	13	49075943	49075943	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	49075943	49075943	A	T	SNP	RCBTB2	NM_001268	human	genbank	57_37b	-1	reviewed	silent	c.1179	p.T393	0.682	superfamily_POZ domain,HMMPfam_BTB	superfamily_RCC1/BLIP-II,HMMPfam_RCC1,PatternScan_RCC1_2,superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225	-	no_errors	
SERPINA10	51156	genome.wustl.edu	37	14	94756847	94756847	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	94756847	94756847	C	T	SNP	SERPINA10	NM_001100607	human	genbank	57_37b	-1	validated	silent	c.84	p.S28	0.000	superfamily_Prot_inh_serpin	PatternScan_SERPIN,superfamily_Prot_inh_serpin,HMMPfam_Serpin,HMMSmart_SERPIN	-	no_errors	
SETX	23064	genome.wustl.edu	37	9	135140193	135140195	+	In_Frame_Del	DEL	ACC	ACC	-	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	ACC	ACC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	135140193	135140195	ACC	-	DEL	SETX	NM_015046	human	genbank	57_37b	-1	reviewed	in_frame_del	c.7467_7465	p.G2489in_frame_del	0.051:0.066:0.043	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	(deletion:cds_exon[135139626,135140372])	no_errors	
SIPA1L2	57568	genome.wustl.edu	37	1	232561348	232561348	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	232561348	232561348	C	T	SNP	SIPA1L2	NM_020808	human	genbank	57_37b	-1	validated	missense	c.4617	p.M1539I	1.000	NULL	superfamily_Rap/Ran-GAP (Pfam 02145),HMMPfam_Rap_GAP,superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	-	no_errors	
SLC25A13	10165	genome.wustl.edu	37	7	95822392	95822392	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	95822392	95822392	C	T	SNP	SLC25A13	NM_014251	human	genbank	57_37b	-1	reviewed	missense	c.572	p.R191H	1.000	superfamily_SSF47473	PatternScan_EF_HAND_1,superfamily_SSF47473,HMMSmart_EFh,superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors	
SLC2A1	6513	genome.wustl.edu	37	1	43393369	43393369	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	43393369	43393369	G	A	SNP	SLC2A1	NM_006516	human	genbank	57_37b	-1	reviewed	silent	c.1185	p.F395	1.000	superfamily_MFS_gen_substrate_transporter,HMMPfam_Sugar_tr	superfamily_MFS_gen_substrate_transporter,HMMPfam_Sugar_tr,PatternScan_SUGAR_TRANSPORT_2,PatternScan_SUGAR_TRANSPORT_1	-	no_errors	
ST6GALNAC1	55808	genome.wustl.edu	37	17	74623542	74623542	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	74623542	74623542	C	G	SNP	ST6GALNAC1	NM_018414	human	genbank	57_37b	-1	validated	missense	c.955	p.E319Q	1.000	HMMPfam_Glyco_transf_29	HMMPfam_Glyco_transf_29	-	no_errors	
STX10	8677	genome.wustl.edu	37	19	13260551	13260551	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	13260551	13260551	C	A	SNP	STX10	NM_003765	human	genbank	57_37b	-1	provisional	nonsense	c.196	p.E66*	1.000	superfamily_t-snare proteins,HMMPfam_Syntaxin-6_N	superfamily_t-snare proteins,HMMPfam_Syntaxin-6_N,HMMSmart_SM00397,HMMPfam_SNARE,PatternScan_SYNTAXIN	-	no_errors	
SYCP2	10388	genome.wustl.edu	37	20	58467646	58467646	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	58467646	58467646	G	A	SNP	SYCP2	NM_014258	human	genbank	57_37b	-1	reviewed	missense	c.1904	p.S635L	0.024	NULL	NULL	-	no_errors	
TAP1	6890	genome.wustl.edu	37	6	32813449	32813449	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32813449	32813449	G	A	SNP	TAP1	NM_000593	human	genbank	57_37b	-1	reviewed	silent	c.2334	p.G778	0.054	superfamily_SSF52540,HMMSmart_AAA,HMMPfam_ABC_tran	superfamily_ABC_TM_1,HMMPfam_ABC_membrane,superfamily_SSF52540,HMMSmart_AAA,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
TBCC	6903	genome.wustl.edu	37	6	42713573	42713573	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	42713573	42713573	G	A	SNP	TBCC	NM_003192	human	genbank	57_37b	-1	reviewed	missense	c.239	p.S80L	0.301	NULL	HMMPfam_TBCC,HMMSmart_SM00673	-	no_errors	
TBL1X	6907	genome.wustl.edu	37	X	9683009	9683009	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	9683009	9683009	G	T	SNP	TBL1X	NM_001139466	human	genbank	57_37b	+1	reviewed	missense	c.1673	p.G558V	0.998	superfamily_WD40 repeat-like,HMMSmart_SM00320	HMMSmart_SM00667,HMMPfam_LisH,HMMSmart_SM00320,HMMPfam_WD40,superfamily_WD40 repeat-like,PatternScan_WD_REPEATS_1	-	no_errors	
TBL3	10607	genome.wustl.edu	37	16	2024405	2024405	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2024405	2024405	A	G	SNP	TBL3	NM_006453	human	genbank	57_37b	+1	reviewed	missense	c.218	p.D73G	0.955	superfamily_WD40_like,HMMSmart_WD40	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMPfam_Utp13	-	no_errors	
TBX18	9096	genome.wustl.edu	37	6	85448266	85448266	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	85448266	85448266	G	T	SNP	TBX18	NM_001080508	human	genbank	57_37b	-1	provisional	missense	c.1048	p.P350T	1.000	NULL	superfamily_P53_like_DNA_bnd,HMMSmart_TBOX,HMMPfam_T-box,PatternScan_TBOX_1,PatternScan_TBOX_2	-	no_errors	
TCHH	7062	genome.wustl.edu	37	1	152085140	152085140	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152085140	152085140	C	G	SNP	TCHH	NM_007113	human	genbank	57_37b	-1	provisional	missense	c.553	p.E185Q	0.006	NULL	superfamily_SSF47473,HMMPfam_S_100,PatternScan_S100_CABP,PatternScan_EF_HAND_1	-	no_errors	
TKTL2	84076	genome.wustl.edu	37	4	164393824	164393824	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	164393824	164393824	A	G	SNP	TKTL2	NM_032136	human	genbank	57_37b	-1	validated	missense	c.1063	p.F355L	0.995	superfamily_SSF52518,HMMPfam_Transket_pyr	PatternScan_TRANSKETOLASE_1,PatternScan_TRANSKETOLASE_2,superfamily_SSF52518,HMMPfam_Transketolase_N,HMMPfam_Transket_pyr,superfamily_Transketo_C_like,HMMPfam_Transketolase_C	-	no_errors	
TSLP	85480	genome.wustl.edu	37	5	110411667	110411667	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	110411667	110411667	G	A	SNP	TSLP	NM_033035	human	genbank	57_37b	+1	reviewed	silent	c.375	p.K125	0.000	NULL	NULL	-	no_errors	
TTBK1	84630	genome.wustl.edu	37	6	43251629	43251629	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	43251629	43251629	C	T	SNP	TTBK1	NM_032538	human	genbank	57_37b	+1	validated	missense	c.3151	p.R1051C	0.734	NULL	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP	-	no_errors	
VWF	7450	genome.wustl.edu	37	12	6122726	6122726	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6122726	6122726	G	A	SNP	VWF	NM_000552	human	genbank	57_37b	-1	reviewed	silent	c.5541	p.N1847	0.023	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMPfam_VWC,PatternScan_VWFC_1,HMMSmart_SM00041,PatternScan_CTCK_1	-	no_errors	
WIT1	51352	genome.wustl.edu	37	11	32460227	32460227	+	RNA	SNP	C	T	T	rs7120686	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	32460227	32460227	C	T	SNP	WIT1	NR_023920	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.001	-	-	-		
ZNF473	25888	genome.wustl.edu	37	19	50548923	50548923	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	50548923	50548923	G	T	SNP	ZNF473	NM_001006656	human	genbank	57_37b	+1	validated	missense	c.1223	p.R408L	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF486	90649	genome.wustl.edu	37	19	20308633	20308633	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	20308633	20308633	C	G	SNP	ZNF486	NM_052852	human	genbank	57_37b	+1	provisional	missense	c.1114	p.H372D	0.983	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,HMMSmart_ZnF_C2H2,superfamily_SSF57667,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF518B	85460	genome.wustl.edu	37	4	10445216	10445216	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	10445216	10445216	C	T	SNP	ZNF518B	NM_053042	human	genbank	57_37b	-1	validated	missense	c.2737	p.D913N	0.994	NULL	HMMSmart_ZnF_C2H2,superfamily_SSF57667,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZSCAN10	84891	genome.wustl.edu	37	16	3140511	3140511	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0CT-01A-31W-A071-09	TCGA-A2-A0CT-10A-01W-A071-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3140511	3140511	G	A	SNP	ZSCAN10	NM_032805	human	genbank	57_37b	-1	provisional	silent	c.759	p.L253	0.000	NULL	HMMPfam_SCAN,HMMSmart_SCAN,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
