Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
C21orf99	149992	genome.wustl.edu	37	21	14414872	14414872	+	RNA	SNP	C	C	T	rs11088818	byCluster;byFrequency;byHapMap	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	14414872	14414872	C	T	SNP	C21orf99	NR_026916	human	genbank	57_37b	+1	provisional	rna	NULL	NULL	0.961	-	-	-		
CCDC105	126402	genome.wustl.edu	37	19	15131381	15131381	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	15131381	15131381	C	T	SNP	CCDC105	NM_173482	human	genbank	57_37b	+1	validated	missense	c.784	p.H262Y	0.995	NULL	NULL	-	no_errors	
COL27A1	85301	genome.wustl.edu	37	9	117004482	117004482	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	117004482	117004482	A	T	SNP	COL27A1	NM_032888	human	genbank	57_37b	+1	provisional	missense	c.2851	p.M951L	0.985	HMMPfam_Collagen	HMMSmart_SM00210,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Collagen,HMMSmart_SM00038,HMMPfam_COLFI	-	no_errors	
CPN1	1369	genome.wustl.edu	37	10	101835672	101835672	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	101835672	101835672	G	A	SNP	CPN1	NM_001308	human	genbank	57_37b	-1	reviewed	missense	c.416	p.A139V	0.003	superfamily_Zn-dependent exopeptidases,HMMSmart_SM00631,HMMPfam_Peptidase_M14	superfamily_Zn-dependent exopeptidases,HMMSmart_SM00631,HMMPfam_Peptidase_M14,PatternScan_CARBOXYPEPT_ZN_1,PatternScan_CARBOXYPEPT_ZN_2,superfamily_Carboxypeptidase regulatory domain	-	no_errors	
CRABP1	1381	genome.wustl.edu	37	15	78632830	78632830	+	Silent	SNP	C	C	G	rs1127472	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	78632830	78632830	C	G	SNP	CRABP1	NM_004378	human	genbank	57_37b	+1	reviewed	silent	c.60	p.L20	1.000	superfamily_Lipocalins,HMMPfam_Lipocalin,PatternScan_FABP	superfamily_Lipocalins,HMMPfam_Lipocalin,PatternScan_FABP	-		
CROCCL1	84809	genome.wustl.edu	37	1	16955128	16955128	+	RNA	SNP	A	A	G	rs1762949	byCluster;byFrequency;by2Hit2Allele;byHapMap	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16955128	16955128	A	G	SNP	CROCCL1	NR_026752	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.562	-	-	-		
ENSG00000213974	0	genome.wustl.edu	37	19	22786126	22786126	+	Missense_Mutation	SNP	T	T	A	rs2304143	byCluster;byFrequency;bySubmitter;by1000genomes	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	22786126	22786126	T	A	SNP	ENSG00000213974	ENST00000397112	human	ensembl	57_37b	+1	known	missense	c.575	p.F192Y	1.000	NULL	NULL	-		
ENSG00000227467	0	genome.wustl.edu	37	14	105521976	105521976	+	RNA	DEL	C	C	-	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	105521976	105521976	C	-	DEL	ENSG00000227467	ENST00000450804	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.003	-	-	(deletion:rna[105521770,105522493])	no_errors	
ENSG00000228868	0	genome.wustl.edu	37	3	75386297	75386297	+	Silent	SNP	G	G	A	rs6769147	byCluster;byFrequency;by1000genomes	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	75386297	75386297	G	A	SNP	ENSG00000228868	ENST00000450747	human	ensembl	57_37b	-1	known	silent	c.135	p.S45	1.000	HMMSmart_SM00408,HMMPfam_I-set,HMMSmart_SM00409,superfamily_Immunoglobulin	HMMSmart_SM00408,HMMPfam_I-set,HMMSmart_SM00409,superfamily_Immunoglobulin	-		
ENSG00000247570	0	genome.wustl.edu	37	8	70855209	70855209	+	RNA	SNP	C	C	T	rs17435904	byCluster;byFrequency;by1000genomes	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	70855209	70855209	C	T	SNP	ENSG00000247570	ENST00000424643	human	ensembl	57_37b	+1	known	rna	NULL	NULL	1.000	-	-	-		
EPS8L1	54869	genome.wustl.edu	37	19	55587822	55587822	+	Missense_Mutation	SNP	G	G	A	rs12609976	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55587822	55587822	G	A	SNP	EPS8L1	NM_133180	human	genbank	57_37b	+1	reviewed	missense	c.10	p.A4T	0.565	NULL	HMMSmart_SM00462,HMMPfam_PTB,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_1	-		
FGF11	2256	genome.wustl.edu	37	17	7346061	7346061	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7346061	7346061	G	A	SNP	FGF11	NM_004112	human	genbank	57_37b	+1	reviewed	missense	c.557	p.R186Q	1.000	superfamily_Cytok_IL1_like,HMMSmart_FGF,HMMPfam_FGF	superfamily_Cytok_IL1_like,HMMSmart_FGF,HMMPfam_FGF,PatternScan_HBGF_FGF	-	no_errors	
GALNT10	55568	genome.wustl.edu	37	5	153760044	153760044	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	153760044	153760044	C	G	SNP	GALNT10	NM_198321	human	genbank	57_37b	+1	reviewed	missense	c.791	p.P264R	1.000	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,HMMPfam_Ricin_B_lectin,HMMSmart_SM00458	-	no_errors	
GAS6	2621	genome.wustl.edu	37	13	114531565	114531565	+	Silent	SNP	C	C	G	rs8191975	byCluster;byFrequency;by1000genomes	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	114531565	114531565	C	G	SNP	GAS6	NM_000820	human	genbank	57_37b	-1	reviewed	silent	c.1263	p.L421	0.104	superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	HMMSmart_GLA,superfamily_VitK_dep_GLA,HMMPfam_Gla,PatternScan_GLA_1,superfamily_SSF57196,HMMSmart_EGF,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_CA,HMMSmart_EGF_CA,HMMPfam_EGF,HMMPfam_EGF_CA,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	-		
GLRX3	10539	genome.wustl.edu	37	10	131934747	131934747	+	Missense_Mutation	SNP	G	G	C	rs13991	byCluster;byFrequency;by1000genomes	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	131934747	131934747	G	C	SNP	GLRX3	NM_006541	human	genbank	57_37b	+1	provisional	missense	c.63	p.Q21H	0.999	superfamily_Thiordxn-like_fd	PatternScan_THIOREDOXIN_1,superfamily_Thiordxn-like_fd,HMMPfam_Thioredoxin,HMMPfam_Glutaredoxin	-		
GPR143	4935	genome.wustl.edu	37	X	9716674	9716674	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	9716674	9716674	C	T	SNP	GPR143	NM_000273	human	genbank	57_37b	-1	reviewed	missense	c.548	p.G183D	1.000	HMMPfam_Ocular_alb	HMMPfam_Ocular_alb	-	no_errors	
HLA-J	0	genome.wustl.edu	37	6	29977145	29977145	+	Splice_Site	SNP	G	G	C	rs115037049	byCluster;by1000genomes	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	29977145	29977145	G	C	SNP	HLA-J	ENST00000376791	human	ensembl	57_37b	+1	known	splice_site	c.660+1	e4+1	0.997	-	-	-		
HRH2	3274	genome.wustl.edu	37	5	175110783	175110783	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	175110783	175110783	G	A	SNP	HRH2	NM_001131055	human	genbank	57_37b	+1	reviewed	missense	c.547	p.G183R	0.990	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
HSP90AB4P	664618	genome.wustl.edu	37	15	58983683	58983683	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	58983683	58983683	C	G	SNP	HSP90AB4P	ENST00000380522	human	ensembl	57_37b	-1	known	missense	c.1137	p.E379D	1.000	superfamily_Ribosomal_S5_D2-typ_fold,HMMPfam_HSP90	superfamily_ATP_bd_ATPase,HMMPfam_HATPase_c,HMMSmart_HATPase_c,HMMPfam_HSP90,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_SSF110942	-	no_errors	
MAGEL2	54551	genome.wustl.edu	37	15	23890165	23890165	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	23890165	23890165	G	A	SNP	MAGEL2	NM_019066	human	genbank	57_37b	-1	validated	nonsense	c.916	p.Q306*	0.780	NULL	HMMPfam_MAGE	-	no_errors	
MUC2	4583	genome.wustl.edu	37	11	1092598	1092599	+	In_Frame_Ins	INS	-	-	CAA	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	1092598	1092599	-	CAA	INS	MUC2	NM_002457	human	genbank	57_37b	+1	reviewed	in_frame_ins	c.4417_4418	p.1477in_frame_insT	0.290:0.230	NULL	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMSmart_SM00215,superfamily_PMP inhibitors,HMMSmart_SM00214,PatternScan_VWFC_1,PatternScan_EGF_1,HMMPfam_VWC,HMMPfam_Cys_knot,HMMSmart_SM00041,PatternScan_CTCK_1	-	no_errors	
MUC21	394263	genome.wustl.edu	37	6	30954356	30954356	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	30954356	30954356	C	T	SNP	MUC21	NM_001010909	human	genbank	57_37b	+1	validated	missense	c.404	p.A135V	0.499	NULL	NULL	-	no_errors	
MYEF2	50804	genome.wustl.edu	37	15	48441260	48441260	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	48441260	48441260	C	T	SNP	MYEF2	NM_016132	human	genbank	57_37b	-1	validated	nonsense	c.1608	p.W536*	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
MYO7A	4647	genome.wustl.edu	37	11	76910861	76910861	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	76910861	76910861	C	A	SNP	MYO7A	NM_000260	human	genbank	57_37b	+1	reviewed	missense	c.4850	p.P1617H	1.000	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_1	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,HMMSmart_SM00139,HMMPfam_MyTH4,HMMSmart_SM00295,HMMPfam_FERM_N,superfamily_Second domain of FERM,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_1,HMMPfam_FERM_M	-	no_errors	
NOS1AP	9722	genome.wustl.edu	37	1	162337159	162337159	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	162337159	162337159	G	A	SNP	NOS1AP	NM_014697	human	genbank	57_37b	+1	reviewed	missense	c.1423	p.E475K	1.000	NULL	superfamily_SSF50729,HMMSmart_PTB,HMMPfam_PID	-	no_errors	
PCDHA11	56138	genome.wustl.edu	37	5	140248828	140248828	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140248828	140248828	G	A	SNP	PCDHA11	NM_018902	human	genbank	57_37b	+1	reviewed	missense	c.140	p.R47H	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	T			TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	T	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047L	1.000	HMMSmart_PI3Kc,superfamily_Kinase_like	HMMSmart_C2,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,HMMPfam_PI3Ka,HMMSmart_PI3Ka,HMMPfam_PI3K_C2,HMMSmart_PI3K_C2,HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_C2_CaLB,superfamily_Kinase_like,superfamily_ARM-type_fold,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2,superfamily_SSF54236	-	no_errors	
PLCB4	5332	genome.wustl.edu	37	20	9401989	9401989	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	9401989	9401989	G	A	SNP	PLCB4	NM_000933	human	genbank	57_37b	+1	reviewed	missense	c.2164	p.V722I	1.000	superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	superfamily_SSF50729,superfamily_SSF47473,HMMPfam_efhand_like,HMMSmart_PLCXc,HMMPfam_PI-PLC-X,superfamily_PLC-like_Pdiesterase_TIM-brl,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,HMMPfam_DUF1154	-	no_errors	
PPP1R13B	23368	genome.wustl.edu	37	14	104224078	104224078	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	104224078	104224078	G	T	SNP	PPP1R13B	NM_015316	human	genbank	57_37b	-1	reviewed	missense	c.365	p.P122Q	0.997	NULL	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,HMMPfam_SH3_1,HMMSmart_SH3	-	no_errors	
RCOR1	23186	genome.wustl.edu	37	14	103167650	103167650	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	103167650	103167650	G	T	SNP	RCOR1	NM_015156	human	genbank	57_37b	+1	validated	missense	c.472	p.G158W	1.000	NULL	HMMPfam_ELM2,superfamily_Homeodomain_like,HMMSmart_SANT,HMMPfam_Myb_DNA-binding	-	no_errors	
SCAF1	58506	genome.wustl.edu	37	19	50154408	50154408	+	Silent	SNP	C	C	T	rs12976076	byCluster;by1000genomes	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	50154408	50154408	C	T	SNP	SCAF1	NM_021228	human	genbank	57_37b	+1	validated	silent	c.762	p.T254	0.039	NULL	NULL	-		
SCN5A	6331	genome.wustl.edu	37	3	38622467	38622467	+	Silent	SNP	T	T	C	rs7430407	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	38622467	38622467	T	C	SNP	SCN5A	NM_001099404	human	genbank	57_37b	-1	reviewed	silent	c.3183	p.E1061	0.851	HMMPfam_Na_trans_assoc	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans,HMMPfam_Na_trans_assoc,HMMPfam_IQ	-		
SGCZ	137868	genome.wustl.edu	37	8	14412415	14412415	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	14412415	14412415	T	-	DEL	SGCZ	NM_139167	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.60	p.L21fs	0.953	NULL	HMMPfam_Sarcoglycan_1	(deletion:cds_exon[14412241,14412435])	no_errors	
SMYD3	64754	genome.wustl.edu	37	1	245912935	245912935	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	245912935	245912935	C	T	SNP	SMYD3	NM_022743	human	genbank	57_37b	-1	validated	missense	c.1040	p.R347K	1.000	NULL	HMMPfam_zf-MYND,superfamily_SSF82199,HMMSmart_SET,HMMPfam_SET	-	no_errors	
TPP1	1200	genome.wustl.edu	37	11	6638532	6638532	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	6638532	6638532	C	T	SNP	TPP1	NM_000391	human	genbank	57_37b	-1	reviewed	missense	c.508	p.V170M	1.000	superfamily_Protease propeptides/inhibitors,HMMPfam_Pro-kuma_activ	superfamily_Protease propeptides/inhibitors,HMMPfam_Pro-kuma_activ,superfamily_Subtilisin-like	-	no_errors	
TUBBP5	0	genome.wustl.edu	37	9	141071475	141071475	+	Missense_Mutation	SNP	C	C	G	rs7863719	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	141071475	141071475	C	G	SNP	TUBBP5	ENST00000290377	human	ensembl	57_37b	+1	known	missense	c.878	p.A293G	1.000	superfamily_Tub_FtsZ_C,HMMPfam_Tubulin_C	HMMPfam_Tubulin,superfamily_Tubulin_FtsZ,PatternScan_TUBULIN,superfamily_Tub_FtsZ_C,HMMPfam_Tubulin_C	-		
VAV2	7410	genome.wustl.edu	37	9	136643908	136643908	+	Silent	SNP	G	G	A	rs56233098	byCluster;by1000genomes	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	136643908	136643908	G	A	SNP	VAV2	NM_001134398	human	genbank	57_37b	-1	reviewed	silent	c.1866	p.G622	0.065	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2	HMMPfam_CH,superfamily_Calponin-homology domain CH-domain,HMMSmart_SM00033,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00109,PatternScan_ZF_DAG_PE_1,superfamily_Cysteine-rich domain,HMMPfam_C1_1,superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,HMMPfam_SH3_1	-		
XIRP2	129446	genome.wustl.edu	37	2	168115850	168115850	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	168115850	168115850	A	T	SNP	XIRP2	NM_001079810	human	genbank	57_37b	+1	validated	missense	c.2794	p.R932W	0.989	NULL	superfamily_SSF57716,HMMSmart_LIM,PatternScan_LIM_DOMAIN_1,HMMPfam_LIM	-	no_errors	
ZMAT5	55954	genome.wustl.edu	37	22	30136653	30136653	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	30136653	30136653	C	A	SNP	ZMAT5	NM_001003692	human	genbank	57_37b	-1	validated	missense	c.257	p.S86I	0.617	NULL	HMMPfam_zf-U1,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-CCCH,HMMSmart_SM00356	-	no_errors	
ZNF70	7621	genome.wustl.edu	37	22	24086804	24086804	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0EM-01A-11W-A050-09	TCGA-A2-A0EM-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	24086804	24086804	T	C	SNP	ZNF70	NM_021916	human	genbank	57_37b	-1	provisional	missense	c.524	p.K175R	1.000	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
