Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
AHNAK2	113146	genome.wustl.edu	37	14	105411781	105411781	+	Missense_Mutation	SNP	G	G	A	rs10438247	byCluster;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	105411781	105411781	G	A	SNP	AHNAK2	NM_138420	human	genbank	57_37b	-1	validated	missense	c.10007	p.P3336L	0.046	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_Involucrin	-		
C11orf35	256329	genome.wustl.edu	37	11	556531	556531	+	Missense_Mutation	SNP	C	C	G	rs115226534	by1000genomes	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	556531	556531	C	G	SNP	C11orf35	NM_173573	human	genbank	57_37b	-1	validated	missense	c.1034	p.C345S	0.000	superfamily_Lamin A/C globular tail domain	superfamily_Lamin A/C globular tail domain	-		
CBFB	865	genome.wustl.edu	37	16	67100696	67100696	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	67100696	67100696	G	A	SNP	CBFB	NM_022845	human	genbank	57_37b	+1	reviewed	missense	c.394	p.A132T	1.000	HMMPfam_CBF_beta,superfamily_CBF_beta	HMMPfam_CBF_beta,superfamily_CBF_beta	-	no_errors	
CCNL1	57018	genome.wustl.edu	37	3	156877732	156877740	+	In_Frame_Del	DEL	GAAACTTCC	GAAACTTCC	-	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	GAAACTTCC	GAAACTTCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	156877732	156877740	GAAACTTCC	-	DEL	CCNL1	NM_020307	human	genbank	57_37b	-1	validated	in_frame_del	c.152_144	p.EVS49in_frame_del	0.001:0.004:0.001:0.987:1.000:0.993:1.000:0.998:0.680	NULL	HMMPfam_Cyclin_N,superfamily_Cyclin-like,HMMSmart_SM00385	(deletion:cds_exon[156877581,156877883])	no_errors	
CEACAM21	90273	genome.wustl.edu	37	19	42092815	42092815	+	Splice_Site	SNP	T	T	A	rs3745936	byCluster;byFrequency;by1000genomes	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	42092815	42092815	T	A	SNP	CEACAM21	NM_001098506	human	genbank	57_37b	+1	validated	splice_site	c.882-2	e7-2	0.021	-	-	-		
DEAF1	10522	genome.wustl.edu	37	11	687941	687941	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	687941	687941	C	A	SNP	DEAF1	NM_021008	human	genbank	57_37b	-1	validated	missense	c.634	p.G212C	1.000	superfamily_SAND domain-like,HMMPfam_SAND,HMMSmart_SM00258	superfamily_SAND domain-like,HMMPfam_SAND,HMMSmart_SM00258,HMMPfam_zf-MYND,PatternScan_ZF_MYND_1	-	no_errors	
DPP10	57628	genome.wustl.edu	37	2	116497433	116497433	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	116497433	116497433	G	A	SNP	DPP10	NM_020868	human	genbank	57_37b	+1	reviewed	silent	c.816	p.A272	0.002	superfamily_Dipeptidyl peptidase IV/CD26 N-terminal domain,HMMPfam_DPPIV_N	superfamily_Dipeptidyl peptidase IV/CD26 N-terminal domain,HMMPfam_DPPIV_N,superfamily_alpha/beta-Hydrolases,HMMPfam_Peptidase_S9	-	no_errors	
ELP2	55250	genome.wustl.edu	37	18	33722826	33722826	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	33722826	33722826	C	T	SNP	ELP2	NM_018255	human	genbank	57_37b	+1	provisional	silent	c.693	p.C231	0.998	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors	
ENPEP	2028	genome.wustl.edu	37	4	111397624	111397624	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	111397624	111397624	T	-	DEL	ENPEP	NM_001977	human	genbank	57_37b	+1	validated	frame_shift_del	c.54	p.H18fs	0.756	NULL	"superfamily_Leukotriene A4 hydrolase N-terminal domain,HMMPfam_Peptidase_M1,superfamily_Metalloproteases (""zincins"") catalytic domain"	(deletion:cds_exon[111397571,111398214])	no_errors	
ENSG00000214331	0	genome.wustl.edu	37	16	74386002	74386002	+	Silent	SNP	A	A	G	rs2549101	byCluster	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	74386002	74386002	A	G	SNP	ENSG00000214331	ENST00000429810	human	ensembl	57_37b	-1	known	silent	c.543	p.P181	0.014	superfamily_SSF51905,HMMPfam_DAO	superfamily_SSF51905,HMMPfam_DAO	-		
ENSG00000235297	0	genome.wustl.edu	37	18	72057126	72057126	+	Missense_Mutation	SNP	T	T	C	rs12959382	byCluster;byFrequency;by1000genomes	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	72057126	72057126	T	C	SNP	ENSG00000235297	ENST00000414666	human	ensembl	57_37b	-1	known	missense	c.407	p.N136S	1.000	HMMPfam_Ribosomal_S30	HMMSmart_SM00213,superfamily_Ubiquitin-like,HMMPfam_ubiquitin,PatternScan_UBIQUITIN_1,HMMPfam_Ribosomal_S30	-		
ENSG00000244813	0	genome.wustl.edu	37	12	124421453	124421453	+	RNA	SNP	T	T	C	rs9863	byCluster;byFrequency;bySubmitter;by2Hit2Allele;by1000genomes	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124421453	124421453	T	C	SNP	ENSG00000244813	ENST00000500417	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.738	-	-	-		
ENSG00000245476	0	genome.wustl.edu	37	10	72531323	72531323	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	72531323	72531323	C	T	SNP	ENSG00000245476	ENST00000499814	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	
ENSG00000245549	0	genome.wustl.edu	37	1	16950470	16950470	+	RNA	SNP	C	C	T	rs12144467	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16950470	16950470	C	T	SNP	ENSG00000245549	ENST00000501442	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.996	-	-	-		
ENSG00000245986	0	genome.wustl.edu	37	16	784920	784920	+	RNA	SNP	A	A	G	rs9932304	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	784920	784920	A	G	SNP	ENSG00000245986	ENST00000502230	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.001	-	-	-		
ENSG00000246667	0	genome.wustl.edu	37	1	111663040	111663040	+	RNA	SNP	A	A	G	rs59467711	byCluster;by1000genomes	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	111663040	111663040	A	G	SNP	ENSG00000246667	ENST00000502063	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.102	-	-	-		
GJA1	2697	genome.wustl.edu	37	6	121768373	121768373	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	121768373	121768373	T	G	SNP	GJA1	NM_000165	human	genbank	57_37b	+1	reviewed	missense	c.380	p.L127W	0.999	HMMPfam_Connexin	HMMPfam_Connexin,HMMSmart_CNX,PatternScan_CONNEXINS_1,HMMPfam_Connexin_CCC,PatternScan_CONNEXINS_2,HMMPfam_Connexin43	-	no_errors	
GPR97	222487	genome.wustl.edu	37	16	57719640	57719640	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	57719640	57719640	G	A	SNP	GPR97	NM_170776	human	genbank	57_37b	+1	validated	missense	c.1342	p.V448M	0.517	HMMPfam_7tm_2	PatternScan_G_PROTEIN_RECEP_F2_1,PatternScan_G_PROTEIN_RECEP_F2_2,HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2	-	no_errors	
GPS2	2874	genome.wustl.edu	37	17	7217829	7217830	+	In_Frame_Ins	INS	-	-	ATT	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7217829	7217830	-	ATT	INS	GPS2	NM_004489	human	genbank	57_37b	-1	reviewed	in_frame_ins	c.182_181	p.SLEE61in_frame_ins*	0.999:1.000	NULL	NULL	-	no_errors	
HIST2H2BE	8349	genome.wustl.edu	37	1	149857851	149857851	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	149857851	149857851	C	T	SNP	HIST2H2BE	NM_003528	human	genbank	57_37b	-1	reviewed	missense	c.340	p.E114K	1.000	superfamily_Histone-fold,HMMSmart_SM00427,PatternScan_HISTONE_H2B	superfamily_Histone-fold,HMMSmart_SM00427,HMMPfam_Histone,PatternScan_HISTONE_H2B	-	no_errors	
KLRG2	346689	genome.wustl.edu	37	7	139138950	139138950	+	Missense_Mutation	SNP	C	C	G	rs17160911	byCluster;byFrequency;by1000genomes	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	139138950	139138950	C	G	SNP	KLRG2	NM_198508	human	genbank	57_37b	-1	validated	missense	c.1016	p.G339A	0.776	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	-		
LAPTM5	7805	genome.wustl.edu	37	1	31206746	31206746	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	31206746	31206746	C	T	SNP	LAPTM5	NM_006762	human	genbank	57_37b	-1	reviewed	missense	c.718	p.E240K	0.999	HMMPfam_Mtp	HMMPfam_Mtp	-	no_errors	
LOC100131592	0	genome.wustl.edu	37	2	63870959	63870959	+	RNA	SNP	T	T	G	rs262477	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	63870959	63870959	T	G	SNP	LOC100131592	XR_078251	human	genbank	57_37b	+1	model	rna	NULL	NULL	1.000	-	-	-		
LOC100289574	0	genome.wustl.edu	37	16	32190861	32190861	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	32190861	32190861	G	T	SNP	LOC100289574	XM_002343438	human	genbank	57_37b	-1	model	missense	c.321	p.S107R	1.000	NULL	NULL	-	no_errors	
LOC729739	729739	genome.wustl.edu	37	15	74654146	74654146	+	RNA	SNP	T	T	C	rs4505257	byCluster	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	74654146	74654146	T	C	SNP	LOC729739	XR_016018	human	genbank	57_37b	+1	model	rna	NULL	NULL	1.000	-	-	-		
LOC729862	729862	genome.wustl.edu	37	5	28927390	28927390	+	RNA	SNP	G	G	A	rs573961	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	28927390	28927390	G	A	SNP	LOC729862	XR_040872	human	genbank	57_37b	+1	model	rna	NULL	NULL	0.991	-	-	-		
MGA	23269	genome.wustl.edu	37	15	42041007	42041007	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	42041007	42041007	A	T	SNP	MGA	NM_001080541	human	genbank	57_37b	+1	validated	silent	c.5532	p.P1844	1.000	NULL	superfamily_p53-like transcription factors,HMMSmart_SM00425,HMMPfam_T-box,PatternScan_TBOX_2,HMMPfam_HLH,superfamily_HLH helix-loop-helix DNA-binding domain,HMMSmart_SM00353	-	no_errors	
MR1	3140	genome.wustl.edu	37	1	181021547	181021547	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	181021547	181021547	C	T	SNP	MR1	NM_001531	human	genbank	57_37b	+1	provisional	nonsense	c.781	p.Q261*	1.000	superfamily_Immunoglobulin,HMMSmart_SM00407,HMMPfam_C1-set	HMMPfam_MHC_I,superfamily_MHC antigen-recognition domain,superfamily_Immunoglobulin,HMMSmart_SM00407,HMMPfam_C1-set,PatternScan_IG_MHC	-	no_errors	
MYH13	8735	genome.wustl.edu	37	17	10236473	10236473	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	10236473	10236473	G	A	SNP	MYH13	NM_003802	human	genbank	57_37b	-1	validated	missense	c.2092	p.R698C	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,superfamily_Prefoldin,HMMPfam_Myosin_tail_1	-	no_errors	
PDE3A	5139	genome.wustl.edu	37	12	20782980	20782980	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	20782980	20782980	G	A	SNP	PDE3A	NM_000921	human	genbank	57_37b	+1	validated	missense	c.1679	p.G560D	0.013	NULL	superfamily_SSF109604,HMMSmart_HDc,HMMPfam_PDEase_I,PatternScan_PDEASE_I	-	no_errors	
PHRF1	57661	genome.wustl.edu	37	11	607175	607175	+	Silent	SNP	G	G	A	rs936468	byCluster;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	607175	607175	G	A	SNP	PHRF1	NM_020901	human	genbank	57_37b	+1	validated	silent	c.1716	p.P572	0.000	NULL	superfamily_SSF57850,HMMPfam_zf-C3HC4,HMMSmart_RING,PatternScan_ZF_RING_1,PatternScan_ZF_PHD_1,superfamily_FYVE_PHD_ZnF,HMMSmart_PHD,HMMPfam_PHD	-		
PIK3CA	5290	genome.wustl.edu	37	3	178936082	178936082	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178936082	178936082	G	A	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	missense	c.1624	p.E542K	1.000	superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PLA2G12B	84647	genome.wustl.edu	37	10	74714297	74714297	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	74714297	74714297	G	A	SNP	PLA2G12B	NM_032562	human	genbank	57_37b	-1	validated	silent	c.147	p.Y49	1.000	HMMPfam_PLA2G12	PatternScan_PA2_HIS,PatternScan_PA2_ASP,HMMPfam_PLA2G12,superfamily_PhospholipaseA2,PatternScan_ER_TARGET	-	no_errors	
PLCD1	5333	genome.wustl.edu	37	3	38051941	38051941	+	Silent	SNP	T	T	C	rs9857730	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	38051941	38051941	T	C	SNP	PLCD1	NM_001130964	human	genbank	57_37b	-1	validated	silent	c.966	p.P322	0.213	HMMSmart_PLCXc,HMMPfam_PI-PLC-X,superfamily_PLC-like_Pdiesterase_TIM-brl	superfamily_SSF50729,HMMPfam_PH,HMMSmart_PH,HMMSmart_EFh,PatternScan_EF_HAND_1,superfamily_SSF47473,HMMPfam_efhand_like,HMMSmart_PLCXc,HMMPfam_PI-PLC-X,superfamily_PLC-like_Pdiesterase_TIM-brl,HMMPfam_PI-PLC-Y,HMMSmart_PLCYc,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2	-		
PNLIPRP3	119548	genome.wustl.edu	37	10	118202578	118202578	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	118202578	118202578	G	A	SNP	PNLIPRP3	NM_001011709	human	genbank	57_37b	+1	validated	silent	c.216	p.A72	0.419	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases	HMMPfam_Lipase,superfamily_alpha/beta-Hydrolases,PatternScan_LIPASE_SER,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT,PatternScan_HMG_COA_REDUCTASE_1	-	no_errors	
RAD51AP1	10635	genome.wustl.edu	37	12	4662226	4662226	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	4662226	4662226	G	T	SNP	RAD51AP1	NM_001130862	human	genbank	57_37b	+1	validated	missense	c.685	p.V229F	0.993	NULL	NULL	-	no_errors	
RDBP	7936	genome.wustl.edu	37	6	31923041	31923042	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	31923041	31923042	-	A	INS	RDBP	NM_002904	human	genbank	57_37b	-1	reviewed	frame_shift_ins	c.321_320	p.Q108fs	0.999:1.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
SH3D19	152503	genome.wustl.edu	37	4	152086824	152086824	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	152086824	152086824	G	A	SNP	SH3D19	NM_001009555	human	genbank	57_37b	-1	validated	missense	c.719	p.T240I	0.990	NULL	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,HMMPfam_SH3_1	-	no_errors	
SLC25A30	253512	genome.wustl.edu	37	13	45971426	45971426	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	45971426	45971426	T	A	SNP	SLC25A30	NM_001010875	human	genbank	57_37b	-1	validated	silent	c.801	p.P267	0.969	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	HMMPfam_Mito_carr,superfamily_Mitoch_carrier	-	no_errors	
SRBD1	55133	genome.wustl.edu	37	2	45704138	45704138	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	45704138	45704138	C	T	SNP	SRBD1	NM_018079	human	genbank	57_37b	-1	validated	missense	c.2043	p.M681I	1.000	NULL	HMMPfam_Tex_N,HMMSmart_SM00732,superfamily_Nucleic acid-binding proteins,HMMPfam_S1,HMMSmart_SM00316	-	no_errors	
SRD5A2	6716	genome.wustl.edu	37	2	31754498	31754498	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	31754498	31754498	T	C	SNP	SRD5A2	ENST00000233139	human	ensembl	57_37b	-1	known	missense	c.574	p.N192D	1.000	HMMPfam_Steroid_dh	HMMPfam_Steroid_dh	-	no_errors	
TRAK1	22906	genome.wustl.edu	37	3	42226205	42226205	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	42226205	42226205	G	A	SNP	TRAK1	NM_001042646	human	genbank	57_37b	+1	validated	missense	c.392	p.R131H	1.000	HMMPfam_HAP1_N	HMMPfam_HAP1_N,PatternScan_HEMOPEXIN	-	no_errors	
ZNF471	57573	genome.wustl.edu	37	19	57036477	57036477	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A2-A0EO-01A-11W-A050-09	TCGA-A2-A0EO-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	57036477	57036477	A	T	SNP	ZNF471	NM_020813	human	genbank	57_37b	+1	validated	missense	c.1041	p.E347D	0.043	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
