Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
AGAP7	0	genome.wustl.edu	37	10	51485576	51485576	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	51485576	51485576	C	-	DEL	AGAP7	ENST00000416142	human	ensembl	57_37b	-1	known	frame_shift_del	c.256	p.A86fs	0.351	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Pyk2-associated protein beta ARF-GAP domain,HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	(deletion:cds_exon[51485542,51485576])	no_errors	
CCR2	1231	genome.wustl.edu	37	3	46399979	46399979	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	46399979	46399979	C	T	SNP	CCR2	NM_001123396	human	genbank	57_37b	+1	validated	nonsense	c.961	p.R321*	1.000	superfamily_Family A G protein-coupled receptor-like	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
CDH1	999	genome.wustl.edu	37	16	68862179	68862180	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	68862179	68862180	-	T	INS	CDH1	NM_004360	human	genbank	57_37b	+1	reviewed	frame_shift_ins	c.2267_2268	p.E757fs	1.000:0.999	HMMPfam_Cadherin_C	superfamily_Cadherin-like,HMMPfam_Cadherin_pro,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
CNNM1	26507	genome.wustl.edu	37	10	101150099	101150099	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	101150099	101150099	C	G	SNP	CNNM1	NM_020348	human	genbank	57_37b	+1	validated	missense	c.2711	p.T904R	0.199	NULL	HMMPfam_DUF21,HMMPfam_CBS,HMMSmart_CBS	-	no_errors	
CPT1A	1374	genome.wustl.edu	37	11	68548116	68548116	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	68548116	68548116	G	C	SNP	CPT1A	NM_001876	human	genbank	57_37b	-1	reviewed	missense	c.1450	p.L484V	0.996	superfamily_CoA-dependent acyltransferases,HMMPfam_Carn_acyltransf	superfamily_CoA-dependent acyltransferases,HMMPfam_Carn_acyltransf,PatternScan_ACYLTRANSF_C_1,PatternScan_ACYLTRANSF_C_2	-	no_errors	
CTPS2	56474	genome.wustl.edu	37	X	16716365	16716365	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	16716365	16716365	A	-	DEL	CTPS2	NM_001144002	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.432	p.I145fs	0.098	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_CTP_synth_N	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_CTP_synth_N,superfamily_Class I glutamine amidotransferase-like,HMMPfam_GATase	(deletion:cds_exon[16716359,16716459])	no_errors	
CXorf26	51260	genome.wustl.edu	37	X	75392998	75392998	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	75392998	75392998	G	A	SNP	CXorf26	NM_016500	human	genbank	57_37b	+1	predicted	missense	c.25	p.E9K	0.003	NULL	HMMPfam_DUF757	-	no_errors	
DOCK2	1794	genome.wustl.edu	37	5	169135223	169135223	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	169135223	169135223	C	T	SNP	DOCK2	NM_004946	human	genbank	57_37b	+1	validated	silent	c.1434	p.S478	0.009	NULL	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_Cytochrome c	-	no_errors	
ENSG00000232637	0	genome.wustl.edu	37	1	146215204	146215204	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	146215204	146215204	G	C	SNP	ENSG00000232637	ENST00000436832	human	ensembl	57_37b	-1	known	nonsense	c.2646	p.Y882*	0.003	HMMPfam_DUF1220	HMMPfam_DUF1220	-	no_errors	
ENSG00000233422	0	genome.wustl.edu	37	19	14854194	14854194	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	14854194	14854194	C	T	SNP	ENSG00000233422	ENST00000430444	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	
ENSG00000245549	0	genome.wustl.edu	37	1	16950252	16950252	+	RNA	DEL	G	G	-	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16950252	16950252	G	-	DEL	ENSG00000245549	ENST00000501442	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.356	-	-	(deletion:rna[16949246,16951432])	no_errors	
FAM110A	83541	genome.wustl.edu	37	20	825678	825678	+	Silent	SNP	T	T	C	rs538094	byCluster;by2Hit2Allele;by1000genomes	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	825678	825678	T	C	SNP	FAM110A	NM_001042353	human	genbank	57_37b	+1	validated	silent	c.231	p.F77	0.996	NULL	NULL	-		
FAM193A	8603	genome.wustl.edu	37	4	2717831	2717831	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	2717831	2717831	G	C	SNP	FAM193A	NM_003704	human	genbank	57_37b	+1	validated	missense	c.3581	p.R1194T	1.000	NULL	NULL	-	no_errors	
FUBP1	8880	genome.wustl.edu	37	1	78414918	78414918	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	78414918	78414918	A	G	SNP	FUBP1	NM_003902	human	genbank	57_37b	-1	reviewed	silent	c.1848	p.A616	0.990	HMMPfam_DUF1897	superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMSmart_SM00322,HMMPfam_KH_1,HMMPfam_DUF1897	-	no_errors	
GPR37	2861	genome.wustl.edu	37	7	124387024	124387024	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	124387024	124387024	G	A	SNP	GPR37	NM_005302	human	genbank	57_37b	-1	provisional	missense	c.1397	p.A466V	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors	
HCFC1R1	54985	genome.wustl.edu	37	16	3073329	3073331	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	CTC	CTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3073329	3073331	CTC	-	DEL	HCFC1R1	NM_001002018	human	genbank	57_37b	-1	validated	in_frame_del	c.186_184	p.E62in_frame_del	1.000:1.000:1.000	NULL	NULL	(deletion:cds_exon[3073234,3073362])	no_errors	
HMGCLL1	54511	genome.wustl.edu	37	6	55441924	55441924	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	55441924	55441924	G	C	SNP	HMGCLL1	NM_019036	human	genbank	57_37b	-1	validated	silent	c.150	p.V50	0.007	NULL	superfamily_Aldolase,HMMPfam_HMGL-like	-	no_errors	
IL11RA	3590	genome.wustl.edu	37	9	34655292	34655292	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	34655292	34655292	C	T	SNP	IL11RA	NM_001142784	human	genbank	57_37b	+1	reviewed	silent	c.78	p.C26	0.975	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig,superfamily_Fibronectin type III,HMMSmart_SM00060,PatternScan_HEMATOPO_REC_L_F3,HMMPfam_fn3	-	no_errors	
IL1R2	7850	genome.wustl.edu	37	2	102626044	102626044	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	102626044	102626044	T	A	SNP	IL1R2	NM_004633	human	genbank	57_37b	+1	reviewed	missense	c.88	p.F30I	0.000	superfamily_SSF48726	superfamily_SSF48726,HMMSmart_IG,HMMPfam_ig	-	no_errors	
KDM6A	7403	genome.wustl.edu	37	X	44896936	44896936	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	44896936	44896936	T	G	SNP	KDM6A	NM_021140	human	genbank	57_37b	+1	reviewed	splice_site	c.654+2	e8+2	1.000	-	-	-	no_errors	
LINGO4	339398	genome.wustl.edu	37	1	151774034	151774034	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	151774034	151774034	G	T	SNP	LINGO4	NM_001004432	human	genbank	57_37b	-1	provisional	missense	c.1147	p.P383T	1.000	superfamily_SSF52058,HMMSmart_LRRCT	superfamily_SSF52058,HMMPfam_LRRNT,HMMSmart_LRRNT,HMMSmart_LRR_TYP,HMMPfam_LRR_1,HMMSmart_LRRCT,superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2	-	no_errors	
LOC153328	153328	genome.wustl.edu	37	5	135186164	135186164	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	135186164	135186164	C	T	SNP	LOC153328	NM_145282	human	genbank	57_37b	+1	validated	silent	c.141	p.R47	0.925	HMMPfam_Mito_carr,superfamily_Mitoch_carrier	HMMPfam_Mito_carr,superfamily_Mitoch_carrier	-	no_errors	
LRP2	4036	genome.wustl.edu	37	2	170060647	170060647	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	170060647	170060647	C	A	SNP	LRP2	NM_004525	human	genbank	57_37b	-1	reviewed	missense	c.7850	p.R2617L	1.000	superfamily_SSF63825,HMMSmart_LY,HMMPfam_Ldl_recept_b	superfamily_LDL_rcpt_classA_cys-rich,HMMPfam_Ldl_recept_a,HMMSmart_LDLa,PatternScan_LDLRA_1,HMMSmart_EGF,superfamily_Grow_fac_recept,PatternScan_EGF_2,superfamily_SSF63825,HMMSmart_LY,HMMPfam_Ldl_recept_b,superfamily_SSF57196,HMMPfam_EGF,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_1	-	no_errors	
MEN1	4221	genome.wustl.edu	37	11	64574649	64574649	+	Splice_Site	SNP	A	A	C	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64574649	64574649	A	C	SNP	MEN1	NM_000244	human	genbank	57_37b	-1	reviewed	splice_site	c.839+2	e4+2	1.000	-	-	-	no_errors	
MFSD11	79157	genome.wustl.edu	37	17	74735072	74735072	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	74735072	74735072	C	G	SNP	MFSD11	NM_024311	human	genbank	57_37b	+1	provisional	missense	c.149	p.T50S	1.000	superfamily_MFS general substrate transporter,HMMPfam_DUF895	superfamily_MFS general substrate transporter,HMMPfam_DUF895	-	no_errors	
NLRC4	58484	genome.wustl.edu	37	2	32460481	32460481	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	32460481	32460481	A	G	SNP	NLRC4	ENST00000360906	human	ensembl	57_37b	-1	known	missense	c.2771	p.I924T	0.118	superfamily_RNI-like	HMMPfam_CARD,superfamily_DEATH domain,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT,superfamily_RNI-like	-	no_errors	
PCDHGA12	26025	genome.wustl.edu	37	5	140812078	140812078	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140812078	140812078	C	A	SNP	PCDHGA12	NM_003735	human	genbank	57_37b	+1	reviewed	silent	c.1752	p.P584	0.108	superfamily_Cadherin-like,HMMPfam_Cadherin	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	G			TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178952085	178952085	A	G	SNP	PIK3CA	NM_006218.2	human	genbank	58_37c	+1	reviewed	missense	c.3140	p.H1047R	1.000	superfamily_Kinase_like,HMMSmart_PI3Kc	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PPCDC	60490	genome.wustl.edu	37	15	75341501	75341501	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	75341501	75341501	C	T	SNP	PPCDC	NM_021823	human	genbank	57_37b	+1	validated	silent	c.540	p.A180	1.000	superfamily_Homo-oligomeric flavin-containing Cys decarboxylases HFCD	superfamily_Homo-oligomeric flavin-containing Cys decarboxylases HFCD,HMMPfam_Flavoprotein	-	no_errors	
SF3B2	10992	genome.wustl.edu	37	11	65825830	65825830	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	65825830	65825830	C	T	SNP	SF3B2	NM_006842	human	genbank	57_37b	+1	reviewed	missense	c.920	p.S307L	0.997	NULL	HMMPfam_SAP,HMMSmart_SM00513,HMMPfam_DUF382,HMMSmart_SM00581,HMMPfam_PSP	-	no_errors	
SPEG	10290	genome.wustl.edu	37	2	220337000	220337000	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	220337000	220337000	G	T	SNP	SPEG	NM_005876	human	genbank	57_37b	+1	validated	missense	c.3887	p.G1296V	1.000	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_SM00219	-	no_errors	
TDRKH	11022	genome.wustl.edu	37	1	151748589	151748589	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	151748589	151748589	C	T	SNP	TDRKH	NM_001083963	human	genbank	57_37b	-1	validated	silent	c.1200	p.K400	0.787	HMMPfam_TUDOR,superfamily_Tudor/PWWP/MBT,HMMSmart_SM00333	superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMSmart_SM00322,HMMPfam_KH_1,HMMPfam_TUDOR,superfamily_Tudor/PWWP/MBT,HMMSmart_SM00333	-	no_errors	
THSD7A	221981	genome.wustl.edu	37	7	11581237	11581237	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	11581237	11581237	C	T	SNP	THSD7A	NM_015204	human	genbank	57_37b	-1	validated	missense	c.1631	p.R544H	0.091	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	-	no_errors	
VWDE	221806	genome.wustl.edu	37	7	12373131	12373131	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	12373131	12373131	C	T	SNP	VWDE	NM_001135924	human	genbank	57_37b	-1	provisional	missense	c.4718	p.R1573H	0.862	HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_EGF_1	HMMSmart_SM00216,HMMPfam_VWD,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Growth factor receptor domain,HMMPfam_EGF_2	-	no_errors	
ZFP36L1	677	genome.wustl.edu	37	14	69256739	69256741	+	In_Frame_Del	DEL	GAT	GAT	-	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	GAT	GAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	69256739	69256741	GAT	-	DEL	ZFP36L1	NM_004926	human	genbank	57_37b	-1	reviewed	in_frame_del	c.528_526	p.I176in_frame_del	1.000:1.000:1.000	superfamily_SSF90229,HMMSmart_ZnF_C3H1,HMMPfam_zf-CCCH	HMMPfam_Tis11B_N,superfamily_SSF90229,HMMSmart_ZnF_C3H1,HMMPfam_zf-CCCH	(deletion:cds_exon[69256250,69257209])	no_errors	
ZIC4	84107	genome.wustl.edu	37	3	147114016	147114016	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	147114016	147114016	G	A	SNP	ZIC4	ENST00000383075	human	ensembl	57_37b	-1	known	missense	c.311	p.T104M	1.000	NULL	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZMIZ2	83637	genome.wustl.edu	37	7	44802938	44802938	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	44802938	44802938	G	A	SNP	ZMIZ2	NM_031449	human	genbank	57_37b	+1	validated	missense	c.1786	p.V596M	1.000	superfamily_RING/U-box,HMMPfam_zf-MIZ	superfamily_RING/U-box,HMMPfam_zf-MIZ	-	no_errors	
ZNF618	114991	genome.wustl.edu	37	9	116794996	116794996	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A2-A0T4-01A-31D-A099-09	TCGA-A2-A0T4-10A-01D-A099-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	116794996	116794996	C	T	SNP	ZNF618	NM_133374	human	genbank	57_37b	+1	validated	nonsense	c.877	p.Q293*	1.000	superfamily_SSF57667	HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,superfamily_SSF57667,HMMPfam_hATC	-	no_errors	
