Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ADORA1	134	genome.wustl.edu	37	1	203098133	203098133	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	203098133	203098133	A	T	SNP	ADORA1	NM_000674	human	genbank	57_37b	+1	reviewed	missense	c.164	p.D55V	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
AHNAK	79026	genome.wustl.edu	37	11	62284301	62284301	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	62284301	62284301	G	A	SNP	AHNAK	NM_001620	human	genbank	57_37b	-1	validated	missense	c.17588	p.S5863F	0.999	NULL	superfamily_PDZ,HMMPfam_PDZ,HMMSmart_PDZ,HMMPfam_CheC	-	no_errors	
ALDH1B1	219	genome.wustl.edu	37	9	38395914	38395914	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	38395914	38395914	G	T	SNP	ALDH1B1	NM_000692	human	genbank	57_37b	+1	reviewed	missense	c.169	p.V57F	0.567	superfamily_ALDH-like,HMMPfam_Aldedh	superfamily_ALDH-like,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_GLU,PatternScan_ALDEHYDE_DEHYDR_CYS	-	no_errors	
ANP32C	23520	genome.wustl.edu	37	4	165118440	165118440	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	165118440	165118440	C	T	SNP	ANP32C	NM_012403	human	genbank	57_37b	-1	reviewed	missense	c.424	p.D142N	1.000	superfamily_L domain-like	superfamily_L domain-like,HMMPfam_LRR_1	-	no_errors	
AOAH	313	genome.wustl.edu	37	7	36661342	36661342	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	36661342	36661342	G	A	SNP	AOAH	NM_001637	human	genbank	57_37b	-1	reviewed	silent	c.627	p.S209	0.000	NULL	PatternScan_LIPASE_GDSL_SER,superfamily_Saposin_like,HMMSmart_SapB,HMMPfam_SapB_2,superfamily_Esterase_SGNH_hydro-type,HMMPfam_Lipase_GDSL	-	no_errors	
ARHGAP12	94134	genome.wustl.edu	37	10	32197496	32197496	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	32197496	32197496	C	G	SNP	ARHGAP12	NM_018287	human	genbank	57_37b	-1	provisional	missense	c.288	p.Q96H	1.000	NULL	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	-	no_errors	
ARHGEF17	9828	genome.wustl.edu	37	11	73020375	73020376	+	In_Frame_Ins	INS	-	-	CTC	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	73020375	73020376	-	CTC	INS	ARHGEF17	NM_014786	human	genbank	57_37b	+1	validated	in_frame_ins	c.692_693	p.235in_frame_insS	0.998:1.000	NULL	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,superfamily_YVTN repeat-like/Quinoprotein amine dehydrogenase	-	no_errors	
ARID1A	8289	genome.wustl.edu	37	1	27106136	27106136	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	27106136	27106136	C	G	SNP	ARID1A	NM_006015	human	genbank	57_37b	+1	reviewed	missense	c.5747	p.S1916C	1.000	NULL	superfamily_ARID-like,HMMPfam_ARID,HMMSmart_SM00501	-	no_errors	
ARMCX1	51309	genome.wustl.edu	37	X	100808553	100808557	+	Frame_Shift_Del	DEL	CTGGA	CTGGA	-	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	CTGGA	CTGGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	100808553	100808557	CTGGA	-	DEL	ARMCX1	NM_016608	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.640_644	p.L214fs	0.959:0.961:0.947:0.980:0.981	superfamily_ARM-type_fold,HMMPfam_DUF634	superfamily_ARM-type_fold,HMMPfam_DUF634	(deletion:cds_exon[100807914,100809275])	no_errors	
ARMCX1	51309	genome.wustl.edu	37	X	100808560	100808569	+	Frame_Shift_Del	DEL	GAACAAATGA	GAACAAATGA	-	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	GAACAAATGA	GAACAAATGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	100808560	100808569	GAACAAATGA	-	DEL	ARMCX1	NM_016608	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.647_656	p.R216fs	0.993:0.993:0.986:0.995:0.995:0.996:0.994:0.996:1.000:1.000	HMMPfam_DUF634,superfamily_ARM-type_fold	HMMPfam_DUF634,superfamily_ARM-type_fold	(deletion:cds_exon[100807914,100809275])	no_errors	
ASAH2C	653365	genome.wustl.edu	37	10	48033003	48033003	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	48033003	48033003	T	C	SNP	ASAH2C	ENST00000426610	human	ensembl	57_37b	-1	known	silent	c.522	p.K174	0.987	HMMPfam_Ceramidase_alk	HMMPfam_Ceramidase_alk	-	no_errors	
BRCA2	675	genome.wustl.edu	37	13	32912555	32912555	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	32912555	32912555	G	T	SNP	BRCA2	NM_000059	human	genbank	57_37b	+1	reviewed	missense	c.4063	p.D1355Y	0.011	NULL	HMMPfam_BRCA2,superfamily_BRCA2_helical,HMMPfam_BRCA-2_helical,superfamily_Nucleic_acid_OB,HMMPfam_BRCA-2_OB1,HMMPfam_Tower,superfamily_SSF81878,HMMPfam_BRCA-2_OB3	-	no_errors	
CDK14	0	genome.wustl.edu	37	7	90377067	90377067	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	90377067	90377067	T	C	SNP	CDK14	NM_012395	human	genbank	57_37b	+1	validated	silent	c.387	p.A129	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_CYTOCHROME_B5_1,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
CR1	1378	genome.wustl.edu	37	1	207669639	207669639	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	207669639	207669639	G	A	SNP	CR1	NM_000651	human	genbank	57_37b	+1	reviewed	silent	c.27	p.P9	0.000	NULL	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors	
CXorf36	79742	genome.wustl.edu	37	X	45013241	45013241	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	45013241	45013241	A	G	SNP	CXorf36	NM_176819	human	genbank	57_37b	-1	validated	missense	c.875	p.I292T	0.328	NULL	NULL	-	no_errors	
DCC	1630	genome.wustl.edu	37	18	50589678	50589678	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	50589678	50589678	C	T	SNP	DCC	NM_005215	human	genbank	57_37b	+1	reviewed	missense	c.989	p.P330L	1.000	superfamily_Immunoglobulin	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMPfam_Neogenin_C	-	no_errors	
ENSG00000246368	0	genome.wustl.edu	37	1	205277461	205277461	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	205277461	205277461	C	T	SNP	ENSG00000246368	ENST00000499717	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	
EP400	57634	genome.wustl.edu	37	12	132529374	132529374	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	132529374	132529374	C	T	SNP	EP400	NM_015409	human	genbank	57_37b	+1	validated	silent	c.6657	p.D2219	0.997	NULL	HMMPfam_HSA,HMMSmart_HSA,superfamily_SSF52540,HMMSmart_DEXDc,HMMPfam_SNF2_N,HMMSmart_HELICc,HMMPfam_Helicase_C,superfamily_Homeodomain_like	-	no_errors	
FLG	2312	genome.wustl.edu	37	1	152283655	152283655	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152283655	152283655	C	T	SNP	FLG	NM_002016	human	genbank	57_37b	-1	reviewed	missense	c.3707	p.R1236H	0.000	HMMPfam_Filaggrin	superfamily_SSF47473,HMMPfam_S_100,PatternScan_S100_CABP,PatternScan_EF_HAND_1,HMMPfam_Filaggrin	-	no_errors	
GABRR2	2570	genome.wustl.edu	37	6	89981413	89981413	+	Silent	SNP	T	T	C	rs282117	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	89981413	89981413	T	C	SNP	GABRR2	NM_002043	human	genbank	57_37b	-1	reviewed	silent	c.324	p.V108	1.000	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD	superfamily_Nicotinic receptor ligand binding domain-like,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neurotransmitter-gated ion-channel transmembrane pore,HMMPfam_Neur_chan_memb	-		
GGA3	23163	genome.wustl.edu	37	17	73239562	73239562	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	73239562	73239562	C	T	SNP	GGA3	NM_138619	human	genbank	57_37b	-1	reviewed	silent	c.390	p.K130	1.000	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288	HMMPfam_VHS,superfamily_ENTH/VHS domain,HMMSmart_SM00288,superfamily_GAT-like domain,HMMPfam_GAT,superfamily_Clathrin adaptor appendage domain,HMMPfam_Alpha_adaptinC2,HMMSmart_SM00809	-	no_errors	
GUCY2C	2984	genome.wustl.edu	37	12	14839103	14839103	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	14839103	14839103	G	C	SNP	GUCY2C	NM_004963	human	genbank	57_37b	-1	validated	missense	c.387	p.F129L	1.000	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,HMMSmart_SM00044,superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,PatternScan_GUANYLATE_CYCLASE_1	-	no_errors	
KIDINS220	57498	genome.wustl.edu	37	2	8871022	8871022	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	8871022	8871022	G	A	SNP	KIDINS220	NM_020738	human	genbank	57_37b	-1	validated	missense	c.5144	p.P1715L	0.966	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,HMMPfam_KAP_NTPase,superfamily_SAM/Pointed domain	-	no_errors	
KIRREL	55243	genome.wustl.edu	37	1	158047872	158047872	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158047872	158047872	C	T	SNP	KIRREL	NM_018240	human	genbank	57_37b	+1	validated	silent	c.294	p.Y98	0.915	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_C2-set_2,HMMPfam_I-set	-	no_errors	
KLHL34	257240	genome.wustl.edu	37	X	21675572	21675572	+	Missense_Mutation	SNP	G	T	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	21675572	21675572	G	T	SNP	KLHL34	NM_153270	human	genbank	57_37b	-1	provisional	missense	c.335	p.T112N	0.743	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,HMMPfam_BACK,superfamily_Gal_oxid_central,HMMSmart_Kelch,HMMPfam_Kelch_1	-	no_errors	
MUC16	94025	genome.wustl.edu	37	19	8997511	8997511	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	8997511	8997511	G	T	SNP	MUC16	NM_024690	human	genbank	57_37b	-1	validated	missense	c.40911	p.F13637L	0.001	superfamily_SEA domain,HMMPfam_SEA	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors	
NAV1	89796	genome.wustl.edu	37	1	201687769	201687769	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	201687769	201687769	G	T	SNP	NAV1	NM_020443	human	genbank	57_37b	+1	reviewed	missense	c.1112	p.R371L	1.000	NULL	PatternScan_PPASE,superfamily_SSF52540,HMMSmart_AAA	-	no_errors	
NEFM	4741	genome.wustl.edu	37	8	24774866	24774866	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	24774866	24774866	G	A	SNP	NEFM	NM_005382	human	genbank	57_37b	+1	reviewed	missense	c.1498	p.E500K	0.958	NULL	HMMPfam_Filament_head,HMMPfam_Filament,PatternScan_IF	-	no_errors	
OVOS2	144203	genome.wustl.edu	37	12	31270080	31270081	+	In_Frame_Ins	INS	-	-	AAA	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	31270080	31270081	-	AAA	INS	OVOS2	XM_002343151	human	genbank	57_37b	-1	model	in_frame_ins	c.3789_3788	p.1264in_frame_insF	0.995:0.975	NULL	HMMPfam_A2M_N,HMMPfam_A2M_N_2,HMMPfam_A2M,PatternScan_PHOSPHOPANTETHEINE,superfamily_Terpenoid cyclases/Protein prenyltransferases,HMMPfam_Thiol-ester_cl,HMMPfam_A2M_comp,superfamily_Alpha-macroglobulin receptor domain,HMMPfam_A2M_recep	-	no_errors	
PCDHB16	57717	genome.wustl.edu	37	5	140564292	140564292	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140564292	140564292	G	T	SNP	PCDHB16	NM_020957	human	genbank	57_37b	+1	reviewed	missense	c.2158	p.A720S	0.000	NULL	HMMPfam_Cadherin_2,superfamily_Cadherin,PatternScan_CADHERIN_1,HMMSmart_CA,HMMPfam_Cadherin	-	no_errors	
PFKM	5213	genome.wustl.edu	37	12	48538908	48538908	+	Missense_Mutation	SNP	G	G	A	rs41291971	byCluster;by1000genomes	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	48538908	48538908	G	A	SNP	PFKM	NM_000289	human	genbank	57_37b	+1	reviewed	missense	c.2087	p.R696H	1.000	superfamily_Phosphofructokinase	HMMPfam_PFK,superfamily_Phosphofructokinase,PatternScan_PHOSPHOFRUCTOKINASE	-		
PGLYRP2	114770	genome.wustl.edu	37	19	15586523	15586523	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	15586523	15586523	G	A	SNP	PGLYRP2	NM_052890	human	genbank	57_37b	-1	validated	missense	c.958	p.R320W	0.912	NULL	superfamily_N-acetylmuramoyl-L-alanine amidase-like,HMMSmart_SM00701,HMMSmart_SM00644,HMMPfam_Amidase_2	-	no_errors	
PIK3CG	5294	genome.wustl.edu	37	7	106523500	106523500	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	106523500	106523500	C	T	SNP	PIK3CG	NM_002649	human	genbank	57_37b	+1	reviewed	silent	c.2652	p.D884	0.571	superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146	superfamily_Ubiquitin-like,HMMPfam_PI3K_rbd,HMMSmart_SM00144,HMMSmart_SM00142,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_PI3K_C2,superfamily_ARM repeat,HMMSmart_SM00145,HMMPfam_PI3Ka,superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PNMAL1	55228	genome.wustl.edu	37	19	46973388	46973388	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	46973388	46973388	G	A	SNP	PNMAL1	NM_018215	human	genbank	57_37b	-1	validated	missense	c.905	p.A302V	0.000	NULL	NULL	-	no_errors	
PRKCDBP	112464	genome.wustl.edu	37	11	6341507	6341507	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	6341507	6341507	A	T	SNP	PRKCDBP	NM_145040	human	genbank	57_37b	-1	reviewed	missense	c.200	p.L67Q	0.991	NULL	NULL	-	no_errors	
QSER1	79832	genome.wustl.edu	37	11	32954676	32954676	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	32954676	32954676	T	C	SNP	QSER1	NM_001076786	human	genbank	57_37b	+1	provisional	silent	c.1485	p.S495	0.648	NULL	NULL	-	no_errors	
RECQL5	9400	genome.wustl.edu	37	17	73654533	73654533	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	73654533	73654533	C	T	SNP	RECQL5	NM_004259	human	genbank	57_37b	-1	validated	missense	c.994	p.A332T	0.989	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00490,HMMPfam_Helicase_C	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_RecQ5	-	no_errors	
RIMBP2	23504	genome.wustl.edu	37	12	130935822	130935822	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	130935822	130935822	G	T	SNP	RIMBP2	NM_015347	human	genbank	57_37b	-1	validated	missense	c.371	p.P124H	0.022	NULL	superfamily_SH3-domain,HMMSmart_SM00326,HMMPfam_SH3_2,superfamily_Fibronectin type III,HMMPfam_fn3,HMMSmart_SM00060	-	no_errors	
SCEL	8796	genome.wustl.edu	37	13	78182240	78182240	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	78182240	78182240	A	T	SNP	SCEL	NM_144777	human	genbank	57_37b	+1	validated	missense	c.1207	p.S403C	0.014	NULL	HMMSmart_SM00132,PatternScan_LIM_DOMAIN_1	-	no_errors	
SLC13A2	9058	genome.wustl.edu	37	17	26818553	26818553	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	26818553	26818553	G	A	SNP	SLC13A2	NM_003984	human	genbank	57_37b	+1	validated	missense	c.673	p.V225M	0.878	HMMPfam_Na_sulph_symp	HMMPfam_Na_sulph_symp,PatternScan_NA_SULFATE	-	no_errors	
SPON1	10418	genome.wustl.edu	37	11	14279316	14279316	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	14279316	14279316	G	C	SNP	SPON1	ENST00000310358	human	ensembl	57_37b	+1	known	missense	c.1361	p.S454T	1.000	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	HMMPfam_Reeler,HMMPfam_Spond_N,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	-	no_errors	
TBC1D22B	55633	genome.wustl.edu	37	6	37254787	37254787	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	37254787	37254787	A	G	SNP	TBC1D22B	NM_017772	human	genbank	57_37b	+1	validated	missense	c.806	p.H269R	1.000	superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	superfamily_Ypt/Rab-GAP domain of gyp1p,HMMPfam_TBC,HMMSmart_SM00164	-	no_errors	
TNFRSF11A	8792	genome.wustl.edu	37	18	60017101	60017101	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	60017101	60017101	G	A	SNP	TNFRSF11A	NM_003839	human	genbank	57_37b	+1	reviewed	missense	c.214	p.G72S	1.000	superfamily_SSF57586,HMMSmart_TNFR	superfamily_SSF57586,HMMPfam_TNFR_c6,HMMSmart_TNFR,PatternScan_TNFR_NGFR_1	-	no_errors	
TP53BP2	7159	genome.wustl.edu	37	1	223991057	223991057	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	223991057	223991057	C	G	SNP	TP53BP2	NM_001031685	human	genbank	57_37b	-1	reviewed	missense	c.747	p.E249D	1.000	NULL	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,HMMPfam_SH3_1,HMMSmart_SH3	-	no_errors	
TRAFD1	10906	genome.wustl.edu	37	12	112578753	112578753	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	112578753	112578753	T	G	SNP	TRAFD1	NM_001143906	human	genbank	57_37b	+1	validated	missense	c.368	p.V123G	1.000	NULL	HMMSmart_ZnF_C2H2	-	no_errors	
TRPC5	7224	genome.wustl.edu	37	X	111078326	111078326	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	111078326	111078326	C	A	SNP	TRPC5	NM_012471	human	genbank	57_37b	-1	validated	missense	c.1719	p.Q573H	1.000	HMMPfam_Ion_trans	superfamily_Ankyrin repeat,HMMPfam_Ank,HMMSmart_SM00248,HMMPfam_TRP_2,HMMPfam_Ion_trans,PatternScan_RIBOSOMAL_S2_1	-	no_errors	
XIAP	331	genome.wustl.edu	37	X	123019797	123019797	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	123019797	123019797	C	A	SNP	XIAP	NM_001167	human	genbank	57_37b	+1	reviewed	silent	c.285	p.G95	0.834	superfamily_SSF57924,HMMSmart_BIR	PatternScan_ZF_RING_1,superfamily_SSF57924,HMMSmart_BIR,PatternScan_BIR_REPEAT_1,HMMPfam_BIR,HMMSmart_RING	-	no_errors	
ZDBF2	57683	genome.wustl.edu	37	2	207171377	207171377	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	207171377	207171377	G	T	SNP	ZDBF2	NM_020923	human	genbank	57_37b	+1	validated	missense	c.2125	p.D709Y	0.962	NULL	HMMPfam_zf-DBF	-	no_errors	
ZFHX3	463	genome.wustl.edu	37	16	72992581	72992581	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	72992581	72992581	G	T	SNP	ZFHX3	NM_006885	human	genbank	57_37b	-1	reviewed	missense	c.1464	p.D488E	0.925	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2,HMMSmart_SM00451,HMMSmart_SM00389,superfamily_Homeodomain-like,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
ZNF266	10781	genome.wustl.edu	37	19	9524420	9524420	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07I-01A-11W-A019-09	TCGA-A8-A07I-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9524420	9524420	C	T	SNP	ZNF266	NM_006631	human	genbank	57_37b	-1	validated	missense	c.1181	p.R394H	0.000	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	HMMSmart_KRAB,superfamily_SSF57667,HMMSmart_ZnF_C2H2,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
