Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABCA3	21	genome.wustl.edu	37	16	2347904	2347904	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	2347904	2347904	G	C	SNP	ABCA3	NM_001089	human	genbank	57_37b	-1	reviewed	missense	c.1915	p.Q639E	0.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ACO1	48	genome.wustl.edu	37	9	32440470	32440470	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	32440470	32440470	T	A	SNP	ACO1	NM_002197	human	genbank	57_37b	+1	reviewed	missense	c.2255	p.V752E	1.000	superfamily_Aconitase,HMMPfam_Aconitase_C	superfamily_Aconitase iron-sulfur domain,HMMPfam_Aconitase,PatternScan_ACONITASE_1,PatternScan_ACONITASE_2,superfamily_Aconitase,HMMPfam_Aconitase_C	-	no_errors	
ACPT	93650	genome.wustl.edu	37	19	51297015	51297015	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51297015	51297015	G	C	SNP	ACPT	NM_033068	human	genbank	57_37b	+1	reviewed	missense	c.720	p.L240F	0.998	superfamily_Phosphoglycerate mutase-like,HMMPfam_Acid_phosphat_A	superfamily_Phosphoglycerate mutase-like,HMMPfam_Acid_phosphat_A,PatternScan_HIS_ACID_PHOSPHAT_1,PatternScan_HIS_ACID_PHOSPHAT_2	-	no_errors	
ACSM1	116285	genome.wustl.edu	37	16	20648499	20648499	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	20648499	20648499	G	C	SNP	ACSM1	ENST00000219151	human	ensembl	57_37b	-1	known	missense	c.113	p.P38R	0.000	superfamily_SSF56801	superfamily_SSF56801,HMMPfam_AMP-binding	-	no_errors	
ADAR	103	genome.wustl.edu	37	1	154574808	154574808	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	154574808	154574808	G	A	SNP	ADAR	NM_001111	human	genbank	57_37b	-1	reviewed	missense	c.310	p.L104F	0.000	NULL	"superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00550,HMMPfam_z-alpha,superfamily_dsRNA-binding domain-like,HMMPfam_dsrm,HMMSmart_SM00358,HMMSmart_SM00552,HMMPfam_A_deamin"	-	no_errors	
ADPRH	141	genome.wustl.edu	37	3	119306587	119306587	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	119306587	119306587	C	A	SNP	ADPRH	NM_001125	human	genbank	57_37b	+1	reviewed	nonsense	c.936	p.C312*	1.000	superfamily_ADP-ribosylglycohydrolase,HMMPfam_ADP_ribosyl_GH	superfamily_ADP-ribosylglycohydrolase,HMMPfam_ADP_ribosyl_GH	-	no_errors	
AK2	204	genome.wustl.edu	37	1	33490155	33490155	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	33490155	33490155	G	C	SNP	AK2	NM_001625	human	genbank	57_37b	-1	reviewed	missense	c.107	p.A36G	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_ADK	"superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_ADK,PatternScan_ADENYLATE_KINASE,superfamily_Microbial and mitochondrial ADK insert ""zinc finger"" domain,HMMPfam_ADK_lid"	-	no_errors	
AKR1C4	1109	genome.wustl.edu	37	10	5248263	5248263	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	5248263	5248263	G	C	SNP	AKR1C4	NM_001818	human	genbank	57_37b	+1	reviewed	missense	c.473	p.G158A	0.994	superfamily_NAD(P)-linked oxidoreductase,HMMPfam_Aldo_ket_red,PatternScan_ALDOKETO_REDUCTASE_2	superfamily_NAD(P)-linked oxidoreductase,HMMPfam_Aldo_ket_red,PatternScan_ALDOKETO_REDUCTASE_1,PatternScan_ALDOKETO_REDUCTASE_2,PatternScan_ALDOKETO_REDUCTASE_3	-	no_errors	
ALDH1A2	8854	genome.wustl.edu	37	15	58357803	58357803	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	58357803	58357803	G	T	SNP	ALDH1A2	NM_003888	human	genbank	57_37b	-1	reviewed	missense	c.46	p.P16T	1.000	NULL	superfamily_ALDH-like,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_GLU,PatternScan_ALDEHYDE_DEHYDR_CYS	-	no_errors	
ALG10B	144245	genome.wustl.edu	37	12	38714741	38714741	+	Missense_Mutation	SNP	G	G	C	rs57963306	byCluster;by1000genomes	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	38714741	38714741	G	C	SNP	ALG10B	NM_001013620	human	genbank	57_37b	+1	validated	missense	c.1148	p.S383T	0.986	HMMPfam_DIE2_ALG10	HMMPfam_DIE2_ALG10	-		
ALMS1	7840	genome.wustl.edu	37	2	73677062	73677062	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	73677062	73677062	A	C	SNP	ALMS1	NM_015120	human	genbank	57_37b	+1	reviewed	silent	c.3405	p.T1135	0.000	NULL	NULL	-	no_errors	
ANAPC4	29945	genome.wustl.edu	37	4	25408876	25408876	+	Splice_Site	SNP	G	T	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	25408876	25408876	G	T	SNP	ANAPC4	NM_013367	human	genbank	57_37b	+1	reviewed	splice_site	c.1431+1	e19+1	1.000	-	-	-	no_errors	
ANK1	286	genome.wustl.edu	37	8	41530136	41530136	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	41530136	41530136	C	T	SNP	ANK1	NM_001142446	human	genbank	57_37b	-1	reviewed	missense	c.4955	p.R1652Q	0.994	NULL	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,HMMPfam_ZU5,HMMSmart_ZU5,HMMSmart_DEATH,superfamily_DEATH_like,HMMPfam_Death	-	no_errors	
AP2A1	160	genome.wustl.edu	37	19	50295317	50295317	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	50295317	50295317	A	G	SNP	AP2A1	NM_014203	human	genbank	57_37b	+1	reviewed	missense	c.599	p.H200R	1.000	superfamily_ARM repeat,HMMPfam_Adaptin_N	superfamily_ARM repeat,HMMPfam_Adaptin_N,superfamily_Clathrin adaptor appendage domain,HMMPfam_Alpha_adaptinC2,HMMSmart_SM00809,HMMPfam_Alpha_adaptin_C,superfamily_Subdomain of clathrin and coatomer appendage domain	-	no_errors	
AR	367	genome.wustl.edu	37	X	66931270	66931270	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	66931270	66931270	C	A	SNP	AR	NM_000044	human	genbank	57_37b	+1	reviewed	missense	c.1912	p.L638M	0.999	superfamily_Glucocorticoid receptor-like (DNA-binding domain)	HMMPfam_Androgen_recep,HMMSmart_SM00399,HMMPfam_zf-C4,superfamily_Glucocorticoid receptor-like (DNA-binding domain),PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors	
ARAP1	116985	genome.wustl.edu	37	11	72408055	72408055	+	Missense_Mutation	SNP	G	G	C	rs56200889	byCluster;byFrequency;by1000genomes	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	72408055	72408055	G	C	SNP	ARAP1	NM_001040118	human	genbank	57_37b	-1	reviewed	missense	c.3139	p.Q1047E	0.344	superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP	superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_Pyk2-associated protein beta ARF-GAP domain,HMMPfam_ArfGap,HMMSmart_SM00105,superfamily_GTPase activation domain GAP,HMMSmart_SM00324,HMMPfam_RhoGAP,HMMPfam_RA	-		
ARID1A	8289	genome.wustl.edu	37	1	27089688	27089688	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	27089688	27089688	G	T	SNP	ARID1A	NM_006015	human	genbank	57_37b	+1	reviewed	missense	c.2644	p.G882W	1.000	NULL	superfamily_ARID-like,HMMPfam_ARID,HMMSmart_SM00501	-	no_errors	
ASPHD1	253982	genome.wustl.edu	37	16	29913171	29913171	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	29913171	29913171	C	T	SNP	ASPHD1	NM_181718	human	genbank	57_37b	+1	validated	silent	c.879	p.S293	0.207	HMMPfam_Asp_Arg_Hydrox	HMMPfam_Asp_Arg_Hydrox,superfamily_SSF51197	-	no_errors	
BASP1	10409	genome.wustl.edu	37	5	17275511	17275511	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	17275511	17275511	C	T	SNP	BASP1	NM_006317	human	genbank	57_37b	+1	reviewed	silent	c.186	p.A62	0.024	HMMPfam_BASP1	HMMPfam_BASP1	-	no_errors	
BBS12	166379	genome.wustl.edu	37	4	123664820	123664820	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	123664820	123664820	G	C	SNP	BBS12	NM_152618	human	genbank	57_37b	+1	validated	silent	c.1773	p.L591	0.999	superfamily_GroEL equatorial domain-like,HMMPfam_Cpn60_TCP1	superfamily_GroEL equatorial domain-like,HMMPfam_Cpn60_TCP1,superfamily_GroEL apical domain-like	-	no_errors	
C10orf18	54906	genome.wustl.edu	37	10	5791187	5791187	+	Missense_Mutation	SNP	A	C	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	5791187	5791187	A	C	SNP	C10orf18	NM_017782	human	genbank	57_37b	+1	validated	missense	c.5803	p.K1935Q	0.242	NULL	NULL	-	no_errors	
C10orf25	220979	genome.wustl.edu	37	10	45495833	45495839	+	Frame_Shift_Del	DEL	ACTGAGC	ACTGAGC	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	ACTGAGC	ACTGAGC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	45495833	45495839	ACTGAGC	-	DEL	C10orf25	NM_001039380	human	genbank	57_37b	-1	validated	frame_shift_del	c.362_356	p.C119fs	0.000:0.000:0.000:0.000:0.001:0.002:0.002	NULL	NULL	(deletion:cds_exon[45495826,45495864])	no_errors	
C12orf51	283450	genome.wustl.edu	37	12	112677797	112677797	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	112677797	112677797	G	C	SNP	C12orf51	NM_001109662	human	genbank	57_37b	-1	provisional	missense	c.3727	p.Q1243E	1.000	NULL	superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	-	no_errors	
C13orf3	221150	genome.wustl.edu	37	13	21729839	21729839	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	21729839	21729839	C	G	SNP	C13orf3	ENST00000314759	human	ensembl	57_37b	-1	known	missense	c.1231	p.E411Q	1.000	NULL	NULL	-	no_errors	
C17orf68	80169	genome.wustl.edu	37	17	8141744	8141744	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	8141744	8141744	T	C	SNP	C17orf68	NM_025099	human	genbank	57_37b	-1	validated	missense	c.401	p.Y134C	0.998	NULL	NULL	-	no_errors	
C1orf174	339448	genome.wustl.edu	37	1	3807144	3807144	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	3807144	3807144	C	G	SNP	C1orf174	NM_207356	human	genbank	57_37b	-1	validated	missense	c.607	p.E203Q	0.997	NULL	NULL	-	no_errors	
C20orf117	140710	genome.wustl.edu	37	20	35445813	35445813	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	35445813	35445813	C	A	SNP	C20orf117	NM_199181	human	genbank	57_37b	-1	validated	silent	c.417	p.V139	0.014	NULL	NULL	-	no_errors	
C20orf95	343578	genome.wustl.edu	37	20	37267951	37267951	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	37267951	37267951	T	A	SNP	C20orf95	ENST00000373345	human	ensembl	57_37b	+1	known	missense	c.1042	p.L348M	0.883	superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	superfamily_Rho_GAP,HMMSmart_RhoGAP,HMMPfam_RhoGAP	-	no_errors	
C2CD3	26005	genome.wustl.edu	37	11	73829409	73829409	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	73829409	73829409	T	G	SNP	C2CD3	NM_015531	human	genbank	57_37b	-1	validated	missense	c.1384	p.S462R	0.991	NULL	HMMSmart_SM00239,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMPfam_C2	-	no_errors	
C3orf25	90288	genome.wustl.edu	37	3	129123000	129123000	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	129123000	129123000	C	T	SNP	C3orf25	ENST00000439888	human	ensembl	57_37b	-1	known	missense	c.974	p.R325H	0.000	NULL	superfamily_EF-hand	-	no_errors	
C4BPB	725	genome.wustl.edu	37	1	207265113	207265113	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	207265113	207265113	C	G	SNP	C4BPB	NM_000716	human	genbank	57_37b	+1	reviewed	missense	c.357	p.S119R	1.000	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-	no_errors	
C5orf36	285600	genome.wustl.edu	37	5	93798258	93798260	+	In_Frame_Del	DEL	TTG	TTG	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	TTG	TTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	93798258	93798260	TTG	-	DEL	C5orf36	NM_001145678	human	genbank	57_37b	-1	validated	in_frame_del	c.2080_2078	p.T693in_frame_del	1.000:0.999:1.000	NULL	NULL	(deletion:cds_exon[93798092,93798274])	no_errors	
C6orf25	80739	genome.wustl.edu	37	6	31691562	31691562	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	31691562	31691562	G	A	SNP	C6orf25	NM_138272	human	genbank	57_37b	+1	reviewed	missense	c.208	p.G70R	0.030	NULL	NULL	-	no_errors	
C9orf106	414318	genome.wustl.edu	37	9	132084262	132084262	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	132084262	132084262	C	T	SNP	C9orf106	NM_001012715	human	genbank	57_37b	+1	validated	missense	c.170	p.S57F	0.004	NULL	NULL	-	no_errors	
C9orf128	392307	genome.wustl.edu	37	9	35819000	35819000	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	35819000	35819000	C	T	SNP	C9orf128	ENST00000423537	human	ensembl	57_37b	-1	known	missense	c.1058	p.C353Y	0.310	NULL	NULL	-	no_errors	
CACNA2D1	781	genome.wustl.edu	37	7	81579759	81579767	+	In_Frame_Del	DEL	GATTCCAAT	GATTCCAAT	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	GATTCCAAT	GATTCCAAT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	81579759	81579767	GATTCCAAT	-	DEL	CACNA2D1	NM_000722	human	genbank	57_37b	-1	reviewed	in_frame_del	c.3225_3217	p.IGI1073in_frame_del	1.000:1.000:0.992:0.992:1.000:0.997:0.017:0.041:0.001	NULL	HMMPfam_VWA_N,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA,HMMPfam_Cache_1,HMMPfam_VGCC_alpha2	(deletion:cds_exon[81579708,81579824])	no_errors	
CAMK2G	818	genome.wustl.edu	37	10	75620617	75620617	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	75620617	75620617	A	G	SNP	CAMK2G	NM_172171	human	genbank	57_37b	-1	reviewed	missense	c.191	p.I64T	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,superfamily_SSF54427,HMMPfam_CaMKII_AD	-	no_errors	
CAPN8	388743	genome.wustl.edu	37	1	223717545	223717545	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	223717545	223717545	C	A	SNP	CAPN8	NM_001143962	human	genbank	57_37b	-1	validated	missense	c.1619	p.G540V	1.000	superfamily_EF-hand	superfamily_Cysteine proteinases,HMMSmart_SM00230,HMMPfam_Peptidase_C2,PatternScan_THIOL_PROTEASE_CYS,HMMPfam_Calpain_III,HMMSmart_SM00720,superfamily_Calpain large subunit middle domain (domain III),superfamily_EF-hand,PatternScan_EF_HAND_1	-	no_errors	
CARD14	79092	genome.wustl.edu	37	17	78157893	78157893	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	78157893	78157893	C	G	SNP	CARD14	NM_024110	human	genbank	57_37b	+1	reviewed	missense	c.531	p.H177Q	0.949	NULL	superfamily_DEATH domain,HMMPfam_CARD,superfamily_PDZ domain-like,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
CHD4	1108	genome.wustl.edu	37	12	6707089	6707089	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	6707089	6707089	C	T	SNP	CHD4	NM_001273	human	genbank	57_37b	-1	reviewed	nonsense	c.1863	p.W621*	1.000	HMMSmart_SM00298	HMMPfam_CHDNT,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,HMMSmart_SM00298,superfamily_Chromo domain-like,PatternScan_CHROMO_1,HMMPfam_Chromo,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C,HMMPfam_DUF1087,HMMPfam_DUF1086,HMMPfam_CHDCT2	-	no_errors	
CHI3L1	1116	genome.wustl.edu	37	1	203149664	203149664	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	203149664	203149664	G	A	SNP	CHI3L1	NM_001276	human	genbank	57_37b	-1	reviewed	silent	c.828	p.A276	0.988	HMMPfam_Glyco_hydro_18,HMMSmart_Glyco_18,superfamily_Glyco_hydro_cat,superfamily_SSF54556	PatternScan_CHITINASE_18,HMMPfam_Glyco_hydro_18,HMMSmart_Glyco_18,superfamily_Glyco_hydro_cat,superfamily_SSF54556	-	no_errors	
CLIP2	7461	genome.wustl.edu	37	7	73791030	73791030	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	73791030	73791030	G	A	SNP	CLIP2	NM_003388	human	genbank	57_37b	+1	reviewed	missense	c.2299	p.E767K	1.000	NULL	superfamily_Cap-Gly domain,HMMPfam_CAP_GLY,PatternScan_CAP_GLY_1	-	no_errors	
CLVS1	0	genome.wustl.edu	37	8	62412081	62412081	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	62412081	62412081	C	G	SNP	CLVS1	NM_173519	human	genbank	57_37b	+1	validated	missense	c.1045	p.P349A	1.000	NULL	superfamily_CRAL/TRIO N-terminal domain,HMMPfam_CRAL_TRIO_N,HMMPfam_CRAL_TRIO,superfamily_CRAL/TRIO domain,HMMSmart_SM00516	-	no_errors	
CNNM2	54805	genome.wustl.edu	37	10	104678350	104678350	+	Missense_Mutation	SNP	G	G	A	rs76057237	byCluster;byFrequency;by1000genomes	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	104678350	104678350	G	A	SNP	CNNM2	NM_017649	human	genbank	57_37b	+1	validated	missense	c.113	p.R38Q	1.000	NULL	HMMPfam_DUF21,HMMPfam_CBS	-		
CNTNAP1	8506	genome.wustl.edu	37	17	40840959	40840959	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	40840959	40840959	G	A	SNP	CNTNAP1	NM_003632	human	genbank	57_37b	+1	reviewed	missense	c.1522	p.E508K	1.000	superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	PatternScan_FIBRIN_AG_C_DOMAIN,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_FA58C,superfamily_Gal_bind_like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMSmart_EGF,HMMPfam_EGF,superfamily_Fibrinogen_a/b/g_C,HMMSmart_FBG,HMMSmart_4.1m	-	no_errors	
COL12A1	1303	genome.wustl.edu	37	6	75839836	75839836	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	75839836	75839836	G	A	SNP	COL12A1	NM_004370	human	genbank	57_37b	-1	reviewed	missense	c.6181	p.P2061S	1.000	HMMPfam_fn3,superfamily_Fibronectin type III,HMMSmart_SM00060	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III,superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00210,HMMPfam_Collagen	-	no_errors	
COL6A3	1293	genome.wustl.edu	37	2	238253387	238253387	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	238253387	238253387	A	G	SNP	COL6A3	NM_004369	human	genbank	57_37b	-1	reviewed	missense	c.7274	p.V2425A	0.127	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA	HMMSmart_SM00327,superfamily_vWA-like,HMMPfam_VWA,HMMPfam_Collagen,superfamily_Fibronectin type III,superfamily_BPTI-like,HMMSmart_SM00131,HMMPfam_Kunitz_BPTI,PatternScan_BPTI_KUNITZ_1	-	no_errors	
COX7B2	170712	genome.wustl.edu	37	4	46737103	46737103	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	46737103	46737103	T	C	SNP	COX7B2	NM_130902	human	genbank	57_37b	-1	validated	missense	c.107	p.D36G	1.000	HMMPfam_COX7B,superfamily_SSF81423	HMMPfam_COX7B,superfamily_SSF81423	-	no_errors	
CPZ	8532	genome.wustl.edu	37	4	8603072	8603072	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	8603072	8603072	G	C	SNP	CPZ	NM_001014447	human	genbank	57_37b	+1	reviewed	missense	c.344	p.R115P	0.009	HMMPfam_Fz,superfamily_Frizzled cysteine-rich domain,HMMSmart_SM00063	HMMPfam_Fz,superfamily_Frizzled cysteine-rich domain,HMMSmart_SM00063,superfamily_Zn-dependent exopeptidases,HMMPfam_Peptidase_M14,HMMSmart_SM00631,PatternScan_CARBOXYPEPT_ZN_2,superfamily_Carboxypeptidase regulatory domain	-	no_errors	
CRY1	1407	genome.wustl.edu	37	12	107391414	107391414	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	107391414	107391414	C	A	SNP	CRY1	NM_004075	human	genbank	57_37b	-1	validated	missense	c.1344	p.W448C	1.000	superfamily_Cryptochrome/photolyase FAD-binding domain,HMMPfam_FAD_binding_7	superfamily_Cryptochrome/photolyase N-terminal domain,HMMPfam_DNA_photolyase,superfamily_Cryptochrome/photolyase FAD-binding domain,HMMPfam_FAD_binding_7	-	no_errors	
CSMD1	64478	genome.wustl.edu	37	8	2857623	2857623	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	2857623	2857623	A	T	SNP	CSMD1	NM_033225	human	genbank	57_37b	-1	validated	missense	c.8063	p.V2688E	1.000	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032,PatternScan_GLYCOSYL_HYDROL_F10	-	no_errors	
CTNND2	1501	genome.wustl.edu	37	5	11364989	11364990	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	11364989	11364990	-	A	INS	CTNND2	NM_001332	human	genbank	57_37b	-1	validated	frame_shift_ins	c.1191_1190	p.S398fs	1.000:1.000	NULL	superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185	-	no_errors	
CXCR3	2833	genome.wustl.edu	37	X	70837027	70837027	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	70837027	70837027	C	T	SNP	CXCR3	NM_001504	human	genbank	57_37b	-1	reviewed	missense	c.295	p.D99N	0.981	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
CYP4F11	57834	genome.wustl.edu	37	19	16025600	16025600	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	16025600	16025600	C	G	SNP	CYP4F11	NM_001128932	human	genbank	57_37b	-1	reviewed	silent	c.1221	p.V407	0.007	superfamily_Cytochrome P450,HMMPfam_p450	superfamily_Cytochrome P450,HMMPfam_p450,PatternScan_CYTOCHROME_P450	-	no_errors	
DAB1	1600	genome.wustl.edu	37	1	57480646	57480646	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	57480646	57480646	C	A	SNP	DAB1	NM_021080	human	genbank	57_37b	-1	reviewed	missense	c.1354	p.V452L	1.000	NULL	superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID	-	no_errors	
DDX31	64794	genome.wustl.edu	37	9	135505736	135505736	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	135505736	135505736	G	A	SNP	DDX31	NM_022779	human	genbank	57_37b	-1	reviewed	missense	c.1861	p.R621W	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00490,HMMPfam_Helicase_C	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,PatternScan_DEAD_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors	
DENND5A	23258	genome.wustl.edu	37	11	9225258	9225258	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	9225258	9225258	G	A	SNP	DENND5A	NM_015213	human	genbank	57_37b	-1	validated	nonsense	c.898	p.Q300*	1.000	HMMPfam_DENN,HMMSmart_SM00799	HMMPfam_uDENN,HMMSmart_SM00800,HMMPfam_DENN,HMMSmart_SM00799,HMMPfam_dDENN,HMMSmart_SM00801,HMMPfam_RUN,HMMSmart_SM00593,superfamily_Lipase/lipooxygenase domain (PLAT/LH2 domain),HMMPfam_PLAT	-	no_errors	
DNAH10	196385	genome.wustl.edu	37	12	124320025	124320025	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124320025	124320025	C	T	SNP	DNAH10	NM_207437	human	genbank	57_37b	+1	validated	missense	c.4498	p.L1500F	1.000	HMMPfam_DHC_N2	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
DNAI1	27019	genome.wustl.edu	37	9	34500814	34500814	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	34500814	34500814	C	A	SNP	DNAI1	NM_012144	human	genbank	57_37b	+1	reviewed	silent	c.996	p.R332	1.000	superfamily_WD40_like	PatternScan_WD_REPEATS_1,superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	-	no_errors	
DOCK2	1794	genome.wustl.edu	37	5	169446012	169446013	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	169446012	169446013	-	T	INS	DOCK2	NM_004946	human	genbank	57_37b	+1	validated	frame_shift_ins	c.3281_3282	p.E1094fs	1.000:1.000	NULL	HMMSmart_SM00326,superfamily_SH3-domain,superfamily_Cytochrome c,HMMPfam_SH3_2	-	no_errors	
DOCK4	9732	genome.wustl.edu	37	7	111644188	111644193	+	Splice_Site	DEL	TGTAAA	TGTAAA	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	TGTAAA	TGTAAA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	111644188	111644193	TGTAAA	-	DEL	DOCK4	NM_014705	human	genbank	57_37b	-1	reviewed	splice_site_del	c.38-7_38-2	e2-2	1.000:0.995:0.875:0.885:0.738:0.306	-	-	(deletion:intron[111644187,111846156])	no_errors	
DYNC1LI2	1783	genome.wustl.edu	37	16	66766325	66766325	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	66766325	66766325	C	G	SNP	DYNC1LI2	NM_006141	human	genbank	57_37b	-1	validated	missense	c.846	p.L282F	1.000	HMMPfam_DLIC,superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_DLIC,superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
EBPL	84650	genome.wustl.edu	37	13	50237261	50237271	+	Frame_Shift_Del	DEL	CAGAATTTCCA	CAGAATTTCCA	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	CAGAATTTCCA	CAGAATTTCCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	50237261	50237271	CAGAATTTCCA	-	DEL	EBPL	NM_032565	human	genbank	57_37b	-1	validated	frame_shift_del	c.312_302	p.V101fs	0.996:0.997:0.989:0.977:0.998:0.995:0.999:1.000:1.000:1.000:0.997	HMMPfam_EBP	HMMPfam_EBP	(deletion:cds_exon[50237193,50237331])	no_errors	
ENPP4	22875	genome.wustl.edu	37	6	46108934	46108934	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	46108934	46108934	T	G	SNP	ENPP4	NM_014936	human	genbank	57_37b	+1	validated	missense	c.972	p.I324M	0.997	superfamily_Alkaline_phosphatase_core,HMMPfam_Phosphodiest	superfamily_Alkaline_phosphatase_core,HMMPfam_Phosphodiest	-	no_errors	
ENSG00000238105	0	genome.wustl.edu	37	12	100552747	100552747	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	100552747	100552747	G	A	SNP	ENSG00000238105	ENST00000429462	human	ensembl	57_37b	-1	known	missense	c.280	p.R94W	0.998	NULL	NULL	-	no_errors	
ENSG00000245360	0	genome.wustl.edu	37	19	19917502	19917502	+	RNA	DEL	A	A	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	19917502	19917502	A	-	DEL	ENSG00000245360	ENST00000499284	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.005	-	-	(deletion:rna[19916179,19918019])	no_errors	
ENSG00000245496	0	genome.wustl.edu	37	10	27540093	27540093	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	27540093	27540093	G	A	SNP	ENSG00000245496	ENST00000501900	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	
ENSG00000246985	0	genome.wustl.edu	37	12	93960917	93960917	+	RNA	SNP	G	C	C	rs10859532	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	93960917	93960917	G	C	SNP	ENSG00000246985	ENST00000500986	human	ensembl	57_37b	-1	novel	rna	NULL	NULL	0.001	-	-	-		
ENSG00000247256	0	genome.wustl.edu	37	13	28016508	28016508	+	RNA	SNP	A	G	G	rs78914361	byCluster;byFrequency;by1000genomes	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	28016508	28016508	A	G	SNP	ENSG00000247256	ENST00000500313	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-		
ENTPD7	57089	genome.wustl.edu	37	10	101455752	101455752	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	101455752	101455752	G	C	SNP	ENTPD7	NM_020354	human	genbank	57_37b	+1	validated	missense	c.883	p.G295R	1.000	HMMPfam_GDA1_CD39	HMMPfam_GDA1_CD39,PatternScan_GDA1_CD39_NTPASE	-	no_errors	
EPB41L3	23136	genome.wustl.edu	37	18	5434036	5434036	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	5434036	5434036	G	T	SNP	EPB41L3	NM_012307	human	genbank	57_37b	-1	provisional	silent	c.690	p.S230	0.998	HMMSmart_SM00295,superfamily_Second domain of FERM,HMMPfam_FERM_M	HMMSmart_SM00295,superfamily_Ubiquitin-like,HMMPfam_FERM_N,PatternScan_FERM_1,superfamily_Second domain of FERM,HMMPfam_FERM_M,PatternScan_FERM_2,superfamily_PH domain-like,HMMPfam_FERM_C,HMMPfam_FA,HMMPfam_SAB,HMMPfam_4_1_CTD	-	no_errors	
ESYT3	83850	genome.wustl.edu	37	3	138153870	138153870	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	138153870	138153870	G	A	SNP	ESYT3	NM_031913	human	genbank	57_37b	+1	validated	missense	c.230	p.R77H	0.995	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors	
EYS	346007	genome.wustl.edu	37	6	64436527	64436527	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	64436527	64436527	C	G	SNP	EYS	NM_001142800	human	genbank	57_37b	-1	reviewed	missense	c.8118	p.W2706C	1.000	superfamily_Concanavalin A-like lectins/glucanases	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00179,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors	
FABP2	2169	genome.wustl.edu	37	4	120243210	120243210	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	120243210	120243210	G	C	SNP	FABP2	NM_000134	human	genbank	57_37b	-1	reviewed	missense	c.48	p.D16E	0.985	superfamily_Lipocalins,HMMPfam_Lipocalin,PatternScan_FABP	superfamily_Lipocalins,HMMPfam_Lipocalin,PatternScan_FABP	-	no_errors	
FAM131B	9715	genome.wustl.edu	37	7	143054107	143054107	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	143054107	143054107	C	T	SNP	FAM131B	NM_001031690	human	genbank	57_37b	-1	validated	missense	c.619	p.A207T	0.985	NULL	NULL	-	no_errors	
FAM169A	26049	genome.wustl.edu	37	5	74109758	74109758	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	74109758	74109758	C	A	SNP	FAM169A	NM_015566	human	genbank	57_37b	-1	validated	missense	c.577	p.D193Y	1.000	NULL	NULL	-	no_errors	
FAM179A	165186	genome.wustl.edu	37	2	29259480	29259480	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	29259480	29259480	C	T	SNP	FAM179A	NM_199280	human	genbank	57_37b	+1	validated	missense	c.2492	p.A831V	0.011	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors	
FAM193B	54540	genome.wustl.edu	37	5	176963678	176963678	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	176963678	176963678	C	T	SNP	FAM193B	NM_019057	human	genbank	57_37b	-1	validated	missense	c.418	p.G140S	0.994	NULL	NULL	-	no_errors	
FAM5B	57795	genome.wustl.edu	37	1	177245552	177245552	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	177245552	177245552	C	A	SNP	FAM5B	NM_021165	human	genbank	57_37b	+1	provisional	silent	c.994	p.R332	0.938	NULL	HMMSmart_SM00457	-	no_errors	
FAT2	2196	genome.wustl.edu	37	5	150946624	150946624	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	150946624	150946624	G	A	SNP	FAT2	NM_001447	human	genbank	57_37b	-1	reviewed	silent	c.1869	p.R623	0.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,superfamily_EGF/Laminin,HMMSmart_SM00179,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2	-	no_errors	
FFAR3	2865	genome.wustl.edu	37	19	35862267	35862267	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	35862267	35862267	T	C	SNP	FFAR3	ENST00000246538	human	ensembl	57_37b	+1	known	silent	c.6	p.D2	0.002	NULL	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
FHAD1	114827	genome.wustl.edu	37	1	15707257	15707257	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	15707257	15707257	G	T	SNP	FHAD1	NM_052929	human	genbank	57_37b	+1	provisional	missense	c.3700	p.D1234Y	0.073	NULL	superfamily_SMAD/FHA domain,HMMSmart_SM00240,HMMPfam_FHA	-	no_errors	
FILIP1	27145	genome.wustl.edu	37	6	76022557	76022557	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	76022557	76022557	G	A	SNP	FILIP1	NM_015687	human	genbank	57_37b	-1	validated	silent	c.2991	p.G997	0.000	NULL	HMMPfam_CortBP2	-	no_errors	
FLJ42393	401105	genome.wustl.edu	37	3	187897954	187897954	+	RNA	SNP	T	T	A	rs2127519	byCluster;byFrequency;bySubmitter;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	187897954	187897954	T	A	SNP	FLJ42393	NR_024413	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.003	-	-	-		
FLJ45256	400511	genome.wustl.edu	37	16	24674395	24674396	+	RNA	INS	-	-	TG	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	24674395	24674396	-	TG	INS	FLJ45256	XR_041134	human	genbank	57_37b	-1	model	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	
GALNT5	11227	genome.wustl.edu	37	2	158114775	158114775	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	158114775	158114775	C	T	SNP	GALNT5	NM_014568	human	genbank	57_37b	+1	provisional	missense	c.181	p.P61S	0.997	NULL	superfamily_Nucleotide-diphospho-sugar transferases,PatternScan_ALPHA_2_MACROGLOBULIN,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,HMMSmart_SM00458,HMMPfam_Ricin_B_lectin	-	no_errors	
GPATCH8	23131	genome.wustl.edu	37	17	42475662	42475662	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	42475662	42475662	C	G	SNP	GPATCH8	NM_001002909	human	genbank	57_37b	-1	validated	missense	c.3783	p.Q1261H	0.033	NULL	HMMSmart_SM00443,HMMPfam_G-patch,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
GPS2	2874	genome.wustl.edu	37	17	7216985	7217004	+	Frame_Shift_Del	DEL	TGTCCATGCTCTGGTGTCCC	TGTCCATGCTCTGGTGTCCC	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	TGTCCATGCTCTGGTGTCCC	TGTCCATGCTCTGGTGTCCC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7216985	7217004	TGTCCATGCTCTGGTGTCCC	-	DEL	GPS2	NM_004489	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.536_517	p.G173fs	1.000:1.000:0.955:1.000:1.000:1.000:1.000:1.000:0.998:1.000:1.000:0.994:0.998:0.952:0.812:0.835:0.810:0.746:0.843:0.845	NULL	NULL	(deletion:cds_exon[7216887,7217040])	no_errors	
HKDC1	80201	genome.wustl.edu	37	10	71003105	71003105	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	71003105	71003105	A	C	SNP	HKDC1	NM_025130	human	genbank	57_37b	+1	validated	missense	c.859	p.N287H	1.000	HMMPfam_Hexokinase_2,superfamily_Actin-like ATPase domain	HMMPfam_Hexokinase_1,superfamily_Actin-like ATPase domain,HMMPfam_Hexokinase_2,PatternScan_HEXOKINASES	-	no_errors	
HOMER3	9454	genome.wustl.edu	37	19	19042357	19042357	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	19042357	19042357	C	-	DEL	HOMER3	NM_001145722	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.768	p.L257fs	0.071	NULL	superfamily_PH domain-like,HMMPfam_WH1,HMMSmart_SM00461	(deletion:cds_exon[19042318,19042434])	no_errors	
HSPG2	3339	genome.wustl.edu	37	1	22155911	22155911	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	22155911	22155911	C	-	DEL	HSPG2	ENST00000374695	human	ensembl	57_37b	-1	known	frame_shift_del	c.11957	p.G3986fs	0.800	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_1	HMMPfam_SEA,HMMSmart_SM00200,HMMPfam_Ldl_recept_a,superfamily_LDL receptor-like module,HMMSmart_SM00192,PatternScan_LDLRA_1,HMMSmart_SM00181,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406,HMMSmart_SM00281,HMMPfam_Laminin_B,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_EGF_LAM_1,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,HMMSmart_SM00179,HMMPfam_V-set,HMMPfam_ig,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMPfam_EGF,HMMPfam_Laminin_G_1	(deletion:cds_exon[22155876,22156097])	no_errors	
IGF2R	3482	genome.wustl.edu	37	6	160509069	160509069	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	160509069	160509069	C	G	SNP	IGF2R	NM_000876	human	genbank	57_37b	+1	reviewed	missense	c.6210	p.D2070E	0.931	HMMPfam_CIMR,superfamily_Mannose 6-phosphate receptor domain	superfamily_Mannose 6-phosphate receptor domain,HMMPfam_CIMR,superfamily_Kringle-like,HMMSmart_SM00059,HMMPfam_fn2,PatternScan_FN2_1	-	no_errors	
INPPL1	3636	genome.wustl.edu	37	11	71939469	71939469	+	Silent	SNP	C	C	T	rs1801031	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	71939469	71939469	C	T	SNP	INPPL1	NM_001567	human	genbank	57_37b	+1	reviewed	silent	c.324	p.G108	0.999	superfamily_SSF55550,HMMSmart_SH2	superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2,superfamily_Exo_endo_phos,HMMSmart_IPPc,HMMPfam_Exo_endo_phos,superfamily_SAM_homology,HMMSmart_SAM,HMMPfam_SAM_1	-		
INSR	3643	genome.wustl.edu	37	19	7122974	7122974	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	7122974	7122974	C	T	SNP	INSR	NM_000208	human	genbank	57_37b	-1	reviewed	silent	c.3285	p.K1095	0.997	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220	superfamily_L domain-like,HMMPfam_Recep_L_domain,HMMPfam_Furin-like,superfamily_Growth factor receptor domain,HMMSmart_SM00261,HMMSmart_SM00060,superfamily_Fibronectin type III,HMMPfam_fn3,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors	
IQCH	64799	genome.wustl.edu	37	15	67555536	67555536	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	67555536	67555536	C	T	SNP	IQCH	NM_001031715	human	genbank	57_37b	+1	validated	missense	c.251	p.T84I	0.003	NULL	HMMPfam_IQ	-	no_errors	
IRAK4	51135	genome.wustl.edu	37	12	44176156	44176156	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	44176156	44176156	T	G	SNP	IRAK4	NM_001114182	human	genbank	57_37b	+1	reviewed	missense	c.988	p.F330V	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220	superfamily_DEATH domain,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220	-	no_errors	
ITIH2	3698	genome.wustl.edu	37	10	7769757	7769757	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	7769757	7769757	G	C	SNP	ITIH2	NM_002216	human	genbank	57_37b	+1	validated	silent	c.1245	p.L415	1.000	superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA	HMMSmart_VIT,HMMPfam_VIT,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA,HMMPfam_ITI_HC_C	-	no_errors	
JAK2	3717	genome.wustl.edu	37	9	5022151	5022151	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	5022151	5022151	T	C	SNP	JAK2	NM_004972	human	genbank	57_37b	+1	reviewed	missense	c.164	p.L55P	0.650	HMMSmart_B41	PatternScan_FERM_1,PatternScan_FERM_2,HMMSmart_B41,superfamily_SSF55550,HMMSmart_SH2,HMMPfam_SH2,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
JMJD5	79831	genome.wustl.edu	37	16	27232004	27232004	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	27232004	27232004	G	A	SNP	JMJD5	NM_001145348	human	genbank	57_37b	+1	reviewed	missense	c.1318	p.V440M	1.000	superfamily_SSF51197,HMMSmart_JmjC	superfamily_SSF51197,HMMSmart_JmjC	-	no_errors	
KIAA0754	643314	genome.wustl.edu	37	1	39878587	39878587	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	39878587	39878587	C	G	SNP	KIAA0754	NM_015038	human	genbank	57_37b	+1	predicted	missense	c.2650	p.L884V	0.002	NULL	NULL	-	no_errors	
KIAA2013	90231	genome.wustl.edu	37	1	11982630	11982630	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	11982630	11982630	C	T	SNP	KIAA2013	ENST00000376576	human	ensembl	57_37b	-1	known	silent	c.1950	p.R650	0.006	NULL	HMMPfam_DUF2152	-	no_errors	
KLRAQ1	129285	genome.wustl.edu	37	2	48742007	48742007	+	RNA	SNP	A	A	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	48742007	48742007	A	G	SNP	KLRAQ1	NR_024188	human	genbank	57_37b	+1	validated	rna	NULL	NULL	0.001	-	-	-	no_errors	
KRT17	3872	genome.wustl.edu	37	17	39777038	39777038	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	39777038	39777038	G	T	SNP	KRT17	NM_000422	human	genbank	57_37b	-1	reviewed	missense	c.1054	p.Q352K	1.000	HMMPfam_Filament	HMMPfam_Filament,superfamily_Prefoldin,PatternScan_IF	-	no_errors	
LATS1	9113	genome.wustl.edu	37	6	149983176	149983176	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	149983176	149983176	G	C	SNP	LATS1	NM_004690	human	genbank	57_37b	-1	reviewed	missense	c.3082	p.P1028A	1.000	superfamily_Protein kinase-like (PK-like)	superfamily_UBA-like,HMMPfam_UBA,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,HMMPfam_Pkinase_C	-	no_errors	
LBR	3930	genome.wustl.edu	37	1	225599115	225599115	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	225599115	225599115	C	T	SNP	LBR	NM_002296	human	genbank	57_37b	-1	reviewed	missense	c.1112	p.G371D	1.000	HMMPfam_ERG4_ERG24,PatternScan_STEROL_REDUCT_1	HMMPfam_LBR_tudor,HMMSmart_TUDOR,HMMPfam_ERG4_ERG24,PatternScan_STEROL_REDUCT_1,PatternScan_STEROL_REDUCT_2	-	no_errors	
LCE1C	353133	genome.wustl.edu	37	1	152777833	152777833	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	152777833	152777833	G	A	SNP	LCE1C	NM_178351	human	genbank	57_37b	-1	validated	missense	c.122	p.S41F	1.000	NULL	NULL	-	no_errors	
LIG4	3981	genome.wustl.edu	37	13	108861606	108861606	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	108861606	108861606	C	T	SNP	LIG4	NM_001098268	human	genbank	57_37b	-1	reviewed	missense	c.2011	p.D671N	0.052	HMMPfam_BRCT,HMMSmart_BRCT,superfamily_BRCT	HMMPfam_DNA_ligase_A_N,superfamily_SSF56091,HMMPfam_DNA_ligase_A_M,PatternScan_DNA_LIGASE_A1,PatternScan_DNA_LIGASE_A2,HMMPfam_DNA_ligase_A_C,HMMPfam_BRCT,HMMSmart_BRCT,superfamily_BRCT	-	no_errors	
LIG4	3981	genome.wustl.edu	37	13	108862659	108862659	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	108862659	108862659	T	A	SNP	LIG4	NM_001098268	human	genbank	57_37b	-1	reviewed	nonsense	c.958	p.K320*	0.021	HMMPfam_DNA_ligase_A_M,superfamily_SSF56091	HMMPfam_BRCT,HMMSmart_BRCT,superfamily_BRCT,HMMPfam_DNA_ligase_A_N,HMMPfam_DNA_ligase_A_C,HMMPfam_DNA_ligase_A_M,PatternScan_DNA_LIGASE_A2,PatternScan_DNA_LIGASE_A1,superfamily_SSF56091	-	no_errors	
LOC202181	202181	genome.wustl.edu	37	5	177053476	177053476	+	RNA	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	177053476	177053476	C	G	SNP	LOC202181	NR_026921	human	genbank	57_37b	-1	predicted	rna	NULL	NULL	1.000	-	-	-	no_errors	
LRP6	4040	genome.wustl.edu	37	12	12334290	12334290	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	12334290	12334290	G	A	SNP	LRP6	NM_002336	human	genbank	57_37b	-1	reviewed	silent	c.1060	p.L354	0.974	superfamily_YWTD domain,HMMSmart_SM00135	superfamily_YWTD domain,HMMSmart_SM00135,HMMPfam_Ldl_recept_b,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_2,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1	-	no_errors	
LRRC28	123355	genome.wustl.edu	37	15	99874329	99874329	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	99874329	99874329	C	G	SNP	LRRC28	NM_144598	human	genbank	57_37b	+1	provisional	missense	c.587	p.P196R	1.000	superfamily_L domain-like,HMMSmart_SM00369	superfamily_L domain-like,HMMSmart_SM00364,HMMSmart_SM00369,HMMPfam_LRR_1	-	no_errors	
LRSAM1	90678	genome.wustl.edu	37	9	130245270	130245271	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	CT	CT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	130245270	130245271	CT	-	DEL	LRSAM1	NM_001005373	human	genbank	57_37b	+1	validated	frame_shift_del	c.1130_1131	p.T377fs	0.981:0.571	NULL	superfamily_L domain-like,HMMSmart_SM00364,HMMSmart_SM00369,HMMPfam_LRR_1,HMMSmart_SM00454,superfamily_SAM/Pointed domain,HMMPfam_SAM_2,superfamily_RING/U-box	(deletion:cds_exon[130245229,130245299])	no_errors	
LTBP1	4052	genome.wustl.edu	37	2	33518252	33518252	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	33518252	33518252	C	G	SNP	LTBP1	NM_206943	human	genbank	57_37b	+1	reviewed	missense	c.3141	p.N1047K	0.001	PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,superfamily_EGF/Laminin,HMMSmart_SM00181	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors	
MAD2L2	10459	genome.wustl.edu	37	1	11740518	11740519	+	In_Frame_Ins	INS	-	-	ATT	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	11740518	11740519	-	ATT	INS	MAD2L2	NM_001127325	human	genbank	57_37b	-1	reviewed	in_frame_ins	c.51_50	p.D17in_frame_insEI	0.940:1.000	superfamily_The spindle assembly checkpoint protein mad2,HMMPfam_HORMA	superfamily_The spindle assembly checkpoint protein mad2,HMMPfam_HORMA	-	no_errors	
MAG	4099	genome.wustl.edu	37	19	35802828	35802828	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	35802828	35802828	G	A	SNP	MAG	NM_002361	human	genbank	57_37b	+1	reviewed	missense	c.1624	p.V542M	0.986	NULL	HMMPfam_V-set,superfamily_SSF48726,HMMSmart_IG,HMMPfam_C2-set_2,HMMPfam_I-set,HMMSmart_IGc2,HMMPfam_ig	-	no_errors	
MAGI2	9863	genome.wustl.edu	37	7	77764386	77764386	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	77764386	77764386	T	A	SNP	MAGI2	NM_012301	human	genbank	57_37b	-1	reviewed	missense	c.2983	p.I995F	1.000	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMSmart_SM00072,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_GUANYLATE_KINASE_1,HMMPfam_Guanylate_kin,superfamily_WW domain,HMMSmart_SM00456,HMMPfam_WW,PatternScan_WW_DOMAIN_1	-	no_errors	
MAP1A	4130	genome.wustl.edu	37	15	43819341	43819350	+	Frame_Shift_Del	DEL	GCAGGAGGGG	GCAGGAGGGG	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	GCAGGAGGGG	GCAGGAGGGG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	43819341	43819350	GCAGGAGGGG	-	DEL	MAP1A	NM_002373	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.5670_5679	p.E1892fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:0.997	NULL	superfamily_Metallo-hydrolase/oxidoreductase	(deletion:cds_exon[43813672,43821706])	no_errors	
MAST3	23031	genome.wustl.edu	37	19	18254639	18254639	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	18254639	18254639	C	T	SNP	MAST3	NM_015016	human	genbank	57_37b	+1	validated	silent	c.2319	p.P773	0.992	NULL	PatternScan_PROTEIN_KINASE_ATP,HMMPfam_DUF1908,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,superfamily_PDZ,HMMSmart_PDZ,HMMPfam_PDZ	-	no_errors	
MCAM	4162	genome.wustl.edu	37	11	119183561	119183561	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	119183561	119183561	G	C	SNP	MCAM	NM_006500	human	genbank	57_37b	-1	validated	missense	c.658	p.Q220E	0.986	superfamily_Immunoglobulin,HMMPfam_C2-set_2,HMMSmart_SM00409	HMMPfam_V-set,HMMSmart_SM00409,superfamily_Immunoglobulin,HMMPfam_C2-set_2,HMMSmart_SM00408,HMMPfam_ig	-	no_errors	
MCOLN2	255231	genome.wustl.edu	37	1	85405236	85405236	+	Silent	SNP	C	T	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	85405236	85405236	C	T	SNP	MCOLN2	NM_153259	human	genbank	57_37b	-1	reviewed	silent	c.1110	p.K370	1.000	HMMPfam_Ion_trans	HMMPfam_Ion_trans	-	no_errors	
MDN1	23195	genome.wustl.edu	37	6	90397097	90397097	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	90397097	90397097	G	A	SNP	MDN1	NM_014611	human	genbank	57_37b	-1	provisional	nonsense	c.11416	p.Q3806*	1.000	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,superfamily_vWA-like,HMMSmart_SM00327	-	no_errors	
MEFV	4210	genome.wustl.edu	37	16	3293337	3293337	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3293337	3293337	C	T	SNP	MEFV	NM_000243	human	genbank	57_37b	-1	reviewed	missense	c.2150	p.R717H	0.028	HMMPfam_SPRY,HMMSmart_SM00449	superfamily_DEATH domain,HMMPfam_PAAD_DAPIN,HMMPfam_zf-B_box,HMMSmart_SM00336,superfamily_B-box zinc-binding domain,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors	
METTL8	79828	genome.wustl.edu	37	2	172195922	172195922	+	Missense_Mutation	SNP	T	A	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	172195922	172195922	T	A	SNP	METTL8	ENST00000375258	human	ensembl	57_37b	-1	known	missense	c.378	p.R126S	0.027	superfamily_S-adenosyl-L-methionine-dependent methyltransferases	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_12	-	no_errors	
MGRN1	23295	genome.wustl.edu	37	16	4723519	4723519	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4723519	4723519	C	G	SNP	MGRN1	NM_015246	human	genbank	57_37b	+1	validated	missense	c.816	p.S272R	0.988	superfamily_SSF57850	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4	-	no_errors	
MLL3	58508	genome.wustl.edu	37	7	151860091	151860091	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	151860091	151860091	A	G	SNP	MLL3	NM_170606	human	genbank	57_37b	-1	reviewed	missense	c.10571	p.V3524A	0.069	NULL	PatternScan_HMGI_Y,HMMPfam_AT_hook,HMMSmart_SM00249,superfamily_FYVE/PHD zinc finger,HMMPfam_PHD,HMMSmart_SM00184,PatternScan_ZF_PHD_1,PatternScan_ATPASE_ALPHA_BETA,HMMSmart_SM00398,HMMPfam_HMG_box,HMMPfam_FYRN,HMMSmart_SM00541,HMMPfam_FYRC,HMMSmart_SM00542,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors	
MMP15	4324	genome.wustl.edu	37	16	58077431	58077431	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	58077431	58077431	C	T	SNP	MMP15	NM_002428	human	genbank	57_37b	+1	reviewed	silent	c.1470	p.N490	0.633	superfamily_Hemopexin,HMMPfam_Hemopexin,HMMSmart_HX	HMMPfam_PG_binding_1,superfamily_PGBD_like,PatternScan_CYSTEINE_SWITCH,HMMSmart_ZnMc,superfamily_SSF55486,HMMPfam_Peptidase_M10,PatternScan_ZINC_PROTEASE,superfamily_Hemopexin,HMMPfam_Hemopexin,HMMSmart_HX,PatternScan_HEMOPEXIN	-	no_errors	
MRC2	9902	genome.wustl.edu	37	17	60749168	60749168	+	Missense_Mutation	SNP	C	G	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	60749168	60749168	C	G	SNP	MRC2	NM_006039	human	genbank	57_37b	+1	validated	missense	c.1276	p.L426V	1.000	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	superfamily_Ricin B-like lectins,HMMSmart_SM00458,HMMPfam_Ricin_B_lectin,superfamily_Kringle-like,HMMSmart_SM00059,HMMPfam_fn2,PatternScan_FN2_1,superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1,PatternScan_LIPOCALIN	-	no_errors	
MSRB3	253827	genome.wustl.edu	37	12	65720647	65720647	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	65720647	65720647	C	A	SNP	MSRB3	NM_198080	human	genbank	57_37b	+1	validated	missense	c.139	p.Q47K	1.000	superfamily_Mss4_like,HMMPfam_SelR	superfamily_Mss4_like,HMMPfam_SelR	-	no_errors	
MTSS1	9788	genome.wustl.edu	37	8	125601952	125601952	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	125601952	125601952	G	T	SNP	MTSS1	NM_014751	human	genbank	57_37b	-1	validated	missense	c.294	p.S98R	0.996	HMMPfam_IMD	HMMPfam_IMD,HMMPfam_WH2	-	no_errors	
MYH6	4624	genome.wustl.edu	37	14	23857373	23857373	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23857373	23857373	G	C	SNP	MYH6	NM_002471	human	genbank	57_37b	-1	validated	missense	c.4350	p.N1450K	1.000	HMMPfam_Myosin_tail_1,superfamily_Prefoldin	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,superfamily_Prefoldin,HMMPfam_Myosin_tail_1	-	no_errors	
MYO16	23026	genome.wustl.edu	37	13	109617177	109617177	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	109617177	109617177	C	A	SNP	MYO16	NM_015011	human	genbank	57_37b	+1	validated	missense	c.2230	p.L744M	0.294	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,HMMPfam_IQ	-	no_errors	
MYO5C	55930	genome.wustl.edu	37	15	52497266	52497266	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	52497266	52497266	C	T	SNP	MYO5C	NM_018728	human	genbank	57_37b	-1	validated	missense	c.4616	p.S1539N	1.000	NULL	superfamily_Myosin S1 fragment N-terminal domain,HMMSmart_SM00242,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Myosin_head,HMMSmart_SM00015,HMMPfam_IQ,HMMPfam_DIL	-	no_errors	
NAGLU	4669	genome.wustl.edu	37	17	40695472	40695472	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	40695472	40695472	A	G	SNP	NAGLU	NM_000263	human	genbank	57_37b	+1	reviewed	missense	c.1448	p.Y483C	1.000	HMMPfam_NAGLU	HMMPfam_NAGLU	-	no_errors	
NEK10	152110	genome.wustl.edu	37	3	27233594	27233594	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	27233594	27233594	G	C	SNP	NEK10	ENST00000396636	human	ensembl	57_37b	-1	known	missense	c.2431	p.R811G	1.000	superfamily_Protein kinase-like (PK-like)	superfamily_ARM repeat,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
NHLH1	4807	genome.wustl.edu	37	1	160340790	160340790	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	160340790	160340790	C	T	SNP	NHLH1	NM_005598	human	genbank	57_37b	+1	validated	missense	c.269	p.A90V	1.000	superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_HLH,HMMSmart_SM00353	superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_HLH,HMMSmart_SM00353	-	no_errors	
NHSL1	57224	genome.wustl.edu	37	6	138751578	138751578	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	138751578	138751578	C	A	SNP	NHSL1	NM_001144060	human	genbank	57_37b	-1	validated	missense	c.3904	p.D1302Y	0.065	NULL	NULL	-	no_errors	
NLRC5	84166	genome.wustl.edu	37	16	57115479	57115490	+	In_Frame_Del	DEL	CTGGCTGAAGGA	CTGGCTGAAGGA	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	CTGGCTGAAGGA	CTGGCTGAAGGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	57115479	57115490	CTGGCTGAAGGA	-	DEL	NLRC5	NM_032206	human	genbank	57_37b	+1	validated	in_frame_del	c.5446_5457	p.EGLA1818in_frame_del	0.955:0.997:1.000:1.000:0.998:0.982:0.991:0.998:1.000:1.000:1.000:0.994	superfamily_RNI-like,HMMSmart_SM00368	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT,superfamily_RNI-like,HMMSmart_SM00367,HMMSmart_SM00368,HMMPfam_LRR_1	(deletion:cds_exon[57115439,57115522])	no_errors	
NLRP2	55655	genome.wustl.edu	37	19	55493680	55493680	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	55493680	55493680	T	C	SNP	NLRP2	NM_017852	human	genbank	57_37b	+1	provisional	missense	c.614	p.F205S	0.074	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_DEATH domain,HMMPfam_PAAD_DAPIN,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_NACHT,superfamily_RNI-like,HMMSmart_SM00368	-	no_errors	
NOS1	4842	genome.wustl.edu	37	12	117681129	117681129	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	117681129	117681129	C	G	SNP	NOS1	NM_000620	human	genbank	57_37b	-1	reviewed	missense	c.2935	p.V979L	1.000	superfamily_Riboflavin synthase domain-like	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_Nitric oxide (NO) synthase oxygenase domain,HMMPfam_NO_synthase,PatternScan_NOS,superfamily_Flavoproteins,HMMPfam_Flavodoxin_1,superfamily_Riboflavin synthase domain-like,HMMPfam_FAD_binding_1,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain,HMMPfam_NAD_binding_1	-	no_errors	
NPFFR2	10886	genome.wustl.edu	37	4	73012701	73012701	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	73012701	73012701	G	C	SNP	NPFFR2	NM_004885	human	genbank	57_37b	+1	reviewed	missense	c.741	p.Q247H	0.573	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
NRG1	3084	genome.wustl.edu	37	8	32621347	32621347	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	32621347	32621347	G	T	SNP	NRG1	NM_013956	human	genbank	57_37b	+1	reviewed	silent	c.1365	p.S455	0.985	HMMPfam_Neuregulin	superfamily_SSF48726,HMMSmart_IGc2,HMMPfam_ig,superfamily_SSF57196,HMMSmart_EGF,HMMPfam_EGF,PatternScan_EGF_1,HMMPfam_Neuregulin	-	no_errors	
NRP1	8829	genome.wustl.edu	37	10	33475378	33475378	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	33475378	33475378	G	A	SNP	NRP1	NM_003873	human	genbank	57_37b	-1	validated	nonsense	c.2101	p.Q701*	1.000	HMMSmart_SM00137,HMMPfam_MAM,PatternScan_MAM_1	superfamily_Spermadhesin CUB domain,HMMPfam_CUB,HMMSmart_SM00042,superfamily_Galactose-binding domain-like,HMMSmart_SM00231,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,HMMSmart_SM00137,HMMPfam_MAM,PatternScan_MAM_1	-	no_errors	
NTRK1	4914	genome.wustl.edu	37	1	156843468	156843468	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156843468	156843468	C	G	SNP	NTRK1	NM_002529	human	genbank	57_37b	+1	reviewed	missense	c.894	p.H298Q	1.000	superfamily_Immunoglobulin	superfamily_L domain-like,HMMSmart_SM00082,superfamily_Immunoglobulin,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,PatternScan_RECEPTOR_TYR_KIN_II	-	no_errors	
ODZ4	26011	genome.wustl.edu	37	11	78380642	78380642	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	78380642	78380642	C	A	SNP	ODZ4	NM_001098816	human	genbank	57_37b	-1	validated	missense	c.6748	p.D2250Y	1.000	NULL	HMMPfam_Ten_N,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_EGF,HMMPfam_EGF_2,superfamily_SSF57196,superfamily_SSF101898,superfamily_TolB_C,HMMPfam_NHL,HMMPfam_RHS_repeat	-	no_errors	
OPN4	94233	genome.wustl.edu	37	10	88422113	88422113	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	88422113	88422113	T	C	SNP	OPN4	NM_001030015	human	genbank	57_37b	+1	validated	missense	c.1211	p.L404P	0.227	NULL	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1,PatternScan_OPSIN	-	no_errors	
OR13C9	286362	genome.wustl.edu	37	9	107380041	107380041	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	107380041	107380041	A	T	SNP	OR13C9	NM_001001956	human	genbank	57_37b	-1	provisional	missense	c.445	p.W149R	0.999	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR2B3	442184	genome.wustl.edu	37	6	29055004	29055004	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	29055004	29055004	A	G	SNP	OR2B3	NM_001005226	human	genbank	57_37b	-1	validated	missense	c.22	p.S8P	0.008	superfamily_Family A G protein-coupled receptor-like	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR2T12	127064	genome.wustl.edu	37	1	248458059	248458059	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248458059	248458059	G	A	SNP	OR2T12	NM_001004692	human	genbank	57_37b	-1	provisional	silent	c.822	p.A274	0.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR2T34	127068	genome.wustl.edu	37	1	248737734	248737734	+	Missense_Mutation	SNP	G	G	A	rs946770	byCluster	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	248737734	248737734	G	A	SNP	OR2T34	NM_001001821	human	genbank	57_37b	-1	provisional	missense	c.325	p.H109Y	0.000	superfamily_SSF81321,HMMPfam_7tm_1	superfamily_SSF81321,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-		
OR4C13	283092	genome.wustl.edu	37	11	49974137	49974137	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	49974137	49974137	T	A	SNP	OR4C13	NM_001001955	human	genbank	57_37b	+1	validated	missense	c.163	p.S55T	0.001	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors	
OR52K2	119774	genome.wustl.edu	37	11	4471322	4471322	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	4471322	4471322	A	T	SNP	OR52K2	NM_001005172	human	genbank	57_37b	+1	validated	missense	c.753	p.L251F	0.072	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OR56A1	120796	genome.wustl.edu	37	11	6048683	6048683	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	6048683	6048683	G	A	SNP	OR56A1	NM_001001917	human	genbank	57_37b	-1	validated	silent	c.252	p.V84	0.731	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors	
OR5T1	390155	genome.wustl.edu	37	11	56043743	56043743	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	56043743	56043743	T	C	SNP	OR5T1	NM_001004745	human	genbank	57_37b	+1	provisional	missense	c.629	p.L210P	0.001	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
OVGP1	5016	genome.wustl.edu	37	1	111963924	111963924	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	111963924	111963924	G	C	SNP	OVGP1	NM_002557	human	genbank	57_37b	-1	reviewed	missense	c.877	p.Q293E	1.000	HMMPfam_Glyco_hydro_18,HMMSmart_SM00636,superfamily_(Trans)glycosidases,superfamily_Chitinase insertion domain	HMMPfam_Glyco_hydro_18,HMMSmart_SM00636,superfamily_(Trans)glycosidases,superfamily_Chitinase insertion domain	-	no_errors	
PAQR5	54852	genome.wustl.edu	37	15	69652466	69652466	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	69652466	69652466	C	G	SNP	PAQR5	NM_001104554	human	genbank	57_37b	+1	validated	missense	c.47	p.P16R	1.000	NULL	HMMPfam_HlyIII	-	no_errors	
PCDHGA4	56111	genome.wustl.edu	37	5	140736102	140736102	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140736102	140736102	C	A	SNP	PCDHGA4	NM_018917	human	genbank	57_37b	+1	reviewed	silent	c.1335	p.I445	0.904	HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Cadherin-like	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHGB1	56104	genome.wustl.edu	37	5	140731702	140731702	+	Silent	SNP	G	A	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140731702	140731702	G	A	SNP	PCDHGB1	NM_018922	human	genbank	57_37b	+1	reviewed	silent	c.1875	p.A625	0.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCMT1	5110	genome.wustl.edu	37	6	150092324	150092324	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	150092324	150092324	G	C	SNP	PCMT1	NM_005389	human	genbank	57_37b	+1	validated	missense	c.82	p.V28L	1.000	HMMPfam_PCMT,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_PCMT,superfamily_S-adenosyl-L-methionine-dependent methyltransferases,PatternScan_PCMT	-	no_errors	
PDZD4	57595	genome.wustl.edu	37	X	153070217	153070217	+	Missense_Mutation	SNP	C	T	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	153070217	153070217	C	T	SNP	PDZD4	NM_032512	human	genbank	57_37b	-1	provisional	missense	c.901	p.E301K	0.887	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228	-	no_errors	
PHF3	23469	genome.wustl.edu	37	6	64422056	64422056	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	64422056	64422056	A	C	SNP	PHF3	NM_015153	human	genbank	57_37b	+1	provisional	missense	c.4572	p.K1524N	0.000	NULL	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,PatternScan_ZF_PHD_1,superfamily_Elongation factor TFIIS domain 2,HMMPfam_TFIIS_M,HMMSmart_SM00510,HMMPfam_SPOC	-	no_errors	
PIK3R6	146850	genome.wustl.edu	37	17	8741904	8741904	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	8741904	8741904	T	A	SNP	PIK3R6	ENST00000311434	human	ensembl	57_37b	-1	known	missense	c.166	p.I56F	0.981	HMMPfam_PI3K_1B_p101	HMMPfam_PI3K_1B_p101	-	no_errors	
PKHD1L1	93035	genome.wustl.edu	37	8	110520355	110520355	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	110520355	110520355	C	T	SNP	PKHD1L1	NM_177531	human	genbank	57_37b	+1	validated	missense	c.11257	p.L3753F	1.000	NULL	superfamily_E set domains,HMMSmart_SM00429,HMMPfam_TIG,HMMSmart_SM00758,superfamily_Anthrax protective antigen,HMMSmart_SM00710,superfamily_Cupredoxins,HMMPfam_G8,superfamily_Pectin lyase-like	-	no_errors	
PKNOX1	5316	genome.wustl.edu	37	21	44438269	44438269	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	44438269	44438269	G	A	SNP	PKNOX1	NM_004571	human	genbank	57_37b	+1	validated	missense	c.649	p.V217I	0.997	NULL	superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox	-	no_errors	
PLCB1	23236	genome.wustl.edu	37	20	8719944	8719944	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	8719944	8719944	G	A	SNP	PLCB1	NM_015192	human	genbank	57_37b	+1	reviewed	missense	c.2245	p.V749I	1.000	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	superfamily_EF-hand,HMMPfam_efhand_like,HMMSmart_SM00148,HMMPfam_PI-PLC-X,superfamily_PLC-like phosphodiesterases,HMMPfam_PI-PLC-Y,HMMSmart_SM00149,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2,HMMPfam_PLC-beta_C	-	no_errors	
PLCD3	113026	genome.wustl.edu	37	17	43190567	43190567	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	43190567	43190567	T	A	SNP	PLCD3	ENST00000322765	human	ensembl	57_37b	-1	known	missense	c.2051	p.D684V	1.000	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	superfamily_PH domain-like,HMMSmart_SM00233,superfamily_EF-hand,PatternScan_EF_HAND_1,HMMPfam_efhand_like,HMMSmart_SM00148,HMMPfam_PI-PLC-X,superfamily_PLC-like phosphodiesterases,HMMPfam_PI-PLC-Y,HMMSmart_SM00149,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors	
POLA1	5422	genome.wustl.edu	37	X	25014005	25014005	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	25014005	25014005	C	T	SNP	POLA1	NM_016937	human	genbank	57_37b	+1	validated	nonsense	c.4327	p.R1443*	0.009	HMMPfam_zf-DNA_Pol	superfamily_RNaseH_fold,HMMPfam_DNA_pol_B_exo,HMMSmart_POLBc,superfamily_SSF56672,HMMPfam_DNA_pol_B,PatternScan_DNA_POLYMERASE_B,HMMPfam_zf-DNA_Pol,superfamily_SSF90234	-	no_errors	
POLR3GL	84265	genome.wustl.edu	37	1	145457935	145457935	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	145457935	145457935	C	G	SNP	POLR3GL	NM_032305	human	genbank	57_37b	-1	provisional	missense	c.325	p.D109H	1.000	NULL	NULL	-	no_errors	
PPP2R4	5524	genome.wustl.edu	37	9	131890307	131890307	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	131890307	131890307	G	C	SNP	PPP2R4	NM_178001	human	genbank	57_37b	+1	reviewed	missense	c.281	p.C94S	0.000	HMMPfam_PTPA	HMMPfam_PTPA	-	no_errors	
PPP2R5D	5528	genome.wustl.edu	37	6	42977150	42977150	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	42977150	42977150	C	A	SNP	PPP2R5D	NM_006245	human	genbank	57_37b	+1	reviewed	missense	c.1342	p.P448T	1.000	HMMPfam_B56	HMMPfam_B56	-	no_errors	
PRKCG	5582	genome.wustl.edu	37	19	54401697	54401697	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	54401697	54401697	A	C	SNP	PRKCG	NM_002739	human	genbank	57_37b	+1	reviewed	missense	c.1096	p.M366L	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP	superfamily_SSF57889,HMMSmart_C1,PatternScan_ZF_DAG_PE_1,HMMPfam_C1_1,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_C2,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST,HMMSmart_S_TK_X,HMMPfam_Pkinase_C	-	no_errors	
PRUNE	58497	genome.wustl.edu	37	1	150999788	150999788	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	150999788	150999788	A	C	SNP	PRUNE	NM_021222	human	genbank	57_37b	+1	provisional	silent	c.759	p.I253	0.941	superfamily_DHH phosphoesterases,HMMPfam_DHHA2	HMMPfam_DHH,superfamily_DHH phosphoesterases,HMMPfam_DHHA2,PatternScan_GLYCOSYL_HYDROL_F5	-	no_errors	
PSMA6	5687	genome.wustl.edu	37	14	35778201	35778201	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	35778201	35778201	G	T	SNP	PSMA6	NM_002791	human	genbank	57_37b	+1	reviewed	missense	c.253	p.A85S	1.000	superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases),HMMPfam_Proteasome	superfamily_N-terminal nucleophile aminohydrolases (Ntn hydrolases),HMMPfam_Proteasome_A_N,PatternScan_PROTEASOME_A,HMMPfam_Proteasome	-	no_errors	
PTDSS1	9791	genome.wustl.edu	37	8	97285557	97285557	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	97285557	97285557	G	T	SNP	PTDSS1	NM_014754	human	genbank	57_37b	+1	provisional	missense	c.210	p.W70C	1.000	NULL	HMMPfam_PSS	-	no_errors	
RCN1	5954	genome.wustl.edu	37	11	32122121	32122121	+	Missense_Mutation	SNP	G	G	A	rs35942383	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	32122121	32122121	G	A	SNP	RCN1	NM_002901	human	genbank	57_37b	+1	reviewed	missense	c.655	p.G219R	0.998	superfamily_SSF47473,HMMSmart_EFh,PatternScan_EF_HAND_1	superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1,PatternScan_ER_TARGET	-		
RHCE	6006	genome.wustl.edu	37	1	25747153	25747153	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	25747153	25747153	T	A	SNP	RHCE	NM_020485	human	genbank	57_37b	-1	reviewed	missense	c.125	p.K42M	0.000	HMMPfam_Ammonium_transp,superfamily_Ammonium ransporter (Pfam 00909)	HMMPfam_Ammonium_transp,superfamily_Ammonium ransporter (Pfam 00909)	-	no_errors	
RHD	6007	genome.wustl.edu	37	1	25599163	25599163	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	25599163	25599163	A	T	SNP	RHD	NM_016124	human	genbank	57_37b	+1	reviewed	missense	c.125	p.K42M	0.001	HMMPfam_Ammonium_transp,superfamily_Ammonium ransporter (Pfam 00909)	HMMPfam_Ammonium_transp,superfamily_Ammonium ransporter (Pfam 00909)	-	no_errors	
RIPK3	11035	genome.wustl.edu	37	14	24808794	24808794	+	Silent	SNP	A	T	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	24808794	24808794	A	T	SNP	RIPK3	NM_006871	human	genbank	57_37b	-1	reviewed	silent	c.30	p.G10	0.000	superfamily_Protein kinase-like (PK-like)	superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
ROGDI	79641	genome.wustl.edu	37	16	4848160	4848160	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	4848160	4848160	G	T	SNP	ROGDI	NM_024589	human	genbank	57_37b	-1	provisional	missense	c.557	p.S186Y	0.044	HMMPfam_Rogdi_lz	HMMPfam_Rogdi_lz	-	no_errors	
RPRD2	23248	genome.wustl.edu	37	1	150443698	150443698	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	150443698	150443698	C	T	SNP	RPRD2	NM_015203	human	genbank	57_37b	+1	validated	silent	c.2274	p.S758	1.000	NULL	superfamily_ENTH/VHS domain,HMMSmart_SM00582,HMMPfam_DUF618	-	no_errors	
RTP2	344892	genome.wustl.edu	37	3	187419769	187419769	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	187419769	187419769	G	C	SNP	RTP2	NM_001004312	human	genbank	57_37b	-1	validated	missense	c.148	p.Q50E	1.000	NULL	NULL	-	no_errors	
RYR3	6263	genome.wustl.edu	37	15	33990151	33990151	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	33990151	33990151	C	T	SNP	RYR3	NM_001036	human	genbank	57_37b	+1	validated	missense	c.6203	p.T2068M	1.000	HMMPfam_RYDR_ITPR	HMMPfam_Ins145_P3_rec,HMMSmart_SM00472,HMMPfam_MIR,superfamily_MIR domain (Pfam 02815),HMMPfam_RYDR_ITPR,HMMPfam_SPRY,HMMSmart_SM00449,HMMPfam_RyR,HMMPfam_RIH_assoc,HMMPfam_efhand,superfamily_EF-hand,HMMPfam_RR_TM4-6,HMMPfam_Ion_trans	-	no_errors	
SGSM2	9905	genome.wustl.edu	37	17	2265536	2265536	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	2265536	2265536	G	C	SNP	SGSM2	NM_014853	human	genbank	57_37b	+1	validated	missense	c.430	p.V144L	1.000	HMMPfam_RUN,HMMSmart_RUN	HMMPfam_RUN,HMMSmart_RUN,superfamily_RabGAP_TBC,HMMSmart_TBC,HMMPfam_TBC	-	no_errors	
SLAMF9	89886	genome.wustl.edu	37	1	159923329	159923329	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	159923329	159923329	A	G	SNP	SLAMF9	NM_033438	human	genbank	57_37b	-1	reviewed	missense	c.161	p.I54T	0.397	superfamily_Immunoglobulin	superfamily_Immunoglobulin	-	no_errors	
SLC10A3	8273	genome.wustl.edu	37	X	153716489	153716489	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	153716489	153716489	G	-	DEL	SLC10A3	NM_001142392	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.791	p.S264fs	0.272	HMMPfam_SBF	HMMPfam_SBF	(deletion:cds_exon[153715846,153717279])	no_errors	
SLC10A3	8273	genome.wustl.edu	37	X	153716700	153716700	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	153716700	153716700	A	-	DEL	SLC10A3	NM_001142392	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.580	p.Y194fs	1.000	NULL	HMMPfam_SBF	(deletion:cds_exon[153715846,153717279])	no_errors	
SLC13A1	6561	genome.wustl.edu	37	7	122769492	122769492	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	122769492	122769492	G	A	SNP	SLC13A1	NM_022444	human	genbank	57_37b	-1	validated	nonsense	c.976	p.Q326*	1.000	HMMPfam_Na_sulph_symp	HMMPfam_Na_sulph_symp,PatternScan_NA_SULFATE	-	no_errors	
SLC16A12	387700	genome.wustl.edu	37	10	91195821	91195821	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	91195821	91195821	G	A	SNP	SLC16A12	NM_213606	human	genbank	57_37b	-1	validated	silent	c.1194	p.I398	0.816	superfamily_MFS_gen_substrate_transporter	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors	
SLC22A15	55356	genome.wustl.edu	37	1	116574176	116574176	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	116574176	116574176	A	T	SNP	SLC22A15	NM_018420	human	genbank	57_37b	+1	validated	silent	c.918	p.G306	0.957	superfamily_MFS general substrate transporter	superfamily_MFS general substrate transporter,HMMPfam_Sugar_tr	-	no_errors	
SLC35A2	7355	genome.wustl.edu	37	X	48767129	48767129	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	48767129	48767129	C	-	DEL	SLC35A2	NM_005660	human	genbank	57_37b	-1	provisional	frame_shift_del	c.236	p.G79fs	0.997	NULL	superfamily_Multidrug resistance efflux transporter EmrE,HMMPfam_Nuc_sug_transp	(deletion:cds_exon[48767091,48767273])	no_errors	
SLC3A2	6520	genome.wustl.edu	37	11	62656079	62656079	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	62656079	62656079	C	G	SNP	SLC3A2	NM_001012661	human	genbank	57_37b	+1	reviewed	missense	c.1900	p.R634G	0.823	superfamily_Glycosyl hydrolase domain	superfamily_(Trans)glycosidases,HMMSmart_SM00642,HMMPfam_Alpha-amylase,superfamily_Glycosyl hydrolase domain	-	no_errors	
SLC45A2	51151	genome.wustl.edu	37	5	33954536	33954536	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	33954536	33954536	C	G	SNP	SLC45A2	NM_016180	human	genbank	57_37b	-1	reviewed	missense	c.962	p.C321S	1.000	superfamily_MFS general substrate transporter	superfamily_MFS general substrate transporter	-	no_errors	
SNX20	124460	genome.wustl.edu	37	16	50707855	50707855	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	50707855	50707855	A	G	SNP	SNX20	NM_182854	human	genbank	57_37b	-1	validated	missense	c.413	p.V138A	0.462	superfamily_PX domain,HMMPfam_PX,HMMSmart_SM00312	superfamily_PX domain,HMMPfam_PX,HMMSmart_SM00312	-	no_errors	
SPEN	23013	genome.wustl.edu	37	1	16247478	16247478	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	16247478	16247478	G	T	SNP	SPEN	NM_015001	human	genbank	57_37b	+1	reviewed	missense	c.1749	p.K583N	1.000	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1	superfamily_SSF54928,HMMSmart_RRM,HMMPfam_RRM_1,superfamily_SPOC-like,HMMPfam_SPOC	-	no_errors	
SPTBN2	6712	genome.wustl.edu	37	11	66455691	66455691	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	66455691	66455691	G	T	SNP	SPTBN2	NM_006946	human	genbank	57_37b	-1	reviewed	missense	c.6323	p.P2108H	0.695	HMMSmart_SM00150	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors	
SREBF2	6721	genome.wustl.edu	37	22	42273963	42273963	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	42273963	42273963	G	C	SNP	SREBF2	NM_004599	human	genbank	57_37b	+1	reviewed	missense	c.1597	p.D533H	1.000	NULL	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH	-	no_errors	
STK31	56164	genome.wustl.edu	37	7	23751906	23751906	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	23751906	23751906	G	T	SNP	STK31	NM_031414	human	genbank	57_37b	+1	reviewed	splice_site	c.150+1	e3+1	1.000	-	-	-	no_errors	
STRADA	92335	genome.wustl.edu	37	17	61787935	61787935	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	61787935	61787935	C	T	SNP	STRADA	NM_001003787	human	genbank	57_37b	-1	reviewed	missense	c.497	p.G166D	1.000	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase	-	no_errors	
STRN4	29888	genome.wustl.edu	37	19	47231375	47231375	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	47231375	47231375	G	A	SNP	STRN4	ENST00000435164	human	ensembl	57_37b	-1	known	missense	c.691	p.L231F	0.028	NULL	HMMPfam_Striatin	-	no_errors	
SYNE2	23224	genome.wustl.edu	37	14	64600895	64600895	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	64600895	64600895	G	C	SNP	SYNE2	NM_182914	human	genbank	57_37b	+1	reviewed	missense	c.14623	p.V4875L	0.031	HMMSmart_SPEC	superfamily_Calponin-homology,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_CH,PatternScan_ACTININ_2,superfamily_Spectrin,HMMSmart_SPEC,HMMPfam_Spectrin,superfamily_4_helix_cytokine,HMMPfam_KASH	-	no_errors	
TCTN2	79867	genome.wustl.edu	37	12	124189164	124189164	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124189164	124189164	C	T	SNP	TCTN2	NM_024809	human	genbank	57_37b	+1	validated	silent	c.1698	p.I566	0.999	NULL	HMMPfam_DUF1619	-	no_errors	
TMED6	146456	genome.wustl.edu	37	16	69381693	69381693	+	Nonsense_Mutation	SNP	C	A	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	69381693	69381693	C	A	SNP	TMED6	NM_144676	human	genbank	57_37b	-1	validated	nonsense	c.487	p.E163*	0.993	HMMPfam_EMP24_GP25L	HMMPfam_EMP24_GP25L	-	no_errors	
TMEM223	79064	genome.wustl.edu	37	11	62559273	62559274	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	62559273	62559274	-	C	INS	TMEM223	NM_001080501	human	genbank	57_37b	-1	validated	frame_shift_ins	c.194_193	p.A65fs	0.004:0.005	NULL	NULL	-	no_errors	
TMEM41B	440026	genome.wustl.edu	37	11	9316935	9316935	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	9316935	9316935	C	G	SNP	TMEM41B	NM_015012	human	genbank	57_37b	-1	validated	splice_site	c.240-1	e3-1	1.000	-	-	-	no_errors	
TMEM74	157753	genome.wustl.edu	37	8	109796471	109796471	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	109796471	109796471	G	A	SNP	TMEM74	NM_153015	human	genbank	57_37b	-1	provisional	missense	c.857	p.T286M	0.001	NULL	NULL	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7577539	7577539	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7577539	7577539	G	A	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.742	p.R248W	1.000	HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TRIO	7204	genome.wustl.edu	37	5	14492843	14492843	+	Silent	SNP	C	G	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	14492843	14492843	C	G	SNP	TRIO	NM_007118	human	genbank	57_37b	+1	validated	silent	c.7800	p.P2600	0.972	superfamily_SH3-domain,HMMSmart_SM00326	superfamily_CRAL/TRIO domain,HMMSmart_SM00516,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_Spectrin repeat,superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
UBE2J1	51465	genome.wustl.edu	37	6	90045035	90045035	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	90045035	90045035	G	C	SNP	UBE2J1	NM_016021	human	genbank	57_37b	-1	reviewed	missense	c.544	p.Q182E	1.000	NULL	PatternScan_UBIQUITIN_CONJUGAT_1,superfamily_UBQ-conjugat/RWD-like,HMMSmart_UBCc,HMMPfam_UQ_con	-	no_errors	
UGT1A8	54576	genome.wustl.edu	37	2	234526443	234526443	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	234526443	234526443	A	C	SNP	UGT1A8	NM_019076	human	genbank	57_37b	+1	reviewed	silent	c.90	p.V30	0.573	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT,PatternScan_UDPGT	-	no_errors	
USH2A	7399	genome.wustl.edu	37	1	216138717	216138717	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	216138717	216138717	G	C	SNP	USH2A	NM_206933	human	genbank	57_37b	-1	reviewed	silent	c.7062	p.R2354	0.132	superfamily_Fibronectin type III,HMMSmart_SM00060	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00560,HMMSmart_SM00136,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_LAM_1,PatternScan_EGF_1,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors	
VPRBP	9730	genome.wustl.edu	37	3	51450832	51450832	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	51450832	51450832	G	A	SNP	VPRBP	NM_014703	human	genbank	57_37b	-1	validated	nonsense	c.3781	p.Q1261*	1.000	superfamily_WD40 repeat-like	superfamily_ARM repeat,HMMSmart_SM00667,HMMPfam_LisH,superfamily_WD40 repeat-like	-	no_errors	
VPS4B	9525	genome.wustl.edu	37	18	61071015	61071015	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	61071015	61071015	C	G	SNP	VPS4B	NM_004869	human	genbank	57_37b	-1	reviewed	missense	c.409	p.A137P	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMSmart_SM00745,HMMPfam_MIT,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,HMMPfam_Vps4_C	-	no_errors	
WDR26	80232	genome.wustl.edu	37	1	224612368	224612368	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	224612368	224612368	G	A	SNP	WDR26	ENST00000366852	human	ensembl	57_37b	-1	known	silent	c.633	p.F211	1.000	NULL	HMMSmart_LisH	-	no_errors	
WHSC1	7468	genome.wustl.edu	37	4	1936971	1936971	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	1936971	1936971	C	G	SNP	WHSC1	NM_001042424	human	genbank	57_37b	+1	reviewed	missense	c.1656	p.D552E	1.000	NULL	superfamily_Tudor/PWWP/MBT,HMMPfam_PWWP,HMMSmart_SM00293,superfamily_HMG-box,HMMSmart_SM00398,HMMPfam_HMG_box,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00249,HMMPfam_PHD,HMMSmart_SM00184,PatternScan_ZF_PHD_1,superfamily_SET domain,HMMSmart_SM00570,HMMPfam_SET,HMMSmart_SM00317,HMMSmart_SM00508	-	no_errors	
WTAP	9589	genome.wustl.edu	37	6	160164787	160164787	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	160164787	160164787	G	A	SNP	WTAP	NM_004906	human	genbank	57_37b	+1	reviewed	missense	c.236	p.R79Q	0.974	NULL	NULL	-	no_errors	
ZBTB10	65986	genome.wustl.edu	37	8	81399784	81399784	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	81399784	81399784	C	G	SNP	ZBTB10	NM_001105539	human	genbank	57_37b	+1	validated	missense	c.739	p.Q247E	0.999	NULL	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_zf-C2H2,HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF233	353355	genome.wustl.edu	37	19	44771096	44771096	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	44771096	44771096	C	T	SNP	ZNF233	NM_181756	human	genbank	57_37b	+1	provisional	nonsense	c.220	p.Q74*	0.000	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF423	23090	genome.wustl.edu	37	16	49764856	49764856	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	49764856	49764856	C	G	SNP	ZNF423	NM_015069	human	genbank	57_37b	-1	reviewed	missense	c.103	p.D35H	0.998	NULL	HMMSmart_ZnF_C2H2,superfamily_SSF57667,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF518A	9849	genome.wustl.edu	37	10	97919091	97919091	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	97919091	97919091	G	C	SNP	ZNF518A	ENST00000371192	human	ensembl	57_37b	+1	known	silent	c.3012	p.V1004	0.001	NULL	HMMSmart_SM00355,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
ZNF544	27300	genome.wustl.edu	37	19	58773426	58773426	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	58773426	58773426	C	T	SNP	ZNF544	NM_014480	human	genbank	57_37b	+1	provisional	missense	c.1454	p.T485M	0.002	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF646	9726	genome.wustl.edu	37	16	31089275	31089275	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	31089275	31089275	G	A	SNP	ZNF646	NM_014699	human	genbank	57_37b	+1	validated	missense	c.1630	p.A544T	0.001	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF862	0	genome.wustl.edu	37	7	149558861	149558861	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149558861	149558861	C	T	SNP	ZNF862	NM_001099220	human	genbank	57_37b	+1	provisional	missense	c.2612	p.T871M	0.079	NULL	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,HMMSmart_SM00597,HMMPfam_hATC	-	no_errors	
ZNF90	7643	genome.wustl.edu	37	19	20229739	20229739	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A07R-01A-21W-A050-09	TCGA-A8-A07R-10B-01D-A047-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	20229739	20229739	G	C	SNP	ZNF90	NM_007138	human	genbank	57_37b	+1	validated	missense	c.1376	p.G459A	0.997	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
