Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
AARS	16	genome.wustl.edu	37	16	70287177	70287177	+	Silent	SNP	A	A	G	rs4081753	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	70287177	70287177	A	G	SNP	AARS	NM_001605	human	genbank	57_37b	-1	reviewed	silent	c.2715	p.V905	0.990	HMMPfam_DHHA1	superfamily_SSF55681,HMMPfam_tRNA-synt_2c,superfamily_Ala-tRNA-synth_IIc_anticod-bd,superfamily_Thr/Ala-tRNA-synth_IIc_edit,HMMPfam_tRNA_SAD,HMMPfam_DHHA1	-		
ALDH4A1	8659	genome.wustl.edu	37	1	19203997	19203997	+	Silent	SNP	C	C	G	rs2230705	byCluster;byFrequency;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	19203997	19203997	C	G	SNP	ALDH4A1	NM_003748	human	genbank	57_37b	-1	reviewed	silent	c.1050	p.A350	1.000	superfamily_Aldehyde_DH/Histidinol_DH,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_CYS	superfamily_Aldehyde_DH/Histidinol_DH,HMMPfam_Aldedh,PatternScan_ALDEHYDE_DEHYDR_GLU,PatternScan_ALDEHYDE_DEHYDR_CYS	-		
COL7A1	1294	genome.wustl.edu	37	3	48625266	48625266	+	Silent	SNP	T	T	C	rs1264194	byCluster;byFrequency;bySubmitter;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	48625266	48625266	T	C	SNP	COL7A1	NM_000094	human	genbank	57_37b	-1	reviewed	silent	c.2817	p.P939	0.000	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III,HMMPfam_Collagen,superfamily_BPTI-like,HMMPfam_Kunitz_BPTI,PatternScan_BPTI_KUNITZ_1	-		
ENSG00000196696	0	genome.wustl.edu	37	16	70045828	70045828	+	Silent	SNP	T	T	C	rs929841	byCluster;by2Hit2Allele;byHapMap	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	70045828	70045828	T	C	SNP	ENSG00000196696	ENST00000325845	human	ensembl	57_37b	-1	known	silent	c.1206	p.P402	0.334	superfamily_PLP-dependent transferases	superfamily_PLP-dependent transferases,HMMPfam_Pyridoxal_deC	-		
ENSG00000247702	0	genome.wustl.edu	37	21	34017857	34017857	+	RNA	SNP	T	T	A	rs2406	byCluster;byFrequency;bySubmitter;by2Hit2Allele;byHapMap;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	34017857	34017857	T	A	SNP	ENSG00000247702	ENST00000500615	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.000	-	-	-		
GPRIN2	9721	genome.wustl.edu	37	10	46999863	46999863	+	Missense_Mutation	SNP	C	C	G	rs4445576	byCluster;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	46999863	46999863	C	G	SNP	GPRIN2	NM_014696	human	genbank	57_37b	+1	validated	missense	c.983	p.S328C	0.016	NULL	NULL	-		
HCFC1R1	54985	genome.wustl.edu	37	16	3073240	3073240	+	Missense_Mutation	SNP	G	G	T	rs10508	byCluster;byFrequency;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3073240	3073240	G	T	SNP	HCFC1R1	NM_001002018	human	genbank	57_37b	-1	validated	missense	c.275	p.P92Q	0.960	NULL	NULL	-		
KCNG4	93107	genome.wustl.edu	37	16	84256225	84256225	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	84256225	84256225	G	A	SNP	KCNG4	NM_172347	human	genbank	57_37b	-1	reviewed	silent	c.1158	p.S386	0.889	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_POZ domain,HMMPfam_K_tetra,superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors	
KLHL36	79786	genome.wustl.edu	37	16	84695280	84695280	+	Silent	SNP	A	A	G	rs17755815	byCluster;byFrequency;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	84695280	84695280	A	G	SNP	KLHL36	NM_024731	human	genbank	57_37b	+1	provisional	silent	c.1392	p.L464	0.973	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_BACK,superfamily_Galactose oxidase central domain,HMMSmart_SM00612,HMMPfam_Kelch_1	-		
LAMA1	284217	genome.wustl.edu	37	18	7012123	7012123	+	Silent	SNP	A	A	G	rs9946794	byCluster;byHapMap;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	7012123	7012123	A	G	SNP	LAMA1	NM_005559	human	genbank	57_37b	-1	validated	silent	c.3378	p.G1126	0.018	superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_LAM_1	HMMSmart_SM00136,HMMPfam_Laminin_N,superfamily_Galactose-binding domain-like,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_Concanavalin A-like lectins/glucanases,PatternScan_EGF_1,PatternScan_EGF_LAM_1,HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_EGF_2,HMMSmart_SM00281,HMMPfam_Laminin_B,HMMPfam_Laminin_I,HMMPfam_Laminin_II,HMMSmart_SM00282,HMMPfam_Laminin_G_1,HMMPfam_Laminin_G_2	-		
LOC100289574	0	genome.wustl.edu	37	16	32191941	32191941	+	Missense_Mutation	SNP	C	C	T	rs77427075	byCluster;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	32191941	32191941	C	T	SNP	LOC100289574	XM_002343438	human	genbank	57_37b	-1	model	missense	c.265	p.G89S	1.000	NULL	NULL	-		
LRRC50	123872	genome.wustl.edu	37	16	84199513	84199513	+	Silent	SNP	C	C	A	rs112191420	by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	84199513	84199513	C	A	SNP	LRRC50	NM_178452	human	genbank	57_37b	+1	validated	silent	c.988	p.R330	0.002	NULL	superfamily_Outer arm dynein light chain 1,HMMSmart_SM00365,HMMPfam_LRR_1	-		
POM121C	0	genome.wustl.edu	37	7	75051375	75051375	+	Silent	SNP	T	C	C	rs398016	byCluster	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	75051375	75051375	T	C	SNP	POM121C	NM_001099415	human	genbank	57_37b	-1	validated	silent	c.2160	p.P720	0.002	NULL	NULL	-		
RPGRIP1L	23322	genome.wustl.edu	37	16	53674978	53674978	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	53674978	53674978	T	C	SNP	RPGRIP1L	NM_015272	human	genbank	57_37b	-1	reviewed	silent	c.2925	p.V975	0.986	NULL	superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors	
SLC25A22	79751	genome.wustl.edu	37	11	793588	793588	+	Silent	SNP	G	G	A	rs80335370	byCluster;byFrequency;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	793588	793588	G	A	SNP	SLC25A22	NM_024698	human	genbank	57_37b	-1	provisional	silent	c.234	p.P78	0.878	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-		
SLC38A7	55238	genome.wustl.edu	37	16	58713798	58713798	+	Missense_Mutation	SNP	G	G	A	rs7191331	byCluster;byFrequency;by2Hit2Allele;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	58713798	58713798	G	A	SNP	SLC38A7	NM_018231	human	genbank	57_37b	-1	provisional	missense	c.233	p.T78I	0.996	HMMPfam_Aa_trans	HMMPfam_Aa_trans	-		
SLC38A8	146167	genome.wustl.edu	37	16	84050212	84050212	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	84050212	84050212	C	T	SNP	SLC38A8	NM_001080442	human	genbank	57_37b	-1	provisional	silent	c.1074	p.T358	0.405	HMMPfam_Aa_trans	HMMPfam_Aa_trans	-	no_errors	
WWP2	11060	genome.wustl.edu	37	16	69970329	69970329	+	Silent	SNP	A	A	G	rs1983016	byCluster;byFrequency;byHapMap;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	69970329	69970329	A	G	SNP	WWP2	NM_007014	human	genbank	57_37b	+1	reviewed	silent	c.2091	p.T697	0.000	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT	HMMPfam_C2,HMMSmart_C2,HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP,superfamily_C2_CaLB	-		
WWP2	11060	genome.wustl.edu	37	16	69973825	69973825	+	Silent	SNP	G	G	A	rs3748389	byCluster;byFrequency;by1000genomes	TCGA-A8-A08C-01A-11W-A019-09	TCGA-A8-A08C-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	69973825	69973825	G	A	SNP	WWP2	NM_007014	human	genbank	57_37b	+1	reviewed	silent	c.2595	p.E865	1.000	HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT	HMMPfam_C2,HMMSmart_C2,HMMPfam_HECT,HMMSmart_HECTc,superfamily_HECT,HMMPfam_WW,HMMSmart_WW,PatternScan_WW_DOMAIN_1,superfamily_WW_Rsp5_WWP,superfamily_C2_CaLB	-		
