Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ADAMTSL1	92949	genome.wustl.edu	37	9	18474248	18474248	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	18474248	18474248	G	C	SNP	ADAMTSL1	NM_001040272	human	genbank	57_37b	+1	validated	silent	c.18	p.R6	1.000	NULL	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_I-set,HMMPfam_PLAC	-	no_errors	
ADCY10	55811	genome.wustl.edu	37	1	167791335	167791335	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	167791335	167791335	G	A	SNP	ADCY10	NM_018417	human	genbank	57_37b	-1	reviewed	nonsense	c.4213	p.Q1405*	0.001	superfamily_TPR-like	superfamily_Adenylyl and guanylyl cyclase catalytic domain,HMMPfam_Guanylate_cyc,superfamily_TPR-like	-	no_errors	
ANKFY1	51479	genome.wustl.edu	37	17	4111293	4111293	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	4111293	4111293	G	A	SNP	ANKFY1	NM_016376	human	genbank	57_37b	-1	validated	missense	c.667	p.H223Y	1.000	superfamily_ANK	HMMPfam_BTB,HMMSmart_BTB,superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,superfamily_FYVE_PHD_ZnF,HMMSmart_FYVE,HMMPfam_FYVE	-	no_errors	
ANKRD13C	81573	genome.wustl.edu	37	1	70781223	70781223	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	70781223	70781223	G	A	SNP	ANKRD13C	NM_030816	human	genbank	57_37b	-1	validated	nonsense	c.604	p.Q202*	1.000	superfamily_Ankyrin repeat,HMMSmart_SM00248	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank	-	no_errors	
ANKRD40	91369	genome.wustl.edu	37	17	48784939	48784939	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	48784939	48784939	A	C	SNP	ANKRD40	NM_052855	human	genbank	57_37b	-1	validated	missense	c.77	p.V26G	1.000	HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ank	HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ank	-	no_errors	
ANKRD50	57182	genome.wustl.edu	37	4	125593162	125593162	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	125593162	125593162	T	A	SNP	ANKRD50	NM_020337	human	genbank	57_37b	-1	validated	nonsense	c.1270	p.K424*	1.000	NULL	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK	-	no_errors	
ANKRD6	22881	genome.wustl.edu	37	6	90340379	90340379	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	90340379	90340379	G	A	SNP	ANKRD6	NM_014942	human	genbank	57_37b	+1	validated	missense	c.1825	p.V609I	0.023	NULL	HMMSmart_SM00248,superfamily_Ankyrin repeat,HMMPfam_Ank	-	no_errors	
APOB	338	genome.wustl.edu	37	2	21232270	21232270	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	21232270	21232270	G	T	SNP	APOB	NM_000384	human	genbank	57_37b	-1	reviewed	silent	c.7470	p.T2490	0.000	NULL	superfamily_Lipovitellin-phosvitin complex beta-sheet shell regions,HMMPfam_Vitellogenin_N,HMMSmart_SM00638,superfamily_Lipovitellin-phosvitin complex superhelical domain,HMMPfam_DUF1943,HMMPfam_DUF1081	-	no_errors	
ATP13A5	344905	genome.wustl.edu	37	3	193044787	193044787	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	193044787	193044787	G	C	SNP	ATP13A5	NM_198505	human	genbank	57_37b	-1	provisional	missense	c.1521	p.N507K	1.000	superfamily_SSF81665,superfamily_SSF81660	superfamily_SSF81665,HMMPfam_Cation_ATPase_N,HMMPfam_E1-E2_ATPase,superfamily_SSF81653,PatternScan_ATPASE_E1_E2,superfamily_SSF81660,superfamily_SSF56784	-	no_errors	
ATXN7L1	222255	genome.wustl.edu	37	7	105260645	105260645	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	105260645	105260645	A	T	SNP	ATXN7L1	NM_020725	human	genbank	57_37b	-1	validated	splice_site	c.1517+2	e9+2	1.000	-	-	-	no_errors	
B3GAT1	27087	genome.wustl.edu	37	11	134253872	134253872	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	134253872	134253872	G	T	SNP	B3GAT1	NM_018644	human	genbank	57_37b	-1	reviewed	missense	c.323	p.T108K	1.000	superfamily_SSF53448,HMMPfam_Glyco_transf_43	superfamily_SSF53448,HMMPfam_Glyco_transf_43	-	no_errors	
BAG3	9531	genome.wustl.edu	37	10	121429661	121429662	+	Frame_Shift_Del	DEL	CC	CC	-	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	CC	CC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	121429661	121429662	CC	-	DEL	BAG3	NM_004281	human	genbank	57_37b	+1	reviewed	frame_shift_del	c.479_480	p.Q161fs	0.176:0.104	NULL	superfamily_WW_Rsp5_WWP,HMMSmart_WW,HMMPfam_WW,PatternScan_WW_DOMAIN_1,superfamily_SSF63491,HMMPfam_BAG,HMMSmart_BAG	(deletion:cds_exon[121429363,121429689])	no_errors	
BEND6	221336	genome.wustl.edu	37	6	56857343	56857343	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	56857343	56857343	C	A	SNP	BEND6	NM_152731	human	genbank	57_37b	+1	validated	silent	c.288	p.V96	0.998	NULL	HMMPfam_BEN	-	no_errors	
BRWD1	54014	genome.wustl.edu	37	21	40571202	40571202	+	Nonsense_Mutation	SNP	C	C	A	rs4561736	byHapMap	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	40571202	40571202	C	A	SNP	BRWD1	NM_018963	human	genbank	57_37b	-1	reviewed	nonsense	c.5140	p.E1714*	0.574	superfamily_WD40 repeat-like	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMSmart_SM00297,superfamily_Bromodomain,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-		
BTBD17	388419	genome.wustl.edu	37	17	72352875	72352875	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	72352875	72352875	T	A	SNP	BTBD17	NM_001080466	human	genbank	57_37b	-1	provisional	missense	c.1358	p.E453V	1.000	NULL	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,HMMPfam_BACK	-	no_errors	
BTN1A1	696	genome.wustl.edu	37	6	26509208	26509208	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	26509208	26509208	T	G	SNP	BTN1A1	NM_001732	human	genbank	57_37b	+1	validated	missense	c.1387	p.W463G	0.696	HMMPfam_SPRY,HMMSmart_SM00449	superfamily_Immunoglobulin,HMMPfam_V-set,HMMSmart_SM00409,HMMSmart_SM00406,HMMPfam_C2-set_2,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors	
C12orf12	196477	genome.wustl.edu	37	12	91347376	91347376	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	91347376	91347376	T	A	SNP	C12orf12	NM_152638	human	genbank	57_37b	-1	predicted	missense	c.1144	p.T382S	0.000	NULL	NULL	-	no_errors	
C17orf95	124512	genome.wustl.edu	37	17	74729704	74729704	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	74729704	74729704	C	G	SNP	C17orf95	NM_001080510	human	genbank	57_37b	+1	predicted	missense	c.509	p.S170C	0.999	NULL	superfamily_S-adenosyl-L-methionine-dependent methyltransferases,HMMPfam_Methyltransf_16	-	no_errors	
C20orf106	200232	genome.wustl.edu	37	20	55101071	55101071	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	55101071	55101071	C	G	SNP	C20orf106	NM_001012971	human	genbank	57_37b	+1	validated	missense	c.461	p.A154G	0.000	NULL	NULL	-	no_errors	
C2orf16	84226	genome.wustl.edu	37	2	27802013	27802013	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	27802013	27802013	G	C	SNP	C2orf16	NM_032266	human	genbank	57_37b	+1	validated	silent	c.2574	p.G858	0.000	NULL	NULL	-	no_errors	
C4orf42	92070	genome.wustl.edu	37	4	1244492	1244492	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	1244492	1244492	G	C	SNP	C4orf42	ENST00000357591	human	ensembl	57_37b	+1	known	missense	c.131	p.S44T	0.004	NULL	NULL	-	no_errors	
C6orf142	90523	genome.wustl.edu	37	6	53986383	53986383	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	53986383	53986383	C	G	SNP	C6orf142	NM_138569	human	genbank	57_37b	+1	validated	missense	c.202	p.P68A	0.997	NULL	NULL	-	no_errors	
CACNA1E	777	genome.wustl.edu	37	1	181680207	181680207	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	181680207	181680207	T	C	SNP	CACNA1E	NM_000721	human	genbank	57_37b	+1	reviewed	splice_site	c.1171+2	e8+2	1.000	-	-	-	no_errors	
CCDC104	112942	genome.wustl.edu	37	2	55763007	55763007	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	55763007	55763007	T	C	SNP	CCDC104	ENST00000403007	human	ensembl	57_37b	+1	known	silent	c.645	p.F215	0.001	NULL	NULL	-	no_errors	
CCDC45	90799	genome.wustl.edu	37	17	62510391	62510391	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	62510391	62510391	A	T	SNP	CCDC45	NM_138363	human	genbank	57_37b	+1	provisional	missense	c.282	p.K94N	0.895	NULL	NULL	-	no_errors	
CCDC60	160777	genome.wustl.edu	37	12	119943035	119943035	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	119943035	119943035	G	C	SNP	CCDC60	NM_178499	human	genbank	57_37b	+1	validated	missense	c.810	p.Q270H	0.011	NULL	NULL	-	no_errors	
CD36	948	genome.wustl.edu	37	7	80303418	80303418	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	80303418	80303418	T	G	SNP	CD36	NM_000072	human	genbank	57_37b	+1	reviewed	silent	c.1374	p.A458	0.964	NULL	HMMPfam_CD36	-	no_errors	
CDH13	1012	genome.wustl.edu	37	16	83378511	83378511	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	83378511	83378511	G	C	SNP	CDH13	NM_001257	human	genbank	57_37b	+1	reviewed	silent	c.681	p.G227	0.423	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	superfamily_Cadherin,HMMPfam_Cadherin_pro,HMMPfam_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1	-	no_errors	
CELSR1	9620	genome.wustl.edu	37	22	46777911	46777911	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	46777911	46777911	G	A	SNP	CELSR1	NM_014246	human	genbank	57_37b	-1	reviewed	missense	c.6920	p.T2307I	0.001	superfamily_Concanavalin A-like lectins/glucanases	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00179,superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00282,HMMPfam_Laminin_G_2,PatternScan_ASX_HYDROXYL,HMMPfam_Laminin_EGF,HMMSmart_SM00180,PatternScan_EGF_LAM_1,HMMSmart_SM00008,HMMPfam_HRM,HMMPfam_GPS,HMMSmart_SM00303,HMMPfam_7tm_2	-	no_errors	
CES1	1066	genome.wustl.edu	37	16	55857555	55857555	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	55857555	55857555	G	A	SNP	CES1	NM_001025195	human	genbank	57_37b	-1	reviewed	missense	c.446	p.A149V	0.000	HMMPfam_COesterase,superfamily_SSF53474	HMMPfam_COesterase,superfamily_SSF53474,PatternScan_CARBOXYLESTERASE_B_2,PatternScan_CARBOXYLESTERASE_B_1	-	no_errors	
CNTN1	1272	genome.wustl.edu	37	12	41337509	41337509	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	41337509	41337509	G	A	SNP	CNTN1	NM_001843	human	genbank	57_37b	+1	reviewed	missense	c.1490	p.G497E	0.991	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_V-set,PatternScan_N6_MTASE,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors	
CNTN3	5067	genome.wustl.edu	37	3	74313557	74313557	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	74313557	74313557	A	G	SNP	CNTN3	NM_020872	human	genbank	57_37b	-1	validated	missense	c.3082	p.W1028R	0.994	NULL	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_V-set,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors	
CNTNAP1	8506	genome.wustl.edu	37	17	40840974	40840974	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	40840974	40840974	G	A	SNP	CNTNAP1	NM_003632	human	genbank	57_37b	+1	reviewed	missense	c.1537	p.D513N	1.000	superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2	PatternScan_FIBRIN_AG_C_DOMAIN,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_FA58C,superfamily_Gal_bind_like,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2,superfamily_ConA_like_lec_gl,HMMSmart_LamG,HMMPfam_Laminin_G_2,HMMSmart_EGF,HMMPfam_EGF,superfamily_Fibrinogen_a/b/g_C,HMMSmart_FBG,HMMSmart_4.1m	-	no_errors	
COPE	11316	genome.wustl.edu	37	19	19016390	19016390	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	19016390	19016390	G	A	SNP	COPE	NM_007263	human	genbank	57_37b	-1	reviewed	silent	c.492	p.L164	0.725	HMMPfam_Coatomer_E,superfamily_TPR-like	HMMPfam_Coatomer_E,superfamily_TPR-like	-	no_errors	
CP	1356	genome.wustl.edu	37	3	148903026	148903026	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	148903026	148903026	T	G	SNP	CP	NM_000096	human	genbank	57_37b	-1	reviewed	missense	c.2285	p.N762T	0.997	superfamily_Cupredoxins	superfamily_Cupredoxins,HMMPfam_Cu-oxidase_3,HMMPfam_Cu-oxidase,PatternScan_MULTICOPPER_OXIDASE1,HMMPfam_Cu-oxidase_2,PatternScan_MULTICOPPER_OXIDASE2	-	no_errors	
CPEB4	80315	genome.wustl.edu	37	5	173317753	173317753	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	173317753	173317753	A	G	SNP	CPEB4	NM_030627	human	genbank	57_37b	+1	validated	silent	c.1017	p.A339	1.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
CUX2	23316	genome.wustl.edu	37	12	111785467	111785467	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	111785467	111785467	G	C	SNP	CUX2	NM_015267	human	genbank	57_37b	+1	validated	missense	c.3799	p.D1267H	1.000	NULL	HMMPfam_CUT,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
CXorf67	340602	genome.wustl.edu	37	X	51150094	51150094	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	51150094	51150094	G	A	SNP	CXorf67	ENST00000342995	human	ensembl	57_37b	+1	known	missense	c.226	p.A76T	0.001	NULL	NULL	-	no_errors	
DCAF12L2	340578	genome.wustl.edu	37	X	125298656	125298656	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	125298656	125298656	C	G	SNP	DCAF12L2	NM_001013628	human	genbank	57_37b	-1	provisional	missense	c.1252	p.V418L	1.000	NULL	PatternScan_WD_REPEATS_1,superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	-	no_errors	
DCAF13	25879	genome.wustl.edu	37	8	104452383	104452383	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	104452383	104452383	A	G	SNP	DCAF13	NM_015420	human	genbank	57_37b	+1	validated	missense	c.1426	p.R476G	0.961	superfamily_WD40_like,HMMSmart_WD40	superfamily_WD40_like,HMMPfam_WD40,PatternScan_WD_REPEATS_1,HMMSmart_WD40,HMMPfam_Sof1	-	no_errors	
DNAH7	56171	genome.wustl.edu	37	2	196753032	196753032	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	196753032	196753032	A	G	SNP	DNAH7	NM_018897	human	genbank	57_37b	-1	validated	missense	c.5356	p.F1786L	1.000	NULL	HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA_5,PatternScan_EF_HAND_1,HMMPfam_Dynein_heavy,PatternScan_ADH_SHORT	-	no_errors	
DNAH8	1769	genome.wustl.edu	37	6	38825426	38825426	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	38825426	38825426	C	A	SNP	DNAH8	NM_001371	human	genbank	57_37b	+1	validated	missense	c.5215	p.Q1739K	1.000	NULL	HMMPfam_DHC_N1,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,PatternScan_THIOL_PROTEASE_HIS,HMMPfam_AAA_5,HMMPfam_Dynein_heavy	-	no_errors	
DUOX1	53905	genome.wustl.edu	37	15	45437157	45437157	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	45437157	45437157	A	T	SNP	DUOX1	NM_017434	human	genbank	57_37b	+1	reviewed	missense	c.2201	p.K734M	1.000	NULL	superfamily_Heme-dependent peroxidases,HMMPfam_An_peroxidase,superfamily_EF-hand,HMMSmart_SM00054,HMMPfam_efhand,PatternScan_EF_HAND_1,HMMPfam_Ferric_reduct,superfamily_Riboflavin synthase domain-like,HMMPfam_FAD_binding_8,superfamily_Ferredoxin reductase-like C-terminal NADP-linked domain,HMMPfam_NAD_binding_6	-	no_errors	
EDNRB	1910	genome.wustl.edu	37	13	78474078	78474078	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	78474078	78474078	A	G	SNP	EDNRB	NM_000115	human	genbank	57_37b	-1	reviewed	silent	c.1110	p.I370	0.896	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
EEPD1	80820	genome.wustl.edu	37	7	36338772	36338772	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	36338772	36338772	T	G	SNP	EEPD1	NM_030636	human	genbank	57_37b	+1	validated	missense	c.1667	p.V556G	0.999	NULL	HMMPfam_HHH,superfamily_RuvA domain 2-like,HMMSmart_SM00278,HMMPfam_Exo_endo_phos,superfamily_DNase I-like	-	no_errors	
EFR3B	22979	genome.wustl.edu	37	2	25344626	25344626	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	25344626	25344626	T	G	SNP	EFR3B	NM_014971	human	genbank	57_37b	+1	validated	missense	c.448	p.C150G	1.000	superfamily_ARM repeat	superfamily_ARM repeat	-	no_errors	
ELTD1	64123	genome.wustl.edu	37	1	79403558	79403558	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	79403558	79403558	C	G	SNP	ELTD1	NM_022159	human	genbank	57_37b	-1	validated	missense	c.694	p.A232P	0.003	NULL	HMMSmart_EGF,PatternScan_EGF_2,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_EGF_CA,superfamily_SSF57196,PatternScan_ASX_HYDROXYL,PatternScan_EF_HAND_1,HMMPfam_GPS,HMMSmart_GPS,HMMPfam_7tm_2,PatternScan_G_PROTEIN_RECEP_F2_2	-	no_errors	
EMX2	2018	genome.wustl.edu	37	10	119307628	119307628	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	119307628	119307628	A	G	SNP	EMX2	NM_004098	human	genbank	57_37b	+1	reviewed	missense	c.644	p.E215G	1.000	superfamily_Homeodomain_like,HMMSmart_HOX	superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
ENSG00000207858	0	genome.wustl.edu	37	13	90883493	90883493	+	RNA	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	90883493	90883493	C	G	SNP	ENSG00000207858	ENST00000385123	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.040	-	-	-	no_errors	
ENSG00000230510	0	genome.wustl.edu	37	19	47030324	47030324	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	47030324	47030324	G	T	SNP	ENSG00000230510	ENST00000414155	human	ensembl	57_37b	-1	known	silent	c.84	p.V28	0.991	NULL	HMMPfam_PPP5	-	no_errors	
ENSG00000240720	0	genome.wustl.edu	37	7	91775484	91775484	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	91775484	91775484	A	T	SNP	ENSG00000240720	ENST00000430130	human	ensembl	57_37b	-1	known	missense	c.2309	p.V770D	0.999	NULL	PatternScan_CARBAMOYLTRANSFERASE,superfamily_L domain-like,HMMSmart_SM00365,HMMSmart_SM00364,HMMSmart_SM00369,HMMPfam_LRR_1,PatternScan_PEROXIDASE_1	-	no_errors	
ENSG00000245250	0	genome.wustl.edu	37	1	202935152	202935152	+	RNA	SNP	T	T	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	202935152	202935152	T	C	SNP	ENSG00000245250	ENST00000501099	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	
ENSG00000245250	0	genome.wustl.edu	37	1	202936343	202936348	+	RNA	DEL	CCTTTT	CCTTTT	-	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	CCTTTT	CCTTTT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	202936343	202936348	CCTTTT	-	DEL	ENSG00000245250	ENST00000501099	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000:0.000:0.000:0.000:0.017:0.016	-	-	(deletion:rna[202934889,202936383])	no_errors	
ENSG00000245963	0	genome.wustl.edu	37	5	10707742	10707742	+	RNA	SNP	T	C	C	rs2930054	byCluster;by1000genomes	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	10707742	10707742	T	C	SNP	ENSG00000245963	ENST00000500915	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.078	-	-	-		
ENSG00000246767	0	genome.wustl.edu	37	8	101276095	101276095	+	RNA	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	101276095	101276095	C	T	SNP	ENSG00000246767	ENST00000500027	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.162	-	-	-	no_errors	
ENSG00000248035	0	genome.wustl.edu	37	10	97423744	97423744	+	RNA	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	97423744	97423744	T	G	SNP	ENSG00000248035	ENST00000499108	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	
F5	2153	genome.wustl.edu	37	1	169510453	169510453	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	169510453	169510453	G	T	SNP	F5	NM_000130	human	genbank	57_37b	-1	reviewed	missense	c.3875	p.T1292K	0.000	HMMPfam_LSPR	superfamily_Cupredoxins,HMMPfam_Cu-oxidase_3,PatternScan_MULTICOPPER_OXIDASE1,HMMPfam_LSPR,superfamily_Galactose-binding domain-like,HMMSmart_SM00231,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2	-	no_errors	
FAM129C	199786	genome.wustl.edu	37	19	17653023	17653023	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	17653023	17653023	C	T	SNP	FAM129C	NM_173544	human	genbank	57_37b	+1	validated	missense	c.1342	p.R448C	0.001	NULL	superfamily_PH domain-like,HMMSmart_SM00233	-	no_errors	
FAM54B	56181	genome.wustl.edu	37	1	26153135	26153135	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	26153135	26153135	G	A	SNP	FAM54B	NM_001099625	human	genbank	57_37b	+1	validated	nonsense	c.269	p.W90*	1.000	HMMPfam_DUF729	HMMPfam_DUF729	-	no_errors	
FANCI	55215	genome.wustl.edu	37	15	89807217	89807217	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	89807217	89807217	T	C	SNP	FANCI	NM_001113378	human	genbank	57_37b	+1	reviewed	missense	c.629	p.I210T	1.000	NULL	NULL	-	no_errors	
FAT3	120114	genome.wustl.edu	37	11	92534181	92534181	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	92534181	92534181	C	G	SNP	FAT3	NM_001008781	human	genbank	57_37b	+1	validated	missense	c.8002	p.Q2668E	1.000	superfamily_Concanavalin A-like lectins/glucanases,superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,superfamily_Concanavalin A-like lectins/glucanases,superfamily_EGF/Laminin,HMMSmart_SM00181,HMMSmart_SM00282,HMMPfam_Laminin_G_2,HMMSmart_SM00179,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors	
FCHO1	23149	genome.wustl.edu	37	19	17889452	17889452	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	17889452	17889452	C	T	SNP	FCHO1	NM_015122	human	genbank	57_37b	+1	validated	silent	c.1386	p.S462	0.958	NULL	HMMPfam_FCH,HMMSmart_SM00055,HMMPfam_SAFF	-	no_errors	
FETUB	26998	genome.wustl.edu	37	3	186362642	186362642	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	186362642	186362642	C	G	SNP	FETUB	NM_014375	human	genbank	57_37b	+1	reviewed	missense	c.527	p.A176G	0.961	HMMSmart_SM00043,superfamily_Cystatin/monellin,HMMPfam_Cystatin	HMMSmart_SM00043,superfamily_Cystatin/monellin,PatternScan_FETUIN_1,HMMPfam_Cystatin,PatternScan_FETUIN_2	-	no_errors	
FGD3	89846	genome.wustl.edu	37	9	95795090	95795090	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	95795090	95795090	A	T	SNP	FGD3	NM_001083536	human	genbank	57_37b	+1	validated	missense	c.1720	p.S574C	0.999	superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE	superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_FYVE/PHD zinc finger,HMMSmart_SM00064,HMMPfam_FYVE	-	no_errors	
FIGN	55137	genome.wustl.edu	37	2	164466580	164466580	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	164466580	164466580	C	G	SNP	FIGN	NM_018086	human	genbank	57_37b	-1	validated	missense	c.1762	p.D588H	1.000	superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA	superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA,PatternScan_AAA	-	no_errors	
FKBP6	8468	genome.wustl.edu	37	7	72756874	72756874	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	72756874	72756874	G	T	SNP	FKBP6	NM_003602	human	genbank	57_37b	+1	reviewed	missense	c.961	p.G321C	0.000	superfamily_SSF48452	superfamily_SSF54534,HMMPfam_FKBP_C,superfamily_SSF48452	-	no_errors	
FLRT2	23768	genome.wustl.edu	37	14	86088314	86088314	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	86088314	86088314	C	T	SNP	FLRT2	NM_013231	human	genbank	57_37b	+1	reviewed	silent	c.456	p.D152	0.692	superfamily_SSF52058,HMMPfam_LRR_1	superfamily_SSF52058,HMMPfam_LRRNT,HMMSmart_LRRNT,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_LRRCT,HMMPfam_LRRCT,HMMPfam_fn3,HMMSmart_FN3,superfamily_FN_III-like	-	no_errors	
FNDC7	163479	genome.wustl.edu	37	1	109268596	109268596	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	109268596	109268596	C	T	SNP	FNDC7	NM_001144937	human	genbank	57_37b	+1	provisional	missense	c.1081	p.P361S	1.000	superfamily_Fibronectin type III	HMMPfam_fn3,superfamily_Fibronectin type III,HMMSmart_SM00060	-	no_errors	
FPR2	2358	genome.wustl.edu	37	19	52272299	52272299	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52272299	52272299	C	A	SNP	FPR2	NM_001005738	human	genbank	57_37b	+1	validated	missense	c.388	p.P130T	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
FXR2	9513	genome.wustl.edu	37	17	7497244	7497244	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7497244	7497244	A	G	SNP	FXR2	NM_004860	human	genbank	57_37b	-1	reviewed	missense	c.1099	p.Y367H	1.000	superfamily_Eukaryotic type KH-domain (KH-domain type I)	HMMPfam_Agenet,superfamily_Eukaryotic type KH-domain (KH-domain type I),HMMSmart_SM00322,HMMPfam_KH_1	-	no_errors	
FZD6	8323	genome.wustl.edu	37	8	104340619	104340619	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	104340619	104340619	T	G	SNP	FZD6	NM_003506	human	genbank	57_37b	+1	reviewed	missense	c.1516	p.F506V	1.000	HMMPfam_Frizzled	HMMPfam_Fz,superfamily_Frizzled_Cys-rich,HMMSmart_FRI,HMMPfam_Frizzled	-	no_errors	
GALNT13	114805	genome.wustl.edu	37	2	155115571	155115571	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	155115571	155115571	A	T	SNP	GALNT13	NM_052917	human	genbank	57_37b	+1	validated	nonsense	c.895	p.R299*	1.000	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2	superfamily_Nucleotide-diphospho-sugar transferases,HMMPfam_Glycos_transf_2,superfamily_Ricin B-like lectins,HMMSmart_SM00458,HMMPfam_Ricin_B_lectin	-	no_errors	
GRID1	2894	genome.wustl.edu	37	10	87966206	87966206	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	87966206	87966206	T	G	SNP	GRID1	NM_017551	human	genbank	57_37b	-1	reviewed	silent	c.435	p.P145	0.000	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor	superfamily_Periplasmic binding protein-like I,HMMPfam_ANF_receptor,HMMSmart_SM00079,superfamily_Periplasmic binding protein-like II,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,PatternScan_ALDEHYDE_DEHYDR_GLU	-	no_errors	
GSS	2937	genome.wustl.edu	37	20	33530406	33530406	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	33530406	33530406	A	C	SNP	GSS	NM_000178	human	genbank	57_37b	-1	reviewed	missense	c.376	p.S126A	1.000	superfamily_SSF56059,HMMPfam_GSH_synth_ATP	superfamily_SSF56059,HMMPfam_GSH_synth_ATP,HMMPfam_GSH_synthase,superfamily_PreATP-grasp-like	-	no_errors	
HERC4	26091	genome.wustl.edu	37	10	69793826	69793829	+	Frame_Shift_Del	DEL	TGCA	TGCA	-	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	TGCA	TGCA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	69793826	69793829	TGCA	-	DEL	HERC4	NM_022079	human	genbank	57_37b	-1	validated	frame_shift_del	c.581_578	p.M193fs	1.000:1.000:1.000:1.000	superfamily_RCC1/BLIP-II,HMMPfam_RCC1	superfamily_RCC1/BLIP-II,PatternScan_RCC1_2,HMMPfam_RCC1,superfamily_Hect E3 ligase catalytic domain,HMMSmart_SM00119,HMMPfam_HECT	(deletion:cds_exon[69793722,69793943])	no_errors	
IL17A	3605	genome.wustl.edu	37	6	52053964	52053964	+	Silent	SNP	C	C	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	52053964	52053964	C	A	SNP	IL17A	NM_002190	human	genbank	57_37b	+1	reviewed	silent	c.342	p.P114	1.000	HMMPfam_IL17,superfamily_Cystine-knot cytokines	HMMPfam_IL17,superfamily_Cystine-knot cytokines	-	no_errors	
IQCF2	389123	genome.wustl.edu	37	3	51897216	51897216	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	51897216	51897216	T	C	SNP	IQCF2	NM_203424	human	genbank	57_37b	+1	validated	silent	c.325	p.L109	0.016	superfamily_SSF52540,HMMSmart_IQ,HMMPfam_IQ	superfamily_SSF52540,HMMSmart_IQ,HMMPfam_IQ	-	no_errors	
ITGAX	3687	genome.wustl.edu	37	16	31371718	31371718	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	31371718	31371718	C	T	SNP	ITGAX	NM_000887	human	genbank	57_37b	+1	reviewed	silent	c.795	p.D265	0.011	superfamily_SSF69318,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA	superfamily_SSF69318,HMMSmart_Int_alpha,superfamily_SSF53300,HMMSmart_VWA,HMMPfam_VWA,HMMPfam_FG-GAP,HMMPfam_Integrin_alpha2,superfamily_SSF69179,PatternScan_INTEGRIN_ALPHA,HMMPfam_Integrin_alpha	-	no_errors	
JARID2	3720	genome.wustl.edu	37	6	15496556	15496556	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	15496556	15496556	C	G	SNP	JARID2	NM_004973	human	genbank	57_37b	+1	reviewed	missense	c.1100	p.P367R	1.000	NULL	HMMSmart_SM00545,HMMPfam_JmjN,superfamily_ARID-like,HMMPfam_ARID,HMMSmart_SM00501,HMMSmart_SM00558,HMMPfam_JmjC,HMMPfam_zf-C5HC2	-	no_errors	
KCNA2	3737	genome.wustl.edu	37	1	111146353	111146358	+	In_Frame_Del	DEL	GCCTCT	GCCTCT	-	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	GCCTCT	GCCTCT					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	111146353	111146358	GCCTCT	-	DEL	KCNA2	NM_004974	human	genbank	57_37b	-1	reviewed	in_frame_del	c.1052_1047	p.EA350in_frame_del	1.000:1.000:1.000:1.000:1.000:0.998	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_BTB/POZ_fold,HMMSmart_BTB,HMMPfam_K_tetra,superfamily_SSF81324,HMMPfam_Ion_trans	(deletion:cds_exon[111145905,111147404])	no_errors	
KIAA0226	9711	genome.wustl.edu	37	3	197421305	197421305	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	197421305	197421305	C	T	SNP	KIAA0226	NM_001145642	human	genbank	57_37b	-1	validated	missense	c.1490	p.R497Q	1.000	NULL	HMMSmart_SM00593	-	no_errors	
KIAA0319L	79932	genome.wustl.edu	37	1	35908580	35908580	+	Silent	SNP	T	T	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	35908580	35908580	T	C	SNP	KIAA0319L	NM_024874	human	genbank	57_37b	-1	reviewed	silent	c.2706	p.K902	0.928	NULL	HMMSmart_SM00089,superfamily_PKD domain	-	no_errors	
KIAA0368	23392	genome.wustl.edu	37	9	114145598	114145598	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	114145598	114145598	C	A	SNP	KIAA0368	NM_001080398	human	genbank	57_37b	-1	provisional	missense	c.4230	p.M1410I	1.000	superfamily_ARM repeat	superfamily_ARM repeat,HMMPfam_HEAT	-	no_errors	
KIF4A	24137	genome.wustl.edu	37	X	69594088	69594088	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	69594088	69594088	G	A	SNP	KIF4A	NM_012310	human	genbank	57_37b	+1	validated	missense	c.1762	p.D588N	1.000	NULL	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors	
KLRC1	3821	genome.wustl.edu	37	12	10600152	10600152	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	10600152	10600152	T	-	DEL	KLRC1	NM_002259	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.569	p.N190fs	0.196	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	superfamily_C-type lectin-like,HMMSmart_SM00034,HMMPfam_Lectin_C	(deletion:cds_exon[10600131,10600231])	no_errors	
KRT79	338785	genome.wustl.edu	37	12	53218090	53218090	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	53218090	53218090	G	C	SNP	KRT79	NM_175834	human	genbank	57_37b	-1	reviewed	missense	c.912	p.D304E	1.000	HMMPfam_Filament,superfamily_Prefoldin	HMMPfam_Filament,superfamily_Prefoldin,PatternScan_IF	-	no_errors	
LOC100292661	0	genome.wustl.edu	37	7	2188775	2188775	+	Missense_Mutation	SNP	G	G	A	rs10252865	byCluster;by1000genomes	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	2188775	2188775	G	A	SNP	LOC100292661	XM_002346059	human	genbank	57_37b	+1	model	missense	c.437	p.R146Q	0.000	NULL	NULL	-		
LOC643677	643677	genome.wustl.edu	37	13	103386074	103386074	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	103386074	103386074	T	G	SNP	LOC643677	XM_002344085	human	genbank	57_37b	-1	model	missense	c.16517	p.D5506A	0.002	NULL	NULL	-	no_errors	
LRBA	987	genome.wustl.edu	37	4	151829594	151829594	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	151829594	151829594	G	C	SNP	LRBA	NM_006726	human	genbank	57_37b	-1	validated	missense	c.1385	p.S462C	1.000	superfamily_ARM repeat	superfamily_ARM repeat,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_DUF1088,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors	
LRFN1	57622	genome.wustl.edu	37	19	39798427	39798427	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	39798427	39798427	C	G	SNP	LRFN1	NM_020862	human	genbank	57_37b	-1	validated	missense	c.2162	p.R721P	1.000	NULL	superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP,HMMSmart_LRRCT,superfamily_SSF48726,HMMPfam_I-set,HMMSmart_IGc2,HMMSmart_FN3,HMMPfam_fn3,superfamily_FN_III-like	-	no_errors	
LRPPRC	10128	genome.wustl.edu	37	2	44190742	44190742	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	44190742	44190742	T	-	DEL	LRPPRC	NM_133259	human	genbank	57_37b	-1	reviewed	frame_shift_del	c.1473	p.R492fs	0.002	NULL	superfamily_SSF48452,HMMPfam_PPR	(deletion:cds_exon[44190727,44190845])	no_errors	
LRRC33	375387	genome.wustl.edu	37	3	196386694	196386694	+	Silent	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	196386694	196386694	G	T	SNP	LRRC33	NM_198565	human	genbank	57_37b	+1	provisional	silent	c.180	p.R60	0.004	superfamily_SSF52058	superfamily_SSF52058,HMMPfam_LRR_1,HMMSmart_LRR_TYP	-	no_errors	
LRRC46	90506	genome.wustl.edu	37	17	45909569	45909569	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	45909569	45909569	G	A	SNP	LRRC46	NM_033413	human	genbank	57_37b	+1	provisional	silent	c.114	p.K38	1.000	NULL	superfamily_Outer arm dynein light chain 1,HMMSmart_SM00365,HMMSmart_SM00369,HMMPfam_LRR_1	-	no_errors	
LTBP1	4052	genome.wustl.edu	37	2	33482526	33482526	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	33482526	33482526	G	A	SNP	LTBP1	NM_206943	human	genbank	57_37b	+1	reviewed	silent	c.2343	p.V781	1.000	NULL	superfamily_EGF/Laminin,HMMSmart_SM00181,HMMPfam_EGF,PatternScan_EGF_1,superfamily_TB module/8-cys domain,HMMPfam_TB,PatternScan_EGF_CA,HMMPfam_EGF_CA,HMMSmart_SM00179,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2	-	no_errors	
MAP3K7	6885	genome.wustl.edu	37	6	91257871	91257871	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	91257871	91257871	T	G	SNP	MAP3K7	NM_145331	human	genbank	57_37b	-1	reviewed	silent	c.975	p.T325	1.000	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
MAP4K1	11184	genome.wustl.edu	37	19	39098533	39098533	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	39098533	39098533	C	T	SNP	MAP4K1	NM_007181	human	genbank	57_37b	-1	validated	silent	c.1128	p.S376	0.051	NULL	PatternScan_PROTEIN_KINASE_ST,superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,HMMSmart_CNH,HMMPfam_CNH	-	no_errors	
MAPK8IP2	23542	genome.wustl.edu	37	22	51041670	51041670	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	51041670	51041670	C	T	SNP	MAPK8IP2	ENST00000329492	human	ensembl	57_37b	+1	known	missense	c.190	p.R64C	1.000	NULL	superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_PH domain-like,HMMSmart_SM00462,HMMPfam_PID	-	no_errors	
MCM2	4171	genome.wustl.edu	37	3	127325147	127325147	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	127325147	127325147	A	C	SNP	MCM2	NM_004526	human	genbank	57_37b	+1	reviewed	missense	c.860	p.H287P	1.000	superfamily_Nucleic_acid_OB	superfamily_Nucleic_acid_OB,HMMSmart_MCM,HMMPfam_MCM,superfamily_SSF52540,PatternScan_MCM_1	-	no_errors	
MIR647	0	genome.wustl.edu	37	20	62574006	62574006	+	RNA	SNP	A	G	G	rs73147065	byCluster;by1000genomes	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	62574006	62574006	A	G	SNP	MIR647	ENST00000384823	human	ensembl	57_37b	-1	known	rna	NULL	NULL	0.000	-	-	-		
MUC12	10071	genome.wustl.edu	37	7	100646595	100646595	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	100646595	100646595	C	T	SNP	MUC12	ENST00000379442	human	ensembl	57_37b	+1	known	missense	c.13180	p.P4394S	0.005	NULL	PatternScan_EGF_1,PatternScan_EGF_2,HMMPfam_SEA,HMMSmart_SEA	-	no_errors	
MUC4	4585	genome.wustl.edu	37	3	195511438	195511438	+	Missense_Mutation	SNP	G	G	T	rs71635083	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	195511438	195511438	G	T	SNP	MUC4	NM_018406	human	genbank	57_37b	-1	reviewed	missense	c.7013	p.P2338H	0.157	NULL	HMMSmart_SM00539,HMMPfam_NIDO,PatternScan_SUGAR_TRANSPORT_2,HMMSmart_SM00723,HMMPfam_AMOP,HMMSmart_SM00216,HMMPfam_VWD,PatternScan_EGF_1,HMMSmart_SM00181,superfamily_EGF/Laminin	-		
MUM1L1	139221	genome.wustl.edu	37	X	105450903	105450903	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	105450903	105450903	A	G	SNP	MUM1L1	ENST00000337685	human	ensembl	57_37b	+1	known	missense	c.1478	p.Y493C	0.970	superfamily_SSF63748	superfamily_SSF63748	-	no_errors	
MYH6	4624	genome.wustl.edu	37	14	23862941	23862941	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	23862941	23862941	C	T	SNP	MYH6	NM_002471	human	genbank	57_37b	-1	validated	silent	c.2862	p.K954	0.988	NULL	HMMPfam_Myosin_N,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00242,HMMPfam_Myosin_head,superfamily_Prefoldin,HMMPfam_Myosin_tail_1	-	no_errors	
NALCN	259232	genome.wustl.edu	37	13	101733990	101733990	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	101733990	101733990	A	C	SNP	NALCN	NM_052867	human	genbank	57_37b	-1	validated	missense	c.3773	p.M1258R	1.000	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	superfamily_Voltage-gated potassium channels,HMMPfam_Ion_trans	-	no_errors	
NCAM1	4684	genome.wustl.edu	37	11	113103076	113103076	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	113103076	113103076	G	C	SNP	NCAM1	ENST00000401611	human	ensembl	57_37b	+1	known	missense	c.1041	p.E347D	1.000	superfamily_SSF48726,HMMSmart_IGc2,HMMPfam_ig	superfamily_SSF48726,HMMSmart_IGc2,HMMPfam_ig,HMMPfam_I-set,superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3	-	no_errors	
NCAPD3	23310	genome.wustl.edu	37	11	134073802	134073802	+	Splice_Site	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	134073802	134073802	C	G	SNP	NCAPD3	NM_015261	human	genbank	57_37b	-1	validated	splice_site	c.1216-1	e11-1	1.000	-	-	-	no_errors	
NCOR1	9611	genome.wustl.edu	37	17	15938204	15938204	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	15938204	15938204	G	A	SNP	NCOR1	NM_006311	human	genbank	57_37b	-1	reviewed	missense	c.7010	p.S2337F	1.000	NULL	superfamily_Homeodomain-like,HMMSmart_SM00717,HMMPfam_Myb_DNA-binding	-	no_errors	
NDUFB3	4709	genome.wustl.edu	37	2	201950321	201950321	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	201950321	201950321	G	C	SNP	NDUFB3	NM_002491	human	genbank	57_37b	+1	validated	missense	c.280	p.D94H	0.605	HMMPfam_NDUF_B12	HMMPfam_NDUF_B12	-	no_errors	
NELL1	4745	genome.wustl.edu	37	11	20949974	20949974	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	20949974	20949974	C	T	SNP	NELL1	NM_006157	human	genbank	57_37b	+1	reviewed	missense	c.946	p.P316S	0.285	HMMPfam_VWC,HMMSmart_SM00214,HMMSmart_SM00215,PatternScan_VWFC_1	HMMSmart_SM00210,HMMSmart_SM00282,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_VWC,HMMSmart_SM00214,HMMSmart_SM00215,PatternScan_VWFC_1,HMMSmart_SM00179,HMMSmart_SM00181,superfamily_EGF/Laminin,PatternScan_EGF_CA,HMMPfam_EGF_CA,PatternScan_ASX_HYDROXYL,PatternScan_EGF_2,HMMPfam_EGF_2,PatternScan_EGF_1	-	no_errors	
NPFFR2	10886	genome.wustl.edu	37	4	73013148	73013148	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	73013148	73013148	G	T	SNP	NPFFR2	NM_004885	human	genbank	57_37b	+1	reviewed	missense	c.1188	p.M396I	1.000	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-	no_errors	
NSUN5C	260294	genome.wustl.edu	37	7	72419561	72419562	+	Frame_Shift_Ins	INS	-	-	CTGGAACC	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	72419561	72419562	-	CTGGAACC	INS	NSUN5C	ENST00000330999	human	ensembl	57_37b	-1	known	frame_shift_ins	c.463_462	p.Q154fs	1.000:1.000	HMMPfam_Nol1_Nop2_Fmu,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	HMMPfam_Nol1_Nop2_Fmu,superfamily_S-adenosyl-L-methionine-dependent methyltransferases	-	no_errors	
NUP205	23165	genome.wustl.edu	37	7	135300790	135300790	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	135300790	135300790	A	G	SNP	NUP205	NM_015135	human	genbank	57_37b	+1	validated	missense	c.3437	p.D1146G	1.000	NULL	NULL	-	no_errors	
OR10H4	126541	genome.wustl.edu	37	19	16060405	16060405	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	16060405	16060405	T	G	SNP	OR10H4	NM_001004465	human	genbank	57_37b	+1	validated	silent	c.588	p.S196	0.000	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors	
OR52M1	119772	genome.wustl.edu	37	11	4566606	4566606	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	4566606	4566606	C	A	SNP	OR52M1	NM_001004137	human	genbank	57_37b	+1	validated	nonsense	c.186	p.Y62*	0.685	superfamily_SSF81321,HMMPfam_7tm_1	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors	
PAX5	5079	genome.wustl.edu	37	9	37015189	37015189	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	37015189	37015189	T	C	SNP	PAX5	NM_016734	human	genbank	57_37b	-1	reviewed	missense	c.215	p.Y72C	1.000	HMMPfam_PAX,HMMSmart_SM00351,superfamily_Homeodomain-like	HMMPfam_PAX,HMMSmart_SM00351,superfamily_Homeodomain-like,PatternScan_PAIRED_1	-	no_errors	
PCDHGA7	56108	genome.wustl.edu	37	5	140763532	140763532	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140763532	140763532	A	G	SNP	PCDHGA7	NM_018920	human	genbank	57_37b	+1	reviewed	missense	c.1066	p.I356V	0.000	superfamily_Cadherin-like,HMMPfam_Cadherin	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHGB5	56101	genome.wustl.edu	37	5	140779116	140779116	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140779116	140779116	C	A	SNP	PCDHGB5	NM_018925	human	genbank	57_37b	+1	reviewed	missense	c.1422	p.D474E	0.998	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCDHGB7	56099	genome.wustl.edu	37	5	140797618	140797618	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140797618	140797618	C	T	SNP	PCDHGB7	NM_018927	human	genbank	57_37b	+1	reviewed	silent	c.192	p.R64	0.871	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112	superfamily_Cadherin-like,HMMPfam_Cadherin_2,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PDCL2	132954	genome.wustl.edu	37	4	56435917	56435917	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	56435917	56435917	A	C	SNP	PDCL2	NM_152401	human	genbank	57_37b	-1	reviewed	missense	c.330	p.D110E	1.000	HMMPfam_Phosducin,superfamily_Thiordxn-like_fd	HMMPfam_Phosducin,superfamily_Thiordxn-like_fd	-	no_errors	
PDLIM5	10611	genome.wustl.edu	37	4	95539203	95539203	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	95539203	95539203	A	T	SNP	PDLIM5	NM_006457	human	genbank	57_37b	+1	reviewed	silent	c.969	p.T323	0.000	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,superfamily_Glucocorticoid receptor-like (DNA-binding domain),HMMSmart_SM00132,HMMPfam_LIM,PatternScan_LIM_DOMAIN_1	-	no_errors	
PHKB	5257	genome.wustl.edu	37	16	47683069	47683069	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	47683069	47683069	A	G	SNP	PHKB	NM_000293	human	genbank	57_37b	+1	reviewed	missense	c.1751	p.D584G	1.000	HMMPfam_PHK_AB	HMMPfam_PHK_AB,superfamily_Six-hairpin glycosidases	-	no_errors	
PHLDA1	22822	genome.wustl.edu	37	12	76425062	76425062	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	76425062	76425062	C	A	SNP	PHLDA1	NM_007350	human	genbank	57_37b	-1	reviewed	missense	c.460	p.G154C	1.000	superfamily_SSF50729,HMMSmart_PH	superfamily_SSF50729,HMMSmart_PH	-	no_errors	
PIK3CA	5290	genome.wustl.edu	37	3	178937452	178937452	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	178937452	178937452	T	A	SNP	PIK3CA	NM_006218	human	genbank	57_37b	+1	reviewed	missense	c.1840	p.F614I	1.000	superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka	HMMPfam_PI3K_p85B,HMMSmart_PI3K_p85B,superfamily_SSF54236,HMMPfam_PI3K_rbd,HMMSmart_PI3K_rbd,HMMSmart_PI3K_C2,superfamily_C2_CaLB,HMMSmart_C2,HMMPfam_PI3K_C2,superfamily_ARM-type_fold,HMMSmart_PI3Ka,HMMPfam_PI3Ka,superfamily_Kinase_like,HMMPfam_PI3_PI4_kinase,HMMSmart_PI3Kc,PatternScan_PI3_4_KINASE_1,PatternScan_PI3_4_KINASE_2	-	no_errors	
PJA2	9867	genome.wustl.edu	37	5	108704338	108704338	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	108704338	108704338	C	G	SNP	PJA2	NM_014819	human	genbank	57_37b	-1	validated	missense	c.1393	p.D465H	1.000	NULL	PatternScan_N6_MTASE,superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4	-	no_errors	
POU2F3	25833	genome.wustl.edu	37	11	120173009	120173009	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	120173009	120173009	C	A	SNP	POU2F3	NM_014352	human	genbank	57_37b	+1	validated	missense	c.376	p.L126I	1.000	NULL	HMMPfam_Pou,HMMSmart_SM00352,superfamily_lambda repressor-like DNA-binding domains,PatternScan_POU_1,PatternScan_POU_2,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
PRAME	23532	genome.wustl.edu	37	22	22890750	22890750	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	22890750	22890750	C	G	SNP	PRAME	NM_006115	human	genbank	57_37b	-1	reviewed	missense	c.1269	p.L423F	0.024	superfamily_RNI-like	superfamily_RNI-like	-	no_errors	
PRAMEF10	343071	genome.wustl.edu	37	1	12954759	12954759	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	12954759	12954759	C	G	SNP	PRAMEF10	NM_001039361	human	genbank	57_37b	-1	validated	missense	c.524	p.R175T	0.000	superfamily_SSF52047	superfamily_SSF52047	-	no_errors	
PREX1	57580	genome.wustl.edu	37	20	47305213	47305213	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	47305213	47305213	G	T	SNP	PREX1	NM_020820	human	genbank	57_37b	-1	reviewed	missense	c.1316	p.P439H	1.000	"superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00049,HMMPfam_DEP"	"superfamily_DBL homology domain (DH-domain),HMMPfam_RhoGEF,HMMSmart_SM00325,PatternScan_DH_1,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,superfamily_""Winged helix"" DNA-binding domain,HMMSmart_SM00049,HMMPfam_DEP,superfamily_PDZ domain-like,HMMSmart_SM00228"	-	no_errors	
PRPF38B	55119	genome.wustl.edu	37	1	109238761	109238761	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	109238761	109238761	C	G	SNP	PRPF38B	NM_018061	human	genbank	57_37b	+1	validated	missense	c.442	p.L148V	1.000	HMMPfam_PRP38	HMMPfam_PRP38	-	no_errors	
PYGL	5836	genome.wustl.edu	37	14	51398410	51398410	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	51398410	51398410	T	G	SNP	PYGL	NM_002863	human	genbank	57_37b	-1	reviewed	missense	c.509	p.K170T	1.000	superfamily_SSF53756,HMMPfam_Phosphorylase	superfamily_SSF53756,HMMPfam_Phosphorylase,PatternScan_PHOSPHORYLASE	-	no_errors	
RAD51AP1	10635	genome.wustl.edu	37	12	4653024	4653024	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	4653024	4653024	C	G	SNP	RAD51AP1	NM_001130862	human	genbank	57_37b	+1	validated	missense	c.163	p.L55V	0.000	NULL	NULL	-	no_errors	
RALYL	138046	genome.wustl.edu	37	8	85833143	85833143	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	85833143	85833143	G	T	SNP	RALYL	NM_001100391	human	genbank	57_37b	+1	validated	missense	c.912	p.K304N	1.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
RBM47	54502	genome.wustl.edu	37	4	40427971	40427971	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	40427971	40427971	G	T	SNP	RBM47	NM_001098634	human	genbank	57_37b	-1	validated	missense	c.1732	p.P578T	1.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
RDH5	5959	genome.wustl.edu	37	12	56118203	56118203	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	56118203	56118203	C	T	SNP	RDH5	NM_002905	human	genbank	57_37b	+1	reviewed	silent	c.831	p.P277	1.000	superfamily_NAD(P)-bd	PatternScan_ADH_SHORT,superfamily_NAD(P)-bd,HMMPfam_adh_short	-	no_errors	
RFC4	5984	genome.wustl.edu	37	3	186508118	186508118	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	186508118	186508118	G	C	SNP	RFC4	NM_002916	human	genbank	57_37b	-1	reviewed	silent	c.879	p.V293	0.837	HMMPfam_Rep_fac_C,superfamily_Pol_clamp_load_C	superfamily_SSF52540,HMMSmart_AAA,HMMPfam_AAA,HMMPfam_Rep_fac_C,superfamily_Pol_clamp_load_C	-	no_errors	
RGL3	57139	genome.wustl.edu	37	19	11507984	11507984	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	11507984	11507984	C	T	SNP	RGL3	NM_001035223	human	genbank	57_37b	-1	validated	silent	c.1950	p.K650	1.000	superfamily_Ubiquitin-like,HMMSmart_SM00314,HMMPfam_RA	superfamily_Ras GEF,HMMSmart_SM00229,HMMPfam_RasGEF_N,HMMSmart_SM00147,HMMPfam_RasGEF,PatternScan_RASGEF,superfamily_Ubiquitin-like,HMMSmart_SM00314,HMMPfam_RA	-	no_errors	
RIMS2	9699	genome.wustl.edu	37	8	104973347	104973347	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	104973347	104973347	T	C	SNP	RIMS2	NM_001100117	human	genbank	57_37b	+1	validated	missense	c.2756	p.I919T	1.000	NULL	HMMPfam_RPH3A_effector,superfamily_FYVE/PHD zinc finger,superfamily_PDZ domain-like,HMMSmart_SM00228,superfamily_C2 domain (Calcium/lipid-binding domain CaLB),HMMSmart_SM00239,HMMPfam_C2	-	no_errors	
RNF220	55182	genome.wustl.edu	37	1	44877905	44877905	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	44877905	44877905	C	T	SNP	RNF220	NM_018150	human	genbank	57_37b	+1	validated	nonsense	c.136	p.R46*	1.000	NULL	superfamily_RING/U-box	-	no_errors	
ROPN1	54763	genome.wustl.edu	37	3	123688911	123688911	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	123688911	123688911	G	A	SNP	ROPN1	NM_017578	human	genbank	57_37b	-1	provisional	silent	c.550	p.L184	1.000	NULL	superfamily_Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit,HMMPfam_RIIa	-	no_errors	
RSBN1	54665	genome.wustl.edu	37	1	114340575	114340575	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	114340575	114340575	G	C	SNP	RSBN1	NM_018364	human	genbank	57_37b	-1	validated	missense	c.787	p.R263G	1.000	NULL	NULL	-	no_errors	
SAGE1	55511	genome.wustl.edu	37	X	134991072	134991072	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	134991072	134991072	A	G	SNP	SAGE1	NM_018666	human	genbank	57_37b	+1	reviewed	silent	c.1491	p.K497	0.000	NULL	NULL	-	no_errors	
SAP130	79595	genome.wustl.edu	37	2	128750777	128750777	+	Silent	SNP	A	A	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	128750777	128750777	A	T	SNP	SAP130	NM_024545	human	genbank	57_37b	-1	validated	silent	c.1539	p.T513	0.995	NULL	NULL	-	no_errors	
SGCA	6442	genome.wustl.edu	37	17	48247563	48247563	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	48247563	48247563	G	C	SNP	SGCA	NM_000023	human	genbank	57_37b	+1	reviewed	silent	c.807	p.L269	1.000	HMMPfam_Sarcoglycan_2	HMMPfam_Sarcoglycan_2,HMMSmart_SM00736,superfamily_Cadherin-like	-	no_errors	
SGMS1	259230	genome.wustl.edu	37	10	52103376	52103376	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	52103376	52103376	G	A	SNP	SGMS1	NM_147156	human	genbank	57_37b	-1	reviewed	missense	c.499	p.P167S	1.000	NULL	superfamily_SAM/Pointed domain,HMMPfam_SAM_1	-	no_errors	
SI	6476	genome.wustl.edu	37	3	164773011	164773011	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	164773011	164773011	G	C	SNP	SI	NM_001041	human	genbank	57_37b	-1	validated	missense	c.1483	p.Q495E	0.300	HMMPfam_Glyco_hydro_31,superfamily_(Trans)glycosidases	HMMSmart_SM00018,superfamily_Trefoil,HMMPfam_Trefoil,PatternScan_P_TREFOIL,HMMPfam_Glyco_hydro_31,superfamily_(Trans)glycosidases,PatternScan_GLYCOSYL_HYDROL_F31_1,PatternScan_GLYCOSYL_HYDROL_F31_2	-	no_errors	
SIGLEC9	27180	genome.wustl.edu	37	19	51628959	51628959	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	51628959	51628959	C	T	SNP	SIGLEC9	NM_014441	human	genbank	57_37b	+1	provisional	missense	c.527	p.P176L	0.000	superfamily_SSF48726,HMMPfam_ig	superfamily_SSF48726,HMMPfam_V-set,HMMSmart_IG,HMMPfam_ig	-	no_errors	
SLC11A2	4891	genome.wustl.edu	37	12	51384687	51384687	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	51384687	51384687	G	C	SNP	SLC11A2	NM_000617	human	genbank	57_37b	-1	validated	missense	c.1466	p.S489C	0.974	NULL	HMMPfam_Nramp	-	no_errors	
SLC12A5	57468	genome.wustl.edu	37	20	44678383	44678383	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	44678383	44678383	A	T	SNP	SLC12A5	NM_001134771	human	genbank	57_37b	+1	reviewed	missense	c.2204	p.E735V	1.000	NULL	HMMPfam_AA_permease	-	no_errors	
SLC16A6	9120	genome.wustl.edu	37	17	66274345	66274345	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	66274345	66274345	G	A	SNP	SLC16A6	NM_004694	human	genbank	57_37b	-1	provisional	silent	c.117	p.Y39	0.335	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors	
SLC23A1	9963	genome.wustl.edu	37	5	138715509	138715509	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	138715509	138715509	G	C	SNP	SLC23A1	NM_152685	human	genbank	57_37b	-1	reviewed	missense	c.795	p.I265M	0.999	HMMPfam_Xan_ur_permease	HMMPfam_Xan_ur_permease	-	no_errors	
SLC25A4	291	genome.wustl.edu	37	4	186066044	186066044	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	186066044	186066044	C	T	SNP	SLC25A4	NM_001151	human	genbank	57_37b	+1	reviewed	missense	c.238	p.R80C	1.000	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	superfamily_Mitoch_carrier,HMMPfam_Mito_carr	-	no_errors	
SMG1	23049	genome.wustl.edu	37	16	18846446	18846446	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	18846446	18846446	A	G	SNP	SMG1	NM_015092	human	genbank	57_37b	-1	reviewed	missense	c.8098	p.C2700R	1.000	NULL	superfamily_ARM repeat,HMMPfam_HEAT,superfamily_Protein kinase-like (PK-like),HMMPfam_PI3_PI4_kinase,HMMSmart_SM00146,PatternScan_PI3_4_KINASE_2,HMMPfam_FATC	-	no_errors	
SSPO	23145	genome.wustl.edu	37	7	149516839	149516839	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	149516839	149516839	C	-	DEL	SSPO	ENST00000378016	human	ensembl	57_37b	+1	known	frame_shift_del	c.12041	p.W4015fs	1.000	superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1	HMMSmart_SM00216,HMMPfam_VWD,HMMPfam_C8,superfamily_Serine proterase inhibitors,HMMPfam_TIL,HMMSmart_SM00214,HMMSmart_SM00215,superfamily_PMP inhibitors,superfamily_LDL receptor-like module,HMMPfam_Ldl_recept_a,HMMSmart_SM00192,PatternScan_LDLRA_1,superfamily_TSP-1 type 1 repeat,HMMSmart_SM00209,HMMPfam_TSP_1,HMMPfam_VWC,HMMSmart_SM00231,superfamily_Galactose-binding domain-like,HMMPfam_F5_F8_type_C,PatternScan_BPTI_KUNITZ_1,PatternScan_GLYCO_HORMONE_BETA_1,PatternScan_EGF_1,PatternScan_VWFC_1	(deletion:cds_exon[149516806,149516973])	no_errors	
SYNE1	23345	genome.wustl.edu	37	6	152576053	152576053	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	152576053	152576053	G	A	SNP	SYNE1	NM_182961	human	genbank	57_37b	-1	reviewed	nonsense	c.19432	p.Q6478*	1.000	superfamily_Spectrin repeat	superfamily_Calponin-homology domain CH-domain,HMMPfam_CH,PatternScan_ACTININ_1,HMMSmart_SM00033,PatternScan_ACTININ_2,superfamily_Spectrin repeat,HMMSmart_SM00150,HMMPfam_Spectrin,HMMPfam_KASH	-	no_errors	
TACC3	10460	genome.wustl.edu	37	4	1729660	1729660	+	Silent	SNP	C	C	T	rs1063742	byCluster;byFrequency;by1000genomes	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	1729660	1729660	C	T	SNP	TACC3	NM_006342	human	genbank	57_37b	+1	reviewed	silent	c.531	p.S177	0.038	NULL	HMMPfam_TACC	-		
TADA3	10474	genome.wustl.edu	37	3	9822135	9822135	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	9822135	9822135	C	T	SNP	TADA3	NM_006354	human	genbank	57_37b	-1	reviewed	missense	c.1205	p.R402Q	1.000	HMMPfam_Ada3	HMMPfam_Ada3	-	no_errors	
TAS2R9	50835	genome.wustl.edu	37	12	10961953	10961953	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	10961953	10961953	A	T	SNP	TAS2R9	NM_023917	human	genbank	57_37b	-1	reviewed	missense	c.722	p.L241H	0.011	HMMPfam_TAS2R,superfamily_SSF81321	HMMPfam_TAS2R,superfamily_SSF81321	-	no_errors	
TCEA1	6917	genome.wustl.edu	37	8	54900706	54900706	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	54900706	54900706	C	A	SNP	TCEA1	NM_006756	human	genbank	57_37b	-1	validated	missense	c.434	p.R145M	1.000	superfamily_Elongation factor TFIIS domain 2,HMMPfam_TFIIS_M,HMMSmart_SM00510	superfamily_Conserved domain common to transcription factors TFIIS elongin A CRSP70,HMMPfam_TFIIS,HMMSmart_SM00509,superfamily_Elongation factor TFIIS domain 2,HMMPfam_TFIIS_M,HMMSmart_SM00510,superfamily_Zinc beta-ribbon,HMMPfam_TFIIS_C,HMMSmart_SM00440,PatternScan_ZF_TFIIS_1	-	no_errors	
TCEB3CL	728929	genome.wustl.edu	37	18	44549025	44549026	+	Frame_Shift_Ins	INS	-	-	GC	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	44549025	44549026	-	GC	INS	TCEB3CL	NM_001100817	human	genbank	57_37b	-1	provisional	frame_shift_ins	c.1274_1273	p.Q425fs	1.000:1.000	HMMPfam_Elongin_A	HMMPfam_TFIIS,superfamily_TFIIS_conserved,HMMPfam_Elongin_A	-	no_errors	
TEC	7006	genome.wustl.edu	37	4	48230590	48230590	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	48230590	48230590	C	T	SNP	TEC	NM_003215	human	genbank	57_37b	-1	reviewed	silent	c.42	p.R14	0.966	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00107,HMMPfam_BTK,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2,superfamily_Protein kinase-like (PK-like),HMMPfam_Pkinase_Tyr,HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TFE3	7030	genome.wustl.edu	37	X	48896923	48896923	+	Silent	SNP	T	T	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	48896923	48896923	T	A	SNP	TFE3	NM_006521	human	genbank	57_37b	-1	reviewed	silent	c.243	p.S81	1.000	NULL	superfamily_HLH_basic,HMMPfam_HLH,HMMSmart_HLH	-	no_errors	
TFEC	22797	genome.wustl.edu	37	7	115580952	115580952	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	115580952	115580952	G	T	SNP	TFEC	NM_012252	human	genbank	57_37b	-1	validated	missense	c.697	p.P233T	1.000	NULL	superfamily_HLH helix-loop-helix DNA-binding domain,HMMPfam_HLH,HMMSmart_SM00353	-	no_errors	
TMEM107	84314	genome.wustl.edu	37	17	8077909	8077909	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	8077909	8077909	G	C	SNP	TMEM107	NM_032354	human	genbank	57_37b	-1	validated	silent	c.300	p.S100	0.137	NULL	NULL	-	no_errors	
TMEM87B	84910	genome.wustl.edu	37	2	112847241	112847241	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	112847241	112847241	G	C	SNP	TMEM87B	NM_032824	human	genbank	57_37b	+1	validated	silent	c.978	p.L326	1.000	HMMPfam_Lung_7-TM_R	HMMPfam_Lung_7-TM_R	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7577566	7577567	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7577566	7577567	-	A	INS	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	frame_shift_ins	c.715_714	p.N238fs	1.000:0.999	HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TP53BP2	7159	genome.wustl.edu	37	1	223989890	223989890	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	223989890	223989890	G	C	SNP	TP53BP2	NM_001031685	human	genbank	57_37b	-1	reviewed	missense	c.1153	p.Q385E	1.000	NULL	superfamily_ANK,HMMSmart_ANK,HMMPfam_Ank,HMMPfam_SH3_1,HMMSmart_SH3	-	no_errors	
TRAP1	10131	genome.wustl.edu	37	16	3729754	3729754	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	3729754	3729754	G	C	SNP	TRAP1	NM_016292	human	genbank	57_37b	-1	validated	missense	c.509	p.S170C	1.000	superfamily_ATP_bd_ATPase,HMMPfam_HATPase_c,HMMSmart_HATPase_c	PatternScan_HSP90,superfamily_ATP_bd_ATPase,HMMPfam_HATPase_c,HMMSmart_HATPase_c,HMMPfam_HSP90,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_SSF110942	-	no_errors	
TRIM47	91107	genome.wustl.edu	37	17	73872166	73872166	+	Silent	SNP	T	T	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	73872166	73872166	T	G	SNP	TRIM47	NM_033452	human	genbank	57_37b	-1	validated	silent	c.1017	p.L339	0.004	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMPfam_zf-B_box,HMMSmart_SM00336,superfamily_B-box zinc-binding domain	-	no_errors	
TTF2	8458	genome.wustl.edu	37	1	117618186	117618186	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	117618186	117618186	G	C	SNP	TTF2	NM_003594	human	genbank	57_37b	+1	reviewed	missense	c.980	p.G327A	0.010	NULL	HMMPfam_zf-GRF,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_SNF2_N,PatternScan_DEAH_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors	
TTLL7	79739	genome.wustl.edu	37	1	84356005	84356005	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	84356005	84356005	C	T	SNP	TTLL7	NM_024686	human	genbank	57_37b	-1	validated	missense	c.2368	p.G790R	1.000	NULL	HMMPfam_TTL,superfamily_Glutathione synthetase ATP-binding domain-like	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179501201	179501201	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179501201	179501201	G	A	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	silent	c.33549	p.S11183	0.174	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TUBE1	51175	genome.wustl.edu	37	6	112397239	112397239	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	112397239	112397239	C	A	SNP	TUBE1	NM_016262	human	genbank	57_37b	-1	reviewed	missense	c.713	p.S238I	1.000	superfamily_Tubulin nucleotide-binding domain-like,HMMPfam_Tubulin	superfamily_Tubulin nucleotide-binding domain-like,HMMPfam_Tubulin,PatternScan_TUBULIN,superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C	-	no_errors	
UGT3A1	133688	genome.wustl.edu	37	5	35955951	35955951	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	35955951	35955951	C	T	SNP	UGT3A1	NM_152404	human	genbank	57_37b	-1	validated	missense	c.1091	p.R364H	0.000	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT,PatternScan_UDPGT	superfamily_UDP-Glycosyltransferase/glycogen phosphorylase,HMMPfam_UDPGT,PatternScan_UDPGT	-	no_errors	
WDR36	134430	genome.wustl.edu	37	5	110445999	110445999	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	110445999	110445999	C	G	SNP	WDR36	NM_139281	human	genbank	57_37b	+1	reviewed	missense	c.1606	p.Q536E	1.000	superfamily_WD40_like,HMMSmart_WD40	superfamily_Amine_DH_B_like,HMMSmart_WD40,HMMPfam_WD40,superfamily_WD40_like,PatternScan_WD_REPEATS_1,HMMPfam_Utp21	-	no_errors	
WDR64	128025	genome.wustl.edu	37	1	241912926	241912926	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	241912926	241912926	G	T	SNP	WDR64	NM_144625	human	genbank	57_37b	+1	validated	nonsense	c.802	p.E268*	0.851	superfamily_WD40 repeat-like	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors	
WDR64	128025	genome.wustl.edu	37	1	241953984	241953984	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	241953984	241953984	C	G	SNP	WDR64	NM_144625	human	genbank	57_37b	+1	validated	missense	c.1612	p.L538V	1.000	NULL	HMMSmart_SM00320,superfamily_WD40 repeat-like,HMMPfam_WD40	-	no_errors	
XPO5	57510	genome.wustl.edu	37	6	43491629	43491629	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	43491629	43491629	G	T	SNP	XPO5	NM_020750	human	genbank	57_37b	-1	validated	missense	c.3592	p.L1198M	0.896	NULL	superfamily_ARM repeat,HMMPfam_Xpo1	-	no_errors	
ZC3H12C	85463	genome.wustl.edu	37	11	110035764	110035764	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	110035764	110035764	C	T	SNP	ZC3H12C	NM_033390	human	genbank	57_37b	+1	validated	missense	c.1954	p.P652S	0.914	NULL	NULL	-	no_errors	
ZFPM2	23414	genome.wustl.edu	37	8	106814808	106814808	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	106814808	106814808	G	C	SNP	ZFPM2	NM_012082	human	genbank	57_37b	+1	reviewed	missense	c.2498	p.S833T	1.000	NULL	superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF30	90075	genome.wustl.edu	37	19	35435393	35435393	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	35435393	35435393	G	C	SNP	ZNF30	NM_001099437	human	genbank	57_37b	+1	validated	missense	c.1526	p.G509A	0.997	superfamily_C2H2 and C2HC zinc fingers	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF565	147929	genome.wustl.edu	37	19	36673699	36673699	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	36673699	36673699	G	T	SNP	ZNF565	NM_001042474	human	genbank	57_37b	-1	validated	missense	c.1169	p.P390H	1.000	superfamily_SSF57667	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZNF570	148268	genome.wustl.edu	37	19	37975362	37975362	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	37975362	37975362	A	C	SNP	ZNF570	NM_144694	human	genbank	57_37b	+1	provisional	silent	c.838	p.R280	1.000	superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	superfamily_KRAB domain (Kruppel-associated box Pfam 01352),HMMPfam_KRAB,HMMSmart_SM00349,superfamily_C2H2 and C2HC zinc fingers,HMMPfam_zf-C2H2,HMMSmart_SM00355,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
ZRANB2	9406	genome.wustl.edu	37	1	71532605	71532605	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A08R-01A-11W-A050-09	TCGA-A8-A08R-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	71532605	71532605	C	A	SNP	ZRANB2	NM_203350	human	genbank	57_37b	-1	validated	missense	c.783	p.R261S	1.000	NULL	superfamily_Znf265 first zinc-finger domain,HMMPfam_zf-RanBP,HMMSmart_SM00547,PatternScan_ZF_RANBP2_1	-	no_errors	
