Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
AHNAK2	113146	genome.wustl.edu	37	14	105413154	105413154	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	105413154	105413154	G	A	SNP	AHNAK2	NM_138420	human	genbank	57_37b	-1	validated	silent	c.8634	p.D2878	0.000	NULL	superfamily_PDZ domain-like,HMMPfam_PDZ,HMMSmart_SM00228,HMMPfam_Involucrin	-	no_errors	
ALG10B	144245	genome.wustl.edu	37	12	38714107	38714107	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	38714107	38714107	C	T	SNP	ALG10B	NM_001013620	human	genbank	57_37b	+1	validated	missense	c.514	p.H172Y	1.000	HMMPfam_DIE2_ALG10	HMMPfam_DIE2_ALG10	-	no_errors	
ANGPT1	284	genome.wustl.edu	37	8	108359214	108359214	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	108359214	108359214	G	C	SNP	ANGPT1	NM_001146	human	genbank	57_37b	-1	reviewed	missense	c.409	p.Q137E	1.000	NULL	HMMSmart_SM00186,superfamily_Fibrinogen C-terminal domain-like,HMMPfam_Fibrinogen_C,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors	
ARMCX5	64860	genome.wustl.edu	37	X	101858440	101858440	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	101858440	101858440	G	A	SNP	ARMCX5	NM_022838	human	genbank	57_37b	+1	validated	silent	c.1371	p.S457	0.001	HMMPfam_DUF634,superfamily_ARM repeat	PatternScan_CPSASE_2,HMMPfam_DUF634,superfamily_ARM repeat	-	no_errors	
ARPP21	0	genome.wustl.edu	37	3	35729359	35729359	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	35729359	35729359	C	G	SNP	ARPP21	NM_016300	human	genbank	57_37b	+1	validated	missense	c.390	p.I130M	1.000	NULL	HMMSmart_SM00393,superfamily_R3H domain,HMMPfam_R3H	-	no_errors	
ATP13A4	84239	genome.wustl.edu	37	3	193185105	193185105	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	193185105	193185105	C	T	SNP	ATP13A4	NM_032279	human	genbank	57_37b	-1	validated	missense	c.1114	p.G372R	1.000	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A	superfamily_Calcium ATPase transmembrane domain M,HMMPfam_Cation_ATPase_N,HMMPfam_E1-E2_ATPase,superfamily_Calcium ATPase transduction domain A,PatternScan_ATPASE_E1_E2,superfamily_Metal cation-transporting ATPase ATP-binding domain N,superfamily_HAD-like	-	no_errors	
BOC	91653	genome.wustl.edu	37	3	113004392	113004392	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	113004392	113004392	G	T	SNP	BOC	NM_033254	human	genbank	57_37b	+1	validated	missense	c.3137	p.W1046L	0.997	PatternScan_N6_MTASE	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig,HMMPfam_V-set,HMMPfam_I-set,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_N6_MTASE,PatternScan_CYTOCHROME_P450	-	no_errors	
C1orf135	79000	genome.wustl.edu	37	1	26162139	26162139	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	26162139	26162139	G	A	SNP	C1orf135	NM_024037	human	genbank	57_37b	-1	provisional	missense	c.419	p.S140F	0.239	NULL	NULL	-	no_errors	
C5orf41	153222	genome.wustl.edu	37	5	172537652	172537652	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	172537652	172537652	C	T	SNP	C5orf41	NM_153607	human	genbank	57_37b	+1	validated	silent	c.1545	p.V515	1.000	NULL	PatternScan_BZIP_BASIC	-	no_errors	
CDH6	1004	genome.wustl.edu	37	5	31305333	31305333	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	31305333	31305333	A	G	SNP	CDH6	NM_004932	human	genbank	57_37b	+1	reviewed	missense	c.1052	p.N351S	1.000	superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112	superfamily_Cadherin-like,HMMSmart_SM00112,HMMPfam_Cadherin,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
CDH9	1007	genome.wustl.edu	37	5	26902585	26902585	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	26902585	26902585	T	C	SNP	CDH9	NM_016279	human	genbank	57_37b	-1	reviewed	missense	c.1253	p.K418R	1.000	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	superfamily_Cadherin,HMMSmart_CA,HMMPfam_Cadherin,PatternScan_CADHERIN_1,HMMPfam_Cadherin_C	-	no_errors	
CDK7	1022	genome.wustl.edu	37	5	68551332	68551332	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	68551332	68551332	G	A	SNP	CDK7	NM_001799	human	genbank	57_37b	+1	validated	missense	c.274	p.D92N	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
CENPE	1062	genome.wustl.edu	37	4	104080339	104080339	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	104080339	104080339	G	A	SNP	CENPE	NM_001813	human	genbank	57_37b	-1	validated	missense	c.2429	p.S810L	0.000	NULL	HMMSmart_SM00129,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1,PatternScan_AA_TRNA_LIGASE_I	-	no_errors	
CEP57	9702	genome.wustl.edu	37	11	95552061	95552061	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	95552061	95552061	C	G	SNP	CEP57	NM_014679	human	genbank	57_37b	+1	validated	missense	c.692	p.A231G	1.000	HMMPfam_DUF1167	HMMPfam_DUF1167	-	no_errors	
CLEC18B	0	genome.wustl.edu	37	16	74451960	74451960	+	Silent	SNP	C	C	T	rs3869429	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	74451960	74451960	C	T	SNP	CLEC18B	NM_001011880	human	genbank	57_37b	-1	validated	silent	c.453	p.T151	0.578	superfamily_PR-1-like,HMMSmart_SM00198,HMMPfam_SCP	superfamily_PR-1-like,HMMSmart_SM00198,HMMPfam_SCP,HMMSmart_SM00181,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00034,superfamily_C-type lectin-like,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1	-		
CNKSR1	10256	genome.wustl.edu	37	1	26509860	26509860	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	26509860	26509860	G	A	SNP	CNKSR1	NM_006314	human	genbank	57_37b	+1	reviewed	silent	c.708	p.Q236	0.940	superfamily_PDZ domain-like	superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_2,HMMPfam_CRIC_ras_sig,superfamily_PDZ domain-like,superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors	
CUX1	1523	genome.wustl.edu	37	7	101844815	101844815	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	101844815	101844815	G	A	SNP	CUX1	NM_181552	human	genbank	57_37b	+1	reviewed	silent	c.2238	p.L746	0.000	NULL	superfamily_lambda repressor-like DNA-binding domains,HMMPfam_CUT,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
DCAF4L2	138009	genome.wustl.edu	37	8	88885242	88885242	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	88885242	88885242	C	T	SNP	DCAF4L2	NM_152418	human	genbank	57_37b	-1	validated	missense	c.958	p.V320M	0.976	superfamily_WD40_like,HMMSmart_WD40	PatternScan_WD_REPEATS_1,superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40	-	no_errors	
DLGAP4	22839	genome.wustl.edu	37	20	35155390	35155390	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	35155390	35155390	G	A	SNP	DLGAP4	NM_014902	human	genbank	57_37b	+1	reviewed	missense	c.2926	p.D976N	1.000	HMMPfam_GKAP	HMMPfam_GKAP	-	no_errors	
DNAH17	8632	genome.wustl.edu	37	17	76472688	76472688	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	76472688	76472688	C	G	SNP	DNAH17	ENST00000389840	human	ensembl	57_37b	-1	known	missense	c.8078	p.R2693T	0.042	superfamily_P-loop containing nucleoside triphosphate hydrolases	HMMPfam_DHC_N1,superfamily_Spectrin repeat,HMMPfam_DHC_N2,superfamily_P-loop containing nucleoside triphosphate hydrolases,PatternScan_THIOL_PROTEASE_HIS,HMMPfam_AAA_5,PatternScan_WD_REPEATS_1,HMMPfam_Dynein_heavy	-	no_errors	
DOK5	55816	genome.wustl.edu	37	20	53260054	53260054	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	53260054	53260054	C	T	SNP	DOK5	NM_018431	human	genbank	57_37b	+1	reviewed	missense	c.793	p.R265C	0.998	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233,HMMSmart_SM00310,HMMPfam_IRS	-	no_errors	
ECHS1	1892	genome.wustl.edu	37	10	135179586	135179586	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	135179586	135179586	C	T	SNP	ECHS1	NM_004092	human	genbank	57_37b	-1	reviewed	silent	c.633	p.K211	0.990	superfamily_SSF52096,HMMPfam_ECH	superfamily_SSF52096,HMMPfam_ECH,PatternScan_ENOYL_COA_HYDRATASE	-	no_errors	
ENSG00000166787	0	genome.wustl.edu	37	11	18134218	18134218	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	18134218	18134218	C	G	SNP	ENSG00000166787	ENST00000278207	human	ensembl	57_37b	-1	known	missense	c.312	p.Q104H	0.998	HMMPfam_SAA,HMMSmart_SM00197	HMMPfam_SAA,HMMSmart_SM00197	-	no_errors	
ENSG00000210082	0	genome.wustl.edu	37	MT	3127	3127	+	RNA	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	MT	3127	3127	G	A	SNP	ENSG00000210082	ENST00000387347	human	ensembl	57_37b	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	
ENSG00000212712	0	genome.wustl.edu	37	18	12057389	12057389	+	Silent	SNP	C	G	G	rs9959781	byCluster;by2Hit2Allele;by1000genomes	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	12057389	12057389	C	G	SNP	ENSG00000212712	ENST00000391405	human	ensembl	57_37b	-1	known	silent	c.351	p.A117	0.998	NULL	NULL	-		
ENSG00000227087	0	genome.wustl.edu	37	5	79627880	79627880	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	79627880	79627880	C	G	SNP	ENSG00000227087	ENST00000424312	human	ensembl	57_37b	-1	known	missense	c.481	p.E161Q	1.000	NULL	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
EPHA8	2046	genome.wustl.edu	37	1	22903295	22903295	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	22903295	22903295	G	A	SNP	EPHA8	NM_020526	human	genbank	57_37b	+1	reviewed	missense	c.745	p.A249T	1.000	PatternScan_RECEPTOR_TYR_KIN_V_2	superfamily_Gal_bind_like,HMMPfam_Ephrin_lbd,HMMSmart_EPH_lbd,PatternScan_RECEPTOR_TYR_KIN_V_1,PatternScan_RECEPTOR_TYR_KIN_V_2,PatternScan_EGF_2,superfamily_FN_III-like,HMMSmart_FN3,HMMPfam_fn3,superfamily_Kinase_like,HMMPfam_Pkinase_Tyr,HMMSmart_TyrKc,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_TYR,superfamily_SAM_homology,HMMSmart_SAM,HMMPfam_SAM_1	-	no_errors	
GAB3	139716	genome.wustl.edu	37	X	153925488	153925488	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	153925488	153925488	G	A	SNP	GAB3	NM_001081573	human	genbank	57_37b	-1	reviewed	missense	c.1346	p.S449L	1.000	NULL	superfamily_PH domain-like,HMMPfam_PH,HMMSmart_SM00233	-	no_errors	
GRAMD1B	57476	genome.wustl.edu	37	11	123481044	123481044	+	Silent	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	123481044	123481044	C	G	SNP	GRAMD1B	NM_020716	human	genbank	57_37b	+1	validated	silent	c.1488	p.L496	1.000	NULL	HMMPfam_GRAM,HMMSmart_SM00568	-	no_errors	
GTDC1	79712	genome.wustl.edu	37	2	144764838	144764838	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	144764838	144764838	A	G	SNP	GTDC1	NM_001006636	human	genbank	57_37b	-1	validated	silent	c.786	p.N262	0.000	NULL	HMMPfam_Glycos_transf_1,superfamily_UDP-Glycosyltransferase/glycogen phosphorylase	-	no_errors	
HPD	3242	genome.wustl.edu	37	12	122284816	122284816	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	122284816	122284816	G	A	SNP	HPD	NM_002150	human	genbank	57_37b	-1	reviewed	silent	c.783	p.G261	0.000	superfamily_Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase,HMMPfam_Glyoxalase	superfamily_Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase,HMMPfam_Glyoxalase	-	no_errors	
IGHV3-6	0	genome.wustl.edu	37	14	106237611	106237611	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	106237611	106237611	C	T	SNP	IGHV3-6	ENST00000454292	human	ensembl	57_37b	-1	known	missense	c.601	p.A201T	0.001	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_C1-set,HMMSmart_SM00407	HMMPfam_V-set,superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00406,HMMPfam_C1-set,HMMSmart_SM00407,PatternScan_IG_MHC	-	no_errors	
KCNB2	9312	genome.wustl.edu	37	8	73848476	73848476	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	73848476	73848476	G	A	SNP	KCNB2	NM_004770	human	genbank	57_37b	+1	reviewed	missense	c.886	p.V296M	1.000	superfamily_SSF81324,HMMPfam_Ion_trans	superfamily_BTB/POZ_fold,HMMSmart_BTB,HMMPfam_K_tetra,superfamily_SSF81324,HMMPfam_Ion_trans,HMMPfam_Kv2channel	-	no_errors	
KIAA0226	9711	genome.wustl.edu	37	3	197421375	197421375	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	197421375	197421375	C	G	SNP	KIAA0226	NM_001145642	human	genbank	57_37b	-1	validated	missense	c.1420	p.E474Q	0.998	NULL	HMMSmart_SM00593	-	no_errors	
KIAA0494	9813	genome.wustl.edu	37	1	47183644	47183644	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	47183644	47183644	G	A	SNP	KIAA0494	NM_014774	human	genbank	57_37b	-1	validated	missense	c.116	p.S39L	1.000	NULL	PatternScan_EF_HAND_1	-	no_errors	
KIAA1377	57562	genome.wustl.edu	37	11	101828905	101828905	+	Silent	SNP	A	A	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	101828905	101828905	A	C	SNP	KIAA1377	NM_020802	human	genbank	57_37b	+1	validated	silent	c.513	p.I171	1.000	NULL	NULL	-	no_errors	
KIF2A	3796	genome.wustl.edu	37	5	61643923	61643923	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	61643923	61643923	G	A	SNP	KIF2A	NM_001098511	human	genbank	57_37b	+1	validated	missense	c.208	p.E70K	1.000	NULL	superfamily_SSF52540,HMMSmart_KISc,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors	
KIF2C	11004	genome.wustl.edu	37	1	45227643	45227643	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	45227643	45227643	G	C	SNP	KIF2C	NM_006845	human	genbank	57_37b	+1	validated	missense	c.1739	p.R580T	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00129,HMMPfam_Kinesin	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00129,HMMPfam_Kinesin,PatternScan_KINESIN_MOTOR_DOMAIN1	-	no_errors	
KLHL12	59349	genome.wustl.edu	37	1	202862414	202862414	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	202862414	202862414	G	C	SNP	KLHL12	NM_021633	human	genbank	57_37b	-1	provisional	missense	c.1533	p.C511W	1.000	superfamily_Gal_oxid_central,HMMSmart_Kelch,HMMPfam_Kelch_1	superfamily_BTB/POZ_fold,HMMPfam_BTB,HMMSmart_BTB,HMMPfam_BACK,superfamily_Gal_oxid_central,HMMPfam_Kelch_1,HMMSmart_Kelch	-	no_errors	
LGSN	51557	genome.wustl.edu	37	6	63990178	63990178	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	63990178	63990178	G	A	SNP	LGSN	NM_016571	human	genbank	57_37b	-1	reviewed	silent	c.1278	p.A426	0.103	HMMPfam_Gln-synt_C,superfamily_Glutamine synthetase/guanido kinase	superfamily_Glutamine synthetase N-terminal domain,HMMPfam_Gln-synt_N,HMMPfam_Gln-synt_C,superfamily_Glutamine synthetase/guanido kinase	-	no_errors	
LOC100130736	0	genome.wustl.edu	37	15	29906211	29906211	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	29906211	29906211	G	C	SNP	LOC100130736	XM_001718646	human	genbank	57_37b	+1	model	missense	c.291	p.K97N	1.000	superfamily_Tubulin C-terminal domain-like	superfamily_Tubulin C-terminal domain-like,HMMPfam_Tubulin_C	-	no_errors	
LRP2BP	55805	genome.wustl.edu	37	4	186291899	186291899	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	186291899	186291899	G	A	SNP	LRP2BP	NM_018409	human	genbank	57_37b	-1	validated	silent	c.873	p.F291	1.000	superfamily_HCP-like	superfamily_HCP-like,HMMPfam_TPR_2,HMMSmart_SM00671,HMMPfam_Sel1	-	no_errors	
LRRK1	79705	genome.wustl.edu	37	15	101549212	101549212	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	101549212	101549212	C	T	SNP	LRRK1	NM_024652	human	genbank	57_37b	+1	validated	silent	c.933	p.D311	1.000	superfamily_L domain-like,HMMSmart_SM00364,HMMSmart_SM00369,HMMPfam_LRR_1	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,superfamily_L domain-like,HMMSmart_SM00364,HMMSmart_SM00369,HMMPfam_LRR_1,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_Miro,superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMPfam_Pkinase,HMMSmart_SM00220	-	no_errors	
MGAM	8972	genome.wustl.edu	37	7	141763364	141763364	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	141763364	141763364	G	A	SNP	MGAM	NM_004668	human	genbank	57_37b	+1	reviewed	silent	c.4323	p.L1441	0.998	HMMPfam_Glyco_hydro_31	HMMPfam_Trefoil,HMMPfam_Glyco_hydro_31	-	no_errors	
MMP3	4314	genome.wustl.edu	37	11	102708128	102708128	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	102708128	102708128	C	G	SNP	MMP3	NM_002422	human	genbank	57_37b	-1	reviewed	missense	c.1234	p.D412H	1.000	superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120	"HMMPfam_PG_binding_1,superfamily_PGBD-like,PatternScan_CYSTEINE_SWITCH,HMMSmart_SM00235,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Peptidase_M10,PatternScan_ZINC_PROTEASE,superfamily_Hemopexin-like domain,HMMPfam_Hemopexin,HMMSmart_SM00120,PatternScan_HEMOPEXIN"	-	no_errors	
MOBKL1A	92597	genome.wustl.edu	37	4	71844867	71844867	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	71844867	71844867	C	T	SNP	MOBKL1A	NM_173468	human	genbank	57_37b	+1	reviewed	silent	c.432	p.F144	1.000	HMMPfam_Mob1_phocein,superfamily_Mob1/phocein	HMMPfam_Mob1_phocein,superfamily_Mob1/phocein	-	no_errors	
MUC16	94025	genome.wustl.edu	37	19	9062767	9062767	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9062767	9062767	C	G	SNP	MUC16	NM_024690	human	genbank	57_37b	-1	validated	missense	c.24679	p.E8227Q	0.000	NULL	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors	
MYBPC1	4604	genome.wustl.edu	37	12	102025811	102025811	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	102025811	102025811	G	C	SNP	MYBPC1	NM_002465	human	genbank	57_37b	+1	validated	missense	c.451	p.E151Q	1.000	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	-	no_errors	
NPC1L1	29881	genome.wustl.edu	37	7	44579387	44579387	+	Silent	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	44579387	44579387	G	C	SNP	NPC1L1	NM_013389	human	genbank	57_37b	-1	reviewed	silent	c.609	p.L203	1.000	NULL	HMMPfam_Patched,superfamily_SSF82866	-	no_errors	
NTRK3	4916	genome.wustl.edu	37	15	88671941	88671941	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	88671941	88671941	C	A	SNP	NTRK3	NM_001012338	human	genbank	57_37b	-1	reviewed	splice_site	c.1228+1	e9+1	0.993	-	-	-	no_errors	
NUP188	23511	genome.wustl.edu	37	9	131721088	131721088	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	131721088	131721088	A	C	SNP	NUP188	NM_015354	human	genbank	57_37b	+1	validated	missense	c.380	p.D127A	1.000	HMMPfam_Nup188	HMMPfam_Nup188	-	no_errors	
PCDH11X	27328	genome.wustl.edu	37	X	91090834	91090834	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	91090834	91090834	G	C	SNP	PCDH11X	NM_032968	human	genbank	57_37b	+1	reviewed	missense	c.331	p.E111Q	1.000	HMMPfam_Cadherin_2	HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMPfam_Cadherin,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Protocadherin	-	no_errors	
PCDHGB4	8641	genome.wustl.edu	37	5	140769441	140769441	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140769441	140769441	G	A	SNP	PCDHGB4	NM_003736	human	genbank	57_37b	+1	reviewed	missense	c.1990	p.D664N	0.998	superfamily_Cadherin-like,HMMSmart_SM00112	HMMPfam_Cadherin_2,superfamily_Cadherin-like,HMMSmart_SM00112,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PDE4C	5143	genome.wustl.edu	37	19	18321933	18321933	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	18321933	18321933	C	T	SNP	PDE4C	NM_000923	human	genbank	57_37b	-1	validated	missense	c.1945	p.E649K	0.000	superfamily_HD-domain/PDEase-like	superfamily_HD-domain/PDEase-like,HMMSmart_SM00471,HMMPfam_PDEase_I,PatternScan_PDEASE_I	-	no_errors	
PGK1	5230	genome.wustl.edu	37	X	77373596	77373596	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	77373596	77373596	G	A	SNP	PGK1	NM_000291	human	genbank	57_37b	+1	reviewed	missense	c.570	p.M190I	1.000	HMMPfam_PGK,superfamily_Phosphoglycerate kinase	HMMPfam_PGK,superfamily_Phosphoglycerate kinase,PatternScan_PGLYCERATE_KINASE	-	no_errors	
PKP4	8502	genome.wustl.edu	37	2	159481540	159481540	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	159481540	159481540	G	A	SNP	PKP4	NM_003628	human	genbank	57_37b	+1	reviewed	missense	c.754	p.D252N	1.000	NULL	superfamily_ARM repeat,HMMPfam_Arm,HMMSmart_SM00185	-	no_errors	
PODN	127435	genome.wustl.edu	37	1	53544159	53544159	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	53544159	53544159	C	T	SNP	PODN	NM_153703	human	genbank	57_37b	+1	validated	missense	c.1121	p.A374V	0.624	superfamily_SSF52058,superfamily_SSF52047	superfamily_SSF52058,HMMPfam_LRRNT,HMMSmart_LRRNT,HMMSmart_LRR_TYP,HMMPfam_LRR_1,superfamily_SSF52047	-	no_errors	
PRDM1	639	genome.wustl.edu	37	6	106553664	106553664	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	106553664	106553664	C	A	SNP	PRDM1	NM_001198	human	genbank	57_37b	+1	reviewed	missense	c.1629	p.S543R	0.067	NULL	HMMPfam_SET,HMMSmart_SET,superfamily_SSF82199,PatternScan_AA_TRNA_LIGASE_I,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
PRDX1	5052	genome.wustl.edu	37	1	45980571	45980572	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	45980571	45980572	-	A	INS	PRDX1	NM_002574	human	genbank	57_37b	-1	reviewed	frame_shift_ins	c.357_356	p.L119fs	1.000:1.000	superfamily_Thioredoxin-like,HMMPfam_AhpC-TSA	superfamily_Thioredoxin-like,HMMPfam_AhpC-TSA,HMMPfam_1-cysPrx_C	-	no_errors	
PRKAA1	5562	genome.wustl.edu	37	5	40775557	40775557	+	Silent	SNP	A	A	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	40775557	40775557	A	G	SNP	PRKAA1	NM_206907	human	genbank	57_37b	-1	reviewed	silent	c.318	p.Y106	1.000	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase	superfamily_Kinase_like,HMMSmart_S_TKc,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
PRKRIR	5612	genome.wustl.edu	37	11	76063702	76063704	+	In_Frame_Del	DEL	TTC	TTC	-	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	TTC	TTC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	76063702	76063704	TTC	-	DEL	PRKRIR	NM_004705	human	genbank	57_37b	-1	provisional	in_frame_del	c.492_490	p.E164in_frame_del	0.895:0.999:1.000	NULL	HMMPfam_THAP,HMMSmart_SM00692,HMMPfam_hATC	(deletion:cds_exon[76061908,76063838])	no_errors	
R3HDM2	22864	genome.wustl.edu	37	12	57660598	57660598	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	57660598	57660598	G	A	SNP	R3HDM2	NM_014925	human	genbank	57_37b	-1	validated	silent	c.2005	p.L669	1.000	NULL	HMMSmart_SM00393,superfamily_R3H domain,HMMPfam_R3H	-	no_errors	
RBM26	64062	genome.wustl.edu	37	13	79932554	79932554	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	79932554	79932554	C	G	SNP	RBM26	NM_022118	human	genbank	57_37b	-1	validated	missense	c.1544	p.R515T	1.000	NULL	superfamily_SSF101233,HMMPfam_DUF1777,HMMPfam_zf-CCCH,HMMSmart_ZnF_C3H1,superfamily_SSF54928,HMMSmart_RRM	-	no_errors	
RHOXF2	84528	genome.wustl.edu	37	X	119292962	119292962	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	119292962	119292962	G	C	SNP	RHOXF2	NM_032498	human	genbank	57_37b	+1	provisional	missense	c.121	p.E41Q	0.000	NULL	superfamily_Homeodomain_like,HMMSmart_HOX,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
ROD1	9991	genome.wustl.edu	37	9	115030409	115030409	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	115030409	115030409	G	C	SNP	ROD1	NM_005156	human	genbank	57_37b	-1	validated	missense	c.355	p.P119A	1.000	superfamily_RNA-binding domain RBD,HMMSmart_SM00360	superfamily_RNA-binding domain RBD,HMMSmart_SM00360,HMMPfam_RRM_1	-	no_errors	
SELP	6403	genome.wustl.edu	37	1	169581514	169581514	+	Missense_Mutation	SNP	G	G	A	rs6124	byCluster	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	169581514	169581514	G	A	SNP	SELP	NM_003005	human	genbank	57_37b	-1	reviewed	missense	c.902	p.P301L	0.274	superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	HMMSmart_SM00034,superfamily_C-type lectin-like,HMMPfam_Lectin_C,PatternScan_C_TYPE_LECTIN_1,superfamily_EGF/Laminin,HMMPfam_EGF,PatternScan_EGF_1,PatternScan_EGF_2,superfamily_Complement control module/SCR domain,HMMPfam_Sushi,HMMSmart_SM00032	-		
SENP5	205564	genome.wustl.edu	37	3	196613257	196613257	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	196613257	196613257	A	C	SNP	SENP5	NM_152699	human	genbank	57_37b	+1	validated	missense	c.1205	p.Q402P	0.001	NULL	superfamily_Cysteine proteinases,HMMPfam_Peptidase_C48	-	no_errors	
SETMAR	6419	genome.wustl.edu	37	3	4355372	4355372	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	4355372	4355372	G	C	SNP	SETMAR	NM_006515	human	genbank	57_37b	+1	validated	missense	c.947	p.G316A	0.000	NULL	HMMSmart_SM00468,HMMPfam_Pre-SET,superfamily_SET domain,HMMPfam_SET,HMMSmart_SM00317,HMMPfam_Transposase_1	-	no_errors	
SETX	23064	genome.wustl.edu	37	9	135156918	135156918	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	9	135156918	135156918	T	C	SNP	SETX	NM_015046	human	genbank	57_37b	-1	reviewed	missense	c.6590	p.H2197R	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
SH2D2A	9047	genome.wustl.edu	37	1	156784032	156784032	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156784032	156784032	G	A	SNP	SH2D2A	NM_003975	human	genbank	57_37b	-1	validated	silent	c.363	p.F121	1.000	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	superfamily_SH2 domain,HMMSmart_SM00252,HMMPfam_SH2	-	no_errors	
SH2D2A	9047	genome.wustl.edu	37	1	156784112	156784112	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	156784112	156784112	G	A	SNP	SH2D2A	ENST00000392306	human	ensembl	57_37b	-1	known	missense	c.313	p.R105W	0.001	HMMPfam_SH2,HMMSmart_SH2,superfamily_SSF55550	HMMPfam_SH2,HMMSmart_SH2,superfamily_SSF55550	-	no_errors	
SPTA1	6708	genome.wustl.edu	37	1	158641868	158641868	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	158641868	158641868	C	A	SNP	SPTA1	NM_003126	human	genbank	57_37b	-1	reviewed	missense	c.1469	p.S490I	0.993	HMMPfam_Spectrin,superfamily_Spectrin repeat,HMMSmart_SM00150	superfamily_Spectrin repeat,HMMPfam_Spectrin,HMMSmart_SM00150,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326,superfamily_EF-hand,HMMPfam_efhand_Ca_insen	-	no_errors	
TP53	7157	genome.wustl.edu	37	17	7578271	7578271	+	Missense_Mutation	SNP	T	C	C	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7578271	7578271	T	C	SNP	TP53	NM_000546	human	genbank	57_37b	-1	reviewed	missense	c.578	p.H193R	0.998	HMMPfam_P53,superfamily_p53-like transcription factors	HMMPfam_P53_TAD,HMMPfam_P53,superfamily_p53-like transcription factors,PatternScan_P53,HMMPfam_P53_tetramer,superfamily_p53 tetramerization domain	-	no_errors	
TRIM53L	0	genome.wustl.edu	37	11	89578127	89578127	+	Silent	SNP	G	G	A	rs2175999	byCluster;byFrequency	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	89578127	89578127	G	A	SNP	TRIM53L	ENST00000359967	human	ensembl	57_37b	+1	known	silent	c.192	p.L64	0.002	superfamily_SSF57850	PatternScan_ZF_RING_1,superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,HMMPfam_zf-B_box,HMMSmart_BBOX	-		
TRIML1	339976	genome.wustl.edu	37	4	189068190	189068190	+	Silent	SNP	C	C	T	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	189068190	189068190	C	T	SNP	TRIML1	NM_178556	human	genbank	57_37b	+1	provisional	silent	c.1071	p.I357	0.984	HMMPfam_SPRY,HMMSmart_SPRY	superfamily_SSF57850,HMMSmart_RING,HMMPfam_zf-C3HC4,PatternScan_ZF_RING_1,HMMSmart_PRY,HMMPfam_SPRY,HMMSmart_SPRY	-	no_errors	
TSHR	7253	genome.wustl.edu	37	14	81609330	81609330	+	Missense_Mutation	SNP	C	C	A	rs121908882	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	14	81609330	81609330	C	A	SNP	TSHR	NM_000369	human	genbank	57_37b	+1	reviewed	missense	c.928	p.R310S	1.000	superfamily_L domain-like	superfamily_L domain-like,superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1,PatternScan_G_PROTEIN_RECEP_F1_1	-		
TYW1B	441250	genome.wustl.edu	37	7	72093976	72093976	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	72093976	72093976	G	A	SNP	TYW1B	ENST00000343721	human	ensembl	57_37b	-1	known	nonsense	c.391	p.R131*	0.987	HMMPfam_Radical_SAM	HMMPfam_Radical_SAM,HMMPfam_Wyosine_form	-	no_errors	
UBA3	9039	genome.wustl.edu	37	3	69113243	69113243	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	69113243	69113243	C	G	SNP	UBA3	NM_003968	human	genbank	57_37b	-1	reviewed	missense	c.448	p.D150H	1.000	superfamily_Activating enzymes of the ubiquitin-like proteins,HMMPfam_ThiF	superfamily_Activating enzymes of the ubiquitin-like proteins,HMMPfam_ThiF,PatternScan_UBIQUITIN_ACTIVAT_2,HMMPfam_UBACT,HMMPfam_E2_bind	-	no_errors	
WDR60	55112	genome.wustl.edu	37	7	158672659	158672659	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	158672659	158672659	G	A	SNP	WDR60	NM_018051	human	genbank	57_37b	+1	validated	silent	c.858	p.E286	0.264	superfamily_WD40 repeat-like	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors	
WRAP53	55135	genome.wustl.edu	37	17	7606072	7606072	+	Silent	SNP	C	A	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	7606072	7606072	C	A	SNP	WRAP53	NM_018081	human	genbank	57_37b	+1	validated	silent	c.1176	p.L392	0.971	superfamily_WD40_like,HMMSmart_WD40	PatternScan_WD_REPEATS_1,superfamily_WD40_like,HMMPfam_WD40,HMMSmart_WD40	-	no_errors	
ZFHX4	79776	genome.wustl.edu	37	8	77745629	77745629	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	77745629	77745629	G	A	SNP	ZFHX4	ENST00000399468	human	ensembl	57_37b	+1	known	silent	c.3381	p.L1127	0.994	NULL	HMMSmart_SM00355,PatternScan_SOMATOTROPIN_2,superfamily_C2H2 and C2HC zinc fingers,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2,HMMSmart_SM00451,superfamily_Homeodomain-like,HMMSmart_SM00389,HMMPfam_Homeobox,PatternScan_HOMEOBOX_1	-	no_errors	
ZNRF4	148066	genome.wustl.edu	37	19	5455667	5455667	+	Silent	SNP	G	G	A	novel	unknown	TCGA-A8-A09N-01A-11W-A019-09	TCGA-A8-A09N-10A-01W-A021-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	5455667	5455667	G	A	SNP	ZNRF4	NM_181710	human	genbank	57_37b	+1	validated	silent	c.165	p.P55	0.000	NULL	superfamily_Transferrin receptor ectodomain apical domain,HMMPfam_PA,superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4,PatternScan_EGF_2	-	no_errors	
