Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	chromosome_name_WU	start_WU	stop_WU	reference_WU	variant_WU	type_WU	gene_name_WU	transcript_name_WU	transcript_species_WU	transcript_source_WU	transcript_version_WU	strand_WU	transcript_status_WU	trv_type_WU	c_position_WU	amino_acid_change_WU	ucsc_cons_WU	domain_WU	all_domains_WU	deletion_substructures_WU	annotation_errors_WU	
ABCC12	94160	genome.wustl.edu	37	16	48180286	48180286	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	48180286	48180286	C	T	SNP	ABCC12	NM_033226	human	genbank	57_37b	-1	reviewed	missense	c.50	p.R17Q	0.000	NULL	superfamily_Multidrug resistance ABC transporter MsbA N-terminal domain,HMMPfam_ABC_membrane,superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_ABC_tran,PatternScan_ABC_TRANSPORTER_1	-	no_errors	
ACOX3	8310	genome.wustl.edu	37	4	8416065	8416065	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	8416065	8416065	T	G	SNP	ACOX3	NM_003501	human	genbank	57_37b	-1	validated	missense	c.497	p.N166T	1.000	superfamily_Acyl-CoA dehydrogenase NM domain-like,HMMPfam_Acyl-CoA_dh_M	superfamily_Acyl-CoA dehydrogenase NM domain-like,HMMPfam_Acyl-CoA_dh_M,HMMPfam_Acyl-CoA_dh_1,superfamily_Acyl-CoA dehydrogenase C-terminal domain-like,HMMPfam_ACOX	-	no_errors	
ADAM12	8038	genome.wustl.edu	37	10	127760205	127760205	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	127760205	127760205	C	T	SNP	ADAM12	NM_003474	human	genbank	57_37b	-1	reviewed	silent	c.1173	p.V391	1.000	"superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin"	"HMMPfam_Pep_M12B_propep,superfamily_Metalloproteases (""zincins"") catalytic domain,HMMPfam_Reprolysin,PatternScan_ZINC_PROTEASE,HMMPfam_Disintegrin,HMMSmart_SM00050,superfamily_Blood coagulation inhibitor (disintegrin),PatternScan_DISINTEGRIN_1,HMMSmart_SM00608,HMMPfam_ADAM_CR,HMMPfam_EGF_2"	-	no_errors	
AKAP8	10270	genome.wustl.edu	37	19	15472955	15472955	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	15472955	15472955	G	C	SNP	AKAP8	NM_005858	human	genbank	57_37b	-1	reviewed	missense	c.1268	p.T423S	0.995	HMMPfam_AKAP95	superfamily_SSF56935,HMMSmart_ZnF_C2H2,HMMPfam_AKAP95,HMMPfam_RII_binding_1	-	no_errors	
ANKRD30A	91074	genome.wustl.edu	37	10	37430800	37430800	+	Silent	SNP	T	T	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	37430800	37430800	T	A	SNP	ANKRD30A	NM_052997	human	genbank	57_37b	+1	validated	silent	c.807	p.P269	0.009	NULL	superfamily_Ankyrin repeat,HMMSmart_SM00248,HMMPfam_Ank,PatternScan_ASP_PROTEASE	-	no_errors	
ARPC1A	10552	genome.wustl.edu	37	7	98946502	98946502	+	Silent	SNP	G	G	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	98946502	98946502	G	T	SNP	ARPC1A	NM_006409	human	genbank	57_37b	+1	reviewed	silent	c.420	p.P140	0.018	superfamily_WD40 repeat-like,HMMPfam_WD40,HMMSmart_SM00320	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors	
ASZ1	136991	genome.wustl.edu	37	7	117067558	117067558	+	RNA	SNP	T	T	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	7	117067558	117067558	T	A	SNP	ASZ1	NR_023315	human	genbank	57_37b	-1	validated	rna	NULL	NULL	0.001	-	-	-	no_errors	
ATAD2B	54454	genome.wustl.edu	37	2	24046432	24046432	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	24046432	24046432	A	T	SNP	ATAD2B	NM_017552	human	genbank	57_37b	-1	validated	nonsense	c.1827	p.C609*	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_AAA	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00382,HMMPfam_AAA,PatternScan_AAA,superfamily_Bromodomain,HMMSmart_SM00297,HMMPfam_Bromodomain,PatternScan_BROMODOMAIN_1	-	no_errors	
AZI2	64343	genome.wustl.edu	37	3	28365652	28365652	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	28365652	28365652	G	A	SNP	AZI2	NM_022461	human	genbank	57_37b	-1	validated	missense	c.1060	p.P354S	1.000	NULL	NULL	-	no_errors	
C10orf2	56652	genome.wustl.edu	37	10	102748073	102748073	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	102748073	102748073	C	T	SNP	C10orf2	NM_021830	human	genbank	57_37b	+1	reviewed	missense	c.106	p.P36S	0.989	NULL	superfamily_P-loop containing nucleoside triphosphate hydrolases	-	no_errors	
C12orf40	283461	genome.wustl.edu	37	12	40076596	40076596	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	40076596	40076596	C	A	SNP	C12orf40	NM_001031748	human	genbank	57_37b	+1	validated	missense	c.870	p.N290K	0.000	NULL	NULL	-	no_errors	
C4orf17	84103	genome.wustl.edu	37	4	100443690	100443690	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	100443690	100443690	A	G	SNP	C4orf17	NM_032149	human	genbank	57_37b	+1	validated	missense	c.161	p.D54G	1.000	NULL	NULL	-	no_errors	
CAPS	828	genome.wustl.edu	37	19	5914711	5914713	+	In_Frame_Del	DEL	GCG	GCG	-	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	GCG	GCG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	5914711	5914713	GCG	-	DEL	CAPS	NM_004058	human	genbank	57_37b	+1	validated	in_frame_del	c.221_223	p.SG74in_frame_delR	0.737:0.741:0.995	superfamily_SSF47473,HMMSmart_EFh,PatternScan_EF_HAND_1	superfamily_SSF47473,HMMSmart_EFh,HMMPfam_efhand,PatternScan_EF_HAND_1	(deletion:cds_exon[5914574,5914751])	no_errors	
CCNE1	898	genome.wustl.edu	37	19	30313495	30313495	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	30313495	30313495	C	T	SNP	CCNE1	NM_001238	human	genbank	57_37b	+1	reviewed	silent	c.1095	p.D365	1.000	HMMPfam_Cyclin_C	superfamily_Cyclin-like,HMMPfam_Cyclin_N,PatternScan_CYCLINS,HMMSmart_SM00385,HMMPfam_Cyclin_C	-	no_errors	
CEP170	9859	genome.wustl.edu	37	1	243354442	243354442	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	243354442	243354442	G	C	SNP	CEP170	NM_014812	human	genbank	57_37b	-1	reviewed	missense	c.986	p.P329R	0.934	NULL	superfamily_SMAD/FHA domain,HMMSmart_SM00240,HMMPfam_FHA	-	no_errors	
COL4A2	1284	genome.wustl.edu	37	13	111155500	111155500	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	111155500	111155500	G	A	SNP	COL4A2	NM_001846	human	genbank	57_37b	+1	reviewed	missense	c.3910	p.A1304T	0.068	HMMPfam_Collagen	HMMPfam_Collagen,HMMPfam_C4,HMMSmart_C4,superfamily_C-type_lectin_fold	-	no_errors	
COL7A1	1294	genome.wustl.edu	37	3	48608296	48608296	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	48608296	48608296	G	A	SNP	COL7A1	NM_000094	human	genbank	57_37b	-1	reviewed	missense	c.7270	p.R2424W	1.000	HMMPfam_Collagen	superfamily_vWA-like,HMMSmart_SM00327,HMMPfam_VWA,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III,HMMPfam_Collagen,superfamily_BPTI-like,HMMPfam_Kunitz_BPTI,PatternScan_BPTI_KUNITZ_1	-	no_errors	
CROCC	9696	genome.wustl.edu	37	1	17263261	17263261	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	17263261	17263261	G	A	SNP	CROCC	NM_014675	human	genbank	57_37b	+1	validated	silent	c.1086	p.L362	0.997	NULL	superfamily_Prefoldin	-	no_errors	
DDX55	57696	genome.wustl.edu	37	12	124094567	124094567	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	124094567	124094567	C	G	SNP	DDX55	NM_020936	human	genbank	57_37b	+1	reviewed	missense	c.633	p.N211K	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMSmart_SM00487,HMMPfam_DEAD,PatternScan_DEAD_ATP_HELICASE,HMMSmart_SM00490,HMMPfam_Helicase_C	-	no_errors	
DEFB112	245915	genome.wustl.edu	37	6	50011348	50011348	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	50011348	50011348	A	T	SNP	DEFB112	NM_001037498	human	genbank	57_37b	-1	provisional	missense	c.282	p.N94K	0.000	NULL	NULL	-	no_errors	
DLGAP1	9229	genome.wustl.edu	37	18	3534227	3534227	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	3534227	3534227	T	G	SNP	DLGAP1	NM_004746	human	genbank	57_37b	-1	provisional	missense	c.2444	p.E815A	1.000	HMMPfam_GKAP	HMMPfam_GKAP	-	no_errors	
ENPP7	339221	genome.wustl.edu	37	17	77705071	77705071	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	77705071	77705071	T	C	SNP	ENPP7	NM_178543	human	genbank	57_37b	+1	validated	missense	c.170	p.M57T	1.000	superfamily_Alkaline_phosphatase_core,HMMPfam_Phosphodiest	superfamily_Alkaline_phosphatase_core,HMMPfam_Phosphodiest	-	no_errors	
ENSG00000211515	0	genome.wustl.edu	37	17	58888380	58888380	+	RNA	SNP	A	A	G	rs9913434	byCluster;by1000genomes	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	58888380	58888380	A	G	SNP	ENSG00000211515	ENST00000390181	human	ensembl	57_37b	+1	novel	rna	NULL	NULL	0.853	-	-	-		
ENSG00000213701	0	genome.wustl.edu	37	5	96392778	96392778	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	96392778	96392778	C	T	SNP	ENSG00000213701	ENST00000395767	human	ensembl	57_37b	-1	known	missense	c.188	p.S63N	1.000	HMMPfam_NAP	HMMPfam_NAP	-	no_errors	
ENSG00000229292	0	genome.wustl.edu	37	19	56284202	56284202	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	56284202	56284202	G	A	SNP	ENSG00000229292	ENST00000341750	human	ensembl	57_37b	+1	known	missense	c.521	p.R174Q	0.000	HMMPfam_SPRY,HMMSmart_SM00449	superfamily_RING/U-box,HMMSmart_SM00589,HMMPfam_SPRY,HMMSmart_SM00449	-	no_errors	
EXO1	9156	genome.wustl.edu	37	1	242030258	242030258	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	242030258	242030258	T	G	SNP	EXO1	NM_006027	human	genbank	57_37b	+1	reviewed	missense	c.1168	p.L390V	0.000	NULL	HMMPfam_XPG_N,HMMSmart_SM00485,superfamily_PIN domain-like,PatternScan_XPG_1,HMMSmart_SM00484,HMMPfam_XPG_I,PatternScan_XPG_2,superfamily_5' to 3' exonuclease C-terminal subdomain,HMMSmart_SM00279	-	no_errors	
F5	2153	genome.wustl.edu	37	1	169541502	169541502	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	169541502	169541502	C	G	SNP	F5	NM_000130	human	genbank	57_37b	-1	reviewed	missense	c.330	p.L110F	0.991	superfamily_Cupredoxins,HMMPfam_Cu-oxidase_3	superfamily_Cupredoxins,HMMPfam_Cu-oxidase_3,PatternScan_MULTICOPPER_OXIDASE1,HMMPfam_LSPR,superfamily_Galactose-binding domain-like,HMMSmart_SM00231,HMMPfam_F5_F8_type_C,PatternScan_FA58C_1,PatternScan_FA58C_2	-	no_errors	
FAM98A	25940	genome.wustl.edu	37	2	33810243	33810243	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	33810243	33810243	C	G	SNP	FAM98A	NM_015475	human	genbank	57_37b	-1	validated	missense	c.1157	p.G386A	1.000	NULL	HMMPfam_DUF2465	-	no_errors	
FCRL5	83416	genome.wustl.edu	37	1	157512676	157512676	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	157512676	157512676	T	A	SNP	FCRL5	NM_031281	human	genbank	57_37b	-1	validated	missense	c.1096	p.S366C	0.017	superfamily_Immunoglobulin,HMMSmart_SM00409	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_ig	-	no_errors	
GABRA4	2557	genome.wustl.edu	37	4	46973128	46973128	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	46973128	46973128	T	C	SNP	GABRA4	NM_000809	human	genbank	57_37b	-1	reviewed	silent	c.846	p.K282	0.998	superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	superfamily_Neur_chan_LBD,HMMPfam_Neur_chan_LBD,PatternScan_NEUROTR_ION_CHANNEL,superfamily_Neu_channel_TM,HMMPfam_Neur_chan_memb	-	no_errors	
GLIS1	148979	genome.wustl.edu	37	1	54059934	54059934	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	54059934	54059934	C	T	SNP	GLIS1	NM_147193	human	genbank	57_37b	-1	validated	silent	c.642	p.R214	1.000	superfamily_SSF57667,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_SSF57667,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,HMMPfam_zf-C2H2	-	no_errors	
GNPTAB	79158	genome.wustl.edu	37	12	102159023	102159023	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	102159023	102159023	G	C	SNP	GNPTAB	NM_024312	human	genbank	57_37b	-1	validated	missense	c.1672	p.P558A	1.000	NULL	HMMSmart_SM00004,HMMPfam_Notch,superfamily_Notch domain,HMMPfam_DMAP_binding,PatternScan_EF_HAND_1	-	no_errors	
GNPTG	84572	genome.wustl.edu	37	16	1412250	1412250	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	1412250	1412250	C	G	SNP	GNPTG	NM_032520	human	genbank	57_37b	+1	reviewed	missense	c.455	p.S152C	0.997	superfamily_Mannose 6-phosphate receptor domain	superfamily_Mannose 6-phosphate receptor domain,HMMPfam_PRKCSH	-	no_errors	
GON4L	54856	genome.wustl.edu	37	1	155744795	155744795	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155744795	155744795	G	C	SNP	GON4L	NM_001037533	human	genbank	57_37b	-1	validated	missense	c.2348	p.T783S	0.990	NULL	superfamily_PAH2 domain,HMMPfam_PAH,superfamily_Homeodomain-like	-	no_errors	
GRIN2B	2904	genome.wustl.edu	37	12	13768083	13768083	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	13768083	13768083	C	T	SNP	GRIN2B	NM_000834	human	genbank	57_37b	-1	reviewed	missense	c.1619	p.R540H	1.000	superfamily_SSF53850,HMMSmart_PBPe	superfamily_SSF53822,superfamily_SSF53850,HMMSmart_PBPe,HMMPfam_Lig_chan-Glu_bd,HMMPfam_Lig_chan,HMMPfam_NMDAR2_C	-	no_errors	
HLA-DQB2	3120	genome.wustl.edu	37	6	32724075	32724075	+	RNA	SNP	A	A	G	rs116095889	byCluster;by1000genomes	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32724075	32724075	A	G	SNP	HLA-DQB2	NR_003937	human	genbank	57_37b	-1	provisional	rna	NULL	NULL	0.000	-	-	-		
IL1RAPL2	26280	genome.wustl.edu	37	X	104961445	104961445	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	104961445	104961445	G	A	SNP	IL1RAPL2	NM_017416	human	genbank	57_37b	+1	reviewed	silent	c.858	p.K286	1.000	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig	superfamily_Immunoglobulin,HMMSmart_SM00409,HMMPfam_ig,superfamily_Toll/Interleukin receptor TIR domain,HMMSmart_SM00255,HMMPfam_TIR	-	no_errors	
IPO9	55705	genome.wustl.edu	37	1	201798352	201798352	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	201798352	201798352	G	A	SNP	IPO9	NM_018085	human	genbank	57_37b	+1	validated	silent	c.15	p.A5	0.994	NULL	superfamily_ARM repeat,HMMPfam_IBN_N	-	no_errors	
ITGB4	3691	genome.wustl.edu	37	17	73738675	73738675	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	73738675	73738675	T	A	SNP	ITGB4	NM_000213	human	genbank	57_37b	+1	reviewed	missense	c.2795	p.M932K	1.000	NULL	HMMSmart_SM00423,HMMPfam_Integrin_beta,HMMSmart_SM00187,superfamily_vWA-like,superfamily_Integrin domains,superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_INTEGRIN_BETA,HMMPfam_EGF_2,superfamily_Integrin beta tail domain,HMMPfam_Integrin_B_tail,HMMPfam_Calx-beta,HMMSmart_SM00237,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III	-	no_errors	
ITGB5	3693	genome.wustl.edu	37	3	124567323	124567323	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	124567323	124567323	C	G	SNP	ITGB5	NM_002213	human	genbank	57_37b	-1	provisional	silent	c.444	p.L148	1.000	HMMPfam_Integrin_beta,HMMSmart_INB,superfamily_SSF53300,HMMSmart_VWA	HMMSmart_PSI,HMMPfam_Integrin_beta,HMMSmart_INB,superfamily_SSF53300,HMMSmart_VWA,superfamily_SSF69179,HMMPfam_EGF_2,PatternScan_EGF_1,PatternScan_EGF_2,PatternScan_INTEGRIN_BETA,superfamily_SSF57196,HMMSmart_EGF,superfamily_Integrin_bsu_tail,HMMPfam_Integrin_B_tail,HMMPfam_Integrin_b_cyt	-	no_errors	
KATNB1	10300	genome.wustl.edu	37	16	57775730	57775730	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	57775730	57775730	G	A	SNP	KATNB1	NM_005886	human	genbank	57_37b	+1	reviewed	splice_site	c.171+1	e2+1	1.000	-	-	-	no_errors	
KIAA0947	23379	genome.wustl.edu	37	5	5464610	5464610	+	Silent	SNP	G	A	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	5464610	5464610	G	A	SNP	KIAA0947	NM_015325	human	genbank	57_37b	+1	validated	silent	c.5163	p.P1721	0.413	NULL	NULL	-	no_errors	
KLHL38	340359	genome.wustl.edu	37	8	124664078	124664078	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	124664078	124664078	C	G	SNP	KLHL38	NM_001081675	human	genbank	57_37b	-1	validated	missense	c.1089	p.W363C	1.000	superfamily_Galactose oxidase central domain,HMMPfam_Kelch_1,HMMSmart_SM00612	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,HMMPfam_BACK,superfamily_Galactose oxidase central domain,HMMSmart_SM00612,HMMPfam_Kelch_1	-	no_errors	
KRTAP10-11	386678	genome.wustl.edu	37	21	46066670	46066670	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	46066670	46066670	T	G	SNP	KRTAP10-11	NM_198692	human	genbank	57_37b	+1	validated	missense	c.295	p.C99G	0.874	HMMPfam_Keratin_B2	HMMPfam_Keratin_B2	-	no_errors	
KRTAP24-1	643803	genome.wustl.edu	37	21	31655047	31655061	+	In_Frame_Del	DEL	TGCTTCACCGTAGGA	TGCTTCACCGTAGGA	-	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	TGCTTCACCGTAGGA	TGCTTCACCGTAGGA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	31655047	31655061	TGCTTCACCGTAGGA	-	DEL	KRTAP24-1	NM_001085455	human	genbank	57_37b	-1	validated	in_frame_del	c.204_190	p.SYGEA64in_frame_del	0.000:0.000:0.000:0.025:0.496:0.514:0.396:0.335:0.090:0.180:0.280:0.873:0.962:0.968:0.957	HMMPfam_PMG	HMMPfam_PMG	(deletion:cds_exon[31654486,31655250])	no_errors	
LCA5L	150082	genome.wustl.edu	37	21	40794925	40794925	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	21	40794925	40794925	C	A	SNP	LCA5L	NM_152505	human	genbank	57_37b	-1	validated	missense	c.814	p.D272Y	1.000	NULL	NULL	-	no_errors	
LOC100287275	0	genome.wustl.edu	37	13	24895535	24895535	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	24895535	24895535	C	T	SNP	LOC100287275	XM_002343231	human	genbank	57_37b	-1	model	missense	c.80	p.S27N	0.001	NULL	NULL	-	no_errors	
LOC100287867	0	genome.wustl.edu	37	5	108784119	108784119	+	Silent	SNP	A	A	G	rs72794846	byCluster;byFrequency;by1000genomes	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	108784119	108784119	A	G	SNP	LOC100287867	XM_002342547	human	genbank	57_37b	-1	model	silent	c.102	p.A34	0.878	NULL	NULL	-		
LOC100288052	0	genome.wustl.edu	37	X	54841815	54841815	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	54841815	54841815	C	T	SNP	LOC100288052	XM_002344195	human	genbank	57_37b	-1	model	missense	c.337	p.E113K	0.592	NULL	NULL	-	no_errors	
LOC100289653	0	genome.wustl.edu	37	6	87606842	87606842	+	Missense_Mutation	SNP	G	G	A	rs1853639	byCluster;byFrequency;bySubmitter;by2Hit2Allele;by1000genomes	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	87606842	87606842	G	A	SNP	LOC100289653	XM_002342648	human	genbank	57_37b	+1	model	missense	c.7	p.A3T	0.000	NULL	superfamily_PH domain-like	-		
LOC100291517	0	genome.wustl.edu	37	16	1265025	1265025	+	Missense_Mutation	SNP	C	C	G	rs61382101	byCluster;byFrequency	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	1265025	1265025	C	G	SNP	LOC100291517	XM_002347685	human	genbank	57_37b	-1	model	missense	c.256	p.D86H	0.225	NULL	NULL	-		
LRBA	987	genome.wustl.edu	37	4	151223890	151223890	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	4	151223890	151223890	C	T	SNP	LRBA	NM_006726	human	genbank	57_37b	-1	validated	missense	c.7937	p.R2646H	1.000	superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	superfamily_ARM repeat,superfamily_Concanavalin A-like lectins/glucanases,HMMPfam_DUF1088,superfamily_PH domain-like,superfamily_BEACH domain,HMMPfam_Beach,superfamily_WD40 repeat-like,HMMSmart_SM00320,HMMPfam_WD40	-	no_errors	
LSM14B	149986	genome.wustl.edu	37	20	60708435	60708435	+	Missense_Mutation	SNP	G	C	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	60708435	60708435	G	C	SNP	LSM14B	NM_144703	human	genbank	57_37b	+1	validated	missense	c.1076	p.R359P	0.944	NULL	HMMPfam_DFDF,HMMPfam_FFD_TFG	-	no_errors	
MAPK4	5596	genome.wustl.edu	37	18	48255592	48255592	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	18	48255592	48255592	G	T	SNP	MAPK4	NM_002747	human	genbank	57_37b	+1	reviewed	missense	c.1132	p.V378L	1.000	NULL	superfamily_Protein kinase-like (PK-like),HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_ATP,PatternScan_PROTEIN_KINASE_ST	-	no_errors	
MBD5	55777	genome.wustl.edu	37	2	149247300	149247300	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	149247300	149247300	T	C	SNP	MBD5	NM_018328	human	genbank	57_37b	+1	validated	silent	c.3400	p.L1134	0.077	NULL	HMMSmart_SM00391,HMMPfam_MBD,superfamily_Tudor/PWWP/MBT,HMMPfam_PWWP	-	no_errors	
MFI2	4241	genome.wustl.edu	37	3	196748288	196748288	+	Silent	SNP	C	C	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	196748288	196748288	C	A	SNP	MFI2	NM_005929	human	genbank	57_37b	-1	reviewed	silent	c.699	p.L233	1.000	superfamily_Periplasmic binding protein-like II,HMMPfam_Transferrin,HMMSmart_SM00094	superfamily_Periplasmic binding protein-like II,HMMPfam_Transferrin,HMMSmart_SM00094,PatternScan_TRANSFERRIN_1,PatternScan_TRANSFERRIN_2,PatternScan_TRANSFERRIN_3	-	no_errors	
MIR634	0	genome.wustl.edu	37	17	64783222	64783222	+	RNA	SNP	G	G	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	64783222	64783222	G	C	SNP	MIR634	ENST00000385208	human	ensembl	57_37b	+1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	
MTMR12	54545	genome.wustl.edu	37	5	32274199	32274201	+	In_Frame_Del	DEL	CTG	CTG	-	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	CTG	CTG					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	32274199	32274201	CTG	-	DEL	MTMR12	NM_001040446	human	genbank	57_37b	-1	reviewed	in_frame_del	c.172_170	p.TV57in_frame_delI	1.000:0.998:1.000	superfamily_PH domain-like	superfamily_PH domain-like,superfamily_(Phosphotyrosine protein) phosphatases II,HMMPfam_Myotub-related	(deletion:cds_exon[32274086,32274228])	no_errors	
MUC16	94025	genome.wustl.edu	37	19	9065209	9065209	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	9065209	9065209	C	T	SNP	MUC16	NM_024690	human	genbank	57_37b	-1	validated	missense	c.22237	p.A7413T	0.000	NULL	PatternScan_ATPASE_ALPHA_BETA,superfamily_SEA domain,HMMSmart_SM00200,HMMPfam_SEA	-	no_errors	
MYNN	55892	genome.wustl.edu	37	3	169500356	169500356	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	169500356	169500356	C	T	SNP	MYNN	NM_018657	human	genbank	57_37b	+1	provisional	missense	c.1324	p.P442S	1.000	superfamily_C2H2 and C2HC zinc fingers	superfamily_POZ domain,HMMPfam_BTB,HMMSmart_SM00225,superfamily_C2H2 and C2HC zinc fingers,HMMSmart_SM00355,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
NOS1AP	9722	genome.wustl.edu	37	1	162326813	162326813	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	162326813	162326813	T	C	SNP	NOS1AP	NM_014697	human	genbank	57_37b	+1	reviewed	missense	c.826	p.S276P	0.004	NULL	superfamily_SSF50729,HMMSmart_PTB,HMMPfam_PID	-	no_errors	
NUSAP1	51203	genome.wustl.edu	37	15	41650380	41650380	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	15	41650380	41650380	A	G	SNP	NUSAP1	NM_016359	human	genbank	57_37b	+1	validated	missense	c.584	p.E195G	1.000	NULL	NULL	-	no_errors	
OR10S1	219873	genome.wustl.edu	37	11	123847945	123847945	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	123847945	123847945	T	A	SNP	OR10S1	NM_001004474	human	genbank	57_37b	-1	provisional	nonsense	c.454	p.R152*	0.001	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	superfamily_Family A G protein-coupled receptor-like,HMMPfam_7tm_1	-	no_errors	
OR10V1	390201	genome.wustl.edu	37	11	59480439	59480439	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	59480439	59480439	T	A	SNP	OR10V1	NM_001005324	human	genbank	57_37b	-1	provisional	missense	c.880	p.R294W	1.000	superfamily_SSF81321	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_7tm_1	-	no_errors	
PCDHB2	56133	genome.wustl.edu	37	5	140474886	140474886	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	140474886	140474886	A	T	SNP	PCDHB2	NM_018936	human	genbank	57_37b	+1	reviewed	missense	c.512	p.N171I	0.049	superfamily_Cadherin,HMMPfam_Cadherin,HMMSmart_CA	HMMPfam_Cadherin_2,superfamily_Cadherin,HMMSmart_CA,PatternScan_CADHERIN_1,HMMPfam_Cadherin	-	no_errors	
PCOTH	542767	genome.wustl.edu	37	13	24465799	24465799	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	24465799	24465799	G	A	SNP	PCOTH	NM_001135816	human	genbank	57_37b	+1	validated	missense	c.80	p.S27N	0.000	NULL	NULL	-	no_errors	
PHACTR4	65979	genome.wustl.edu	37	1	28800394	28800394	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	28800394	28800394	T	G	SNP	PHACTR4	NM_023923	human	genbank	57_37b	+1	reviewed	missense	c.1182	p.I394M	0.077	NULL	HMMSmart_RPEL,HMMPfam_RPEL	-	no_errors	
PHC3	80012	genome.wustl.edu	37	3	169854406	169854406	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	169854406	169854406	G	C	SNP	PHC3	NM_024947	human	genbank	57_37b	-1	validated	missense	c.720	p.S240R	1.000	NULL	superfamily_SAM/Pointed domain,HMMSmart_SM00454,HMMPfam_SAM_1	-	no_errors	
PRAMEF22	653606	genome.wustl.edu	37	1	13036693	13036693	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	13036693	13036693	A	G	SNP	PRAMEF22	NM_001100631	human	genbank	57_37b	+1	provisional	silent	c.765	p.E255	0.007	superfamily_SSF52047	superfamily_SSF52047	-	no_errors	
PRAMEF25	0	genome.wustl.edu	37	1	13141600	13141600	+	Silent	SNP	A	A	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	13141600	13141600	A	G	SNP	PRAMEF25	XM_497653	human	genbank	57_37b	+1	model	silent	c.759	p.E253	0.000	superfamily_SSF52047	superfamily_SSF52047	-	no_errors	
PRDM4	11108	genome.wustl.edu	37	12	108134960	108134960	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	12	108134960	108134960	G	A	SNP	PRDM4	NM_012406	human	genbank	57_37b	-1	reviewed	silent	c.1687	p.L563	1.000	HMMSmart_ZnF_C2H2	HMMSmart_SET,HMMSmart_ZnF_C2H2,superfamily_SSF57667,HMMPfam_zf-C2H2,PatternScan_ZINC_FINGER_C2H2_1	-	no_errors	
RNF43	54894	genome.wustl.edu	37	17	56435586	56435598	+	Frame_Shift_Del	DEL	GGGATCCCCTTTA	GGGATCCCCTTTA	-	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	GGGATCCCCTTTA	GGGATCCCCTTTA					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	17	56435586	56435598	GGGATCCCCTTTA	-	DEL	RNF43	NM_017763	human	genbank	57_37b	-1	validated	frame_shift_del	c.1551_1539	p.K514fs	0.027:0.010:0.012:0.019:0.040:0.126:0.167:0.514:0.511:0.515:0.866:0.883:0.637	NULL	superfamily_RING/U-box,HMMSmart_SM00184,HMMPfam_zf-C3HC4	(deletion:cds_exon[56434829,56436184])	no_errors	
RORC	6097	genome.wustl.edu	37	1	151787698	151787698	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	151787698	151787698	C	T	SNP	RORC	NM_005060	human	genbank	57_37b	-1	reviewed	missense	c.502	p.E168K	0.995	NULL	HMMSmart_SM00399,HMMPfam_zf-C4,superfamily_Glucocorticoid receptor-like (DNA-binding domain),PatternScan_NUCLEAR_REC_DBD_1,superfamily_Nuclear receptor ligand-binding domain,HMMSmart_SM00430,HMMPfam_Hormone_recep	-	no_errors	
RRP12	23223	genome.wustl.edu	37	10	99126551	99126551	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	99126551	99126551	C	G	SNP	RRP12	NM_015179	human	genbank	57_37b	-1	validated	missense	c.3163	p.E1055Q	1.000	NULL	superfamily_ARM repeat,HMMPfam_NUC173	-	no_errors	
RUSC1	23623	genome.wustl.edu	37	1	155298046	155298046	+	Silent	SNP	C	C	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	155298046	155298046	C	G	SNP	RUSC1	NM_001105203	human	genbank	57_37b	+1	validated	silent	c.2520	p.P840	0.579	superfamily_SH3-domain	HMMPfam_RUN,HMMSmart_SM00593,superfamily_SH3-domain,HMMPfam_SH3_1,HMMSmart_SM00326	-	no_errors	
SBSN	374897	genome.wustl.edu	37	19	36018958	36018958	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	36018958	36018958	C	T	SNP	SBSN	NM_198538	human	genbank	57_37b	-1	validated	missense	c.226	p.G76R	0.045	NULL	NULL	-	no_errors	
SF4	57794	genome.wustl.edu	37	19	19414553	19414553	+	Nonsense_Mutation	SNP	G	G	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	19414553	19414553	G	C	SNP	SF4	NM_172231	human	genbank	57_37b	-1	validated	nonsense	c.642	p.Y214*	1.000	superfamily_Surp module (SWAP domain Pfam 01805),HMMSmart_SM00648,HMMPfam_Surp	superfamily_Surp module (SWAP domain Pfam 01805),HMMSmart_SM00648,HMMPfam_Surp,HMMSmart_SM00443,HMMPfam_G-patch	-	no_errors	
SF4	57794	genome.wustl.edu	37	19	19414555	19414555	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	19414555	19414555	A	-	DEL	SF4	NM_172231	human	genbank	57_37b	-1	validated	frame_shift_del	c.640	p.Y214fs	1.000	superfamily_Surp module (SWAP domain Pfam 01805),HMMSmart_SM00648,HMMPfam_Surp	superfamily_Surp module (SWAP domain Pfam 01805),HMMSmart_SM00648,HMMPfam_Surp,HMMSmart_SM00443,HMMPfam_G-patch	(deletion:cds_exon[19414533,19414656])	no_errors	
SLC16A12	387700	genome.wustl.edu	37	10	91198842	91198842	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	91198842	91198842	T	C	SNP	SLC16A12	NM_213606	human	genbank	57_37b	-1	validated	missense	c.457	p.S153G	1.000	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	superfamily_MFS_gen_substrate_transporter,HMMPfam_MFS_1	-	no_errors	
SLC22A20	440044	genome.wustl.edu	37	11	64981472	64981472	+	Silent	SNP	G	G	C	rs239258	byCluster;byFrequency;by2Hit2Allele;byHapMap;by1000genomes	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	11	64981472	64981472	G	C	SNP	SLC22A20	NM_001004326	human	genbank	57_37b	+1	validated	silent	c.129	p.T43	0.990	NULL	superfamily_MFS general substrate transporter	-		
SLC26A9	115019	genome.wustl.edu	37	1	205898368	205898368	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	205898368	205898368	G	T	SNP	SLC26A9	NM_134325	human	genbank	57_37b	-1	reviewed	missense	c.834	p.H278Q	1.000	HMMPfam_Sulfate_transp	HMMPfam_Sulfate_transp,superfamily_STAS,HMMPfam_STAS	-	no_errors	
SLC30A8	169026	genome.wustl.edu	37	8	118169971	118169971	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	118169971	118169971	G	T	SNP	SLC30A8	NM_173851	human	genbank	57_37b	+1	reviewed	missense	c.460	p.V154L	1.000	HMMPfam_Cation_efflux	HMMPfam_Cation_efflux	-	no_errors	
SLC35C2	51006	genome.wustl.edu	37	20	44983581	44983582	+	In_Frame_Ins	INS	-	-	GCA	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	-	-					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	20	44983581	44983582	-	GCA	INS	SLC35C2	NM_015945	human	genbank	57_37b	-1	reviewed	in_frame_ins	c.601_600	p.200in_frame_insC	1.000:1.000	HMMPfam_TPT	PatternScan_ADH_SHORT,HMMPfam_TPT,superfamily_Multidrug resistance efflux transporter EmrE	-	no_errors	
SNCAIP	9627	genome.wustl.edu	37	5	121780331	121780331	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	5	121780331	121780331	G	T	SNP	SNCAIP	NM_005460	human	genbank	57_37b	+1	reviewed	missense	c.1496	p.R499L	1.000	superfamily_ANK	superfamily_ANK,HMMPfam_Ank,HMMSmart_ANK	-	no_errors	
SNTG1	54212	genome.wustl.edu	37	8	51449212	51449240	+	Splice_Site	DEL	ACGTTGAATATTTATCTTCCTTTCAGGAC	ACGTTGAATATTTATCTTCCTTTCAGGAC	-	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	ACGTTGAATATTTATCTTCCTTTCAGGAC	ACGTTGAATATTTATCTTCCTTTCAGGAC					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	8	51449212	51449240	ACGTTGAATATTTATCTTCCTTTCAGGAC	-	DEL	SNTG1	NM_018967	human	genbank	57_37b	+1	reviewed	splice_site_del	c.550-26_550-1	e9-1	0.000:0.000:0.000:0.000:0.030:0.047:0.062:0.000:0.000:0.000:0.001:0.000:0.001:0.000:0.000:0.000:0.000:0.000:0.000:0.000:0.122:0.123:0.059:0.996:1.000:1.000:1.000:1.000:1.000	-	-	(deletion:intron[51442820,51449237], cds_exon[51449238,51449368])	no_errors	
SYCE1L	0	genome.wustl.edu	37	16	77246517	77246517	+	Missense_Mutation	SNP	C	C	A	rs62049594	byCluster;by1000genomes	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	16	77246517	77246517	C	A	SNP	SYCE1L	NM_001129979	human	genbank	57_37b	+1	provisional	missense	c.628	p.P210T	0.000	NULL	NULL	-		
TACC2	10579	genome.wustl.edu	37	10	123842443	123842443	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	10	123842443	123842443	C	A	SNP	TACC2	NM_206862	human	genbank	57_37b	+1	reviewed	missense	c.428	p.A143D	0.000	NULL	HMMPfam_TACC	-	no_errors	
TCEAL5	340543	genome.wustl.edu	37	X	102528976	102528976	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	102528976	102528976	T	A	SNP	TCEAL5	NM_001012979	human	genbank	57_37b	-1	validated	missense	c.516	p.Q172H	0.901	HMMPfam_TFA	HMMPfam_TFA	-	no_errors	
TCN2	6948	genome.wustl.edu	37	22	31019054	31019054	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	22	31019054	31019054	C	A	SNP	TCN2	NM_000355	human	genbank	57_37b	+1	reviewed	missense	c.1206	p.N402K	0.960	NULL	HMMPfam_Cobalamin_bind,PatternScan_COBALAMIN_BINDING	-	no_errors	
TDRD5	163589	genome.wustl.edu	37	1	179659890	179659890	+	Silent	SNP	T	T	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	179659890	179659890	T	C	SNP	TDRD5	NM_173533	human	genbank	57_37b	+1	provisional	silent	c.2758	p.L920	0.006	NULL	HMMPfam_TUDOR,superfamily_Tudor/PWWP/MBT,HMMSmart_SM00333	-	no_errors	
TMEM131	23505	genome.wustl.edu	37	2	98428967	98428967	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	98428967	98428967	C	G	SNP	TMEM131	NM_015348	human	genbank	57_37b	-1	validated	missense	c.1780	p.V594L	0.996	NULL	NULL	-	no_errors	
TNXB	7148	genome.wustl.edu	37	6	32011575	32011575	+	Silent	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	32011575	32011575	C	T	SNP	TNXB	NM_019105	human	genbank	57_37b	-1	reviewed	silent	c.11475	p.S3825	0.003	HMMPfam_fn3,HMMSmart_SM00060,superfamily_Fibronectin type III	superfamily_EGF/Laminin,PatternScan_EGF_1,PatternScan_EGF_2,HMMSmart_SM00181,HMMPfam_EGF_2,HMMSmart_SM00060,HMMPfam_fn3,superfamily_Fibronectin type III,HMMSmart_SM00186,HMMPfam_Fibrinogen_C,superfamily_Fibrinogen C-terminal domain-like,PatternScan_FIBRIN_AG_C_DOMAIN	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179576811	179576811	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179576811	179576811	G	A	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	missense	c.24014	p.T8005M	0.038	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMSmart_SM00406	HMMPfam_I-set,HMMSmart_SM00409,HMMSmart_SM00408,HMMPfam_Titin_Z,HMMSmart_SM00406,PatternScan_IG_MHC,HMMPfam_PPAK,HMMPfam_ig,HMMSmart_SM00060,HMMPfam_fn3,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1,HMMSmart_SM00219,HMMSmart_SM00220,HMMPfam_Pkinase,PatternScan_PROTEIN_KINASE_TYR	-	no_errors	
TTN	7273	genome.wustl.edu	37	2	179588692	179588692	+	Silent	SNP	G	G	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	2	179588692	179588692	G	C	SNP	TTN	ENST00000356127	human	ensembl	57_37b	-1	known	silent	c.17562	p.V5854	1.000	HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_I-set	HMMSmart_SM00219,HMMSmart_SM00220,PatternScan_IG_MHC,HMMSmart_SM00406,HMMSmart_SM00408,HMMSmart_SM00409,HMMPfam_fn3,HMMSmart_SM00060,HMMPfam_PPAK,PatternScan_PROTEIN_KINASE_TYR,HMMPfam_I-set,HMMPfam_ig,HMMPfam_Titin_Z,HMMPfam_Pkinase,PatternScan_FGGY_KINASES_1,PatternScan_PEROXIDASE_1	-	no_errors	
UBA1	7317	genome.wustl.edu	37	X	47070446	47070446	+	Silent	SNP	G	G	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	47070446	47070446	G	A	SNP	UBA1	NM_003334	human	genbank	57_37b	+1	reviewed	silent	c.2286	p.L762	1.000	superfamily_MoeB,HMMPfam_UBACT	superfamily_MoeB,HMMPfam_ThiF,PatternScan_UBIQUITIN_ACTIVAT_1,HMMPfam_UBA_e1_thiolCys,PatternScan_UBIQUITIN_ACTIVAT_2,HMMPfam_UBACT,HMMPfam_UBA_e1_C	-	no_errors	
UCK2	7371	genome.wustl.edu	37	1	165865513	165865513	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	165865513	165865513	T	C	SNP	UCK2	NM_012474	human	genbank	57_37b	+1	reviewed	missense	c.443	p.L148P	1.000	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_PRK	superfamily_P-loop containing nucleoside triphosphate hydrolases,HMMPfam_PRK	-	no_errors	
UHRF1BP1	54887	genome.wustl.edu	37	6	34827338	34827338	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	34827338	34827338	C	T	SNP	UHRF1BP1	NM_017754	human	genbank	57_37b	+1	validated	missense	c.3205	p.P1069S	0.968	NULL	NULL	-	no_errors	
USH2A	7399	genome.wustl.edu	37	1	216221986	216221986	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	1	216221986	216221986	A	T	SNP	USH2A	NM_206933	human	genbank	57_37b	-1	reviewed	missense	c.6053	p.I2018K	0.930	superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3	superfamily_Concanavalin A-like lectins/glucanases,HMMSmart_SM00560,HMMSmart_SM00136,HMMPfam_Laminin_N,HMMPfam_Laminin_EGF,HMMSmart_SM00180,superfamily_EGF/Laminin,PatternScan_EGF_LAM_1,PatternScan_EGF_1,superfamily_Fibronectin type III,HMMSmart_SM00060,HMMPfam_fn3,HMMSmart_SM00282,HMMPfam_Laminin_G_2	-	no_errors	
USPL1	10208	genome.wustl.edu	37	13	31221139	31221139	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	13	31221139	31221139	G	T	SNP	USPL1	NM_005800	human	genbank	57_37b	+1	validated	missense	c.1183	p.G395C	1.000	NULL	NULL	-	no_errors	
VAMP7	6845	genome.wustl.edu	37	X	155169387	155169387	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	G	G					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	X	155169387	155169387	G	T	SNP	VAMP7	NM_005638	human	genbank	57_37b	+1	validated	missense	c.524	p.S175I	1.000	HMMPfam_Synaptobrevin	superfamily_SNARE-like,HMMPfam_Synaptobrevin,PatternScan_SYNAPTOBREVIN	-	no_errors	
VN1R2	317701	genome.wustl.edu	37	19	53762388	53762388	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	A	A					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	53762388	53762388	A	G	SNP	VN1R2	NM_173856	human	genbank	57_37b	+1	validated	missense	c.760	p.S254G	0.000	superfamily_SSF81321	PatternScan_G_PROTEIN_RECEP_F1_1,superfamily_SSF81321,HMMPfam_V1R	-	no_errors	
VNN2	8875	genome.wustl.edu	37	6	133077134	133077134	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	6	133077134	133077134	C	G	SNP	VNN2	NM_004665	human	genbank	57_37b	-1	reviewed	missense	c.385	p.A129P	0.994	superfamily_Ntlse/CNhydtse,HMMPfam_CN_hydrolase	superfamily_Ntlse/CNhydtse,HMMPfam_CN_hydrolase	-	no_errors	
WDR52	55779	genome.wustl.edu	37	3	113146069	113146069	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	C	C					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	3	113146069	113146069	C	A	SNP	WDR52	NM_018338	human	genbank	57_37b	-1	validated	missense	c.218	p.S73I	0.574	NULL	superfamily_WD40_like,HMMSmart_WD40,HMMPfam_WD40,PatternScan_WD_REPEATS_1	-	no_errors	
ZNF841	284371	genome.wustl.edu	37	19	52568485	52568485	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-AN-A04D-01A-21W-A050-09	TCGA-AN-A04D-10A-01W-A055-09	T	T					Unknown	Unknown	Somatic	Phase_IV	Capture		1	dbGAP	Illumina GAIIx	19	52568485	52568485	T	A	SNP	ZNF841	NM_001136499	human	genbank	57_37b	-1	validated	nonsense	c.2650	p.K884*	0.753	superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1	superfamily_Krueppel-associated_box,HMMPfam_KRAB,HMMSmart_KRAB,superfamily_SSF57667,HMMPfam_zf-C2H2,HMMSmart_ZnF_C2H2,PatternScan_ZINC_FINGER_C2H2_1,PatternScan_IG_MHC	-	no_errors	
